P40_17045 cd4f7f636a0fd0621247888daa6bbd2b 273 Gene3D G3DSA:3.40.50.150 85 273 5.0E-56 T 13-10-2018 P40_17045 cd4f7f636a0fd0621247888daa6bbd2b 273 Pfam PF05175 Methyltransferase small domain 101 187 6.3E-15 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 P40_17045 cd4f7f636a0fd0621247888daa6bbd2b 273 SUPERFAMILY SSF53335 3 271 2.28E-55 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_17045 cd4f7f636a0fd0621247888daa6bbd2b 273 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 273 44.114 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 P40_17045 cd4f7f636a0fd0621247888daa6bbd2b 273 Gene3D G3DSA:1.10.8.10 1 84 1.2E-27 T 13-10-2018 P40_17045 cd4f7f636a0fd0621247888daa6bbd2b 273 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 269 3.7E-87 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 P40_17045 cd4f7f636a0fd0621247888daa6bbd2b 273 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 P40_17045 cd4f7f636a0fd0621247888daa6bbd2b 273 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 7 272 1.5E-72 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 P40_03060 f0ce68f2befc490ac7f933ee6b22ed50 338 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 285 327 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 P40_03060 f0ce68f2befc490ac7f933ee6b22ed50 338 SUPERFAMILY SSF46689 284 334 2.06E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_03060 f0ce68f2befc490ac7f933ee6b22ed50 338 SMART SM00342 249 331 1.0E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_03060 f0ce68f2befc490ac7f933ee6b22ed50 338 Pfam PF12833 Helix-turn-helix domain 258 332 6.6E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_03060 f0ce68f2befc490ac7f933ee6b22ed50 338 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 315 8.5E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_03060 f0ce68f2befc490ac7f933ee6b22ed50 338 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 315 331 8.5E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_03060 f0ce68f2befc490ac7f933ee6b22ed50 338 Gene3D G3DSA:1.10.10.60 229 337 2.6E-23 T 13-10-2018 P40_03060 f0ce68f2befc490ac7f933ee6b22ed50 338 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 20 205 7.8E-34 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_00740 d510207a5ceb5dca02394bdecfe3d001 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_00740 d510207a5ceb5dca02394bdecfe3d001 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_00740 d510207a5ceb5dca02394bdecfe3d001 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_00740 d510207a5ceb5dca02394bdecfe3d001 294 SUPERFAMILY SSF53850 91 292 1.09E-44 T 13-10-2018 P40_00740 d510207a5ceb5dca02394bdecfe3d001 294 Gene3D G3DSA:1.10.10.10 1 86 3.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_00740 d510207a5ceb5dca02394bdecfe3d001 294 Gene3D G3DSA:3.40.190.290 91 293 1.4E-41 T 13-10-2018 P40_00740 d510207a5ceb5dca02394bdecfe3d001 294 SUPERFAMILY SSF46785 1 111 1.67E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_00740 d510207a5ceb5dca02394bdecfe3d001 294 Pfam PF03466 LysR substrate binding domain 89 292 4.6E-50 T 13-10-2018 IPR005119 LysR, substrate-binding P40_00740 d510207a5ceb5dca02394bdecfe3d001 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.1E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_03610 79303c25b01d63b6b8a60c9589860446 494 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 10 211 22.103 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 P40_03610 79303c25b01d63b6b8a60c9589860446 494 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 431 441 - T 13-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site P40_03610 79303c25b01d63b6b8a60c9589860446 494 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 9 211 2.1E-36 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 P40_03610 79303c25b01d63b6b8a60c9589860446 494 SUPERFAMILY SSF64153 8 248 2.62E-58 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 P40_03610 79303c25b01d63b6b8a60c9589860446 494 Gene3D G3DSA:3.40.50.10260 7 218 6.9E-51 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 P40_03610 79303c25b01d63b6b8a60c9589860446 494 Pfam PF03853 YjeF-related protein N-terminus 29 190 1.1E-37 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 P40_03610 79303c25b01d63b6b8a60c9589860446 494 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 231 484 1.8E-72 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 P40_03610 79303c25b01d63b6b8a60c9589860446 494 Pfam PF01256 Carbohydrate kinase 249 484 4.0E-59 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 P40_03610 79303c25b01d63b6b8a60c9589860446 494 Gene3D G3DSA:3.40.1190.20 225 490 1.2E-82 T 13-10-2018 IPR029056 Ribokinase-like P40_03610 79303c25b01d63b6b8a60c9589860446 494 SUPERFAMILY SSF53613 226 489 1.31E-71 T 13-10-2018 IPR029056 Ribokinase-like P40_03610 79303c25b01d63b6b8a60c9589860446 494 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 226 493 22.77 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 P40_03610 79303c25b01d63b6b8a60c9589860446 494 PIRSF PIRSF017184 7 488 3.1E-127 T 13-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 P40_12050 1d4d32c03c983fb3967732d6fc676fbf 1287 SUPERFAMILY SSF52540 70 556 4.98E-101 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_12050 1d4d32c03c983fb3967732d6fc676fbf 1287 Pfam PF00271 Helicase conserved C-terminal domain 285 397 1.6E-8 T 13-10-2018 IPR001650 Helicase, C-terminal P40_12050 1d4d32c03c983fb3967732d6fc676fbf 1287 SMART SM00847 458 548 1.9E-33 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 P40_12050 1d4d32c03c983fb3967732d6fc676fbf 1287 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 10 1285 0.0 T 13-10-2018 IPR010222 RNA helicase HrpA GO:0004004 P40_12050 1d4d32c03c983fb3967732d6fc676fbf 1287 Gene3D G3DSA:3.40.50.300 245 414 4.3E-51 T 13-10-2018 P40_12050 1d4d32c03c983fb3967732d6fc676fbf 1287 Pfam PF04408 Helicase associated domain (HA2) 461 543 1.3E-17 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 P40_12050 1d4d32c03c983fb3967732d6fc676fbf 1287 SMART SM00487 67 251 1.1E-27 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_12050 1d4d32c03c983fb3967732d6fc676fbf 1287 SMART SM00490 298 398 6.7E-14 T 13-10-2018 IPR001650 Helicase, C-terminal P40_12050 1d4d32c03c983fb3967732d6fc676fbf 1287 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 611 691 1.8E-11 T 13-10-2018 IPR011709 Domain of unknown function DUF1605 P40_12050 1d4d32c03c983fb3967732d6fc676fbf 1287 Gene3D G3DSA:3.40.50.300 23 244 6.6E-75 T 13-10-2018 P40_12050 1d4d32c03c983fb3967732d6fc676fbf 1287 Pfam PF11898 Domain of unknown function (DUF3418) 705 1285 1.8E-175 T 13-10-2018 IPR024590 RNA helicase HrpA, C-terminal P40_12050 1d4d32c03c983fb3967732d6fc676fbf 1287 Pfam PF00270 DEAD/DEAH box helicase 77 225 4.8E-7 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 P40_12050 1d4d32c03c983fb3967732d6fc676fbf 1287 Gene3D G3DSA:1.20.120.1080 442 543 2.7E-18 T 13-10-2018 P40_05005 99a6e2db773fadde261f0a0f2d3a8f1d 453 Gene3D G3DSA:3.40.1190.10 92 311 3.8E-55 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 P40_05005 99a6e2db773fadde261f0a0f2d3a8f1d 453 Pfam PF08245 Mur ligase middle domain 108 291 3.8E-19 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 P40_05005 99a6e2db773fadde261f0a0f2d3a8f1d 453 Gene3D G3DSA:3.90.190.20 314 450 1.5E-24 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 P40_05005 99a6e2db773fadde261f0a0f2d3a8f1d 453 Gene3D G3DSA:3.40.50.720 1 90 7.4E-36 T 13-10-2018 P40_05005 99a6e2db773fadde261f0a0f2d3a8f1d 453 Pfam PF01225 Mur ligase family, catalytic domain 2 98 1.3E-17 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 P40_05005 99a6e2db773fadde261f0a0f2d3a8f1d 453 SUPERFAMILY SSF51984 1 90 6.93E-22 T 13-10-2018 P40_05005 99a6e2db773fadde261f0a0f2d3a8f1d 453 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 448 5.8E-211 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 P40_05005 99a6e2db773fadde261f0a0f2d3a8f1d 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 383 1.7E-9 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 P40_05005 99a6e2db773fadde261f0a0f2d3a8f1d 453 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.654 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 P40_05005 99a6e2db773fadde261f0a0f2d3a8f1d 453 SUPERFAMILY SSF53244 310 448 2.14E-36 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 P40_05005 99a6e2db773fadde261f0a0f2d3a8f1d 453 SUPERFAMILY SSF53623 99 309 8.24E-50 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 SMART SM00448 707 826 1.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 SUPERFAMILY SSF47384 331 404 3.34E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 450 564 1.2E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 SMART SM00387 450 566 9.8E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 Gene3D G3DSA:3.30.565.10 404 568 5.7E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 Gene3D G3DSA:3.40.50.2300 705 834 6.7E-32 T 13-10-2018 P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 Gene3D G3DSA:1.10.287.130 329 403 3.7E-23 T 13-10-2018 P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 SMART SM00388 338 403 3.7E-24 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 Pfam PF00072 Response regulator receiver domain 709 826 1.1E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 SUPERFAMILY SSF55874 392 563 5.76E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 SUPERFAMILY SSF52172 705 831 1.1E-31 T 13-10-2018 IPR011006 CheY-like superfamily P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 Pfam PF00512 His Kinase A (phospho-acceptor) domain 338 403 1.5E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 563 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 505 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 544 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_08445 b218bc5b8d4025f22954f1074cc4bb6a 836 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 519 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_16630 223cee9b386b9f6695ca9e104b3635b2 529 ProSitePatterns PS00455 Putative AMP-binding domain signature. 180 191 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_16630 223cee9b386b9f6695ca9e104b3635b2 529 Pfam PF13193 AMP-binding enzyme C-terminal domain 436 511 1.4E-17 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_16630 223cee9b386b9f6695ca9e104b3635b2 529 Pfam PF00501 AMP-binding enzyme 28 427 2.8E-95 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_16630 223cee9b386b9f6695ca9e104b3635b2 529 SUPERFAMILY SSF56801 16 523 8.9E-146 T 13-10-2018 P40_16630 223cee9b386b9f6695ca9e104b3635b2 529 Gene3D G3DSA:3.30.300.310 423 525 9.6E-29 T 13-10-2018 P40_16630 223cee9b386b9f6695ca9e104b3635b2 529 Gene3D G3DSA:3.40.50.12780 11 420 3.8E-114 T 13-10-2018 P40_14575 487ccc58d61f1bdb779ec0ed40d0cbf4 366 Pfam PF00691 OmpA family 253 349 7.1E-23 T 13-10-2018 IPR006665 OmpA-like domain P40_14575 487ccc58d61f1bdb779ec0ed40d0cbf4 366 ProSitePatterns PS01068 OmpA-like domain. 286 331 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 P40_14575 487ccc58d61f1bdb779ec0ed40d0cbf4 366 Gene3D G3DSA:3.30.1330.60 230 355 1.1E-35 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_14575 487ccc58d61f1bdb779ec0ed40d0cbf4 366 Pfam PF13505 Outer membrane protein beta-barrel domain 9 192 2.2E-13 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel P40_14575 487ccc58d61f1bdb779ec0ed40d0cbf4 366 PRINTS PR01021 OMPA domain signature 284 299 1.1E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_14575 487ccc58d61f1bdb779ec0ed40d0cbf4 366 PRINTS PR01021 OMPA domain signature 254 276 1.1E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_14575 487ccc58d61f1bdb779ec0ed40d0cbf4 366 PRINTS PR01021 OMPA domain signature 299 315 1.1E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_14575 487ccc58d61f1bdb779ec0ed40d0cbf4 366 SUPERFAMILY SSF56925 28 194 1.57E-11 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P40_14575 487ccc58d61f1bdb779ec0ed40d0cbf4 366 Gene3D G3DSA:2.40.160.20 27 194 1.7E-14 T 13-10-2018 P40_14575 487ccc58d61f1bdb779ec0ed40d0cbf4 366 SUPERFAMILY SSF103088 224 355 4.05E-33 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 5.5E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 5.5E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 5.5E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.5E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.5E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 5.5E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 SUPERFAMILY SSF51735 5 242 1.35E-80 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 1.4E-62 T 13-10-2018 P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 Gene3D G3DSA:3.40.50.720 1 243 2.0E-81 T 13-10-2018 P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 182 5.3E-5 T 13-10-2018 P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.2E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.2E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.2E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_13195 873f320ef75c5b768f625ff0c8ed5f64 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 241 4.8E-95 T 13-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 P40_19050 1476bf25d83fe260ae0fc47560eb268d 336 Hamap MF_00813 Probable allantoicase [alc]. 1 336 43.235 T 13-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 P40_19050 1476bf25d83fe260ae0fc47560eb268d 336 Pfam PF03561 Allantoicase repeat 25 169 3.1E-43 T 13-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 P40_19050 1476bf25d83fe260ae0fc47560eb268d 336 Pfam PF03561 Allantoicase repeat 192 333 2.5E-46 T 13-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 P40_19050 1476bf25d83fe260ae0fc47560eb268d 336 Gene3D G3DSA:2.60.120.260 174 336 1.3E-52 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily P40_19050 1476bf25d83fe260ae0fc47560eb268d 336 Gene3D G3DSA:2.60.120.260 5 173 1.3E-52 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily P40_19050 1476bf25d83fe260ae0fc47560eb268d 336 SUPERFAMILY SSF49785 178 335 1.53E-52 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily P40_19050 1476bf25d83fe260ae0fc47560eb268d 336 SUPERFAMILY SSF49785 13 171 2.21E-54 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily P40_19050 1476bf25d83fe260ae0fc47560eb268d 336 PIRSF PIRSF016516 3 336 1.2E-124 T 13-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 P40_19050 1476bf25d83fe260ae0fc47560eb268d 336 TIGRFAM TIGR02961 allantoicase: allantoicase 16 334 4.1E-125 T 13-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 Gene3D G3DSA:3.50.50.60 233 349 4.9E-114 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 Gene3D G3DSA:3.50.50.60 90 405 4.9E-114 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 PIRSF PIRSF000350 1 548 9.0E-247 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 88 405 1.1E-64 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 TIGRFAM TIGR02053 MerA: mercury(II) reductase 88 548 8.3E-180 T 13-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 SUPERFAMILY SSF55424 420 546 1.31E-33 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 Pfam PF00403 Heavy-metal-associated domain 3 45 4.3E-11 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 121 131 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 PRINTS PR00945 Mercuric reductase class II signature 456 476 3.4E-77 T 13-10-2018 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 PRINTS PR00945 Mercuric reductase class II signature 521 540 3.4E-77 T 13-10-2018 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 PRINTS PR00945 Mercuric reductase class II signature 133 152 3.4E-77 T 13-10-2018 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 PRINTS PR00945 Mercuric reductase class II signature 260 277 3.4E-77 T 13-10-2018 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 PRINTS PR00945 Mercuric reductase class II signature 225 242 3.4E-77 T 13-10-2018 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 PRINTS PR00945 Mercuric reductase class II signature 12 22 3.4E-77 T 13-10-2018 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 PRINTS PR00945 Mercuric reductase class II signature 280 295 3.4E-77 T 13-10-2018 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 PRINTS PR00945 Mercuric reductase class II signature 98 116 3.4E-77 T 13-10-2018 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 SUPERFAMILY SSF51905 89 444 9.72E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 424 530 5.0E-30 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 Gene3D G3DSA:3.30.390.30 423 548 2.0E-44 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 SUPERFAMILY SSF55008 2 69 4.19E-17 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 P40_14745 1823983b12c268e5e2eb4c4ecc1ef089 548 Gene3D G3DSA:3.30.70.100 1 67 4.5E-19 T 13-10-2018 P40_14565 b2a69263e872e0216fd6492090091fd4 1207 SUPERFAMILY SSF52540 12 843 1.77E-106 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_14565 b2a69263e872e0216fd6492090091fd4 1207 Gene3D G3DSA:3.40.50.300 458 863 4.1E-147 T 13-10-2018 P40_14565 b2a69263e872e0216fd6492090091fd4 1207 Gene3D G3DSA:1.10.486.10 599 744 4.1E-147 T 13-10-2018 P40_14565 b2a69263e872e0216fd6492090091fd4 1207 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 8 1200 0.0 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 P40_14565 b2a69263e872e0216fd6492090091fd4 1207 Gene3D G3DSA:3.40.50.300 8 447 1.2E-135 T 13-10-2018 P40_14565 b2a69263e872e0216fd6492090091fd4 1207 Gene3D G3DSA:1.10.3170.10 158 360 1.2E-135 T 13-10-2018 P40_14565 b2a69263e872e0216fd6492090091fd4 1207 Gene3D G3DSA:3.90.320.10 910 1207 4.4E-83 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal P40_14565 b2a69263e872e0216fd6492090091fd4 1207 Pfam PF13361 UvrD-like helicase C-terminal domain 701 831 1.2E-14 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 P40_14565 b2a69263e872e0216fd6492090091fd4 1207 SUPERFAMILY SSF52980 919 1201 1.07E-67 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 P40_14565 b2a69263e872e0216fd6492090091fd4 1207 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 4 1201 21.54 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 P40_14565 b2a69263e872e0216fd6492090091fd4 1207 Pfam PF00580 UvrD/REP helicase N-terminal domain 13 446 7.4E-58 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 P40_14565 b2a69263e872e0216fd6492090091fd4 1207 Pfam PF12705 PD-(D/E)XK nuclease superfamily 975 1175 2.5E-7 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 Gene3D G3DSA:2.40.50.250 483 599 4.2E-129 T 13-10-2018 P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 PRINTS PR00315 GTP-binding elongation factor signature 71 81 3.4E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 PRINTS PR00315 GTP-binding elongation factor signature 7 20 3.4E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 PRINTS PR00315 GTP-binding elongation factor signature 51 59 3.4E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 PRINTS PR00315 GTP-binding elongation factor signature 123 132 3.4E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 150 4.8E-24 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 SUPERFAMILY SSF50447 152 299 3.95E-34 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 Pfam PF00679 Elongation factor G C-terminus 397 477 1.9E-20 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 Gene3D G3DSA:3.30.70.240 389 482 4.2E-129 T 13-10-2018 P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 2.3E-54 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 Gene3D G3DSA:3.40.50.300 1 198 1.1E-67 T 13-10-2018 P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 SUPERFAMILY SSF54980 398 513 1.29E-26 T 13-10-2018 IPR035647 EF-G domain III/V-like P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 Pfam PF03144 Elongation factor Tu domain 2 219 289 7.2E-9 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 SUPERFAMILY SSF52540 2 207 8.5E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 Gene3D G3DSA:2.40.30.10 199 299 9.4E-35 T 13-10-2018 P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 Gene3D G3DSA:3.30.70.870 306 590 4.2E-129 T 13-10-2018 P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 SUPERFAMILY SSF54980 302 387 2.27E-15 T 13-10-2018 IPR035647 EF-G domain III/V-like P40_02840 8b761cf82b0a60847d2fc34e763918d8 602 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 1.7E-289 T 13-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 Pfam PF00072 Response regulator receiver domain 653 765 4.4E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 SUPERFAMILY SSF47226 748 895 4.84E-19 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 SMART SM00304 176 228 6.1E-4 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 493 1.7E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_07160 5437d305a5b49f6816218576ee9cbde1 906 SUPERFAMILY SSF52172 651 770 5.41E-39 T 13-10-2018 IPR011006 CheY-like superfamily P40_07160 5437d305a5b49f6816218576ee9cbde1 906 Gene3D G3DSA:3.30.565.10 332 497 3.8E-51 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_07160 5437d305a5b49f6816218576ee9cbde1 906 SMART SM00388 268 333 1.4E-28 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 SMART SM00387 380 496 4.6E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_07160 5437d305a5b49f6816218576ee9cbde1 906 SUPERFAMILY SSF55874 322 492 5.76E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_07160 5437d305a5b49f6816218576ee9cbde1 906 Pfam PF01627 Hpt domain 815 897 1.0E-8 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 SMART SM00448 651 765 2.7E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 Gene3D G3DSA:3.40.50.12740 650 794 1.8E-41 T 13-10-2018 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 Gene3D G3DSA:1.10.287.130 218 331 2.0E-31 T 13-10-2018 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 SUPERFAMILY SSF47384 254 334 1.37E-23 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 493 2.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 474 2.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 449 2.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 435 2.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 Gene3D G3DSA:1.20.120.160 795 905 4.7E-24 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_07160 5437d305a5b49f6816218576ee9cbde1 906 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 333 3.3E-23 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_21595 26d3231f8519a6891e36c6a5c3cb1d0d 628 Gene3D G3DSA:1.10.150.570 567 620 5.0E-25 T 13-10-2018 P40_21595 26d3231f8519a6891e36c6a5c3cb1d0d 628 Gene3D G3DSA:1.10.10.1800 459 548 6.1E-24 T 13-10-2018 P40_21595 26d3231f8519a6891e36c6a5c3cb1d0d 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 523 538 4.6E-6 T 13-10-2018 P40_21595 26d3231f8519a6891e36c6a5c3cb1d0d 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 4.6E-6 T 13-10-2018 P40_21595 26d3231f8519a6891e36c6a5c3cb1d0d 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 622 41.738 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 P40_21595 26d3231f8519a6891e36c6a5c3cb1d0d 628 Pfam PF01134 Glucose inhibited division protein A 9 398 1.6E-162 T 13-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 P40_21595 26d3231f8519a6891e36c6a5c3cb1d0d 628 Pfam PF13932 GidA associated domain 402 614 2.1E-74 T 13-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 P40_21595 26d3231f8519a6891e36c6a5c3cb1d0d 628 SMART SM01228 544 615 1.8E-44 T 13-10-2018 P40_21595 26d3231f8519a6891e36c6a5c3cb1d0d 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 P40_21595 26d3231f8519a6891e36c6a5c3cb1d0d 628 SUPERFAMILY SSF51905 7 261 6.65E-48 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_21595 26d3231f8519a6891e36c6a5c3cb1d0d 628 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 620 1.4E-270 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 P40_21595 26d3231f8519a6891e36c6a5c3cb1d0d 628 Gene3D G3DSA:3.50.50.60 296 458 2.1E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_21595 26d3231f8519a6891e36c6a5c3cb1d0d 628 Gene3D G3DSA:3.50.50.60 2 233 3.7E-87 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_21595 26d3231f8519a6891e36c6a5c3cb1d0d 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 P40_18750 df788af4cf81728919cb429f1de9ffab 640 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 Gene3D G3DSA:3.30.420.40 180 366 8.7E-165 T 13-10-2018 P40_18750 df788af4cf81728919cb429f1de9ffab 640 SUPERFAMILY SSF53067 187 382 2.66E-66 T 13-10-2018 P40_18750 df788af4cf81728919cb429f1de9ffab 640 Pfam PF00012 Hsp70 protein 4 603 1.5E-264 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 Gene3D G3DSA:1.20.1270.10 524 608 1.2E-24 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 SUPERFAMILY SSF100920 384 540 1.57E-60 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 36.59 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 P40_18750 df788af4cf81728919cb429f1de9ffab 640 Gene3D G3DSA:2.60.34.10 383 523 9.5E-66 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 Gene3D G3DSA:3.30.420.40 5 379 8.7E-165 T 13-10-2018 P40_18750 df788af4cf81728919cb429f1de9ffab 640 SUPERFAMILY SSF100934 507 604 2.55E-19 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 SUPERFAMILY SSF53067 4 184 1.02E-67 T 13-10-2018 P40_18750 df788af4cf81728919cb429f1de9ffab 640 Gene3D G3DSA:3.90.640.10 229 316 8.7E-165 T 13-10-2018 P40_18750 df788af4cf81728919cb429f1de9ffab 640 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.8E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 PRINTS PR00301 70kDa heat shock protein signature 469 485 6.8E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.8E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 PRINTS PR00301 70kDa heat shock protein signature 388 407 6.8E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 PRINTS PR00301 70kDa heat shock protein signature 334 350 6.8E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.8E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 PRINTS PR00301 70kDa heat shock protein signature 138 158 6.8E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 PRINTS PR00301 70kDa heat shock protein signature 365 385 6.8E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 PRINTS PR00301 70kDa heat shock protein signature 198 208 6.8E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_18750 df788af4cf81728919cb429f1de9ffab 640 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 6.4E-289 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 P40_13720 380449cf9e0324831a8291ecca5466ca 677 SUPERFAMILY SSF47323 388 545 5.98E-40 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_13720 380449cf9e0324831a8291ecca5466ca 677 SUPERFAMILY SSF52374 6 385 3.67E-99 T 13-10-2018 P40_13720 380449cf9e0324831a8291ecca5466ca 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 540 676 1.1E-40 T 13-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P40_13720 380449cf9e0324831a8291ecca5466ca 677 Pfam PF09334 tRNA synthetases class I (M) 8 394 5.8E-149 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_13720 380449cf9e0324831a8291ecca5466ca 677 SUPERFAMILY SSF50249 571 676 9.79E-30 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_13720 380449cf9e0324831a8291ecca5466ca 677 SUPERFAMILY SSF57770 142 176 3.4E-12 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P40_13720 380449cf9e0324831a8291ecca5466ca 677 Gene3D G3DSA:1.10.730.10 378 536 5.9E-33 T 13-10-2018 P40_13720 380449cf9e0324831a8291ecca5466ca 677 Gene3D G3DSA:3.40.50.620 8 377 3.4E-151 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_13720 380449cf9e0324831a8291ecca5466ca 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 1.1E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P40_13720 380449cf9e0324831a8291ecca5466ca 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 1.1E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P40_13720 380449cf9e0324831a8291ecca5466ca 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 1.1E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P40_13720 380449cf9e0324831a8291ecca5466ca 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 1.1E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P40_13720 380449cf9e0324831a8291ecca5466ca 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 1.1E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P40_13720 380449cf9e0324831a8291ecca5466ca 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 1.1E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P40_13720 380449cf9e0324831a8291ecca5466ca 677 Gene3D G3DSA:2.40.50.140 568 677 3.6E-31 T 13-10-2018 P40_13720 380449cf9e0324831a8291ecca5466ca 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_13720 380449cf9e0324831a8291ecca5466ca 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 532 2.7E-170 T 13-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P40_13720 380449cf9e0324831a8291ecca5466ca 677 Pfam PF01588 Putative tRNA binding domain 581 674 1.4E-21 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 P40_13720 380449cf9e0324831a8291ecca5466ca 677 Gene3D G3DSA:2.20.28.20 142 176 3.4E-151 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P40_13720 380449cf9e0324831a8291ecca5466ca 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 543 38.903 T 13-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P40_17140 580fb199878066943992eba79540c01f 209 Gene3D G3DSA:2.130.10.10 4 205 6.5E-15 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_17140 580fb199878066943992eba79540c01f 209 SUPERFAMILY SSF50969 13 206 2.9E-24 T 13-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like P40_17140 580fb199878066943992eba79540c01f 209 Pfam PF13360 PQQ-like domain 74 170 6.4E-6 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_13420 fa166c09b6b029a766da9c4272c059bc 578 Gene3D G3DSA:3.40.50.300 320 562 1.2E-70 T 13-10-2018 P40_13420 fa166c09b6b029a766da9c4272c059bc 578 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_13420 fa166c09b6b029a766da9c4272c059bc 578 SMART SM00382 354 543 1.3E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_13420 fa166c09b6b029a766da9c4272c059bc 578 Gene3D G3DSA:1.20.1560.10 10 314 6.9E-39 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 P40_13420 fa166c09b6b029a766da9c4272c059bc 578 SUPERFAMILY SSF52540 319 557 3.78E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_13420 fa166c09b6b029a766da9c4272c059bc 578 SUPERFAMILY SSF90123 14 316 2.09E-47 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 P40_13420 fa166c09b6b029a766da9c4272c059bc 578 Pfam PF00005 ABC transporter 345 495 2.0E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_13420 fa166c09b6b029a766da9c4272c059bc 578 Pfam PF00664 ABC transporter transmembrane region 23 278 2.8E-13 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 P40_13420 fa166c09b6b029a766da9c4272c059bc 578 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 14 554 2.8E-220 T 13-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 P40_09865 ba222e9504f44c3ca39801d961bae4c5 274 Gene3D G3DSA:3.40.50.720 1 274 1.2E-73 T 13-10-2018 P40_09865 ba222e9504f44c3ca39801d961bae4c5 274 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 273 4.9E-49 T 13-10-2018 P40_09865 ba222e9504f44c3ca39801d961bae4c5 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_09865 ba222e9504f44c3ca39801d961bae4c5 274 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 188 0.0025 T 13-10-2018 P40_09865 ba222e9504f44c3ca39801d961bae4c5 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 4.8E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09865 ba222e9504f44c3ca39801d961bae4c5 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 236 256 4.8E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09865 ba222e9504f44c3ca39801d961bae4c5 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.8E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09865 ba222e9504f44c3ca39801d961bae4c5 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 4.8E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09865 ba222e9504f44c3ca39801d961bae4c5 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 4.8E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09865 ba222e9504f44c3ca39801d961bae4c5 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.8E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09865 ba222e9504f44c3ca39801d961bae4c5 274 SUPERFAMILY SSF51735 4 274 6.72E-73 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_09865 ba222e9504f44c3ca39801d961bae4c5 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09865 ba222e9504f44c3ca39801d961bae4c5 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09865 ba222e9504f44c3ca39801d961bae4c5 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06610 0c97a66e99114d09927dd8fc660d9aa4 433 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 127 9.0E-21 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 P40_06610 0c97a66e99114d09927dd8fc660d9aa4 433 SUPERFAMILY SSF55347 135 300 1.24E-52 T 13-10-2018 P40_06610 0c97a66e99114d09927dd8fc660d9aa4 433 Pfam PF01842 ACT domain 352 416 2.5E-15 T 13-10-2018 IPR002912 ACT domain P40_06610 0c97a66e99114d09927dd8fc660d9aa4 433 SUPERFAMILY SSF51735 2 156 4.14E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_06610 0c97a66e99114d09927dd8fc660d9aa4 433 Gene3D G3DSA:3.30.360.10 134 346 7.8E-163 T 13-10-2018 P40_06610 0c97a66e99114d09927dd8fc660d9aa4 433 Gene3D G3DSA:3.30.70.260 347 419 7.8E-163 T 13-10-2018 P40_06610 0c97a66e99114d09927dd8fc660d9aa4 433 PIRSF PIRSF000098 1 431 2.2E-160 T 13-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 P40_06610 0c97a66e99114d09927dd8fc660d9aa4 433 Gene3D G3DSA:3.40.50.720 4 338 7.8E-163 T 13-10-2018 P40_06610 0c97a66e99114d09927dd8fc660d9aa4 433 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 181 203 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 P40_06610 0c97a66e99114d09927dd8fc660d9aa4 433 SUPERFAMILY SSF55021 351 419 7.45E-14 T 13-10-2018 P40_06610 0c97a66e99114d09927dd8fc660d9aa4 433 Pfam PF00742 Homoserine dehydrogenase 135 313 4.3E-64 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 P40_16030 67646708c19fce0bdf9f651428b72a70 564 PRINTS PR01009 Flagellar M-ring protein signature 272 290 1.7E-41 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 P40_16030 67646708c19fce0bdf9f651428b72a70 564 PRINTS PR01009 Flagellar M-ring protein signature 203 221 1.7E-41 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 P40_16030 67646708c19fce0bdf9f651428b72a70 564 PRINTS PR01009 Flagellar M-ring protein signature 359 383 1.7E-41 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 P40_16030 67646708c19fce0bdf9f651428b72a70 564 PRINTS PR01009 Flagellar M-ring protein signature 160 174 1.7E-41 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 P40_16030 67646708c19fce0bdf9f651428b72a70 564 PRINTS PR01009 Flagellar M-ring protein signature 128 146 1.7E-41 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 P40_16030 67646708c19fce0bdf9f651428b72a70 564 Gene3D G3DSA:3.30.300.30 129 230 3.7E-8 T 13-10-2018 P40_16030 67646708c19fce0bdf9f651428b72a70 564 PIRSF PIRSF004862 9 563 3.7E-157 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 P40_16030 67646708c19fce0bdf9f651428b72a70 564 Pfam PF08345 Flagellar M-ring protein C-terminal 259 435 3.3E-46 T 13-10-2018 IPR013556 Flagellar M-ring C-terminal P40_16030 67646708c19fce0bdf9f651428b72a70 564 Pfam PF01514 Secretory protein of YscJ/FliF family 38 227 2.2E-71 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF P40_16030 67646708c19fce0bdf9f651428b72a70 564 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 20 561 4.1E-130 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 P40_12015 3b771b28a884235a826c1a497af01316 359 Gene3D G3DSA:3.90.1200.10 123 357 1.5E-78 T 13-10-2018 P40_12015 3b771b28a884235a826c1a497af01316 359 Pfam PF01636 Phosphotransferase enzyme family 42 280 6.7E-54 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase P40_12015 3b771b28a884235a826c1a497af01316 359 SUPERFAMILY SSF56112 21 329 5.71E-60 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_12015 3b771b28a884235a826c1a497af01316 359 Gene3D G3DSA:3.30.200.20 20 122 3.0E-40 T 13-10-2018 P40_04940 38a4d86670c0a351436864ac0a62b554 208 Gene3D G3DSA:3.40.50.2020 2 208 4.3E-72 T 13-10-2018 P40_04940 38a4d86670c0a351436864ac0a62b554 208 SUPERFAMILY SSF53271 5 206 1.19E-64 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like P40_04940 38a4d86670c0a351436864ac0a62b554 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 3.3E-67 T 13-10-2018 P40_04940 38a4d86670c0a351436864ac0a62b554 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 43.831 T 13-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 P40_04940 38a4d86670c0a351436864ac0a62b554 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 2.4E-86 T 13-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 P40_04570 cc6630e9a4469edfdb6a1933a0ff6be2 273 Pfam PF00106 short chain dehydrogenase 1 188 3.5E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04570 cc6630e9a4469edfdb6a1933a0ff6be2 273 Gene3D G3DSA:3.40.50.720 1 248 1.4E-64 T 13-10-2018 P40_04570 cc6630e9a4469edfdb6a1933a0ff6be2 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 1.1E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04570 cc6630e9a4469edfdb6a1933a0ff6be2 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 1.1E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04570 cc6630e9a4469edfdb6a1933a0ff6be2 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.1E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04570 cc6630e9a4469edfdb6a1933a0ff6be2 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_04570 cc6630e9a4469edfdb6a1933a0ff6be2 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.8E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04570 cc6630e9a4469edfdb6a1933a0ff6be2 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 2.8E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04570 cc6630e9a4469edfdb6a1933a0ff6be2 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 2.8E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04570 cc6630e9a4469edfdb6a1933a0ff6be2 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 2.8E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04570 cc6630e9a4469edfdb6a1933a0ff6be2 273 SUPERFAMILY SSF51735 2 258 4.48E-61 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_09695 1f15b1c57a1f35f3827f27167418c079 136 Gene3D G3DSA:3.10.129.10 6 136 1.7E-33 T 13-10-2018 P40_09695 1f15b1c57a1f35f3827f27167418c079 136 SUPERFAMILY SSF54637 6 132 3.03E-30 T 13-10-2018 IPR029069 HotDog domain superfamily P40_09695 1f15b1c57a1f35f3827f27167418c079 136 Pfam PF03061 Thioesterase superfamily 48 124 1.6E-15 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_09695 1f15b1c57a1f35f3827f27167418c079 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 131 1.2E-22 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 P40_09205 52342a533ab9f62c8e9ffc00f63b8850 342 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 224 252 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 P40_09205 52342a533ab9f62c8e9ffc00f63b8850 342 Gene3D G3DSA:3.40.1390.10 1 96 1.9E-29 T 13-10-2018 P40_09205 52342a533ab9f62c8e9ffc00f63b8850 342 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 328 5.3E-114 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 P40_09205 52342a533ab9f62c8e9ffc00f63b8850 342 Gene3D G3DSA:2.160.10.10 99 307 1.2E-59 T 13-10-2018 P40_09205 52342a533ab9f62c8e9ffc00f63b8850 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 153 178 2.2E-6 T 13-10-2018 IPR001451 Hexapeptide repeat P40_09205 52342a533ab9f62c8e9ffc00f63b8850 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 148 7.5E-6 T 13-10-2018 IPR001451 Hexapeptide repeat P40_09205 52342a533ab9f62c8e9ffc00f63b8850 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 221 256 3.1E-5 T 13-10-2018 IPR001451 Hexapeptide repeat P40_09205 52342a533ab9f62c8e9ffc00f63b8850 342 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 21 88 1.6E-23 T 13-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 P40_09205 52342a533ab9f62c8e9ffc00f63b8850 342 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 8 325 36.148 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 P40_09205 52342a533ab9f62c8e9ffc00f63b8850 342 SUPERFAMILY SSF51161 33 316 2.28E-80 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily P40_07800 d0d96acb69d53ac3b3f1ea1635352fd8 287 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 274 1.8E-44 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_20555 ab1e3c708e58d729981eb31be56e4ec2 293 Gene3D G3DSA:1.10.12.10 215 271 2.7E-8 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_20555 ab1e3c708e58d729981eb31be56e4ec2 293 Gene3D G3DSA:3.90.226.10 1 211 8.7E-65 T 13-10-2018 P40_20555 ab1e3c708e58d729981eb31be56e4ec2 293 SUPERFAMILY SSF52096 3 273 9.79E-76 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_20555 ab1e3c708e58d729981eb31be56e4ec2 293 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 272 8.5E-55 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_18060 e30cb181a535197eee1a245047dcfbb3 701 Pfam PF03958 Bacterial type II/III secretion system short domain 124 181 1.8E-7 T 13-10-2018 IPR005644 NolW-like P40_18060 e30cb181a535197eee1a245047dcfbb3 701 Pfam PF03958 Bacterial type II/III secretion system short domain 187 260 2.5E-12 T 13-10-2018 IPR005644 NolW-like P40_18060 e30cb181a535197eee1a245047dcfbb3 701 Pfam PF03958 Bacterial type II/III secretion system short domain 266 355 1.2E-16 T 13-10-2018 IPR005644 NolW-like P40_18060 e30cb181a535197eee1a245047dcfbb3 701 Gene3D G3DSA:3.30.1370.120 263 353 1.3E-16 T 13-10-2018 IPR038591 NolW-like superfamily P40_18060 e30cb181a535197eee1a245047dcfbb3 701 Pfam PF00263 Bacterial type II and III secretion system protein 440 603 9.9E-50 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 P40_18060 e30cb181a535197eee1a245047dcfbb3 701 Gene3D G3DSA:3.30.1370.120 185 258 1.2E-17 T 13-10-2018 IPR038591 NolW-like superfamily P40_18060 e30cb181a535197eee1a245047dcfbb3 701 Gene3D G3DSA:3.30.1370.120 19 182 1.6E-57 T 13-10-2018 IPR038591 NolW-like superfamily P40_18060 e30cb181a535197eee1a245047dcfbb3 701 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 28 613 3.7E-165 T 13-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 P40_18060 e30cb181a535197eee1a245047dcfbb3 701 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 549 582 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 P40_18060 e30cb181a535197eee1a245047dcfbb3 701 PRINTS PR00811 Bacterial general secretion pathway protein D signature 591 605 5.0E-37 T 13-10-2018 IPR001775 GspD/PilQ family P40_18060 e30cb181a535197eee1a245047dcfbb3 701 PRINTS PR00811 Bacterial general secretion pathway protein D signature 471 481 5.0E-37 T 13-10-2018 IPR001775 GspD/PilQ family P40_18060 e30cb181a535197eee1a245047dcfbb3 701 PRINTS PR00811 Bacterial general secretion pathway protein D signature 436 460 5.0E-37 T 13-10-2018 IPR001775 GspD/PilQ family P40_18060 e30cb181a535197eee1a245047dcfbb3 701 PRINTS PR00811 Bacterial general secretion pathway protein D signature 568 586 5.0E-37 T 13-10-2018 IPR001775 GspD/PilQ family P40_18060 e30cb181a535197eee1a245047dcfbb3 701 PRINTS PR00811 Bacterial general secretion pathway protein D signature 355 365 5.0E-37 T 13-10-2018 IPR001775 GspD/PilQ family P40_11350 a799f4b19e9e7960a4abb427f9e57b8d 228 Pfam PF07729 FCD domain 84 210 6.3E-28 T 13-10-2018 IPR011711 GntR, C-terminal P40_11350 a799f4b19e9e7960a4abb427f9e57b8d 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.6E-19 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_11350 a799f4b19e9e7960a4abb427f9e57b8d 228 Gene3D G3DSA:1.10.10.10 8 75 1.7E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_11350 a799f4b19e9e7960a4abb427f9e57b8d 228 Gene3D G3DSA:1.20.120.530 77 220 3.6E-34 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_11350 a799f4b19e9e7960a4abb427f9e57b8d 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 4.4E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_11350 a799f4b19e9e7960a4abb427f9e57b8d 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 4.4E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_11350 a799f4b19e9e7960a4abb427f9e57b8d 228 SMART SM00895 84 211 1.6E-25 T 13-10-2018 IPR011711 GntR, C-terminal P40_11350 a799f4b19e9e7960a4abb427f9e57b8d 228 SUPERFAMILY SSF46785 10 100 6.58E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_11350 a799f4b19e9e7960a4abb427f9e57b8d 228 SUPERFAMILY SSF48008 80 217 9.94E-29 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_11350 a799f4b19e9e7960a4abb427f9e57b8d 228 SMART SM00345 16 74 2.3E-20 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_20365 186562677be9b6f7c2730a8dc87d2d66 495 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 393 4.7E-90 T 13-10-2018 IPR000523 Magnesium chelatase ChlI domain P40_20365 186562677be9b6f7c2730a8dc87d2d66 495 Gene3D G3DSA:3.40.50.300 190 493 2.9E-54 T 13-10-2018 P40_20365 186562677be9b6f7c2730a8dc87d2d66 495 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 9.4E-43 T 13-10-2018 P40_20365 186562677be9b6f7c2730a8dc87d2d66 495 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 490 5.3E-173 T 13-10-2018 IPR004482 Mg chelatase-related protein P40_20365 186562677be9b6f7c2730a8dc87d2d66 495 SMART SM00382 210 391 4.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_20365 186562677be9b6f7c2730a8dc87d2d66 495 SUPERFAMILY SSF52540 191 491 3.66E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_20365 186562677be9b6f7c2730a8dc87d2d66 495 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 490 6.6E-26 T 13-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain P40_20365 186562677be9b6f7c2730a8dc87d2d66 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 340 352 7.7E-5 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 P40_20365 186562677be9b6f7c2730a8dc87d2d66 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.7E-5 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 P40_20365 186562677be9b6f7c2730a8dc87d2d66 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 7.7E-5 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 P40_20365 186562677be9b6f7c2730a8dc87d2d66 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 7.7E-5 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 P40_20365 186562677be9b6f7c2730a8dc87d2d66 495 SUPERFAMILY SSF54211 7 168 1.86E-30 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_08795 4e9343abb058030e447f84707c26760f 409 Pfam PF00175 Oxidoreductase NAD-binding domain 279 388 3.5E-17 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 P40_08795 4e9343abb058030e447f84707c26760f 409 Gene3D G3DSA:3.10.20.30 36 127 7.9E-29 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_08795 4e9343abb058030e447f84707c26760f 409 SUPERFAMILY SSF52343 259 404 5.37E-37 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_08795 4e9343abb058030e447f84707c26760f 409 SUPERFAMILY SSF54292 43 126 1.15E-21 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 P40_08795 4e9343abb058030e447f84707c26760f 409 Pfam PF00970 Oxidoreductase FAD-binding domain 200 268 3.4E-10 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 P40_08795 4e9343abb058030e447f84707c26760f 409 SUPERFAMILY SSF63380 107 274 1.7E-36 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel P40_08795 4e9343abb058030e447f84707c26760f 409 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 116 4.6E-9 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 P40_08795 4e9343abb058030e447f84707c26760f 409 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 5 409 4.2E-225 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 P40_08795 4e9343abb058030e447f84707c26760f 409 Gene3D G3DSA:3.40.50.80 277 395 2.8E-32 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_08795 4e9343abb058030e447f84707c26760f 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 375 383 6.0E-7 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_08795 4e9343abb058030e447f84707c26760f 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 244 253 6.0E-7 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_08795 4e9343abb058030e447f84707c26760f 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 316 327 6.0E-7 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_08795 4e9343abb058030e447f84707c26760f 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 211 218 6.0E-7 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_08795 4e9343abb058030e447f84707c26760f 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 278 297 6.0E-7 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_08795 4e9343abb058030e447f84707c26760f 409 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 304 313 6.0E-7 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_08795 4e9343abb058030e447f84707c26760f 409 Gene3D G3DSA:2.40.30.10 128 266 4.4E-53 T 13-10-2018 P40_08795 4e9343abb058030e447f84707c26760f 409 PIRSF PIRSF000044 1 409 1.9E-219 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 P40_08795 4e9343abb058030e447f84707c26760f 409 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 3 409 65.329 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 P40_03390 42ee21a9424eec3550caf56be4622f40 261 SUPERFAMILY SSF63380 4 123 1.02E-12 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel P40_03390 42ee21a9424eec3550caf56be4622f40 261 Gene3D G3DSA:2.40.30.10 2 120 2.4E-36 T 13-10-2018 P40_03390 42ee21a9424eec3550caf56be4622f40 261 Pfam PF08021 Siderophore-interacting FAD-binding domain 10 119 1.5E-33 T 13-10-2018 IPR013113 FAD-binding 9, siderophore-interacting P40_03390 42ee21a9424eec3550caf56be4622f40 261 Gene3D G3DSA:3.40.50.80 121 261 1.6E-49 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_03390 42ee21a9424eec3550caf56be4622f40 261 Pfam PF04954 Siderophore-interacting protein 127 244 1.3E-33 T 13-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain P40_08935 188606105d6e25d4bba139159146be49 118 Pfam PF03960 ArsC family 7 114 2.1E-14 T 13-10-2018 IPR006660 Arsenate reductase-like P40_08935 188606105d6e25d4bba139159146be49 118 Gene3D G3DSA:3.40.30.10 1 118 1.9E-45 T 13-10-2018 P40_08935 188606105d6e25d4bba139159146be49 118 SUPERFAMILY SSF52833 5 116 1.23E-29 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_08935 188606105d6e25d4bba139159146be49 118 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 116 2.1E-44 T 13-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 P40_03525 8f99f963eb78b88bb2a272b8fa5b8cc1 509 SUPERFAMILY SSF52540 260 491 5.12E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03525 8f99f963eb78b88bb2a272b8fa5b8cc1 509 SUPERFAMILY SSF52540 10 224 1.74E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03525 8f99f963eb78b88bb2a272b8fa5b8cc1 509 SMART SM00382 30 218 1.1E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_03525 8f99f963eb78b88bb2a272b8fa5b8cc1 509 SMART SM00382 286 482 6.9 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_03525 8f99f963eb78b88bb2a272b8fa5b8cc1 509 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_03525 8f99f963eb78b88bb2a272b8fa5b8cc1 509 Gene3D G3DSA:3.40.50.300 4 250 1.1E-48 T 13-10-2018 P40_03525 8f99f963eb78b88bb2a272b8fa5b8cc1 509 Gene3D G3DSA:3.40.50.300 261 506 1.3E-39 T 13-10-2018 P40_03525 8f99f963eb78b88bb2a272b8fa5b8cc1 509 Pfam PF00005 ABC transporter 21 169 4.4E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_03525 8f99f963eb78b88bb2a272b8fa5b8cc1 509 Pfam PF00005 ABC transporter 278 432 5.1E-16 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_05275 0e93718e9ce2e14003220a7400e77bbc 476 Pfam PF02562 PhoH-like protein 266 460 1.3E-46 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 P40_05275 0e93718e9ce2e14003220a7400e77bbc 476 Gene3D G3DSA:3.40.50.1010 15 171 2.3E-25 T 13-10-2018 P40_05275 0e93718e9ce2e14003220a7400e77bbc 476 SMART SM00670 21 155 2.4E-8 T 13-10-2018 IPR002716 PIN domain P40_05275 0e93718e9ce2e14003220a7400e77bbc 476 Pfam PF13638 PIN domain 23 168 4.8E-37 T 13-10-2018 IPR002716 PIN domain P40_05275 0e93718e9ce2e14003220a7400e77bbc 476 Gene3D G3DSA:3.40.50.300 264 474 4.1E-60 T 13-10-2018 P40_05275 0e93718e9ce2e14003220a7400e77bbc 476 SUPERFAMILY SSF88723 20 169 1.67E-13 T 13-10-2018 IPR029060 PIN-like domain superfamily P40_05275 0e93718e9ce2e14003220a7400e77bbc 476 SUPERFAMILY SSF52540 222 456 1.73E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_13495 d04fc7900ee9001ff3945c1cbc8900a0 343 Gene3D G3DSA:3.40.190.10 121 267 2.4E-63 T 13-10-2018 P40_13495 d04fc7900ee9001ff3945c1cbc8900a0 343 Gene3D G3DSA:3.40.190.10 34 330 2.4E-63 T 13-10-2018 P40_13495 d04fc7900ee9001ff3945c1cbc8900a0 343 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 12 330 2.2E-48 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_13495 d04fc7900ee9001ff3945c1cbc8900a0 343 Pfam PF16868 NMT1-like family 34 330 1.1E-53 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_13495 d04fc7900ee9001ff3945c1cbc8900a0 343 SUPERFAMILY SSF53850 30 331 7.53E-52 T 13-10-2018 P40_07835 22e13968fcd65af161372fd54b1ec30f 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 1.4E-15 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_07835 22e13968fcd65af161372fd54b1ec30f 379 Gene3D G3DSA:1.20.140.10 233 374 6.8E-33 T 13-10-2018 P40_07835 22e13968fcd65af161372fd54b1ec30f 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 237 368 7.5E-24 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_07835 22e13968fcd65af161372fd54b1ec30f 379 SUPERFAMILY SSF56645 1 224 2.62E-50 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_07835 22e13968fcd65af161372fd54b1ec30f 379 Gene3D G3DSA:2.40.110.10 122 232 3.9E-23 T 13-10-2018 P40_07835 22e13968fcd65af161372fd54b1ec30f 379 Gene3D G3DSA:1.10.540.10 1 119 8.3E-29 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_07835 22e13968fcd65af161372fd54b1ec30f 379 SUPERFAMILY SSF47203 233 371 1.61E-35 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_07835 22e13968fcd65af161372fd54b1ec30f 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 215 1.0E-14 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_20540 c435c35a008dbd6a568be02497d05029 319 Pfam PF01636 Phosphotransferase enzyme family 17 269 9.3E-33 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase P40_20540 c435c35a008dbd6a568be02497d05029 319 SUPERFAMILY SSF56112 7 299 1.26E-39 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_20540 c435c35a008dbd6a568be02497d05029 319 Gene3D G3DSA:3.90.1200.10 99 304 2.9E-47 T 13-10-2018 P40_07985 e28fdc416fe73d9993e820842f2edc74 402 SUPERFAMILY SSF53901 3 274 2.57E-68 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_07985 e28fdc416fe73d9993e820842f2edc74 402 Pfam PF02803 Thiolase, C-terminal domain 277 399 4.5E-44 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_07985 e28fdc416fe73d9993e820842f2edc74 402 Pfam PF00108 Thiolase, N-terminal domain 5 267 2.5E-66 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 P40_07985 e28fdc416fe73d9993e820842f2edc74 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 1.6E-128 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_07985 e28fdc416fe73d9993e820842f2edc74 402 Gene3D G3DSA:3.40.47.10 6 281 2.9E-143 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_07985 e28fdc416fe73d9993e820842f2edc74 402 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 P40_07985 e28fdc416fe73d9993e820842f2edc74 402 SUPERFAMILY SSF53901 277 399 1.58E-44 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_07985 e28fdc416fe73d9993e820842f2edc74 402 PIRSF PIRSF000429 1 401 5.7E-125 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_07985 e28fdc416fe73d9993e820842f2edc74 402 Gene3D G3DSA:3.40.47.10 140 397 2.9E-143 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_07985 e28fdc416fe73d9993e820842f2edc74 402 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 P40_19940 8aef5b8d8629fc13fda5f2fd99029ec3 354 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 3.8E-118 T 13-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 P40_19940 8aef5b8d8629fc13fda5f2fd99029ec3 354 Gene3D G3DSA:2.40.50.140 281 325 9.5E-6 T 13-10-2018 P40_19940 8aef5b8d8629fc13fda5f2fd99029ec3 354 Pfam PF08402 TOBE domain 276 339 2.1E-7 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 P40_19940 8aef5b8d8629fc13fda5f2fd99029ec3 354 SUPERFAMILY SSF52540 3 243 2.86E-87 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_19940 8aef5b8d8629fc13fda5f2fd99029ec3 354 SUPERFAMILY SSF50331 240 344 9.64E-11 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal P40_19940 8aef5b8d8629fc13fda5f2fd99029ec3 354 Gene3D G3DSA:2.40.50.940 226 280 9.5E-6 T 13-10-2018 P40_19940 8aef5b8d8629fc13fda5f2fd99029ec3 354 SMART SM00382 27 214 6.7E-22 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_19940 8aef5b8d8629fc13fda5f2fd99029ec3 354 Gene3D G3DSA:3.40.50.300 1 225 3.1E-74 T 13-10-2018 P40_19940 8aef5b8d8629fc13fda5f2fd99029ec3 354 Pfam PF00005 ABC transporter 18 164 3.4E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_19940 8aef5b8d8629fc13fda5f2fd99029ec3 354 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_15555 d31d91f1c0b5305c88a2134d70977fcb 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 423 1.3E-83 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_15555 d31d91f1c0b5305c88a2134d70977fcb 429 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 19 427 4.6E-105 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_15555 d31d91f1c0b5305c88a2134d70977fcb 429 PIRSF PIRSF006066 1 429 5.1E-104 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_01705 bbf2c9f5b002708491fb9e3e19859dec 400 Gene3D G3DSA:1.20.140.10 240 396 8.2E-39 T 13-10-2018 P40_01705 bbf2c9f5b002708491fb9e3e19859dec 400 Gene3D G3DSA:1.10.540.10 1 120 6.3E-31 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_01705 bbf2c9f5b002708491fb9e3e19859dec 400 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 380 2.7E-34 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_01705 bbf2c9f5b002708491fb9e3e19859dec 400 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 220 1.5E-13 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_01705 bbf2c9f5b002708491fb9e3e19859dec 400 SUPERFAMILY SSF47203 231 385 3.06E-40 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_01705 bbf2c9f5b002708491fb9e3e19859dec 400 Gene3D G3DSA:2.40.110.10 121 239 3.6E-31 T 13-10-2018 P40_01705 bbf2c9f5b002708491fb9e3e19859dec 400 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_01705 bbf2c9f5b002708491fb9e3e19859dec 400 SUPERFAMILY SSF56645 1 245 3.01E-65 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_01705 bbf2c9f5b002708491fb9e3e19859dec 400 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 1.6E-25 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_15945 8750ee5e40a4bea729be4971e9a12754 415 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 359 7.3E-53 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_15945 8750ee5e40a4bea729be4971e9a12754 415 SMART SM00283 144 391 1.6E-92 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_15945 8750ee5e40a4bea729be4971e9a12754 415 Gene3D G3DSA:1.10.287.950 91 393 3.2E-93 T 13-10-2018 P40_15945 8750ee5e40a4bea729be4971e9a12754 415 SUPERFAMILY SSF58104 111 393 3.14E-75 T 13-10-2018 P40_15945 8750ee5e40a4bea729be4971e9a12754 415 SMART SM00304 91 143 3.6E-12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_15945 8750ee5e40a4bea729be4971e9a12754 415 Pfam PF00672 HAMP domain 93 139 7.1E-12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_05180 8c4d91dad5c00c1647cf7966f3b4f596 489 Gene3D G3DSA:3.60.110.10 240 463 1.1E-10 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P40_05180 8c4d91dad5c00c1647cf7966f3b4f596 489 Pfam PF00795 Carbon-nitrogen hydrolase 279 453 1.6E-20 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 P40_05180 8c4d91dad5c00c1647cf7966f3b4f596 489 SUPERFAMILY SSF56317 209 467 1.57E-36 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P40_05180 8c4d91dad5c00c1647cf7966f3b4f596 489 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 1 472 21.789 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 P40_05180 8c4d91dad5c00c1647cf7966f3b4f596 489 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 54 434 1.4E-94 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 P40_15315 bae132d73f1c5ca626e827fbb13057f9 367 Gene3D G3DSA:3.30.70.270 201 366 1.4E-53 T 13-10-2018 P40_15315 bae132d73f1c5ca626e827fbb13057f9 367 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 206 365 1.0E-46 T 13-10-2018 IPR000160 GGDEF domain P40_15315 bae132d73f1c5ca626e827fbb13057f9 367 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 363 3.8E-43 T 13-10-2018 IPR000160 GGDEF domain P40_15315 bae132d73f1c5ca626e827fbb13057f9 367 SMART SM00267 196 367 1.6E-57 T 13-10-2018 IPR000160 GGDEF domain P40_15315 bae132d73f1c5ca626e827fbb13057f9 367 SUPERFAMILY SSF55073 212 365 3.06E-47 T 13-10-2018 IPR029787 Nucleotide cyclase P40_20355 d14a81a0839776a76ebde3ed6dc374a8 636 SMART SM00849 104 326 2.2E-22 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_20355 d14a81a0839776a76ebde3ed6dc374a8 636 Pfam PF14864 Alkyl sulfatase C-terminal 511 632 7.3E-34 T 13-10-2018 IPR029229 Alkyl sulfatase, C-terminal P40_20355 d14a81a0839776a76ebde3ed6dc374a8 636 Gene3D G3DSA:3.60.15.30 2 361 2.8E-161 T 13-10-2018 P40_20355 d14a81a0839776a76ebde3ed6dc374a8 636 Pfam PF00753 Metallo-beta-lactamase superfamily 100 326 1.7E-36 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_20355 d14a81a0839776a76ebde3ed6dc374a8 636 Gene3D G3DSA:3.30.1050.10 506 634 4.4E-40 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily P40_20355 d14a81a0839776a76ebde3ed6dc374a8 636 Gene3D G3DSA:1.25.40.880 362 503 7.7E-62 T 13-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily P40_20355 d14a81a0839776a76ebde3ed6dc374a8 636 SUPERFAMILY SSF56281 4 505 7.42E-153 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_20355 d14a81a0839776a76ebde3ed6dc374a8 636 SUPERFAMILY SSF55718 512 632 2.19E-32 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily P40_20355 d14a81a0839776a76ebde3ed6dc374a8 636 Pfam PF14863 Alkyl sulfatase dimerisation 363 502 3.1E-62 T 13-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 P40_17230 bccfea7789f2ce13b132d6ea42636f51 398 Pfam PF00155 Aminotransferase class I and II 40 389 2.7E-63 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_17230 bccfea7789f2ce13b132d6ea42636f51 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 242 255 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 P40_17230 bccfea7789f2ce13b132d6ea42636f51 398 Gene3D G3DSA:3.90.1150.10 35 389 2.7E-117 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_17230 bccfea7789f2ce13b132d6ea42636f51 398 SUPERFAMILY SSF53383 16 393 2.55E-110 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_17230 bccfea7789f2ce13b132d6ea42636f51 398 Gene3D G3DSA:3.40.640.10 71 292 2.7E-117 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_11150 b5659bcf12836d1bcc2951e013c82b13 213 Pfam PF04279 Intracellular septation protein A 1 185 3.3E-53 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 P40_11150 b5659bcf12836d1bcc2951e013c82b13 213 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 186 15.921 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 P40_15960 2005f5335b7a9f625b1bb5aa744a0c56 286 Gene3D G3DSA:3.30.1330.60 108 285 4.5E-55 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_15960 2005f5335b7a9f625b1bb5aa744a0c56 286 Pfam PF00691 OmpA family 159 249 3.2E-12 T 13-10-2018 IPR006665 OmpA-like domain P40_15960 2005f5335b7a9f625b1bb5aa744a0c56 286 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 64 3.4E-17 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain P40_15960 2005f5335b7a9f625b1bb5aa744a0c56 286 SUPERFAMILY SSF103088 146 263 1.22E-20 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 Pfam PF07549 SecD/SecF GG Motif 559 576 5.5E-4 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 Pfam PF07549 SecD/SecF GG Motif 44 62 6.5E-5 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 46 501 1.3E-132 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 Gene3D G3DSA:3.30.1360.200 204 332 5.4E-57 T 13-10-2018 P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 516 41.946 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 Gene3D G3DSA:1.20.1640.10 624 822 6.8E-14 T 13-10-2018 P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 559 802 7.6E-66 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 Gene3D G3DSA:1.20.1640.10 350 517 3.1E-15 T 13-10-2018 P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 531 813 24.467 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 Pfam PF02355 Protein export membrane protein 627 811 1.5E-55 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 Pfam PF02355 Protein export membrane protein 335 501 5.2E-17 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 264 494 6.6E-75 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 SUPERFAMILY SSF82866 311 509 5.23E-44 T 13-10-2018 P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 Gene3D G3DSA:3.30.70.3400 147 333 5.4E-57 T 13-10-2018 P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 SUPERFAMILY SSF82866 634 814 2.49E-35 T 13-10-2018 P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 PRINTS PR01755 Bacterial translocase SecF protein signature 558 573 2.9E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 PRINTS PR01755 Bacterial translocase SecF protein signature 750 765 2.9E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 PRINTS PR01755 Bacterial translocase SecF protein signature 670 684 2.9E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 PRINTS PR01755 Bacterial translocase SecF protein signature 718 736 2.9E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P40_11715 7a9faa06cc7dacaccb27e5c914b289eb 827 Gene3D G3DSA:1.20.1640.10 518 553 3.1E-15 T 13-10-2018 P40_13155 9e78b2cf9c0ef83098515769a52c5da3 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 197 213 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 P40_13155 9e78b2cf9c0ef83098515769a52c5da3 265 Gene3D G3DSA:3.20.20.140 6 264 1.1E-92 T 13-10-2018 P40_13155 9e78b2cf9c0ef83098515769a52c5da3 265 Pfam PF01026 TatD related DNase 9 261 4.2E-79 T 13-10-2018 IPR001130 TatD family GO:0016788 P40_13155 9e78b2cf9c0ef83098515769a52c5da3 265 SUPERFAMILY SSF51556 8 262 3.15E-89 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_13155 9e78b2cf9c0ef83098515769a52c5da3 265 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 8 261 1.1E-84 T 13-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 P40_13155 9e78b2cf9c0ef83098515769a52c5da3 265 PIRSF PIRSF005902 1 265 1.5E-78 T 13-10-2018 IPR001130 TatD family GO:0016788 P40_13155 9e78b2cf9c0ef83098515769a52c5da3 265 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 132 142 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 P40_13155 9e78b2cf9c0ef83098515769a52c5da3 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 8 16 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 P40_21265 630f4c646504287bee6133b86ed70019 422 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 181 419 1.9E-63 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 P40_21265 630f4c646504287bee6133b86ed70019 422 SUPERFAMILY SSF161098 198 407 3.79E-37 T 13-10-2018 IPR035906 MetI-like superfamily P40_21265 630f4c646504287bee6133b86ed70019 422 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 220 419 3.7E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_21265 630f4c646504287bee6133b86ed70019 422 Pfam PF11812 Domain of unknown function (DUF3333) 9 151 2.6E-52 T 13-10-2018 IPR024573 Domain of unknown function DUF3333 P40_21265 630f4c646504287bee6133b86ed70019 422 Gene3D G3DSA:1.10.3720.10 196 421 7.7E-34 T 13-10-2018 IPR035906 MetI-like superfamily P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 SUPERFAMILY SSF51230 1126 1195 1.31E-19 T 13-10-2018 IPR011053 Single hybrid motif P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 Gene3D G3DSA:2.40.100.10 630 785 1.2E-62 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1195 0.0 T 13-10-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 SMART SM00878 338 446 2.4E-49 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 SUPERFAMILY SSF51246 332 448 7.32E-36 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.5E-42 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 Pfam PF02785 Biotin carboxylase C-terminal domain 338 446 5.1E-34 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 SMART SM00797 477 767 6.8E-175 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 SUPERFAMILY SSF52440 1 112 1.29E-44 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 SUPERFAMILY SSF56059 83 352 1.5E-66 T 13-10-2018 P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 802 1023 8.6E-50 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 478 751 1.2E-91 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 Gene3D G3DSA:3.30.470.130 1 450 2.4E-181 T 13-10-2018 P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 Pfam PF00364 Biotin-requiring enzyme 1131 1195 2.6E-18 T 13-10-2018 IPR000089 Biotin/lipoyl attachment P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 SUPERFAMILY SSF50891 631 757 7.59E-33 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 SMART SM00796 800 1031 8.5E-117 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 SUPERFAMILY SSF50891 917 1047 4.93E-25 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 319 1.2E-64 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 Gene3D G3DSA:2.40.50.100 1130 1196 1.6E-23 T 13-10-2018 P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 Gene3D G3DSA:2.40.100.10 883 1105 2.6E-94 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 SUPERFAMILY SSF160467 802 893 1.96E-20 T 13-10-2018 P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 Gene3D G3DSA:3.30.1360.40 786 882 3.0E-30 T 13-10-2018 P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_05525 bd19cb68011e093b749fed3e35e9eee4 1196 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 454 772 3.6E-93 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B P40_01600 8f922d95910dd34103161a1b90d1ada5 279 Gene3D G3DSA:1.10.287.70 123 225 2.1E-35 T 13-10-2018 P40_01600 8f922d95910dd34103161a1b90d1ada5 279 Pfam PF00520 Ion transport protein 24 234 6.8E-43 T 13-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 P40_01600 8f922d95910dd34103161a1b90d1ada5 279 SUPERFAMILY SSF81324 23 233 1.33E-32 T 13-10-2018 P40_01600 8f922d95910dd34103161a1b90d1ada5 279 Gene3D G3DSA:1.20.120.350 11 121 8.6E-28 T 13-10-2018 IPR027359 Voltage-dependent channel domain superfamily P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 Pfam PF00403 Heavy-metal-associated domain 92 152 5.2E-10 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 SUPERFAMILY SSF81653 321 404 6.93E-17 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 84 2.7E-15 T 13-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 SUPERFAMILY SSF55008 84 158 7.46E-13 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 ProSitePatterns PS01047 Heavy-metal-associated domain. 94 123 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 785 7.1E-96 T 13-10-2018 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 Gene3D G3DSA:3.30.70.100 90 156 1.4E-11 T 13-10-2018 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 717 1.8E-18 T 13-10-2018 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 356 370 1.8E-18 T 13-10-2018 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 1.8E-18 T 13-10-2018 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 504 518 1.8E-18 T 13-10-2018 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 607 618 1.8E-18 T 13-10-2018 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 701 1.8E-18 T 13-10-2018 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 SUPERFAMILY SSF81665 253 489 3.27E-6 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 SUPERFAMILY SSF56784 503 781 2.09E-40 T 13-10-2018 IPR036412 HAD-like superfamily P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 Gene3D G3DSA:3.40.1110.10 514 614 4.8E-48 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 278 517 1.9E-29 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 591 759 8.8E-26 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 Gene3D G3DSA:3.40.50.1000 485 719 4.8E-48 T 13-10-2018 IPR023214 HAD superfamily P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 Gene3D G3DSA:2.70.150.20 300 411 9.8E-22 T 13-10-2018 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 244 783 4.3E-121 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 506 512 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 Pfam PF00122 E1-E2 ATPase 318 481 7.2E-38 T 13-10-2018 P40_11005 45ce5bc52872827c79d0707ea42d6e74 792 Pfam PF00702 haloacid dehalogenase-like hydrolase 500 695 1.1E-19 T 13-10-2018 P40_05880 6673605dbd2464e5c33853211c1681ea 340 Pfam PF02810 SEC-C motif 8 25 3.7E-9 T 13-10-2018 IPR004027 SEC-C motif P40_05880 6673605dbd2464e5c33853211c1681ea 340 Gene3D G3DSA:3.10.450.50 1 26 2.8E-7 T 13-10-2018 P40_05880 6673605dbd2464e5c33853211c1681ea 340 SUPERFAMILY SSF103642 6 26 1.37E-7 T 13-10-2018 P40_15905 c8708061399b116d72908f39117566da 690 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 1.4E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 P40_15905 c8708061399b116d72908f39117566da 690 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 238 252 1.4E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 P40_15905 c8708061399b116d72908f39117566da 690 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 157 175 1.4E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 P40_15905 c8708061399b116d72908f39117566da 690 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 187 204 1.4E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 P40_15905 c8708061399b116d72908f39117566da 690 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 138 154 1.4E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 P40_15905 c8708061399b116d72908f39117566da 690 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 1.4E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 P40_15905 c8708061399b116d72908f39117566da 690 Pfam PF00771 FHIPEP family 27 677 1.6E-266 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 P40_15905 c8708061399b116d72908f39117566da 690 Gene3D G3DSA:1.10.490.80 593 686 6.1E-7 T 13-10-2018 P40_15905 c8708061399b116d72908f39117566da 690 Gene3D G3DSA:3.40.30.60 358 501 1.8E-49 T 13-10-2018 P40_15905 c8708061399b116d72908f39117566da 690 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 18 683 9.6E-267 T 13-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 P40_15905 c8708061399b116d72908f39117566da 690 PIRSF PIRSF005419 9 690 3.0E-245 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 P40_15905 c8708061399b116d72908f39117566da 690 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 143 166 - T 13-10-2018 IPR025505 FHIPEP conserved site P40_15905 c8708061399b116d72908f39117566da 690 Gene3D G3DSA:1.10.8.540 502 590 5.8E-26 T 13-10-2018 P40_12065 c613ee0969087eb65f4c6e1c1cd5a852 675 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 263 482 2.3E-31 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF P40_12065 c613ee0969087eb65f4c6e1c1cd5a852 675 Gene3D G3DSA:3.40.190.10 347 442 1.8E-61 T 13-10-2018 P40_12065 c613ee0969087eb65f4c6e1c1cd5a852 675 Gene3D G3DSA:3.40.190.10 118 213 4.5E-31 T 13-10-2018 P40_12065 c613ee0969087eb65f4c6e1c1cd5a852 675 Gene3D G3DSA:3.40.190.10 27 238 4.5E-31 T 13-10-2018 P40_12065 c613ee0969087eb65f4c6e1c1cd5a852 675 SUPERFAMILY SSF53955 504 669 1.75E-36 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily P40_12065 c613ee0969087eb65f4c6e1c1cd5a852 675 Gene3D G3DSA:3.40.190.10 256 476 1.8E-61 T 13-10-2018 P40_12065 c613ee0969087eb65f4c6e1c1cd5a852 675 Gene3D G3DSA:1.10.530.10 502 675 3.8E-36 T 13-10-2018 P40_12065 c613ee0969087eb65f4c6e1c1cd5a852 675 SUPERFAMILY SSF53850 60 238 3.95E-28 T 13-10-2018 P40_12065 c613ee0969087eb65f4c6e1c1cd5a852 675 Pfam PF01464 Transglycosylase SLT domain 508 619 1.1E-19 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 P40_12065 c613ee0969087eb65f4c6e1c1cd5a852 675 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 60 237 2.2E-20 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF P40_12065 c613ee0969087eb65f4c6e1c1cd5a852 675 SMART SM00062 50 252 2.7E-12 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF P40_12065 c613ee0969087eb65f4c6e1c1cd5a852 675 SMART SM00062 261 485 1.2E-28 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF P40_12065 c613ee0969087eb65f4c6e1c1cd5a852 675 SUPERFAMILY SSF53850 262 483 7.25E-40 T 13-10-2018 P40_08660 ae6b19052fac84c94564c0faecb753e7 220 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 53 69 - T 13-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site P40_08660 ae6b19052fac84c94564c0faecb753e7 220 SUPERFAMILY SSF51206 12 113 2.23E-17 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like P40_08660 ae6b19052fac84c94564c0faecb753e7 220 Pfam PF00027 Cyclic nucleotide-binding domain 47 112 1.7E-10 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_08660 ae6b19052fac84c94564c0faecb753e7 220 Gene3D G3DSA:2.60.120.10 1 162 2.1E-18 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_02435 f1d04737f53aa90e9ec60601f3d8e900 785 Gene3D G3DSA:2.140.10.10 541 774 9.9E-31 T 13-10-2018 P40_02435 f1d04737f53aa90e9ec60601f3d8e900 785 Gene3D G3DSA:2.140.10.10 132 540 5.8E-116 T 13-10-2018 P40_02435 f1d04737f53aa90e9ec60601f3d8e900 785 SMART SM00564 329 370 0.16 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_02435 f1d04737f53aa90e9ec60601f3d8e900 785 SMART SM00564 693 726 320.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_02435 f1d04737f53aa90e9ec60601f3d8e900 785 SMART SM00564 273 304 290.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_02435 f1d04737f53aa90e9ec60601f3d8e900 785 SMART SM00564 185 216 0.1 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_02435 f1d04737f53aa90e9ec60601f3d8e900 785 SMART SM00564 398 448 24.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_02435 f1d04737f53aa90e9ec60601f3d8e900 785 Pfam PF13360 PQQ-like domain 274 378 3.1E-6 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_02435 f1d04737f53aa90e9ec60601f3d8e900 785 SUPERFAMILY SSF50998 134 764 1.44E-140 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily P40_02435 f1d04737f53aa90e9ec60601f3d8e900 785 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 2 773 1.1E-301 T 13-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 P40_02435 f1d04737f53aa90e9ec60601f3d8e900 785 Pfam PF01011 PQQ enzyme repeat 646 678 2.7E-4 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_02435 f1d04737f53aa90e9ec60601f3d8e900 785 Pfam PF01011 PQQ enzyme repeat 432 458 2.0E-5 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 Gene3D G3DSA:3.40.190.80 144 272 1.4E-33 T 13-10-2018 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 Gene3D G3DSA:3.30.540.10 2 143 1.5E-51 T 13-10-2018 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 216 230 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 PRINTS PR01959 SuhB family inositol monophosphatase signature 203 215 7.8E-25 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 PRINTS PR01959 SuhB family inositol monophosphatase signature 161 187 7.8E-25 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 PRINTS PR01959 SuhB family inositol monophosphatase signature 107 126 7.8E-25 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 7.8E-25 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 SUPERFAMILY SSF56655 4 266 4.45E-84 T 13-10-2018 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 1.5E-61 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 1.5E-61 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 1.5E-61 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 182 203 1.5E-61 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 1.5E-61 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 1.5E-61 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 Pfam PF00459 Inositol monophosphatase family 7 260 4.0E-66 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P40_17200 6f1dd6c07c46851e3e09f6f0fd90b902 273 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site P40_17945 6b74cd3ff820f797f62f5280b5770901 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 27.937 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_17945 6b74cd3ff820f797f62f5280b5770901 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.4E-40 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_17945 6b74cd3ff820f797f62f5280b5770901 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 13-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_17945 6b74cd3ff820f797f62f5280b5770901 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 5.0E-13 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_17945 6b74cd3ff820f797f62f5280b5770901 86 SUPERFAMILY SSF110324 2 81 4.53E-33 T 13-10-2018 P40_17945 6b74cd3ff820f797f62f5280b5770901 86 Gene3D G3DSA:2.40.50.100 20 86 8.6E-29 T 13-10-2018 P40_17945 6b74cd3ff820f797f62f5280b5770901 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.4E-36 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_17945 6b74cd3ff820f797f62f5280b5770901 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.4E-36 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_17945 6b74cd3ff820f797f62f5280b5770901 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.4E-36 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_17945 6b74cd3ff820f797f62f5280b5770901 86 Pfam PF01016 Ribosomal L27 protein 2 81 2.9E-37 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_05105 bf0677b09a59770c76508332fbfe3eeb 643 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 239 1.4E-41 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 P40_05105 bf0677b09a59770c76508332fbfe3eeb 643 Gene3D G3DSA:3.30.1390.30 85 161 1.1E-44 T 13-10-2018 P40_05105 bf0677b09a59770c76508332fbfe3eeb 643 Pfam PF00905 Penicillin binding protein transpeptidase domain 271 602 1.4E-68 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 P40_05105 bf0677b09a59770c76508332fbfe3eeb 643 SUPERFAMILY SSF56519 56 253 5.49E-48 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 P40_05105 bf0677b09a59770c76508332fbfe3eeb 643 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 3 609 49.368 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P40_05105 bf0677b09a59770c76508332fbfe3eeb 643 SUPERFAMILY SSF56601 254 605 2.25E-96 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like P40_05105 bf0677b09a59770c76508332fbfe3eeb 643 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 605 7.5E-227 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P40_05105 bf0677b09a59770c76508332fbfe3eeb 643 Gene3D G3DSA:3.90.1310.10 64 249 1.1E-44 T 13-10-2018 P40_05105 bf0677b09a59770c76508332fbfe3eeb 643 Gene3D G3DSA:3.40.710.10 253 614 6.0E-96 T 13-10-2018 P40_11020 3f09b6dd0c0c2df1a3c2fb3078bacdbe 303 Gene3D G3DSA:1.10.760.10 181 274 3.2E-68 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_11020 3f09b6dd0c0c2df1a3c2fb3078bacdbe 303 Gene3D G3DSA:1.20.58.1490 1 94 1.7E-33 T 13-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily P40_11020 3f09b6dd0c0c2df1a3c2fb3078bacdbe 303 Gene3D G3DSA:1.10.760.10 102 297 3.2E-68 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_11020 3f09b6dd0c0c2df1a3c2fb3078bacdbe 303 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 35 298 2.4E-76 T 13-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III P40_11020 3f09b6dd0c0c2df1a3c2fb3078bacdbe 303 PIRSF PIRSF000006 1 301 1.0E-93 T 13-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III P40_11020 3f09b6dd0c0c2df1a3c2fb3078bacdbe 303 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 38 82 3.3E-22 T 13-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal P40_11020 3f09b6dd0c0c2df1a3c2fb3078bacdbe 303 SUPERFAMILY SSF46626 55 212 1.4E-30 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_11020 3f09b6dd0c0c2df1a3c2fb3078bacdbe 303 SUPERFAMILY SSF46626 218 297 4.51E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_11020 3f09b6dd0c0c2df1a3c2fb3078bacdbe 303 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 128 202 3.1E-11 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_11020 3f09b6dd0c0c2df1a3c2fb3078bacdbe 303 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 228 294 2.4E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_03345 7d6ad724ddf6fd8a193c668c8cf3f4cf 89 Pfam PF05957 Bacterial protein of unknown function (DUF883) 5 89 8.2E-12 T 13-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 P40_07940 4b6e4fe5e7c7e694db533b999c6775c9 385 Gene3D G3DSA:2.40.110.10 126 236 7.0E-38 T 13-10-2018 P40_07940 4b6e4fe5e7c7e694db533b999c6775c9 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 122 6.4E-20 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_07940 4b6e4fe5e7c7e694db533b999c6775c9 385 SUPERFAMILY SSF56645 14 243 2.23E-72 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_07940 4b6e4fe5e7c7e694db533b999c6775c9 385 SUPERFAMILY SSF47203 232 383 8.05E-18 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_07940 4b6e4fe5e7c7e694db533b999c6775c9 385 Gene3D G3DSA:1.10.540.10 9 121 2.6E-26 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_07940 4b6e4fe5e7c7e694db533b999c6775c9 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 220 7.8E-23 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_07940 4b6e4fe5e7c7e694db533b999c6775c9 385 Gene3D G3DSA:1.20.140.10 237 385 4.7E-30 T 13-10-2018 P40_07940 4b6e4fe5e7c7e694db533b999c6775c9 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 381 6.0E-15 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_12530 ca23760ebe72d80c4fba3f82765c211a 251 SUPERFAMILY SSF51735 7 250 5.29E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_12530 ca23760ebe72d80c4fba3f82765c211a 251 Gene3D G3DSA:3.40.50.720 2 251 1.9E-62 T 13-10-2018 P40_12530 ca23760ebe72d80c4fba3f82765c211a 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 4.9E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12530 ca23760ebe72d80c4fba3f82765c211a 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 4.9E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12530 ca23760ebe72d80c4fba3f82765c211a 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 4.9E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12530 ca23760ebe72d80c4fba3f82765c211a 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 249 4.2E-47 T 13-10-2018 P40_12530 ca23760ebe72d80c4fba3f82765c211a 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 4.0E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12530 ca23760ebe72d80c4fba3f82765c211a 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.0E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12530 ca23760ebe72d80c4fba3f82765c211a 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.0E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12530 ca23760ebe72d80c4fba3f82765c211a 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 4.0E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12530 ca23760ebe72d80c4fba3f82765c211a 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 4.0E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04125 fef9c8304cdb3e79cf6b065ba6a1c815 338 Gene3D G3DSA:2.60.40.1090 198 338 1.1E-32 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 P40_04125 fef9c8304cdb3e79cf6b065ba6a1c815 338 SUPERFAMILY SSF49401 193 338 1.09E-26 T 13-10-2018 IPR008966 Adhesion domain superfamily P40_04125 fef9c8304cdb3e79cf6b065ba6a1c815 338 SUPERFAMILY SSF49401 30 162 3.73E-5 T 13-10-2018 IPR008966 Adhesion domain superfamily P40_04125 fef9c8304cdb3e79cf6b065ba6a1c815 338 Gene3D G3DSA:2.60.40.3310 29 197 1.2E-47 T 13-10-2018 P40_04125 fef9c8304cdb3e79cf6b065ba6a1c815 338 Pfam PF00419 Fimbrial protein 192 337 1.1E-15 T 13-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 P40_16435 4700c2f97b4e7213b22f99bb9c8884d2 320 Pfam PF07478 D-ala D-ala ligase C-terminus 112 303 2.9E-59 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_16435 4700c2f97b4e7213b22f99bb9c8884d2 320 Gene3D G3DSA:3.30.1490.20 120 184 4.0E-74 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_16435 4700c2f97b4e7213b22f99bb9c8884d2 320 Gene3D G3DSA:3.40.50.20 8 93 6.2E-29 T 13-10-2018 P40_16435 4700c2f97b4e7213b22f99bb9c8884d2 320 SUPERFAMILY SSF52440 15 105 8.34E-26 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_16435 4700c2f97b4e7213b22f99bb9c8884d2 320 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 249 277 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_16435 4700c2f97b4e7213b22f99bb9c8884d2 320 SUPERFAMILY SSF56059 105 310 2.02E-56 T 13-10-2018 P40_16435 4700c2f97b4e7213b22f99bb9c8884d2 320 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 15 305 3.7E-99 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_16435 4700c2f97b4e7213b22f99bb9c8884d2 320 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 72 83 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_16435 4700c2f97b4e7213b22f99bb9c8884d2 320 Gene3D G3DSA:3.30.470.20 94 302 4.0E-74 T 13-10-2018 P40_16435 4700c2f97b4e7213b22f99bb9c8884d2 320 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 14 307 34.888 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_16435 4700c2f97b4e7213b22f99bb9c8884d2 320 PIRSF PIRSF039102 12 57 4.6E-7 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_16435 4700c2f97b4e7213b22f99bb9c8884d2 320 PIRSF PIRSF039102 47 314 5.6E-86 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_16435 4700c2f97b4e7213b22f99bb9c8884d2 320 Pfam PF01820 D-ala D-ala ligase N-terminus 60 95 3.5E-10 T 13-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_05985 a2c1756cc81eb99ba6ea5c21557be75f 252 Pfam PF00557 Metallopeptidase family M24 15 239 3.4E-44 T 13-10-2018 IPR000994 Peptidase M24 P40_05985 a2c1756cc81eb99ba6ea5c21557be75f 252 Hamap MF_01974 Methionine aminopeptidase [map]. 1 248 32.736 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 P40_05985 a2c1756cc81eb99ba6ea5c21557be75f 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 1.2E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 P40_05985 a2c1756cc81eb99ba6ea5c21557be75f 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 1.2E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 P40_05985 a2c1756cc81eb99ba6ea5c21557be75f 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 1.2E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 P40_05985 a2c1756cc81eb99ba6ea5c21557be75f 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 158 170 1.2E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 P40_05985 a2c1756cc81eb99ba6ea5c21557be75f 252 Gene3D G3DSA:3.90.230.10 1 250 1.4E-77 T 13-10-2018 P40_05985 a2c1756cc81eb99ba6ea5c21557be75f 252 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 246 1.7E-78 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 P40_05985 a2c1756cc81eb99ba6ea5c21557be75f 252 SUPERFAMILY SSF55920 6 248 1.83E-63 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like P40_15005 483eb4a62b2a2232c2896f0fd18317da 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P40_15005 483eb4a62b2a2232c2896f0fd18317da 239 Gene3D G3DSA:3.30.470.20 85 220 1.1E-92 T 13-10-2018 P40_15005 483eb4a62b2a2232c2896f0fd18317da 239 Pfam PF01259 SAICAR synthetase 7 229 2.0E-64 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P40_15005 483eb4a62b2a2232c2896f0fd18317da 239 SUPERFAMILY SSF56104 3 232 3.27E-80 T 13-10-2018 P40_15005 483eb4a62b2a2232c2896f0fd18317da 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P40_15005 483eb4a62b2a2232c2896f0fd18317da 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 31.017 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P40_15005 483eb4a62b2a2232c2896f0fd18317da 239 Gene3D G3DSA:3.30.200.20 7 231 1.1E-92 T 13-10-2018 P40_15005 483eb4a62b2a2232c2896f0fd18317da 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 233 3.3E-78 T 13-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 P40_12130 bc711a1b62de382dad11316f18820b39 140 SUPERFAMILY SSF57716 97 135 3.28E-7 T 13-10-2018 P40_12130 bc711a1b62de382dad11316f18820b39 140 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 95 129 1.8E-8 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 P40_12130 bc711a1b62de382dad11316f18820b39 140 Gene3D G3DSA:1.20.120.910 5 138 1.1E-34 T 13-10-2018 P40_12130 bc711a1b62de382dad11316f18820b39 140 SUPERFAMILY SSF109635 7 96 6.67E-20 T 13-10-2018 IPR037187 DksA, N-terminal domain superfamily P40_17080 8c7f680dd2b8512f2e1ab7a0066bdac4 319 SMART SM01400 4 121 1.3E-75 T 13-10-2018 P40_17080 8c7f680dd2b8512f2e1ab7a0066bdac4 319 Gene3D G3DSA:3.40.50.2020 7 302 1.3E-133 T 13-10-2018 P40_17080 8c7f680dd2b8512f2e1ab7a0066bdac4 319 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 48.987 T 13-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 P40_17080 8c7f680dd2b8512f2e1ab7a0066bdac4 319 SUPERFAMILY SSF53271 69 306 2.09E-66 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like P40_17080 8c7f680dd2b8512f2e1ab7a0066bdac4 319 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 13-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 P40_17080 8c7f680dd2b8512f2e1ab7a0066bdac4 319 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 313 2.5E-28 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 P40_17080 8c7f680dd2b8512f2e1ab7a0066bdac4 319 Gene3D G3DSA:3.40.50.2020 148 290 1.3E-133 T 13-10-2018 P40_17080 8c7f680dd2b8512f2e1ab7a0066bdac4 319 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 8.7E-48 T 13-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 P40_17080 8c7f680dd2b8512f2e1ab7a0066bdac4 319 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 314 3.4E-120 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 P40_12235 c9f598c5a4337c814363e3206822987d 241 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 27 183 4.2E-18 T 13-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system P40_01720 62cf270d0f0590bda36f4548ce20ebc1 144 SUPERFAMILY SSF54427 8 123 4.17E-21 T 13-10-2018 IPR032710 NTF2-like domain superfamily P40_01720 62cf270d0f0590bda36f4548ce20ebc1 144 Gene3D G3DSA:3.10.450.50 5 123 2.6E-20 T 13-10-2018 P40_01720 62cf270d0f0590bda36f4548ce20ebc1 144 Pfam PF12680 SnoaL-like domain 10 108 1.9E-14 T 13-10-2018 IPR037401 SnoaL-like domain P40_15620 0456c6d2a430b2f244402c61c8dc04b3 252 Pfam PF00857 Isochorismatase family 46 229 2.0E-36 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 P40_15620 0456c6d2a430b2f244402c61c8dc04b3 252 SUPERFAMILY SSF52499 27 235 1.7E-45 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_15620 0456c6d2a430b2f244402c61c8dc04b3 252 Gene3D G3DSA:3.40.50.850 30 252 1.2E-51 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_14725 56332240b02a1f8c6c15d635b2c7dae8 333 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 21 179 5.5E-40 T 13-10-2018 IPR017482 Putative phage-type endonuclease P40_14725 56332240b02a1f8c6c15d635b2c7dae8 333 Pfam PF09588 YqaJ-like viral recombinase domain 27 170 2.8E-34 T 13-10-2018 IPR019080 YqaJ viral recombinase P40_14725 56332240b02a1f8c6c15d635b2c7dae8 333 SUPERFAMILY SSF52980 26 216 3.0E-32 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 P40_14725 56332240b02a1f8c6c15d635b2c7dae8 333 Gene3D G3DSA:3.90.320.10 24 218 8.1E-38 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal P40_20550 840bf1b1b353a1b29a6459f40f114a62 267 SUPERFAMILY SSF51735 12 264 3.08E-73 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_20550 840bf1b1b353a1b29a6459f40f114a62 267 Gene3D G3DSA:3.40.50.720 2 266 5.5E-75 T 13-10-2018 P40_20550 840bf1b1b353a1b29a6459f40f114a62 267 Pfam PF00106 short chain dehydrogenase 18 213 3.7E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20550 840bf1b1b353a1b29a6459f40f114a62 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 157 185 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_20550 840bf1b1b353a1b29a6459f40f114a62 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 2.3E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20550 840bf1b1b353a1b29a6459f40f114a62 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 2.3E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20550 840bf1b1b353a1b29a6459f40f114a62 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 2.3E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20550 840bf1b1b353a1b29a6459f40f114a62 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 189 2.3E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20550 840bf1b1b353a1b29a6459f40f114a62 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 2.3E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20550 840bf1b1b353a1b29a6459f40f114a62 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 2.3E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20550 840bf1b1b353a1b29a6459f40f114a62 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 189 6.0E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20550 840bf1b1b353a1b29a6459f40f114a62 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 6.0E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20550 840bf1b1b353a1b29a6459f40f114a62 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 6.0E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 Gene3D G3DSA:2.40.37.10 18 406 1.3E-149 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 367 2.7E-24 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 PRINTS PR01181 Diaminopimelate decarboxylase signature 377 399 3.6E-31 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 3.6E-31 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 PRINTS PR01181 Diaminopimelate decarboxylase signature 297 315 3.6E-31 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 3.6E-31 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 SUPERFAMILY SSF51419 26 281 3.53E-81 T 13-10-2018 IPR029066 PLP-binding barrel P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 228 241 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 410 42.092 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 279 3.0E-72 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 409 5.7E-161 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 SUPERFAMILY SSF50621 257 411 7.74E-52 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 6.6E-25 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 367 380 6.6E-25 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 6.6E-25 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 6.6E-25 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 6.6E-25 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 P40_19540 c119ed1fa51b5d017aa0a4c70db00018 413 Gene3D G3DSA:3.20.20.10 34 274 1.3E-149 T 13-10-2018 IPR029066 PLP-binding barrel P40_02910 893040de9b7c89116ac3565857a14416 159 Pfam PF11220 Protein of unknown function (DUF3015) 20 159 1.9E-54 T 13-10-2018 IPR021383 Protein of unknown function DUF3015 P40_03255 05b1e2d8835c7dcb2cbe0d3c733e9a32 692 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 423 3.0E-22 T 13-10-2018 IPR000160 GGDEF domain P40_03255 05b1e2d8835c7dcb2cbe0d3c733e9a32 692 SMART SM00052 443 685 9.3E-31 T 13-10-2018 IPR001633 EAL domain P40_03255 05b1e2d8835c7dcb2cbe0d3c733e9a32 692 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 142 251 2.6E-8 T 13-10-2018 IPR000014 PAS domain P40_03255 05b1e2d8835c7dcb2cbe0d3c733e9a32 692 Gene3D G3DSA:3.20.20.450 446 689 4.9E-54 T 13-10-2018 IPR035919 EAL domain superfamily P40_03255 05b1e2d8835c7dcb2cbe0d3c733e9a32 692 Pfam PF00989 PAS fold 146 250 3.2E-5 T 13-10-2018 IPR013767 PAS fold GO:0006355 P40_03255 05b1e2d8835c7dcb2cbe0d3c733e9a32 692 SUPERFAMILY SSF141868 451 681 7.45E-46 T 13-10-2018 IPR035919 EAL domain superfamily P40_03255 05b1e2d8835c7dcb2cbe0d3c733e9a32 692 Gene3D G3DSA:3.30.450.20 129 254 1.9E-12 T 13-10-2018 P40_03255 05b1e2d8835c7dcb2cbe0d3c733e9a32 692 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 422 6.1E-19 T 13-10-2018 IPR000160 GGDEF domain P40_03255 05b1e2d8835c7dcb2cbe0d3c733e9a32 692 Gene3D G3DSA:3.30.70.270 259 435 2.3E-35 T 13-10-2018 P40_03255 05b1e2d8835c7dcb2cbe0d3c733e9a32 692 Pfam PF00563 EAL domain 451 680 1.1E-47 T 13-10-2018 IPR001633 EAL domain P40_03255 05b1e2d8835c7dcb2cbe0d3c733e9a32 692 SUPERFAMILY SSF55785 132 251 2.26E-13 T 13-10-2018 IPR035965 PAS domain superfamily P40_03255 05b1e2d8835c7dcb2cbe0d3c733e9a32 692 SUPERFAMILY SSF52172 7 135 1.7E-8 T 13-10-2018 IPR011006 CheY-like superfamily P40_03255 05b1e2d8835c7dcb2cbe0d3c733e9a32 692 SMART SM00267 259 431 6.1E-25 T 13-10-2018 IPR000160 GGDEF domain P40_03255 05b1e2d8835c7dcb2cbe0d3c733e9a32 692 SUPERFAMILY SSF55073 276 425 4.0E-27 T 13-10-2018 IPR029787 Nucleotide cyclase P40_12980 a9b16dab110871a075880125c7b5fccf 591 Gene3D G3DSA:4.10.80.40 551 591 2.6E-21 T 13-10-2018 P40_12980 a9b16dab110871a075880125c7b5fccf 591 PIRSF PIRSF000171 1 583 1.3E-41 T 13-10-2018 P40_12980 a9b16dab110871a075880125c7b5fccf 591 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 591 7.1E-39 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12980 a9b16dab110871a075880125c7b5fccf 591 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 13-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12980 a9b16dab110871a075880125c7b5fccf 591 Gene3D G3DSA:1.20.58.100 435 550 2.9E-40 T 13-10-2018 P40_12980 a9b16dab110871a075880125c7b5fccf 591 SUPERFAMILY SSF46977 455 591 5.1E-48 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12980 a9b16dab110871a075880125c7b5fccf 591 Gene3D G3DSA:3.90.700.10 248 351 3.4E-160 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12980 a9b16dab110871a075880125c7b5fccf 591 Gene3D G3DSA:3.50.50.60 9 419 3.4E-160 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_12980 a9b16dab110871a075880125c7b5fccf 591 SUPERFAMILY SSF51905 5 434 1.63E-74 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_12980 a9b16dab110871a075880125c7b5fccf 591 Pfam PF00890 FAD binding domain 9 408 1.1E-118 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12980 a9b16dab110871a075880125c7b5fccf 591 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 7 591 5.0E-288 T 13-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12980 a9b16dab110871a075880125c7b5fccf 591 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 591 1.7E-249 T 13-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12980 a9b16dab110871a075880125c7b5fccf 591 SUPERFAMILY SSF56425 239 357 1.79E-41 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 Gene3D G3DSA:3.40.50.2300 459 586 2.3E-5 T 13-10-2018 P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 SUPERFAMILY SSF55874 267 438 8.12E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 SMART SM00448 607 723 3.0E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 SUPERFAMILY SSF52172 607 729 2.13E-38 T 13-10-2018 IPR011006 CheY-like superfamily P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 Gene3D G3DSA:3.30.565.10 277 446 3.1E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 439 5.3E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 SUPERFAMILY SSF47384 216 277 9.22E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 Gene3D G3DSA:1.10.287.130 190 275 9.9E-18 T 13-10-2018 P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 Pfam PF00072 Response regulator receiver domain 610 723 4.9E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 Gene3D G3DSA:3.40.50.12740 606 742 1.7E-42 T 13-10-2018 P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 9.8E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 438 9.8E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 9.8E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 Pfam PF00512 His Kinase A (phospho-acceptor) domain 217 276 3.9E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 SMART SM00387 325 441 5.3E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 SMART SM00388 213 278 6.3E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_11840 c4576a1d5eb6a04da8300cf423b4c6c6 742 SUPERFAMILY SSF52172 455 584 2.05E-5 T 13-10-2018 IPR011006 CheY-like superfamily P40_20075 b24938d4de872d0706d9fccc220c3f65 182 SUPERFAMILY SSF52499 1 178 3.4E-44 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_20075 b24938d4de872d0706d9fccc220c3f65 182 Gene3D G3DSA:3.40.50.850 2 181 2.2E-51 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_20075 b24938d4de872d0706d9fccc220c3f65 182 Pfam PF00857 Isochorismatase family 8 158 5.6E-28 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 P40_11995 e09155292caf9c54fe8f0937ccd52cd0 259 SUPERFAMILY SSF51735 7 258 1.06E-76 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_11995 e09155292caf9c54fe8f0937ccd52cd0 259 Gene3D G3DSA:3.40.50.720 3 258 4.2E-80 T 13-10-2018 P40_11995 e09155292caf9c54fe8f0937ccd52cd0 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_11995 e09155292caf9c54fe8f0937ccd52cd0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11995 e09155292caf9c54fe8f0937ccd52cd0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11995 e09155292caf9c54fe8f0937ccd52cd0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 1.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11995 e09155292caf9c54fe8f0937ccd52cd0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11995 e09155292caf9c54fe8f0937ccd52cd0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11995 e09155292caf9c54fe8f0937ccd52cd0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11995 e09155292caf9c54fe8f0937ccd52cd0 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 5.0E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11995 e09155292caf9c54fe8f0937ccd52cd0 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 5.0E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11995 e09155292caf9c54fe8f0937ccd52cd0 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 256 7.2E-61 T 13-10-2018 P40_04235 34f853ca6c6cbb8dfa198791c2f202b2 460 SUPERFAMILY SSF47323 343 459 1.05E-29 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_04235 34f853ca6c6cbb8dfa198791c2f202b2 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 38.157 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 P40_04235 34f853ca6c6cbb8dfa198791c2f202b2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 221 242 6.5E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 P40_04235 34f853ca6c6cbb8dfa198791c2f202b2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 190 208 6.5E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 P40_04235 34f853ca6c6cbb8dfa198791c2f202b2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 6.5E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 P40_04235 34f853ca6c6cbb8dfa198791c2f202b2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 6.5E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 P40_04235 34f853ca6c6cbb8dfa198791c2f202b2 460 Gene3D G3DSA:1.20.120.640 305 460 2.6E-35 T 13-10-2018 P40_04235 34f853ca6c6cbb8dfa198791c2f202b2 460 SUPERFAMILY SSF52374 1 311 2.68E-95 T 13-10-2018 P40_04235 34f853ca6c6cbb8dfa198791c2f202b2 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 4.1E-157 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 P40_04235 34f853ca6c6cbb8dfa198791c2f202b2 460 Pfam PF09190 DALR domain 346 400 8.5E-9 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 P40_04235 34f853ca6c6cbb8dfa198791c2f202b2 460 SMART SM00840 342 400 2.8E-9 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 P40_04235 34f853ca6c6cbb8dfa198791c2f202b2 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 311 5.0E-124 T 13-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 P40_04235 34f853ca6c6cbb8dfa198791c2f202b2 460 Gene3D G3DSA:3.40.50.620 1 304 1.6E-128 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_18090 033ea604097d3307eeca450dc968e906 941 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 938 22.791 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 P40_18090 033ea604097d3307eeca450dc968e906 941 Pfam PF00005 ABC transporter 621 858 2.3E-9 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_18090 033ea604097d3307eeca450dc968e906 941 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_18090 033ea604097d3307eeca450dc968e906 941 Gene3D G3DSA:1.10.8.280 286 402 9.8E-249 T 13-10-2018 P40_18090 033ea604097d3307eeca450dc968e906 941 Gene3D G3DSA:1.20.1580.10 690 828 2.2E-139 T 13-10-2018 P40_18090 033ea604097d3307eeca450dc968e906 941 Gene3D G3DSA:3.30.190.20 130 243 9.8E-249 T 13-10-2018 P40_18090 033ea604097d3307eeca450dc968e906 941 Gene3D G3DSA:1.20.1580.10 90 491 9.8E-249 T 13-10-2018 P40_18090 033ea604097d3307eeca450dc968e906 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 922 0.0 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 P40_18090 033ea604097d3307eeca450dc968e906 941 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_18090 033ea604097d3307eeca450dc968e906 941 SUPERFAMILY SSF52540 614 908 2.15E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18090 033ea604097d3307eeca450dc968e906 941 Gene3D G3DSA:3.40.50.300 614 934 2.2E-139 T 13-10-2018 P40_18090 033ea604097d3307eeca450dc968e906 941 SUPERFAMILY SSF52540 7 568 1.81E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18090 033ea604097d3307eeca450dc968e906 941 Gene3D G3DSA:3.40.50.300 6 594 9.8E-249 T 13-10-2018 P40_09050 50b3496c7ed826122f1b8955ad6d399c 101 Gene3D G3DSA:1.10.260.40 1 70 1.1E-13 T 13-10-2018 P40_09050 50b3496c7ed826122f1b8955ad6d399c 101 SMART SM00530 7 61 2.0E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_09050 50b3496c7ed826122f1b8955ad6d399c 101 SUPERFAMILY SSF47413 4 63 1.13E-10 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_09050 50b3496c7ed826122f1b8955ad6d399c 101 Pfam PF01381 Helix-turn-helix 8 59 1.3E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_18575 bcf8b094304f4224db44e47a88a87101 343 Gene3D G3DSA:2.40.50.100 46 78 2.6E-11 T 13-10-2018 P40_18575 bcf8b094304f4224db44e47a88a87101 343 SUPERFAMILY SSF111369 44 122 8.5E-8 T 13-10-2018 P40_18575 bcf8b094304f4224db44e47a88a87101 343 Pfam PF13533 Biotin-lipoyl like 50 91 2.6E-11 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain P40_18575 bcf8b094304f4224db44e47a88a87101 343 Gene3D G3DSA:2.40.30.170 220 339 5.0E-36 T 13-10-2018 P40_18575 bcf8b094304f4224db44e47a88a87101 343 SUPERFAMILY SSF111369 138 257 5.1E-10 T 13-10-2018 P40_18575 bcf8b094304f4224db44e47a88a87101 343 Gene3D G3DSA:1.10.287.470 79 172 2.6E-11 T 13-10-2018 P40_18575 bcf8b094304f4224db44e47a88a87101 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 190 280 3.7E-13 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain P40_11065 841d49ecda19c3d4e0b1f9203cb64c9c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.4E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11065 841d49ecda19c3d4e0b1f9203cb64c9c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.4E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11065 841d49ecda19c3d4e0b1f9203cb64c9c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.4E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11065 841d49ecda19c3d4e0b1f9203cb64c9c 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 1.9E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11065 841d49ecda19c3d4e0b1f9203cb64c9c 307 Pfam PF03466 LysR substrate binding domain 93 302 7.7E-26 T 13-10-2018 IPR005119 LysR, substrate-binding P40_11065 841d49ecda19c3d4e0b1f9203cb64c9c 307 Gene3D G3DSA:3.40.190.10 166 267 1.3E-39 T 13-10-2018 P40_11065 841d49ecda19c3d4e0b1f9203cb64c9c 307 SUPERFAMILY SSF53850 94 303 6.52E-28 T 13-10-2018 P40_11065 841d49ecda19c3d4e0b1f9203cb64c9c 307 SUPERFAMILY SSF46785 7 90 3.43E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_11065 841d49ecda19c3d4e0b1f9203cb64c9c 307 Gene3D G3DSA:1.10.10.10 10 97 8.3E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_11065 841d49ecda19c3d4e0b1f9203cb64c9c 307 Gene3D G3DSA:3.40.190.10 110 298 1.3E-39 T 13-10-2018 P40_00200 2ef509dfdebd9f80c5f75162bfadb956 480 Gene3D G3DSA:3.40.309.10 228 430 2.6E-158 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_00200 2ef509dfdebd9f80c5f75162bfadb956 480 SUPERFAMILY SSF53720 13 476 2.62E-122 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_00200 2ef509dfdebd9f80c5f75162bfadb956 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 224 231 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 P40_00200 2ef509dfdebd9f80c5f75162bfadb956 480 Pfam PF00171 Aldehyde dehydrogenase family 13 449 1.8E-94 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_00200 2ef509dfdebd9f80c5f75162bfadb956 480 PIRSF PIRSF036492 4 478 2.5E-162 T 13-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 P40_00200 2ef509dfdebd9f80c5f75162bfadb956 480 Gene3D G3DSA:3.40.605.10 26 450 2.6E-158 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_18140 063c4dff9310f5b77fcf7ff7d49695b9 132 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 13 129 6.0E-55 T 13-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18140 063c4dff9310f5b77fcf7ff7d49695b9 132 Gene3D G3DSA:3.30.420.80 4 132 1.1E-54 T 13-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 P40_18140 063c4dff9310f5b77fcf7ff7d49695b9 132 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 132 32.6 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 P40_18140 063c4dff9310f5b77fcf7ff7d49695b9 132 Pfam PF00411 Ribosomal protein S11 22 131 8.2E-52 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 P40_18140 063c4dff9310f5b77fcf7ff7d49695b9 132 PIRSF PIRSF002131 1 132 2.9E-52 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 P40_18140 063c4dff9310f5b77fcf7ff7d49695b9 132 SUPERFAMILY SSF53137 20 132 8.5E-47 T 13-10-2018 P40_18140 063c4dff9310f5b77fcf7ff7d49695b9 132 ProSitePatterns PS00054 Ribosomal protein S11 signature. 100 122 - T 13-10-2018 IPR018102 Ribosomal S11, conserved site P40_03245 65012de8f90ec4129ab512d64d302cd2 335 SUPERFAMILY SSF102114 99 322 3.01E-24 T 13-10-2018 P40_03245 65012de8f90ec4129ab512d64d302cd2 335 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 14 333 1.4E-138 T 13-10-2018 IPR022462 Lysine-2,3-aminomutase-like P40_03245 65012de8f90ec4129ab512d64d302cd2 335 Gene3D G3DSA:3.20.20.70 49 332 3.0E-89 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_03245 65012de8f90ec4129ab512d64d302cd2 335 PIRSF PIRSF004911 2 335 1.6E-112 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase P40_03245 65012de8f90ec4129ab512d64d302cd2 335 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 326 1.6E-101 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase P40_03245 65012de8f90ec4129ab512d64d302cd2 335 Pfam PF04055 Radical SAM superfamily 114 227 4.8E-8 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P40_03245 65012de8f90ec4129ab512d64d302cd2 335 Pfam PF13394 4Fe-4S single cluster domain 114 195 1.0E-5 T 13-10-2018 P40_09645 71d3b2c2dda4c5defbde269d83786989 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 116 2.4E-22 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_09645 71d3b2c2dda4c5defbde269d83786989 387 Gene3D G3DSA:1.20.140.10 236 386 2.0E-36 T 13-10-2018 P40_09645 71d3b2c2dda4c5defbde269d83786989 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 219 1.6E-20 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_09645 71d3b2c2dda4c5defbde269d83786989 387 Gene3D G3DSA:1.10.540.10 3 117 7.8E-26 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_09645 71d3b2c2dda4c5defbde269d83786989 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_09645 71d3b2c2dda4c5defbde269d83786989 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 365 6.4E-34 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_09645 71d3b2c2dda4c5defbde269d83786989 387 SUPERFAMILY SSF56645 7 244 1.03E-58 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_09645 71d3b2c2dda4c5defbde269d83786989 387 SUPERFAMILY SSF47203 230 385 1.35E-43 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_09645 71d3b2c2dda4c5defbde269d83786989 387 Gene3D G3DSA:2.40.110.10 121 235 3.2E-33 T 13-10-2018 P40_09645 71d3b2c2dda4c5defbde269d83786989 387 PIRSF PIRSF016578 236 384 7.6E-6 T 13-10-2018 P40_09645 71d3b2c2dda4c5defbde269d83786989 387 PIRSF PIRSF016578 26 97 0.0011 T 13-10-2018 P40_09645 71d3b2c2dda4c5defbde269d83786989 387 PIRSF PIRSF016578 130 196 0.13 T 13-10-2018 P40_09190 22bca27c5f5db94f6618b82571934b8c 437 SMART SM00228 208 272 0.27 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_09190 22bca27c5f5db94f6618b82571934b8c 437 SMART SM00228 113 185 0.22 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_09190 22bca27c5f5db94f6618b82571934b8c 437 Pfam PF02163 Peptidase family M50 6 422 6.0E-72 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 P40_09190 22bca27c5f5db94f6618b82571934b8c 437 Gene3D G3DSA:2.30.42.10 125 214 1.8E-19 T 13-10-2018 P40_09190 22bca27c5f5db94f6618b82571934b8c 437 SUPERFAMILY SSF50156 210 285 8.28E-12 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 P40_09190 22bca27c5f5db94f6618b82571934b8c 437 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 434 7.9E-93 T 13-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 P40_09190 22bca27c5f5db94f6618b82571934b8c 437 SUPERFAMILY SSF50156 86 181 3.29E-13 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 P40_09190 22bca27c5f5db94f6618b82571934b8c 437 Gene3D G3DSA:2.30.42.10 215 299 1.2E-16 T 13-10-2018 P40_08840 b51172d177a550660c9990c3e5b55c82 897 Gene3D G3DSA:2.120.10.10 584 822 8.0E-6 T 13-10-2018 P40_08840 b51172d177a550660c9990c3e5b55c82 897 Gene3D G3DSA:3.20.20.140 76 314 2.8E-36 T 13-10-2018 P40_08840 b51172d177a550660c9990c3e5b55c82 897 SUPERFAMILY SSF50939 510 807 9.67E-11 T 13-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 P40_08840 b51172d177a550660c9990c3e5b55c82 897 SUPERFAMILY SSF89550 85 308 3.73E-20 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 P40_06820 ea4a04baafce146fc1bb01395d2c4908 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.1E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_06820 ea4a04baafce146fc1bb01395d2c4908 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.1E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_06820 ea4a04baafce146fc1bb01395d2c4908 206 SUPERFAMILY SSF48498 87 194 3.93E-20 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_06820 ea4a04baafce146fc1bb01395d2c4908 206 SUPERFAMILY SSF46689 6 75 5.49E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06820 ea4a04baafce146fc1bb01395d2c4908 206 Gene3D G3DSA:1.10.357.10 2 199 5.5E-53 T 13-10-2018 P40_06820 ea4a04baafce146fc1bb01395d2c4908 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 3.7E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_06820 ea4a04baafce146fc1bb01395d2c4908 206 Pfam PF13305 WHG domain 88 175 1.0E-13 T 13-10-2018 IPR025996 WHG domain P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 229 3.6E-33 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 Gene3D G3DSA:1.10.1740.10 2 82 2.4E-28 T 13-10-2018 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 PRINTS PR00046 Major sigma-70 factor signature 64 72 1.2E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 PRINTS PR00046 Major sigma-70 factor signature 40 53 1.2E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 PRINTS PR00046 Major sigma-70 factor signature 200 215 1.2E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 PRINTS PR00046 Major sigma-70 factor signature 215 226 1.2E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 PRINTS PR00046 Major sigma-70 factor signature 183 195 1.2E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 SUPERFAMILY SSF88659 158 230 3.55E-18 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 2 231 57.632 T 13-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 40 53 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 Pfam PF04545 Sigma-70, region 4 179 227 1.9E-15 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 200 226 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 Gene3D G3DSA:1.20.140.160 84 231 3.6E-45 T 13-10-2018 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 SUPERFAMILY SSF88946 3 85 3.77E-23 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 SUPERFAMILY SSF88659 86 151 6.1E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 Pfam PF04539 Sigma-70 region 3 94 143 2.4E-12 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 PIRSF PIRSF000770 2 231 6.9E-38 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 13 230 4.1E-80 T 13-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 P40_15885 13ffd2ab245ef395b8f9cf9c30adf477 231 Pfam PF04542 Sigma-70 region 2 13 85 3.5E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_21190 e416a7b5d821ec89816fa4cd399e814c 290 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 7 290 29.985 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 P40_21190 e416a7b5d821ec89816fa4cd399e814c 290 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 69 91 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site P40_21190 e416a7b5d821ec89816fa4cd399e814c 290 Pfam PF01040 UbiA prenyltransferase family 30 273 4.7E-61 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 P40_21190 e416a7b5d821ec89816fa4cd399e814c 290 Gene3D G3DSA:1.20.120.1780 172 290 3.2E-11 T 13-10-2018 P40_21190 e416a7b5d821ec89816fa4cd399e814c 290 Gene3D G3DSA:1.10.357.140 25 171 5.9E-41 T 13-10-2018 P40_21190 e416a7b5d821ec89816fa4cd399e814c 290 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 12 290 1.1E-103 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 P40_00205 e5119c7e574621881d5fe7cc883adf29 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 6.2E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_00205 e5119c7e574621881d5fe7cc883adf29 234 Pfam PF13972 Bacterial transcriptional repressor 57 203 7.6E-42 T 13-10-2018 IPR025722 Bacterial transcriptional repressor TetR P40_00205 e5119c7e574621881d5fe7cc883adf29 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.6E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_00205 e5119c7e574621881d5fe7cc883adf29 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.6E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_00205 e5119c7e574621881d5fe7cc883adf29 234 Gene3D G3DSA:1.10.357.10 2 219 1.9E-65 T 13-10-2018 P40_00205 e5119c7e574621881d5fe7cc883adf29 234 SUPERFAMILY SSF46689 4 66 2.28E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_16365 14585d4438ce92de477cc056c4b358c2 570 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 387 401 - T 13-10-2018 IPR001482 Type II/IV secretion system protein P40_16365 14585d4438ce92de477cc056c4b358c2 570 Gene3D G3DSA:3.30.300.160 66 144 3.6E-6 T 13-10-2018 P40_16365 14585d4438ce92de477cc056c4b358c2 570 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 10 568 5.3E-256 T 13-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 P40_16365 14585d4438ce92de477cc056c4b358c2 570 Gene3D G3DSA:3.30.450.90 157 292 1.4E-47 T 13-10-2018 P40_16365 14585d4438ce92de477cc056c4b358c2 570 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 44 149 3.2E-20 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal P40_16365 14585d4438ce92de477cc056c4b358c2 570 Pfam PF00437 Type II/IV secretion system protein 192 459 2.0E-89 T 13-10-2018 IPR001482 Type II/IV secretion system protein P40_16365 14585d4438ce92de477cc056c4b358c2 570 SUPERFAMILY SSF160246 7 144 1.22E-37 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily P40_16365 14585d4438ce92de477cc056c4b358c2 570 SUPERFAMILY SSF52540 180 567 6.79E-96 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_16365 14585d4438ce92de477cc056c4b358c2 570 Gene3D G3DSA:3.40.50.300 294 570 2.9E-105 T 13-10-2018 P40_02290 7e44cebc3f4c2e3472ad1ed418ba70b6 165 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 152 5.2E-45 T 13-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 P40_02290 7e44cebc3f4c2e3472ad1ed418ba70b6 165 Gene3D G3DSA:1.20.120.1370 1 158 5.1E-39 T 13-10-2018 IPR038309 Rsd/AlgQ superfamily P40_20380 dbc6f7094473af4395f0cf25e272fc9c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.2E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20380 dbc6f7094473af4395f0cf25e272fc9c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.2E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20380 dbc6f7094473af4395f0cf25e272fc9c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 7.2E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20380 dbc6f7094473af4395f0cf25e272fc9c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.2E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20380 dbc6f7094473af4395f0cf25e272fc9c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 7.2E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20380 dbc6f7094473af4395f0cf25e272fc9c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 7.2E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20380 dbc6f7094473af4395f0cf25e272fc9c 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 173 0.0011 T 13-10-2018 P40_20380 dbc6f7094473af4395f0cf25e272fc9c 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 3.6E-57 T 13-10-2018 P40_20380 dbc6f7094473af4395f0cf25e272fc9c 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_20380 dbc6f7094473af4395f0cf25e272fc9c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20380 dbc6f7094473af4395f0cf25e272fc9c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20380 dbc6f7094473af4395f0cf25e272fc9c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20380 dbc6f7094473af4395f0cf25e272fc9c 248 Gene3D G3DSA:3.40.50.720 1 246 5.8E-78 T 13-10-2018 P40_20380 dbc6f7094473af4395f0cf25e272fc9c 248 SUPERFAMILY SSF51735 1 245 6.41E-76 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_15300 03af90f39e5e818a45e5494bfcd14791 393 PIRSF PIRSF000521 12 148 6.8E-13 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_15300 03af90f39e5e818a45e5494bfcd14791 393 PIRSF PIRSF000521 160 386 6.9E-35 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_15300 03af90f39e5e818a45e5494bfcd14791 393 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 5 386 71.668 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 P40_15300 03af90f39e5e818a45e5494bfcd14791 393 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 211 248 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_15300 03af90f39e5e818a45e5494bfcd14791 393 Pfam PF00202 Aminotransferase class-III 14 383 3.4E-116 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_15300 03af90f39e5e818a45e5494bfcd14791 393 Gene3D G3DSA:3.90.1150.10 14 376 4.4E-147 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_15300 03af90f39e5e818a45e5494bfcd14791 393 SUPERFAMILY SSF53383 7 383 1.93E-128 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_15300 03af90f39e5e818a45e5494bfcd14791 393 Gene3D G3DSA:3.40.640.10 49 292 4.4E-147 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_15300 03af90f39e5e818a45e5494bfcd14791 393 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 6 383 1.4E-145 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 P40_15690 ef843d5d55411c63eed0404d554ff722 465 SUPERFAMILY SSF102405 131 337 2.29E-39 T 13-10-2018 P40_15690 ef843d5d55411c63eed0404d554ff722 465 Pfam PF03641 Possible lysine decarboxylase 201 337 2.9E-31 T 13-10-2018 IPR031100 LOG family P40_15690 ef843d5d55411c63eed0404d554ff722 465 Pfam PF11892 Domain of unknown function (DUF3412) 345 463 7.0E-53 T 13-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 P40_15690 ef843d5d55411c63eed0404d554ff722 465 Gene3D G3DSA:3.40.50.450 135 463 8.4E-112 T 13-10-2018 P40_15690 ef843d5d55411c63eed0404d554ff722 465 Gene3D G3DSA:3.30.1850.10 13 134 2.7E-46 T 13-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 P40_15690 ef843d5d55411c63eed0404d554ff722 465 Pfam PF14793 Domain of unknown function (DUF4478) 19 125 4.7E-46 T 13-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 P40_07815 725c744d0bc4676081b369da85fcffa2 235 Gene3D G3DSA:3.40.50.300 1 235 1.8E-64 T 13-10-2018 P40_07815 725c744d0bc4676081b369da85fcffa2 235 SUPERFAMILY SSF52540 2 232 2.08E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07815 725c744d0bc4676081b369da85fcffa2 235 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_07815 725c744d0bc4676081b369da85fcffa2 235 Pfam PF00005 ABC transporter 17 163 7.8E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_07815 725c744d0bc4676081b369da85fcffa2 235 SMART SM00382 26 214 1.2E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_00800 d638d438508c975bf4b4dc072e34fee8 146 Gene3D G3DSA:3.10.450.50 1 146 7.1E-49 T 13-10-2018 P40_00800 d638d438508c975bf4b4dc072e34fee8 146 SUPERFAMILY SSF54427 23 119 8.91E-32 T 13-10-2018 IPR032710 NTF2-like domain superfamily P40_00800 d638d438508c975bf4b4dc072e34fee8 146 Pfam PF02810 SEC-C motif 129 146 6.0E-9 T 13-10-2018 IPR004027 SEC-C motif P40_00800 d638d438508c975bf4b4dc072e34fee8 146 Pfam PF02810 SEC-C motif 4 18 7.7E-6 T 13-10-2018 IPR004027 SEC-C motif P40_00800 d638d438508c975bf4b4dc072e34fee8 146 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 119 26.047 T 13-10-2018 IPR023006 Uncharacterised protein family UPF0225 P40_00800 d638d438508c975bf4b4dc072e34fee8 146 SUPERFAMILY SSF103642 126 146 2.29E-7 T 13-10-2018 P40_15655 394f2ef9f455995f56668141a0eedf55 136 SUPERFAMILY SSF50891 4 97 1.59E-5 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily P40_15655 394f2ef9f455995f56668141a0eedf55 136 Gene3D G3DSA:2.40.100.20 3 136 4.0E-37 T 13-10-2018 P40_15655 394f2ef9f455995f56668141a0eedf55 136 Pfam PF12903 Protein of unknown function (DUF3830) 6 133 9.8E-29 T 13-10-2018 IPR024532 Protein of unknown function DUF3830 P40_01545 346b9dd531bcce384d9173b0ee62bd37 732 SUPERFAMILY SSF82784 1 128 1.96E-21 T 13-10-2018 IPR036102 OsmC/Ohr superfamily P40_01545 346b9dd531bcce384d9173b0ee62bd37 732 Pfam PF02566 OsmC-like protein 32 127 4.0E-11 T 13-10-2018 IPR003718 OsmC/Ohr family P40_01545 346b9dd531bcce384d9173b0ee62bd37 732 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 727 0.0 T 13-10-2018 IPR019938 YcaO domain protein P40_01545 346b9dd531bcce384d9173b0ee62bd37 732 Gene3D G3DSA:3.30.300.20 3 131 3.7E-16 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta P40_01545 346b9dd531bcce384d9173b0ee62bd37 732 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 540 3.3E-71 T 13-10-2018 IPR003776 YcaO-like domain P40_01545 346b9dd531bcce384d9173b0ee62bd37 732 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 551 2.2E-96 T 13-10-2018 IPR003776 YcaO-like domain P40_04665 8271c3979f6bbe4e7388423d584f2dc3 257 Pfam PF00398 Ribosomal RNA adenine dimethylase 4 254 1.2E-61 T 13-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm P40_04665 8271c3979f6bbe4e7388423d584f2dc3 257 Gene3D G3DSA:3.40.50.150 1 192 5.4E-66 T 13-10-2018 P40_04665 8271c3979f6bbe4e7388423d584f2dc3 257 SUPERFAMILY SSF53335 4 255 5.93E-76 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_04665 8271c3979f6bbe4e7388423d584f2dc3 257 Gene3D G3DSA:1.10.8.100 195 257 4.2E-20 T 13-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 P40_04665 8271c3979f6bbe4e7388423d584f2dc3 257 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 4 257 55.983 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 P40_04665 8271c3979f6bbe4e7388423d584f2dc3 257 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 36 63 - T 13-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 P40_04665 8271c3979f6bbe4e7388423d584f2dc3 257 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 4 255 1.2E-83 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 P40_04665 8271c3979f6bbe4e7388423d584f2dc3 257 SMART SM00650 20 190 1.9E-81 T 13-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 P40_04880 3de9b911ed9b0b29659773a35a3456b0 249 Gene3D G3DSA:3.40.50.150 20 248 3.8E-58 T 13-10-2018 P40_04880 3de9b911ed9b0b29659773a35a3456b0 249 SUPERFAMILY SSF53335 24 243 1.15E-37 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_04880 3de9b911ed9b0b29659773a35a3456b0 249 PIRSF PIRSF006325 3 245 5.8E-76 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 P40_04880 3de9b911ed9b0b29659773a35a3456b0 249 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 6 242 7.3E-71 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 P40_04880 3de9b911ed9b0b29659773a35a3456b0 249 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 5 244 35.851 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 P40_04880 3de9b911ed9b0b29659773a35a3456b0 249 Pfam PF13649 Methyltransferase domain 62 160 7.4E-13 T 13-10-2018 P40_15010 27e93e433d3d4bf4edf108379da82e2e 257 SMART SM00849 11 188 1.5E-6 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_15010 27e93e433d3d4bf4edf108379da82e2e 257 Pfam PF12706 Beta-lactamase superfamily domain 24 209 4.0E-25 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_15010 27e93e433d3d4bf4edf108379da82e2e 257 SUPERFAMILY SSF56281 3 233 2.49E-44 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_15010 27e93e433d3d4bf4edf108379da82e2e 257 Gene3D G3DSA:3.60.15.10 6 251 2.8E-44 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_04555 717b0d1218d078e2162ed0a6ecfd1840 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 262 1.8E-39 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_04555 717b0d1218d078e2162ed0a6ecfd1840 264 SUPERFAMILY SSF52096 2 262 5.6E-64 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_04555 717b0d1218d078e2162ed0a6ecfd1840 264 Gene3D G3DSA:1.10.12.10 207 262 2.4E-13 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_04555 717b0d1218d078e2162ed0a6ecfd1840 264 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 P40_04555 717b0d1218d078e2162ed0a6ecfd1840 264 Gene3D G3DSA:3.90.226.10 1 204 5.0E-51 T 13-10-2018 P40_02260 e4d7e0034310ab242ac0c888d9f2a525 423 Pfam PF00202 Aminotransferase class-III 27 418 3.1E-128 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_02260 e4d7e0034310ab242ac0c888d9f2a525 423 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 423 48.985 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 P40_02260 e4d7e0034310ab242ac0c888d9f2a525 423 Gene3D G3DSA:3.90.1150.10 11 416 1.2E-165 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_02260 e4d7e0034310ab242ac0c888d9f2a525 423 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 420 5.2E-179 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 P40_02260 e4d7e0034310ab242ac0c888d9f2a525 423 Gene3D G3DSA:3.40.640.10 61 331 1.2E-165 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_02260 e4d7e0034310ab242ac0c888d9f2a525 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 243 280 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_02260 e4d7e0034310ab242ac0c888d9f2a525 423 SUPERFAMILY SSF53383 7 419 1.81E-130 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_03875 02285e31422e72b96b61907ef8005b7f 93 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 4 93 1.2E-42 T 13-10-2018 IPR009359 Phenylacetic acid degradation B P40_03875 02285e31422e72b96b61907ef8005b7f 93 PIRSF PIRSF030200 1 93 1.8E-42 T 13-10-2018 IPR009359 Phenylacetic acid degradation B P40_03875 02285e31422e72b96b61907ef8005b7f 93 Gene3D G3DSA:3.10.20.520 1 63 9.3E-31 T 13-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B P40_03875 02285e31422e72b96b61907ef8005b7f 93 Pfam PF06243 Phenylacetic acid degradation B 3 89 1.2E-39 T 13-10-2018 IPR009359 Phenylacetic acid degradation B P40_19860 40c8ad5d360f0997a1e2b52923f12fd9 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 99 379 8.5E-30 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 P40_19860 40c8ad5d360f0997a1e2b52923f12fd9 389 Gene3D G3DSA:2.40.50.100 97 231 6.8E-50 T 13-10-2018 P40_19860 40c8ad5d360f0997a1e2b52923f12fd9 389 SUPERFAMILY SSF111369 95 306 6.54E-17 T 13-10-2018 P40_19860 40c8ad5d360f0997a1e2b52923f12fd9 389 Gene3D G3DSA:2.40.420.20 78 368 6.8E-50 T 13-10-2018 P40_19860 40c8ad5d360f0997a1e2b52923f12fd9 389 Gene3D G3DSA:1.10.287.470 131 194 6.8E-50 T 13-10-2018 P40_19860 40c8ad5d360f0997a1e2b52923f12fd9 389 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 81 302 7.7E-30 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain P40_19860 40c8ad5d360f0997a1e2b52923f12fd9 389 Gene3D G3DSA:2.40.30.170 83 309 6.8E-50 T 13-10-2018 P40_14875 4d8d65d070ee1d52d1ed707c4b083473 170 TIGRFAM TIGR00077 lspA: signal peptidase II 10 162 2.7E-40 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_14875 4d8d65d070ee1d52d1ed707c4b083473 170 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 161 16.103 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_14875 4d8d65d070ee1d52d1ed707c4b083473 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 1.7E-17 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_14875 4d8d65d070ee1d52d1ed707c4b083473 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 136 152 1.7E-17 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_14875 4d8d65d070ee1d52d1ed707c4b083473 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 100 115 1.7E-17 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_14875 4d8d65d070ee1d52d1ed707c4b083473 170 Pfam PF01252 Signal peptidase (SPase) II 18 154 1.3E-36 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_14875 4d8d65d070ee1d52d1ed707c4b083473 170 ProSitePatterns PS00855 Signal peptidases II signature. 103 115 - T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_07205 4d8d65d070ee1d52d1ed707c4b083473 170 TIGRFAM TIGR00077 lspA: signal peptidase II 10 162 2.7E-40 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_07205 4d8d65d070ee1d52d1ed707c4b083473 170 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 161 16.103 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_07205 4d8d65d070ee1d52d1ed707c4b083473 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 1.7E-17 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_07205 4d8d65d070ee1d52d1ed707c4b083473 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 136 152 1.7E-17 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_07205 4d8d65d070ee1d52d1ed707c4b083473 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 100 115 1.7E-17 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_07205 4d8d65d070ee1d52d1ed707c4b083473 170 Pfam PF01252 Signal peptidase (SPase) II 18 154 1.3E-36 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_07205 4d8d65d070ee1d52d1ed707c4b083473 170 ProSitePatterns PS00855 Signal peptidases II signature. 103 115 - T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_11510 30e0097e6e712b62a545eabe9c63a7f2 243 Pfam PF00149 Calcineurin-like phosphoesterase 4 200 4.9E-10 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 P40_11510 30e0097e6e712b62a545eabe9c63a7f2 243 Gene3D G3DSA:3.60.21.10 4 225 3.6E-16 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like P40_11510 30e0097e6e712b62a545eabe9c63a7f2 243 SUPERFAMILY SSF56300 4 222 2.15E-28 T 13-10-2018 P40_11510 30e0097e6e712b62a545eabe9c63a7f2 243 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 233 4.1E-86 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 P40_11510 30e0097e6e712b62a545eabe9c63a7f2 243 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 242 114.925 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 SUPERFAMILY SSF52009 347 465 1.57E-34 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 1.9E-5 T 13-10-2018 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 1.9E-5 T 13-10-2018 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 1.9E-5 T 13-10-2018 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 780 5.5E-61 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 3.1E-26 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 Gene3D G3DSA:3.30.470.20 193 356 1.3E-58 T 13-10-2018 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 786 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 Gene3D G3DSA:3.30.1490.20 2 192 4.9E-74 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 SUPERFAMILY SSF51621 461 786 2.25E-97 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 Gene3D G3DSA:3.20.20.60 477 789 1.7E-102 T 13-10-2018 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 SUPERFAMILY SSF56059 3 384 2.59E-109 T 13-10-2018 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 Gene3D G3DSA:3.50.30.10 371 476 2.2E-41 T 13-10-2018 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 PIRSF PIRSF000854 1 790 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 341 1.4E-119 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 P40_11300 48e7392a5ec783c4d5621fd714c096ae 790 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 P40_12750 aadc1058a69ad55e35f448c18fd73acd 507 Pfam PF00156 Phosphoribosyl transferase domain 278 393 2.8E-8 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 P40_12750 aadc1058a69ad55e35f448c18fd73acd 507 Gene3D G3DSA:3.40.50.2020 277 441 3.6E-153 T 13-10-2018 P40_12750 aadc1058a69ad55e35f448c18fd73acd 507 SUPERFAMILY SSF56235 2 257 8.32E-72 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P40_12750 aadc1058a69ad55e35f448c18fd73acd 507 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 464 44.727 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 P40_12750 aadc1058a69ad55e35f448c18fd73acd 507 SUPERFAMILY SSF53271 250 483 7.87E-72 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like P40_12750 aadc1058a69ad55e35f448c18fd73acd 507 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 3.3E-161 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 P40_12750 aadc1058a69ad55e35f448c18fd73acd 507 Gene3D G3DSA:3.60.20.10 2 412 3.6E-153 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P40_12750 aadc1058a69ad55e35f448c18fd73acd 507 PIRSF PIRSF000485 1 481 1.3E-161 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 P40_12750 aadc1058a69ad55e35f448c18fd73acd 507 Pfam PF13522 Glutamine amidotransferase domain 65 208 2.4E-15 T 13-10-2018 P40_13895 c59bfdd2a0ce7f908cae621773d2e9d6 114 Gene3D G3DSA:2.40.10.220 2 103 4.7E-7 T 13-10-2018 P40_13895 c59bfdd2a0ce7f908cae621773d2e9d6 114 Pfam PF07238 PilZ domain 6 99 1.1E-8 T 13-10-2018 IPR009875 PilZ domain GO:0035438 P40_13895 c59bfdd2a0ce7f908cae621773d2e9d6 114 SUPERFAMILY SSF141371 3 85 2.75E-8 T 13-10-2018 P40_01395 31644e6a72ebc00cb1caa4d05670e59b 365 SUPERFAMILY SSF101790 268 358 2.78E-27 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal P40_01395 31644e6a72ebc00cb1caa4d05670e59b 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 259 350 2.5E-21 T 13-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 P40_01395 31644e6a72ebc00cb1caa4d05670e59b 365 Gene3D G3DSA:2.40.30.110 274 364 2.2E-34 T 13-10-2018 P40_01395 31644e6a72ebc00cb1caa4d05670e59b 365 Gene3D G3DSA:4.10.1250.10 230 273 1.0E-21 T 13-10-2018 P40_01395 31644e6a72ebc00cb1caa4d05670e59b 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 252 1.7E-84 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain P40_01395 31644e6a72ebc00cb1caa4d05670e59b 365 Gene3D G3DSA:3.30.70.1400 51 136 1.1E-81 T 13-10-2018 P40_01395 31644e6a72ebc00cb1caa4d05670e59b 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 356 6.1E-130 T 13-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 P40_01395 31644e6a72ebc00cb1caa4d05670e59b 365 PIRSF PIRSF006487 1 364 7.6E-86 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 P40_01395 31644e6a72ebc00cb1caa4d05670e59b 365 Gene3D G3DSA:3.30.1360.120 6 229 1.1E-81 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 P40_01395 31644e6a72ebc00cb1caa4d05670e59b 365 SUPERFAMILY SSF103025 4 274 3.27E-93 T 13-10-2018 P40_01395 31644e6a72ebc00cb1caa4d05670e59b 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 356 44.601 T 13-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 P40_01745 114e03bcfa253e023e9ec154fa92577b 231 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 81 1.4E-16 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_01745 114e03bcfa253e023e9ec154fa92577b 231 Pfam PF00043 Glutathione S-transferase, C-terminal domain 129 195 1.6E-6 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal P40_01745 114e03bcfa253e023e9ec154fa92577b 231 SUPERFAMILY SSF47616 78 205 1.53E-33 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_01745 114e03bcfa253e023e9ec154fa92577b 231 Gene3D G3DSA:3.40.30.10 1 84 9.6E-32 T 13-10-2018 P40_01745 114e03bcfa253e023e9ec154fa92577b 231 SUPERFAMILY SSF52833 2 84 2.11E-23 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_01745 114e03bcfa253e023e9ec154fa92577b 231 Gene3D G3DSA:1.20.1050.10 86 228 7.6E-47 T 13-10-2018 P40_21560 914cceba27f3b2634640c66c6dd09b46 156 Gene3D G3DSA:1.20.5.620 62 122 2.8E-20 T 13-10-2018 P40_21560 914cceba27f3b2634640c66c6dd09b46 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.505 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 P40_21560 914cceba27f3b2634640c66c6dd09b46 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 1.3E-35 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 P40_21560 914cceba27f3b2634640c66c6dd09b46 156 SUPERFAMILY SSF81573 64 121 1.7E-15 T 13-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily P40_21560 914cceba27f3b2634640c66c6dd09b46 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.4E-49 T 13-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 P40_16530 4d69442653c76d22d6634eb122b6a1d3 261 SUPERFAMILY SSF51735 13 258 5.37E-74 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_16530 4d69442653c76d22d6634eb122b6a1d3 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.3E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_16530 4d69442653c76d22d6634eb122b6a1d3 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 1.3E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_16530 4d69442653c76d22d6634eb122b6a1d3 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.3E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_16530 4d69442653c76d22d6634eb122b6a1d3 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_16530 4d69442653c76d22d6634eb122b6a1d3 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 256 1.1E-62 T 13-10-2018 P40_16530 4d69442653c76d22d6634eb122b6a1d3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 2.5E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_16530 4d69442653c76d22d6634eb122b6a1d3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 2.5E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_16530 4d69442653c76d22d6634eb122b6a1d3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.5E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_16530 4d69442653c76d22d6634eb122b6a1d3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 2.5E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_16530 4d69442653c76d22d6634eb122b6a1d3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.5E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_16530 4d69442653c76d22d6634eb122b6a1d3 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 2.5E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_16530 4d69442653c76d22d6634eb122b6a1d3 261 Gene3D G3DSA:3.40.50.720 4 260 2.0E-76 T 13-10-2018 P40_09350 b0ad38ff306680b858e93bc86696ed7e 400 SUPERFAMILY SSF103473 7 390 3.4E-58 T 13-10-2018 IPR036259 MFS transporter superfamily P40_09350 b0ad38ff306680b858e93bc86696ed7e 400 Gene3D G3DSA:1.20.1250.20 11 189 2.8E-25 T 13-10-2018 P40_09350 b0ad38ff306680b858e93bc86696ed7e 400 Gene3D G3DSA:1.20.1250.20 204 392 2.2E-18 T 13-10-2018 P40_09350 b0ad38ff306680b858e93bc86696ed7e 400 Pfam PF07690 Major Facilitator Superfamily 17 337 1.1E-34 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_18545 e3412605ddb722dde012f2ad00e28355 261 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 3 261 39.556 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 P40_18545 e3412605ddb722dde012f2ad00e28355 261 Gene3D G3DSA:3.20.20.60 2 261 1.2E-97 T 13-10-2018 P40_18545 e3412605ddb722dde012f2ad00e28355 261 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 2 261 3.0E-94 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 P40_18545 e3412605ddb722dde012f2ad00e28355 261 SUPERFAMILY SSF51621 3 261 3.56E-94 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 P40_18545 e3412605ddb722dde012f2ad00e28355 261 PIRSF PIRSF000388 1 261 5.6E-90 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 P40_18545 e3412605ddb722dde012f2ad00e28355 261 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 256 3.9E-99 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 P40_11270 f2891acb3fae78e0a66406df6a425d5b 259 Gene3D G3DSA:3.40.50.300 2 259 1.9E-63 T 13-10-2018 P40_11270 f2891acb3fae78e0a66406df6a425d5b 259 SUPERFAMILY SSF52540 1 259 1.02E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_11270 f2891acb3fae78e0a66406df6a425d5b 259 Pfam PF13614 AAA domain 5 186 6.3E-38 T 13-10-2018 IPR025669 AAA domain P40_03165 23c000592a78b1cbfffa556847302c80 118 Pfam PF07237 Protein of unknown function (DUF1428) 2 104 2.1E-42 T 13-10-2018 IPR009874 Protein of unknown function DUF1428 P40_03165 23c000592a78b1cbfffa556847302c80 118 PIRSF PIRSF007028 1 118 3.8E-48 T 13-10-2018 IPR009874 Protein of unknown function DUF1428 P40_03165 23c000592a78b1cbfffa556847302c80 118 SUPERFAMILY SSF54909 1 117 6.97E-48 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_03165 23c000592a78b1cbfffa556847302c80 118 Gene3D G3DSA:3.30.70.100 1 117 3.7E-43 T 13-10-2018 P40_06510 93690201c29c5fc9e5aaa9d837ea3bbc 468 SMART SM00062 42 266 3.6E-24 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF P40_06510 93690201c29c5fc9e5aaa9d837ea3bbc 468 Gene3D G3DSA:3.40.190.10 127 222 6.0E-57 T 13-10-2018 P40_06510 93690201c29c5fc9e5aaa9d837ea3bbc 468 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 6 463 42.809 T 13-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 P40_06510 93690201c29c5fc9e5aaa9d837ea3bbc 468 Gene3D G3DSA:1.10.530.10 285 461 5.8E-35 T 13-10-2018 P40_06510 93690201c29c5fc9e5aaa9d837ea3bbc 468 SUPERFAMILY SSF53850 43 265 1.55E-37 T 13-10-2018 P40_06510 93690201c29c5fc9e5aaa9d837ea3bbc 468 Pfam PF01464 Transglycosylase SLT domain 292 400 8.0E-24 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 P40_06510 93690201c29c5fc9e5aaa9d837ea3bbc 468 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 309 337 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 P40_06510 93690201c29c5fc9e5aaa9d837ea3bbc 468 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 264 3.6E-29 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF P40_06510 93690201c29c5fc9e5aaa9d837ea3bbc 468 Gene3D G3DSA:3.40.190.10 36 261 6.0E-57 T 13-10-2018 P40_06510 93690201c29c5fc9e5aaa9d837ea3bbc 468 SUPERFAMILY SSF53955 286 455 2.77E-36 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily P40_08810 d5dee9867169b1c50a39505cdd9c82b7 365 SUPERFAMILY SSF55729 1 150 2.4E-31 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_08810 d5dee9867169b1c50a39505cdd9c82b7 365 Gene3D G3DSA:3.40.630.30 1 150 1.6E-34 T 13-10-2018 P40_08810 d5dee9867169b1c50a39505cdd9c82b7 365 Gene3D G3DSA:3.90.70.10 229 348 2.8E-5 T 13-10-2018 P40_08810 d5dee9867169b1c50a39505cdd9c82b7 365 Pfam PF00583 Acetyltransferase (GNAT) family 18 124 1.6E-19 T 13-10-2018 IPR000182 GNAT domain P40_08810 d5dee9867169b1c50a39505cdd9c82b7 365 Pfam PF11814 Peptidase_C39 like family 159 361 1.0E-85 T 13-10-2018 IPR021770 Protein of unknown function DUF3335 P40_03455 155a26ddf064c43dc2623822a3b792d4 276 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 35 276 4.9E-116 T 13-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD P40_03455 155a26ddf064c43dc2623822a3b792d4 276 SMART SM00382 60 253 0.0026 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_03455 155a26ddf064c43dc2623822a3b792d4 276 SUPERFAMILY SSF52540 34 274 4.07E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03455 155a26ddf064c43dc2623822a3b792d4 276 Pfam PF00005 ABC transporter 51 206 1.3E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_03455 155a26ddf064c43dc2623822a3b792d4 276 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 254 275 3.3E-9 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal P40_03455 155a26ddf064c43dc2623822a3b792d4 276 Gene3D G3DSA:3.40.50.300 31 276 4.9E-55 T 13-10-2018 P40_12640 93d9916316c4400f24f3e2f74c5ac9d2 407 Gene3D G3DSA:3.30.1540.10 231 323 1.4E-136 T 13-10-2018 P40_12640 93d9916316c4400f24f3e2f74c5ac9d2 407 SUPERFAMILY SSF89796 3 396 7.59E-135 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_12640 93d9916316c4400f24f3e2f74c5ac9d2 407 Gene3D G3DSA:3.40.50.10540 5 390 1.4E-136 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_12640 93d9916316c4400f24f3e2f74c5ac9d2 407 Pfam PF02515 CoA-transferase family III 5 371 1.6E-125 T 13-10-2018 IPR003673 CoA-transferase family III GO:0003824 P40_08380 dc4b298cc76aca8c63463b2afd7d91ea 341 Gene3D G3DSA:3.40.50.1820 29 339 9.5E-100 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_08380 dc4b298cc76aca8c63463b2afd7d91ea 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 115 1.0E-10 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_08380 dc4b298cc76aca8c63463b2afd7d91ea 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 159 172 1.0E-10 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_08380 dc4b298cc76aca8c63463b2afd7d91ea 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 145 158 1.0E-10 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_08380 dc4b298cc76aca8c63463b2afd7d91ea 341 Pfam PF00561 alpha/beta hydrolase fold 75 183 9.4E-23 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_08380 dc4b298cc76aca8c63463b2afd7d91ea 341 SUPERFAMILY SSF53474 51 339 5.27E-61 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_08380 dc4b298cc76aca8c63463b2afd7d91ea 341 PRINTS PR00412 Epoxide hydrolase signature 159 172 7.4E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_08380 dc4b298cc76aca8c63463b2afd7d91ea 341 PRINTS PR00412 Epoxide hydrolase signature 100 115 7.4E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_08380 dc4b298cc76aca8c63463b2afd7d91ea 341 PRINTS PR00412 Epoxide hydrolase signature 315 337 7.4E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_08380 dc4b298cc76aca8c63463b2afd7d91ea 341 PRINTS PR00412 Epoxide hydrolase signature 145 158 7.4E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 330 2.6E-40 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 Gene3D G3DSA:3.30.565.10 2 217 1.8E-66 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 Gene3D G3DSA:3.30.230.10 218 330 7.2E-40 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 SMART SM00853 428 571 7.0E-56 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 311 2.2E-97 T 13-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 Gene3D G3DSA:2.30.42.20 430 608 3.9E-59 T 13-10-2018 P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 SUPERFAMILY SSF54211 192 331 2.35E-40 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 120 2.5E-11 T 13-10-2018 P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 SMART SM01340 213 331 1.4E-61 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 Gene3D G3DSA:3.30.1370.100 471 566 3.9E-59 T 13-10-2018 P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 611 28.876 T 13-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 SUPERFAMILY SSF55874 3 205 2.62E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 13-10-2018 IPR014762 DNA mismatch repair, conserved site P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 Pfam PF08676 MutL C terminal dimerisation domain 424 571 7.2E-52 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 P40_03625 a891decc30eefbd9f4255a5bfc6bfc97 615 SUPERFAMILY SSF118116 424 613 3.27E-62 T 13-10-2018 IPR037198 MutL, C-terminal domain superfamily P40_10460 c19bb96c587502dec866102b53965a4d 466 Pfam PF01425 Amidase 27 446 8.0E-104 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_10460 c19bb96c587502dec866102b53965a4d 466 ProSitePatterns PS00571 Amidases signature. 153 184 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 P40_10460 c19bb96c587502dec866102b53965a4d 466 SUPERFAMILY SSF75304 5 465 2.22E-131 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_10460 c19bb96c587502dec866102b53965a4d 466 Gene3D G3DSA:3.90.1300.10 6 466 3.9E-129 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_06580 8a9a7fb94be80e97e5fb42efb746ff0b 256 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 256 108.691 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 P40_06580 8a9a7fb94be80e97e5fb42efb746ff0b 256 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 1.8E-63 T 13-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 P40_06580 8a9a7fb94be80e97e5fb42efb746ff0b 256 PIRSF PIRSF000386 1 254 2.7E-94 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 P40_06580 8a9a7fb94be80e97e5fb42efb746ff0b 256 Gene3D G3DSA:3.40.1280.10 1 164 3.1E-65 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal P40_06580 8a9a7fb94be80e97e5fb42efb746ff0b 256 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 230 1.4E-90 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 P40_06580 8a9a7fb94be80e97e5fb42efb746ff0b 256 Gene3D G3DSA:1.10.1270.20 165 256 3.7E-28 T 13-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 P40_06580 8a9a7fb94be80e97e5fb42efb746ff0b 256 SUPERFAMILY SSF75217 1 244 1.77E-93 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases P40_06485 3832d0e7741280a8d2b49d1646f6de95 517 SUPERFAMILY SSF49299 293 383 4.45E-5 T 13-10-2018 IPR035986 PKD domain superfamily P40_06485 3832d0e7741280a8d2b49d1646f6de95 517 Gene3D G3DSA:2.60.40.10 291 382 7.7E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold P40_16420 001b98a1d347c15caba5ea2991304307 387 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 327 6.9E-129 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 P40_16420 001b98a1d347c15caba5ea2991304307 387 SUPERFAMILY SSF55307 205 321 3.89E-42 T 13-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 P40_16420 001b98a1d347c15caba5ea2991304307 387 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 173 1.1E-39 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 P40_16420 001b98a1d347c15caba5ea2991304307 387 SMART SM00864 14 206 9.6E-116 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 P40_16420 001b98a1d347c15caba5ea2991304307 387 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 360 37.688 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 P40_16420 001b98a1d347c15caba5ea2991304307 387 ProSitePatterns PS01135 FtsZ protein signature 2. 98 119 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 P40_16420 001b98a1d347c15caba5ea2991304307 387 Pfam PF12327 FtsZ family, C-terminal domain 223 317 3.0E-33 T 13-10-2018 IPR024757 Cell division protein FtsZ, C-terminal P40_16420 001b98a1d347c15caba5ea2991304307 387 SUPERFAMILY SSF52490 14 209 2.88E-70 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 P40_16420 001b98a1d347c15caba5ea2991304307 387 Gene3D G3DSA:3.30.1330.20 222 332 3.7E-36 T 13-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 P40_16420 001b98a1d347c15caba5ea2991304307 387 ProSitePatterns PS01134 FtsZ protein signature 1. 45 79 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 P40_16420 001b98a1d347c15caba5ea2991304307 387 Gene3D G3DSA:3.40.50.1440 7 221 3.3E-81 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 P40_16420 001b98a1d347c15caba5ea2991304307 387 SMART SM00865 208 326 1.0E-49 T 13-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 P40_16420 001b98a1d347c15caba5ea2991304307 387 PRINTS PR00423 Cell division protein FtsZ signature 213 234 6.6E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 P40_16420 001b98a1d347c15caba5ea2991304307 387 PRINTS PR00423 Cell division protein FtsZ signature 99 119 6.6E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 P40_16420 001b98a1d347c15caba5ea2991304307 387 PRINTS PR00423 Cell division protein FtsZ signature 190 212 6.6E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 P40_16420 001b98a1d347c15caba5ea2991304307 387 PRINTS PR00423 Cell division protein FtsZ signature 127 148 6.6E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 P40_16020 5a8758c186c3aed24289de3bde876b5a 116 Gene3D G3DSA:3.30.160.170 17 112 1.1E-13 T 13-10-2018 IPR035924 FlaG-like superfamily P40_16020 5a8758c186c3aed24289de3bde876b5a 116 Pfam PF03646 FlaG protein 35 112 2.2E-17 T 13-10-2018 IPR005186 FlaG protein P40_16020 5a8758c186c3aed24289de3bde876b5a 116 SUPERFAMILY SSF160214 37 113 2.09E-19 T 13-10-2018 IPR035924 FlaG-like superfamily P40_06280 f09818cb7617390e9478ffe8cd6577d9 788 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 17 780 0.0 T 13-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 P40_06280 f09818cb7617390e9478ffe8cd6577d9 788 Gene3D G3DSA:2.140.10.10 157 548 3.5E-119 T 13-10-2018 P40_06280 f09818cb7617390e9478ffe8cd6577d9 788 Pfam PF01011 PQQ enzyme repeat 712 745 3.4E-5 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_06280 f09818cb7617390e9478ffe8cd6577d9 788 Pfam PF01011 PQQ enzyme repeat 432 459 2.2E-5 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_06280 f09818cb7617390e9478ffe8cd6577d9 788 Pfam PF13360 PQQ-like domain 213 374 7.9E-8 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_06280 f09818cb7617390e9478ffe8cd6577d9 788 SUPERFAMILY SSF50998 163 766 4.84E-145 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily P40_06280 f09818cb7617390e9478ffe8cd6577d9 788 SMART SM00564 398 449 4.1 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_06280 f09818cb7617390e9478ffe8cd6577d9 788 SMART SM00564 330 371 450.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_06280 f09818cb7617390e9478ffe8cd6577d9 788 SMART SM00564 220 251 5.7E-7 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_06280 f09818cb7617390e9478ffe8cd6577d9 788 SMART SM00564 702 735 0.076 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_06280 f09818cb7617390e9478ffe8cd6577d9 788 SMART SM00564 635 674 850.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_06280 f09818cb7617390e9478ffe8cd6577d9 788 Gene3D G3DSA:2.140.10.10 555 781 1.6E-33 T 13-10-2018 P40_10890 fdf6d484d21160d406d0f77f9a114dc1 438 Gene3D G3DSA:3.40.50.12160 4 123 1.4E-29 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily P40_10890 fdf6d484d21160d406d0f77f9a114dc1 438 Gene3D G3DSA:2.40.50.140 376 438 1.1E-16 T 13-10-2018 P40_10890 fdf6d484d21160d406d0f77f9a114dc1 438 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 140 160 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 P40_10890 fdf6d484d21160d406d0f77f9a114dc1 438 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 434 2.0E-105 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 P40_10890 fdf6d484d21160d406d0f77f9a114dc1 438 SMART SM00729 136 361 4.1E-51 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 P40_10890 fdf6d484d21160d406d0f77f9a114dc1 438 Pfam PF04055 Radical SAM superfamily 142 319 2.8E-29 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P40_10890 fdf6d484d21160d406d0f77f9a114dc1 438 SUPERFAMILY SSF102114 119 365 1.7E-52 T 13-10-2018 P40_10890 fdf6d484d21160d406d0f77f9a114dc1 438 Gene3D G3DSA:3.80.30.20 134 375 2.4E-71 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe P40_10890 fdf6d484d21160d406d0f77f9a114dc1 438 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 3 436 61.403 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 P40_10890 fdf6d484d21160d406d0f77f9a114dc1 438 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 4 433 1.6E-176 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 P40_10890 fdf6d484d21160d406d0f77f9a114dc1 438 Pfam PF00919 Uncharacterized protein family UPF0004 4 94 7.8E-21 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 P40_20370 055509bc2ababfb2d9c88f1992c76570 302 Pfam PF00892 EamA-like transporter family 151 281 2.0E-23 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_20370 055509bc2ababfb2d9c88f1992c76570 302 Pfam PF00892 EamA-like transporter family 2 135 5.9E-21 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_20370 055509bc2ababfb2d9c88f1992c76570 302 SUPERFAMILY SSF103481 36 138 3.53E-12 T 13-10-2018 P40_20370 055509bc2ababfb2d9c88f1992c76570 302 SUPERFAMILY SSF103481 185 284 1.07E-13 T 13-10-2018 P40_06730 cce64d65f1a1152086e0a088e01e4480 299 Pfam PF13432 Tetratricopeptide repeat 222 282 5.6E-7 T 13-10-2018 P40_06730 cce64d65f1a1152086e0a088e01e4480 299 Pfam PF12385 Papain-like cysteine protease AvrRpt2 31 146 1.7E-6 T 13-10-2018 IPR022118 Peptidase C70, AvrRpt2 P40_06730 cce64d65f1a1152086e0a088e01e4480 299 Gene3D G3DSA:3.90.70.10 41 180 9.6E-9 T 13-10-2018 P40_06730 cce64d65f1a1152086e0a088e01e4480 299 SUPERFAMILY SSF48452 196 288 1.97E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_06730 cce64d65f1a1152086e0a088e01e4480 299 Gene3D G3DSA:1.25.40.10 188 287 2.9E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_06730 cce64d65f1a1152086e0a088e01e4480 299 SMART SM00028 249 282 0.28 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_06730 cce64d65f1a1152086e0a088e01e4480 299 SMART SM00028 215 248 3.7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_02020 94341d2e81614dccb29796b236da8298 1018 SUPERFAMILY SSF82693 140 325 1.1E-16 T 13-10-2018 P40_02020 94341d2e81614dccb29796b236da8298 1018 Gene3D G3DSA:3.30.70.1320 138 328 8.3E-257 T 13-10-2018 P40_02020 94341d2e81614dccb29796b236da8298 1018 Gene3D G3DSA:3.30.70.1430 557 655 8.3E-257 T 13-10-2018 P40_02020 94341d2e81614dccb29796b236da8298 1018 SUPERFAMILY SSF82693 42 136 1.52E-20 T 13-10-2018 P40_02020 94341d2e81614dccb29796b236da8298 1018 Pfam PF00873 AcrB/AcrD/AcrF family 6 1008 1.2E-172 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_02020 94341d2e81614dccb29796b236da8298 1018 Gene3D G3DSA:3.30.2090.10 707 795 8.3E-257 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_02020 94341d2e81614dccb29796b236da8298 1018 Gene3D G3DSA:1.20.1640.10 13 505 8.3E-257 T 13-10-2018 P40_02020 94341d2e81614dccb29796b236da8298 1018 SUPERFAMILY SSF82714 709 795 1.2E-16 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_02020 94341d2e81614dccb29796b236da8298 1018 Gene3D G3DSA:3.30.70.1430 42 803 8.3E-257 T 13-10-2018 P40_02020 94341d2e81614dccb29796b236da8298 1018 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.1E-21 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_02020 94341d2e81614dccb29796b236da8298 1018 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.1E-21 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_02020 94341d2e81614dccb29796b236da8298 1018 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.1E-21 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_02020 94341d2e81614dccb29796b236da8298 1018 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.1E-21 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_02020 94341d2e81614dccb29796b236da8298 1018 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.1E-21 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_02020 94341d2e81614dccb29796b236da8298 1018 SUPERFAMILY SSF82866 791 1013 6.8E-48 T 13-10-2018 P40_02020 94341d2e81614dccb29796b236da8298 1018 Gene3D G3DSA:3.30.2090.10 181 270 8.3E-257 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_02020 94341d2e81614dccb29796b236da8298 1018 SUPERFAMILY SSF82866 303 486 1.57E-36 T 13-10-2018 P40_02020 94341d2e81614dccb29796b236da8298 1018 Gene3D G3DSA:3.30.70.1440 656 855 8.3E-257 T 13-10-2018 P40_02020 94341d2e81614dccb29796b236da8298 1018 SUPERFAMILY SSF82714 187 267 3.92E-12 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_02020 94341d2e81614dccb29796b236da8298 1018 Gene3D G3DSA:1.20.1640.10 506 1007 8.3E-257 T 13-10-2018 P40_21520 a44bd501bf8a7ae2cc30f833603a66a5 176 Gene3D G3DSA:1.10.10.10 15 166 5.3E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_21520 a44bd501bf8a7ae2cc30f833603a66a5 176 Pfam PF01047 MarR family 53 109 4.1E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_21520 a44bd501bf8a7ae2cc30f833603a66a5 176 SMART SM00347 46 146 4.8E-17 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_21520 a44bd501bf8a7ae2cc30f833603a66a5 176 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site P40_21520 a44bd501bf8a7ae2cc30f833603a66a5 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 6.8E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_21520 a44bd501bf8a7ae2cc30f833603a66a5 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 6.8E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_21520 a44bd501bf8a7ae2cc30f833603a66a5 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 6.8E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_21520 a44bd501bf8a7ae2cc30f833603a66a5 176 SUPERFAMILY SSF46785 22 160 1.24E-27 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_15080 cb2416f780a37b69ae3d3b6b4dc0ac81 425 SUPERFAMILY SSF69304 148 423 9.15E-56 T 13-10-2018 P40_15080 cb2416f780a37b69ae3d3b6b4dc0ac81 425 Gene3D G3DSA:3.40.50.10070 17 158 8.3E-44 T 13-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 P40_15080 cb2416f780a37b69ae3d3b6b4dc0ac81 425 Pfam PF04052 TolB amino-terminal domain 23 123 1.2E-28 T 13-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 P40_15080 cb2416f780a37b69ae3d3b6b4dc0ac81 425 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 422 1.1E-153 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 P40_15080 cb2416f780a37b69ae3d3b6b4dc0ac81 425 Gene3D G3DSA:2.120.10.30 159 425 9.8E-90 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_15080 cb2416f780a37b69ae3d3b6b4dc0ac81 425 SUPERFAMILY SSF52964 26 155 1.57E-37 T 13-10-2018 P40_15080 cb2416f780a37b69ae3d3b6b4dc0ac81 425 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 2 421 45.397 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 P40_15080 cb2416f780a37b69ae3d3b6b4dc0ac81 425 Pfam PF07676 WD40-like Beta Propeller Repeat 275 311 1.3E-9 T 13-10-2018 IPR011659 WD40-like Beta Propeller P40_15080 cb2416f780a37b69ae3d3b6b4dc0ac81 425 Pfam PF07676 WD40-like Beta Propeller Repeat 238 267 4.8E-9 T 13-10-2018 IPR011659 WD40-like Beta Propeller P40_15080 cb2416f780a37b69ae3d3b6b4dc0ac81 425 Pfam PF07676 WD40-like Beta Propeller Repeat 320 353 0.0023 T 13-10-2018 IPR011659 WD40-like Beta Propeller P40_15080 cb2416f780a37b69ae3d3b6b4dc0ac81 425 Pfam PF07676 WD40-like Beta Propeller Repeat 187 223 1.8E-10 T 13-10-2018 IPR011659 WD40-like Beta Propeller P40_03205 2c497fa33aa5737825b15361ef2083da 255 SMART SM00342 165 247 5.0E-16 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_03205 2c497fa33aa5737825b15361ef2083da 255 Pfam PF12833 Helix-turn-helix domain 173 245 1.8E-15 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_03205 2c497fa33aa5737825b15361ef2083da 255 Gene3D G3DSA:1.10.10.60 147 248 1.2E-18 T 13-10-2018 P40_03205 2c497fa33aa5737825b15361ef2083da 255 SUPERFAMILY SSF46689 202 251 2.37E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_12740 8b5b569856a5b96fcdf83daec312f319 302 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 34 164 1.0E-60 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 P40_12740 8b5b569856a5b96fcdf83daec312f319 302 Gene3D G3DSA:1.10.8.300 196 298 6.4E-22 T 13-10-2018 P40_12740 8b5b569856a5b96fcdf83daec312f319 302 SMART SM00382 31 172 0.0015 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_12740 8b5b569856a5b96fcdf83daec312f319 302 SUPERFAMILY SSF52540 5 278 3.32E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_12740 8b5b569856a5b96fcdf83daec312f319 302 PIRSF PIRSF002849 1 302 7.4E-116 T 13-10-2018 P40_12740 8b5b569856a5b96fcdf83daec312f319 302 Gene3D G3DSA:3.40.50.300 15 180 6.0E-42 T 13-10-2018 P40_12245 f91f5e1bff7abe33af952e2677189d8b 702 Pfam PF13205 Bacterial Ig-like domain 44 144 2.2E-7 T 13-10-2018 IPR032812 SbsA, Ig-like domain P40_12245 f91f5e1bff7abe33af952e2677189d8b 702 Pfam PF13205 Bacterial Ig-like domain 181 261 9.2E-7 T 13-10-2018 IPR032812 SbsA, Ig-like domain P40_20025 382f051f7230c98a12dfc2a6be55709c 394 SUPERFAMILY SSF46894 326 391 1.5E-10 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_20025 382f051f7230c98a12dfc2a6be55709c 394 Gene3D G3DSA:1.10.10.10 287 393 1.0E-10 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_20025 382f051f7230c98a12dfc2a6be55709c 394 SMART SM00421 332 389 2.4E-4 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_18560 2d8e8a504c636fd8115f324f1018b5f1 645 Gene3D G3DSA:3.30.300.30 515 645 1.9E-27 T 13-10-2018 P40_18560 2d8e8a504c636fd8115f324f1018b5f1 645 Pfam PF13193 AMP-binding enzyme C-terminal domain 528 606 1.1E-22 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_18560 2d8e8a504c636fd8115f324f1018b5f1 645 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 80 3.0E-21 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 P40_18560 2d8e8a504c636fd8115f324f1018b5f1 645 Pfam PF00501 AMP-binding enzyme 84 519 5.4E-92 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_18560 2d8e8a504c636fd8115f324f1018b5f1 645 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 640 0.0 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 P40_18560 2d8e8a504c636fd8115f324f1018b5f1 645 SUPERFAMILY SSF56801 13 639 9.81E-180 T 13-10-2018 P40_18560 2d8e8a504c636fd8115f324f1018b5f1 645 Gene3D G3DSA:3.40.50.12780 50 512 3.8E-108 T 13-10-2018 P40_18560 2d8e8a504c636fd8115f324f1018b5f1 645 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 642 52.627 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 P40_10345 c07114fef67445faf07365284c12f9b7 270 Pfam PF13614 AAA domain 2 151 3.4E-23 T 13-10-2018 IPR025669 AAA domain P40_10345 c07114fef67445faf07365284c12f9b7 270 SUPERFAMILY SSF52540 1 262 7.88E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10345 c07114fef67445faf07365284c12f9b7 270 Gene3D G3DSA:3.40.50.300 1 262 6.8E-43 T 13-10-2018 P40_11745 f9b8fe8c5975fec49fa0ab10bd9658f2 832 Pfam PF08482 ATP-dependent helicase C-terminal 684 816 2.5E-45 T 13-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal P40_11745 f9b8fe8c5975fec49fa0ab10bd9658f2 832 Gene3D G3DSA:3.40.50.300 3 187 1.1E-53 T 13-10-2018 P40_11745 f9b8fe8c5975fec49fa0ab10bd9658f2 832 Pfam PF00271 Helicase conserved C-terminal domain 207 329 1.8E-12 T 13-10-2018 IPR001650 Helicase, C-terminal P40_11745 f9b8fe8c5975fec49fa0ab10bd9658f2 832 Gene3D G3DSA:1.20.120.1080 372 466 7.8E-12 T 13-10-2018 P40_11745 f9b8fe8c5975fec49fa0ab10bd9658f2 832 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 12 827 1.4E-259 T 13-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 P40_11745 f9b8fe8c5975fec49fa0ab10bd9658f2 832 Gene3D G3DSA:3.40.50.300 188 346 4.9E-44 T 13-10-2018 P40_11745 f9b8fe8c5975fec49fa0ab10bd9658f2 832 Pfam PF04408 Helicase associated domain (HA2) 388 444 1.8E-10 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 P40_11745 f9b8fe8c5975fec49fa0ab10bd9658f2 832 SUPERFAMILY SSF52540 24 340 1.8E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_11745 f9b8fe8c5975fec49fa0ab10bd9658f2 832 PIRSF PIRSF005496 8 830 3.7E-269 T 13-10-2018 P40_11745 f9b8fe8c5975fec49fa0ab10bd9658f2 832 Pfam PF07652 Flavivirus DEAD domain 31 135 2.3E-4 T 13-10-2018 IPR011492 DEAD box, Flavivirus GO:0005524|GO:0008026 KEGG: 00230+3.6.1.15|KEGG: 00730+3.6.1.15|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210 P40_11745 f9b8fe8c5975fec49fa0ab10bd9658f2 832 SMART SM00847 387 477 1.3E-12 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 P40_11745 f9b8fe8c5975fec49fa0ab10bd9658f2 832 SMART SM00487 10 196 1.1E-14 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_11745 f9b8fe8c5975fec49fa0ab10bd9658f2 832 SMART SM00490 232 329 7.4E-17 T 13-10-2018 IPR001650 Helicase, C-terminal P40_03770 a6308920e4c104c35ebadfbdc61b51a2 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 148 8.3E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_03770 a6308920e4c104c35ebadfbdc61b51a2 707 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 690 707 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site P40_03770 a6308920e4c104c35ebadfbdc61b51a2 707 Pfam PF00593 TonB dependent receptor 252 705 3.1E-36 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_03770 a6308920e4c104c35ebadfbdc61b51a2 707 Gene3D G3DSA:2.40.170.20 162 707 5.2E-70 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_03770 a6308920e4c104c35ebadfbdc61b51a2 707 Gene3D G3DSA:2.170.130.10 30 153 3.1E-20 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_03770 a6308920e4c104c35ebadfbdc61b51a2 707 SUPERFAMILY SSF56935 20 707 1.61E-92 T 13-10-2018 P40_19675 be3e5d509ed8e78abdc7190f57cbaf2a 449 Pfam PF06123 Inner membrane protein CreD 7 439 2.6E-133 T 13-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD P40_19675 be3e5d509ed8e78abdc7190f57cbaf2a 449 PIRSF PIRSF004548 1 448 1.3E-122 T 13-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD P40_05295 261e4752c2955c54fe536a9f136dfdee 410 Pfam PF00270 DEAD/DEAH box helicase 47 221 1.1E-47 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 P40_05295 261e4752c2955c54fe536a9f136dfdee 410 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 178 186 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site P40_05295 261e4752c2955c54fe536a9f136dfdee 410 Gene3D G3DSA:3.40.50.300 246 409 2.7E-49 T 13-10-2018 P40_05295 261e4752c2955c54fe536a9f136dfdee 410 SMART SM00490 285 366 1.1E-32 T 13-10-2018 IPR001650 Helicase, C-terminal P40_05295 261e4752c2955c54fe536a9f136dfdee 410 Pfam PF00271 Helicase conserved C-terminal domain 257 366 2.5E-31 T 13-10-2018 IPR001650 Helicase, C-terminal P40_05295 261e4752c2955c54fe536a9f136dfdee 410 SMART SM00487 42 249 1.2E-51 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_05295 261e4752c2955c54fe536a9f136dfdee 410 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 22 404 53.634 T 13-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 P40_05295 261e4752c2955c54fe536a9f136dfdee 410 SUPERFAMILY SSF52540 98 384 6.39E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_05295 261e4752c2955c54fe536a9f136dfdee 410 Gene3D G3DSA:3.40.50.300 7 245 4.8E-72 T 13-10-2018 P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 Gene3D G3DSA:3.30.565.10 274 428 1.1E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 Pfam PF11808 Domain of unknown function (DUF3329) 7 87 1.4E-16 T 13-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 SMART SM00388 202 269 9.0E-22 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 SUPERFAMILY SSF55874 259 424 3.8E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 Gene3D G3DSA:3.30.450.20 98 179 1.8E-10 T 13-10-2018 P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 Gene3D G3DSA:1.10.287.130 196 269 3.9E-24 T 13-10-2018 P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 422 1.8E-129 T 13-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 SUPERFAMILY SSF55785 82 171 1.15E-9 T 13-10-2018 IPR035965 PAS domain superfamily P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 SUPERFAMILY SSF47384 189 269 4.12E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 425 2.5E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 Pfam PF00989 PAS fold 100 175 1.4E-6 T 13-10-2018 IPR013767 PAS fold GO:0006355 P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 SMART SM00387 314 426 1.4E-36 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 202 268 1.0E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 1.4E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 365 1.4E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 1.4E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 379 1.4E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_21200 b1aaf54a9d4fad4c6120e2c8992852f0 436 SMART SM00091 95 162 5.3E-6 T 13-10-2018 IPR000014 PAS domain P40_11445 bc3fe220ccff080af372892574365c05 216 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 26 216 44.708 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 P40_11445 bc3fe220ccff080af372892574365c05 216 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 113 124 - T 13-10-2018 IPR018215 ClpP, Ser active site P40_11445 bc3fe220ccff080af372892574365c05 216 Gene3D G3DSA:3.90.226.10 15 216 8.6E-85 T 13-10-2018 P40_11445 bc3fe220ccff080af372892574365c05 216 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 25 215 8.8E-107 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 P40_11445 bc3fe220ccff080af372892574365c05 216 SUPERFAMILY SSF52096 33 214 6.63E-75 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_11445 bc3fe220ccff080af372892574365c05 216 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 135 148 - T 13-10-2018 IPR033135 ClpP, histidine active site P40_11445 bc3fe220ccff080af372892574365c05 216 PRINTS PR00127 Clp protease catalytic subunit P signature 191 210 2.0E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 P40_11445 bc3fe220ccff080af372892574365c05 216 PRINTS PR00127 Clp protease catalytic subunit P signature 82 102 2.0E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 P40_11445 bc3fe220ccff080af372892574365c05 216 PRINTS PR00127 Clp protease catalytic subunit P signature 42 57 2.0E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 P40_11445 bc3fe220ccff080af372892574365c05 216 PRINTS PR00127 Clp protease catalytic subunit P signature 113 130 2.0E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 P40_11445 bc3fe220ccff080af372892574365c05 216 PRINTS PR00127 Clp protease catalytic subunit P signature 134 153 2.0E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 P40_11445 bc3fe220ccff080af372892574365c05 216 Pfam PF00574 Clp protease 36 215 7.6E-89 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA P40_07715 9cbd46587f3950e564fcb307cf02bbeb 177 Gene3D G3DSA:3.40.250.10 37 170 1.6E-15 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_07715 9cbd46587f3950e564fcb307cf02bbeb 177 Pfam PF00581 Rhodanese-like domain 51 163 6.2E-7 T 13-10-2018 IPR001763 Rhodanese-like domain P40_07715 9cbd46587f3950e564fcb307cf02bbeb 177 SUPERFAMILY SSF52821 46 170 6.68E-19 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_07715 9cbd46587f3950e564fcb307cf02bbeb 177 TIGRFAM TIGR03865 PQQ_CXXCW: PQQ-dependent catabolism-associated CXXCW motif protein 19 173 2.8E-55 T 13-10-2018 IPR022376 PQQ-dependent catabolism-associated CXXCW motif P40_00660 a04ec1ca72ccf84855701268e3ae3533 356 Gene3D G3DSA:1.10.10.10 314 353 3.9E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_00660 a04ec1ca72ccf84855701268e3ae3533 356 Pfam PF02481 DNA recombination-mediator protein A 70 275 5.1E-72 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 P40_00660 a04ec1ca72ccf84855701268e3ae3533 356 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 284 2.3E-71 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 P40_00660 a04ec1ca72ccf84855701268e3ae3533 356 Gene3D G3DSA:3.40.50.450 2 288 2.2E-93 T 13-10-2018 P40_00660 a04ec1ca72ccf84855701268e3ae3533 356 SUPERFAMILY SSF102405 79 285 8.09E-42 T 13-10-2018 P40_20340 416519aec874433c7e53aff8b2e66a34 419 Pfam PF00909 Ammonium Transporter Family 17 413 8.7E-96 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 P40_20340 416519aec874433c7e53aff8b2e66a34 419 ProSitePatterns PS01219 Ammonium transporters signature. 174 199 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 P40_20340 416519aec874433c7e53aff8b2e66a34 419 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 10 416 3.9E-207 T 13-10-2018 IPR019879 Ammonium transporter, marine subtype P40_20340 416519aec874433c7e53aff8b2e66a34 419 SUPERFAMILY SSF111352 10 394 3.27E-101 T 13-10-2018 P40_20340 416519aec874433c7e53aff8b2e66a34 419 Gene3D G3DSA:1.10.3430.10 1 418 8.9E-119 T 13-10-2018 IPR029020 Ammonium/urea transporter P40_12970 65f66e90ef505258df92407473c38769 945 SUPERFAMILY SSF52518 582 800 5.79E-52 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold P40_12970 65f66e90ef505258df92407473c38769 945 Gene3D G3DSA:3.40.50.11610 730 939 1.2E-169 T 13-10-2018 P40_12970 65f66e90ef505258df92407473c38769 945 SMART SM00861 600 793 3.4E-59 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain P40_12970 65f66e90ef505258df92407473c38769 945 Gene3D G3DSA:1.10.287.1150 89 171 5.3E-25 T 13-10-2018 P40_12970 65f66e90ef505258df92407473c38769 945 SUPERFAMILY SSF52518 126 548 7.74E-89 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold P40_12970 65f66e90ef505258df92407473c38769 945 Gene3D G3DSA:3.40.50.12470 563 809 1.2E-169 T 13-10-2018 P40_12970 65f66e90ef505258df92407473c38769 945 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.8E-17 T 13-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 P40_12970 65f66e90ef505258df92407473c38769 945 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 942 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 P40_12970 65f66e90ef505258df92407473c38769 945 Gene3D G3DSA:3.40.50.970 172 534 1.9E-151 T 13-10-2018 P40_12970 65f66e90ef505258df92407473c38769 945 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 798 942 7.3E-53 T 13-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 P40_12970 65f66e90ef505258df92407473c38769 945 PIRSF PIRSF000157 1 944 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 P40_12970 65f66e90ef505258df92407473c38769 945 Pfam PF02779 Transketolase, pyrimidine binding domain 599 794 2.0E-64 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain P40_12970 65f66e90ef505258df92407473c38769 945 Pfam PF00676 Dehydrogenase E1 component 230 523 4.6E-53 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 P40_01870 481ebea2d705cde57f46cc85db09d92a 406 Gene3D G3DSA:3.40.50.10540 8 394 1.6E-116 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_01870 481ebea2d705cde57f46cc85db09d92a 406 SUPERFAMILY SSF89796 6 400 2.49E-120 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_01870 481ebea2d705cde57f46cc85db09d92a 406 Gene3D G3DSA:3.30.1540.10 235 327 1.6E-116 T 13-10-2018 P40_01870 481ebea2d705cde57f46cc85db09d92a 406 Pfam PF02515 CoA-transferase family III 8 377 3.8E-118 T 13-10-2018 IPR003673 CoA-transferase family III GO:0003824 P40_03825 53a04fd317122ed802b587c0640ead70 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 51.998 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 P40_03825 53a04fd317122ed802b587c0640ead70 418 Gene3D G3DSA:3.90.1150.10 10 394 7.3E-185 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_03825 53a04fd317122ed802b587c0640ead70 418 Pfam PF00464 Serine hydroxymethyltransferase 9 386 6.1E-178 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 P40_03825 53a04fd317122ed802b587c0640ead70 418 PIRSF PIRSF000412 1 418 7.4E-168 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 P40_03825 53a04fd317122ed802b587c0640ead70 418 SUPERFAMILY SSF53383 6 416 4.54E-180 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_03825 53a04fd317122ed802b587c0640ead70 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 13-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 P40_03825 53a04fd317122ed802b587c0640ead70 418 Gene3D G3DSA:3.40.640.10 37 289 7.3E-185 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_05220 0578d290a085f1ff0eab1be4518b1d18 279 SUPERFAMILY SSF161098 18 267 4.97E-53 T 13-10-2018 IPR035906 MetI-like superfamily P40_05220 0578d290a085f1ff0eab1be4518b1d18 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 277 5.6E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_05220 0578d290a085f1ff0eab1be4518b1d18 279 Gene3D G3DSA:1.10.3720.10 15 275 1.2E-63 T 13-10-2018 IPR035906 MetI-like superfamily P40_05220 0578d290a085f1ff0eab1be4518b1d18 279 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 11 274 9.6E-111 T 13-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 P40_05220 0578d290a085f1ff0eab1be4518b1d18 279 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 8 271 4.3E-93 T 13-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 P40_01675 6d7216f6d63ad2845c1cbbcb7a226469 403 Gene3D G3DSA:3.30.1540.10 230 322 2.2E-118 T 13-10-2018 P40_01675 6d7216f6d63ad2845c1cbbcb7a226469 403 Pfam PF02515 CoA-transferase family III 5 370 1.4E-113 T 13-10-2018 IPR003673 CoA-transferase family III GO:0003824 P40_01675 6d7216f6d63ad2845c1cbbcb7a226469 403 Gene3D G3DSA:3.40.50.10540 5 388 2.2E-118 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_01675 6d7216f6d63ad2845c1cbbcb7a226469 403 SUPERFAMILY SSF89796 1 394 7.98E-126 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_05225 566ea074dab231cfbee1db32b8871081 333 Gene3D G3DSA:3.40.190.10 113 324 1.3E-122 T 13-10-2018 P40_05225 566ea074dab231cfbee1db32b8871081 333 Gene3D G3DSA:3.40.190.10 26 294 1.3E-122 T 13-10-2018 P40_05225 566ea074dab231cfbee1db32b8871081 333 Pfam PF13531 Bacterial extracellular solute-binding protein 34 279 1.1E-36 T 13-10-2018 P40_05225 566ea074dab231cfbee1db32b8871081 333 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 18 325 2.0E-139 T 13-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 P40_05225 566ea074dab231cfbee1db32b8871081 333 SUPERFAMILY SSF53850 18 325 5.44E-80 T 13-10-2018 P40_09200 f8e8204f77417f6a7f0bcfc8600df899 165 Pfam PF03938 Outer membrane protein (OmpH-like) 7 161 6.0E-27 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 P40_09200 f8e8204f77417f6a7f0bcfc8600df899 165 SUPERFAMILY SSF111384 18 162 1.83E-27 T 13-10-2018 P40_09200 f8e8204f77417f6a7f0bcfc8600df899 165 Gene3D G3DSA:3.30.910.20 11 165 1.5E-28 T 13-10-2018 IPR024930 Skp domain superfamily P40_09200 f8e8204f77417f6a7f0bcfc8600df899 165 SMART SM00935 7 162 9.7E-37 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 100 109 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 10 140 6.4E-35 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 Gene3D G3DSA:3.30.310.50 370 460 1.7E-22 T 13-10-2018 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 Gene3D G3DSA:3.40.120.10 251 368 1.6E-37 T 13-10-2018 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 SUPERFAMILY SSF53738 258 363 3.81E-32 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 SUPERFAMILY SSF53738 6 141 6.28E-38 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 Gene3D G3DSA:3.40.120.10 2 152 2.1E-55 T 13-10-2018 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 204 217 3.9E-24 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 3.9E-24 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 3.9E-24 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 3.9E-24 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 SUPERFAMILY SSF55957 367 455 3.27E-20 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 444 5.1E-8 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 362 5.9E-22 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 Gene3D G3DSA:3.40.120.10 172 249 6.2E-32 T 13-10-2018 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 SUPERFAMILY SSF53738 154 255 8.63E-31 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08160 76b4d7e351654ac4b0ab24463fe93441 463 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 253 8.6E-28 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_14240 b94069ebee98fa4f7ea5b9500b1b6d7c 880 Gene3D G3DSA:1.20.1250.20 11 188 4.9E-42 T 13-10-2018 P40_14240 b94069ebee98fa4f7ea5b9500b1b6d7c 880 Pfam PF07690 Major Facilitator Superfamily 462 836 1.1E-15 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_14240 b94069ebee98fa4f7ea5b9500b1b6d7c 880 Pfam PF07690 Major Facilitator Superfamily 20 296 3.3E-39 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_14240 b94069ebee98fa4f7ea5b9500b1b6d7c 880 TIGRFAM TIGR00886 2A0108: nitrite transporter 452 832 1.9E-100 T 13-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 P40_14240 b94069ebee98fa4f7ea5b9500b1b6d7c 880 Gene3D G3DSA:1.20.1250.20 200 410 2.1E-58 T 13-10-2018 P40_14240 b94069ebee98fa4f7ea5b9500b1b6d7c 880 Gene3D G3DSA:1.20.1250.20 424 653 1.7E-83 T 13-10-2018 P40_14240 b94069ebee98fa4f7ea5b9500b1b6d7c 880 SUPERFAMILY SSF103473 447 876 4.58E-38 T 13-10-2018 IPR036259 MFS transporter superfamily P40_14240 b94069ebee98fa4f7ea5b9500b1b6d7c 880 Gene3D G3DSA:1.20.1250.20 654 878 4.7E-68 T 13-10-2018 P40_14240 b94069ebee98fa4f7ea5b9500b1b6d7c 880 SUPERFAMILY SSF103473 10 404 5.75E-61 T 13-10-2018 IPR036259 MFS transporter superfamily P40_04285 2c69eb44787d3cbdb57100f18f91dc43 201 SUPERFAMILY SSF55729 5 179 6.78E-40 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_04285 2c69eb44787d3cbdb57100f18f91dc43 201 Pfam PF13302 Acetyltransferase (GNAT) domain 15 154 2.1E-20 T 13-10-2018 IPR000182 GNAT domain P40_04285 2c69eb44787d3cbdb57100f18f91dc43 201 Gene3D G3DSA:3.40.630.30 2 194 2.2E-45 T 13-10-2018 P40_13360 6e73e95979c1059c1e1755d424e1bd14 342 SMART SM00342 249 331 1.4E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_13360 6e73e95979c1059c1e1755d424e1bd14 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 205 1.8E-39 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_13360 6e73e95979c1059c1e1755d424e1bd14 342 Gene3D G3DSA:1.10.10.60 233 339 1.5E-20 T 13-10-2018 P40_13360 6e73e95979c1059c1e1755d424e1bd14 342 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 315 331 4.1E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_13360 6e73e95979c1059c1e1755d424e1bd14 342 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 315 4.1E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_13360 6e73e95979c1059c1e1755d424e1bd14 342 SUPERFAMILY SSF46689 285 335 8.96E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_13360 6e73e95979c1059c1e1755d424e1bd14 342 Pfam PF12833 Helix-turn-helix domain 255 332 1.4E-15 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_20905 60987f22914f3861a6afd83dad7227a3 932 Pfam PF00361 Proton-conducting membrane transporter 128 405 2.0E-62 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_20905 60987f22914f3861a6afd83dad7227a3 932 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 790 913 2.3E-35 T 13-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein P40_20905 60987f22914f3861a6afd83dad7227a3 932 Pfam PF13244 Domain of unknown function (DUF4040) 613 676 2.1E-19 T 13-10-2018 IPR025383 Domain of unknown function DUF4040 P40_20905 60987f22914f3861a6afd83dad7227a3 932 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 152 173 8.4E-37 T 13-10-2018 P40_20905 60987f22914f3861a6afd83dad7227a3 932 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 8.4E-37 T 13-10-2018 P40_20905 60987f22914f3861a6afd83dad7227a3 932 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 105 125 8.4E-37 T 13-10-2018 P40_20905 60987f22914f3861a6afd83dad7227a3 932 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 8.4E-37 T 13-10-2018 P40_20905 60987f22914f3861a6afd83dad7227a3 932 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 8.4E-37 T 13-10-2018 P40_20905 60987f22914f3861a6afd83dad7227a3 932 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 8.4E-37 T 13-10-2018 P40_20905 60987f22914f3861a6afd83dad7227a3 932 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 115 4.8E-11 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_08375 b23d96f16fce1d8d4bedff4acf3adcfe 155 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 110 1.2E-8 T 13-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 P40_08375 b23d96f16fce1d8d4bedff4acf3adcfe 155 SUPERFAMILY SSF51316 1 151 3.03E-29 T 13-10-2018 IPR011057 Mss4-like superfamily P40_08375 b23d96f16fce1d8d4bedff4acf3adcfe 155 Gene3D G3DSA:2.170.150.70 3 110 8.3E-13 T 13-10-2018 P40_16120 23449156214cef9b5ecf22099f557b66 260 SUPERFAMILY SSF117143 93 222 1.24E-35 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like P40_16120 23449156214cef9b5ecf22099f557b66 260 Pfam PF00460 Flagella basal body rod protein 5 35 2.1E-12 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 P40_16120 23449156214cef9b5ecf22099f557b66 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 6.5E-49 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G P40_16120 23449156214cef9b5ecf22099f557b66 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 2.9E-29 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G P40_16120 23449156214cef9b5ecf22099f557b66 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site P40_16120 23449156214cef9b5ecf22099f557b66 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 4.2E-25 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain P40_16120 23449156214cef9b5ecf22099f557b66 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 1.1E-116 T 13-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 P40_02740 92f10e961d21de6659a8415de4c7cce5 146 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 16 143 4.7E-45 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 P40_02740 92f10e961d21de6659a8415de4c7cce5 146 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 145 28.237 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 P40_09195 c67af9fec773d712ea7d422b2124a124 787 Gene3D G3DSA:3.10.20.310 359 436 8.6E-22 T 13-10-2018 P40_09195 c67af9fec773d712ea7d422b2124a124 787 Pfam PF07244 Surface antigen variable number repeat 103 182 3.8E-10 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 P40_09195 c67af9fec773d712ea7d422b2124a124 787 Pfam PF07244 Surface antigen variable number repeat 276 355 4.7E-13 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 P40_09195 c67af9fec773d712ea7d422b2124a124 787 Pfam PF07244 Surface antigen variable number repeat 358 432 4.2E-12 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 P40_09195 c67af9fec773d712ea7d422b2124a124 787 Pfam PF07244 Surface antigen variable number repeat 186 273 6.4E-18 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 P40_09195 c67af9fec773d712ea7d422b2124a124 787 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 34 787 1.6E-260 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 P40_09195 c67af9fec773d712ea7d422b2124a124 787 Gene3D G3DSA:3.10.20.310 28 101 1.2E-17 T 13-10-2018 P40_09195 c67af9fec773d712ea7d422b2124a124 787 Gene3D G3DSA:3.10.20.310 185 274 5.4E-24 T 13-10-2018 P40_09195 c67af9fec773d712ea7d422b2124a124 787 Gene3D G3DSA:3.10.20.310 275 357 5.6E-16 T 13-10-2018 P40_09195 c67af9fec773d712ea7d422b2124a124 787 PIRSF PIRSF006076 2 787 2.6E-250 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 P40_09195 c67af9fec773d712ea7d422b2124a124 787 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 9 787 24.494 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 P40_09195 c67af9fec773d712ea7d422b2124a124 787 Gene3D G3DSA:2.40.160.50 437 787 2.5E-108 T 13-10-2018 P40_09195 c67af9fec773d712ea7d422b2124a124 787 Pfam PF01103 Surface antigen 459 787 2.6E-82 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 P40_09195 c67af9fec773d712ea7d422b2124a124 787 Gene3D G3DSA:3.10.20.310 102 183 3.5E-16 T 13-10-2018 P40_11495 438cc15a907ea59d52e6bec37ea307ed 560 Gene3D G3DSA:3.40.50.620 3 341 5.9E-138 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_11495 438cc15a907ea59d52e6bec37ea307ed 560 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 1.8E-8 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P40_11495 438cc15a907ea59d52e6bec37ea307ed 560 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 1.8E-8 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P40_11495 438cc15a907ea59d52e6bec37ea307ed 560 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 1.8E-8 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P40_11495 438cc15a907ea59d52e6bec37ea307ed 560 Gene3D G3DSA:2.40.240.10 348 469 6.3E-77 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P40_11495 438cc15a907ea59d52e6bec37ea307ed 560 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_11495 438cc15a907ea59d52e6bec37ea307ed 560 Gene3D G3DSA:2.40.240.10 342 553 6.3E-77 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P40_11495 438cc15a907ea59d52e6bec37ea307ed 560 SUPERFAMILY SSF50715 340 555 2.62E-67 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P40_11495 438cc15a907ea59d52e6bec37ea307ed 560 SUPERFAMILY SSF52374 28 345 7.51E-97 T 13-10-2018 P40_11495 438cc15a907ea59d52e6bec37ea307ed 560 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 556 51.386 T 13-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 P40_11495 438cc15a907ea59d52e6bec37ea307ed 560 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 536 8.2E-58 T 13-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P40_11495 438cc15a907ea59d52e6bec37ea307ed 560 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 556 3.2E-232 T 13-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 P40_11495 438cc15a907ea59d52e6bec37ea307ed 560 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 5.6E-109 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 P40_05910 0334269844461dad0d6d3726e2e1fe26 513 SUPERFAMILY SSF48452 51 188 2.85E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05910 0334269844461dad0d6d3726e2e1fe26 513 Gene3D G3DSA:1.25.40.10 18 259 1.3E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_16130 026614cf60025eed1c2f2706986f05ab 393 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 375 1.4E-97 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G P40_16130 026614cf60025eed1c2f2706986f05ab 393 Gene3D G3DSA:2.60.98.20 140 275 2.2E-34 T 13-10-2018 IPR037058 Flagellar hook protein FlgE superfamily P40_16130 026614cf60025eed1c2f2706986f05ab 393 Pfam PF07559 Flagellar basal body protein FlaE 165 274 1.8E-24 T 13-10-2018 IPR011491 Flagellar hook protein FlgE P40_16130 026614cf60025eed1c2f2706986f05ab 393 Pfam PF00460 Flagella basal body rod protein 4 33 1.6E-10 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 P40_16130 026614cf60025eed1c2f2706986f05ab 393 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 315 392 8.2E-19 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain P40_16130 026614cf60025eed1c2f2706986f05ab 393 SUPERFAMILY SSF117143 72 354 1.57E-73 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like P40_00215 969508badf3a8b4ae71ecd6569aace9b 379 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 18 325 6.5E-60 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_00215 969508badf3a8b4ae71ecd6569aace9b 379 Gene3D G3DSA:3.40.190.10 120 260 1.1E-50 T 13-10-2018 P40_00215 969508badf3a8b4ae71ecd6569aace9b 379 Pfam PF16868 NMT1-like family 47 325 2.7E-23 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_00215 969508badf3a8b4ae71ecd6569aace9b 379 SUPERFAMILY SSF53850 32 327 8.78E-52 T 13-10-2018 P40_00215 969508badf3a8b4ae71ecd6569aace9b 379 Gene3D G3DSA:3.40.190.10 41 325 1.1E-50 T 13-10-2018 P40_15825 8966b8026618f0b5b37b007fb2258cbd 600 SUPERFAMILY SSF53901 313 514 1.08E-30 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_15825 8966b8026618f0b5b37b007fb2258cbd 600 Gene3D G3DSA:3.40.47.10 99 560 1.7E-80 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_15825 8966b8026618f0b5b37b007fb2258cbd 600 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 122 337 1.7E-9 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal P40_15825 8966b8026618f0b5b37b007fb2258cbd 600 SUPERFAMILY SSF53901 125 349 5.99E-25 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_15825 8966b8026618f0b5b37b007fb2258cbd 600 SMART SM00825 Beta-ketoacyl synthase 131 516 3.0E-4 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain P40_15825 8966b8026618f0b5b37b007fb2258cbd 600 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 385 467 4.4E-9 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal P40_12605 473da8ca9b655fb6318053bbc7359680 392 Gene3D G3DSA:1.20.140.10 235 392 1.5E-30 T 13-10-2018 P40_12605 473da8ca9b655fb6318053bbc7359680 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 6.9E-21 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_12605 473da8ca9b655fb6318053bbc7359680 392 SUPERFAMILY SSF56645 3 244 4.84E-73 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_12605 473da8ca9b655fb6318053bbc7359680 392 SUPERFAMILY SSF47203 231 390 7.61E-12 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_12605 473da8ca9b655fb6318053bbc7359680 392 Gene3D G3DSA:2.40.110.10 125 234 9.4E-39 T 13-10-2018 P40_12605 473da8ca9b655fb6318053bbc7359680 392 Gene3D G3DSA:1.10.540.10 5 120 5.7E-25 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_12605 473da8ca9b655fb6318053bbc7359680 392 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 389 2.3E-17 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_12605 473da8ca9b655fb6318053bbc7359680 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 120 6.1E-18 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_17175 cc645937c77729585094339108bc0a45 108 SUPERFAMILY SSF46785 15 106 6.72E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_17175 cc645937c77729585094339108bc0a45 108 Pfam PF01638 HxlR-like helix-turn-helix 25 104 5.8E-13 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type P40_17175 cc645937c77729585094339108bc0a45 108 Gene3D G3DSA:1.10.10.10 11 108 1.1E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_13440 22e6954ca70ba03eb99dc37720179544 834 Pfam PF07715 TonB-dependent Receptor Plug Domain 142 247 6.1E-18 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_13440 22e6954ca70ba03eb99dc37720179544 834 SUPERFAMILY SSF56935 127 834 2.09E-96 T 13-10-2018 P40_13440 22e6954ca70ba03eb99dc37720179544 834 Pfam PF00593 TonB dependent receptor 352 833 1.7E-41 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_13440 22e6954ca70ba03eb99dc37720179544 834 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 130 698 3.8E-97 T 13-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 P40_13440 22e6954ca70ba03eb99dc37720179544 834 Gene3D G3DSA:3.55.50.30 38 109 1.1E-23 T 13-10-2018 P40_13440 22e6954ca70ba03eb99dc37720179544 834 Gene3D G3DSA:2.170.130.10 138 262 1.5E-46 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_13440 22e6954ca70ba03eb99dc37720179544 834 Gene3D G3DSA:2.40.170.20 265 834 3.0E-120 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_13440 22e6954ca70ba03eb99dc37720179544 834 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 128 834 2.3E-152 T 13-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 P40_13440 22e6954ca70ba03eb99dc37720179544 834 SMART SM00965 60 111 2.1E-8 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 P40_05800 d65f508c3114d9ef61727c88873e7512 61 SUPERFAMILY SSF55424 15 59 8.93E-5 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P40_05800 d65f508c3114d9ef61727c88873e7512 61 Gene3D G3DSA:3.30.390.30 11 61 2.7E-10 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P40_17770 de3d48b9ddef38b163b12afe9b5de1ae 338 SUPERFAMILY SSF51735 1 182 3.44E-76 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_17770 de3d48b9ddef38b163b12afe9b5de1ae 338 Gene3D G3DSA:3.40.50.720 1 181 1.5E-78 T 13-10-2018 P40_17770 de3d48b9ddef38b163b12afe9b5de1ae 338 PIRSF PIRSF000116 201 333 2.5E-14 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 P40_17770 de3d48b9ddef38b163b12afe9b5de1ae 338 PIRSF PIRSF000116 4 206 1.0E-45 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 P40_17770 de3d48b9ddef38b163b12afe9b5de1ae 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 44.89 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 P40_17770 de3d48b9ddef38b163b12afe9b5de1ae 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 1.3E-131 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 P40_17770 de3d48b9ddef38b163b12afe9b5de1ae 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 2.2E-62 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 P40_17770 de3d48b9ddef38b163b12afe9b5de1ae 338 SUPERFAMILY SSF48179 183 332 1.31E-68 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_17770 de3d48b9ddef38b163b12afe9b5de1ae 338 Gene3D G3DSA:1.10.3730.40 182 338 1.9E-73 T 13-10-2018 P40_17770 de3d48b9ddef38b163b12afe9b5de1ae 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 5.8E-76 T 13-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 P40_12340 6f2d6dc758747a81cb50e7419ef10f34 628 SUPERFAMILY SSF69322 82 356 1.44E-10 T 13-10-2018 P40_12340 6f2d6dc758747a81cb50e7419ef10f34 628 SUPERFAMILY SSF53474 367 619 7.36E-65 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_12340 6f2d6dc758747a81cb50e7419ef10f34 628 Gene3D G3DSA:3.40.50.1820 359 625 2.7E-75 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_12340 6f2d6dc758747a81cb50e7419ef10f34 628 Pfam PF00326 Prolyl oligopeptidase family 414 619 3.3E-45 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 P40_11405 c5f657474597048267d042d830d3aebe 534 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 257 0.013 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 P40_11405 c5f657474597048267d042d830d3aebe 534 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 499 529 5.9E-5 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 P40_11405 c5f657474597048267d042d830d3aebe 534 Pfam PF00005 ABC transporter 297 448 4.2E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_11405 c5f657474597048267d042d830d3aebe 534 SUPERFAMILY SSF52540 3 250 5.44E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_11405 c5f657474597048267d042d830d3aebe 534 SMART SM00382 29 228 5.3E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_11405 c5f657474597048267d042d830d3aebe 534 SMART SM00382 305 497 9.9E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_11405 c5f657474597048267d042d830d3aebe 534 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_11405 c5f657474597048267d042d830d3aebe 534 Pfam PF00005 ABC transporter 21 178 3.2E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_11405 c5f657474597048267d042d830d3aebe 534 ProSitePatterns PS00211 ABC transporters family signature. 420 434 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_11405 c5f657474597048267d042d830d3aebe 534 SUPERFAMILY SSF52540 289 519 7.61E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_11405 c5f657474597048267d042d830d3aebe 534 Gene3D G3DSA:3.40.50.300 1 267 1.5E-76 T 13-10-2018 P40_11405 c5f657474597048267d042d830d3aebe 534 Gene3D G3DSA:3.40.50.300 268 534 8.9E-87 T 13-10-2018 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1036 0.0 T 13-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 Gene3D G3DSA:3.30.70.1440 673 870 1.5E-300 T 13-10-2018 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 SUPERFAMILY SSF82714 192 274 1.1E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 Gene3D G3DSA:3.30.70.1430 568 672 1.5E-300 T 13-10-2018 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 Gene3D G3DSA:1.20.1640.10 514 1025 1.5E-300 T 13-10-2018 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 SUPERFAMILY SSF82866 299 504 1.31E-36 T 13-10-2018 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 Pfam PF00873 AcrB/AcrD/AcrF family 6 1029 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 Gene3D G3DSA:3.30.70.1430 42 820 1.5E-300 T 13-10-2018 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 Gene3D G3DSA:1.20.1640.10 16 513 1.5E-300 T 13-10-2018 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 Gene3D G3DSA:3.30.2090.10 724 812 1.5E-300 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 SUPERFAMILY SSF82693 566 665 2.43E-7 T 13-10-2018 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 SUPERFAMILY SSF82714 723 807 6.15E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 Gene3D G3DSA:3.30.70.1320 136 333 1.5E-300 T 13-10-2018 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 SUPERFAMILY SSF82693 155 333 2.62E-20 T 13-10-2018 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 SUPERFAMILY SSF82866 807 1031 2.22E-55 T 13-10-2018 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 Gene3D G3DSA:3.30.2090.10 189 280 1.5E-300 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 SUPERFAMILY SSF82693 42 127 1.92E-21 T 13-10-2018 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.6E-29 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 5.6E-29 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 5.6E-29 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 5.6E-29 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 5.6E-29 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 5.6E-29 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_05785 1448c79d719838d2ed08974bba9e9ab0 1048 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 5.6E-29 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_03810 3b6d46f990c84b8216b56e28f0c50cb4 204 Gene3D G3DSA:1.10.1740.10 2 114 1.6E-26 T 13-10-2018 P40_03810 3b6d46f990c84b8216b56e28f0c50cb4 204 SUPERFAMILY SSF88946 5 99 2.35E-25 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_03810 3b6d46f990c84b8216b56e28f0c50cb4 204 Pfam PF04542 Sigma-70 region 2 26 92 3.5E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_03810 3b6d46f990c84b8216b56e28f0c50cb4 204 Pfam PF08281 Sigma-70, region 4 144 191 8.6E-11 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_03810 3b6d46f990c84b8216b56e28f0c50cb4 204 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 191 1.8E-23 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_03810 3b6d46f990c84b8216b56e28f0c50cb4 204 Gene3D G3DSA:1.10.10.10 124 197 8.6E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_03810 3b6d46f990c84b8216b56e28f0c50cb4 204 SUPERFAMILY SSF88659 128 194 4.3E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 SUPERFAMILY SSF51905 200 513 6.76E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 Gene3D G3DSA:3.40.30.80 1 199 1.7E-63 T 13-10-2018 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 516 5.4E-246 T 13-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 467 489 3.9E-39 T 13-10-2018 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 3.9E-39 T 13-10-2018 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 374 3.9E-39 T 13-10-2018 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 457 3.9E-39 T 13-10-2018 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 3.9E-39 T 13-10-2018 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PIRSF PIRSF000238 1 520 1.3E-267 T 13-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 Gene3D G3DSA:3.50.50.60 326 449 1.8E-114 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 Pfam PF13192 Thioredoxin domain 124 194 1.1E-8 T 13-10-2018 IPR012336 Thioredoxin-like fold P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 Gene3D G3DSA:3.50.50.60 212 507 1.8E-114 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 SUPERFAMILY SSF52833 1 101 7.04E-29 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 SUPERFAMILY SSF52833 103 196 7.68E-24 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 344 364 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 1.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 349 1.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 1.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 1.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 464 1.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 323 1.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 352 376 1.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 404 420 1.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 477 495 1.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_19930 0930b622f7a4fb10eb6bb30a1d0dfe8f 523 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 503 2.6E-47 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_03640 0f64a34ea778c9501de755a151873308 455 Pfam PF16360 GTP-binding GTPase Middle Region 121 199 2.2E-29 T 13-10-2018 IPR032305 GTP-binding protein, middle domain P40_03640 0f64a34ea778c9501de755a151873308 455 Pfam PF13167 GTP-binding GTPase N-terminal 32 119 4.7E-30 T 13-10-2018 IPR025121 GTPase HflX, N-terminal P40_03640 0f64a34ea778c9501de755a151873308 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.4E-7 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_03640 0f64a34ea778c9501de755a151873308 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 207 227 3.4E-7 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_03640 0f64a34ea778c9501de755a151873308 455 Pfam PF01926 50S ribosome-binding GTPase 207 325 4.6E-19 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_03640 0f64a34ea778c9501de755a151873308 455 Gene3D G3DSA:3.40.50.300 205 374 1.2E-33 T 13-10-2018 P40_03640 0f64a34ea778c9501de755a151873308 455 SUPERFAMILY SSF52540 205 372 5.4E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03640 0f64a34ea778c9501de755a151873308 455 Gene3D G3DSA:3.40.50.11060 27 145 2.5E-36 T 13-10-2018 P40_03640 0f64a34ea778c9501de755a151873308 455 Hamap MF_00900 GTPase HflX [hflX]. 34 396 48.587 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 P40_03640 0f64a34ea778c9501de755a151873308 455 PIRSF PIRSF006809 8 429 9.5E-147 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 P40_03640 0f64a34ea778c9501de755a151873308 455 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 17 367 2.1E-150 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 P40_18180 4a2021166a74565b119062809863e714 177 Pfam PF00347 Ribosomal protein L6 91 164 3.3E-21 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18180 4a2021166a74565b119062809863e714 177 Pfam PF00347 Ribosomal protein L6 12 82 9.1E-18 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18180 4a2021166a74565b119062809863e714 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 38.578 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 P40_18180 4a2021166a74565b119062809863e714 177 Gene3D G3DSA:3.90.930.12 83 177 2.1E-40 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18180 4a2021166a74565b119062809863e714 177 Gene3D G3DSA:3.90.930.12 1 82 8.9E-30 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18180 4a2021166a74565b119062809863e714 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.6E-33 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 P40_18180 4a2021166a74565b119062809863e714 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.6E-33 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 P40_18180 4a2021166a74565b119062809863e714 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.6E-33 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 P40_18180 4a2021166a74565b119062809863e714 177 SUPERFAMILY SSF56053 1 82 9.83E-25 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18180 4a2021166a74565b119062809863e714 177 PIRSF PIRSF002162 1 177 4.4E-42 T 13-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18180 4a2021166a74565b119062809863e714 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 13-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18180 4a2021166a74565b119062809863e714 177 SUPERFAMILY SSF56053 83 177 1.05E-37 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18180 4a2021166a74565b119062809863e714 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.3E-78 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 P40_01715 cfd05d93e14eb4b75dc21525498667a1 145 SUPERFAMILY SSF54106 94 144 2.35E-8 T 13-10-2018 P40_01715 cfd05d93e14eb4b75dc21525498667a1 145 Pfam PF01476 LysM domain 96 144 7.8E-13 T 13-10-2018 IPR018392 LysM domain P40_01715 cfd05d93e14eb4b75dc21525498667a1 145 Pfam PF04972 BON domain 18 79 1.5E-11 T 13-10-2018 IPR007055 BON domain P40_01715 cfd05d93e14eb4b75dc21525498667a1 145 SMART SM00257 95 144 2.0E-12 T 13-10-2018 IPR018392 LysM domain P40_01715 cfd05d93e14eb4b75dc21525498667a1 145 Gene3D G3DSA:3.10.350.10 95 143 2.8E-15 T 13-10-2018 IPR036779 LysM domain superfamily P40_11655 5023bc60c6e6284b93fde8597a123bca 135 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 54 119 2.5E-23 T 13-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal P40_11655 5023bc60c6e6284b93fde8597a123bca 135 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 17 52 2.1E-11 T 13-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal P40_11655 5023bc60c6e6284b93fde8597a123bca 135 SUPERFAMILY SSF50249 3 124 1.51E-36 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 Gene3D G3DSA:3.40.50.720 2 139 1.7E-47 T 13-10-2018 P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.6E-29 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.6E-29 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.6E-29 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.6E-29 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.6E-29 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 Gene3D G3DSA:3.30.70.1450 140 232 2.3E-24 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 Gene3D G3DSA:3.40.50.720 233 366 1.9E-34 T 13-10-2018 P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 SUPERFAMILY SSF116726 148 225 1.15E-11 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 SUPERFAMILY SSF51735 233 376 4.85E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 Pfam PF02080 TrkA-C domain 155 225 2.1E-13 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 Pfam PF02080 TrkA-C domain 390 451 4.2E-11 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 SUPERFAMILY SSF51735 1 152 1.65E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 Pfam PF02254 TrkA-N domain 235 350 2.8E-23 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 Pfam PF02254 TrkA-N domain 3 125 1.0E-26 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 Gene3D G3DSA:3.30.70.1450 367 458 4.4E-29 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 P40_00635 ac6c3af18e074c3fe7b3c56dd6eca9cd 458 SUPERFAMILY SSF116726 361 437 6.02E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 P40_20800 1e27f3586135c001f82da5cdb47a99f1 163 SUPERFAMILY SSF52833 3 158 2.42E-66 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_20800 1e27f3586135c001f82da5cdb47a99f1 163 Pfam PF00255 Glutathione peroxidase 3 110 3.2E-46 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 P40_20800 1e27f3586135c001f82da5cdb47a99f1 163 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 13-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 P40_20800 1e27f3586135c001f82da5cdb47a99f1 163 Gene3D G3DSA:3.40.30.10 1 163 6.3E-74 T 13-10-2018 P40_20800 1e27f3586135c001f82da5cdb47a99f1 163 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 13-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 P40_20800 1e27f3586135c001f82da5cdb47a99f1 163 PIRSF PIRSF000303 2 162 8.8E-69 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 P40_20800 1e27f3586135c001f82da5cdb47a99f1 163 PRINTS PR01011 Glutathione peroxidase family signature 56 72 1.2E-21 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 P40_20800 1e27f3586135c001f82da5cdb47a99f1 163 PRINTS PR01011 Glutathione peroxidase family signature 21 38 1.2E-21 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 P40_20800 1e27f3586135c001f82da5cdb47a99f1 163 PRINTS PR01011 Glutathione peroxidase family signature 122 131 1.2E-21 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 P40_16610 70cd7ca6d026533ef0125d36ea0bf4b2 313 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 300 3.0E-35 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_07445 ab1230d2b4fbb3cf7dec696a56c7c618 313 SUPERFAMILY SSF52540 4 231 6.04E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07445 ab1230d2b4fbb3cf7dec696a56c7c618 313 SMART SM00382 29 218 4.2E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_07445 ab1230d2b4fbb3cf7dec696a56c7c618 313 Pfam PF00005 ABC transporter 20 164 1.0E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_07445 ab1230d2b4fbb3cf7dec696a56c7c618 313 Gene3D G3DSA:3.40.50.300 2 238 4.8E-66 T 13-10-2018 P40_07445 ab1230d2b4fbb3cf7dec696a56c7c618 313 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_07110 5643acf863b67afaf33701fa154da93c 488 Pfam PF13180 PDZ domain 398 485 1.6E-9 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_07110 5643acf863b67afaf33701fa154da93c 488 Pfam PF13180 PDZ domain 287 377 4.3E-18 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_07110 5643acf863b67afaf33701fa154da93c 488 Pfam PF13365 Trypsin-like peptidase domain 114 247 8.6E-37 T 13-10-2018 P40_07110 5643acf863b67afaf33701fa154da93c 488 SUPERFAMILY SSF50494 53 278 9.47E-69 T 13-10-2018 IPR009003 Peptidase S1, PA clan P40_07110 5643acf863b67afaf33701fa154da93c 488 Gene3D G3DSA:2.30.42.10 402 487 1.3E-16 T 13-10-2018 P40_07110 5643acf863b67afaf33701fa154da93c 488 SUPERFAMILY SSF50156 244 368 2.23E-26 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 P40_07110 5643acf863b67afaf33701fa154da93c 488 Gene3D G3DSA:2.40.10.120 54 279 7.0E-85 T 13-10-2018 P40_07110 5643acf863b67afaf33701fa154da93c 488 SMART SM00228 286 368 3.5E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_07110 5643acf863b67afaf33701fa154da93c 488 SMART SM00228 398 477 1.8E-8 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_07110 5643acf863b67afaf33701fa154da93c 488 Gene3D G3DSA:2.30.42.10 281 387 8.7E-29 T 13-10-2018 P40_07110 5643acf863b67afaf33701fa154da93c 488 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 56 483 3.3E-158 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 P40_07110 5643acf863b67afaf33701fa154da93c 488 SUPERFAMILY SSF50156 419 485 1.45E-12 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 P40_07110 5643acf863b67afaf33701fa154da93c 488 PRINTS PR00834 HtrA/DegQ protease family signature 218 235 4.2E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_07110 5643acf863b67afaf33701fa154da93c 488 PRINTS PR00834 HtrA/DegQ protease family signature 184 208 4.2E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_07110 5643acf863b67afaf33701fa154da93c 488 PRINTS PR00834 HtrA/DegQ protease family signature 144 164 4.2E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_07110 5643acf863b67afaf33701fa154da93c 488 PRINTS PR00834 HtrA/DegQ protease family signature 240 257 4.2E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_07110 5643acf863b67afaf33701fa154da93c 488 PRINTS PR00834 HtrA/DegQ protease family signature 123 135 4.2E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_07110 5643acf863b67afaf33701fa154da93c 488 PRINTS PR00834 HtrA/DegQ protease family signature 326 338 4.2E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_04920 02ef007a6eeac2c68be9fd9ae71c72bd 230 SMART SM01236 72 169 3.1E-6 T 13-10-2018 P40_04920 02ef007a6eeac2c68be9fd9ae71c72bd 230 Gene3D G3DSA:1.20.910.10 2 216 1.1E-57 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 P40_04920 02ef007a6eeac2c68be9fd9ae71c72bd 230 Pfam PF14518 Iron-containing redox enzyme 37 204 1.6E-25 T 13-10-2018 P40_04920 02ef007a6eeac2c68be9fd9ae71c72bd 230 SUPERFAMILY SSF48613 2 212 3.62E-60 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 P40_02220 434dce01bd5d01957a8122145aaf2ea5 107 SUPERFAMILY SSF103481 6 105 1.1E-9 T 13-10-2018 P40_02220 434dce01bd5d01957a8122145aaf2ea5 107 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 105 23.985 T 13-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 P40_02220 434dce01bd5d01957a8122145aaf2ea5 107 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 3 106 2.6E-31 T 13-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 P40_10645 7e420cda844abac2dd3da6a39d0a35ac 377 Gene3D G3DSA:3.40.50.2300 1 134 4.9E-32 T 13-10-2018 P40_10645 7e420cda844abac2dd3da6a39d0a35ac 377 SUPERFAMILY SSF55785 131 258 3.49E-10 T 13-10-2018 IPR035965 PAS domain superfamily P40_10645 7e420cda844abac2dd3da6a39d0a35ac 377 Gene3D G3DSA:3.30.450.20 135 259 1.5E-12 T 13-10-2018 P40_10645 7e420cda844abac2dd3da6a39d0a35ac 377 SMART SM00091 143 209 5.9E-6 T 13-10-2018 IPR000014 PAS domain P40_10645 7e420cda844abac2dd3da6a39d0a35ac 377 SUPERFAMILY SSF141371 269 365 1.26E-6 T 13-10-2018 P40_10645 7e420cda844abac2dd3da6a39d0a35ac 377 Pfam PF00072 Response regulator receiver domain 6 118 1.4E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_10645 7e420cda844abac2dd3da6a39d0a35ac 377 SUPERFAMILY SSF52172 1 158 1.02E-35 T 13-10-2018 IPR011006 CheY-like superfamily P40_10645 7e420cda844abac2dd3da6a39d0a35ac 377 Pfam PF07238 PilZ domain 270 373 6.7E-11 T 13-10-2018 IPR009875 PilZ domain GO:0035438 P40_10645 7e420cda844abac2dd3da6a39d0a35ac 377 SMART SM00448 4 118 7.3E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_10645 7e420cda844abac2dd3da6a39d0a35ac 377 Pfam PF00989 PAS fold 145 259 1.4E-9 T 13-10-2018 IPR013767 PAS fold GO:0006355 P40_15105 503acee231e3a80e33b253b3ff99707a 342 SUPERFAMILY SSF46785 260 333 7.78E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_15105 503acee231e3a80e33b253b3ff99707a 342 SMART SM00382 54 181 1.4E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_15105 503acee231e3a80e33b253b3ff99707a 342 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 1.3E-142 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 P40_15105 503acee231e3a80e33b253b3ff99707a 342 SUPERFAMILY SSF52540 23 254 4.59E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_15105 503acee231e3a80e33b253b3ff99707a 342 Gene3D G3DSA:1.10.10.10 260 337 2.5E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_15105 503acee231e3a80e33b253b3ff99707a 342 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 330 3.0E-24 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 P40_15105 503acee231e3a80e33b253b3ff99707a 342 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 342 175.268 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 P40_15105 503acee231e3a80e33b253b3ff99707a 342 Gene3D G3DSA:3.40.50.300 21 184 3.0E-37 T 13-10-2018 P40_15105 503acee231e3a80e33b253b3ff99707a 342 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 11 238 8.0E-116 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 P40_15105 503acee231e3a80e33b253b3ff99707a 342 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 5.5E-33 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 P40_15105 503acee231e3a80e33b253b3ff99707a 342 Gene3D G3DSA:1.10.8.60 185 258 1.7E-28 T 13-10-2018 P40_02805 d80cd4f462f0186db5cb884137cdbc3f 408 Gene3D G3DSA:2.30.42.10 83 170 2.4E-100 T 13-10-2018 P40_02805 d80cd4f462f0186db5cb884137cdbc3f 408 SUPERFAMILY SSF50156 72 166 8.8E-21 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 P40_02805 d80cd4f462f0186db5cb884137cdbc3f 408 SMART SM00245 156 346 1.7E-75 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 P40_02805 d80cd4f462f0186db5cb884137cdbc3f 408 SUPERFAMILY SSF52096 20 349 7.95E-82 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_02805 d80cd4f462f0186db5cb884137cdbc3f 408 Gene3D G3DSA:3.30.750.44 29 321 2.4E-100 T 13-10-2018 P40_02805 d80cd4f462f0186db5cb884137cdbc3f 408 Pfam PF03572 Peptidase family S41 182 345 2.9E-57 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 P40_02805 d80cd4f462f0186db5cb884137cdbc3f 408 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 40 351 2.9E-105 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 P40_02805 d80cd4f462f0186db5cb884137cdbc3f 408 Gene3D G3DSA:3.90.226.10 171 343 2.4E-100 T 13-10-2018 P40_02805 d80cd4f462f0186db5cb884137cdbc3f 408 SMART SM00228 83 154 1.4E-16 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_02805 d80cd4f462f0186db5cb884137cdbc3f 408 Pfam PF13180 PDZ domain 83 161 1.5E-11 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_13385 2e5425dc0b17a27b19ad2d18a1149f3c 140 Gene3D G3DSA:3.10.129.10 8 140 1.1E-32 T 13-10-2018 P40_13385 2e5425dc0b17a27b19ad2d18a1149f3c 140 Pfam PF03061 Thioesterase superfamily 47 121 2.7E-14 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_13385 2e5425dc0b17a27b19ad2d18a1149f3c 140 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 17 135 1.2E-18 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 P40_13385 2e5425dc0b17a27b19ad2d18a1149f3c 140 SUPERFAMILY SSF54637 9 139 6.73E-30 T 13-10-2018 IPR029069 HotDog domain superfamily P40_21095 8025a55e946ac552d08dcc6bb0b3dfcb 305 Gene3D G3DSA:3.90.1200.10 109 302 1.3E-44 T 13-10-2018 P40_21095 8025a55e946ac552d08dcc6bb0b3dfcb 305 Gene3D G3DSA:3.30.200.20 1 106 3.7E-19 T 13-10-2018 P40_21095 8025a55e946ac552d08dcc6bb0b3dfcb 305 SUPERFAMILY SSF56112 5 272 2.92E-47 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_21095 8025a55e946ac552d08dcc6bb0b3dfcb 305 Pfam PF01636 Phosphotransferase enzyme family 27 246 1.8E-26 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase P40_21095 8025a55e946ac552d08dcc6bb0b3dfcb 305 Hamap MF_00301 Homoserine kinase [thrB]. 1 305 70.545 T 13-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 P40_21280 a5acd3621edcd19d014f9a5a4b5fdca6 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 157 3.4E-17 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_13165 328d7e9ae6b0f4a83de1ab4c5f65c460 336 SUPERFAMILY SSF52540 11 207 1.02E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_13165 328d7e9ae6b0f4a83de1ab4c5f65c460 336 Pfam PF13177 DNA polymerase III, delta subunit 15 167 1.2E-43 T 13-10-2018 P40_13165 328d7e9ae6b0f4a83de1ab4c5f65c460 336 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 215 327 3.5E-9 T 13-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_13165 328d7e9ae6b0f4a83de1ab4c5f65c460 336 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 19 204 6.0E-60 T 13-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_13165 328d7e9ae6b0f4a83de1ab4c5f65c460 336 Gene3D G3DSA:3.40.50.300 8 171 9.2E-53 T 13-10-2018 P40_21255 50ebe984f3db10b0b7b33e738cb6c272 237 SUPERFAMILY SSF109755 12 234 2.83E-72 T 13-10-2018 P40_21255 50ebe984f3db10b0b7b33e738cb6c272 237 Gene3D G3DSA:1.20.58.220 123 236 3.2E-34 T 13-10-2018 IPR038078 PhoU-like domain superfamily P40_21255 50ebe984f3db10b0b7b33e738cb6c272 237 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 12 223 1.3E-72 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 P40_21255 50ebe984f3db10b0b7b33e738cb6c272 237 Gene3D G3DSA:1.20.58.220 1 122 7.3E-43 T 13-10-2018 IPR038078 PhoU-like domain superfamily P40_21255 50ebe984f3db10b0b7b33e738cb6c272 237 Pfam PF01895 PhoU domain 130 214 6.1E-17 T 13-10-2018 IPR026022 PhoU domain P40_21255 50ebe984f3db10b0b7b33e738cb6c272 237 Pfam PF01895 PhoU domain 25 111 8.9E-22 T 13-10-2018 IPR026022 PhoU domain P40_21255 50ebe984f3db10b0b7b33e738cb6c272 237 PIRSF PIRSF003107 7 228 2.3E-72 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 P40_15160 60f79c5db6d01148f986572e1cfe3250 127 SUPERFAMILY SSF54637 2 122 1.34E-24 T 13-10-2018 IPR029069 HotDog domain superfamily P40_15160 60f79c5db6d01148f986572e1cfe3250 127 Pfam PF03061 Thioesterase superfamily 37 110 8.3E-12 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_15160 60f79c5db6d01148f986572e1cfe3250 127 Gene3D G3DSA:3.10.129.10 1 126 5.1E-44 T 13-10-2018 P40_15160 60f79c5db6d01148f986572e1cfe3250 127 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 15 119 5.1E-10 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 P40_16445 724bcd9ec9b5de2f883db56f813a7532 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 347 5.7E-105 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_16445 724bcd9ec9b5de2f883db56f813a7532 355 Gene3D G3DSA:3.40.50.2000 159 336 5.3E-114 T 13-10-2018 P40_16445 724bcd9ec9b5de2f883db56f813a7532 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 352 36.676 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_16445 724bcd9ec9b5de2f883db56f813a7532 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 182 341 1.7E-36 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 P40_16445 724bcd9ec9b5de2f883db56f813a7532 355 Gene3D G3DSA:3.40.50.2000 6 342 5.3E-114 T 13-10-2018 P40_16445 724bcd9ec9b5de2f883db56f813a7532 355 SUPERFAMILY SSF53756 4 352 2.05E-121 T 13-10-2018 P40_16445 724bcd9ec9b5de2f883db56f813a7532 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 142 1.5E-41 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_18480 60c1e3c1b1a7293eb81d2385860a26ea 110 SUPERFAMILY SSF50022 2 103 7.73E-25 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_18480 60c1e3c1b1a7293eb81d2385860a26ea 110 Pfam PF00355 Rieske [2Fe-2S] domain 2 86 1.1E-14 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 P40_18480 60c1e3c1b1a7293eb81d2385860a26ea 110 Gene3D G3DSA:2.102.10.10 1 108 2.9E-19 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_06920 895d151e2274007e8f83c845571249a4 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 442 4.9E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_06920 895d151e2274007e8f83c845571249a4 448 Gene3D G3DSA:3.30.450.170 27 149 2.9E-34 T 13-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily P40_06920 895d151e2274007e8f83c845571249a4 448 SUPERFAMILY SSF47384 216 288 1.37E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_06920 895d151e2274007e8f83c845571249a4 448 Pfam PF00672 HAMP domain 177 226 8.5E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_06920 895d151e2274007e8f83c845571249a4 448 SUPERFAMILY SSF55874 280 442 2.1E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_06920 895d151e2274007e8f83c845571249a4 448 SMART SM00304 177 231 1.3E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_06920 895d151e2274007e8f83c845571249a4 448 SUPERFAMILY SSF158472 177 227 4.71E-5 T 13-10-2018 P40_06920 895d151e2274007e8f83c845571249a4 448 SMART SM00387 336 446 6.9E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_06920 895d151e2274007e8f83c845571249a4 448 SMART SM00388 232 291 5.6E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_06920 895d151e2274007e8f83c845571249a4 448 Gene3D G3DSA:3.30.565.10 301 447 5.4E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_06920 895d151e2274007e8f83c845571249a4 448 Gene3D G3DSA:1.10.287.130 181 292 1.1E-20 T 13-10-2018 P40_06920 895d151e2274007e8f83c845571249a4 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 290 2.5E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_06920 895d151e2274007e8f83c845571249a4 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 3.1E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_06920 895d151e2274007e8f83c845571249a4 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 3.1E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_06920 895d151e2274007e8f83c845571249a4 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 401 3.1E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_06920 895d151e2274007e8f83c845571249a4 448 Pfam PF16750 Sensor domain of 2-component histidine kinase 40 148 1.7E-35 T 13-10-2018 IPR031930 2-component histidine kinase, sensor domain P40_01220 c08a714d6262e70767f7f5ae28910d62 449 SUPERFAMILY SSF53187 31 436 6.58E-69 T 13-10-2018 P40_01220 c08a714d6262e70767f7f5ae28910d62 449 Gene3D G3DSA:3.40.630.10 47 428 4.0E-112 T 13-10-2018 P40_01220 c08a714d6262e70767f7f5ae28910d62 449 SUPERFAMILY SSF55031 222 325 2.09E-25 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain P40_01220 c08a714d6262e70767f7f5ae28910d62 449 Gene3D G3DSA:3.30.70.360 221 339 4.0E-112 T 13-10-2018 P40_01220 c08a714d6262e70767f7f5ae28910d62 449 Pfam PF07687 Peptidase dimerisation domain 222 316 1.5E-5 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain P40_01220 c08a714d6262e70767f7f5ae28910d62 449 PIRSF PIRSF005962 29 447 4.4E-99 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 P40_01220 c08a714d6262e70767f7f5ae28910d62 449 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 47 392 1.0E-82 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 P40_01220 c08a714d6262e70767f7f5ae28910d62 449 Pfam PF01546 Peptidase family M20/M25/M40 101 396 1.2E-22 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 P40_05090 6478f44a387e73c083c88cc8f8db05a5 316 SUPERFAMILY SSF50685 105 203 2.51E-9 T 13-10-2018 IPR036908 RlpA-like domain superfamily P40_05090 6478f44a387e73c083c88cc8f8db05a5 316 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 116 210 1.4E-44 T 13-10-2018 IPR012997 Rare lipoprotein A P40_05090 6478f44a387e73c083c88cc8f8db05a5 316 Gene3D G3DSA:2.40.40.10 113 207 7.2E-36 T 13-10-2018 IPR036908 RlpA-like domain superfamily P40_05090 6478f44a387e73c083c88cc8f8db05a5 316 Pfam PF05036 Sporulation related domain 243 313 4.5E-8 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 P40_05090 6478f44a387e73c083c88cc8f8db05a5 316 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 7 206 24.469 T 13-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 P40_05090 6478f44a387e73c083c88cc8f8db05a5 316 SUPERFAMILY SSF110997 242 312 7.19E-11 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 P40_05090 6478f44a387e73c083c88cc8f8db05a5 316 Gene3D G3DSA:3.30.70.1070 237 315 4.1E-5 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 P40_05090 6478f44a387e73c083c88cc8f8db05a5 316 Pfam PF03330 Lytic transglycolase 114 202 3.4E-24 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain P40_04290 75944238ffb1be7bb005d7484435c68b 313 Gene3D G3DSA:3.30.1180.10 172 310 2.5E-12 T 13-10-2018 P40_04290 75944238ffb1be7bb005d7484435c68b 313 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 307 9.8E-49 T 13-10-2018 IPR003797 DegV P40_04290 75944238ffb1be7bb005d7484435c68b 313 Gene3D G3DSA:3.40.50.10170 1 166 3.4E-18 T 13-10-2018 P40_04290 75944238ffb1be7bb005d7484435c68b 313 SUPERFAMILY SSF82549 1 308 3.66E-44 T 13-10-2018 P40_04290 75944238ffb1be7bb005d7484435c68b 313 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 305 6.1E-30 T 13-10-2018 IPR003797 DegV P40_18085 734911178cbda42f7dd4345974f892ad 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 1.3E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_18085 734911178cbda42f7dd4345974f892ad 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 1.3E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_18085 734911178cbda42f7dd4345974f892ad 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 1.3E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_18085 734911178cbda42f7dd4345974f892ad 215 SMART SM00421 154 211 2.9E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_18085 734911178cbda42f7dd4345974f892ad 215 SUPERFAMILY SSF46894 143 213 1.73E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_18085 734911178cbda42f7dd4345974f892ad 215 Gene3D G3DSA:3.40.50.2300 7 147 5.9E-28 T 13-10-2018 P40_18085 734911178cbda42f7dd4345974f892ad 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 4.6E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_18085 734911178cbda42f7dd4345974f892ad 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_18085 734911178cbda42f7dd4345974f892ad 215 Gene3D G3DSA:1.10.10.10 148 215 6.5E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_15645 02613cef771c81a9b608c0bc5c15a80b 259 Gene3D G3DSA:1.10.3720.10 50 248 3.5E-25 T 13-10-2018 IPR035906 MetI-like superfamily P40_15645 02613cef771c81a9b608c0bc5c15a80b 259 SUPERFAMILY SSF161098 54 236 3.4E-29 T 13-10-2018 IPR035906 MetI-like superfamily P40_15645 02613cef771c81a9b608c0bc5c15a80b 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 248 3.4E-25 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_06740 b8e1bf76c454a8b57c71ed4529273b4f 721 ProSitePatterns PS00626 Regulator of chromosome condensation (RCC1) signature 2. 12 22 - T 13-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 P40_06740 b8e1bf76c454a8b57c71ed4529273b4f 721 Gene3D G3DSA:3.90.650.10 534 718 5.0E-48 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P40_06740 b8e1bf76c454a8b57c71ed4529273b4f 721 Gene3D G3DSA:3.50.50.100 5 371 5.0E-74 T 13-10-2018 P40_06740 b8e1bf76c454a8b57c71ed4529273b4f 721 TIGRFAM TIGR03169 Nterm_to_SelD: pyridine nucleotide-disulfide oxidoreductase family protein 8 364 3.1E-130 T 13-10-2018 IPR017584 Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal P40_06740 b8e1bf76c454a8b57c71ed4529273b4f 721 SUPERFAMILY SSF55326 379 526 1.24E-32 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P40_06740 b8e1bf76c454a8b57c71ed4529273b4f 721 SUPERFAMILY SSF56042 532 710 9.57E-42 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P40_06740 b8e1bf76c454a8b57c71ed4529273b4f 721 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 291 2.9E-29 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_06740 b8e1bf76c454a8b57c71ed4529273b4f 721 Pfam PF02769 AIR synthase related protein, C-terminal domain 538 713 1.7E-23 T 13-10-2018 IPR010918 PurM-like, C-terminal domain P40_06740 b8e1bf76c454a8b57c71ed4529273b4f 721 SUPERFAMILY SSF51905 139 307 5.89E-24 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_06740 b8e1bf76c454a8b57c71ed4529273b4f 721 Pfam PF00586 AIR synthase related protein, N-terminal domain 418 525 5.4E-15 T 13-10-2018 IPR016188 PurM-like, N-terminal domain P40_06740 b8e1bf76c454a8b57c71ed4529273b4f 721 Gene3D G3DSA:3.30.1330.10 374 530 4.8E-42 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P40_06740 b8e1bf76c454a8b57c71ed4529273b4f 721 TIGRFAM TIGR00476 selD: selenide, water dikinase 380 684 7.8E-85 T 13-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 P40_06740 b8e1bf76c454a8b57c71ed4529273b4f 721 SUPERFAMILY SSF51905 3 193 2.52E-24 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_17710 e1aab25d0855add35526bc031182b8ab 491 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 489 36.286 T 13-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 P40_17710 e1aab25d0855add35526bc031182b8ab 491 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 339 346 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 P40_17710 e1aab25d0855add35526bc031182b8ab 491 SUPERFAMILY SSF52949 1 176 1.06E-31 T 13-10-2018 P40_17710 e1aab25d0855add35526bc031182b8ab 491 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 29 143 1.5E-22 T 13-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 P40_17710 e1aab25d0855add35526bc031182b8ab 491 Gene3D G3DSA:3.40.630.10 172 489 3.0E-136 T 13-10-2018 P40_17710 e1aab25d0855add35526bc031182b8ab 491 PRINTS PR00481 Cytosol aminopeptidase signature 335 355 4.9E-53 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 P40_17710 e1aab25d0855add35526bc031182b8ab 491 PRINTS PR00481 Cytosol aminopeptidase signature 276 297 4.9E-53 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 P40_17710 e1aab25d0855add35526bc031182b8ab 491 PRINTS PR00481 Cytosol aminopeptidase signature 254 271 4.9E-53 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 P40_17710 e1aab25d0855add35526bc031182b8ab 491 PRINTS PR00481 Cytosol aminopeptidase signature 313 334 4.9E-53 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 P40_17710 e1aab25d0855add35526bc031182b8ab 491 PRINTS PR00481 Cytosol aminopeptidase signature 364 379 4.9E-53 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 P40_17710 e1aab25d0855add35526bc031182b8ab 491 Gene3D G3DSA:3.40.220.10 1 155 4.1E-38 T 13-10-2018 P40_17710 e1aab25d0855add35526bc031182b8ab 491 SUPERFAMILY SSF53187 173 487 6.28E-121 T 13-10-2018 P40_17710 e1aab25d0855add35526bc031182b8ab 491 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 179 480 3.0E-125 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 P40_13970 55e5a05d54eca1bd114fdef4513002f7 632 Gene3D G3DSA:1.20.272.10 242 355 8.5E-30 T 13-10-2018 P40_13970 55e5a05d54eca1bd114fdef4513002f7 632 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 352 4.5E-23 T 13-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 P40_13970 55e5a05d54eca1bd114fdef4513002f7 632 SUPERFAMILY SSF48019 243 357 3.23E-22 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 P40_13970 55e5a05d54eca1bd114fdef4513002f7 632 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 511 628 3.4E-19 T 13-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_13970 55e5a05d54eca1bd114fdef4513002f7 632 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 5.1E-5 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 P40_13970 55e5a05d54eca1bd114fdef4513002f7 632 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 5.1E-5 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 P40_13970 55e5a05d54eca1bd114fdef4513002f7 632 Gene3D G3DSA:3.40.50.300 13 177 2.2E-100 T 13-10-2018 P40_13970 55e5a05d54eca1bd114fdef4513002f7 632 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 349 1.6E-125 T 13-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 P40_13970 55e5a05d54eca1bd114fdef4513002f7 632 SMART SM00382 37 178 2.1E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_13970 55e5a05d54eca1bd114fdef4513002f7 632 SUPERFAMILY SSF52540 30 222 2.65E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_13970 55e5a05d54eca1bd114fdef4513002f7 632 Gene3D G3DSA:1.10.8.60 8 238 2.2E-100 T 13-10-2018 P40_13970 55e5a05d54eca1bd114fdef4513002f7 632 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.3E-40 T 13-10-2018 P40_13970 55e5a05d54eca1bd114fdef4513002f7 632 Gene3D G3DSA:3.30.300.150 501 613 1.3E-13 T 13-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_20870 ef0a4f9bbb6c43ccecff56c9eb5b5e63 95 Gene3D G3DSA:1.10.760.10 17 95 3.4E-31 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_20870 ef0a4f9bbb6c43ccecff56c9eb5b5e63 95 SUPERFAMILY SSF46626 23 94 1.21E-17 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_20870 ef0a4f9bbb6c43ccecff56c9eb5b5e63 95 PRINTS PR00607 Class IE cytochrome C signature 40 50 1.6E-13 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 P40_20870 ef0a4f9bbb6c43ccecff56c9eb5b5e63 95 PRINTS PR00607 Class IE cytochrome C signature 68 80 1.6E-13 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 P40_20870 ef0a4f9bbb6c43ccecff56c9eb5b5e63 95 PRINTS PR00607 Class IE cytochrome C signature 29 40 1.6E-13 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 P40_20870 ef0a4f9bbb6c43ccecff56c9eb5b5e63 95 PRINTS PR00607 Class IE cytochrome C signature 83 94 1.6E-13 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 P40_20870 ef0a4f9bbb6c43ccecff56c9eb5b5e63 95 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 18 93 1.4E-17 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_10865 6982fe3eb52760a818fdd395ae95139e 235 Gene3D G3DSA:3.30.2350.10 20 234 5.0E-65 T 13-10-2018 P40_10865 6982fe3eb52760a818fdd395ae95139e 235 Pfam PF00849 RNA pseudouridylate synthase 37 185 2.6E-28 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_10865 6982fe3eb52760a818fdd395ae95139e 235 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 75 89 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_10865 6982fe3eb52760a818fdd395ae95139e 235 SUPERFAMILY SSF55120 25 234 9.76E-61 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_18360 6c3a7376b3327966ee7275406e50b629 244 Gene3D G3DSA:3.30.420.40 3 237 1.5E-56 T 13-10-2018 P40_18360 6c3a7376b3327966ee7275406e50b629 244 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 244 17.705 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 P40_18360 6c3a7376b3327966ee7275406e50b629 244 SUPERFAMILY SSF53067 1 113 2.46E-21 T 13-10-2018 P40_18360 6c3a7376b3327966ee7275406e50b629 244 Pfam PF03309 Type III pantothenate kinase 3 194 2.1E-41 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 P40_18360 6c3a7376b3327966ee7275406e50b629 244 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 240 9.2E-29 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 P40_18360 6c3a7376b3327966ee7275406e50b629 244 SUPERFAMILY SSF53067 116 240 1.29E-25 T 13-10-2018 P40_18360 6c3a7376b3327966ee7275406e50b629 244 Gene3D G3DSA:3.30.420.490 116 232 1.5E-56 T 13-10-2018 P40_02465 cb3c17b586b45ac2c0ad8bc4d0cd8662 495 Pfam PF00171 Aldehyde dehydrogenase family 34 491 9.5E-162 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_02465 cb3c17b586b45ac2c0ad8bc4d0cd8662 495 SUPERFAMILY SSF53720 12 494 2.36E-158 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_02465 cb3c17b586b45ac2c0ad8bc4d0cd8662 495 Gene3D G3DSA:3.40.309.10 271 460 7.9E-174 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_02465 cb3c17b586b45ac2c0ad8bc4d0cd8662 495 Gene3D G3DSA:3.40.605.10 34 489 7.9E-174 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_02465 cb3c17b586b45ac2c0ad8bc4d0cd8662 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 P40_02465 cb3c17b586b45ac2c0ad8bc4d0cd8662 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 P40_00190 8fc4a35551e9917d60c28258a20e7805 538 Gene3D G3DSA:3.50.50.60 448 536 2.2E-17 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_00190 8fc4a35551e9917d60c28258a20e7805 538 Pfam PF00732 GMC oxidoreductase 41 304 4.5E-52 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_00190 8fc4a35551e9917d60c28258a20e7805 538 SUPERFAMILY SSF51905 31 535 9.87E-60 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_00190 8fc4a35551e9917d60c28258a20e7805 538 PIRSF PIRSF000137 21 186 3.5E-14 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_00190 8fc4a35551e9917d60c28258a20e7805 538 PIRSF PIRSF000137 420 538 1.8E-11 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_00190 8fc4a35551e9917d60c28258a20e7805 538 PIRSF PIRSF000137 210 293 5.9E-6 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_00190 8fc4a35551e9917d60c28258a20e7805 538 Gene3D G3DSA:3.30.410.40 167 201 1.1E-27 T 13-10-2018 P40_00190 8fc4a35551e9917d60c28258a20e7805 538 Gene3D G3DSA:3.50.50.60 40 287 1.1E-27 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_00190 8fc4a35551e9917d60c28258a20e7805 538 Gene3D G3DSA:4.10.450.10 72 213 1.1E-27 T 13-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 P40_00190 8fc4a35551e9917d60c28258a20e7805 538 Gene3D G3DSA:1.10.1220.110 124 166 1.1E-27 T 13-10-2018 P40_00190 8fc4a35551e9917d60c28258a20e7805 538 Pfam PF05199 GMC oxidoreductase 415 527 3.3E-19 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 P40_05515 f8de9d2dba106ce4699c9fc86777cb94 599 SUPERFAMILY SSF51905 330 508 5.12E-9 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_05515 f8de9d2dba106ce4699c9fc86777cb94 599 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 168 395 1.5E-20 T 13-10-2018 P40_05515 f8de9d2dba106ce4699c9fc86777cb94 599 SUPERFAMILY SSF51905 167 367 1.6E-39 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_05515 f8de9d2dba106ce4699c9fc86777cb94 599 SUPERFAMILY SSF54427 1 112 3.51E-6 T 13-10-2018 IPR032710 NTF2-like domain superfamily P40_05515 f8de9d2dba106ce4699c9fc86777cb94 599 Gene3D G3DSA:3.50.50.60 158 424 7.4E-61 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_05515 f8de9d2dba106ce4699c9fc86777cb94 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 166 188 4.9E-6 T 13-10-2018 P40_05515 f8de9d2dba106ce4699c9fc86777cb94 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 290 299 4.9E-6 T 13-10-2018 P40_05515 f8de9d2dba106ce4699c9fc86777cb94 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 331 356 4.9E-6 T 13-10-2018 P40_09795 9e25dca062d8921b9d500f0dd4c726f5 386 SUPERFAMILY SSF47203 231 386 4.03E-23 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_09795 9e25dca062d8921b9d500f0dd4c726f5 386 Gene3D G3DSA:2.40.110.10 125 234 1.5E-38 T 13-10-2018 P40_09795 9e25dca062d8921b9d500f0dd4c726f5 386 Gene3D G3DSA:1.10.540.10 1 120 9.1E-30 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_09795 9e25dca062d8921b9d500f0dd4c726f5 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 1.7E-22 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_09795 9e25dca062d8921b9d500f0dd4c726f5 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 383 4.6E-19 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_09795 9e25dca062d8921b9d500f0dd4c726f5 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 121 1.7E-23 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_09795 9e25dca062d8921b9d500f0dd4c726f5 386 Gene3D G3DSA:1.20.140.10 235 386 1.8E-31 T 13-10-2018 P40_09795 9e25dca062d8921b9d500f0dd4c726f5 386 SUPERFAMILY SSF56645 2 244 1.22E-79 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_17060 9567eb421ff1c65b5d30c4c5b3d1870a 573 SMART SM00028 493 526 0.2 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_17060 9567eb421ff1c65b5d30c4c5b3d1870a 573 SMART SM00028 458 492 50.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_17060 9567eb421ff1c65b5d30c4c5b3d1870a 573 SMART SM00028 221 254 55.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_17060 9567eb421ff1c65b5d30c4c5b3d1870a 573 SMART SM00028 424 457 0.025 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_17060 9567eb421ff1c65b5d30c4c5b3d1870a 573 SMART SM00028 187 220 0.13 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_17060 9567eb421ff1c65b5d30c4c5b3d1870a 573 SUPERFAMILY SSF48452 184 348 2.44E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_17060 9567eb421ff1c65b5d30c4c5b3d1870a 573 SUPERFAMILY SSF48452 93 151 5.15E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_17060 9567eb421ff1c65b5d30c4c5b3d1870a 573 Gene3D G3DSA:1.25.40.10 358 571 3.8E-36 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_17060 9567eb421ff1c65b5d30c4c5b3d1870a 573 Pfam PF13429 Tetratricopeptide repeat 388 553 1.1E-9 T 13-10-2018 P40_17060 9567eb421ff1c65b5d30c4c5b3d1870a 573 Gene3D G3DSA:1.25.40.10 56 351 3.5E-26 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_17060 9567eb421ff1c65b5d30c4c5b3d1870a 573 SUPERFAMILY SSF48452 391 559 3.37E-31 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_17060 9567eb421ff1c65b5d30c4c5b3d1870a 573 Pfam PF14559 Tetratricopeptide repeat 199 259 1.6E-6 T 13-10-2018 P40_16395 0d41311fae2e6de4ad94c1a1f58108fd 409 Gene3D G3DSA:3.10.20.340 280 409 9.5E-43 T 13-10-2018 P40_16395 0d41311fae2e6de4ad94c1a1f58108fd 409 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 409 145.627 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 P40_16395 0d41311fae2e6de4ad94c1a1f58108fd 409 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 17 409 7.5E-121 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 P40_16395 0d41311fae2e6de4ad94c1a1f58108fd 409 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 27 409 2.0E-123 T 13-10-2018 P40_16395 0d41311fae2e6de4ad94c1a1f58108fd 409 SUPERFAMILY SSF56266 17 406 4.84E-133 T 13-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 P40_16395 0d41311fae2e6de4ad94c1a1f58108fd 409 Pfam PF01960 ArgJ family 22 409 6.6E-139 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 P40_16395 0d41311fae2e6de4ad94c1a1f58108fd 409 Gene3D G3DSA:3.60.70.12 10 279 1.5E-86 T 13-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 P40_14500 8cb6f653950114f69426cccc9938807c 109 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.5E-18 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 P40_14500 8cb6f653950114f69426cccc9938807c 109 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.5E-18 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 P40_14500 8cb6f653950114f69426cccc9938807c 109 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.5E-18 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 P40_14500 8cb6f653950114f69426cccc9938807c 109 SUPERFAMILY SSF54862 3 88 6.88E-24 T 13-10-2018 P40_14500 8cb6f653950114f69426cccc9938807c 109 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P40_14500 8cb6f653950114f69426cccc9938807c 109 Pfam PF00037 4Fe-4S binding domain 34 55 3.9E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain P40_14500 8cb6f653950114f69426cccc9938807c 109 Pfam PF11953 Domain of unknown function (DUF3470) 66 106 4.9E-20 T 13-10-2018 IPR022569 Ferredoxin, C-terminal P40_14500 8cb6f653950114f69426cccc9938807c 109 Gene3D G3DSA:3.30.70.20 2 105 2.1E-33 T 13-10-2018 P40_00030 ca20d82aca4dfce86e6dbd2af3ef7df5 253 Pfam PF01553 Acyltransferase 71 195 5.0E-17 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_00030 ca20d82aca4dfce86e6dbd2af3ef7df5 253 SMART SM00563 84 198 1.6E-26 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_00030 ca20d82aca4dfce86e6dbd2af3ef7df5 253 SUPERFAMILY SSF69593 20 244 6.41E-40 T 13-10-2018 P40_02285 bdfa9a249dff853a51f0820ad6117370 256 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 146 232 2.7E-26 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain P40_02285 bdfa9a249dff853a51f0820ad6117370 256 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 135 3.6E-33 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 P40_02285 bdfa9a249dff853a51f0820ad6117370 256 Gene3D G3DSA:3.10.50.40 125 245 5.1E-39 T 13-10-2018 P40_02285 bdfa9a249dff853a51f0820ad6117370 256 SUPERFAMILY SSF54534 32 234 2.55E-56 T 13-10-2018 P40_02285 bdfa9a249dff853a51f0820ad6117370 256 Gene3D G3DSA:1.10.287.460 18 124 8.3E-29 T 13-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 P40_19605 a61c1c84fb44eacbdf30153275b51037 336 Pfam PF00490 Delta-aminolevulinic acid dehydratase 11 330 2.5E-139 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P40_19605 a61c1c84fb44eacbdf30153275b51037 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 306 325 9.5E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P40_19605 a61c1c84fb44eacbdf30153275b51037 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 251 267 9.5E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P40_19605 a61c1c84fb44eacbdf30153275b51037 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 159 178 9.5E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P40_19605 a61c1c84fb44eacbdf30153275b51037 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 276 291 9.5E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P40_19605 a61c1c84fb44eacbdf30153275b51037 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 197 216 9.5E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P40_19605 a61c1c84fb44eacbdf30153275b51037 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 128 142 9.5E-56 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P40_19605 a61c1c84fb44eacbdf30153275b51037 336 SUPERFAMILY SSF51569 6 334 3.08E-142 T 13-10-2018 P40_19605 a61c1c84fb44eacbdf30153275b51037 336 PIRSF PIRSF001415 2 335 3.5E-148 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P40_19605 a61c1c84fb44eacbdf30153275b51037 336 SMART SM01004 8 332 2.0E-235 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P40_19605 a61c1c84fb44eacbdf30153275b51037 336 Gene3D G3DSA:3.20.20.70 3 336 1.2E-145 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_19605 a61c1c84fb44eacbdf30153275b51037 336 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 251 263 - T 13-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P40_00015 f537e9f2822c7215743bb94d0cc560fb 367 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 2 360 7.1E-84 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 P40_00015 f537e9f2822c7215743bb94d0cc560fb 367 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 P40_00015 f537e9f2822c7215743bb94d0cc560fb 367 SUPERFAMILY SSF52540 1 361 4.11E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_00015 f537e9f2822c7215743bb94d0cc560fb 367 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 367 79.41 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 P40_00015 f537e9f2822c7215743bb94d0cc560fb 367 Gene3D G3DSA:1.20.1050.90 121 298 1.0E-75 T 13-10-2018 P40_00015 f537e9f2822c7215743bb94d0cc560fb 367 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 341 1.8E-24 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal P40_00015 f537e9f2822c7215743bb94d0cc560fb 367 Gene3D G3DSA:3.40.50.300 5 333 1.0E-75 T 13-10-2018 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 Gene3D G3DSA:1.20.200.10 114 452 4.4E-151 T 13-10-2018 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 PRINTS PR00145 Argininosuccinate lyase family signature 282 298 3.9E-67 T 13-10-2018 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 PRINTS PR00145 Argininosuccinate lyase family signature 200 216 3.9E-67 T 13-10-2018 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 PRINTS PR00145 Argininosuccinate lyase family signature 149 169 3.9E-67 T 13-10-2018 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 PRINTS PR00145 Argininosuccinate lyase family signature 238 262 3.9E-67 T 13-10-2018 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 PRINTS PR00145 Argininosuccinate lyase family signature 108 130 3.9E-67 T 13-10-2018 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 PRINTS PR00145 Argininosuccinate lyase family signature 317 336 3.9E-67 T 13-10-2018 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 Gene3D G3DSA:1.10.40.30 369 439 4.4E-151 T 13-10-2018 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 PRINTS PR00149 Fumarate lyase superfamily signature 154 172 1.0E-29 T 13-10-2018 IPR000362 Fumarate lyase family P40_19470 c0d1a9648939800353b48caa57de0c4c 464 PRINTS PR00149 Fumarate lyase superfamily signature 238 265 1.0E-29 T 13-10-2018 IPR000362 Fumarate lyase family P40_19470 c0d1a9648939800353b48caa57de0c4c 464 PRINTS PR00149 Fumarate lyase superfamily signature 109 127 1.0E-29 T 13-10-2018 IPR000362 Fumarate lyase family P40_19470 c0d1a9648939800353b48caa57de0c4c 464 PRINTS PR00149 Fumarate lyase superfamily signature 282 298 1.0E-29 T 13-10-2018 IPR000362 Fumarate lyase family P40_19470 c0d1a9648939800353b48caa57de0c4c 464 Gene3D G3DSA:1.10.275.50 6 113 2.0E-42 T 13-10-2018 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 Pfam PF14698 Argininosuccinate lyase C-terminal 370 437 7.5E-25 T 13-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 ProSitePatterns PS00163 Fumarate lyases signature. 282 291 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 Hamap MF_00006 Argininosuccinate lyase [argH]. 9 460 44.524 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 SUPERFAMILY SSF48557 10 462 4.24E-159 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 TIGRFAM TIGR00838 argH: argininosuccinate lyase 10 462 3.1E-195 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 P40_19470 c0d1a9648939800353b48caa57de0c4c 464 Pfam PF00206 Lyase 13 307 1.0E-82 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal P40_10450 ff51a62ea157e2dbbcf9a0ab5f050f7c 96 SUPERFAMILY SSF54909 1 95 2.03E-22 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_10450 ff51a62ea157e2dbbcf9a0ab5f050f7c 96 Gene3D G3DSA:3.30.70.100 1 96 1.5E-22 T 13-10-2018 P40_10450 ff51a62ea157e2dbbcf9a0ab5f050f7c 96 Pfam PF07045 Domain of unknown function (DUF1330) 2 95 2.1E-23 T 13-10-2018 IPR010753 Domain of unknown function DUF1330 P40_00945 3bb574c04b9503ed12e3a72585fbef87 77 Gene3D G3DSA:3.30.2310.20 1 75 4.7E-7 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily P40_00945 3bb574c04b9503ed12e3a72585fbef87 77 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 75 6.5E-11 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family P40_03370 7e416285c50c1493414b8df8923491f8 1061 Gene3D G3DSA:3.30.2090.10 727 815 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_03370 7e416285c50c1493414b8df8923491f8 1061 Gene3D G3DSA:3.30.70.1430 576 674 0.0 T 13-10-2018 P40_03370 7e416285c50c1493414b8df8923491f8 1061 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 3.8E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_03370 7e416285c50c1493414b8df8923491f8 1061 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 3.8E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_03370 7e416285c50c1493414b8df8923491f8 1061 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_03370 7e416285c50c1493414b8df8923491f8 1061 PRINTS PR00702 Acriflavin resistance protein family signature 630 644 3.8E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_03370 7e416285c50c1493414b8df8923491f8 1061 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 3.8E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_03370 7e416285c50c1493414b8df8923491f8 1061 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 3.8E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_03370 7e416285c50c1493414b8df8923491f8 1061 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_03370 7e416285c50c1493414b8df8923491f8 1061 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 3.8E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_03370 7e416285c50c1493414b8df8923491f8 1061 PRINTS PR00702 Acriflavin resistance protein family signature 561 578 3.8E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_03370 7e416285c50c1493414b8df8923491f8 1061 Gene3D G3DSA:3.30.70.1320 135 334 0.0 T 13-10-2018 P40_03370 7e416285c50c1493414b8df8923491f8 1061 Gene3D G3DSA:3.30.70.1440 675 873 0.0 T 13-10-2018 P40_03370 7e416285c50c1493414b8df8923491f8 1061 SUPERFAMILY SSF82693 41 134 1.1E-25 T 13-10-2018 P40_03370 7e416285c50c1493414b8df8923491f8 1061 SUPERFAMILY SSF82866 298 499 3.27E-51 T 13-10-2018 P40_03370 7e416285c50c1493414b8df8923491f8 1061 Gene3D G3DSA:1.20.1640.10 522 1030 0.0 T 13-10-2018 P40_03370 7e416285c50c1493414b8df8923491f8 1061 Gene3D G3DSA:1.20.1640.10 10 521 0.0 T 13-10-2018 P40_03370 7e416285c50c1493414b8df8923491f8 1061 Pfam PF00873 AcrB/AcrD/AcrF family 3 1032 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_03370 7e416285c50c1493414b8df8923491f8 1061 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1048 0.0 T 13-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 P40_03370 7e416285c50c1493414b8df8923491f8 1061 SUPERFAMILY SSF82714 728 814 3.01E-19 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_03370 7e416285c50c1493414b8df8923491f8 1061 SUPERFAMILY SSF82693 574 677 1.67E-22 T 13-10-2018 P40_03370 7e416285c50c1493414b8df8923491f8 1061 SUPERFAMILY SSF82693 138 332 7.85E-28 T 13-10-2018 P40_03370 7e416285c50c1493414b8df8923491f8 1061 Gene3D G3DSA:3.30.2090.10 181 277 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_03370 7e416285c50c1493414b8df8923491f8 1061 SUPERFAMILY SSF82714 185 274 1.83E-18 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_03370 7e416285c50c1493414b8df8923491f8 1061 SUPERFAMILY SSF82866 811 1035 1.31E-44 T 13-10-2018 P40_03370 7e416285c50c1493414b8df8923491f8 1061 Gene3D G3DSA:3.30.70.1430 40 823 0.0 T 13-10-2018 P40_21090 c3fbee9bf5ef47b27a3c594205b8c835 343 Gene3D G3DSA:3.40.50.1820 42 343 7.9E-85 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_21090 c3fbee9bf5ef47b27a3c594205b8c835 343 SUPERFAMILY SSF53474 79 343 9.45E-69 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_21090 c3fbee9bf5ef47b27a3c594205b8c835 343 Pfam PF07859 alpha/beta hydrolase fold 113 319 2.0E-64 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 P40_19185 9907827b972bc32dbe16975bc4e879e7 360 SUPERFAMILY SSF56112 19 350 2.35E-45 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_19185 9907827b972bc32dbe16975bc4e879e7 360 Pfam PF01636 Phosphotransferase enzyme family 41 276 1.6E-36 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase P40_19185 9907827b972bc32dbe16975bc4e879e7 360 Gene3D G3DSA:3.30.200.20 18 117 3.5E-21 T 13-10-2018 P40_19185 9907827b972bc32dbe16975bc4e879e7 360 Gene3D G3DSA:3.90.1200.10 143 358 3.2E-47 T 13-10-2018 P40_18675 8ce98b62310db0a9a1a55510c18bee8a 151 SUPERFAMILY SSF74942 83 150 1.83E-15 T 13-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily P40_18675 8ce98b62310db0a9a1a55510c18bee8a 151 Pfam PF17384 RimP C-terminal SH3 domain 85 150 2.8E-16 T 13-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal P40_18675 8ce98b62310db0a9a1a55510c18bee8a 151 Gene3D G3DSA:2.30.30.180 88 147 6.3E-6 T 13-10-2018 P40_18675 8ce98b62310db0a9a1a55510c18bee8a 151 Pfam PF02576 RimP N-terminal domain 11 82 1.6E-27 T 13-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal P40_18675 8ce98b62310db0a9a1a55510c18bee8a 151 Gene3D G3DSA:3.30.300.70 1 79 5.0E-27 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily P40_18675 8ce98b62310db0a9a1a55510c18bee8a 151 SUPERFAMILY SSF75420 2 82 9.42E-26 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily P40_18675 8ce98b62310db0a9a1a55510c18bee8a 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 25.629 T 13-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 P40_05915 ceda5283a80addd78f13f387acf9c0e8 81 Gene3D G3DSA:1.10.260.40 1 73 1.6E-8 T 13-10-2018 P40_05915 ceda5283a80addd78f13f387acf9c0e8 81 SUPERFAMILY SSF47413 6 61 1.93E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_17110 529fa92b4639fcc11bd6f4701ce177eb 307 Gene3D G3DSA:3.40.50.720 174 303 8.9E-23 T 13-10-2018 P40_17110 529fa92b4639fcc11bd6f4701ce177eb 307 Pfam PF13478 XdhC Rossmann domain 175 298 4.6E-22 T 13-10-2018 IPR027051 XdhC Rossmann domain P40_17110 529fa92b4639fcc11bd6f4701ce177eb 307 Pfam PF02625 XdhC and CoxI family 33 96 2.0E-12 T 13-10-2018 IPR003777 XdhC- CoxI P40_00755 d8980792990d34b0935b22da417c5731 690 Pfam PF17191 RecG wedge domain 13 167 1.8E-20 T 13-10-2018 IPR033454 RecG, wedge domain P40_00755 d8980792990d34b0935b22da417c5731 690 SMART SM00487 263 457 3.5E-27 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_00755 d8980792990d34b0935b22da417c5731 690 Pfam PF00270 DEAD/DEAH box helicase 291 428 5.0E-17 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 P40_00755 d8980792990d34b0935b22da417c5731 690 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 661 2.3E-225 T 13-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 P40_00755 d8980792990d34b0935b22da417c5731 690 Gene3D G3DSA:1.10.150.20 2 40 5.3E-5 T 13-10-2018 P40_00755 d8980792990d34b0935b22da417c5731 690 Gene3D G3DSA:2.40.50.140 46 137 4.3E-8 T 13-10-2018 P40_00755 d8980792990d34b0935b22da417c5731 690 Gene3D G3DSA:3.40.50.300 455 627 4.1E-53 T 13-10-2018 P40_00755 d8980792990d34b0935b22da417c5731 690 SMART SM00490 502 586 2.7E-20 T 13-10-2018 IPR001650 Helicase, C-terminal P40_00755 d8980792990d34b0935b22da417c5731 690 SUPERFAMILY SSF52540 178 451 1.45E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_00755 d8980792990d34b0935b22da417c5731 690 Gene3D G3DSA:3.40.50.300 214 448 2.2E-81 T 13-10-2018 P40_00755 d8980792990d34b0935b22da417c5731 690 Pfam PF00271 Helicase conserved C-terminal domain 478 586 2.4E-15 T 13-10-2018 IPR001650 Helicase, C-terminal P40_00755 d8980792990d34b0935b22da417c5731 690 SUPERFAMILY SSF52540 290 650 1.87E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_00755 d8980792990d34b0935b22da417c5731 690 SUPERFAMILY SSF50249 8 172 1.49E-37 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_16475 4c2fd88d51341c79923c23f1ada58026 579 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 215 1.3E-16 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 P40_16475 4c2fd88d51341c79923c23f1ada58026 579 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 15 567 42.791 T 13-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P40_16475 4c2fd88d51341c79923c23f1ada58026 579 Pfam PF00905 Penicillin binding protein transpeptidase domain 255 551 4.2E-78 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 P40_16475 4c2fd88d51341c79923c23f1ada58026 579 SUPERFAMILY SSF56519 62 229 2.35E-41 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 P40_16475 4c2fd88d51341c79923c23f1ada58026 579 SUPERFAMILY SSF56601 181 571 9.98E-97 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like P40_16475 4c2fd88d51341c79923c23f1ada58026 579 Gene3D G3DSA:3.30.450.330 231 555 5.0E-115 T 13-10-2018 P40_16475 4c2fd88d51341c79923c23f1ada58026 579 Gene3D G3DSA:3.90.1310.30 58 230 5.6E-44 T 13-10-2018 P40_16475 4c2fd88d51341c79923c23f1ada58026 579 Gene3D G3DSA:3.40.710.10 291 473 5.0E-115 T 13-10-2018 P40_19380 28da0c1c8e6f85d0ef3f24aaec441ed2 387 Pfam PF00529 HlyD membrane-fusion protein of T1SS 37 367 8.4E-9 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 P40_19380 28da0c1c8e6f85d0ef3f24aaec441ed2 387 SUPERFAMILY SSF111369 61 118 1.18E-5 T 13-10-2018 P40_19380 28da0c1c8e6f85d0ef3f24aaec441ed2 387 SUPERFAMILY SSF111369 217 335 9.15E-12 T 13-10-2018 P40_19380 28da0c1c8e6f85d0ef3f24aaec441ed2 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 188 333 1.2E-21 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain P40_19380 28da0c1c8e6f85d0ef3f24aaec441ed2 387 Gene3D G3DSA:2.40.30.170 271 386 4.1E-38 T 13-10-2018 P40_19380 28da0c1c8e6f85d0ef3f24aaec441ed2 387 Gene3D G3DSA:2.40.50.100 61 94 1.7E-10 T 13-10-2018 P40_19380 28da0c1c8e6f85d0ef3f24aaec441ed2 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 73 93 1.1E-10 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_19380 28da0c1c8e6f85d0ef3f24aaec441ed2 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 269 290 1.1E-10 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_19380 28da0c1c8e6f85d0ef3f24aaec441ed2 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 372 387 1.1E-10 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_19380 28da0c1c8e6f85d0ef3f24aaec441ed2 387 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 301 325 1.1E-10 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_19380 28da0c1c8e6f85d0ef3f24aaec441ed2 387 Gene3D G3DSA:1.10.287.470 95 131 1.7E-10 T 13-10-2018 P40_19380 28da0c1c8e6f85d0ef3f24aaec441ed2 387 Gene3D G3DSA:1.10.287.470 137 214 1.0E-7 T 13-10-2018 P40_19060 4f5d7489229804ab0de150c61c36701f 232 SUPERFAMILY SSF48008 81 212 1.6E-19 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_19060 4f5d7489229804ab0de150c61c36701f 232 Gene3D G3DSA:1.20.120.530 78 216 6.6E-18 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_19060 4f5d7489229804ab0de150c61c36701f 232 Gene3D G3DSA:1.10.10.10 3 77 2.3E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_19060 4f5d7489229804ab0de150c61c36701f 232 Pfam PF07729 FCD domain 85 208 2.7E-16 T 13-10-2018 IPR011711 GntR, C-terminal P40_19060 4f5d7489229804ab0de150c61c36701f 232 SMART SM00345 17 75 3.8E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_19060 4f5d7489229804ab0de150c61c36701f 232 SMART SM00895 85 209 5.2E-12 T 13-10-2018 IPR011711 GntR, C-terminal P40_19060 4f5d7489229804ab0de150c61c36701f 232 SUPERFAMILY SSF46785 11 84 7.2E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_19060 4f5d7489229804ab0de150c61c36701f 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 64 6.5E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_00990 7eabf72f33fbd091c6fd796c85035565 233 Gene3D G3DSA:1.25.40.10 60 220 3.0E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_00990 7eabf72f33fbd091c6fd796c85035565 233 SUPERFAMILY SSF48452 81 202 8.85E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 179 330 3.5E-36 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 SUPERFAMILY SSF55124 19 152 7.85E-29 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 SUPERFAMILY SSF56014 153 348 1.44E-46 T 13-10-2018 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 Gene3D G3DSA:3.30.413.10 207 342 2.3E-38 T 13-10-2018 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 479 495 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 SUPERFAMILY SSF56014 433 557 1.22E-29 T 13-10-2018 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 SUPERFAMILY SSF55124 350 421 8.67E-16 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 477 553 0.3 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 PRINTS PR00397 Sirohaem Fe-binding site signature 431 449 2.7E-7 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 PRINTS PR00397 Sirohaem Fe-binding site signature 479 497 2.7E-7 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 Gene3D G3DSA:3.30.413.10 429 563 1.3E-30 T 13-10-2018 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 Gene3D G3DSA:3.90.480.20 13 184 6.4E-21 T 13-10-2018 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 Gene3D G3DSA:3.90.480.10 343 422 1.2E-15 T 13-10-2018 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 415 8.8E-13 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_14145 ef713eac91c9a117de8d395b7b12c360 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 83 142 1.5E-13 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_12620 ed2985f7241946d711db35718603992c 236 SMART SM00345 24 82 1.5E-10 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_12620 ed2985f7241946d711db35718603992c 236 Gene3D G3DSA:1.20.120.530 87 223 8.2E-25 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_12620 ed2985f7241946d711db35718603992c 236 SUPERFAMILY SSF46785 19 86 2.01E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_12620 ed2985f7241946d711db35718603992c 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 2.0E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_12620 ed2985f7241946d711db35718603992c 236 Gene3D G3DSA:1.10.10.10 16 83 1.9E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_12620 ed2985f7241946d711db35718603992c 236 Pfam PF07729 FCD domain 92 212 1.2E-19 T 13-10-2018 IPR011711 GntR, C-terminal P40_12620 ed2985f7241946d711db35718603992c 236 SUPERFAMILY SSF48008 88 224 2.88E-23 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_12620 ed2985f7241946d711db35718603992c 236 SMART SM00895 92 216 1.2E-16 T 13-10-2018 IPR011711 GntR, C-terminal P40_09445 6665342a5811d57c3ebf55b2b8435228 72 Gene3D G3DSA:2.40.50.140 1 72 1.3E-36 T 13-10-2018 P40_09445 6665342a5811d57c3ebf55b2b8435228 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 6.2E-27 T 13-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 P40_09445 6665342a5811d57c3ebf55b2b8435228 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.7E-37 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 P40_09445 6665342a5811d57c3ebf55b2b8435228 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.946 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 P40_09445 6665342a5811d57c3ebf55b2b8435228 72 SMART SM00316 4 72 1.6E-6 T 13-10-2018 IPR022967 RNA-binding domain, S1 P40_09445 6665342a5811d57c3ebf55b2b8435228 72 SUPERFAMILY SSF50249 1 70 2.45E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_20000 0af850ce583335b8f18dd673981e0abc 211 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 13-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 P40_20000 0af850ce583335b8f18dd673981e0abc 211 Gene3D G3DSA:3.40.1050.10 1 210 4.1E-81 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 P40_20000 0af850ce583335b8f18dd673981e0abc 211 Pfam PF00484 Carbonic anhydrase 38 188 1.8E-51 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 P40_20000 0af850ce583335b8f18dd673981e0abc 211 SMART SM00947 30 192 1.1E-64 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 P40_20000 0af850ce583335b8f18dd673981e0abc 211 SUPERFAMILY SSF53056 2 202 2.09E-72 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 P40_20000 0af850ce583335b8f18dd673981e0abc 211 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 13-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 P40_11785 7063276cd0d74873d3721e7851e27bfd 348 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 347 2.4E-100 T 13-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 P40_11785 7063276cd0d74873d3721e7851e27bfd 348 SUPERFAMILY SSF50331 240 347 1.21E-15 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal P40_11785 7063276cd0d74873d3721e7851e27bfd 348 Gene3D G3DSA:2.40.50.100 285 348 2.2E-10 T 13-10-2018 P40_11785 7063276cd0d74873d3721e7851e27bfd 348 SUPERFAMILY SSF52540 13 225 5.44E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_11785 7063276cd0d74873d3721e7851e27bfd 348 Pfam PF00005 ABC transporter 19 156 3.0E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_11785 7063276cd0d74873d3721e7851e27bfd 348 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_11785 7063276cd0d74873d3721e7851e27bfd 348 Pfam PF03459 TOBE domain 286 347 6.1E-12 T 13-10-2018 IPR005116 Transport-associated OB, type 1 P40_11785 7063276cd0d74873d3721e7851e27bfd 348 SMART SM00382 24 203 9.4E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_11785 7063276cd0d74873d3721e7851e27bfd 348 Gene3D G3DSA:3.40.50.300 10 233 2.7E-49 T 13-10-2018 P40_02335 4fe925ec6757ceb7fdfdd4bc55e6edbe 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 3.3E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_02335 4fe925ec6757ceb7fdfdd4bc55e6edbe 236 Gene3D G3DSA:1.10.10.10 131 236 2.6E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_02335 4fe925ec6757ceb7fdfdd4bc55e6edbe 236 Pfam PF00072 Response regulator receiver domain 8 118 6.2E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_02335 4fe925ec6757ceb7fdfdd4bc55e6edbe 236 SMART SM00862 157 233 9.0E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_02335 4fe925ec6757ceb7fdfdd4bc55e6edbe 236 SUPERFAMILY SSF52172 7 127 5.27E-41 T 13-10-2018 IPR011006 CheY-like superfamily P40_02335 4fe925ec6757ceb7fdfdd4bc55e6edbe 236 SUPERFAMILY SSF46894 135 235 6.8E-27 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_02335 4fe925ec6757ceb7fdfdd4bc55e6edbe 236 Gene3D G3DSA:3.40.50.2300 1 126 1.3E-40 T 13-10-2018 P40_02335 4fe925ec6757ceb7fdfdd4bc55e6edbe 236 SMART SM00448 6 117 5.0E-41 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_12325 93d412bc76e2700991240dbc0ba978d9 254 SUPERFAMILY SSF48613 8 252 4.89E-77 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 P40_12325 93d412bc76e2700991240dbc0ba978d9 254 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 10 244 1.1E-117 T 13-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 P40_12325 93d412bc76e2700991240dbc0ba978d9 254 Pfam PF03070 TENA/THI-4/PQQC family 17 226 2.2E-60 T 13-10-2018 IPR004305 Thiaminase-2/PQQC P40_12325 93d412bc76e2700991240dbc0ba978d9 254 Gene3D G3DSA:1.20.910.10 8 253 8.7E-79 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 P40_12325 93d412bc76e2700991240dbc0ba978d9 254 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 254 135.795 T 13-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 P40_04725 d60815c41cbd56ab357c32dfc89fc114 333 SUPERFAMILY SSF81464 14 114 1.64E-22 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04725 d60815c41cbd56ab357c32dfc89fc114 333 Pfam PF06481 COX Aromatic Rich Motif 245 289 2.4E-18 T 13-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 P40_04725 d60815c41cbd56ab357c32dfc89fc114 333 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 11 243 3.0E-107 T 13-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 P40_04725 d60815c41cbd56ab357c32dfc89fc114 333 SUPERFAMILY SSF49503 130 285 7.52E-48 T 13-10-2018 IPR008972 Cupredoxin P40_04725 d60815c41cbd56ab357c32dfc89fc114 333 Gene3D G3DSA:1.10.287.90 24 109 1.9E-31 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04725 d60815c41cbd56ab357c32dfc89fc114 333 Gene3D G3DSA:2.60.40.420 110 286 3.3E-51 T 13-10-2018 IPR008972 Cupredoxin P40_04725 d60815c41cbd56ab357c32dfc89fc114 333 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 155 225 3.5E-6 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04725 d60815c41cbd56ab357c32dfc89fc114 333 PIRSF PIRSF000292 1 315 3.9E-128 T 13-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 SUPERFAMILY SSF46626 293 395 9.17E-24 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 PRINTS PR01166 Cytochrome c oxidase subunit II signature 241 258 2.6E-29 T 13-10-2018 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 PRINTS PR01166 Cytochrome c oxidase subunit II signature 195 216 2.6E-29 T 13-10-2018 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 PRINTS PR01166 Cytochrome c oxidase subunit II signature 100 120 2.6E-29 T 13-10-2018 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 PRINTS PR01166 Cytochrome c oxidase subunit II signature 88 100 2.6E-29 T 13-10-2018 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 PRINTS PR01166 Cytochrome c oxidase subunit II signature 122 141 2.6E-29 T 13-10-2018 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 PRINTS PR01166 Cytochrome c oxidase subunit II signature 259 276 2.6E-29 T 13-10-2018 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 Gene3D G3DSA:2.60.40.420 123 289 3.1E-48 T 13-10-2018 IPR008972 Cupredoxin P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 40 286 7.0E-55 T 13-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 32 112 1.7E-16 T 13-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 307 380 6.1E-14 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 220 270 - T 13-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 Gene3D G3DSA:1.10.760.10 290 402 3.5E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 Gene3D G3DSA:1.10.287.90 29 121 3.9E-25 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 SUPERFAMILY SSF49503 119 325 4.87E-48 T 13-10-2018 IPR008972 Cupredoxin P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 191 277 4.4E-29 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05400 0165c0fb87d412e3b97d0a6d8ca9f56d 402 SUPERFAMILY SSF81464 23 120 1.62E-25 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_13220 dcb4201c7560994ac4d5ffc134ffdfd1 197 Pfam PF02545 Maf-like protein 9 190 3.0E-46 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 P40_13220 dcb4201c7560994ac4d5ffc134ffdfd1 197 PIRSF PIRSF006305 3 196 1.0E-42 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 P40_13220 dcb4201c7560994ac4d5ffc134ffdfd1 197 SUPERFAMILY SSF52972 7 189 4.05E-60 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like P40_13220 dcb4201c7560994ac4d5ffc134ffdfd1 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 7 189 2.3E-51 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 P40_13220 dcb4201c7560994ac4d5ffc134ffdfd1 197 Gene3D G3DSA:3.90.950.10 7 196 7.4E-63 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like P40_13220 dcb4201c7560994ac4d5ffc134ffdfd1 197 Hamap MF_00528 Septum formation protein Maf [maf]. 8 196 29.957 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 P40_06745 2882d5ffb1a7a614e22e576e701f1ffa 374 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 16 342 3.6E-101 T 13-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 P40_06745 2882d5ffb1a7a614e22e576e701f1ffa 374 Gene3D G3DSA:3.40.250.10 7 134 5.8E-29 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_06745 2882d5ffb1a7a614e22e576e701f1ffa 374 SUPERFAMILY SSF52821 6 156 2.47E-19 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_06745 2882d5ffb1a7a614e22e576e701f1ffa 374 SMART SM00450 3 133 2.3E-4 T 13-10-2018 IPR001763 Rhodanese-like domain P40_06745 2882d5ffb1a7a614e22e576e701f1ffa 374 SUPERFAMILY SSF52540 141 292 1.77E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_06745 2882d5ffb1a7a614e22e576e701f1ffa 374 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 2 361 48.661 T 13-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 P40_04055 33f1c100ccfab7e3a8594199882969fd 370 SUPERFAMILY SSF142695 205 367 4.71E-43 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 P40_04055 33f1c100ccfab7e3a8594199882969fd 370 Gene3D G3DSA:3.90.870.10 1 206 6.9E-91 T 13-10-2018 P40_04055 33f1c100ccfab7e3a8594199882969fd 370 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 2.2E-86 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_04055 33f1c100ccfab7e3a8594199882969fd 370 SUPERFAMILY SSF55821 2 201 2.75E-88 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily P40_04055 33f1c100ccfab7e3a8594199882969fd 370 PIRSF PIRSF001259 1 370 1.1E-122 T 13-10-2018 P40_04055 33f1c100ccfab7e3a8594199882969fd 370 Pfam PF00925 GTP cyclohydrolase II 208 366 4.2E-32 T 13-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 P40_04055 33f1c100ccfab7e3a8594199882969fd 370 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 39.456 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_04055 33f1c100ccfab7e3a8594199882969fd 370 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 3.0E-76 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_12805 bdfd4179d263c397ab1be9bc71875293 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 368 9.2E-194 T 13-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 P40_12805 bdfd4179d263c397ab1be9bc71875293 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 13-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 P40_12805 bdfd4179d263c397ab1be9bc71875293 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 122 6.5E-24 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 P40_12805 bdfd4179d263c397ab1be9bc71875293 370 Gene3D G3DSA:3.30.360.10 140 351 4.1E-85 T 13-10-2018 P40_12805 bdfd4179d263c397ab1be9bc71875293 370 Gene3D G3DSA:3.40.50.720 1 139 3.8E-60 T 13-10-2018 P40_12805 bdfd4179d263c397ab1be9bc71875293 370 SUPERFAMILY SSF51735 1 147 5.26E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_12805 bdfd4179d263c397ab1be9bc71875293 370 SUPERFAMILY SSF55347 134 355 2.2E-79 T 13-10-2018 P40_12805 bdfd4179d263c397ab1be9bc71875293 370 SMART SM00859 3 122 7.0E-30 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 P40_12805 bdfd4179d263c397ab1be9bc71875293 370 PIRSF PIRSF000148 1 370 3.4E-70 T 13-10-2018 P40_12805 bdfd4179d263c397ab1be9bc71875293 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 354 4.9E-59 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 P40_12805 bdfd4179d263c397ab1be9bc71875293 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.33 T 13-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 P40_16900 c15fb85cd65cf22c71df34c9364917a2 95 SUPERFAMILY SSF141000 3 93 1.24E-26 T 13-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 P40_16900 c15fb85cd65cf22c71df34c9364917a2 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 6.4E-25 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 P40_16900 c15fb85cd65cf22c71df34c9364917a2 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 5.6E-17 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 P40_16900 c15fb85cd65cf22c71df34c9364917a2 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 21.064 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 P40_16900 c15fb85cd65cf22c71df34c9364917a2 95 Gene3D G3DSA:1.10.20.60 1 93 6.1E-21 T 13-10-2018 P40_07760 68eb566eadf928b8831d3331348462e1 485 Gene3D G3DSA:2.20.200.10 96 349 1.0E-147 T 13-10-2018 P40_07760 68eb566eadf928b8831d3331348462e1 485 Gene3D G3DSA:1.20.1600.10 50 460 1.0E-147 T 13-10-2018 P40_07760 68eb566eadf928b8831d3331348462e1 485 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 460 3.5E-131 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 P40_07760 68eb566eadf928b8831d3331348462e1 485 SUPERFAMILY SSF56954 3 463 2.35E-120 T 13-10-2018 P40_07760 68eb566eadf928b8831d3331348462e1 485 Pfam PF02321 Outer membrane efflux protein 280 458 4.9E-32 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_07760 68eb566eadf928b8831d3331348462e1 485 Pfam PF02321 Outer membrane efflux protein 59 249 2.3E-27 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 SUPERFAMILY SSF52343 266 403 6.02E-36 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 Pfam PF00175 Oxidoreductase NAD-binding domain 273 379 9.2E-14 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 Gene3D G3DSA:2.40.30.10 150 260 1.4E-35 T 13-10-2018 P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 Gene3D G3DSA:1.10.490.10 1 144 5.9E-56 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 PRINTS PR00406 Cytochrome B5 reductase signature 247 261 4.0E-7 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 PRINTS PR00406 Cytochrome B5 reductase signature 367 375 4.0E-7 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 PRINTS PR00406 Cytochrome B5 reductase signature 272 291 4.0E-7 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 7.4E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 367 375 7.4E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 234 243 7.4E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 272 291 7.4E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 SUPERFAMILY SSF46458 1 144 3.58E-39 T 13-10-2018 IPR009050 Globin-like superfamily P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 Pfam PF00970 Oxidoreductase FAD-binding domain 157 259 2.0E-8 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 Gene3D G3DSA:3.40.50.80 265 403 1.8E-32 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 Pfam PF00042 Globin 7 102 3.2E-9 T 13-10-2018 IPR000971 Globin GO:0020037 P40_14470 674ee55b8a14bfdec77270c1d4277c98 407 SUPERFAMILY SSF63380 150 259 5.88E-27 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel P40_15875 4075584553ee84c21169d2cfd3b1555b 706 SUPERFAMILY SSF56300 374 641 4.59E-50 T 13-10-2018 P40_15875 4075584553ee84c21169d2cfd3b1555b 706 Gene3D G3DSA:3.60.21.10 371 614 1.8E-41 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like P40_15875 4075584553ee84c21169d2cfd3b1555b 706 SUPERFAMILY SSF49363 225 368 9.16E-14 T 13-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 P40_15875 4075584553ee84c21169d2cfd3b1555b 706 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 238 366 1.4E-15 T 13-10-2018 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 P40_15875 4075584553ee84c21169d2cfd3b1555b 706 Pfam PF00149 Calcineurin-like phosphoesterase 375 559 3.4E-16 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 P40_18905 7bdb2b1b30949c6a8d5e066e931b15c9 302 SUPERFAMILY SSF53850 91 296 4.34E-49 T 13-10-2018 P40_18905 7bdb2b1b30949c6a8d5e066e931b15c9 302 Gene3D G3DSA:3.40.190.290 92 293 1.7E-66 T 13-10-2018 P40_18905 7bdb2b1b30949c6a8d5e066e931b15c9 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.7E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_18905 7bdb2b1b30949c6a8d5e066e931b15c9 302 Gene3D G3DSA:1.10.10.10 3 89 6.4E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_18905 7bdb2b1b30949c6a8d5e066e931b15c9 302 SUPERFAMILY SSF46785 3 113 2.51E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_18905 7bdb2b1b30949c6a8d5e066e931b15c9 302 Pfam PF03466 LysR substrate binding domain 89 291 1.4E-48 T 13-10-2018 IPR005119 LysR, substrate-binding P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 SUPERFAMILY SSF52172 656 786 1.42E-25 T 13-10-2018 IPR011006 CheY-like superfamily P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 SMART SM00448 797 913 8.2E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 SMART SM00448 655 774 1.2E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 Gene3D G3DSA:2.60.40.2380 52 187 1.6E-7 T 13-10-2018 P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 Pfam PF07695 7TM diverse intracellular signalling 197 382 2.7E-13 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 Pfam PF00072 Response regulator receiver domain 799 912 5.8E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 Pfam PF00072 Response regulator receiver domain 658 774 1.3E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 Gene3D G3DSA:3.40.50.2300 854 925 1.1E-17 T 13-10-2018 P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 SUPERFAMILY SSF55874 474 636 1.61E-13 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 Pfam PF07696 7TMR-DISM extracellular 2 55 183 1.2E-17 T 13-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 Pfam PF00512 His Kinase A (phospho-acceptor) domain 421 483 1.6E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 SUPERFAMILY SSF52172 796 919 2.42E-36 T 13-10-2018 IPR011006 CheY-like superfamily P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 Gene3D G3DSA:3.30.565.10 487 639 4.6E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 Gene3D G3DSA:3.40.50.12330 793 853 1.3E-20 T 13-10-2018 P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 Gene3D G3DSA:3.40.50.12740 655 792 9.2E-24 T 13-10-2018 P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 SMART SM00388 420 485 6.7E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 Gene3D G3DSA:1.10.287.130 388 483 2.8E-18 T 13-10-2018 P40_04800 05b7aa076580ec9c98d38bf3b4fd5af5 929 SUPERFAMILY SSF47384 411 483 1.75E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_19550 66527cd495261bc85747e2c984b294fe 319 Pfam PF00561 alpha/beta hydrolase fold 59 299 1.2E-24 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_19550 66527cd495261bc85747e2c984b294fe 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 258 272 4.9E-16 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_19550 66527cd495261bc85747e2c984b294fe 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 129 142 4.9E-16 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_19550 66527cd495261bc85747e2c984b294fe 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 99 4.9E-16 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_19550 66527cd495261bc85747e2c984b294fe 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 143 156 4.9E-16 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_19550 66527cd495261bc85747e2c984b294fe 319 SUPERFAMILY SSF53474 34 310 3.43E-56 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_19550 66527cd495261bc85747e2c984b294fe 319 Gene3D G3DSA:3.40.50.1820 24 314 1.5E-55 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_19550 66527cd495261bc85747e2c984b294fe 319 PRINTS PR00412 Epoxide hydrolase signature 290 312 2.5E-7 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_19550 66527cd495261bc85747e2c984b294fe 319 PRINTS PR00412 Epoxide hydrolase signature 256 272 2.5E-7 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_19550 66527cd495261bc85747e2c984b294fe 319 PRINTS PR00412 Epoxide hydrolase signature 143 156 2.5E-7 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_19550 66527cd495261bc85747e2c984b294fe 319 PRINTS PR00412 Epoxide hydrolase signature 84 99 2.5E-7 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_12165 fbe29cf9f617b724e762df9bd791e0a2 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 413 9.9E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_12165 fbe29cf9f617b724e762df9bd791e0a2 432 SUPERFAMILY SSF47384 197 263 2.55E-9 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_12165 fbe29cf9f617b724e762df9bd791e0a2 432 SUPERFAMILY SSF55874 268 412 4.58E-23 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_12165 fbe29cf9f617b724e762df9bd791e0a2 432 Gene3D G3DSA:1.10.287.130 186 264 1.6E-12 T 13-10-2018 P40_12165 fbe29cf9f617b724e762df9bd791e0a2 432 SMART SM00387 309 414 9.6E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_12165 fbe29cf9f617b724e762df9bd791e0a2 432 SMART SM00388 202 267 1.3E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_12165 fbe29cf9f617b724e762df9bd791e0a2 432 Gene3D G3DSA:3.30.565.10 267 412 9.0E-19 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_12165 fbe29cf9f617b724e762df9bd791e0a2 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 260 7.8E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 SMART SM00388 231 295 1.7E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 SUPERFAMILY SSF47384 215 296 7.65E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 Pfam PF00672 HAMP domain 178 226 3.5E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 SUPERFAMILY SSF55874 285 449 4.06E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 Gene3D G3DSA:1.20.1480.50 141 234 2.1E-10 T 13-10-2018 P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 Gene3D G3DSA:3.30.565.10 301 453 1.0E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 Gene3D G3DSA:1.10.287.130 237 296 2.4E-12 T 13-10-2018 P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 SMART SM00304 178 230 4.7E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 5.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 5.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 5.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 5.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 SUPERFAMILY SSF158472 178 226 9.15E-8 T 13-10-2018 P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 SMART SM00387 339 451 6.5E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 450 1.3E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_16285 9cc2e2223961d63ce89120bf34bc1ac0 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 295 2.9E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_02030 3c3b9881c9261967272942444c45fd31 210 Gene3D G3DSA:1.10.357.10 73 210 3.0E-35 T 13-10-2018 P40_02030 3c3b9881c9261967272942444c45fd31 210 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 154 208 4.1E-15 T 13-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type P40_02030 3c3b9881c9261967272942444c45fd31 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 4.7E-18 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_02030 3c3b9881c9261967272942444c45fd31 210 SUPERFAMILY SSF48498 89 207 1.56E-7 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_02030 3c3b9881c9261967272942444c45fd31 210 Gene3D G3DSA:1.10.10.60 12 66 3.1E-23 T 13-10-2018 P40_02030 3c3b9881c9261967272942444c45fd31 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 5.5E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_02030 3c3b9881c9261967272942444c45fd31 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 5.5E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_02030 3c3b9881c9261967272942444c45fd31 210 SUPERFAMILY SSF46689 11 90 4.49E-21 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_02475 2a8b4179885f085b87ffd8cb09569c07 177 SUPERFAMILY SSF46626 1 119 1.06E-8 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_02475 2a8b4179885f085b87ffd8cb09569c07 177 Gene3D G3DSA:1.10.760.10 34 150 3.7E-6 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_20510 f77bf6dccd1ae0ee5d90680158d06955 262 Gene3D G3DSA:3.90.226.10 1 203 4.3E-66 T 13-10-2018 P40_20510 f77bf6dccd1ae0ee5d90680158d06955 262 Gene3D G3DSA:1.10.12.10 207 262 1.2E-11 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_20510 f77bf6dccd1ae0ee5d90680158d06955 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 261 6.0E-51 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_20510 f77bf6dccd1ae0ee5d90680158d06955 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 P40_20510 f77bf6dccd1ae0ee5d90680158d06955 262 SUPERFAMILY SSF52096 2 261 2.28E-76 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_03500 fad419a6b0947d513b99c7874610d7eb 369 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 29 2.0E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal P40_03500 fad419a6b0947d513b99c7874610d7eb 369 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 35 300 2.6E-38 T 13-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 P40_03500 fad419a6b0947d513b99c7874610d7eb 369 Gene3D G3DSA:3.40.50.2300 36 296 6.9E-103 T 13-10-2018 P40_03500 fad419a6b0947d513b99c7874610d7eb 369 Gene3D G3DSA:3.40.50.2300 142 360 6.9E-103 T 13-10-2018 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 SMART SM00836 468 584 2.0E-40 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 Pfam PF00750 tRNA synthetases class I (R) 100 454 1.1E-133 T 13-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 SUPERFAMILY SSF55190 9 102 1.03E-22 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 Gene3D G3DSA:1.10.730.10 467 584 2.1E-32 T 13-10-2018 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 Pfam PF05746 DALR anticodon binding domain 468 584 1.1E-32 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 SMART SM01016 3 91 7.9E-36 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 28 584 4.3E-174 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 584 27.385 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 90 2.4E-23 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 Gene3D G3DSA:3.30.1360.70 3 110 1.2E-26 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 SUPERFAMILY SSF52374 113 460 2.85E-91 T 13-10-2018 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 PRINTS PR01038 Arginyl-tRNA synthetase signature 119 134 1.9E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 PRINTS PR01038 Arginyl-tRNA synthetase signature 134 150 1.9E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 PRINTS PR01038 Arginyl-tRNA synthetase signature 311 332 1.9E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 PRINTS PR01038 Arginyl-tRNA synthetase signature 158 171 1.9E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 127 138 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 SUPERFAMILY SSF47323 462 584 7.85E-35 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_19385 87b41ea7e70c6e68e74a4b84aa4ce039 584 Gene3D G3DSA:3.40.50.620 116 466 9.7E-111 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_11320 9d350fbc5caff066d5e285ddbb8d7459 455 SUPERFAMILY SSF56672 34 382 5.15E-54 T 13-10-2018 P40_11320 9d350fbc5caff066d5e285ddbb8d7459 455 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 101 307 1.4E-42 T 13-10-2018 IPR000477 Reverse transcriptase domain P40_11320 9d350fbc5caff066d5e285ddbb8d7459 455 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 164 182 3.5E-6 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 P40_11320 9d350fbc5caff066d5e285ddbb8d7459 455 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 96 109 3.5E-6 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 P40_11320 9d350fbc5caff066d5e285ddbb8d7459 455 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 222 235 3.5E-6 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 P40_11320 9d350fbc5caff066d5e285ddbb8d7459 455 Pfam PF08388 Group II intron, maturase-specific domain 323 400 9.1E-17 T 13-10-2018 IPR013597 Group II intron, maturase-specific P40_11320 9d350fbc5caff066d5e285ddbb8d7459 455 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 46 388 2.7E-124 T 13-10-2018 IPR030931 Group II intron reverse transcriptase/maturase P40_17620 dd7f448620d71293672205dd48ce9518 369 SUPERFAMILY SSF53335 21 178 1.24E-22 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_17620 dd7f448620d71293672205dd48ce9518 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 55 7.1E-8 T 13-10-2018 P40_17620 dd7f448620d71293672205dd48ce9518 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 154 7.1E-8 T 13-10-2018 P40_17620 dd7f448620d71293672205dd48ce9518 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 101 113 7.1E-8 T 13-10-2018 P40_17620 dd7f448620d71293672205dd48ce9518 369 Gene3D G3DSA:3.40.50.150 22 204 1.6E-17 T 13-10-2018 P40_17925 3d7a0b4b186bef29e2f9494cf4b1f5bf 528 Pfam PF03023 MviN-like protein 46 492 2.0E-149 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P40_17925 3d7a0b4b186bef29e2f9494cf4b1f5bf 528 PIRSF PIRSF002869 17 527 2.5E-163 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P40_17925 3d7a0b4b186bef29e2f9494cf4b1f5bf 528 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 21 487 20.581 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P40_17925 3d7a0b4b186bef29e2f9494cf4b1f5bf 528 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 21 520 5.2E-146 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P40_17925 3d7a0b4b186bef29e2f9494cf4b1f5bf 528 PRINTS PR01806 Virulence factor MviN signature 279 305 6.9E-82 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P40_17925 3d7a0b4b186bef29e2f9494cf4b1f5bf 528 PRINTS PR01806 Virulence factor MviN signature 377 396 6.9E-82 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P40_17925 3d7a0b4b186bef29e2f9494cf4b1f5bf 528 PRINTS PR01806 Virulence factor MviN signature 151 175 6.9E-82 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P40_17925 3d7a0b4b186bef29e2f9494cf4b1f5bf 528 PRINTS PR01806 Virulence factor MviN signature 70 86 6.9E-82 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P40_17925 3d7a0b4b186bef29e2f9494cf4b1f5bf 528 PRINTS PR01806 Virulence factor MviN signature 175 196 6.9E-82 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P40_17925 3d7a0b4b186bef29e2f9494cf4b1f5bf 528 PRINTS PR01806 Virulence factor MviN signature 429 446 6.9E-82 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P40_17925 3d7a0b4b186bef29e2f9494cf4b1f5bf 528 PRINTS PR01806 Virulence factor MviN signature 51 70 6.9E-82 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P40_11850 a885f20284267dbabb29aafbddbcd209 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 1.7E-42 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_11850 a885f20284267dbabb29aafbddbcd209 387 Gene3D G3DSA:1.20.140.10 239 383 2.3E-49 T 13-10-2018 P40_11850 a885f20284267dbabb29aafbddbcd209 387 PIRSF PIRSF016578 135 387 8.9E-10 T 13-10-2018 P40_11850 a885f20284267dbabb29aafbddbcd209 387 PIRSF PIRSF016578 11 101 0.049 T 13-10-2018 P40_11850 a885f20284267dbabb29aafbddbcd209 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 4.4E-27 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_11850 a885f20284267dbabb29aafbddbcd209 387 SUPERFAMILY SSF47203 233 385 1.93E-48 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_11850 a885f20284267dbabb29aafbddbcd209 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_11850 a885f20284267dbabb29aafbddbcd209 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 123 6.8E-39 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_11850 a885f20284267dbabb29aafbddbcd209 387 Gene3D G3DSA:2.40.110.10 126 238 4.3E-45 T 13-10-2018 P40_11850 a885f20284267dbabb29aafbddbcd209 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_11850 a885f20284267dbabb29aafbddbcd209 387 SUPERFAMILY SSF56645 6 247 1.16E-88 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_11850 a885f20284267dbabb29aafbddbcd209 387 Gene3D G3DSA:1.10.540.10 3 125 5.4E-48 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_19150 aa300b0240db29473a43110b506da849 328 Gene3D G3DSA:3.30.1780.10 8 322 8.3E-108 T 13-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 P40_19150 aa300b0240db29473a43110b506da849 328 PIRSF PIRSF001439 32 312 1.0E-55 T 13-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 P40_19150 aa300b0240db29473a43110b506da849 328 SUPERFAMILY SSF51735 15 325 8.11E-86 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_19150 aa300b0240db29473a43110b506da849 328 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 6 297 6.6E-79 T 13-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 P40_19150 aa300b0240db29473a43110b506da849 328 Gene3D G3DSA:3.40.50.720 117 284 8.3E-108 T 13-10-2018 P40_19390 e3a5f012115a031659ecde7a5dd877c7 217 Pfam PF05036 Sporulation related domain 139 207 1.1E-15 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 P40_19390 e3a5f012115a031659ecde7a5dd877c7 217 SUPERFAMILY SSF110997 138 213 2.75E-19 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 P40_19390 e3a5f012115a031659ecde7a5dd877c7 217 Gene3D G3DSA:3.30.70.1070 134 215 1.5E-18 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 P40_01910 6e4760c172453858920dc18b2aeed3c7 436 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 427 1.2E-94 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_01910 6e4760c172453858920dc18b2aeed3c7 436 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 432 8.6E-103 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_01910 6e4760c172453858920dc18b2aeed3c7 436 PIRSF PIRSF006066 5 436 1.4E-91 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_00350 ce36168827247b28ce48c1163d5c8280 127 SMART SM00448 8 121 7.1E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_00350 ce36168827247b28ce48c1163d5c8280 127 Gene3D G3DSA:3.40.50.12740 7 127 1.3E-38 T 13-10-2018 P40_00350 ce36168827247b28ce48c1163d5c8280 127 Pfam PF00072 Response regulator receiver domain 10 121 1.6E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_00350 ce36168827247b28ce48c1163d5c8280 127 SUPERFAMILY SSF52172 6 126 1.57E-36 T 13-10-2018 IPR011006 CheY-like superfamily P40_02595 4f76e840c2a6af5e83d5a5000cd97b22 298 Gene3D G3DSA:1.10.3720.10 85 291 9.2E-24 T 13-10-2018 IPR035906 MetI-like superfamily P40_02595 4f76e840c2a6af5e83d5a5000cd97b22 298 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 71 1.8E-9 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain P40_02595 4f76e840c2a6af5e83d5a5000cd97b22 298 SUPERFAMILY SSF161098 89 276 3.27E-26 T 13-10-2018 IPR035906 MetI-like superfamily P40_02595 4f76e840c2a6af5e83d5a5000cd97b22 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 7.1E-25 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 PRINTS PR00397 Sirohaem Fe-binding site signature 634 652 1.1E-6 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 PRINTS PR00397 Sirohaem Fe-binding site signature 677 695 1.1E-6 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.4E-6 T 13-10-2018 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 1.4E-6 T 13-10-2018 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 282 1.4E-6 T 13-10-2018 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.4E-6 T 13-10-2018 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 Gene3D G3DSA:3.50.50.60 110 245 1.3E-77 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 558 619 1.2E-11 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 PIRSF PIRSF037149 1 833 0.0 T 13-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 SUPERFAMILY SSF51905 2 189 3.49E-39 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 SUPERFAMILY SSF56014 631 806 1.44E-50 T 13-10-2018 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 630 766 4.1E-17 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 Pfam PF04324 BFD-like [2Fe-2S] binding domain 422 469 5.1E-9 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 Gene3D G3DSA:1.10.10.1100 421 475 4.7E-10 T 13-10-2018 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 Gene3D G3DSA:3.30.413.10 629 798 4.3E-35 T 13-10-2018 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 SUPERFAMILY SSF51905 150 306 1.3E-22 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 7 799 0.0 T 13-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 Gene3D G3DSA:3.50.50.60 8 282 1.3E-77 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 SUPERFAMILY SSF55124 500 639 4.91E-27 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 9.4E-13 T 13-10-2018 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 9.4E-13 T 13-10-2018 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 9.4E-13 T 13-10-2018 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 9.4E-13 T 13-10-2018 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 9.4E-13 T 13-10-2018 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 677 693 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_13120 cac9b72b4d2caae9bd58c2da04772ada 843 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 285 5.3E-45 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_15850 74c041448ae8856a9f3df8330cc0f4c0 188 Pfam PF03641 Possible lysine decarboxylase 45 173 3.2E-44 T 13-10-2018 IPR031100 LOG family P40_15850 74c041448ae8856a9f3df8330cc0f4c0 188 SUPERFAMILY SSF102405 1 178 5.65E-64 T 13-10-2018 P40_15850 74c041448ae8856a9f3df8330cc0f4c0 188 Gene3D G3DSA:3.40.50.450 1 188 3.2E-80 T 13-10-2018 P40_15850 74c041448ae8856a9f3df8330cc0f4c0 188 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 178 3.1E-62 T 13-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG P40_21420 e81191c4a2a1eaf21447028a9e510aa0 324 SUPERFAMILY SSF50129 1 140 6.6E-40 T 13-10-2018 IPR011032 GroES-like superfamily P40_21420 e81191c4a2a1eaf21447028a9e510aa0 324 SUPERFAMILY SSF51735 111 277 2.42E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_21420 e81191c4a2a1eaf21447028a9e510aa0 324 Gene3D G3DSA:3.40.50.720 123 266 1.1E-101 T 13-10-2018 P40_21420 e81191c4a2a1eaf21447028a9e510aa0 324 SMART SM00829 10 321 4.1E-47 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P40_21420 e81191c4a2a1eaf21447028a9e510aa0 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 6.3E-11 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P40_21420 e81191c4a2a1eaf21447028a9e510aa0 324 Gene3D G3DSA:3.90.180.10 13 317 1.1E-101 T 13-10-2018 P40_21420 e81191c4a2a1eaf21447028a9e510aa0 324 Pfam PF00107 Zinc-binding dehydrogenase 151 278 9.5E-27 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 P40_04090 f8e34c610dfa656cbe9512deca635a13 78 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 7 67 15.483 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 P40_04090 f8e34c610dfa656cbe9512deca635a13 78 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 63 2.9E-20 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 P40_04090 f8e34c610dfa656cbe9512deca635a13 78 PIRSF PIRSF006488 1 77 2.9E-22 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 P40_04090 f8e34c610dfa656cbe9512deca635a13 78 Gene3D G3DSA:1.10.287.1040 2 76 9.5E-24 T 13-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 P40_04090 f8e34c610dfa656cbe9512deca635a13 78 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 3 47 6.0E-9 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 P40_04090 f8e34c610dfa656cbe9512deca635a13 78 SUPERFAMILY SSF116842 7 67 1.06E-19 T 13-10-2018 P40_04090 f8e34c610dfa656cbe9512deca635a13 78 Pfam PF02609 Exonuclease VII small subunit 9 59 5.4E-19 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 P40_07415 93434d16b6594304ff6d85dbdc7282fa 308 Gene3D G3DSA:3.40.190.10 163 265 1.6E-63 T 13-10-2018 P40_07415 93434d16b6594304ff6d85dbdc7282fa 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 7.0E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_07415 93434d16b6594304ff6d85dbdc7282fa 308 Gene3D G3DSA:1.10.10.10 3 89 6.7E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_07415 93434d16b6594304ff6d85dbdc7282fa 308 Pfam PF03466 LysR substrate binding domain 90 292 7.2E-41 T 13-10-2018 IPR005119 LysR, substrate-binding P40_07415 93434d16b6594304ff6d85dbdc7282fa 308 SUPERFAMILY SSF53850 89 296 1.47E-43 T 13-10-2018 P40_07415 93434d16b6594304ff6d85dbdc7282fa 308 SUPERFAMILY SSF46785 3 111 9.75E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_07415 93434d16b6594304ff6d85dbdc7282fa 308 Gene3D G3DSA:3.40.190.10 92 290 1.6E-63 T 13-10-2018 P40_01195 f0995f0d24b726791088c4af02866c70 93 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 93 25.764 T 13-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 P40_01195 f0995f0d24b726791088c4af02866c70 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 1.5E-37 T 13-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 P40_01195 f0995f0d24b726791088c4af02866c70 93 SUPERFAMILY SSF51182 1 92 2.23E-36 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_01195 f0995f0d24b726791088c4af02866c70 93 Gene3D G3DSA:2.60.120.10 1 92 5.3E-35 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_13575 3fb130ca15673dc7decbb05c1a419f6a 218 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P40_13575 3fb130ca15673dc7decbb05c1a419f6a 218 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 192 1.5E-72 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 P40_13575 3fb130ca15673dc7decbb05c1a419f6a 218 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 189 31.779 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 P40_13575 3fb130ca15673dc7decbb05c1a419f6a 218 Gene3D G3DSA:3.40.50.170 4 213 2.7E-81 T 13-10-2018 P40_13575 3fb130ca15673dc7decbb05c1a419f6a 218 Pfam PF00551 Formyl transferase 4 183 5.4E-61 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P40_13575 3fb130ca15673dc7decbb05c1a419f6a 218 SUPERFAMILY SSF53328 4 205 1.57E-65 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P40_01830 74b1105d582eb184d593b3b4e41d3d2f 389 Gene3D G3DSA:3.40.190.10 42 328 2.0E-32 T 13-10-2018 P40_01830 74b1105d582eb184d593b3b4e41d3d2f 389 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 18 328 2.9E-45 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_01830 74b1105d582eb184d593b3b4e41d3d2f 389 SUPERFAMILY SSF53850 34 330 1.33E-37 T 13-10-2018 P40_01830 74b1105d582eb184d593b3b4e41d3d2f 389 Pfam PF16868 NMT1-like family 44 328 3.3E-8 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_01830 74b1105d582eb184d593b3b4e41d3d2f 389 Gene3D G3DSA:3.40.190.10 123 266 2.0E-32 T 13-10-2018 P40_09280 61d883a4783ce59e21c00b5e3e63556d 219 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 142 157 - T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 P40_09280 61d883a4783ce59e21c00b5e3e63556d 219 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 11 218 35.197 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 P40_09280 61d883a4783ce59e21c00b5e3e63556d 219 SUPERFAMILY SSF53335 14 217 1.48E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_09280 61d883a4783ce59e21c00b5e3e63556d 219 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 12 218 1.9E-66 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 P40_09280 61d883a4783ce59e21c00b5e3e63556d 219 Gene3D G3DSA:3.40.50.150 7 219 2.2E-72 T 13-10-2018 P40_09280 61d883a4783ce59e21c00b5e3e63556d 219 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 16 215 1.1E-60 T 13-10-2018 P40_02510 78c5634278a7fbc96690ca496644396c 317 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 260 305 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 P40_02510 78c5634278a7fbc96690ca496644396c 317 SMART SM00342 224 309 4.4E-27 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_02510 78c5634278a7fbc96690ca496644396c 317 Pfam PF12833 Helix-turn-helix domain 230 309 3.9E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_02510 78c5634278a7fbc96690ca496644396c 317 SUPERFAMILY SSF46689 265 311 2.33E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_02510 78c5634278a7fbc96690ca496644396c 317 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 278 293 6.4E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_02510 78c5634278a7fbc96690ca496644396c 317 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 293 309 6.4E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_02510 78c5634278a7fbc96690ca496644396c 317 Gene3D G3DSA:1.10.10.60 208 316 8.4E-26 T 13-10-2018 P40_02510 78c5634278a7fbc96690ca496644396c 317 Pfam PF14525 AraC-binding-like domain 22 192 2.0E-21 T 13-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like P40_07615 b172b940dd4d72ecdd51b2505de98022 361 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 117 1.4E-19 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_07615 b172b940dd4d72ecdd51b2505de98022 361 SUPERFAMILY SSF56645 2 204 1.96E-32 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_07615 b172b940dd4d72ecdd51b2505de98022 361 SUPERFAMILY SSF47203 211 355 3.06E-31 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_07615 b172b940dd4d72ecdd51b2505de98022 361 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 211 340 1.3E-22 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_07615 b172b940dd4d72ecdd51b2505de98022 361 Gene3D G3DSA:1.20.140.10 215 354 2.3E-26 T 13-10-2018 P40_07615 b172b940dd4d72ecdd51b2505de98022 361 Gene3D G3DSA:1.10.540.10 1 119 6.3E-29 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_07615 b172b940dd4d72ecdd51b2505de98022 361 Gene3D G3DSA:2.40.110.10 120 214 1.0E-14 T 13-10-2018 P40_18525 0c6bbe808966688d77b1e4c1c257aa65 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 214 229 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 P40_18525 0c6bbe808966688d77b1e4c1c257aa65 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 341 350 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site P40_18525 0c6bbe808966688d77b1e4c1c257aa65 444 SUPERFAMILY SSF52540 137 369 7.68E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18525 0c6bbe808966688d77b1e4c1c257aa65 444 PRINTS PR00819 CbxX/CfqX superfamily signature 344 356 9.7E-5 T 13-10-2018 IPR000641 CbxX/CfqX GO:0005524 P40_18525 0c6bbe808966688d77b1e4c1c257aa65 444 PRINTS PR00819 CbxX/CfqX superfamily signature 160 175 9.7E-5 T 13-10-2018 IPR000641 CbxX/CfqX GO:0005524 P40_18525 0c6bbe808966688d77b1e4c1c257aa65 444 PRINTS PR00819 CbxX/CfqX superfamily signature 211 230 9.7E-5 T 13-10-2018 IPR000641 CbxX/CfqX GO:0005524 P40_18525 0c6bbe808966688d77b1e4c1c257aa65 444 Pfam PF00158 Sigma-54 interaction domain 137 294 1.5E-45 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 P40_18525 0c6bbe808966688d77b1e4c1c257aa65 444 Gene3D G3DSA:3.40.50.2300 1 132 3.1E-30 T 13-10-2018 P40_18525 0c6bbe808966688d77b1e4c1c257aa65 444 Pfam PF00072 Response regulator receiver domain 4 108 1.2E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_18525 0c6bbe808966688d77b1e4c1c257aa65 444 SMART SM00448 2 108 5.9E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_18525 0c6bbe808966688d77b1e4c1c257aa65 444 Gene3D G3DSA:1.10.8.60 299 366 1.8E-22 T 13-10-2018 P40_18525 0c6bbe808966688d77b1e4c1c257aa65 444 Gene3D G3DSA:3.40.50.300 133 298 6.0E-49 T 13-10-2018 P40_18525 0c6bbe808966688d77b1e4c1c257aa65 444 SMART SM00382 157 291 1.8E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_18525 0c6bbe808966688d77b1e4c1c257aa65 444 SUPERFAMILY SSF52172 2 182 3.7E-37 T 13-10-2018 IPR011006 CheY-like superfamily P40_17830 2d5ea446a8d666442a132c631bb02cf7 323 SMART SM00363 22 82 7.4E-4 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_17830 2d5ea446a8d666442a132c631bb02cf7 323 Pfam PF01479 S4 domain 23 66 1.1E-7 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_17830 2d5ea446a8d666442a132c631bb02cf7 323 Gene3D G3DSA:3.30.2350.10 88 320 6.2E-74 T 13-10-2018 P40_17830 2d5ea446a8d666442a132c631bb02cf7 323 Pfam PF00849 RNA pseudouridylate synthase 95 246 6.2E-32 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_17830 2d5ea446a8d666442a132c631bb02cf7 323 SUPERFAMILY SSF55120 80 317 1.19E-78 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_17830 2d5ea446a8d666442a132c631bb02cf7 323 Gene3D G3DSA:3.10.290.10 6 78 1.1E-19 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 P40_17830 2d5ea446a8d666442a132c631bb02cf7 323 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 316 2.4E-94 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_17830 2d5ea446a8d666442a132c631bb02cf7 323 SUPERFAMILY SSF55174 22 71 2.52E-7 T 13-10-2018 P40_17830 2d5ea446a8d666442a132c631bb02cf7 323 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 138 152 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_12420 c4df0f9e1c1f78836369dd2cd2deb351 253 SMART SM00345 15 74 5.4E-27 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_12420 c4df0f9e1c1f78836369dd2cd2deb351 253 Gene3D G3DSA:1.10.10.10 1 74 3.0E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_12420 c4df0f9e1c1f78836369dd2cd2deb351 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.0E-10 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_12420 c4df0f9e1c1f78836369dd2cd2deb351 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.0E-10 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_12420 c4df0f9e1c1f78836369dd2cd2deb351 253 Gene3D G3DSA:1.20.120.530 96 250 8.1E-27 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_12420 c4df0f9e1c1f78836369dd2cd2deb351 253 SMART SM00895 99 230 1.7E-19 T 13-10-2018 IPR011711 GntR, C-terminal P40_12420 c4df0f9e1c1f78836369dd2cd2deb351 253 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 2.3E-24 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_12420 c4df0f9e1c1f78836369dd2cd2deb351 253 SUPERFAMILY SSF46785 6 77 1.47E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_12420 c4df0f9e1c1f78836369dd2cd2deb351 253 Pfam PF07729 FCD domain 99 228 1.3E-22 T 13-10-2018 IPR011711 GntR, C-terminal P40_12420 c4df0f9e1c1f78836369dd2cd2deb351 253 SUPERFAMILY SSF48008 98 235 3.66E-23 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_00020 1eb3472886d7bb67927322c65c98b418 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 172 8.6E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_00020 1eb3472886d7bb67927322c65c98b418 804 Gene3D G3DSA:3.30.230.10 220 398 8.5E-72 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P40_00020 1eb3472886d7bb67927322c65c98b418 804 SUPERFAMILY SSF55874 6 218 1.44E-74 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_00020 1eb3472886d7bb67927322c65c98b418 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 732 793 1.2E-30 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 P40_00020 1eb3472886d7bb67927322c65c98b418 804 SMART SM00433 36 797 3.1E-279 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P40_00020 1eb3472886d7bb67927322c65c98b418 804 Gene3D G3DSA:3.30.565.10 2 219 5.8E-94 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR01159 DNA gyrase subunit B signature 6 16 2.6E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 2.6E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 2.6E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 2.6E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 2.6E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 2.6E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 2.6E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 2.6E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 2.6E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 2.6E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P40_00020 1eb3472886d7bb67927322c65c98b418 804 Gene3D G3DSA:3.40.50.670 705 803 1.3E-26 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P40_00020 1eb3472886d7bb67927322c65c98b418 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 804 101.563 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_00020 1eb3472886d7bb67927322c65c98b418 804 SMART SM00387 32 176 5.3E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_00020 1eb3472886d7bb67927322c65c98b418 804 SUPERFAMILY SSF56719 394 794 7.32E-89 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 P40_00020 1eb3472886d7bb67927322c65c98b418 804 Pfam PF01751 Toprim domain 419 531 8.1E-18 T 13-10-2018 IPR006171 TOPRIM domain P40_00020 1eb3472886d7bb67927322c65c98b418 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P40_00020 1eb3472886d7bb67927322c65c98b418 804 Gene3D G3DSA:3.40.50.670 399 567 1.3E-75 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P40_00020 1eb3472886d7bb67927322c65c98b418 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 804 0.0 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_00020 1eb3472886d7bb67927322c65c98b418 804 SUPERFAMILY SSF54211 221 392 1.52E-58 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_00020 1eb3472886d7bb67927322c65c98b418 804 Gene3D G3DSA:3.10.20.690 592 683 4.4E-23 T 13-10-2018 P40_00020 1eb3472886d7bb67927322c65c98b418 804 Pfam PF00204 DNA gyrase B 221 390 3.1E-60 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR00418 DNA topoisomerase II family signature 71 84 2.2E-71 T 13-10-2018 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 2.2E-71 T 13-10-2018 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 2.2E-71 T 13-10-2018 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 2.2E-71 T 13-10-2018 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 2.2E-71 T 13-10-2018 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR00418 DNA topoisomerase II family signature 114 128 2.2E-71 T 13-10-2018 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 2.2E-71 T 13-10-2018 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 2.2E-71 T 13-10-2018 P40_00020 1eb3472886d7bb67927322c65c98b418 804 PRINTS PR00418 DNA topoisomerase II family signature 36 51 2.2E-71 T 13-10-2018 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Gene3D G3DSA:2.40.50.100 949 1022 7.9E-25 T 13-10-2018 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Gene3D G3DSA:3.90.105.10 833 885 1.4E-5 T 13-10-2018 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 SMART SM00663 235 514 5.9E-183 T 13-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Gene3D G3DSA:1.10.150.390 1316 1376 1.9E-27 T 13-10-2018 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Gene3D G3DSA:1.10.132.30 641 790 1.2E-66 T 13-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Gene3D G3DSA:2.40.50.100 1023 1126 7.9E-26 T 13-10-2018 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.0E-26 T 13-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 342 1.0E-86 T 13-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Gene3D G3DSA:2.40.50.100 1151 1215 2.3E-60 T 13-10-2018 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Gene3D G3DSA:1.10.1790.20 1135 1314 2.3E-60 T 13-10-2018 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 SUPERFAMILY SSF64484 15 1364 0.0 T 13-10-2018 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 6.9E-77 T 13-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Gene3D G3DSA:1.10.40.90 374 416 2.5E-21 T 13-10-2018 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 391 485 1.0E-26 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 385 8.7E-8 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 14 1377 18.858 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Gene3D G3DSA:1.10.274.100 490 640 6.0E-37 T 13-10-2018 P40_18285 a34750c7d54d93bf202efa62e6e54f5b 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.5E-20 T 13-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_20300 8a34c50220046bb12317edd19d80960f 286 Gene3D G3DSA:3.40.50.150 59 285 3.7E-66 T 13-10-2018 P40_20300 8a34c50220046bb12317edd19d80960f 286 Gene3D G3DSA:2.30.140.10 5 58 1.4E-14 T 13-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 P40_20300 8a34c50220046bb12317edd19d80960f 286 Pfam PF17284 Spermidine synthase tetramerisation domain 8 58 5.7E-9 T 13-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 P40_20300 8a34c50220046bb12317edd19d80960f 286 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 7 285 36.066 T 13-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 P40_20300 8a34c50220046bb12317edd19d80960f 286 SUPERFAMILY SSF53335 8 283 7.82E-75 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_20300 8a34c50220046bb12317edd19d80960f 286 Pfam PF01564 Spermine/spermidine synthase domain 64 243 4.5E-53 T 13-10-2018 P40_20300 8a34c50220046bb12317edd19d80960f 286 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 84 97 - T 13-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 P40_20300 8a34c50220046bb12317edd19d80960f 286 TIGRFAM TIGR00417 speE: spermidine synthase 8 279 6.1E-82 T 13-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 P40_14205 19b15d19175a200fee4494e820322398 551 SUPERFAMILY SSF90123 7 327 1.83E-37 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 P40_14205 19b15d19175a200fee4494e820322398 551 Gene3D G3DSA:1.20.1560.10 9 324 9.2E-21 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 P40_14205 19b15d19175a200fee4494e820322398 551 Pfam PF00005 ABC transporter 361 506 5.1E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_14205 19b15d19175a200fee4494e820322398 551 SMART SM00382 368 544 1.2E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_14205 19b15d19175a200fee4494e820322398 551 Gene3D G3DSA:3.40.50.300 337 551 3.2E-59 T 13-10-2018 P40_14205 19b15d19175a200fee4494e820322398 551 Pfam PF00664 ABC transporter transmembrane region 59 284 3.0E-13 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 P40_14205 19b15d19175a200fee4494e820322398 551 SUPERFAMILY SSF52540 337 550 1.33E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_14205 19b15d19175a200fee4494e820322398 551 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 536 2.5E-117 T 13-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 P40_00540 7f05dba14ff41e9800594afef61981fe 421 Pfam PF01593 Flavin containing amine oxidoreductase 12 285 8.7E-20 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 P40_00540 7f05dba14ff41e9800594afef61981fe 421 Gene3D G3DSA:3.50.50.60 1 401 9.8E-22 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_00540 7f05dba14ff41e9800594afef61981fe 421 SUPERFAMILY SSF51905 5 414 8.09E-50 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_14510 e067de6993cbe000154ffc1c3b1be020 219 SUPERFAMILY SSF53448 24 216 1.75E-31 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_14510 e067de6993cbe000154ffc1c3b1be020 219 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 62 177 1.6E-28 T 13-10-2018 IPR018641 Transferase 1, rSAM/selenodomain-associated P40_14510 e067de6993cbe000154ffc1c3b1be020 219 Gene3D G3DSA:3.90.550.10 18 215 1.3E-58 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_14510 e067de6993cbe000154ffc1c3b1be020 219 TIGRFAM TIGR04282 glyco_like_cofC: transferase 1, rSAM/selenodomain-associated 22 209 5.9E-50 T 13-10-2018 IPR018641 Transferase 1, rSAM/selenodomain-associated P40_14545 504c628001e83b7685d8f1b393a33165 451 Gene3D G3DSA:3.20.20.70 55 386 1.4E-74 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_14545 504c628001e83b7685d8f1b393a33165 451 SUPERFAMILY SSF102114 161 377 1.96E-10 T 13-10-2018 P40_14615 325c9fb50a4c0b76e4fbd7523d55c522 682 SUPERFAMILY SSF52540 212 421 4.5E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_14615 325c9fb50a4c0b76e4fbd7523d55c522 682 SUPERFAMILY SSF54211 499 681 2.28E-23 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_14615 325c9fb50a4c0b76e4fbd7523d55c522 682 TIGRFAM TIGR02653 Lon_rel_chp: conserved hypothetical protein 9 681 0.0 T 13-10-2018 IPR013473 Conserved hypothetical protein CHP02653, peptidase S16 non-peptidase homologue P40_14615 325c9fb50a4c0b76e4fbd7523d55c522 682 Pfam PF13337 Putative ATP-dependent Lon protease 17 471 1.5E-212 T 13-10-2018 IPR014061 Conserved hypothetical protein CHP02688 P40_14615 325c9fb50a4c0b76e4fbd7523d55c522 682 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 499 677 4.0E-15 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 P40_14615 325c9fb50a4c0b76e4fbd7523d55c522 682 TIGRFAM TIGR02688 TIGR02688: TIGR02688 family protein 16 462 1.5E-190 T 13-10-2018 IPR014061 Conserved hypothetical protein CHP02688 P40_14615 325c9fb50a4c0b76e4fbd7523d55c522 682 Gene3D G3DSA:3.30.230.10 500 681 5.8E-23 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P40_14615 325c9fb50a4c0b76e4fbd7523d55c522 682 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 634 652 3.2E-6 T 13-10-2018 P40_14615 325c9fb50a4c0b76e4fbd7523d55c522 682 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 611 630 3.2E-6 T 13-10-2018 P40_14615 325c9fb50a4c0b76e4fbd7523d55c522 682 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 230 249 3.2E-6 T 13-10-2018 P40_05755 3aea2631ecaa7d92da6d29d22baf0cf8 489 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 488 84.732 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 P40_05755 3aea2631ecaa7d92da6d29d22baf0cf8 489 PIRSF PIRSF000130 1 489 1.3E-203 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 P40_05755 3aea2631ecaa7d92da6d29d22baf0cf8 489 SMART SM01240 7 475 0.0 T 13-10-2018 P40_05755 3aea2631ecaa7d92da6d29d22baf0cf8 489 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 P40_05755 3aea2631ecaa7d92da6d29d22baf0cf8 489 SUPERFAMILY SSF54631 95 203 1.9E-28 T 13-10-2018 P40_05755 3aea2631ecaa7d92da6d29d22baf0cf8 489 SUPERFAMILY SSF51412 1 479 6.8E-123 T 13-10-2018 P40_05755 3aea2631ecaa7d92da6d29d22baf0cf8 489 Gene3D G3DSA:3.20.20.70 1 488 1.8E-211 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_05755 3aea2631ecaa7d92da6d29d22baf0cf8 489 SMART SM00116 96 143 2.1E-9 T 13-10-2018 IPR000644 CBS domain P40_05755 3aea2631ecaa7d92da6d29d22baf0cf8 489 SMART SM00116 157 205 6.3E-6 T 13-10-2018 IPR000644 CBS domain P40_05755 3aea2631ecaa7d92da6d29d22baf0cf8 489 Pfam PF00571 CBS domain 95 137 4.3E-10 T 13-10-2018 IPR000644 CBS domain P40_05755 3aea2631ecaa7d92da6d29d22baf0cf8 489 Pfam PF00571 CBS domain 148 200 3.7E-7 T 13-10-2018 IPR000644 CBS domain P40_05755 3aea2631ecaa7d92da6d29d22baf0cf8 489 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 1.5E-190 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 P40_05755 3aea2631ecaa7d92da6d29d22baf0cf8 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 475 2.4E-162 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 P40_19610 d7d275110b2526a8dc0d1a231d919b34 705 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 77 705 5.3E-86 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 P40_19610 d7d275110b2526a8dc0d1a231d919b34 705 SUPERFAMILY SSF56935 32 705 6.41E-121 T 13-10-2018 P40_19610 d7d275110b2526a8dc0d1a231d919b34 705 Pfam PF00593 TonB dependent receptor 258 703 8.1E-43 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_19610 d7d275110b2526a8dc0d1a231d919b34 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 173 3.5E-18 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_19610 d7d275110b2526a8dc0d1a231d919b34 705 Gene3D G3DSA:2.40.170.20 184 705 1.8E-119 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_19610 d7d275110b2526a8dc0d1a231d919b34 705 Gene3D G3DSA:2.170.130.10 56 183 8.9E-29 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_02735 a6469f7e5ee7885522bafba23f414cff 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 256 2.8E-117 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 P40_02735 a6469f7e5ee7885522bafba23f414cff 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 50.039 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 P40_02735 a6469f7e5ee7885522bafba23f414cff 257 Pfam PF00977 Histidine biosynthesis protein 6 239 1.2E-93 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 P40_02735 a6469f7e5ee7885522bafba23f414cff 257 SUPERFAMILY SSF51366 3 256 4.47E-90 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 P40_02735 a6469f7e5ee7885522bafba23f414cff 257 Gene3D G3DSA:3.20.20.70 1 257 4.1E-116 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_15185 f59f72adc4cbe19088bfd2e2240c04cf 220 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 62 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site P40_15185 f59f72adc4cbe19088bfd2e2240c04cf 220 SUPERFAMILY SSF46689 10 84 1.85E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_15185 f59f72adc4cbe19088bfd2e2240c04cf 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.1E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_15185 f59f72adc4cbe19088bfd2e2240c04cf 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.1E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_15185 f59f72adc4cbe19088bfd2e2240c04cf 220 Gene3D G3DSA:1.10.357.10 10 212 9.3E-33 T 13-10-2018 P40_15185 f59f72adc4cbe19088bfd2e2240c04cf 220 SUPERFAMILY SSF48498 88 196 4.13E-7 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_15185 f59f72adc4cbe19088bfd2e2240c04cf 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 6.2E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_08310 35ebcf8ff67b85df5d356368e847ae3f 463 Gene3D G3DSA:3.90.1150.10 108 450 2.4E-82 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_08310 35ebcf8ff67b85df5d356368e847ae3f 463 Gene3D G3DSA:3.40.640.10 144 360 2.4E-82 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_08310 35ebcf8ff67b85df5d356368e847ae3f 463 Gene3D G3DSA:1.10.10.10 10 106 8.6E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_08310 35ebcf8ff67b85df5d356368e847ae3f 463 SUPERFAMILY SSF53383 104 451 7.66E-82 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_08310 35ebcf8ff67b85df5d356368e847ae3f 463 SMART SM00345 17 76 4.2E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_08310 35ebcf8ff67b85df5d356368e847ae3f 463 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 5.8E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_08310 35ebcf8ff67b85df5d356368e847ae3f 463 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 5.8E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_08310 35ebcf8ff67b85df5d356368e847ae3f 463 SUPERFAMILY SSF46785 5 80 1.26E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_08310 35ebcf8ff67b85df5d356368e847ae3f 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 2.1E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_08310 35ebcf8ff67b85df5d356368e847ae3f 463 Pfam PF00155 Aminotransferase class I and II 128 447 5.4E-33 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_06980 85d81cb840354932a30a700d69fb2b78 150 SUPERFAMILY SSF55961 2 144 2.5E-42 T 13-10-2018 P40_06980 85d81cb840354932a30a700d69fb2b78 150 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 15 142 4.5E-28 T 13-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like P40_06980 85d81cb840354932a30a700d69fb2b78 150 Gene3D G3DSA:3.30.530.20 3 146 1.3E-40 T 13-10-2018 IPR023393 START-like domain superfamily P40_06120 9c3596947c74a460fd8129e48875141f 258 Pfam PF10127 Predicted nucleotidyltransferase 7 254 2.8E-89 T 13-10-2018 IPR018775 Nucleotidyltransferase, predicted P40_06120 9c3596947c74a460fd8129e48875141f 258 SUPERFAMILY SSF81301 7 64 8.59E-5 T 13-10-2018 P40_05065 418418d7023a52aeb7457e20ba838452 334 Pfam PF04055 Radical SAM superfamily 95 256 5.1E-16 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P40_05065 418418d7023a52aeb7457e20ba838452 334 SUPERFAMILY SSF102114 56 318 1.19E-66 T 13-10-2018 P40_05065 418418d7023a52aeb7457e20ba838452 334 TIGRFAM TIGR00510 lipA: lipoyl synthase 36 323 2.1E-129 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 P40_05065 418418d7023a52aeb7457e20ba838452 334 SMART SM00729 88 297 3.0E-20 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 P40_05065 418418d7023a52aeb7457e20ba838452 334 Hamap MF_00206 Lipoyl synthase [lipA]. 1 328 149.206 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 P40_05065 418418d7023a52aeb7457e20ba838452 334 PIRSF PIRSF005963 2 328 8.2E-131 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 P40_05065 418418d7023a52aeb7457e20ba838452 334 Gene3D G3DSA:3.20.20.70 88 306 1.4E-24 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_05065 418418d7023a52aeb7457e20ba838452 334 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 38 77 1.2E-8 T 13-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 P40_02230 69081bdd0ead44b24af78b0375f20c05 382 PIRSF PIRSF016578 2 86 5.3E-4 T 13-10-2018 P40_02230 69081bdd0ead44b24af78b0375f20c05 382 PIRSF PIRSF016578 239 378 1.5E-5 T 13-10-2018 P40_02230 69081bdd0ead44b24af78b0375f20c05 382 PIRSF PIRSF016578 134 197 2.4 T 13-10-2018 P40_02230 69081bdd0ead44b24af78b0375f20c05 382 SUPERFAMILY SSF56645 7 245 1.2E-82 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_02230 69081bdd0ead44b24af78b0375f20c05 382 Gene3D G3DSA:2.40.110.10 125 237 6.1E-44 T 13-10-2018 P40_02230 69081bdd0ead44b24af78b0375f20c05 382 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 128 140 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_02230 69081bdd0ead44b24af78b0375f20c05 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 2.5E-42 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_02230 69081bdd0ead44b24af78b0375f20c05 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 220 2.6E-27 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_02230 69081bdd0ead44b24af78b0375f20c05 382 SUPERFAMILY SSF47203 230 380 9.99E-40 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_02230 69081bdd0ead44b24af78b0375f20c05 382 Gene3D G3DSA:1.20.140.10 238 382 9.5E-43 T 13-10-2018 P40_02230 69081bdd0ead44b24af78b0375f20c05 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 122 5.1E-31 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_02230 69081bdd0ead44b24af78b0375f20c05 382 Gene3D G3DSA:1.10.540.10 7 124 2.0E-38 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_08605 1e2a35e9e7d7ff4f3cc70579eb9f254c 92 Pfam PF07023 Protein of unknown function (DUF1315) 7 78 2.8E-29 T 13-10-2018 IPR009749 Protein of unknown function DUF1315 P40_21615 e0596ced9574629548729155a7f3d8b8 604 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 478 594 2.1E-27 T 13-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain P40_21615 e0596ced9574629548729155a7f3d8b8 604 Gene3D G3DSA:2.40.110.10 161 283 1.5E-29 T 13-10-2018 P40_21615 e0596ced9574629548729155a7f3d8b8 604 Gene3D G3DSA:1.10.540.10 11 159 3.9E-19 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_21615 e0596ced9574629548729155a7f3d8b8 604 Gene3D G3DSA:1.20.140.10 284 456 2.5E-44 T 13-10-2018 P40_21615 e0596ced9574629548729155a7f3d8b8 604 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 269 1.0E-19 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_21615 e0596ced9574629548729155a7f3d8b8 604 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 279 451 9.4E-22 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_21615 e0596ced9574629548729155a7f3d8b8 604 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 157 1.2E-15 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_21615 e0596ced9574629548729155a7f3d8b8 604 SUPERFAMILY SSF56645 37 275 5.89E-61 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_21615 e0596ced9574629548729155a7f3d8b8 604 SUPERFAMILY SSF47203 284 459 1.35E-45 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_21615 e0596ced9574629548729155a7f3d8b8 604 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 2.7E-10 T 13-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria P40_18765 18b05f18f0bbc803c113f6feee17f35c 556 SUPERFAMILY SSF52540 1 217 1.26E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18765 18b05f18f0bbc803c113f6feee17f35c 556 Gene3D G3DSA:3.40.50.300 1 203 2.1E-43 T 13-10-2018 P40_18765 18b05f18f0bbc803c113f6feee17f35c 556 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 509 2.0E-21 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal P40_18765 18b05f18f0bbc803c113f6feee17f35c 556 SUPERFAMILY SSF52540 3 503 9.19E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18765 18b05f18f0bbc803c113f6feee17f35c 556 PIRSF PIRSF003128 1 555 2.7E-172 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 P40_18765 18b05f18f0bbc803c113f6feee17f35c 556 Gene3D G3DSA:3.40.50.300 285 551 1.7E-53 T 13-10-2018 P40_18765 18b05f18f0bbc803c113f6feee17f35c 556 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 1.2E-167 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 P40_04000 f01b981dc6944ae506d730e1c72bc868 402 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 P40_04000 f01b981dc6944ae506d730e1c72bc868 402 Pfam PF00108 Thiolase, N-terminal domain 6 268 2.4E-74 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 P40_04000 f01b981dc6944ae506d730e1c72bc868 402 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 402 8.7E-214 T 13-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 P40_04000 f01b981dc6944ae506d730e1c72bc868 402 Gene3D G3DSA:3.40.47.10 6 283 6.6E-155 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_04000 f01b981dc6944ae506d730e1c72bc868 402 Pfam PF02803 Thiolase, C-terminal domain 277 401 3.8E-46 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_04000 f01b981dc6944ae506d730e1c72bc868 402 SUPERFAMILY SSF53901 4 275 8.89E-77 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_04000 f01b981dc6944ae506d730e1c72bc868 402 PIRSF PIRSF000429 1 402 1.5E-132 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_04000 f01b981dc6944ae506d730e1c72bc868 402 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 P40_04000 f01b981dc6944ae506d730e1c72bc868 402 Gene3D G3DSA:3.40.47.10 141 399 6.6E-155 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_04000 f01b981dc6944ae506d730e1c72bc868 402 SUPERFAMILY SSF53901 278 401 5.76E-46 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_04000 f01b981dc6944ae506d730e1c72bc868 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 P40_04000 f01b981dc6944ae506d730e1c72bc868 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 400 4.1E-135 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_11030 2b75ecdf77148c17d6f076f237ff4201 211 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 5 190 3.9E-75 T 13-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO P40_11030 2b75ecdf77148c17d6f076f237ff4201 211 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 5 179 1.0E-75 T 13-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO P40_11030 2b75ecdf77148c17d6f076f237ff4201 211 SUPERFAMILY SSF46626 16 203 6.35E-26 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_11030 2b75ecdf77148c17d6f076f237ff4201 211 Gene3D G3DSA:1.10.760.10 42 210 1.3E-61 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_10945 a7b50c6b1b5228dd39c625218f2cf911 703 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 545 691 3.4E-39 T 13-10-2018 IPR020992 Tail specific protease, C-terminal P40_10945 a7b50c6b1b5228dd39c625218f2cf911 703 SUPERFAMILY SSF52096 198 546 1.47E-67 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_10945 a7b50c6b1b5228dd39c625218f2cf911 703 Gene3D G3DSA:3.90.226.10 331 557 1.2E-63 T 13-10-2018 P40_10945 a7b50c6b1b5228dd39c625218f2cf911 703 Gene3D G3DSA:2.30.42.10 239 325 1.1E-13 T 13-10-2018 P40_10945 a7b50c6b1b5228dd39c625218f2cf911 703 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 205 562 5.6E-92 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 P40_10945 a7b50c6b1b5228dd39c625218f2cf911 703 SMART SM00245 333 542 2.9E-54 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 P40_10945 a7b50c6b1b5228dd39c625218f2cf911 703 SUPERFAMILY SSF50156 240 327 2.25E-13 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 P40_10945 a7b50c6b1b5228dd39c625218f2cf911 703 SMART SM00228 250 328 5.5E-10 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_10945 a7b50c6b1b5228dd39c625218f2cf911 703 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 243 324 4.9E-13 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_10945 a7b50c6b1b5228dd39c625218f2cf911 703 Pfam PF03572 Peptidase family S41 367 539 3.1E-48 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 P40_06565 52370a343d6981da50d012baf7da8e4d 476 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 440 34.178 T 13-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 P40_06565 52370a343d6981da50d012baf7da8e4d 476 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 2.7E-74 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P40_06565 52370a343d6981da50d012baf7da8e4d 476 Gene3D G3DSA:1.10.260.30 309 445 3.9E-37 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 P40_06565 52370a343d6981da50d012baf7da8e4d 476 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.5E-176 T 13-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 P40_06565 52370a343d6981da50d012baf7da8e4d 476 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P40_06565 52370a343d6981da50d012baf7da8e4d 476 SUPERFAMILY SSF52540 42 352 5.31E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_06565 52370a343d6981da50d012baf7da8e4d 476 SMART SM00963 1 86 7.7E-36 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P40_06565 52370a343d6981da50d012baf7da8e4d 476 Pfam PF02978 Signal peptide binding domain 329 427 1.3E-30 T 13-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 P40_06565 52370a343d6981da50d012baf7da8e4d 476 SUPERFAMILY SSF47446 298 430 1.02E-41 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 P40_06565 52370a343d6981da50d012baf7da8e4d 476 SMART SM00962 100 296 1.3E-114 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P40_06565 52370a343d6981da50d012baf7da8e4d 476 SMART SM00382 99 301 4.5E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_06565 52370a343d6981da50d012baf7da8e4d 476 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 7.5E-22 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P40_06565 52370a343d6981da50d012baf7da8e4d 476 Gene3D G3DSA:3.40.50.300 90 285 2.2E-124 T 13-10-2018 P40_06565 52370a343d6981da50d012baf7da8e4d 476 Gene3D G3DSA:1.20.120.140 4 305 2.2E-124 T 13-10-2018 P40_00105 9e57d89f970a6ed587d676ca87b7bec1 623 Pfam PF07690 Major Facilitator Superfamily 52 383 2.0E-14 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_00105 9e57d89f970a6ed587d676ca87b7bec1 623 SUPERFAMILY SSF69593 412 611 1.09E-34 T 13-10-2018 P40_00105 9e57d89f970a6ed587d676ca87b7bec1 623 SUPERFAMILY SSF103473 20 423 1.96E-22 T 13-10-2018 IPR036259 MFS transporter superfamily P40_00105 9e57d89f970a6ed587d676ca87b7bec1 623 SMART SM00563 454 570 2.1E-29 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_00105 9e57d89f970a6ed587d676ca87b7bec1 623 Pfam PF01553 Acyltransferase 439 567 1.8E-25 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_00105 9e57d89f970a6ed587d676ca87b7bec1 623 Gene3D G3DSA:1.20.1250.20 40 420 2.7E-24 T 13-10-2018 P40_13205 9b5993068793f4d47903725200cc7b32 344 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 147.7 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 P40_13205 9b5993068793f4d47903725200cc7b32 344 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 2.1E-110 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 P40_13205 9b5993068793f4d47903725200cc7b32 344 Gene3D G3DSA:3.40.718.10 2 342 9.7E-125 T 13-10-2018 P40_13205 9b5993068793f4d47903725200cc7b32 344 Pfam PF02504 Fatty acid synthesis protein 4 324 1.3E-104 T 13-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 P40_13205 9b5993068793f4d47903725200cc7b32 344 SUPERFAMILY SSF53659 5 335 4.11E-105 T 13-10-2018 P40_13205 9b5993068793f4d47903725200cc7b32 344 PIRSF PIRSF002465 2 340 2.0E-126 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 P40_18725 ab70e20ce275f759b062bde180a89f23 158 Gene3D G3DSA:3.10.50.30 76 158 1.3E-30 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 P40_18725 ab70e20ce275f759b062bde180a89f23 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 P40_18725 ab70e20ce275f759b062bde180a89f23 158 PIRSF PIRSF006092 1 158 3.5E-52 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 P40_18725 ab70e20ce275f759b062bde180a89f23 158 SUPERFAMILY SSF54534 82 157 2.35E-24 T 13-10-2018 P40_18725 ab70e20ce275f759b062bde180a89f23 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 5.4E-31 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 P40_18725 ab70e20ce275f759b062bde180a89f23 158 Gene3D G3DSA:1.10.287.180 1 75 1.3E-31 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 P40_18725 ab70e20ce275f759b062bde180a89f23 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 2.7E-59 T 13-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 P40_18725 ab70e20ce275f759b062bde180a89f23 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.806 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 P40_18725 ab70e20ce275f759b062bde180a89f23 158 SUPERFAMILY SSF46557 3 78 3.92E-28 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 P40_18725 ab70e20ce275f759b062bde180a89f23 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 P40_18725 ab70e20ce275f759b062bde180a89f23 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 6.4E-29 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 P40_18530 1f711dc4ba8203c352f59d7b33026925 461 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 28 454 8.7E-158 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 P40_18530 1f711dc4ba8203c352f59d7b33026925 461 SUPERFAMILY SSF81891 189 424 3.53E-50 T 13-10-2018 P40_18530 1f711dc4ba8203c352f59d7b33026925 461 Pfam PF12626 Polymerase A arginine-rich C-terminus 335 452 2.5E-43 T 13-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain P40_18530 1f711dc4ba8203c352f59d7b33026925 461 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 218 280 8.2E-23 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 P40_18530 1f711dc4ba8203c352f59d7b33026925 461 Gene3D G3DSA:3.30.460.10 25 188 1.8E-59 T 13-10-2018 P40_18530 1f711dc4ba8203c352f59d7b33026925 461 Gene3D G3DSA:1.10.3090.10 189 437 9.4E-92 T 13-10-2018 P40_18530 1f711dc4ba8203c352f59d7b33026925 461 Pfam PF01743 Poly A polymerase head domain 59 191 1.6E-35 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 P40_18530 1f711dc4ba8203c352f59d7b33026925 461 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 23 453 37.162 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 P40_18530 1f711dc4ba8203c352f59d7b33026925 461 SUPERFAMILY SSF81301 32 187 3.27E-38 T 13-10-2018 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 22 47 3.8E-117 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 438 459 3.8E-117 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 388 407 3.8E-117 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 120 3.8E-117 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 69 92 3.8E-117 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 255 276 3.8E-117 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 175 193 3.8E-117 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 204 223 3.8E-117 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 301 316 3.8E-117 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 325 346 3.8E-117 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 360 378 3.8E-117 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 SUPERFAMILY SSF81442 19 533 8.63E-189 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 Gene3D G3DSA:1.20.210.10 9 534 1.1E-210 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 31 479 9.7E-147 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 257 311 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05395 dc652783cfeaf86d9d82e2a5cb7e47f7 534 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 23 533 1.2E-208 T 13-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 P40_07020 972f7879c432abab63f977dff7460231 391 Pfam PF02803 Thiolase, C-terminal domain 265 390 7.2E-49 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_07020 972f7879c432abab63f977dff7460231 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 P40_07020 972f7879c432abab63f977dff7460231 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 4.9E-138 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_07020 972f7879c432abab63f977dff7460231 391 SUPERFAMILY SSF53901 266 390 1.55E-44 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_07020 972f7879c432abab63f977dff7460231 391 Gene3D G3DSA:3.40.47.10 8 271 4.4E-148 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_07020 972f7879c432abab63f977dff7460231 391 PIRSF PIRSF000429 2 391 1.0E-129 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_07020 972f7879c432abab63f977dff7460231 391 Gene3D G3DSA:3.40.47.10 138 385 4.4E-148 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_07020 972f7879c432abab63f977dff7460231 391 SUPERFAMILY SSF53901 4 261 7.27E-77 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_07020 972f7879c432abab63f977dff7460231 391 Pfam PF00108 Thiolase, N-terminal domain 8 257 3.4E-77 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 P40_07020 972f7879c432abab63f977dff7460231 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 P40_07020 972f7879c432abab63f977dff7460231 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 2.5E-204 T 13-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 P40_07020 972f7879c432abab63f977dff7460231 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 61.245 T 13-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 P40_07020 972f7879c432abab63f977dff7460231 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 P40_01370 e1603b6b506b1613d1dce4e19163f23c 423 Gene3D G3DSA:3.50.50.60 10 353 1.9E-101 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_01370 e1603b6b506b1613d1dce4e19163f23c 423 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 309 322 - T 13-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 P40_01370 e1603b6b506b1613d1dce4e19163f23c 423 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 10 405 2.2E-108 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 P40_01370 e1603b6b506b1613d1dce4e19163f23c 423 Pfam PF01494 FAD binding domain 9 355 3.0E-28 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 P40_01370 e1603b6b506b1613d1dce4e19163f23c 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 310 3.6E-20 T 13-10-2018 P40_01370 e1603b6b506b1613d1dce4e19163f23c 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 326 3.6E-20 T 13-10-2018 P40_01370 e1603b6b506b1613d1dce4e19163f23c 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 3.6E-20 T 13-10-2018 P40_01370 e1603b6b506b1613d1dce4e19163f23c 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 3.6E-20 T 13-10-2018 P40_01370 e1603b6b506b1613d1dce4e19163f23c 423 SUPERFAMILY SSF51905 10 399 1.83E-62 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_01370 e1603b6b506b1613d1dce4e19163f23c 423 Gene3D G3DSA:3.30.9.50 84 284 1.9E-101 T 13-10-2018 P40_21195 e66d9ee3dbced0c7a0066cc55501dfc9 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 2.0E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_21195 e66d9ee3dbced0c7a0066cc55501dfc9 234 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 227 1.3E-106 T 13-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 P40_21195 e66d9ee3dbced0c7a0066cc55501dfc9 234 SUPERFAMILY SSF52172 2 127 8.25E-44 T 13-10-2018 IPR011006 CheY-like superfamily P40_21195 e66d9ee3dbced0c7a0066cc55501dfc9 234 SUPERFAMILY SSF46894 129 227 9.07E-30 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_21195 e66d9ee3dbced0c7a0066cc55501dfc9 234 Gene3D G3DSA:3.40.50.2300 2 128 5.2E-39 T 13-10-2018 P40_21195 e66d9ee3dbced0c7a0066cc55501dfc9 234 Pfam PF00072 Response regulator receiver domain 6 118 1.8E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_21195 e66d9ee3dbced0c7a0066cc55501dfc9 234 SMART SM00862 151 226 4.1E-27 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_21195 e66d9ee3dbced0c7a0066cc55501dfc9 234 SMART SM00448 4 117 5.4E-45 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_21195 e66d9ee3dbced0c7a0066cc55501dfc9 234 Gene3D G3DSA:1.10.10.10 129 229 7.8E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_10330 895e72562c34a995b0f2453cfd769df8 296 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 179 191 2.8E-12 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 P40_10330 895e72562c34a995b0f2453cfd769df8 296 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 51 64 2.8E-12 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 P40_10330 895e72562c34a995b0f2453cfd769df8 296 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 2.8E-12 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 P40_10330 895e72562c34a995b0f2453cfd769df8 296 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 2.8E-12 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 P40_10330 895e72562c34a995b0f2453cfd769df8 296 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 220 2.2E-15 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 P40_10330 895e72562c34a995b0f2453cfd769df8 296 Gene3D G3DSA:1.10.1020.10 58 159 5.2E-28 T 13-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 P40_10330 895e72562c34a995b0f2453cfd769df8 296 Gene3D G3DSA:3.40.50.150 7 235 5.2E-28 T 13-10-2018 P40_10330 895e72562c34a995b0f2453cfd769df8 296 PIRSF PIRSF000398 1 271 1.9E-34 T 13-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 P40_10330 895e72562c34a995b0f2453cfd769df8 296 SUPERFAMILY SSF53335 6 267 3.99E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_05665 39260a577e47f692b4d62197542a9e2b 119 Pfam PF01521 Iron-sulphur cluster biosynthesis 12 112 3.5E-19 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 P40_05665 39260a577e47f692b4d62197542a9e2b 119 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 P40_05665 39260a577e47f692b4d62197542a9e2b 119 SUPERFAMILY SSF89360 13 105 1.16E-24 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 P40_05665 39260a577e47f692b4d62197542a9e2b 119 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 13 116 4.5E-29 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 P40_05665 39260a577e47f692b4d62197542a9e2b 119 Gene3D G3DSA:2.60.300.12 12 119 1.0E-29 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 P40_13530 4d5ae18416b3903c64a2ab6d5423a9ec 403 PIRSF PIRSF000429 1 403 7.7E-108 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_13530 4d5ae18416b3903c64a2ab6d5423a9ec 403 ProSitePatterns PS00737 Thiolases signature 2. 349 365 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 P40_13530 4d5ae18416b3903c64a2ab6d5423a9ec 403 Pfam PF02803 Thiolase, C-terminal domain 281 402 7.5E-46 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_13530 4d5ae18416b3903c64a2ab6d5423a9ec 403 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 P40_13530 4d5ae18416b3903c64a2ab6d5423a9ec 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 P40_13530 4d5ae18416b3903c64a2ab6d5423a9ec 403 Gene3D G3DSA:3.40.47.10 126 398 3.9E-140 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_13530 4d5ae18416b3903c64a2ab6d5423a9ec 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 401 1.2E-129 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_13530 4d5ae18416b3903c64a2ab6d5423a9ec 403 Gene3D G3DSA:3.40.47.10 6 300 3.9E-140 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_13530 4d5ae18416b3903c64a2ab6d5423a9ec 403 SUPERFAMILY SSF53901 1 276 1.0E-61 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_13530 4d5ae18416b3903c64a2ab6d5423a9ec 403 Pfam PF00108 Thiolase, N-terminal domain 5 230 6.2E-44 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 P40_13530 4d5ae18416b3903c64a2ab6d5423a9ec 403 SUPERFAMILY SSF53901 282 402 1.65E-43 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_04050 2c3a82a9b769d2e8b73bcb2352eabd49 220 Gene3D G3DSA:2.40.30.20 103 202 6.4E-36 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_04050 2c3a82a9b769d2e8b73bcb2352eabd49 220 Pfam PF00677 Lumazine binding domain 3 88 3.7E-21 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_04050 2c3a82a9b769d2e8b73bcb2352eabd49 220 Pfam PF00677 Lumazine binding domain 101 185 4.3E-26 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_04050 2c3a82a9b769d2e8b73bcb2352eabd49 220 Gene3D G3DSA:2.40.30.20 1 90 3.5E-26 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_04050 2c3a82a9b769d2e8b73bcb2352eabd49 220 PIRSF PIRSF000498 1 213 6.6E-75 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_04050 2c3a82a9b769d2e8b73bcb2352eabd49 220 SUPERFAMILY SSF63380 1 89 3.74E-23 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel P40_04050 2c3a82a9b769d2e8b73bcb2352eabd49 220 SUPERFAMILY SSF63380 94 195 2.3E-33 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel P40_04050 2c3a82a9b769d2e8b73bcb2352eabd49 220 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 1.2E-62 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_18185 069d1a1f9c1bc49c7859e1e45bfedc2a 130 Pfam PF00410 Ribosomal protein S8 5 129 1.2E-47 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18185 069d1a1f9c1bc49c7859e1e45bfedc2a 130 SUPERFAMILY SSF56047 2 129 9.16E-44 T 13-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18185 069d1a1f9c1bc49c7859e1e45bfedc2a 130 Gene3D G3DSA:3.30.1370.30 2 72 9.9E-28 T 13-10-2018 P40_18185 069d1a1f9c1bc49c7859e1e45bfedc2a 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18185 069d1a1f9c1bc49c7859e1e45bfedc2a 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.533 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18185 069d1a1f9c1bc49c7859e1e45bfedc2a 130 Gene3D G3DSA:3.30.1490.10 73 129 3.1E-23 T 13-10-2018 P40_00830 05553eb05f98ce83f10c12c79bfabcf9 459 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 1.8E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_00830 05553eb05f98ce83f10c12c79bfabcf9 459 SUPERFAMILY SSF53383 96 455 2.23E-70 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_00830 05553eb05f98ce83f10c12c79bfabcf9 459 SUPERFAMILY SSF46785 3 73 8.38E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_00830 05553eb05f98ce83f10c12c79bfabcf9 459 Pfam PF00155 Aminotransferase class I and II 138 449 1.4E-28 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_00830 05553eb05f98ce83f10c12c79bfabcf9 459 Gene3D G3DSA:3.40.640.10 141 357 2.7E-71 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_00830 05553eb05f98ce83f10c12c79bfabcf9 459 Gene3D G3DSA:1.10.10.10 2 69 5.7E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_00830 05553eb05f98ce83f10c12c79bfabcf9 459 SMART SM00345 10 69 5.5E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_00830 05553eb05f98ce83f10c12c79bfabcf9 459 Gene3D G3DSA:3.90.1150.10 102 453 2.7E-71 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_12215 8323597da45dd25fa4e2b0cb9630b397 246 Gene3D G3DSA:1.10.10.10 7 86 8.7E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_12215 8323597da45dd25fa4e2b0cb9630b397 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 5.6E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_12215 8323597da45dd25fa4e2b0cb9630b397 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 5.6E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_12215 8323597da45dd25fa4e2b0cb9630b397 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 85 1.2E-19 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_12215 8323597da45dd25fa4e2b0cb9630b397 246 SUPERFAMILY SSF48008 91 224 2.51E-24 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_12215 8323597da45dd25fa4e2b0cb9630b397 246 Gene3D G3DSA:1.20.120.530 88 232 5.4E-29 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_12215 8323597da45dd25fa4e2b0cb9630b397 246 Pfam PF07729 FCD domain 95 215 2.0E-19 T 13-10-2018 IPR011711 GntR, C-terminal P40_12215 8323597da45dd25fa4e2b0cb9630b397 246 SUPERFAMILY SSF46785 24 88 1.01E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_12215 8323597da45dd25fa4e2b0cb9630b397 246 SMART SM00345 27 85 5.1E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_12215 8323597da45dd25fa4e2b0cb9630b397 246 SMART SM00895 95 216 1.4E-17 T 13-10-2018 IPR011711 GntR, C-terminal P40_19375 3475277f741bef8de20a95350f5eab05 529 Gene3D G3DSA:1.20.1720.10 19 226 1.4E-32 T 13-10-2018 P40_19375 3475277f741bef8de20a95350f5eab05 529 Pfam PF07690 Major Facilitator Superfamily 24 415 6.6E-48 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_19375 3475277f741bef8de20a95350f5eab05 529 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 506 7.7E-93 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 P40_19375 3475277f741bef8de20a95350f5eab05 529 SUPERFAMILY SSF103473 10 515 6.67E-60 T 13-10-2018 IPR036259 MFS transporter superfamily P40_09495 10fa2b3a1f3c380d77a0577b2d0fcbc4 430 Gene3D G3DSA:3.30.930.10 109 430 4.3E-116 T 13-10-2018 P40_09495 10fa2b3a1f3c380d77a0577b2d0fcbc4 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 7.1E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P40_09495 10fa2b3a1f3c380d77a0577b2d0fcbc4 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 7.1E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P40_09495 10fa2b3a1f3c380d77a0577b2d0fcbc4 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 7.1E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P40_09495 10fa2b3a1f3c380d77a0577b2d0fcbc4 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 7.1E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P40_09495 10fa2b3a1f3c380d77a0577b2d0fcbc4 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 7.1E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P40_09495 10fa2b3a1f3c380d77a0577b2d0fcbc4 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 7.0E-162 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P40_09495 10fa2b3a1f3c380d77a0577b2d0fcbc4 430 PIRSF PIRSF001529 1 430 6.5E-174 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P40_09495 10fa2b3a1f3c380d77a0577b2d0fcbc4 430 SUPERFAMILY SSF46589 1 116 1.46E-23 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 P40_09495 10fa2b3a1f3c380d77a0577b2d0fcbc4 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 111 1.4E-22 T 13-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 P40_09495 10fa2b3a1f3c380d77a0577b2d0fcbc4 430 Gene3D G3DSA:1.10.287.40 1 108 6.9E-18 T 13-10-2018 P40_09495 10fa2b3a1f3c380d77a0577b2d0fcbc4 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 224 406 4.4E-32 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_09495 10fa2b3a1f3c380d77a0577b2d0fcbc4 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 40.878 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P40_09495 10fa2b3a1f3c380d77a0577b2d0fcbc4 430 SUPERFAMILY SSF55681 120 424 1.76E-97 T 13-10-2018 P40_07730 48a77fc0f5b26af67ae51842fb0b86c9 147 Gene3D G3DSA:1.10.760.10 46 144 2.0E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_07730 48a77fc0f5b26af67ae51842fb0b86c9 147 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 10 140 3.9E-62 T 13-10-2018 IPR030991 Cytochrome c-550 PedF P40_07730 48a77fc0f5b26af67ae51842fb0b86c9 147 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 60 136 5.1E-14 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_07730 48a77fc0f5b26af67ae51842fb0b86c9 147 SUPERFAMILY SSF46626 1 139 1.23E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_15600 65024d70c7d43ac27b3d37eea7f0e814 274 Pfam PF13444 Acetyltransferase (GNAT) domain 54 154 1.0E-26 T 13-10-2018 P40_15600 65024d70c7d43ac27b3d37eea7f0e814 274 SUPERFAMILY SSF55729 36 243 5.71E-38 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_15600 65024d70c7d43ac27b3d37eea7f0e814 274 Gene3D G3DSA:3.40.630.30 39 202 4.4E-25 T 13-10-2018 P40_16460 acf8c985901acce7874ee64d67b34d27 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 24.312 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_16460 acf8c985901acce7874ee64d67b34d27 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_16460 acf8c985901acce7874ee64d67b34d27 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 2.2E-135 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_16460 acf8c985901acce7874ee64d67b34d27 360 Pfam PF00953 Glycosyl transferase family 4 99 284 1.8E-36 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 P40_04460 ec289746affca96b97d7a19a398cfd5a 423 Pfam PF12849 PBP superfamily domain 59 392 2.2E-31 T 13-10-2018 IPR024370 PBP domain P40_04460 ec289746affca96b97d7a19a398cfd5a 423 SUPERFAMILY SSF53850 74 397 1.21E-36 T 13-10-2018 P40_04460 ec289746affca96b97d7a19a398cfd5a 423 Gene3D G3DSA:3.40.190.260 75 394 7.6E-43 T 13-10-2018 P40_04460 ec289746affca96b97d7a19a398cfd5a 423 Gene3D G3DSA:3.40.190.10 167 317 7.6E-43 T 13-10-2018 P40_14190 6d7428b9b7a3f15f693c6ae374d08a0c 376 PIRSF PIRSF000267 3 376 2.4E-116 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 P40_14190 6d7428b9b7a3f15f693c6ae374d08a0c 376 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 3 374 2.0E-138 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 P40_14190 6d7428b9b7a3f15f693c6ae374d08a0c 376 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 8 361 5.2E-104 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 P40_07095 548089aa9a407e5cbc4a7fab374d9b63 193 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 6 71 1.8E-7 T 13-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 P40_07095 548089aa9a407e5cbc4a7fab374d9b63 193 SUPERFAMILY SSF89069 6 69 7.19E-10 T 13-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 P40_07095 548089aa9a407e5cbc4a7fab374d9b63 193 Gene3D G3DSA:1.10.10.880 4 69 6.1E-8 T 13-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 P40_04660 cee63d81a569ecce15db2ca89c70be9d 129 Hamap MF_00791 Protein ApaG [apaG]. 4 129 31.196 T 13-10-2018 IPR023065 Uncharacterised protein family ApaG P40_04660 cee63d81a569ecce15db2ca89c70be9d 129 Gene3D G3DSA:2.60.40.1470 2 129 6.6E-46 T 13-10-2018 IPR036767 ApaG domain superfamily P40_04660 cee63d81a569ecce15db2ca89c70be9d 129 SUPERFAMILY SSF110069 10 129 1.96E-44 T 13-10-2018 IPR036767 ApaG domain superfamily P40_04660 cee63d81a569ecce15db2ca89c70be9d 129 Pfam PF04379 ApaG domain 21 105 9.3E-34 T 13-10-2018 IPR007474 ApaG domain P40_05575 2950afcec9b156f1a68f6ddb1bd6c98d 196 Pfam PF04011 LemA family 9 195 3.4E-66 T 13-10-2018 IPR007156 LemA P40_05575 2950afcec9b156f1a68f6ddb1bd6c98d 196 Gene3D G3DSA:1.20.1440.20 18 195 4.9E-63 T 13-10-2018 IPR023353 LemA-like domain superfamily P40_05575 2950afcec9b156f1a68f6ddb1bd6c98d 196 SUPERFAMILY SSF140478 25 170 4.71E-53 T 13-10-2018 IPR023353 LemA-like domain superfamily P40_13450 25cb3a28e07a25772e23b398c44fc35a 173 SUPERFAMILY SSF88659 109 168 7.29E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_13450 25cb3a28e07a25772e23b398c44fc35a 173 Gene3D G3DSA:1.10.10.10 96 171 9.9E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_13450 25cb3a28e07a25772e23b398c44fc35a 173 Pfam PF04542 Sigma-70 region 2 15 81 3.0E-13 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_13450 25cb3a28e07a25772e23b398c44fc35a 173 Gene3D G3DSA:1.10.1740.10 3 78 7.6E-9 T 13-10-2018 P40_13450 25cb3a28e07a25772e23b398c44fc35a 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 164 2.7E-20 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_13450 25cb3a28e07a25772e23b398c44fc35a 173 SUPERFAMILY SSF88946 10 78 4.71E-13 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_13450 25cb3a28e07a25772e23b398c44fc35a 173 Pfam PF08281 Sigma-70, region 4 120 166 7.6E-18 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_16695 364c39daa1b298dc193a5a5973198571 410 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 15 410 3.7E-73 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) P40_16695 364c39daa1b298dc193a5a5973198571 410 SUPERFAMILY SSF56935 23 410 4.94E-75 T 13-10-2018 P40_16695 364c39daa1b298dc193a5a5973198571 410 Gene3D G3DSA:2.40.160.60 23 410 4.3E-100 T 13-10-2018 P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 Pfam PF02151 UvrB/uvrC motif 633 666 1.3E-7 T 13-10-2018 IPR001943 UVR domain GO:0005515 P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 Pfam PF00271 Helicase conserved C-terminal domain 442 544 7.3E-18 T 13-10-2018 IPR001650 Helicase, C-terminal P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 SUPERFAMILY SSF46600 620 666 6.54E-12 T 13-10-2018 IPR036876 UVR domain superfamily P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 SUPERFAMILY SSF52540 38 586 8.37E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 SMART SM00487 10 426 5.8E-28 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 Hamap MF_00204 UvrABC system protein B [uvrB]. 4 667 43.371 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 SMART SM00490 460 546 5.6E-20 T 13-10-2018 IPR001650 Helicase, C-terminal P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 Gene3D G3DSA:4.10.860.10 617 670 1.5E-16 T 13-10-2018 P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 6 665 0.0 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 Gene3D G3DSA:3.40.50.300 274 414 2.3E-52 T 13-10-2018 P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 Pfam PF04851 Type III restriction enzyme, res subunit 17 98 2.1E-9 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 Gene3D G3DSA:3.40.50.300 1 237 6.1E-75 T 13-10-2018 P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 SUPERFAMILY SSF52540 5 415 4.75E-140 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 Gene3D G3DSA:3.40.50.300 415 596 2.3E-49 T 13-10-2018 P40_08335 13e0be3f553a13d8ff9ba052f2f43413 671 Pfam PF12344 Ultra-violet resistance protein B 552 594 4.4E-20 T 13-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain P40_04410 2fcbba247edd479026c24b903ce0f995 565 Pfam PF16930 Putative porin 37 565 1.7E-203 T 13-10-2018 IPR032638 Putative bacterial porin P40_04410 2fcbba247edd479026c24b903ce0f995 565 SUPERFAMILY SSF56935 128 540 2.2E-7 T 13-10-2018 P40_11000 e1ed7ca87b80b6ce07026b435cf5e95f 60 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 48 1.9E-12 T 13-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type P40_11000 e1ed7ca87b80b6ce07026b435cf5e95f 60 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 8.3E-16 T 13-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type P40_06125 bbf5271f75b12f84439e47b01f4222f9 210 Pfam PF10077 Uncharacterized protein conserved in bacteria (DUF2314) 39 97 6.9E-5 T 13-10-2018 IPR018756 Domain of unknown function DUF2314 P40_06125 bbf5271f75b12f84439e47b01f4222f9 210 Pfam PF09951 Protein of unknown function (DUF2185) 117 200 7.4E-24 T 13-10-2018 IPR018689 Domain of unknown function DUF2185 P40_03240 60d3d846816a534a27d41f77c21ceedc 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 6.6E-22 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 P40_03240 60d3d846816a534a27d41f77c21ceedc 189 Gene3D G3DSA:2.30.30.30 1 64 3.4E-28 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 P40_03240 60d3d846816a534a27d41f77c21ceedc 189 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site P40_03240 60d3d846816a534a27d41f77c21ceedc 189 PIRSF PIRSF005901 2 188 7.4E-66 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP P40_03240 60d3d846816a534a27d41f77c21ceedc 189 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.407 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 P40_03240 60d3d846816a534a27d41f77c21ceedc 189 Gene3D G3DSA:2.40.50.140 66 127 1.7E-27 T 13-10-2018 P40_03240 60d3d846816a534a27d41f77c21ceedc 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 2.7E-78 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 P40_03240 60d3d846816a534a27d41f77c21ceedc 189 SUPERFAMILY SSF50249 69 128 1.88E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_03240 60d3d846816a534a27d41f77c21ceedc 189 SUPERFAMILY SSF50249 130 187 1.88E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_03240 60d3d846816a534a27d41f77c21ceedc 189 SUPERFAMILY SSF50104 2 63 4.06E-21 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily P40_03240 60d3d846816a534a27d41f77c21ceedc 189 Gene3D G3DSA:2.40.50.140 130 188 1.8E-27 T 13-10-2018 P40_03240 60d3d846816a534a27d41f77c21ceedc 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 2.2E-26 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like P40_03240 60d3d846816a534a27d41f77c21ceedc 189 SMART SM01185 69 123 4.3E-26 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 P40_03240 60d3d846816a534a27d41f77c21ceedc 189 SMART SM00841 131 186 7.4E-32 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 P40_03240 60d3d846816a534a27d41f77c21ceedc 189 Pfam PF09285 Elongation factor P, C-terminal 131 186 2.0E-25 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 P40_21320 04cd06306fc7373739d797ef6a51fc13 628 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 414 429 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 P40_21320 04cd06306fc7373739d797ef6a51fc13 628 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 591 608 2.4E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_21320 04cd06306fc7373739d797ef6a51fc13 628 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 608 628 2.4E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_21320 04cd06306fc7373739d797ef6a51fc13 628 SUPERFAMILY SSF52540 332 568 4.93E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_21320 04cd06306fc7373739d797ef6a51fc13 628 SUPERFAMILY SSF46689 538 628 2.06E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_21320 04cd06306fc7373739d797ef6a51fc13 628 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 351 364 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 P40_21320 04cd06306fc7373739d797ef6a51fc13 628 Gene3D G3DSA:3.30.450.40 24 209 1.0E-31 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_21320 04cd06306fc7373739d797ef6a51fc13 628 Pfam PF00158 Sigma-54 interaction domain 333 493 1.1E-62 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 P40_21320 04cd06306fc7373739d797ef6a51fc13 628 Gene3D G3DSA:1.10.10.60 582 626 5.7E-14 T 13-10-2018 P40_21320 04cd06306fc7373739d797ef6a51fc13 628 Pfam PF02954 Bacterial regulatory protein, Fis family 585 625 2.7E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_21320 04cd06306fc7373739d797ef6a51fc13 628 Gene3D G3DSA:3.40.50.300 325 499 1.2E-60 T 13-10-2018 P40_21320 04cd06306fc7373739d797ef6a51fc13 628 Gene3D G3DSA:1.10.8.60 500 574 1.7E-13 T 13-10-2018 P40_21320 04cd06306fc7373739d797ef6a51fc13 628 SMART SM00382 347 491 2.1E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_18400 cd9303a55baec2484ae10e6eba1c890a 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_18400 cd9303a55baec2484ae10e6eba1c890a 399 SUPERFAMILY SSF55174 320 398 1.84E-9 T 13-10-2018 P40_18400 cd9303a55baec2484ae10e6eba1c890a 399 Gene3D G3DSA:3.40.50.620 2 218 1.5E-76 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_18400 cd9303a55baec2484ae10e6eba1c890a 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 399 5.0E-112 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 P40_18400 cd9303a55baec2484ae10e6eba1c890a 399 SUPERFAMILY SSF52374 5 308 4.47E-97 T 13-10-2018 P40_18400 cd9303a55baec2484ae10e6eba1c890a 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.2E-25 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 P40_18400 cd9303a55baec2484ae10e6eba1c890a 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.2E-25 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 P40_18400 cd9303a55baec2484ae10e6eba1c890a 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.2E-25 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 P40_18400 cd9303a55baec2484ae10e6eba1c890a 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.2E-25 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 P40_18400 cd9303a55baec2484ae10e6eba1c890a 399 Gene3D G3DSA:3.10.290.10 327 398 3.5E-8 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 P40_18400 cd9303a55baec2484ae10e6eba1c890a 399 Gene3D G3DSA:1.10.240.10 219 326 6.6E-28 T 13-10-2018 P40_18400 cd9303a55baec2484ae10e6eba1c890a 399 Pfam PF00579 tRNA synthetases class I (W and Y) 31 309 2.1E-78 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_18400 cd9303a55baec2484ae10e6eba1c890a 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 398 46.273 T 13-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 P40_21570 b1a8d9d4f5431d6ea5783adc05140975 302 Hamap MF_01393 ATP synthase subunit a [atpB]. 57 302 14.493 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21570 b1a8d9d4f5431d6ea5783adc05140975 302 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 72 297 4.7E-37 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21570 b1a8d9d4f5431d6ea5783adc05140975 302 SUPERFAMILY SSF81336 113 296 2.48E-38 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21570 b1a8d9d4f5431d6ea5783adc05140975 302 Gene3D G3DSA:1.20.120.220 113 302 1.3E-53 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21570 b1a8d9d4f5431d6ea5783adc05140975 302 ProSitePatterns PS00449 ATP synthase a subunit signature. 238 247 - T 13-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21570 b1a8d9d4f5431d6ea5783adc05140975 302 Pfam PF00119 ATP synthase A chain 70 296 2.7E-52 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_11205 4c13d7a35be38dafb745d9abbfeff475 392 Pfam PF07690 Major Facilitator Superfamily 17 356 4.2E-39 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_11205 4c13d7a35be38dafb745d9abbfeff475 392 SUPERFAMILY SSF103473 8 389 3.79E-49 T 13-10-2018 IPR036259 MFS transporter superfamily P40_11205 4c13d7a35be38dafb745d9abbfeff475 392 Gene3D G3DSA:1.20.1720.10 9 387 1.5E-90 T 13-10-2018 P40_11205 4c13d7a35be38dafb745d9abbfeff475 392 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 385 4.1E-81 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 P40_11205 4c13d7a35be38dafb745d9abbfeff475 392 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 P40_18100 8450454be329fff496fe058587f835b9 433 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 92 422 1.3E-19 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 P40_18100 8450454be329fff496fe058587f835b9 433 SUPERFAMILY SSF51695 90 425 7.06E-64 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 P40_18100 8450454be329fff496fe058587f835b9 433 Gene3D G3DSA:3.20.20.190 87 428 3.1E-36 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 P40_10735 78810a934b00946298332335bf3b6f58 209 Gene3D G3DSA:3.40.225.10 8 206 9.8E-51 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily P40_10735 78810a934b00946298332335bf3b6f58 209 SUPERFAMILY SSF53639 12 207 2.75E-40 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily P40_10735 78810a934b00946298332335bf3b6f58 209 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 209 98.708 T 13-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 P40_10735 78810a934b00946298332335bf3b6f58 209 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 18 207 1.1E-68 T 13-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 P40_10735 78810a934b00946298332335bf3b6f58 209 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 17 202 6.1E-41 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal P40_10735 78810a934b00946298332335bf3b6f58 209 SMART SM01007 16 203 1.8E-48 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal P40_13715 c628292946314b5bd5d34e08c108bc93 927 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 532 647 3.7E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_13715 c628292946314b5bd5d34e08c108bc93 927 Pfam PF00072 Response regulator receiver domain 799 915 6.2E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_13715 c628292946314b5bd5d34e08c108bc93 927 Pfam PF07696 7TMR-DISM extracellular 2 58 172 1.2E-22 T 13-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 P40_13715 c628292946314b5bd5d34e08c108bc93 927 SMART SM00388 419 484 6.8E-27 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_13715 c628292946314b5bd5d34e08c108bc93 927 Gene3D G3DSA:1.10.287.130 385 482 5.7E-26 T 13-10-2018 P40_13715 c628292946314b5bd5d34e08c108bc93 927 Pfam PF00512 His Kinase A (phospho-acceptor) domain 419 484 8.8E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_13715 c628292946314b5bd5d34e08c108bc93 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 588 9.6E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_13715 c628292946314b5bd5d34e08c108bc93 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 627 9.6E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_13715 c628292946314b5bd5d34e08c108bc93 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 646 9.6E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_13715 c628292946314b5bd5d34e08c108bc93 927 SUPERFAMILY SSF47384 413 485 2.35E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_13715 c628292946314b5bd5d34e08c108bc93 927 SUPERFAMILY SSF55874 473 647 2.23E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_13715 c628292946314b5bd5d34e08c108bc93 927 Gene3D G3DSA:3.30.565.10 483 652 2.9E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_13715 c628292946314b5bd5d34e08c108bc93 927 Gene3D G3DSA:2.60.40.2380 38 177 6.1E-15 T 13-10-2018 P40_13715 c628292946314b5bd5d34e08c108bc93 927 SUPERFAMILY SSF52172 794 917 5.98E-33 T 13-10-2018 IPR011006 CheY-like superfamily P40_13715 c628292946314b5bd5d34e08c108bc93 927 SMART SM00448 797 915 2.4E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_13715 c628292946314b5bd5d34e08c108bc93 927 Gene3D G3DSA:3.40.50.2300 786 923 1.6E-36 T 13-10-2018 P40_13715 c628292946314b5bd5d34e08c108bc93 927 SMART SM00387 531 649 1.9E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_13715 c628292946314b5bd5d34e08c108bc93 927 Pfam PF07695 7TM diverse intracellular signalling 185 387 1.5E-45 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 P40_07105 a654fd2b8131df391bcf6cffd9ab1be5 153 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 138 6.7E-28 T 13-10-2018 P40_07105 a654fd2b8131df391bcf6cffd9ab1be5 153 PIRSF PIRSF004923 1 146 3.5E-34 T 13-10-2018 IPR026268 Protein RseC P40_14805 3fc1cc765bfd07fdf51772d82713b236 585 ProSitePatterns PS00079 Multicopper oxidases signature 1. 542 562 - T 13-10-2018 IPR033138 Multicopper oxidases, conserved site P40_14805 3fc1cc765bfd07fdf51772d82713b236 585 ProSitePatterns PS00080 Multicopper oxidases signature 2. 547 558 - T 13-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 P40_14805 3fc1cc765bfd07fdf51772d82713b236 585 Pfam PF07731 Multicopper oxidase 448 565 4.7E-26 T 13-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 P40_14805 3fc1cc765bfd07fdf51772d82713b236 585 SUPERFAMILY SSF49503 142 360 3.14E-50 T 13-10-2018 IPR008972 Cupredoxin P40_14805 3fc1cc765bfd07fdf51772d82713b236 585 Pfam PF00394 Multicopper oxidase 217 321 1.1E-29 T 13-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 P40_14805 3fc1cc765bfd07fdf51772d82713b236 585 Gene3D G3DSA:2.60.40.420 143 350 8.9E-39 T 13-10-2018 IPR008972 Cupredoxin P40_14805 3fc1cc765bfd07fdf51772d82713b236 585 Gene3D G3DSA:2.60.40.420 17 137 2.1E-38 T 13-10-2018 IPR008972 Cupredoxin P40_14805 3fc1cc765bfd07fdf51772d82713b236 585 SUPERFAMILY SSF49503 15 156 4.03E-36 T 13-10-2018 IPR008972 Cupredoxin P40_14805 3fc1cc765bfd07fdf51772d82713b236 585 SUPERFAMILY SSF49503 430 568 1.33E-36 T 13-10-2018 IPR008972 Cupredoxin P40_14805 3fc1cc765bfd07fdf51772d82713b236 585 Pfam PF07732 Multicopper oxidase 34 138 2.3E-38 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 P40_14805 3fc1cc765bfd07fdf51772d82713b236 585 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 19 565 1.1E-210 T 13-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 P40_07475 ef8e2f80b75db7cac16c5c83a7e993a1 515 Pfam PF05230 MASE2 domain 23 112 8.6E-10 T 13-10-2018 IPR007894 MASE2 P40_07475 ef8e2f80b75db7cac16c5c83a7e993a1 515 SUPERFAMILY SSF55073 231 417 6.44E-63 T 13-10-2018 IPR029787 Nucleotide cyclase P40_07475 ef8e2f80b75db7cac16c5c83a7e993a1 515 Gene3D G3DSA:3.30.70.1230 228 424 1.6E-76 T 13-10-2018 IPR029787 Nucleotide cyclase P40_07475 ef8e2f80b75db7cac16c5c83a7e993a1 515 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 234 407 1.1E-36 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 P40_07475 ef8e2f80b75db7cac16c5c83a7e993a1 515 SMART SM00044 182 401 3.3E-30 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 P40_13400 595d28cc182b80da4bee13961d2eb688 123 Pfam PF04304 Protein of unknown function (DUF454) 4 117 2.1E-32 T 13-10-2018 IPR007401 Protein of unknown function DUF454 P40_13400 595d28cc182b80da4bee13961d2eb688 123 PIRSF PIRSF016789 1 120 1.6E-27 T 13-10-2018 IPR007401 Protein of unknown function DUF454 P40_04325 3df1c6aed7e41a2ca4fecb676ee58627 323 SMART SM00342 236 318 1.7E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_04325 3df1c6aed7e41a2ca4fecb676ee58627 323 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 10 193 2.1E-35 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_04325 3df1c6aed7e41a2ca4fecb676ee58627 323 Pfam PF12833 Helix-turn-helix domain 242 320 1.1E-15 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_04325 3df1c6aed7e41a2ca4fecb676ee58627 323 SUPERFAMILY SSF46689 271 320 2.33E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_04325 3df1c6aed7e41a2ca4fecb676ee58627 323 Gene3D G3DSA:1.10.10.60 216 323 2.9E-22 T 13-10-2018 P40_12415 28d55ae84d39d28a9beb594687daf6f2 712 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 36 525 1.7E-141 T 13-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein P40_12415 28d55ae84d39d28a9beb594687daf6f2 712 SUPERFAMILY SSF69255 384 471 1.07E-32 T 13-10-2018 P40_12415 28d55ae84d39d28a9beb594687daf6f2 712 Gene3D G3DSA:2.40.50.230 378 475 1.9E-42 T 13-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily P40_12415 28d55ae84d39d28a9beb594687daf6f2 712 Gene3D G3DSA:3.30.1920.30 238 302 4.9E-91 T 13-10-2018 P40_12415 28d55ae84d39d28a9beb594687daf6f2 712 SUPERFAMILY SSF69349 461 614 3.06E-45 T 13-10-2018 P40_12415 28d55ae84d39d28a9beb594687daf6f2 712 Gene3D G3DSA:2.30.110.50 29 350 4.9E-91 T 13-10-2018 P40_12415 28d55ae84d39d28a9beb594687daf6f2 712 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 30 542 2.0E-165 T 13-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset P40_12415 28d55ae84d39d28a9beb594687daf6f2 712 SUPERFAMILY SSF69279 209 376 3.74E-28 T 13-10-2018 P40_12415 28d55ae84d39d28a9beb594687daf6f2 712 SUPERFAMILY SSF69279 28 200 5.16E-47 T 13-10-2018 P40_12415 28d55ae84d39d28a9beb594687daf6f2 712 Gene3D G3DSA:3.55.50.10 111 204 4.9E-91 T 13-10-2018 P40_12415 28d55ae84d39d28a9beb594687daf6f2 712 SUPERFAMILY SSF69349 577 712 2.28E-16 T 13-10-2018 P40_12415 28d55ae84d39d28a9beb594687daf6f2 712 Pfam PF05954 Phage late control gene D protein (GPD) 42 350 1.1E-78 T 13-10-2018 P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 479 1.0E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 Gene3D G3DSA:3.40.50.2300 501 623 5.6E-42 T 13-10-2018 P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 SMART SM00387 366 482 1.8E-39 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 SUPERFAMILY SSF55874 307 479 1.15E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 Pfam PF00072 Response regulator receiver domain 505 617 7.0E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 SMART SM00388 253 318 1.4E-25 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 SUPERFAMILY SSF47384 239 319 1.41E-22 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 2.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 435 2.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 421 2.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 2.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 Gene3D G3DSA:1.10.287.130 217 316 3.0E-28 T 13-10-2018 P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 SUPERFAMILY SSF52172 503 623 2.7E-38 T 13-10-2018 IPR011006 CheY-like superfamily P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 318 2.9E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 SMART SM00448 502 617 1.4E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 Gene3D G3DSA:3.30.565.10 317 484 2.2E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_05745 6855e8f55de9fe37ee1e4180570b98de 628 SMART SM00304 179 231 0.0054 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_01625 9c4f5d9a54406823e10f0d908e6c255b 144 Gene3D G3DSA:3.40.630.30 1 144 3.6E-35 T 13-10-2018 P40_01625 9c4f5d9a54406823e10f0d908e6c255b 144 SUPERFAMILY SSF55729 1 143 4.43E-24 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_01625 9c4f5d9a54406823e10f0d908e6c255b 144 Pfam PF13673 Acetyltransferase (GNAT) domain 46 126 1.8E-13 T 13-10-2018 IPR000182 GNAT domain P40_17085 4f42faa3f4a3447b3c0a2ec916a06622 215 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 194 2.3E-28 T 13-10-2018 IPR020057 Ribosomal protein L25, beta domain P40_17085 4f42faa3f4a3447b3c0a2ec916a06622 215 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 176 1.8E-41 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 P40_17085 4f42faa3f4a3447b3c0a2ec916a06622 215 Pfam PF01386 Ribosomal L25p family 7 95 5.7E-25 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 P40_17085 4f42faa3f4a3447b3c0a2ec916a06622 215 SUPERFAMILY SSF50715 5 195 4.06E-52 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P40_17085 4f42faa3f4a3447b3c0a2ec916a06622 215 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 16 98 2.0E-25 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 P40_17085 4f42faa3f4a3447b3c0a2ec916a06622 215 Gene3D G3DSA:2.170.120.20 101 197 3.4E-24 T 13-10-2018 IPR037121 Ribosomal protein L25, C-terminal P40_17085 4f42faa3f4a3447b3c0a2ec916a06622 215 Gene3D G3DSA:2.40.240.10 5 98 2.8E-30 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P40_17085 4f42faa3f4a3447b3c0a2ec916a06622 215 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 189 29.186 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 P40_12715 018a001a3406308cea153e9b89bbd94c 347 Gene3D G3DSA:3.30.70.270 175 346 2.1E-59 T 13-10-2018 P40_12715 018a001a3406308cea153e9b89bbd94c 347 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 185 345 1.1E-49 T 13-10-2018 IPR000160 GGDEF domain P40_12715 018a001a3406308cea153e9b89bbd94c 347 SMART SM00267 178 347 9.7E-63 T 13-10-2018 IPR000160 GGDEF domain P40_12715 018a001a3406308cea153e9b89bbd94c 347 SUPERFAMILY SSF55073 194 345 4.08E-50 T 13-10-2018 IPR029787 Nucleotide cyclase P40_12715 018a001a3406308cea153e9b89bbd94c 347 Pfam PF00990 Diguanylate cyclase, GGDEF domain 189 344 4.5E-47 T 13-10-2018 IPR000160 GGDEF domain P40_02895 bc76aec589cf527264cfa18d11617296 474 Gene3D G3DSA:1.10.10.60 385 467 8.6E-24 T 13-10-2018 P40_02895 bc76aec589cf527264cfa18d11617296 474 Pfam PF02954 Bacterial regulatory protein, Fis family 425 464 1.1E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_02895 bc76aec589cf527264cfa18d11617296 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 447 467 2.0E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_02895 bc76aec589cf527264cfa18d11617296 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 430 447 2.0E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_02895 bc76aec589cf527264cfa18d11617296 474 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 P40_02895 bc76aec589cf527264cfa18d11617296 474 SMART SM00382 161 308 1.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_02895 bc76aec589cf527264cfa18d11617296 474 SUPERFAMILY SSF52172 4 186 6.26E-43 T 13-10-2018 IPR011006 CheY-like superfamily P40_02895 bc76aec589cf527264cfa18d11617296 474 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 P40_02895 bc76aec589cf527264cfa18d11617296 474 SUPERFAMILY SSF46689 381 467 2.78E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_02895 bc76aec589cf527264cfa18d11617296 474 SUPERFAMILY SSF52540 140 384 1.38E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_02895 bc76aec589cf527264cfa18d11617296 474 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 5 464 3.3E-226 T 13-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 P40_02895 bc76aec589cf527264cfa18d11617296 474 Pfam PF00072 Response regulator receiver domain 5 116 1.9E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_02895 bc76aec589cf527264cfa18d11617296 474 SMART SM00448 3 116 4.1E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_02895 bc76aec589cf527264cfa18d11617296 474 Pfam PF00158 Sigma-54 interaction domain 141 308 7.8E-72 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 P40_02895 bc76aec589cf527264cfa18d11617296 474 Gene3D G3DSA:3.40.50.300 128 312 8.7E-67 T 13-10-2018 P40_02895 bc76aec589cf527264cfa18d11617296 474 Gene3D G3DSA:3.40.50.2300 2 125 2.0E-37 T 13-10-2018 P40_02895 bc76aec589cf527264cfa18d11617296 474 Gene3D G3DSA:1.10.8.60 313 384 1.1E-17 T 13-10-2018 P40_02865 8b90484d9c75637fc86f506391bbe736 361 Pfam PF03054 tRNA methyl transferase 13 145 6.9E-13 T 13-10-2018 P40_02865 8b90484d9c75637fc86f506391bbe736 361 SUPERFAMILY SSF52402 11 261 9.85E-31 T 13-10-2018 P40_02865 8b90484d9c75637fc86f506391bbe736 361 Gene3D G3DSA:3.40.50.620 9 246 7.6E-39 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_01815 6209d32c878cb9a3fc25552d90499576 396 ProSitePatterns PS01288 Uncharacterized protein family UPF0027 signature. 28 57 - T 13-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 P40_01815 6209d32c878cb9a3fc25552d90499576 396 SUPERFAMILY SSF103365 9 396 3.27E-136 T 13-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 P40_01815 6209d32c878cb9a3fc25552d90499576 396 Pfam PF01139 tRNA-splicing ligase RtcB 28 396 2.2E-132 T 13-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 P40_01815 6209d32c878cb9a3fc25552d90499576 396 Gene3D G3DSA:3.90.1860.10 1 396 8.7E-120 T 13-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 P40_07055 b8c8cd0f605e579fcde75f5e7ef9e404 226 SMART SM00986 54 214 3.9E-42 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 P40_07055 b8c8cd0f605e579fcde75f5e7ef9e404 226 Gene3D G3DSA:3.40.470.10 2 226 1.9E-103 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 P40_07055 b8c8cd0f605e579fcde75f5e7ef9e404 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 9 225 41.188 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 P40_07055 b8c8cd0f605e579fcde75f5e7ef9e404 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 62 71 - T 13-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 P40_07055 b8c8cd0f605e579fcde75f5e7ef9e404 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 11 218 2.1E-85 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 P40_07055 b8c8cd0f605e579fcde75f5e7ef9e404 226 SMART SM00987 54 214 3.9E-42 T 13-10-2018 P40_07055 b8c8cd0f605e579fcde75f5e7ef9e404 226 SUPERFAMILY SSF52141 8 225 2.62E-96 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 P40_07055 b8c8cd0f605e579fcde75f5e7ef9e404 226 Pfam PF03167 Uracil DNA glycosylase superfamily 56 213 3.0E-27 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 P40_04795 2acd6af0a03adfa105f822bb91838e72 222 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 60 219 6.9E-40 T 13-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 P40_04795 2acd6af0a03adfa105f822bb91838e72 222 SUPERFAMILY SSF47240 59 195 2.08E-18 T 13-10-2018 IPR009078 Ferritin-like superfamily P40_04795 2acd6af0a03adfa105f822bb91838e72 222 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 13 222 30.27 T 13-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 P40_04795 2acd6af0a03adfa105f822bb91838e72 222 Gene3D G3DSA:1.20.1260.10 53 204 3.2E-7 T 13-10-2018 IPR012347 Ferritin-like P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 SMART SM00387 393 504 2.4E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 Gene3D G3DSA:3.30.450.20 19 147 2.8E-33 T 13-10-2018 P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 SUPERFAMILY SSF55785 139 255 1.61E-10 T 13-10-2018 IPR035965 PAS domain superfamily P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 SMART SM00091 145 211 0.11 T 13-10-2018 IPR000014 PAS domain P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 SMART SM00091 21 88 1.9E-9 T 13-10-2018 IPR000014 PAS domain P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 350 3.2E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 Pfam PF13426 PAS domain 158 256 0.0011 T 13-10-2018 IPR000014 PAS domain P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 Gene3D G3DSA:3.30.450.20 148 272 3.3E-11 T 13-10-2018 P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 142 5.0E-16 T 13-10-2018 IPR000014 PAS domain P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 Gene3D G3DSA:3.30.565.10 352 509 4.6E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 Pfam PF08447 PAS fold 44 119 1.2E-17 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 394 502 4.0E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 SUPERFAMILY SSF55785 27 138 3.4E-25 T 13-10-2018 IPR035965 PAS domain superfamily P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 SMART SM00086 216 258 2.3 T 13-10-2018 IPR001610 PAC motif P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 SMART SM00086 94 137 3.0E-6 T 13-10-2018 IPR001610 PAC motif P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 463 3.5E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 482 3.5E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 449 3.5E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 Gene3D G3DSA:1.10.287.130 285 348 1.4E-16 T 13-10-2018 P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 SMART SM00388 280 351 5.5E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 SUPERFAMILY SSF47384 275 349 2.16E-8 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_20080 e15190b71c29d8f740ed4434e2c8a45d 512 SUPERFAMILY SSF55874 342 502 2.75E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_19240 6d1f770caf86dac413dbb23e5d4d5c8f 210 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 12 184 1.1E-46 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 P40_19240 6d1f770caf86dac413dbb23e5d4d5c8f 210 SUPERFAMILY SSF52540 10 202 9.03E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_19240 6d1f770caf86dac413dbb23e5d4d5c8f 210 Gene3D G3DSA:3.40.50.300 10 208 2.8E-58 T 13-10-2018 P40_19240 6d1f770caf86dac413dbb23e5d4d5c8f 210 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 8 208 26.999 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 P40_19240 6d1f770caf86dac413dbb23e5d4d5c8f 210 PIRSF PIRSF006755 8 208 3.1E-59 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 P40_19240 6d1f770caf86dac413dbb23e5d4d5c8f 210 Pfam PF13500 AAA domain 11 203 1.2E-29 T 13-10-2018 P40_16910 898f5a0be70ebc982a2151a66029cdc9 485 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 484 36.536 T 13-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 P40_16910 898f5a0be70ebc982a2151a66029cdc9 485 SUPERFAMILY SSF89095 301 407 8.5E-36 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 P40_16910 898f5a0be70ebc982a2151a66029cdc9 485 Gene3D G3DSA:1.10.10.410 419 485 6.9E-24 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal P40_16910 898f5a0be70ebc982a2151a66029cdc9 485 SUPERFAMILY SSF55931 4 300 3.07E-111 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 P40_16910 898f5a0be70ebc982a2151a66029cdc9 485 Pfam PF02637 GatB domain 333 483 4.5E-53 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 P40_16910 898f5a0be70ebc982a2151a66029cdc9 485 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 149 163 - T 13-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 P40_16910 898f5a0be70ebc982a2151a66029cdc9 485 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 484 3.8E-164 T 13-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 P40_16910 898f5a0be70ebc982a2151a66029cdc9 485 Pfam PF02934 GatB/GatE catalytic domain 5 292 6.5E-106 T 13-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 P40_16910 898f5a0be70ebc982a2151a66029cdc9 485 Gene3D G3DSA:1.10.150.380 301 418 1.6E-35 T 13-10-2018 P40_16910 898f5a0be70ebc982a2151a66029cdc9 485 SMART SM00845 332 483 1.0E-82 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 P40_18730 50859b6494c5535c9859683ee884a453 1071 SUPERFAMILY SSF56059 128 401 3.18E-109 T 13-10-2018 P40_18730 50859b6494c5535c9859683ee884a453 1071 Gene3D G3DSA:3.30.470.20 665 935 8.0E-121 T 13-10-2018 P40_18730 50859b6494c5535c9859683ee884a453 1071 Gene3D G3DSA:3.40.50.20 1 116 1.9E-50 T 13-10-2018 P40_18730 50859b6494c5535c9859683ee884a453 1071 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.464 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18730 50859b6494c5535c9859683ee884a453 1071 SUPERFAMILY SSF52440 557 675 2.3E-48 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_18730 50859b6494c5535c9859683ee884a453 1071 Gene3D G3DSA:1.10.1030.10 404 553 3.0E-48 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18730 50859b6494c5535c9859683ee884a453 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 4.9E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18730 50859b6494c5535c9859683ee884a453 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 4.9E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18730 50859b6494c5535c9859683ee884a453 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 4.9E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18730 50859b6494c5535c9859683ee884a453 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.9E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18730 50859b6494c5535c9859683ee884a453 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.9E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18730 50859b6494c5535c9859683ee884a453 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 4.9E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18730 50859b6494c5535c9859683ee884a453 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 4.9E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18730 50859b6494c5535c9859683ee884a453 1071 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.113 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18730 50859b6494c5535c9859683ee884a453 1071 SMART SM00851 955 1041 2.9E-37 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain P40_18730 50859b6494c5535c9859683ee884a453 1071 Gene3D G3DSA:3.40.50.1380 936 1071 8.4E-40 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily P40_18730 50859b6494c5535c9859683ee884a453 1071 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.7E-37 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18730 50859b6494c5535c9859683ee884a453 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_18730 50859b6494c5535c9859683ee884a453 1071 SMART SM01096 424 547 3.9E-70 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18730 50859b6494c5535c9859683ee884a453 1071 Gene3D G3DSA:3.30.470.20 119 403 2.6E-128 T 13-10-2018 P40_18730 50859b6494c5535c9859683ee884a453 1071 SUPERFAMILY SSF52440 1 127 1.87E-50 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_18730 50859b6494c5535c9859683ee884a453 1071 SUPERFAMILY SSF52335 935 1069 5.63E-42 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily P40_18730 50859b6494c5535c9859683ee884a453 1071 Pfam PF02142 MGS-like domain 956 1041 4.1E-21 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain P40_18730 50859b6494c5535c9859683ee884a453 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_18730 50859b6494c5535c9859683ee884a453 1071 SUPERFAMILY SSF56059 673 933 7.25E-107 T 13-10-2018 P40_18730 50859b6494c5535c9859683ee884a453 1071 Gene3D G3DSA:3.40.50.20 554 662 1.7E-48 T 13-10-2018 P40_18730 50859b6494c5535c9859683ee884a453 1071 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18730 50859b6494c5535c9859683ee884a453 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 334 2.4E-70 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_18730 50859b6494c5535c9859683ee884a453 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 1.0E-37 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_18730 50859b6494c5535c9859683ee884a453 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_18730 50859b6494c5535c9859683ee884a453 1071 SUPERFAMILY SSF48108 397 554 1.83E-50 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_19345 ea22fa8feefbb44abd1ff1fd29454763 841 Gene3D G3DSA:2.40.50.140 344 435 1.4E-22 T 13-10-2018 P40_19345 ea22fa8feefbb44abd1ff1fd29454763 841 Pfam PF00912 Transglycosylase 35 209 2.3E-62 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_19345 ea22fa8feefbb44abd1ff1fd29454763 841 Pfam PF17092 Penicillin-binding protein OB-like domain 295 442 2.5E-22 T 13-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_19345 ea22fa8feefbb44abd1ff1fd29454763 841 Pfam PF00905 Penicillin binding protein transpeptidase domain 446 625 2.1E-24 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 P40_19345 ea22fa8feefbb44abd1ff1fd29454763 841 Pfam PF00905 Penicillin binding protein transpeptidase domain 664 768 4.8E-6 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 P40_19345 ea22fa8feefbb44abd1ff1fd29454763 841 Gene3D G3DSA:3.40.710.10 222 311 1.4E-5 T 13-10-2018 P40_19345 ea22fa8feefbb44abd1ff1fd29454763 841 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 44 779 5.2E-176 T 13-10-2018 P40_19345 ea22fa8feefbb44abd1ff1fd29454763 841 SUPERFAMILY SSF53955 22 233 2.02E-76 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily P40_19345 ea22fa8feefbb44abd1ff1fd29454763 841 Gene3D G3DSA:1.10.3810.10 28 221 1.5E-74 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_19345 ea22fa8feefbb44abd1ff1fd29454763 841 SUPERFAMILY SSF56601 190 829 1.87E-125 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like P40_06330 9b1f02fd546439c0cc19a56ddcab02a6 479 Gene3D G3DSA:1.20.1250.20 276 472 6.2E-16 T 13-10-2018 P40_06330 9b1f02fd546439c0cc19a56ddcab02a6 479 SUPERFAMILY SSF103473 20 474 1.48E-54 T 13-10-2018 IPR036259 MFS transporter superfamily P40_06330 9b1f02fd546439c0cc19a56ddcab02a6 479 Gene3D G3DSA:1.20.1720.10 20 232 9.6E-44 T 13-10-2018 P40_06330 9b1f02fd546439c0cc19a56ddcab02a6 479 Pfam PF07690 Major Facilitator Superfamily 23 423 6.8E-48 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_00420 c9bfbc1f939e893cf17202aecc2f173b 297 Pfam PF03466 LysR substrate binding domain 93 290 6.5E-24 T 13-10-2018 IPR005119 LysR, substrate-binding P40_00420 c9bfbc1f939e893cf17202aecc2f173b 297 Gene3D G3DSA:3.40.190.290 97 292 1.9E-18 T 13-10-2018 P40_00420 c9bfbc1f939e893cf17202aecc2f173b 297 Gene3D G3DSA:1.10.10.10 5 94 8.3E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_00420 c9bfbc1f939e893cf17202aecc2f173b 297 SUPERFAMILY SSF53850 92 293 9.91E-28 T 13-10-2018 P40_00420 c9bfbc1f939e893cf17202aecc2f173b 297 SUPERFAMILY SSF46785 5 101 3.71E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_00420 c9bfbc1f939e893cf17202aecc2f173b 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.8E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_02630 37a07cda06f981c8665fccf327d07558 309 Gene3D G3DSA:3.40.50.720 41 308 2.0E-72 T 13-10-2018 P40_02630 37a07cda06f981c8665fccf327d07558 309 SUPERFAMILY SSF51735 98 278 1.47E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_02630 37a07cda06f981c8665fccf327d07558 309 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 188 210 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site P40_02630 37a07cda06f981c8665fccf327d07558 309 Gene3D G3DSA:3.40.50.720 98 284 2.0E-72 T 13-10-2018 P40_02630 37a07cda06f981c8665fccf327d07558 309 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 217 233 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site P40_02630 37a07cda06f981c8665fccf327d07558 309 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 277 1.1E-48 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 P40_01335 caa9792000ffb2a7fb9ce8020337ddb6 505 SUPERFAMILY SSF55021 410 504 1.51E-25 T 13-10-2018 P40_01335 caa9792000ffb2a7fb9ce8020337ddb6 505 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 422 504 7.8E-24 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 P40_01335 caa9792000ffb2a7fb9ce8020337ddb6 505 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 319 409 2.8E-25 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 P40_01335 caa9792000ffb2a7fb9ce8020337ddb6 505 SUPERFAMILY SSF55021 326 413 2.75E-27 T 13-10-2018 P40_01335 caa9792000ffb2a7fb9ce8020337ddb6 505 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 P40_01335 caa9792000ffb2a7fb9ce8020337ddb6 505 SUPERFAMILY SSF53686 9 355 1.57E-106 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme P40_01335 caa9792000ffb2a7fb9ce8020337ddb6 505 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 306 9.5E-84 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme P40_01335 caa9792000ffb2a7fb9ce8020337ddb6 505 Gene3D G3DSA:3.40.1020.10 328 505 7.1E-68 T 13-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 P40_01335 caa9792000ffb2a7fb9ce8020337ddb6 505 Gene3D G3DSA:3.40.50.1100 50 146 2.9E-137 T 13-10-2018 P40_01335 caa9792000ffb2a7fb9ce8020337ddb6 505 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 5 504 1.8E-233 T 13-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 P40_01335 caa9792000ffb2a7fb9ce8020337ddb6 505 Gene3D G3DSA:3.40.50.1100 14 317 2.9E-137 T 13-10-2018 P40_19625 aa7c6a3ffcb8ba6a574865d93607993f 478 SUPERFAMILY SSF53067 1 109 9.06E-26 T 13-10-2018 P40_19625 aa7c6a3ffcb8ba6a574865d93607993f 478 SUPERFAMILY SSF109604 290 477 4.71E-53 T 13-10-2018 P40_19625 aa7c6a3ffcb8ba6a574865d93607993f 478 Gene3D G3DSA:3.30.420.150 93 272 6.9E-77 T 13-10-2018 P40_19625 aa7c6a3ffcb8ba6a574865d93607993f 478 Pfam PF02541 Ppx/GppA phosphatase family 2 285 2.4E-75 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 P40_19625 aa7c6a3ffcb8ba6a574865d93607993f 478 Pfam PF01966 HD domain 317 422 3.0E-7 T 13-10-2018 IPR006674 HD domain P40_19625 aa7c6a3ffcb8ba6a574865d93607993f 478 Gene3D G3DSA:1.10.3210.10 287 477 1.7E-66 T 13-10-2018 P40_19625 aa7c6a3ffcb8ba6a574865d93607993f 478 PIRSF PIRSF001267 1 478 3.1E-182 T 13-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 P40_19625 aa7c6a3ffcb8ba6a574865d93607993f 478 SUPERFAMILY SSF53067 114 287 1.55E-45 T 13-10-2018 P40_19625 aa7c6a3ffcb8ba6a574865d93607993f 478 Gene3D G3DSA:3.30.420.40 1 280 6.9E-77 T 13-10-2018 P40_13265 bb688a8499026e6c0b1047786d2227bd 343 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 7 328 37.553 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 P40_13265 bb688a8499026e6c0b1047786d2227bd 343 SUPERFAMILY SSF52540 49 187 7.6E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_13265 bb688a8499026e6c0b1047786d2227bd 343 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 19 323 4.0E-97 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 P40_13265 bb688a8499026e6c0b1047786d2227bd 343 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 37 322 3.3E-70 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 P40_20710 74b927bab40f2bfcf8c2d29a48a2856c 423 Gene3D G3DSA:3.40.640.10 1 284 1.3E-103 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_20710 74b927bab40f2bfcf8c2d29a48a2856c 423 SUPERFAMILY SSF53383 1 421 3.59E-128 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_20710 74b927bab40f2bfcf8c2d29a48a2856c 423 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 P40_20710 74b927bab40f2bfcf8c2d29a48a2856c 423 PIRSF PIRSF001434 1 423 2.1E-132 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 P40_20710 74b927bab40f2bfcf8c2d29a48a2856c 423 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 6.3E-200 T 13-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 P40_20710 74b927bab40f2bfcf8c2d29a48a2856c 423 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 8.8E-142 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 P40_20710 74b927bab40f2bfcf8c2d29a48a2856c 423 Gene3D G3DSA:3.90.1150.10 288 423 4.5E-50 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_01025 693f98d763ffe659bcec76aaee2834f1 332 Gene3D G3DSA:3.40.50.720 123 266 3.5E-87 T 13-10-2018 P40_01025 693f98d763ffe659bcec76aaee2834f1 332 SUPERFAMILY SSF51735 113 277 5.32E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_01025 693f98d763ffe659bcec76aaee2834f1 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 92 1.1E-8 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P40_01025 693f98d763ffe659bcec76aaee2834f1 332 SUPERFAMILY SSF50129 1 136 7.15E-33 T 13-10-2018 IPR011032 GroES-like superfamily P40_01025 693f98d763ffe659bcec76aaee2834f1 332 SMART SM00829 10 329 3.4E-27 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P40_01025 693f98d763ffe659bcec76aaee2834f1 332 Gene3D G3DSA:3.90.180.10 14 325 3.5E-87 T 13-10-2018 P40_01025 693f98d763ffe659bcec76aaee2834f1 332 Pfam PF00107 Zinc-binding dehydrogenase 150 283 9.4E-29 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 P40_10405 da42139a60ccb91731c17d75fd39fc0a 531 TIGRFAM TIGR02262 benz_CoA_lig: benzoate-CoA ligase family 18 525 1.1E-216 T 13-10-2018 IPR011957 Benzoate-CoA ligase family GO:0005524|GO:0016405 P40_10405 da42139a60ccb91731c17d75fd39fc0a 531 Gene3D G3DSA:3.30.300.310 426 529 4.8E-29 T 13-10-2018 P40_10405 da42139a60ccb91731c17d75fd39fc0a 531 SUPERFAMILY SSF56801 15 527 3.79E-146 T 13-10-2018 P40_10405 da42139a60ccb91731c17d75fd39fc0a 531 Pfam PF13193 AMP-binding enzyme C-terminal domain 439 517 8.9E-19 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_10405 da42139a60ccb91731c17d75fd39fc0a 531 Pfam PF00501 AMP-binding enzyme 34 430 5.2E-92 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_10405 da42139a60ccb91731c17d75fd39fc0a 531 Gene3D G3DSA:3.40.50.12780 22 423 4.3E-124 T 13-10-2018 P40_06650 d51e99c2ff72ee16cd16eefab04183b6 234 SUPERFAMILY SSF75217 3 186 1.77E-44 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases P40_06650 d51e99c2ff72ee16cd16eefab04183b6 234 Pfam PF12105 SpoU, rRNA methylase, C-terminal 164 214 8.3E-22 T 13-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 P40_06650 d51e99c2ff72ee16cd16eefab04183b6 234 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 195 36.649 T 13-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 P40_06650 d51e99c2ff72ee16cd16eefab04183b6 234 Pfam PF00588 SpoU rRNA Methylase family 20 158 4.9E-30 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 P40_06650 d51e99c2ff72ee16cd16eefab04183b6 234 Gene3D G3DSA:3.40.1280.10 1 199 2.2E-57 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal P40_04805 7ee967977435ea4e13d2a20d33abd760 352 SUPERFAMILY SSF51206 10 115 3.8E-14 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like P40_04805 7ee967977435ea4e13d2a20d33abd760 352 SUPERFAMILY SSF52821 246 336 2.62E-16 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_04805 7ee967977435ea4e13d2a20d33abd760 352 Gene3D G3DSA:2.60.120.10 128 258 6.3E-33 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_04805 7ee967977435ea4e13d2a20d33abd760 352 SMART SM00450 255 344 6.7E-4 T 13-10-2018 IPR001763 Rhodanese-like domain P40_04805 7ee967977435ea4e13d2a20d33abd760 352 Pfam PF00027 Cyclic nucleotide-binding domain 162 247 4.0E-21 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_04805 7ee967977435ea4e13d2a20d33abd760 352 Pfam PF00581 Rhodanese-like domain 258 336 8.2E-5 T 13-10-2018 IPR001763 Rhodanese-like domain P40_04805 7ee967977435ea4e13d2a20d33abd760 352 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 170 186 - T 13-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site P40_04805 7ee967977435ea4e13d2a20d33abd760 352 Gene3D G3DSA:2.60.120.10 11 120 6.7E-11 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_04805 7ee967977435ea4e13d2a20d33abd760 352 SUPERFAMILY SSF51206 131 248 3.67E-26 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like P40_04805 7ee967977435ea4e13d2a20d33abd760 352 Gene3D G3DSA:3.40.250.10 259 342 1.7E-12 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_04805 7ee967977435ea4e13d2a20d33abd760 352 PRINTS PR00103 cAMP-dependent protein kinase signature 208 217 8.7E-7 T 13-10-2018 P40_04805 7ee967977435ea4e13d2a20d33abd760 352 PRINTS PR00103 cAMP-dependent protein kinase signature 164 178 8.7E-7 T 13-10-2018 P40_04805 7ee967977435ea4e13d2a20d33abd760 352 PRINTS PR00103 cAMP-dependent protein kinase signature 179 193 8.7E-7 T 13-10-2018 P40_04805 7ee967977435ea4e13d2a20d33abd760 352 PRINTS PR00103 cAMP-dependent protein kinase signature 220 231 8.7E-7 T 13-10-2018 P40_04805 7ee967977435ea4e13d2a20d33abd760 352 SMART SM00100 143 260 1.2E-20 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_09920 46a02bc144ba38d875c62e908a4e3d20 354 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 36 214 1.7E-27 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_09920 46a02bc144ba38d875c62e908a4e3d20 354 Gene3D G3DSA:1.10.10.60 239 348 1.0E-19 T 13-10-2018 P40_09920 46a02bc144ba38d875c62e908a4e3d20 354 SMART SM00342 259 341 1.1E-14 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_09920 46a02bc144ba38d875c62e908a4e3d20 354 Pfam PF12833 Helix-turn-helix domain 266 342 7.4E-15 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_09920 46a02bc144ba38d875c62e908a4e3d20 354 SUPERFAMILY SSF46689 298 344 8.96E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_01240 929ba35377f592089d25929ccf738c03 290 SUPERFAMILY SSF53850 88 287 1.55E-49 T 13-10-2018 P40_01240 929ba35377f592089d25929ccf738c03 290 Pfam PF03466 LysR substrate binding domain 88 286 2.9E-47 T 13-10-2018 IPR005119 LysR, substrate-binding P40_01240 929ba35377f592089d25929ccf738c03 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.3E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_01240 929ba35377f592089d25929ccf738c03 290 SUPERFAMILY SSF46785 3 112 1.25E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_01240 929ba35377f592089d25929ccf738c03 290 Gene3D G3DSA:3.40.190.290 91 289 7.6E-67 T 13-10-2018 P40_01240 929ba35377f592089d25929ccf738c03 290 Gene3D G3DSA:1.10.10.10 3 89 7.0E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_16815 f92738ff220566b5133d9726f73258a7 157 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 143 1.5E-44 T 13-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 P40_16815 f92738ff220566b5133d9726f73258a7 157 SUPERFAMILY SSF55804 1 143 3.53E-37 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 P40_16815 f92738ff220566b5133d9726f73258a7 157 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 143 3.8E-35 T 13-10-2018 IPR002178 PTS EIIA type-2 domain P40_16815 f92738ff220566b5133d9726f73258a7 157 Gene3D G3DSA:3.40.930.10 1 153 3.6E-49 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 232 264 - T 13-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 21 430 40.436 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 PRINTS PR00083 Histidinol dehydrogenase signature 173 199 9.3E-83 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 PRINTS PR00083 Histidinol dehydrogenase signature 254 273 9.3E-83 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 PRINTS PR00083 Histidinol dehydrogenase signature 323 348 9.3E-83 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 PRINTS PR00083 Histidinol dehydrogenase signature 203 228 9.3E-83 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 PRINTS PR00083 Histidinol dehydrogenase signature 364 382 9.3E-83 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 PRINTS PR00083 Histidinol dehydrogenase signature 139 165 9.3E-83 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 PRINTS PR00083 Histidinol dehydrogenase signature 35 59 9.3E-83 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 PRINTS PR00083 Histidinol dehydrogenase signature 232 253 9.3E-83 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 PIRSF PIRSF000099 6 433 4.8E-157 T 13-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 Pfam PF00815 Histidinol dehydrogenase 25 429 4.0E-167 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 SUPERFAMILY SSF53720 26 430 1.29E-85 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 Gene3D G3DSA:3.40.50.1980 236 352 4.5E-127 T 13-10-2018 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 429 3.8E-159 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 P40_16750 191d556450e7a7babbd2ba5be6578f65 433 Gene3D G3DSA:3.40.50.1980 32 234 4.5E-127 T 13-10-2018 P40_17990 4f82c05010fe20c0a4ef232068bdeae4 276 SUPERFAMILY SSF51735 2 244 8.11E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_17990 4f82c05010fe20c0a4ef232068bdeae4 276 Pfam PF00106 short chain dehydrogenase 7 200 6.6E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_17990 4f82c05010fe20c0a4ef232068bdeae4 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 6.6E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_17990 4f82c05010fe20c0a4ef232068bdeae4 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.6E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_17990 4f82c05010fe20c0a4ef232068bdeae4 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 6.6E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_17990 4f82c05010fe20c0a4ef232068bdeae4 276 Gene3D G3DSA:3.40.50.720 1 275 3.7E-64 T 13-10-2018 P40_18890 5188357aa14b99e6bc97117da947b9ab 435 SUPERFAMILY SSF103473 24 427 7.98E-31 T 13-10-2018 IPR036259 MFS transporter superfamily P40_18890 5188357aa14b99e6bc97117da947b9ab 435 Pfam PF07690 Major Facilitator Superfamily 29 339 9.7E-17 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_18890 5188357aa14b99e6bc97117da947b9ab 435 Gene3D G3DSA:1.20.1250.20 17 417 2.3E-23 T 13-10-2018 P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 Gene3D G3DSA:2.40.30.10 578 696 1.1E-37 T 13-10-2018 P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 SUPERFAMILY SSF46955 3 51 6.96E-10 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 SUPERFAMILY SSF50447 581 661 6.24E-22 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 SUPERFAMILY SSF52540 403 574 2.76E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 Gene3D G3DSA:3.40.50.10050 700 807 7.6E-36 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 323 904 5.5E-256 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 Gene3D G3DSA:3.40.50.300 404 577 1.6E-70 T 13-10-2018 P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 Pfam PF00009 Elongation factor Tu GTP binding domain 410 567 1.1E-33 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 327 377 2.2E-15 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 Gene3D G3DSA:3.30.56.50 2 51 9.7E-11 T 13-10-2018 P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 904 17.25 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 SUPERFAMILY SSF52156 683 813 4.18E-36 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 99 6.4E-17 T 13-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 ProSitePatterns PS01176 Initiation factor 2 signature. 857 879 - T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 Pfam PF11987 Translation-initiation factor 2 691 796 5.6E-35 T 13-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 SUPERFAMILY SSF50447 808 904 2.16E-32 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 409 565 8.5E-33 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P40_18665 256dbdd8e90e107ee70ece35382fe40f 906 Gene3D G3DSA:2.40.30.10 808 905 3.7E-33 T 13-10-2018 P40_03415 8f2d053bb53fb6db40b0896765f09f20 361 SUPERFAMILY SSF53800 16 341 2.62E-111 T 13-10-2018 P40_03415 8f2d053bb53fb6db40b0896765f09f20 361 ProSitePatterns PS00534 Ferrochelatase signature. 205 223 - T 13-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 P40_03415 8f2d053bb53fb6db40b0896765f09f20 361 Gene3D G3DSA:3.40.50.1400 18 336 1.1E-99 T 13-10-2018 P40_03415 8f2d053bb53fb6db40b0896765f09f20 361 Pfam PF00762 Ferrochelatase 16 336 9.6E-116 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 P40_03415 8f2d053bb53fb6db40b0896765f09f20 361 Gene3D G3DSA:3.40.50.1400 179 317 1.1E-99 T 13-10-2018 P40_03415 8f2d053bb53fb6db40b0896765f09f20 361 TIGRFAM TIGR00109 hemH: ferrochelatase 15 336 1.1E-96 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 P40_03415 8f2d053bb53fb6db40b0896765f09f20 361 Hamap MF_00323 Ferrochelatase [hemH]. 15 336 37.974 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 P40_03815 00eecaa5f71185300d643d52695c0bd5 555 SUPERFAMILY SSF52540 327 518 1.19E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03815 00eecaa5f71185300d643d52695c0bd5 555 Gene3D G3DSA:3.40.50.300 2 285 5.3E-84 T 13-10-2018 P40_03815 00eecaa5f71185300d643d52695c0bd5 555 SUPERFAMILY SSF52540 8 236 2.57E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03815 00eecaa5f71185300d643d52695c0bd5 555 SMART SM00382 348 524 6.8E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_03815 00eecaa5f71185300d643d52695c0bd5 555 SMART SM00382 31 236 4.9E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_03815 00eecaa5f71185300d643d52695c0bd5 555 Pfam PF12848 ABC transporter 230 304 2.1E-11 T 13-10-2018 IPR032781 ABC-transporter extension domain P40_03815 00eecaa5f71185300d643d52695c0bd5 555 Pfam PF00005 ABC transporter 340 473 3.2E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_03815 00eecaa5f71185300d643d52695c0bd5 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_03815 00eecaa5f71185300d643d52695c0bd5 555 Gene3D G3DSA:3.40.50.300 286 555 1.4E-76 T 13-10-2018 P40_03815 00eecaa5f71185300d643d52695c0bd5 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 4.2E-300 T 13-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 P40_03815 00eecaa5f71185300d643d52695c0bd5 555 Pfam PF00005 ABC transporter 22 191 2.1E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_11370 a354f4a53e7c9b62eaa258582590e8c1 147 Pfam PF00075 RNase H 3 140 1.6E-50 T 13-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 P40_11370 a354f4a53e7c9b62eaa258582590e8c1 147 Gene3D G3DSA:3.30.420.10 2 146 1.3E-59 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_11370 a354f4a53e7c9b62eaa258582590e8c1 147 SUPERFAMILY SSF53098 3 142 8.22E-60 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_11370 a354f4a53e7c9b62eaa258582590e8c1 147 Hamap MF_00042 Ribonuclease H [rnhA]. 1 146 34.722 T 13-10-2018 IPR022892 Ribonuclease HI GO:0004523 P40_05190 b340bea5d72ac94259e0f317f2ba10af 291 Gene3D G3DSA:3.30.465.10 201 281 2.7E-28 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 P40_05190 b340bea5d72ac94259e0f317f2ba10af 291 Pfam PF03471 Transporter associated domain 205 280 1.0E-20 T 13-10-2018 IPR005170 Transporter-associated domain P40_05190 b340bea5d72ac94259e0f317f2ba10af 291 SMART SM00116 73 122 1.2 T 13-10-2018 IPR000644 CBS domain P40_05190 b340bea5d72ac94259e0f317f2ba10af 291 SMART SM00116 138 186 10.0 T 13-10-2018 IPR000644 CBS domain P40_05190 b340bea5d72ac94259e0f317f2ba10af 291 SMART SM01091 203 281 2.0E-27 T 13-10-2018 IPR005170 Transporter-associated domain P40_05190 b340bea5d72ac94259e0f317f2ba10af 291 SUPERFAMILY SSF54631 60 200 4.17E-30 T 13-10-2018 P40_05190 b340bea5d72ac94259e0f317f2ba10af 291 SUPERFAMILY SSF56176 202 283 1.23E-21 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 P40_05190 b340bea5d72ac94259e0f317f2ba10af 291 Pfam PF00571 CBS domain 140 186 3.5E-4 T 13-10-2018 IPR000644 CBS domain P40_05190 b340bea5d72ac94259e0f317f2ba10af 291 Pfam PF00571 CBS domain 64 122 5.6E-5 T 13-10-2018 IPR000644 CBS domain P40_05190 b340bea5d72ac94259e0f317f2ba10af 291 Gene3D G3DSA:3.10.580.10 48 200 7.5E-48 T 13-10-2018 P40_13455 0be3e43b1ca21db3c8a9d32ba1273c07 260 Gene3D G3DSA:3.90.226.10 2 260 7.8E-66 T 13-10-2018 P40_13455 0be3e43b1ca21db3c8a9d32ba1273c07 260 SUPERFAMILY SSF52096 2 259 1.71E-67 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_13455 0be3e43b1ca21db3c8a9d32ba1273c07 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 258 3.2E-47 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_20885 ffe3e1f6681b2f02927fb186feb10bac 89 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 82 7.2E-22 T 13-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 P40_20885 ffe3e1f6681b2f02927fb186feb10bac 89 PIRSF PIRSF028784 1 89 1.7E-30 T 13-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 P40_20280 f027bace2d05351bb7b034c95dffe237 569 Gene3D G3DSA:4.10.450.10 43 202 9.9E-181 T 13-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 P40_20280 f027bace2d05351bb7b034c95dffe237 569 Gene3D G3DSA:3.30.410.40 156 475 9.9E-181 T 13-10-2018 P40_20280 f027bace2d05351bb7b034c95dffe237 569 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 87 110 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_20280 f027bace2d05351bb7b034c95dffe237 569 Gene3D G3DSA:1.10.1220.110 102 155 9.9E-181 T 13-10-2018 P40_20280 f027bace2d05351bb7b034c95dffe237 569 SUPERFAMILY SSF54373 296 478 1.18E-57 T 13-10-2018 P40_20280 f027bace2d05351bb7b034c95dffe237 569 TIGRFAM TIGR01810 betA: choline dehydrogenase 11 535 3.2E-235 T 13-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 P40_20280 f027bace2d05351bb7b034c95dffe237 569 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 260 274 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_20280 f027bace2d05351bb7b034c95dffe237 569 Pfam PF05199 GMC oxidoreductase 392 528 5.1E-43 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 P40_20280 f027bace2d05351bb7b034c95dffe237 569 PIRSF PIRSF000137 3 541 6.4E-144 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_20280 f027bace2d05351bb7b034c95dffe237 569 Pfam PF00732 GMC oxidoreductase 11 301 9.2E-91 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_20280 f027bace2d05351bb7b034c95dffe237 569 SUPERFAMILY SSF51905 7 536 5.51E-91 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_20280 f027bace2d05351bb7b034c95dffe237 569 Gene3D G3DSA:3.50.50.60 10 532 9.9E-181 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_20845 ed70b647a7e10c8f447555a07fcf1de9 635 TIGRFAM TIGR04244 nitrous_NosZ_RR: nitrous-oxide reductase, TAT-dependent 18 633 0.0 T 13-10-2018 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084 P40_20845 ed70b647a7e10c8f447555a07fcf1de9 635 Hamap MF_00716 Nitrous-oxide reductase [nosZ]. 2 634 60.3 T 13-10-2018 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084 P40_20845 ed70b647a7e10c8f447555a07fcf1de9 635 Gene3D G3DSA:2.130.10.10 59 514 7.2E-205 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_20845 ed70b647a7e10c8f447555a07fcf1de9 635 SUPERFAMILY SSF50974 63 503 1.31E-133 T 13-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 P40_20845 ed70b647a7e10c8f447555a07fcf1de9 635 SUPERFAMILY SSF49503 506 633 9.13E-36 T 13-10-2018 IPR008972 Cupredoxin P40_20845 ed70b647a7e10c8f447555a07fcf1de9 635 Gene3D G3DSA:2.60.40.420 515 633 4.0E-37 T 13-10-2018 IPR008972 Cupredoxin P40_20845 ed70b647a7e10c8f447555a07fcf1de9 635 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 578 626 - T 13-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 Pfam PF04545 Sigma-70, region 4 561 614 1.6E-18 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 389 614 1.7E-36 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 Gene3D G3DSA:1.10.220.120 4 67 3.8E-28 T 13-10-2018 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 Pfam PF04542 Sigma-70 region 2 393 462 1.8E-21 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 Pfam PF00140 Sigma-70 factor, region 1.2 101 131 3.4E-13 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 Pfam PF04546 Sigma-70, non-essential region 142 362 4.7E-57 T 13-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 Gene3D G3DSA:1.10.10.10 542 627 2.3E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 389 625 4.3E-121 T 13-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 Pfam PF04539 Sigma-70 region 3 472 548 1.5E-31 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 SUPERFAMILY SSF88659 466 539 1.64E-21 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 417 430 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 PRINTS PR00046 Major sigma-70 factor signature 565 577 7.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 PRINTS PR00046 Major sigma-70 factor signature 601 612 7.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 PRINTS PR00046 Major sigma-70 factor signature 441 449 7.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 PRINTS PR00046 Major sigma-70 factor signature 586 601 7.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 PRINTS PR00046 Major sigma-70 factor signature 417 430 7.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 Pfam PF03979 Sigma-70 factor, region 1.1 6 83 6.4E-28 T 13-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 SUPERFAMILY SSF88946 118 460 3.3E-108 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 Gene3D G3DSA:1.10.601.10 116 462 1.1E-132 T 13-10-2018 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 Gene3D G3DSA:1.10.10.10 466 541 1.6E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 SUPERFAMILY SSF88659 523 625 4.8E-26 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 586 612 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_04580 3b7818387f9988a915ec70e37e8b2dc1 629 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 2 626 44.728 T 13-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 P40_13505 9dff1e7dc117e882ca27ddebd41225b9 412 Gene3D G3DSA:3.60.15.10 4 237 5.5E-36 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_13505 9dff1e7dc117e882ca27ddebd41225b9 412 SMART SM00849 22 220 3.6E-16 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_13505 9dff1e7dc117e882ca27ddebd41225b9 412 Gene3D G3DSA:1.25.40.880 257 394 4.7E-31 T 13-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily P40_13505 9dff1e7dc117e882ca27ddebd41225b9 412 SUPERFAMILY SSF56281 8 389 9.94E-84 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_13505 9dff1e7dc117e882ca27ddebd41225b9 412 Pfam PF14863 Alkyl sulfatase dimerisation 259 390 4.2E-34 T 13-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 P40_13505 9dff1e7dc117e882ca27ddebd41225b9 412 Pfam PF00753 Metallo-beta-lactamase superfamily 21 220 8.2E-19 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_00515 fa188d494a5c3f0fdb5ef9da258f7ecb 220 SMART SM00345 12 70 9.5E-20 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_00515 fa188d494a5c3f0fdb5ef9da258f7ecb 220 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 70 2.5E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_00515 fa188d494a5c3f0fdb5ef9da258f7ecb 220 Pfam PF07729 FCD domain 80 202 4.2E-11 T 13-10-2018 IPR011711 GntR, C-terminal P40_00515 fa188d494a5c3f0fdb5ef9da258f7ecb 220 SUPERFAMILY SSF46785 4 74 8.24E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_00515 fa188d494a5c3f0fdb5ef9da258f7ecb 220 SUPERFAMILY SSF48008 76 213 1.8E-10 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_00515 fa188d494a5c3f0fdb5ef9da258f7ecb 220 SMART SM00895 80 206 2.4E-7 T 13-10-2018 IPR011711 GntR, C-terminal P40_00515 fa188d494a5c3f0fdb5ef9da258f7ecb 220 Gene3D G3DSA:1.10.10.10 4 71 7.3E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_00515 fa188d494a5c3f0fdb5ef9da258f7ecb 220 Gene3D G3DSA:1.20.120.530 73 215 8.0E-12 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_17000 fb8491187e80b466ed6605fe47ea8cdd 91 Pfam PF14145 YrhK-like protein 23 78 4.4E-22 T 13-10-2018 IPR025424 YrhK domain P40_17000 fb8491187e80b466ed6605fe47ea8cdd 91 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 19 84 4.0E-15 T 13-10-2018 P40_06515 372a791192fecdf44df35834a767cbf2 1297 Gene3D G3DSA:3.30.1330.10 207 411 1.3E-40 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P40_06515 372a791192fecdf44df35834a767cbf2 1297 SUPERFAMILY SSF55326 214 420 8.37E-62 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P40_06515 372a791192fecdf44df35834a767cbf2 1297 Gene3D G3DSA:1.10.8.750 146 206 8.8E-29 T 13-10-2018 P40_06515 372a791192fecdf44df35834a767cbf2 1297 SUPERFAMILY SSF109736 147 213 1.31E-21 T 13-10-2018 P40_06515 372a791192fecdf44df35834a767cbf2 1297 Gene3D G3DSA:3.90.650.10 805 982 2.5E-28 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P40_06515 372a791192fecdf44df35834a767cbf2 1297 Gene3D G3DSA:3.90.650.10 412 599 1.8E-58 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P40_06515 372a791192fecdf44df35834a767cbf2 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1296 6.6E-102 T 13-10-2018 P40_06515 372a791192fecdf44df35834a767cbf2 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 5 1296 0.0 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P40_06515 372a791192fecdf44df35834a767cbf2 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 20.918 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P40_06515 372a791192fecdf44df35834a767cbf2 1297 SUPERFAMILY SSF56042 823 1034 5.38E-49 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P40_06515 372a791192fecdf44df35834a767cbf2 1297 SUPERFAMILY SSF56042 423 648 7.48E-52 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P40_06515 372a791192fecdf44df35834a767cbf2 1297 Gene3D G3DSA:3.40.50.880 983 1297 1.1E-129 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_06515 372a791192fecdf44df35834a767cbf2 1297 SMART SM01211 1040 1296 3.0E-146 T 13-10-2018 P40_06515 372a791192fecdf44df35834a767cbf2 1297 SUPERFAMILY SSF52317 1038 1296 8.73E-92 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_06515 372a791192fecdf44df35834a767cbf2 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 425 582 2.7E-29 T 13-10-2018 IPR010918 PurM-like, C-terminal domain P40_06515 372a791192fecdf44df35834a767cbf2 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 840 950 1.2E-10 T 13-10-2018 IPR010918 PurM-like, C-terminal domain P40_06515 372a791192fecdf44df35834a767cbf2 1297 SUPERFAMILY SSF82697 1 145 8.37E-43 T 13-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P40_06515 372a791192fecdf44df35834a767cbf2 1297 SUPERFAMILY SSF55326 616 814 1.6E-60 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P40_06515 372a791192fecdf44df35834a767cbf2 1297 Gene3D G3DSA:3.30.1330.10 608 804 1.2E-21 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P40_15475 05c4bdb9d41dce93187027c77732421d 914 Pfam PF00330 Aconitase family (aconitate hydratase) 75 585 2.8E-186 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 21 914 0.0 T 13-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 P40_15475 05c4bdb9d41dce93187027c77732421d 914 Gene3D G3DSA:3.30.499.20 8 377 1.8E-164 T 13-10-2018 P40_15475 05c4bdb9d41dce93187027c77732421d 914 Gene3D G3DSA:3.20.19.10 675 914 9.2E-107 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 ProSitePatterns PS01244 Aconitase family signature 2. 516 529 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 SUPERFAMILY SSF53732 8 649 6.02E-229 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 Pfam PF00694 Aconitase C-terminal domain 714 841 2.4E-47 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 PRINTS PR00415 Aconitase family signature 207 220 7.1E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 PRINTS PR00415 Aconitase family signature 283 296 7.1E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 PRINTS PR00415 Aconitase family signature 297 310 7.1E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 PRINTS PR00415 Aconitase family signature 454 465 7.1E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 PRINTS PR00415 Aconitase family signature 516 529 7.1E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 PRINTS PR00415 Aconitase family signature 149 162 7.1E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 PRINTS PR00415 Aconitase family signature 221 236 7.1E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 PRINTS PR00415 Aconitase family signature 173 181 7.1E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 PRINTS PR00415 Aconitase family signature 377 391 7.1E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 Gene3D G3DSA:3.30.499.10 378 613 1.5E-102 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 ProSitePatterns PS00450 Aconitase family signature 1. 450 466 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 P40_15475 05c4bdb9d41dce93187027c77732421d 914 SUPERFAMILY SSF52016 653 913 1.63E-90 T 13-10-2018 P40_15475 05c4bdb9d41dce93187027c77732421d 914 Gene3D G3DSA:1.10.1440.20 614 673 8.5E-20 T 13-10-2018 P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 SMART SM00450 259 353 3.6E-13 T 13-10-2018 IPR001763 Rhodanese-like domain P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 Pfam PF00581 Rhodanese-like domain 266 346 3.8E-10 T 13-10-2018 IPR001763 Rhodanese-like domain P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 Gene3D G3DSA:3.40.250.10 260 348 2.5E-16 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 SUPERFAMILY SSF51206 8 126 3.54E-16 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 SMART SM00100 16 132 0.0023 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 SMART SM00100 148 270 4.7E-15 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 Pfam PF00027 Cyclic nucleotide-binding domain 167 253 3.9E-20 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 Pfam PF00027 Cyclic nucleotide-binding domain 36 108 1.4E-9 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 SUPERFAMILY SSF51206 142 254 7.73E-28 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 SUPERFAMILY SSF52821 253 346 2.49E-19 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 Gene3D G3DSA:2.60.120.10 5 130 4.9E-14 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 PRINTS PR00103 cAMP-dependent protein kinase signature 169 183 2.4E-6 T 13-10-2018 P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 PRINTS PR00103 cAMP-dependent protein kinase signature 215 224 2.4E-6 T 13-10-2018 P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 PRINTS PR00103 cAMP-dependent protein kinase signature 227 238 2.4E-6 T 13-10-2018 P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 PRINTS PR00103 cAMP-dependent protein kinase signature 184 198 2.4E-6 T 13-10-2018 P40_08595 7e97db4de2758afa7d0e3535f0ce2198 356 Gene3D G3DSA:2.60.120.10 131 259 3.1E-30 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_11610 a3d7183ca6e749510bcca46940502590 403 Gene3D G3DSA:2.40.110.10 134 255 2.4E-40 T 13-10-2018 P40_11610 a3d7183ca6e749510bcca46940502590 403 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 237 8.9E-24 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_11610 a3d7183ca6e749510bcca46940502590 403 PIRSF PIRSF016578 237 399 3.9E-14 T 13-10-2018 P40_11610 a3d7183ca6e749510bcca46940502590 403 PIRSF PIRSF016578 51 210 1.8E-5 T 13-10-2018 P40_11610 a3d7183ca6e749510bcca46940502590 403 Gene3D G3DSA:1.10.540.10 18 133 2.3E-32 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_11610 a3d7183ca6e749510bcca46940502590 403 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 23 131 6.4E-29 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_11610 a3d7183ca6e749510bcca46940502590 403 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 252 398 2.1E-49 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_11610 a3d7183ca6e749510bcca46940502590 403 Gene3D G3DSA:1.20.140.10 256 403 9.5E-55 T 13-10-2018 P40_11610 a3d7183ca6e749510bcca46940502590 403 SUPERFAMILY SSF47203 247 400 4.35E-56 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_11610 a3d7183ca6e749510bcca46940502590 403 SUPERFAMILY SSF56645 19 259 1.14E-71 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_11610 a3d7183ca6e749510bcca46940502590 403 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 356 375 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_12335 9f8ef7e8212d59b6009ee5cedf7ac4e0 382 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 23 34 - T 13-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 P40_12335 9f8ef7e8212d59b6009ee5cedf7ac4e0 382 Pfam PF13186 Iron-sulfur cluster-binding domain 250 315 3.2E-10 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain P40_12335 9f8ef7e8212d59b6009ee5cedf7ac4e0 382 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 14 371 7.2E-179 T 13-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 P40_12335 9f8ef7e8212d59b6009ee5cedf7ac4e0 382 PIRSF PIRSF037420 5 361 1.2E-125 T 13-10-2018 IPR017200 Coenzyme PQQ synthesis protein E P40_12335 9f8ef7e8212d59b6009ee5cedf7ac4e0 382 Pfam PF04055 Radical SAM superfamily 23 176 1.3E-20 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P40_12335 9f8ef7e8212d59b6009ee5cedf7ac4e0 382 Pfam PF13394 4Fe-4S single cluster domain 26 89 2.4E-6 T 13-10-2018 P40_12335 9f8ef7e8212d59b6009ee5cedf7ac4e0 382 SUPERFAMILY SSF102114 15 324 1.06E-72 T 13-10-2018 P40_12335 9f8ef7e8212d59b6009ee5cedf7ac4e0 382 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 253 342 3.7E-8 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain P40_12335 9f8ef7e8212d59b6009ee5cedf7ac4e0 382 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 382 188.104 T 13-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 P40_12335 9f8ef7e8212d59b6009ee5cedf7ac4e0 382 Gene3D G3DSA:3.20.20.70 18 302 2.4E-44 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_09300 504d26630517dc70f6e7bc6e58e28bc6 882 SUPERFAMILY SSF82866 235 416 3.66E-25 T 13-10-2018 P40_09300 504d26630517dc70f6e7bc6e58e28bc6 882 PRINTS PR00702 Acriflavin resistance protein family signature 723 746 1.4E-7 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_09300 504d26630517dc70f6e7bc6e58e28bc6 882 PRINTS PR00702 Acriflavin resistance protein family signature 775 799 1.4E-7 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_09300 504d26630517dc70f6e7bc6e58e28bc6 882 PRINTS PR00702 Acriflavin resistance protein family signature 364 388 1.4E-7 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_09300 504d26630517dc70f6e7bc6e58e28bc6 882 PRINTS PR00702 Acriflavin resistance protein family signature 850 873 1.4E-7 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_09300 504d26630517dc70f6e7bc6e58e28bc6 882 Pfam PF03176 MMPL family 655 874 4.5E-23 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 P40_09300 504d26630517dc70f6e7bc6e58e28bc6 882 Pfam PF03176 MMPL family 219 415 5.2E-12 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 P40_09300 504d26630517dc70f6e7bc6e58e28bc6 882 SUPERFAMILY SSF82866 674 879 4.45E-36 T 13-10-2018 P40_09300 504d26630517dc70f6e7bc6e58e28bc6 882 Gene3D G3DSA:1.20.1640.10 245 422 5.1E-7 T 13-10-2018 P40_09300 504d26630517dc70f6e7bc6e58e28bc6 882 Gene3D G3DSA:1.20.1640.10 699 880 5.0E-16 T 13-10-2018 P40_20875 d5914ef126622f0c0397650d2bcd34e1 211 Gene3D G3DSA:3.40.50.300 7 207 6.9E-53 T 13-10-2018 P40_20875 d5914ef126622f0c0397650d2bcd34e1 211 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 18 201 27.013 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 P40_20875 d5914ef126622f0c0397650d2bcd34e1 211 Pfam PF01926 50S ribosome-binding GTPase 32 150 4.7E-19 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_20875 d5914ef126622f0c0397650d2bcd34e1 211 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 14 197 3.3E-73 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 P40_20875 d5914ef126622f0c0397650d2bcd34e1 211 SUPERFAMILY SSF52540 18 201 3.88E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_19615 98211715a9c6ad81bb9b2539b665e6ab 694 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 17 689 9.4E-291 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 P40_19615 98211715a9c6ad81bb9b2539b665e6ab 694 Pfam PF13090 Polyphosphate kinase C-terminal domain 340 688 9.7E-152 T 13-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 P40_19615 98211715a9c6ad81bb9b2539b665e6ab 694 Gene3D G3DSA:3.30.870.10 327 509 3.7E-70 T 13-10-2018 P40_19615 98211715a9c6ad81bb9b2539b665e6ab 694 SUPERFAMILY SSF143724 121 323 6.47E-64 T 13-10-2018 P40_19615 98211715a9c6ad81bb9b2539b665e6ab 694 Hamap MF_00347 Polyphosphate kinase [ppk]. 15 693 28.477 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 P40_19615 98211715a9c6ad81bb9b2539b665e6ab 694 Gene3D G3DSA:3.30.870.10 510 693 1.3E-67 T 13-10-2018 P40_19615 98211715a9c6ad81bb9b2539b665e6ab 694 PIRSF PIRSF015589 1 694 2.9E-277 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 P40_19615 98211715a9c6ad81bb9b2539b665e6ab 694 SUPERFAMILY SSF140356 14 119 2.22E-38 T 13-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 P40_19615 98211715a9c6ad81bb9b2539b665e6ab 694 SUPERFAMILY SSF56024 511 691 4.71E-72 T 13-10-2018 P40_19615 98211715a9c6ad81bb9b2539b665e6ab 694 Pfam PF13089 Polyphosphate kinase N-terminal domain 18 123 1.1E-36 T 13-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 P40_19615 98211715a9c6ad81bb9b2539b665e6ab 694 Pfam PF02503 Polyphosphate kinase middle domain 133 331 4.6E-62 T 13-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 P40_19615 98211715a9c6ad81bb9b2539b665e6ab 694 SUPERFAMILY SSF56024 324 507 5.1E-56 T 13-10-2018 P40_19615 98211715a9c6ad81bb9b2539b665e6ab 694 Gene3D G3DSA:3.30.1840.10 11 322 5.7E-104 T 13-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 P40_11630 d1fd55aa5c621d4e169f91fa8ad14bca 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 124 3.6E-18 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_11630 d1fd55aa5c621d4e169f91fa8ad14bca 382 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_11630 d1fd55aa5c621d4e169f91fa8ad14bca 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 379 9.2E-7 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_11630 d1fd55aa5c621d4e169f91fa8ad14bca 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 222 3.3E-18 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_11630 d1fd55aa5c621d4e169f91fa8ad14bca 382 SUPERFAMILY SSF56645 9 246 5.5E-60 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_11630 d1fd55aa5c621d4e169f91fa8ad14bca 382 SUPERFAMILY SSF47203 236 377 6.66E-6 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_11630 d1fd55aa5c621d4e169f91fa8ad14bca 382 Gene3D G3DSA:1.20.140.10 240 382 1.4E-13 T 13-10-2018 P40_11630 d1fd55aa5c621d4e169f91fa8ad14bca 382 Gene3D G3DSA:2.40.110.10 129 239 1.5E-32 T 13-10-2018 P40_11630 d1fd55aa5c621d4e169f91fa8ad14bca 382 Gene3D G3DSA:1.10.540.10 5 126 3.1E-22 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_00615 79260e3cdcb6e750a9a0878393a771ec 394 Gene3D G3DSA:3.40.47.10 7 291 1.4E-141 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_00615 79260e3cdcb6e750a9a0878393a771ec 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 1.0E-134 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_00615 79260e3cdcb6e750a9a0878393a771ec 394 Pfam PF00108 Thiolase, N-terminal domain 6 264 1.6E-68 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 P40_00615 79260e3cdcb6e750a9a0878393a771ec 394 SUPERFAMILY SSF53901 2 267 2.06E-70 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_00615 79260e3cdcb6e750a9a0878393a771ec 394 Gene3D G3DSA:3.40.47.10 126 387 1.4E-141 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_00615 79260e3cdcb6e750a9a0878393a771ec 394 SUPERFAMILY SSF53901 269 394 3.34E-40 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_00615 79260e3cdcb6e750a9a0878393a771ec 394 PIRSF PIRSF000429 1 394 2.2E-121 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_00615 79260e3cdcb6e750a9a0878393a771ec 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 P40_00615 79260e3cdcb6e750a9a0878393a771ec 394 Pfam PF02803 Thiolase, C-terminal domain 271 393 3.7E-42 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_13570 66a083a6683453da97e03f35935bafad 347 SUPERFAMILY SSF56042 172 338 1.2E-61 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P40_13570 66a083a6683453da97e03f35935bafad 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 331 4.1E-37 T 13-10-2018 IPR010918 PurM-like, C-terminal domain P40_13570 66a083a6683453da97e03f35935bafad 347 Gene3D G3DSA:3.30.1330.10 8 171 5.2E-65 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P40_13570 66a083a6683453da97e03f35935bafad 347 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 342 47.28 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P40_13570 66a083a6683453da97e03f35935bafad 347 Gene3D G3DSA:3.90.650.10 172 342 7.1E-69 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P40_13570 66a083a6683453da97e03f35935bafad 347 SUPERFAMILY SSF55326 8 170 3.14E-51 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P40_13570 66a083a6683453da97e03f35935bafad 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 61 165 4.6E-15 T 13-10-2018 IPR016188 PurM-like, N-terminal domain P40_13570 66a083a6683453da97e03f35935bafad 347 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 332 4.0E-143 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P40_00920 7aa5a07192f9bea905addead37984077 150 SUPERFAMILY SSF51283 4 149 2.88E-53 T 13-10-2018 IPR036157 dUTPase-like superfamily P40_00920 7aa5a07192f9bea905addead37984077 150 Pfam PF00692 dUTPase 15 148 8.2E-39 T 13-10-2018 IPR029054 dUTPase-like P40_00920 7aa5a07192f9bea905addead37984077 150 Gene3D G3DSA:2.70.40.10 1 149 3.3E-52 T 13-10-2018 IPR036157 dUTPase-like superfamily P40_00920 7aa5a07192f9bea905addead37984077 150 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 149 33.641 T 13-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 P40_00920 7aa5a07192f9bea905addead37984077 150 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 149 1.4E-48 T 13-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 P40_14100 467ed758d5bd54c154fe1b586cae52d2 259 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 33 210 2.5E-36 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal P40_14100 467ed758d5bd54c154fe1b586cae52d2 259 Gene3D G3DSA:3.40.225.10 15 251 5.7E-51 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily P40_14100 467ed758d5bd54c154fe1b586cae52d2 259 SMART SM01007 32 210 3.4E-42 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal P40_14100 467ed758d5bd54c154fe1b586cae52d2 259 SUPERFAMILY SSF53639 27 235 3.14E-54 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily P40_13730 f72e20e093bc2bc25c0fd56f7f438f42 635 Gene3D G3DSA:3.60.21.70 276 543 6.7E-9 T 13-10-2018 IPR038607 PhoD-like superfamily P40_13730 f72e20e093bc2bc25c0fd56f7f438f42 635 Pfam PF09423 PhoD-like phosphatase 292 543 8.1E-7 T 13-10-2018 IPR018946 Alkaline phosphatase D-related P40_13730 f72e20e093bc2bc25c0fd56f7f438f42 635 SUPERFAMILY SSF56300 150 549 1.9E-10 T 13-10-2018 P40_15820 a0f4decf93a18ea1cc4d720249bceb7b 393 Pfam PF00108 Thiolase, N-terminal domain 6 263 1.4E-87 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 P40_15820 a0f4decf93a18ea1cc4d720249bceb7b 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 391 2.0E-130 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_15820 a0f4decf93a18ea1cc4d720249bceb7b 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 2.1E-42 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_15820 a0f4decf93a18ea1cc4d720249bceb7b 393 SUPERFAMILY SSF53901 271 392 9.77E-41 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_15820 a0f4decf93a18ea1cc4d720249bceb7b 393 Gene3D G3DSA:3.40.47.10 128 390 6.9E-142 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_15820 a0f4decf93a18ea1cc4d720249bceb7b 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 P40_15820 a0f4decf93a18ea1cc4d720249bceb7b 393 PIRSF PIRSF000429 1 393 1.3E-113 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_15820 a0f4decf93a18ea1cc4d720249bceb7b 393 SUPERFAMILY SSF53901 6 270 8.52E-82 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_15820 a0f4decf93a18ea1cc4d720249bceb7b 393 Gene3D G3DSA:3.40.47.10 7 276 6.9E-142 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_00930 a3792daeada4512d1ae0ab2e0836078b 224 SUPERFAMILY SSF47781 17 90 7.45E-6 T 13-10-2018 IPR010994 RuvA domain 2-like P40_00930 a3792daeada4512d1ae0ab2e0836078b 224 Pfam PF04002 RadC-like JAB domain 104 218 1.0E-40 T 13-10-2018 IPR025657 RadC-like JAB domain P40_00930 a3792daeada4512d1ae0ab2e0836078b 224 SUPERFAMILY SSF102712 119 191 2.75E-5 T 13-10-2018 P40_00930 a3792daeada4512d1ae0ab2e0836078b 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site P40_00930 a3792daeada4512d1ae0ab2e0836078b 224 Gene3D G3DSA:3.40.140.10 100 222 2.8E-40 T 13-10-2018 P40_00930 a3792daeada4512d1ae0ab2e0836078b 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 9.0E-71 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 P40_03665 9390f2c3a60ebc7b6c800b7dbd5aa052 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 13-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 P40_03665 9390f2c3a60ebc7b6c800b7dbd5aa052 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 13-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 P40_03665 9390f2c3a60ebc7b6c800b7dbd5aa052 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 2.4E-187 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 P40_03665 9390f2c3a60ebc7b6c800b7dbd5aa052 430 Gene3D G3DSA:3.90.170.10 267 430 3.9E-67 T 13-10-2018 P40_03665 9390f2c3a60ebc7b6c800b7dbd5aa052 430 Pfam PF00709 Adenylosuccinate synthetase 5 423 4.4E-179 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 P40_03665 9390f2c3a60ebc7b6c800b7dbd5aa052 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 214.743 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 P40_03665 9390f2c3a60ebc7b6c800b7dbd5aa052 430 Gene3D G3DSA:1.10.300.10 102 201 4.2E-102 T 13-10-2018 P40_03665 9390f2c3a60ebc7b6c800b7dbd5aa052 430 SUPERFAMILY SSF52540 3 429 3.29E-177 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03665 9390f2c3a60ebc7b6c800b7dbd5aa052 430 SMART SM00788 4 424 2.3E-297 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 P40_03665 9390f2c3a60ebc7b6c800b7dbd5aa052 430 Gene3D G3DSA:3.40.440.10 6 249 4.2E-102 T 13-10-2018 P40_00795 9731b379bb25404b6d5e5ed07400959b 128 SUPERFAMILY SSF55298 5 125 8.33E-45 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 P40_00795 9731b379bb25404b6d5e5ed07400959b 128 Gene3D G3DSA:3.30.1330.40 2 127 1.6E-51 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 P40_00795 9731b379bb25404b6d5e5ed07400959b 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 5 124 3.3E-50 T 13-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 P40_00795 9731b379bb25404b6d5e5ed07400959b 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 13-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 P40_00795 9731b379bb25404b6d5e5ed07400959b 128 Pfam PF01042 Endoribonuclease L-PSP 10 125 1.4E-41 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 P40_21620 d0f5bab6742953f915180b2868e13ab2 193 Gene3D G3DSA:1.10.260.80 19 70 7.4E-53 T 13-10-2018 P40_21620 d0f5bab6742953f915180b2868e13ab2 193 Gene3D G3DSA:3.40.50.1000 9 184 7.4E-53 T 13-10-2018 IPR023214 HAD superfamily P40_21620 d0f5bab6742953f915180b2868e13ab2 193 SUPERFAMILY SSF56784 7 193 8.67E-40 T 13-10-2018 IPR036412 HAD-like superfamily P40_21620 d0f5bab6742953f915180b2868e13ab2 193 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 8 161 2.1E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_21620 d0f5bab6742953f915180b2868e13ab2 193 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 164 1.1E-20 T 13-10-2018 P40_21620 d0f5bab6742953f915180b2868e13ab2 193 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 8 164 1.3E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_15195 587664e2cb1544c66043c7818505ea00 599 SUPERFAMILY SSF52540 6 189 1.5E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_15195 587664e2cb1544c66043c7818505ea00 599 Gene3D G3DSA:3.40.50.300 1 200 3.8E-78 T 13-10-2018 P40_15195 587664e2cb1544c66043c7818505ea00 599 Gene3D G3DSA:1.10.150.80 520 599 6.4E-23 T 13-10-2018 P40_15195 587664e2cb1544c66043c7818505ea00 599 Pfam PF00270 DEAD/DEAH box helicase 21 181 2.1E-19 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 P40_15195 587664e2cb1544c66043c7818505ea00 599 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 455 3.7E-159 T 13-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 P40_15195 587664e2cb1544c66043c7818505ea00 599 Gene3D G3DSA:3.40.50.300 201 333 5.5E-40 T 13-10-2018 P40_15195 587664e2cb1544c66043c7818505ea00 599 SMART SM00956 405 508 5.7E-52 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 P40_15195 587664e2cb1544c66043c7818505ea00 599 Gene3D G3DSA:1.10.10.10 334 519 4.1E-52 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_15195 587664e2cb1544c66043c7818505ea00 599 SUPERFAMILY SSF52540 200 448 2.74E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_15195 587664e2cb1544c66043c7818505ea00 599 Pfam PF16124 RecQ zinc-binding 336 398 1.1E-19 T 13-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain P40_15195 587664e2cb1544c66043c7818505ea00 599 SMART SM00487 14 210 2.8E-28 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_15195 587664e2cb1544c66043c7818505ea00 599 Pfam PF00271 Helicase conserved C-terminal domain 217 323 2.9E-15 T 13-10-2018 IPR001650 Helicase, C-terminal P40_15195 587664e2cb1544c66043c7818505ea00 599 Pfam PF00570 HRDC domain 528 593 1.2E-20 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 P40_15195 587664e2cb1544c66043c7818505ea00 599 SMART SM00490 243 324 9.6E-25 T 13-10-2018 IPR001650 Helicase, C-terminal P40_15195 587664e2cb1544c66043c7818505ea00 599 Pfam PF09382 RQC domain 400 510 6.1E-38 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 P40_15195 587664e2cb1544c66043c7818505ea00 599 SMART SM00341 524 598 4.3E-11 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 P40_15195 587664e2cb1544c66043c7818505ea00 599 SUPERFAMILY SSF47819 526 597 3.71E-23 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 P40_15195 587664e2cb1544c66043c7818505ea00 599 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 595 6.5E-241 T 13-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 P40_20375 03aedc62db52cb246121aae01977b8f5 263 SUPERFAMILY SSF51182 7 183 4.71E-14 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_20375 03aedc62db52cb246121aae01977b8f5 263 Pfam PF12833 Helix-turn-helix domain 181 259 1.2E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_20375 03aedc62db52cb246121aae01977b8f5 263 Gene3D G3DSA:2.60.120.10 11 93 1.7E-9 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_20375 03aedc62db52cb246121aae01977b8f5 263 Pfam PF02311 AraC-like ligand binding domain 34 97 2.3E-6 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 P40_20375 03aedc62db52cb246121aae01977b8f5 263 SMART SM00342 175 257 4.0E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_20375 03aedc62db52cb246121aae01977b8f5 263 SUPERFAMILY SSF46689 211 259 1.03E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_20375 03aedc62db52cb246121aae01977b8f5 263 Gene3D G3DSA:1.10.10.60 160 262 8.4E-24 T 13-10-2018 P40_20375 03aedc62db52cb246121aae01977b8f5 263 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 226 241 1.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_20375 03aedc62db52cb246121aae01977b8f5 263 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 257 1.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_02685 815564fb5eb81b2d01a15c31cefd17e9 414 Gene3D G3DSA:1.20.140.10 248 408 7.3E-37 T 13-10-2018 P40_02685 815564fb5eb81b2d01a15c31cefd17e9 414 SUPERFAMILY SSF47203 245 403 3.22E-42 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_02685 815564fb5eb81b2d01a15c31cefd17e9 414 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 247 396 1.6E-36 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_02685 815564fb5eb81b2d01a15c31cefd17e9 414 SUPERFAMILY SSF56645 2 260 2.23E-62 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_02685 815564fb5eb81b2d01a15c31cefd17e9 414 Gene3D G3DSA:1.10.540.10 1 131 4.0E-41 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_02685 815564fb5eb81b2d01a15c31cefd17e9 414 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 129 4.6E-13 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_02685 815564fb5eb81b2d01a15c31cefd17e9 414 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 217 6.5E-20 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_02685 815564fb5eb81b2d01a15c31cefd17e9 414 Gene3D G3DSA:2.40.110.10 132 247 6.8E-40 T 13-10-2018 P40_09055 0267d6e6ccb8dbb51ccdca1f081135db 821 Gene3D G3DSA:1.10.540.10 127 241 2.6E-94 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_09055 0267d6e6ccb8dbb51ccdca1f081135db 821 Pfam PF09317 Domain of unknown function (DUF1974) 519 806 8.7E-86 T 13-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 P40_09055 0267d6e6ccb8dbb51ccdca1f081135db 821 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 129 238 9.9E-20 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_09055 0267d6e6ccb8dbb51ccdca1f081135db 821 SUPERFAMILY SSF47203 366 510 3.54E-16 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_09055 0267d6e6ccb8dbb51ccdca1f081135db 821 Gene3D G3DSA:2.40.110.10 242 365 2.6E-94 T 13-10-2018 P40_09055 0267d6e6ccb8dbb51ccdca1f081135db 821 SUPERFAMILY SSF56645 124 361 1.83E-49 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_09055 0267d6e6ccb8dbb51ccdca1f081135db 821 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 243 338 4.3E-9 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_09055 0267d6e6ccb8dbb51ccdca1f081135db 821 Gene3D G3DSA:1.20.140.10 366 511 2.6E-94 T 13-10-2018 P40_09055 0267d6e6ccb8dbb51ccdca1f081135db 821 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 366 505 7.7E-8 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_01095 a03a2811094485f5c48894f03c7f0b2a 385 SMART SM00729 7 226 2.8E-54 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 P40_01095 a03a2811094485f5c48894f03c7f0b2a 385 Pfam PF06969 HemN C-terminal domain 308 368 1.0E-10 T 13-10-2018 IPR010723 HemN, C-terminal P40_01095 a03a2811094485f5c48894f03c7f0b2a 385 Pfam PF04055 Radical SAM superfamily 12 179 1.1E-19 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P40_01095 a03a2811094485f5c48894f03c7f0b2a 385 SUPERFAMILY SSF102114 6 377 1.7E-108 T 13-10-2018 P40_01095 a03a2811094485f5c48894f03c7f0b2a 385 Gene3D G3DSA:3.80.30.20 2 307 7.1E-100 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe P40_01095 a03a2811094485f5c48894f03c7f0b2a 385 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 9 341 8.5E-113 T 13-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 P40_07930 43bd9f696d4e6a7f1c71668aee6efe0a 355 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 209 332 4.2E-25 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_07930 43bd9f696d4e6a7f1c71668aee6efe0a 355 SUPERFAMILY SSF56645 14 196 8.19E-20 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_07930 43bd9f696d4e6a7f1c71668aee6efe0a 355 Gene3D G3DSA:2.40.110.10 127 207 5.4E-7 T 13-10-2018 P40_07930 43bd9f696d4e6a7f1c71668aee6efe0a 355 Gene3D G3DSA:1.20.140.10 208 348 1.8E-31 T 13-10-2018 P40_07930 43bd9f696d4e6a7f1c71668aee6efe0a 355 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 92 1.6E-12 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_07930 43bd9f696d4e6a7f1c71668aee6efe0a 355 Gene3D G3DSA:1.10.540.10 9 125 7.7E-20 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_07930 43bd9f696d4e6a7f1c71668aee6efe0a 355 SUPERFAMILY SSF47203 209 345 1.03E-32 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 375 48.628 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 SUPERFAMILY SSF52021 4 142 4.45E-58 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 372 7.2E-150 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 6.9E-54 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 Gene3D G3DSA:3.50.30.20 3 151 3.5E-61 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 SUPERFAMILY SSF52317 154 374 1.42E-61 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_18735 bc0057ee449df95035d96dede8f9e86f 376 PRINTS PR00097 Anthranilate synthase component II signature 233 242 6.6E-5 T 13-10-2018 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 PRINTS PR00097 Anthranilate synthase component II signature 346 359 6.6E-5 T 13-10-2018 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 PRINTS PR00097 Anthranilate synthase component II signature 261 272 6.6E-5 T 13-10-2018 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 233 242 2.1E-10 T 13-10-2018 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 346 359 2.1E-10 T 13-10-2018 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 261 272 2.1E-10 T 13-10-2018 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 Gene3D G3DSA:3.40.50.880 152 375 5.7E-73 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_18735 bc0057ee449df95035d96dede8f9e86f 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 191 205 2.5E-37 T 13-10-2018 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 230 244 2.5E-37 T 13-10-2018 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 261 277 2.5E-37 T 13-10-2018 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 303 314 2.5E-37 T 13-10-2018 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 278 295 2.5E-37 T 13-10-2018 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 SMART SM01097 3 133 6.2E-93 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_18735 bc0057ee449df95035d96dede8f9e86f 376 Pfam PF00117 Glutamine amidotransferase class-I 194 369 4.2E-47 T 13-10-2018 IPR017926 Glutamine amidotransferase P40_04250 1846a20328a364e107e8f149b5d6e239 516 Gene3D G3DSA:1.10.3210.10 195 312 1.4E-17 T 13-10-2018 P40_04250 1846a20328a364e107e8f149b5d6e239 516 SUPERFAMILY SSF109604 196 286 9.11E-10 T 13-10-2018 P40_04250 1846a20328a364e107e8f149b5d6e239 516 Pfam PF13185 GAF domain 24 176 1.8E-11 T 13-10-2018 IPR003018 GAF domain GO:0005515 P40_04250 1846a20328a364e107e8f149b5d6e239 516 Pfam PF13487 HD domain 377 442 3.9E-22 T 13-10-2018 P40_04250 1846a20328a364e107e8f149b5d6e239 516 Gene3D G3DSA:3.30.450.40 4 194 3.8E-24 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_04250 1846a20328a364e107e8f149b5d6e239 516 SMART SM00471 203 460 9.4E-6 T 13-10-2018 IPR003607 HD/PDEase domain P40_04250 1846a20328a364e107e8f149b5d6e239 516 SUPERFAMILY SSF55781 10 187 2.62E-20 T 13-10-2018 P40_04250 1846a20328a364e107e8f149b5d6e239 516 SUPERFAMILY SSF109604 375 490 1.63E-10 T 13-10-2018 P40_04250 1846a20328a364e107e8f149b5d6e239 516 SMART SM00065 26 186 1.3E-5 T 13-10-2018 IPR003018 GAF domain GO:0005515 P40_04250 1846a20328a364e107e8f149b5d6e239 516 Gene3D G3DSA:1.10.3210.10 367 497 6.2E-31 T 13-10-2018 P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 Pfam PF00773 RNB domain 265 598 4.1E-101 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 SMART SM00955 265 600 1.2E-165 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 78 745 1.5E-210 T 13-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 SMART SM00357 90 150 1.0E-9 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 Hamap MF_01895 Ribonuclease R [rnr]. 42 745 52.569 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 ProSitePatterns PS01175 Ribonuclease II family signature. 567 591 - T 13-10-2018 IPR022966 Ribonuclease II/R, conserved site P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 SUPERFAMILY SSF50249 225 662 6.85E-139 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 SMART SM00316 662 745 1.8E-11 T 13-10-2018 IPR022967 RNA-binding domain, S1 P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 Gene3D G3DSA:2.40.50.140 76 153 2.9E-18 T 13-10-2018 P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 SUPERFAMILY SSF50249 155 239 1.62E-9 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 Pfam PF08206 Ribonuclease B OB domain 91 149 2.6E-19 T 13-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 Gene3D G3DSA:2.40.50.140 665 773 9.7E-22 T 13-10-2018 P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 TIGRFAM TIGR02063 RNase_R: ribonuclease R 24 745 3.3E-243 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 SUPERFAMILY SSF50249 71 152 4.41E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 SUPERFAMILY SSF50249 664 744 3.43E-20 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_03710 f44b2a2dd3cf141c8c5b3765d5cbb293 810 Pfam PF00575 S1 RNA binding domain 664 743 3.2E-10 T 13-10-2018 IPR003029 S1 domain GO:0003676 P40_09395 d4154928814ba203ba7055669b85bf8d 375 SMART SM00558 99 223 0.0024 T 13-10-2018 IPR003347 JmjC domain P40_09395 d4154928814ba203ba7055669b85bf8d 375 Pfam PF08007 Cupin superfamily protein 15 315 1.0E-68 T 13-10-2018 IPR003347 JmjC domain P40_09395 d4154928814ba203ba7055669b85bf8d 375 Gene3D G3DSA:2.60.120.650 3 213 1.4E-68 T 13-10-2018 P40_09395 d4154928814ba203ba7055669b85bf8d 375 Gene3D G3DSA:1.10.10.2510 214 373 1.9E-16 T 13-10-2018 P40_09395 d4154928814ba203ba7055669b85bf8d 375 SUPERFAMILY SSF51197 5 295 3.02E-58 T 13-10-2018 P40_14880 eede7fb2e5d014565362748c5def25e5 298 Pfam PF01545 Cation efflux family 127 294 8.9E-11 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 P40_14880 eede7fb2e5d014565362748c5def25e5 298 Gene3D G3DSA:1.20.1510.10 122 296 3.0E-10 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_14880 eede7fb2e5d014565362748c5def25e5 298 SUPERFAMILY SSF161111 118 294 1.7E-30 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_14880 eede7fb2e5d014565362748c5def25e5 298 SUPERFAMILY SSF55008 33 95 1.57E-8 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 P40_20110 a445eb77074634afe0078de5058e1aaa 478 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 1 224 7.3E-22 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain P40_20110 a445eb77074634afe0078de5058e1aaa 478 Gene3D G3DSA:3.40.50.880 247 389 9.9E-16 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_20110 a445eb77074634afe0078de5058e1aaa 478 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 475 202.072 T 13-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 P40_20110 a445eb77074634afe0078de5058e1aaa 478 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 1 467 6.3E-143 T 13-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 P40_20110 a445eb77074634afe0078de5058e1aaa 478 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 245 426 7.9E-55 T 13-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 P40_20110 a445eb77074634afe0078de5058e1aaa 478 Gene3D G3DSA:3.40.50.300 1 229 2.6E-55 T 13-10-2018 P40_20110 a445eb77074634afe0078de5058e1aaa 478 SUPERFAMILY SSF52540 1 232 7.9E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_20110 a445eb77074634afe0078de5058e1aaa 478 SUPERFAMILY SSF52317 246 428 4.73E-38 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_03990 7fa0f17a75a5abd256e796d6df518192 263 Gene3D G3DSA:3.90.226.10 1 205 5.2E-74 T 13-10-2018 P40_03990 7fa0f17a75a5abd256e796d6df518192 263 SUPERFAMILY SSF52096 1 263 5.32E-86 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_03990 7fa0f17a75a5abd256e796d6df518192 263 Gene3D G3DSA:1.10.12.10 206 263 4.0E-28 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_03990 7fa0f17a75a5abd256e796d6df518192 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 262 3.8E-69 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_03990 7fa0f17a75a5abd256e796d6df518192 263 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 P40_03990 7fa0f17a75a5abd256e796d6df518192 263 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 8 263 6.4E-129 T 13-10-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 P40_11595 c08a774683ffa291c28fb85223c46a4b 298 SUPERFAMILY SSF51621 2 243 1.03E-61 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 P40_11595 c08a774683ffa291c28fb85223c46a4b 298 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 233 1.0E-44 T 13-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 P40_11595 c08a774683ffa291c28fb85223c46a4b 298 Gene3D G3DSA:3.20.20.60 1 298 1.3E-102 T 13-10-2018 P40_11595 c08a774683ffa291c28fb85223c46a4b 298 PIRSF PIRSF015582 1 298 4.0E-81 T 13-10-2018 IPR011206 Citrate lyase beta subunit-like P40_19215 51a9b938a0820903ef974e847d72ca25 410 Pfam PF13458 Periplasmic binding protein 41 389 3.2E-65 T 13-10-2018 IPR028081 Leucine-binding protein domain P40_19215 51a9b938a0820903ef974e847d72ca25 410 SUPERFAMILY SSF53822 41 394 4.12E-73 T 13-10-2018 IPR028082 Periplasmic binding protein-like I P40_19215 51a9b938a0820903ef974e847d72ca25 410 Gene3D G3DSA:3.40.50.2300 161 294 1.0E-79 T 13-10-2018 P40_19215 51a9b938a0820903ef974e847d72ca25 410 Gene3D G3DSA:3.40.50.2300 49 375 1.0E-79 T 13-10-2018 P40_16895 e8832e079eb1298c0e39a2eeaca00c12 347 Pfam PF06723 MreB/Mbl protein 13 338 2.0E-147 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P40_16895 e8832e079eb1298c0e39a2eeaca00c12 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-64 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P40_16895 e8832e079eb1298c0e39a2eeaca00c12 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-64 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P40_16895 e8832e079eb1298c0e39a2eeaca00c12 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-64 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P40_16895 e8832e079eb1298c0e39a2eeaca00c12 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-64 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P40_16895 e8832e079eb1298c0e39a2eeaca00c12 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-64 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P40_16895 e8832e079eb1298c0e39a2eeaca00c12 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 11 339 1.1E-159 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P40_16895 e8832e079eb1298c0e39a2eeaca00c12 347 SUPERFAMILY SSF53067 11 152 1.3E-37 T 13-10-2018 P40_16895 e8832e079eb1298c0e39a2eeaca00c12 347 Gene3D G3DSA:3.30.420.40 158 321 7.1E-130 T 13-10-2018 P40_16895 e8832e079eb1298c0e39a2eeaca00c12 347 Gene3D G3DSA:3.90.640.10 190 263 7.1E-130 T 13-10-2018 P40_16895 e8832e079eb1298c0e39a2eeaca00c12 347 SUPERFAMILY SSF53067 153 341 1.62E-49 T 13-10-2018 P40_16895 e8832e079eb1298c0e39a2eeaca00c12 347 Gene3D G3DSA:3.30.420.40 16 331 7.1E-130 T 13-10-2018 P40_15060 4771508608f9a33fc4707d8f05d1000f 228 PIRSF PIRSF006293 1 228 1.6E-79 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 P40_15060 4771508608f9a33fc4707d8f05d1000f 228 Pfam PF06508 Queuosine biosynthesis protein QueC 3 217 3.3E-78 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 P40_15060 4771508608f9a33fc4707d8f05d1000f 228 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 210 1.2E-61 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 P40_15060 4771508608f9a33fc4707d8f05d1000f 228 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 223 56.641 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 P40_15060 4771508608f9a33fc4707d8f05d1000f 228 Gene3D G3DSA:3.40.50.620 2 226 2.2E-76 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_15060 4771508608f9a33fc4707d8f05d1000f 228 SUPERFAMILY SSF52402 2 225 6.4E-66 T 13-10-2018 P40_01125 eab564aad30c5a084b9faf938afdeb49 238 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 57 237 1.1E-55 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 P40_01125 eab564aad30c5a084b9faf938afdeb49 238 Pfam PF02390 Putative methyltransferase 64 233 6.4E-56 T 13-10-2018 P40_01125 eab564aad30c5a084b9faf938afdeb49 238 SUPERFAMILY SSF53335 16 236 1.69E-35 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_01125 eab564aad30c5a084b9faf938afdeb49 238 Gene3D G3DSA:3.40.50.150 31 238 7.6E-66 T 13-10-2018 P40_01125 eab564aad30c5a084b9faf938afdeb49 238 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 29.103 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 5.0E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 5.0E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 5.0E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 5.0E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.0E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 5.0E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 5.0E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 5.0E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.0E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 SUPERFAMILY SSF82693 40 134 1.67E-24 T 13-10-2018 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 SUPERFAMILY SSF82866 814 1009 1.57E-46 T 13-10-2018 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 SUPERFAMILY SSF82693 661 839 8.37E-14 T 13-10-2018 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 SUPERFAMILY SSF82866 290 489 3.4E-48 T 13-10-2018 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 Gene3D G3DSA:3.30.2090.10 178 268 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 Gene3D G3DSA:1.20.1640.10 10 503 0.0 T 13-10-2018 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 Pfam PF00873 AcrB/AcrD/AcrF family 4 1009 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 SUPERFAMILY SSF82693 556 655 3.4E-18 T 13-10-2018 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 Gene3D G3DSA:1.20.1640.10 504 1006 0.0 T 13-10-2018 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 Gene3D G3DSA:3.30.70.1440 655 849 0.0 T 13-10-2018 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 SUPERFAMILY SSF82714 705 788 2.49E-18 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 Gene3D G3DSA:3.30.70.1430 40 800 0.0 T 13-10-2018 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 Gene3D G3DSA:3.30.70.1320 134 325 0.0 T 13-10-2018 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 Gene3D G3DSA:3.30.2090.10 704 792 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 SUPERFAMILY SSF82714 182 265 4.71E-19 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 SUPERFAMILY SSF82693 135 323 6.28E-21 T 13-10-2018 P40_21655 30c5e1b220dacedebbf0942da45a4f67 1033 Gene3D G3DSA:3.30.70.1430 558 654 0.0 T 13-10-2018 P40_02770 efef0bd7bd829ce1113146531796ed77 898 Gene3D G3DSA:2.20.25.90 2 55 1.4E-14 T 13-10-2018 P40_02770 efef0bd7bd829ce1113146531796ed77 898 SUPERFAMILY SSF50692 580 722 1.63E-42 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily P40_02770 efef0bd7bd829ce1113146531796ed77 898 Gene3D G3DSA:3.40.228.10 141 574 4.6E-174 T 13-10-2018 P40_02770 efef0bd7bd829ce1113146531796ed77 898 PIRSF PIRSF036643 1 716 2.2E-156 T 13-10-2018 P40_02770 efef0bd7bd829ce1113146531796ed77 898 SUPERFAMILY SSF53706 2 576 5.76E-186 T 13-10-2018 P40_02770 efef0bd7bd829ce1113146531796ed77 898 Pfam PF01568 Molydopterin dinucleotide binding domain 590 701 2.0E-28 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 P40_02770 efef0bd7bd829ce1113146531796ed77 898 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 4 22 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 P40_02770 efef0bd7bd829ce1113146531796ed77 898 Gene3D G3DSA:3.40.50.740 74 570 4.6E-174 T 13-10-2018 P40_02770 efef0bd7bd829ce1113146531796ed77 898 Pfam PF00384 Molybdopterin oxidoreductase 59 488 1.1E-78 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_02770 efef0bd7bd829ce1113146531796ed77 898 Gene3D G3DSA:1.10.10.1100 841 894 7.6E-10 T 13-10-2018 P40_02770 efef0bd7bd829ce1113146531796ed77 898 Pfam PF04324 BFD-like [2Fe-2S] binding domain 841 891 1.4E-15 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain P40_02770 efef0bd7bd829ce1113146531796ed77 898 SMART SM00926 1 56 1.1E-16 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_02770 efef0bd7bd829ce1113146531796ed77 898 Gene3D G3DSA:2.40.40.20 581 706 3.6E-39 T 13-10-2018 P40_02770 efef0bd7bd829ce1113146531796ed77 898 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 3 54 1.3E-16 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_21505 0d206b16dadc3117c4bc40991bef3617 158 Gene3D G3DSA:3.40.50.850 1 156 2.3E-13 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_21505 0d206b16dadc3117c4bc40991bef3617 158 SUPERFAMILY SSF52499 1 142 1.44E-18 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_21505 0d206b16dadc3117c4bc40991bef3617 158 Pfam PF00857 Isochorismatase family 65 131 2.8E-7 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 P40_04150 58472b8a0cb7c590ff61b8556334c5df 613 SUPERFAMILY SSF51206 18 143 5.24E-16 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like P40_04150 58472b8a0cb7c590ff61b8556334c5df 613 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 468 609 8.4E-40 T 13-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding P40_04150 58472b8a0cb7c590ff61b8556334c5df 613 Gene3D G3DSA:2.60.120.10 18 146 1.0E-13 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_04150 58472b8a0cb7c590ff61b8556334c5df 613 SMART SM00116 228 275 0.026 T 13-10-2018 IPR000644 CBS domain P40_04150 58472b8a0cb7c590ff61b8556334c5df 613 SMART SM00116 165 211 0.4 T 13-10-2018 IPR000644 CBS domain P40_04150 58472b8a0cb7c590ff61b8556334c5df 613 Pfam PF00571 CBS domain 229 274 9.9E-4 T 13-10-2018 IPR000644 CBS domain P40_04150 58472b8a0cb7c590ff61b8556334c5df 613 Pfam PF00571 CBS domain 161 211 1.7E-5 T 13-10-2018 IPR000644 CBS domain P40_04150 58472b8a0cb7c590ff61b8556334c5df 613 SMART SM00100 18 138 0.0029 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_04150 58472b8a0cb7c590ff61b8556334c5df 613 Pfam PF03445 Putative nucleotidyltransferase DUF294 300 429 1.7E-42 T 13-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 P40_04150 58472b8a0cb7c590ff61b8556334c5df 613 SUPERFAMILY SSF54631 156 274 4.79E-17 T 13-10-2018 P40_04150 58472b8a0cb7c590ff61b8556334c5df 613 Gene3D G3DSA:3.10.580.10 153 280 3.8E-17 T 13-10-2018 P40_04150 58472b8a0cb7c590ff61b8556334c5df 613 Pfam PF00027 Cyclic nucleotide-binding domain 39 122 1.6E-9 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_18150 f97ff4d7ef4b4962c0c3df8b83be6582 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 1.0E-7 T 13-10-2018 P40_18150 f97ff4d7ef4b4962c0c3df8b83be6582 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 2.5E-21 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18150 f97ff4d7ef4b4962c0c3df8b83be6582 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18150 f97ff4d7ef4b4962c0c3df8b83be6582 38 Pfam PF00444 Ribosomal protein L36 1 38 6.1E-21 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18150 f97ff4d7ef4b4962c0c3df8b83be6582 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.984 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18150 f97ff4d7ef4b4962c0c3df8b83be6582 38 SUPERFAMILY SSF57840 1 38 2.35E-17 T 13-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_07175 3dc2c6bcbac4cd225d9767c038be1ff1 448 SUPERFAMILY SSF53335 72 445 2.86E-81 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_07175 3dc2c6bcbac4cd225d9767c038be1ff1 448 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 15 448 68.388 T 13-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 P40_07175 3dc2c6bcbac4cd225d9767c038be1ff1 448 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 21 440 3.9E-95 T 13-10-2018 P40_07175 3dc2c6bcbac4cd225d9767c038be1ff1 448 SUPERFAMILY SSF50249 15 71 3.26E-13 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_07175 3dc2c6bcbac4cd225d9767c038be1ff1 448 Gene3D G3DSA:3.40.50.150 85 442 2.1E-105 T 13-10-2018 P40_07175 3dc2c6bcbac4cd225d9767c038be1ff1 448 Gene3D G3DSA:3.40.1350.30 132 280 2.1E-105 T 13-10-2018 P40_07175 3dc2c6bcbac4cd225d9767c038be1ff1 448 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 379 409 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site P40_07175 3dc2c6bcbac4cd225d9767c038be1ff1 448 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 277 443 3.7E-22 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 P40_07175 3dc2c6bcbac4cd225d9767c038be1ff1 448 Gene3D G3DSA:2.40.50.140 1 84 5.5E-26 T 13-10-2018 P40_07175 3dc2c6bcbac4cd225d9767c038be1ff1 448 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 430 440 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site P40_13830 83dc76d898083cfe855969732b1c286a 359 Pfam PF00266 Aminotransferase class-V 5 347 7.2E-55 T 13-10-2018 IPR000192 Aminotransferase class V domain P40_13830 83dc76d898083cfe855969732b1c286a 359 Gene3D G3DSA:3.40.640.10 17 256 1.4E-93 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_13830 83dc76d898083cfe855969732b1c286a 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 357 9.9E-161 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 P40_13830 83dc76d898083cfe855969732b1c286a 359 SUPERFAMILY SSF53383 1 356 6.03E-119 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_13830 83dc76d898083cfe855969732b1c286a 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 358 52.616 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 P40_13830 83dc76d898083cfe855969732b1c286a 359 PIRSF PIRSF000525 1 359 3.7E-157 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 P40_13830 83dc76d898083cfe855969732b1c286a 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site P40_13830 83dc76d898083cfe855969732b1c286a 359 Gene3D G3DSA:3.90.1150.10 257 359 4.5E-41 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_13925 84cf5abfd476842ace86082c3e3e728a 354 Pfam PF00570 HRDC domain 207 272 4.1E-13 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 P40_13925 84cf5abfd476842ace86082c3e3e728a 354 SUPERFAMILY SSF47819 190 288 5.01E-19 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 P40_13925 84cf5abfd476842ace86082c3e3e728a 354 Gene3D G3DSA:1.10.150.80 191 288 2.3E-20 T 13-10-2018 P40_13925 84cf5abfd476842ace86082c3e3e728a 354 SUPERFAMILY SSF53098 2 199 3.03E-45 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_13925 84cf5abfd476842ace86082c3e3e728a 354 SMART SM00474 3 165 2.3E-20 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 P40_13925 84cf5abfd476842ace86082c3e3e728a 354 Gene3D G3DSA:3.30.420.10 4 187 1.1E-50 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_13925 84cf5abfd476842ace86082c3e3e728a 354 TIGRFAM TIGR01388 rnd: ribonuclease D 22 352 6.9E-90 T 13-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 P40_13925 84cf5abfd476842ace86082c3e3e728a 354 SUPERFAMILY SSF47819 285 354 1.92E-13 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 P40_13925 84cf5abfd476842ace86082c3e3e728a 354 Pfam PF01612 3'-5' exonuclease 20 164 9.4E-25 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 P40_17255 dcf317da93011b7b4478e4056bb2bb80 342 Gene3D G3DSA:2.40.10.240 62 159 2.2E-111 T 13-10-2018 P40_17255 dcf317da93011b7b4478e4056bb2bb80 342 SUPERFAMILY SSF111337 2 336 1.15E-132 T 13-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 P40_17255 dcf317da93011b7b4478e4056bb2bb80 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 337 46.851 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 P40_17255 dcf317da93011b7b4478e4056bb2bb80 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2 336 1.5E-134 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 P40_17255 dcf317da93011b7b4478e4056bb2bb80 342 Pfam PF02547 Queuosine biosynthesis protein 4 336 5.0E-131 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 P40_17255 dcf317da93011b7b4478e4056bb2bb80 342 Gene3D G3DSA:3.40.1780.10 14 336 2.2E-111 T 13-10-2018 P40_09215 26e0a444d6983f734e4f8a83c12d3bcb 256 Gene3D G3DSA:2.160.10.10 1 188 4.7E-57 T 13-10-2018 P40_09215 26e0a444d6983f734e4f8a83c12d3bcb 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 254 3.7E-25 T 13-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 P40_09215 26e0a444d6983f734e4f8a83c12d3bcb 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 43.634 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 P40_09215 26e0a444d6983f734e4f8a83c12d3bcb 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 136 8.3E-6 T 13-10-2018 IPR001451 Hexapeptide repeat P40_09215 26e0a444d6983f734e4f8a83c12d3bcb 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 46 1.2E-8 T 13-10-2018 IPR001451 Hexapeptide repeat P40_09215 26e0a444d6983f734e4f8a83c12d3bcb 256 Gene3D G3DSA:1.20.1180.10 191 256 2.0E-22 T 13-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 P40_09215 26e0a444d6983f734e4f8a83c12d3bcb 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 254 9.4E-100 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 P40_09215 26e0a444d6983f734e4f8a83c12d3bcb 256 SUPERFAMILY SSF51161 1 256 6.62E-81 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily P40_09215 26e0a444d6983f734e4f8a83c12d3bcb 256 PIRSF PIRSF000456 1 256 4.6E-107 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 P40_20180 afac01838f0c8f526b25003659342df3 425 SMART SM00388 210 275 1.1E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_20180 afac01838f0c8f526b25003659342df3 425 SUPERFAMILY SSF47384 193 273 3.34E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_20180 afac01838f0c8f526b25003659342df3 425 Gene3D G3DSA:3.30.565.10 280 424 1.3E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_20180 afac01838f0c8f526b25003659342df3 425 SMART SM00387 322 425 1.4E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_20180 afac01838f0c8f526b25003659342df3 425 SUPERFAMILY SSF55874 279 422 1.24E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_20180 afac01838f0c8f526b25003659342df3 425 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 273 5.4E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_20180 afac01838f0c8f526b25003659342df3 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 6.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_20180 afac01838f0c8f526b25003659342df3 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 6.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_20180 afac01838f0c8f526b25003659342df3 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 6.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_20180 afac01838f0c8f526b25003659342df3 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 6.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_20180 afac01838f0c8f526b25003659342df3 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 422 6.9E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_20180 afac01838f0c8f526b25003659342df3 425 Gene3D G3DSA:1.10.287.130 160 276 4.1E-21 T 13-10-2018 P40_10455 10315711a544009d9a208f9118ef1995 315 SMART SM00342 224 307 5.2E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_10455 10315711a544009d9a208f9118ef1995 315 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 260 303 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 P40_10455 10315711a544009d9a208f9118ef1995 315 Gene3D G3DSA:1.10.10.60 202 313 3.2E-24 T 13-10-2018 P40_10455 10315711a544009d9a208f9118ef1995 315 Pfam PF12833 Helix-turn-helix domain 230 308 4.2E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_10455 10315711a544009d9a208f9118ef1995 315 SUPERFAMILY SSF46689 259 309 5.38E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_10455 10315711a544009d9a208f9118ef1995 315 Pfam PF14525 AraC-binding-like domain 19 193 8.3E-23 T 13-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like P40_21240 b0bb03e5f60afacb0bf45f6963e6f303 429 Pfam PF02040 Arsenical pump membrane protein 3 425 1.7E-158 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 P40_21240 b0bb03e5f60afacb0bf45f6963e6f303 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 426 2.3E-208 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 P40_21240 b0bb03e5f60afacb0bf45f6963e6f303 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 9.0E-111 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 P40_21240 b0bb03e5f60afacb0bf45f6963e6f303 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 9.0E-111 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 P40_21240 b0bb03e5f60afacb0bf45f6963e6f303 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 9.0E-111 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 P40_21240 b0bb03e5f60afacb0bf45f6963e6f303 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 9.0E-111 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 P40_21240 b0bb03e5f60afacb0bf45f6963e6f303 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 9.0E-111 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 P40_21240 b0bb03e5f60afacb0bf45f6963e6f303 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 9.0E-111 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 P40_21240 b0bb03e5f60afacb0bf45f6963e6f303 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 9.0E-111 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 P40_21240 b0bb03e5f60afacb0bf45f6963e6f303 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 9.0E-111 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 P40_09690 eeeaaf1e7d3c63e87fd0dc97547696f5 204 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 45 3.8E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_09690 eeeaaf1e7d3c63e87fd0dc97547696f5 204 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 15 29 3.8E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_09690 eeeaaf1e7d3c63e87fd0dc97547696f5 204 Gene3D G3DSA:1.10.10.10 1 56 1.0E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_09690 eeeaaf1e7d3c63e87fd0dc97547696f5 204 SMART SM00345 2 55 1.2E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_09690 eeeaaf1e7d3c63e87fd0dc97547696f5 204 SUPERFAMILY SSF48008 60 194 3.14E-31 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_09690 eeeaaf1e7d3c63e87fd0dc97547696f5 204 SMART SM00895 65 187 9.8E-27 T 13-10-2018 IPR011711 GntR, C-terminal P40_09690 eeeaaf1e7d3c63e87fd0dc97547696f5 204 SUPERFAMILY SSF46785 1 59 4.72E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_09690 eeeaaf1e7d3c63e87fd0dc97547696f5 204 Gene3D G3DSA:1.20.120.530 59 199 1.2E-33 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_09690 eeeaaf1e7d3c63e87fd0dc97547696f5 204 Pfam PF07729 FCD domain 65 186 2.6E-32 T 13-10-2018 IPR011711 GntR, C-terminal P40_09690 eeeaaf1e7d3c63e87fd0dc97547696f5 204 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 55 1.5E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_04815 6e374e7eb4a980a38de13a837597a402 428 Gene3D G3DSA:3.30.470.20 191 329 1.4E-60 T 13-10-2018 P40_04815 6e374e7eb4a980a38de13a837597a402 428 SUPERFAMILY SSF52440 1 103 1.21E-36 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_04815 6e374e7eb4a980a38de13a837597a402 428 Gene3D G3DSA:3.40.50.20 2 95 3.8E-37 T 13-10-2018 P40_04815 6e374e7eb4a980a38de13a837597a402 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 13-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P40_04815 6e374e7eb4a980a38de13a837597a402 428 Gene3D G3DSA:3.30.1490.20 121 190 1.1E-28 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_04815 6e374e7eb4a980a38de13a837597a402 428 SMART SM01210 330 423 7.1E-53 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P40_04815 6e374e7eb4a980a38de13a837597a402 428 SMART SM01209 103 296 6.4E-143 T 13-10-2018 P40_04815 6e374e7eb4a980a38de13a837597a402 428 SUPERFAMILY SSF51246 329 423 7.85E-32 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 P40_04815 6e374e7eb4a980a38de13a837597a402 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 4.1E-83 T 13-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P40_04815 6e374e7eb4a980a38de13a837597a402 428 Gene3D G3DSA:3.90.600.10 330 428 3.8E-35 T 13-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P40_04815 6e374e7eb4a980a38de13a837597a402 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.0E-35 T 13-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P40_04815 6e374e7eb4a980a38de13a837597a402 428 SUPERFAMILY SSF56059 104 321 7.07E-70 T 13-10-2018 P40_04815 6e374e7eb4a980a38de13a837597a402 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.837 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P40_04815 6e374e7eb4a980a38de13a837597a402 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.4E-182 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P40_04815 6e374e7eb4a980a38de13a837597a402 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 1.8E-29 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P40_20810 734f879516348c01c1331bdc78d3ee3c 450 Gene3D G3DSA:1.10.3550.10 113 435 7.0E-145 T 13-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal P40_20810 734f879516348c01c1331bdc78d3ee3c 450 Gene3D G3DSA:1.10.3210.10 25 238 7.0E-145 T 13-10-2018 P40_20810 734f879516348c01c1331bdc78d3ee3c 450 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 23 441 4.0E-94 T 13-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 P40_20810 734f879516348c01c1331bdc78d3ee3c 450 Gene3D G3DSA:1.10.3410.10 239 350 7.0E-145 T 13-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 P40_20810 734f879516348c01c1331bdc78d3ee3c 450 SUPERFAMILY SSF109604 21 439 1.21E-64 T 13-10-2018 P40_20810 734f879516348c01c1331bdc78d3ee3c 450 Pfam PF01966 HD domain 60 127 2.6E-8 T 13-10-2018 IPR006674 HD domain P40_20810 734f879516348c01c1331bdc78d3ee3c 450 SMART SM00471 56 255 6.3E-9 T 13-10-2018 IPR003607 HD/PDEase domain P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 SMART SM00091 638 705 0.0016 T 13-10-2018 IPR000014 PAS domain P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 SUPERFAMILY SSF52172 1036 1154 6.12E-20 T 13-10-2018 IPR011006 CheY-like superfamily P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 SMART SM00448 1038 1151 3.8E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 427 447 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 SUPERFAMILY SSF55785 630 751 2.28E-12 T 13-10-2018 IPR035965 PAS domain superfamily P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 SUPERFAMILY SSF55874 852 1017 3.27E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 SMART SM00387 905 1016 1.2E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 Gene3D G3DSA:1.10.287.130 758 857 1.3E-11 T 13-10-2018 P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 Gene3D G3DSA:1.20.1730.10 42 475 2.1E-21 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 Pfam PF00072 Response regulator receiver domain 1040 1151 6.9E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 SUPERFAMILY SSF47384 777 862 5.49E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 Gene3D G3DSA:3.30.565.10 858 1014 1.5E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 Gene3D G3DSA:3.30.450.20 625 757 2.4E-16 T 13-10-2018 P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 SMART SM00388 791 861 2.5E-4 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1000 1013 7.0E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 PRINTS PR00344 Bacterial sensor protein C-terminal signature 941 955 7.0E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 PRINTS PR00344 Bacterial sensor protein C-terminal signature 976 994 7.0E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 Gene3D G3DSA:3.40.50.2300 1034 1154 4.4E-18 T 13-10-2018 P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 Pfam PF12860 PAS fold 644 757 3.2E-40 T 13-10-2018 P40_04165 981a6ca709f8601d8fa913b5275280e2 1154 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 906 1013 1.1E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_13960 53a86738dcde81017447b51e3fc3a04d 205 Pfam PF02132 RecR protein 39 83 1.0E-15 T 13-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger P40_13960 53a86738dcde81017447b51e3fc3a04d 205 Pfam PF13662 Toprim domain 86 176 8.8E-20 T 13-10-2018 IPR006171 TOPRIM domain P40_13960 53a86738dcde81017447b51e3fc3a04d 205 Hamap MF_00017 Recombination protein RecR [recR]. 1 203 96.735 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 P40_13960 53a86738dcde81017447b51e3fc3a04d 205 SMART SM00493 85 170 2.7E-8 T 13-10-2018 IPR006171 TOPRIM domain P40_13960 53a86738dcde81017447b51e3fc3a04d 205 TIGRFAM TIGR00615 recR: recombination protein RecR 2 201 7.2E-70 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 P40_13960 53a86738dcde81017447b51e3fc3a04d 205 SUPERFAMILY SSF111304 2 203 6.02E-68 T 13-10-2018 IPR023627 Recombination protein RecR P40_13960 53a86738dcde81017447b51e3fc3a04d 205 Gene3D G3DSA:3.40.1360.10 82 202 6.2E-39 T 13-10-2018 P40_13960 53a86738dcde81017447b51e3fc3a04d 205 Gene3D G3DSA:1.10.8.420 1 52 2.0E-17 T 13-10-2018 P40_20395 e44672c912223fd6ce1408abdf0a5482 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 673 39.798 T 13-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 P40_20395 e44672c912223fd6ce1408abdf0a5482 673 Gene3D G3DSA:3.40.50.300 5 268 1.8E-92 T 13-10-2018 P40_20395 e44672c912223fd6ce1408abdf0a5482 673 Gene3D G3DSA:1.10.486.10 379 549 5.5E-119 T 13-10-2018 P40_20395 e44672c912223fd6ce1408abdf0a5482 673 Pfam PF13361 UvrD-like helicase C-terminal domain 273 423 2.8E-33 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 P40_20395 e44672c912223fd6ce1408abdf0a5482 673 Pfam PF13361 UvrD-like helicase C-terminal domain 480 617 2.4E-29 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 P40_20395 e44672c912223fd6ce1408abdf0a5482 673 Gene3D G3DSA:3.40.50.300 276 637 5.5E-119 T 13-10-2018 P40_20395 e44672c912223fd6ce1408abdf0a5482 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 266 8.2E-72 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 P40_20395 e44672c912223fd6ce1408abdf0a5482 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 3 672 5.7E-294 T 13-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 P40_20395 e44672c912223fd6ce1408abdf0a5482 673 SUPERFAMILY SSF52540 2 644 1.84E-162 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_20395 e44672c912223fd6ce1408abdf0a5482 673 Gene3D G3DSA:1.10.10.160 109 183 1.8E-92 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily P40_10775 a1afe2e72ab98742fc91c1022101f97e 205 SUPERFAMILY SSF56784 2 187 1.33E-42 T 13-10-2018 IPR036412 HAD-like superfamily P40_10775 a1afe2e72ab98742fc91c1022101f97e 205 Gene3D G3DSA:3.90.1470.10 13 128 6.2E-77 T 13-10-2018 P40_10775 a1afe2e72ab98742fc91c1022101f97e 205 Pfam PF12710 haloacid dehalogenase-like hydrolase 58 160 1.2E-9 T 13-10-2018 P40_10775 a1afe2e72ab98742fc91c1022101f97e 205 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 2 202 1.4E-97 T 13-10-2018 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 P40_10775 a1afe2e72ab98742fc91c1022101f97e 205 Gene3D G3DSA:3.40.50.1000 4 191 6.2E-77 T 13-10-2018 IPR023214 HAD superfamily P40_01090 9d71ab5a6dbbadb04f73ea1efd0e0a6d 384 Gene3D G3DSA:1.10.287.470 103 162 1.1E-83 T 13-10-2018 P40_01090 9d71ab5a6dbbadb04f73ea1efd0e0a6d 384 Gene3D G3DSA:2.40.50.100 68 196 1.1E-83 T 13-10-2018 P40_01090 9d71ab5a6dbbadb04f73ea1efd0e0a6d 384 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 367 7.0E-82 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 P40_01090 9d71ab5a6dbbadb04f73ea1efd0e0a6d 384 SUPERFAMILY SSF111369 57 274 3.92E-51 T 13-10-2018 P40_01090 9d71ab5a6dbbadb04f73ea1efd0e0a6d 384 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 269 1.4E-35 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain P40_01090 9d71ab5a6dbbadb04f73ea1efd0e0a6d 384 Gene3D G3DSA:2.40.420.20 280 365 1.1E-83 T 13-10-2018 P40_01090 9d71ab5a6dbbadb04f73ea1efd0e0a6d 384 Gene3D G3DSA:2.40.30.170 57 279 1.1E-83 T 13-10-2018 P40_09850 8874514a95a5641e8688273123ff40b8 539 Gene3D G3DSA:3.30.300.310 440 539 1.5E-25 T 13-10-2018 P40_09850 8874514a95a5641e8688273123ff40b8 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 530 2.5E-11 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_09850 8874514a95a5641e8688273123ff40b8 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_09850 8874514a95a5641e8688273123ff40b8 539 SUPERFAMILY SSF56801 14 538 6.02E-115 T 13-10-2018 P40_09850 8874514a95a5641e8688273123ff40b8 539 Gene3D G3DSA:3.40.50.12780 2 439 4.0E-87 T 13-10-2018 P40_09850 8874514a95a5641e8688273123ff40b8 539 Pfam PF00501 AMP-binding enzyme 29 444 3.9E-70 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_06690 c67067295ecf0cff420f0814747d982d 776 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 682 771 1.0E-16 T 13-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_06690 c67067295ecf0cff420f0814747d982d 776 SUPERFAMILY SSF53955 39 250 1.49E-59 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily P40_06690 c67067295ecf0cff420f0814747d982d 776 SUPERFAMILY SSF56601 208 621 1.83E-79 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like P40_06690 c67067295ecf0cff420f0814747d982d 776 Pfam PF00905 Penicillin binding protein transpeptidase domain 303 524 4.6E-8 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 P40_06690 c67067295ecf0cff420f0814747d982d 776 Gene3D G3DSA:1.10.3810.10 55 249 4.2E-51 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_06690 c67067295ecf0cff420f0814747d982d 776 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 36 772 1.7E-207 T 13-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_06690 c67067295ecf0cff420f0814747d982d 776 Gene3D G3DSA:3.40.710.10 254 621 1.0E-69 T 13-10-2018 P40_06690 c67067295ecf0cff420f0814747d982d 776 Pfam PF00912 Transglycosylase 54 226 1.5E-47 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_13600 9702b34c4bf2368a67dd2340450edd48 232 Gene3D G3DSA:3.30.110.170 36 230 1.4E-41 T 13-10-2018 P40_13600 9702b34c4bf2368a67dd2340450edd48 232 Pfam PF04402 Protein of unknown function (DUF541) 34 229 1.3E-37 T 13-10-2018 IPR007497 Protein of unknown function DUF541 P40_13600 9702b34c4bf2368a67dd2340450edd48 232 Gene3D G3DSA:3.30.70.2970 46 151 1.4E-41 T 13-10-2018 P40_09410 ac1708673cbb2c5ee09182527d318148 372 Pfam PF03054 tRNA methyl transferase 16 368 7.7E-132 T 13-10-2018 P40_09410 ac1708673cbb2c5ee09182527d318148 372 Gene3D G3DSA:2.30.30.280 221 288 7.0E-27 T 13-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 P40_09410 ac1708673cbb2c5ee09182527d318148 372 SUPERFAMILY SSF52402 14 299 1.37E-55 T 13-10-2018 P40_09410 ac1708673cbb2c5ee09182527d318148 372 Gene3D G3DSA:2.40.30.10 290 372 5.6E-29 T 13-10-2018 P40_09410 ac1708673cbb2c5ee09182527d318148 372 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 16 368 2.6E-130 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 P40_09410 ac1708673cbb2c5ee09182527d318148 372 Gene3D G3DSA:3.40.50.620 6 220 1.3E-88 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_09410 ac1708673cbb2c5ee09182527d318148 372 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 15 369 38.187 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 P40_08945 5b95805085e74b4ebf930b26dc5c01f7 89 ProSitePatterns PS00151 Acylphosphatase signature 2. 32 48 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 P40_08945 5b95805085e74b4ebf930b26dc5c01f7 89 Pfam PF00708 Acylphosphatase 5 87 1.6E-24 T 13-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 P40_08945 5b95805085e74b4ebf930b26dc5c01f7 89 Gene3D G3DSA:3.30.70.100 1 89 6.1E-30 T 13-10-2018 P40_08945 5b95805085e74b4ebf930b26dc5c01f7 89 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 P40_08945 5b95805085e74b4ebf930b26dc5c01f7 89 SUPERFAMILY SSF54975 1 87 1.96E-28 T 13-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 P40_08945 5b95805085e74b4ebf930b26dc5c01f7 89 PRINTS PR00112 Acylphosphatase signature 3 18 1.0E-7 T 13-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 P40_08945 5b95805085e74b4ebf930b26dc5c01f7 89 PRINTS PR00112 Acylphosphatase signature 24 49 1.0E-7 T 13-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 P40_11555 f7c6310732252553524d14be0320228d 139 Pfam PF03061 Thioesterase superfamily 47 115 9.8E-15 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_11555 f7c6310732252553524d14be0320228d 139 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 18 132 3.3E-20 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 P40_11555 f7c6310732252553524d14be0320228d 139 Gene3D G3DSA:3.10.129.10 3 134 2.7E-33 T 13-10-2018 P40_11555 f7c6310732252553524d14be0320228d 139 SUPERFAMILY SSF54637 7 132 2.72E-28 T 13-10-2018 IPR029069 HotDog domain superfamily P40_17025 8c53753620f92dd25d86604d3c1840a9 230 SMART SM00448 19 133 7.6E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_17025 8c53753620f92dd25d86604d3c1840a9 230 SUPERFAMILY SSF46894 155 226 1.36E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_17025 8c53753620f92dd25d86604d3c1840a9 230 Gene3D G3DSA:3.40.50.2300 21 157 1.1E-17 T 13-10-2018 P40_17025 8c53753620f92dd25d86604d3c1840a9 230 Pfam PF00072 Response regulator receiver domain 22 133 1.1E-13 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_17025 8c53753620f92dd25d86604d3c1840a9 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 183 1.4E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_17025 8c53753620f92dd25d86604d3c1840a9 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 199 1.4E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_17025 8c53753620f92dd25d86604d3c1840a9 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 199 211 1.4E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_17025 8c53753620f92dd25d86604d3c1840a9 230 Gene3D G3DSA:1.10.10.10 161 229 4.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_17025 8c53753620f92dd25d86604d3c1840a9 230 SUPERFAMILY SSF52172 21 145 5.41E-18 T 13-10-2018 IPR011006 CheY-like superfamily P40_17025 8c53753620f92dd25d86604d3c1840a9 230 SMART SM00421 166 223 5.1E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_17025 8c53753620f92dd25d86604d3c1840a9 230 ProSitePatterns PS00622 LuxR-type HTH domain signature. 183 210 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_17025 8c53753620f92dd25d86604d3c1840a9 230 Pfam PF00196 Bacterial regulatory proteins, luxR family 169 222 2.8E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_19460 20d8744203ebf16685745510eccf6a83 247 SUPERFAMILY SSF52172 1 130 5.27E-37 T 13-10-2018 IPR011006 CheY-like superfamily P40_19460 20d8744203ebf16685745510eccf6a83 247 Gene3D G3DSA:2.40.50.40 137 205 3.2E-9 T 13-10-2018 P40_19460 20d8744203ebf16685745510eccf6a83 247 Pfam PF04397 LytTr DNA-binding domain 148 243 4.0E-24 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 P40_19460 20d8744203ebf16685745510eccf6a83 247 Pfam PF00072 Response regulator receiver domain 3 111 1.3E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_19460 20d8744203ebf16685745510eccf6a83 247 Gene3D G3DSA:3.40.50.2300 1 129 8.4E-37 T 13-10-2018 P40_19460 20d8744203ebf16685745510eccf6a83 247 SMART SM00448 1 111 2.1E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_19460 20d8744203ebf16685745510eccf6a83 247 SMART SM00850 146 244 2.5E-31 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 P40_15855 e780bf8890769d5c609eb8403bc78224 115 Gene3D G3DSA:1.20.120.910 1 115 3.1E-22 T 13-10-2018 P40_15855 e780bf8890769d5c609eb8403bc78224 115 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 85 109 - T 13-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site P40_15855 e780bf8890769d5c609eb8403bc78224 115 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 82 114 1.8E-10 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 P40_15855 e780bf8890769d5c609eb8403bc78224 115 SUPERFAMILY SSF57716 82 114 2.14E-7 T 13-10-2018 P40_18020 b8f4488b170b13dde1c549ee27318368 451 SUPERFAMILY SSF53300 280 405 8.89E-5 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily P40_18020 b8f4488b170b13dde1c549ee27318368 451 Pfam PF05762 VWA domain containing CoxE-like protein 226 426 5.3E-38 T 13-10-2018 IPR008912 Uncharacterised protein family CoxE-like P40_03185 42a8ef776b5a4d934c50545ea8340da6 745 SMART SM00434 8 458 2.4E-225 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P40_03185 42a8ef776b5a4d934c50545ea8340da6 745 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 465 3.1E-135 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P40_03185 42a8ef776b5a4d934c50545ea8340da6 745 SUPERFAMILY SSF56719 28 480 5.75E-155 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 P40_03185 42a8ef776b5a4d934c50545ea8340da6 745 Gene3D G3DSA:3.30.1360.40 235 328 2.0E-179 T 13-10-2018 P40_03185 42a8ef776b5a4d934c50545ea8340da6 745 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 1 740 33.937 T 13-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03185 42a8ef776b5a4d934c50545ea8340da6 745 Gene3D G3DSA:2.120.10.90 497 733 1.4E-13 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal P40_03185 42a8ef776b5a4d934c50545ea8340da6 745 Gene3D G3DSA:3.90.199.10 29 478 2.0E-179 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 P40_03185 42a8ef776b5a4d934c50545ea8340da6 745 SUPERFAMILY SSF101904 497 738 9.02E-50 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal P40_03185 42a8ef776b5a4d934c50545ea8340da6 745 Gene3D G3DSA:1.10.268.10 366 451 2.0E-179 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 P40_03185 42a8ef776b5a4d934c50545ea8340da6 745 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 6 738 0.0 T 13-10-2018 P40_03185 42a8ef776b5a4d934c50545ea8340da6 745 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 692 5.6E-5 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 P40_16875 6b0bf9c6951c42b0f9a116e7089640f2 1233 Pfam PF13116 Protein of unknown function 489 765 3.0E-40 T 13-10-2018 IPR025263 Domain of unknown function DUF3971 P40_16875 6b0bf9c6951c42b0f9a116e7089640f2 1233 Pfam PF13502 AsmA-like C-terminal region 986 1228 3.4E-51 T 13-10-2018 IPR032712 AsmA-like, C-terminal P40_16875 6b0bf9c6951c42b0f9a116e7089640f2 1233 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1232 4.1E-169 T 13-10-2018 IPR011836 Conserved hypothetical protein CHP02099 P40_16215 55dd60743e159faa081fa676f2d17dd8 761 SMART SM00028 638 671 3.9 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_16215 55dd60743e159faa081fa676f2d17dd8 761 SMART SM00028 569 602 0.016 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_16215 55dd60743e159faa081fa676f2d17dd8 761 SMART SM00028 672 705 200.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_16215 55dd60743e159faa081fa676f2d17dd8 761 Gene3D G3DSA:1.25.40.10 542 744 2.6E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_16215 55dd60743e159faa081fa676f2d17dd8 761 SUPERFAMILY SSF48695 37 430 1.47E-55 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily P40_16215 55dd60743e159faa081fa676f2d17dd8 761 SUPERFAMILY SSF48371 394 540 9.02E-5 T 13-10-2018 IPR016024 Armadillo-type fold P40_16215 55dd60743e159faa081fa676f2d17dd8 761 Gene3D G3DSA:1.10.1130.10 131 342 1.2E-16 T 13-10-2018 P40_16215 55dd60743e159faa081fa676f2d17dd8 761 SUPERFAMILY SSF48452 567 705 3.8E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_16215 55dd60743e159faa081fa676f2d17dd8 761 Pfam PF13435 Cytochrome c554 and c-prime 169 209 0.0012 T 13-10-2018 IPR023155 Cytochrome c-552/4 P40_16215 55dd60743e159faa081fa676f2d17dd8 761 Pfam PF13435 Cytochrome c554 and c-prime 41 64 0.0065 T 13-10-2018 IPR023155 Cytochrome c-552/4 P40_03210 e5061e7483c8f89c34a7da3645d9f90d 794 Gene3D G3DSA:3.60.20.10 244 782 1.6E-194 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P40_03210 e5061e7483c8f89c34a7da3645d9f90d 794 Gene3D G3DSA:1.10.439.10 34 212 1.9E-64 T 13-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 P40_03210 e5061e7483c8f89c34a7da3645d9f90d 794 Pfam PF01804 Penicillin amidase 44 783 6.5E-118 T 13-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 P40_03210 e5061e7483c8f89c34a7da3645d9f90d 794 Gene3D G3DSA:2.30.120.10 319 396 1.6E-194 T 13-10-2018 P40_03210 e5061e7483c8f89c34a7da3645d9f90d 794 SUPERFAMILY SSF56235 39 792 1.72E-133 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P40_03210 e5061e7483c8f89c34a7da3645d9f90d 794 Gene3D G3DSA:1.10.1400.10 547 726 1.6E-194 T 13-10-2018 P40_00065 eda911296b4f4b464a33e999838e4d44 832 SMART SM00382 618 801 2.8E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_00065 eda911296b4f4b464a33e999838e4d44 832 SMART SM00382 358 552 2.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_00065 eda911296b4f4b464a33e999838e4d44 832 Pfam PF00005 ABC transporter 351 503 1.6E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_00065 eda911296b4f4b464a33e999838e4d44 832 Pfam PF00005 ABC transporter 609 752 4.5E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_00065 eda911296b4f4b464a33e999838e4d44 832 ProSitePatterns PS00211 ABC transporters family signature. 725 739 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_00065 eda911296b4f4b464a33e999838e4d44 832 Gene3D G3DSA:3.40.50.300 591 825 4.7E-61 T 13-10-2018 P40_00065 eda911296b4f4b464a33e999838e4d44 832 Gene3D G3DSA:3.40.50.300 332 576 9.7E-51 T 13-10-2018 P40_00065 eda911296b4f4b464a33e999838e4d44 832 SUPERFAMILY SSF52540 594 823 1.17E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_00065 eda911296b4f4b464a33e999838e4d44 832 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 553 574 1.4E-7 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal P40_00065 eda911296b4f4b464a33e999838e4d44 832 Pfam PF02653 Branched-chain amino acid transport system / permease component 28 290 8.7E-43 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_00065 eda911296b4f4b464a33e999838e4d44 832 SUPERFAMILY SSF52540 334 574 9.94E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_06905 c707e982d74ec093e33461c58bdb6604 162 PIRSF PIRSF014995 1 162 6.3E-55 T 13-10-2018 IPR014469 Protein of unknown function DUF2271 P40_06905 c707e982d74ec093e33461c58bdb6604 162 Pfam PF10029 Predicted periplasmic protein (DUF2271) 21 154 1.6E-48 T 13-10-2018 IPR014469 Protein of unknown function DUF2271 P40_11540 815c97018d3127755154b61207440a48 866 Gene3D G3DSA:1.25.40.310 1 161 1.4E-70 T 13-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 P40_11540 815c97018d3127755154b61207440a48 866 Gene3D G3DSA:3.30.499.10 681 864 7.0E-69 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 P40_11540 815c97018d3127755154b61207440a48 866 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 13-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 P40_11540 815c97018d3127755154b61207440a48 866 SUPERFAMILY SSF52016 162 370 1.51E-69 T 13-10-2018 P40_11540 815c97018d3127755154b61207440a48 866 Gene3D G3DSA:3.40.1060.10 383 679 2.9E-150 T 13-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 P40_11540 815c97018d3127755154b61207440a48 866 Gene3D G3DSA:3.30.499.10 400 527 2.9E-150 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 P40_11540 815c97018d3127755154b61207440a48 866 Pfam PF00330 Aconitase family (aconitate hydratase) 470 817 4.3E-42 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_11540 815c97018d3127755154b61207440a48 866 Gene3D G3DSA:3.20.19.10 162 359 1.5E-77 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 P40_11540 815c97018d3127755154b61207440a48 866 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 380 1.8E-100 T 13-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 P40_11540 815c97018d3127755154b61207440a48 866 Pfam PF11791 Aconitate B N-terminal domain 4 156 5.2E-67 T 13-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 P40_11540 815c97018d3127755154b61207440a48 866 ProSitePatterns PS00450 Aconitase family signature 1. 700 717 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 P40_11540 815c97018d3127755154b61207440a48 866 PIRSF PIRSF036687 1 858 0.0 T 13-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 P40_11540 815c97018d3127755154b61207440a48 866 ProSitePatterns PS01244 Aconitase family signature 2. 760 773 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 P40_11540 815c97018d3127755154b61207440a48 866 SUPERFAMILY SSF74778 2 160 8.76E-69 T 13-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 P40_11540 815c97018d3127755154b61207440a48 866 SUPERFAMILY SSF53732 377 854 4.05E-149 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 P40_12935 a775663c38259623be7a3213ce9cf221 186 Pfam PF13302 Acetyltransferase (GNAT) domain 12 153 8.5E-34 T 13-10-2018 IPR000182 GNAT domain P40_12935 a775663c38259623be7a3213ce9cf221 186 SUPERFAMILY SSF55729 6 161 1.08E-39 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_12935 a775663c38259623be7a3213ce9cf221 186 Gene3D G3DSA:3.40.630.30 1 163 1.4E-45 T 13-10-2018 P40_11230 d1cb3385eeefc7c1dd56aac063d7668b 534 Pfam PF02913 FAD linked oxidases, C-terminal domain 265 525 5.6E-38 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 P40_11230 d1cb3385eeefc7c1dd56aac063d7668b 534 Gene3D G3DSA:3.30.465.40 60 264 3.1E-135 T 13-10-2018 P40_11230 d1cb3385eeefc7c1dd56aac063d7668b 534 SUPERFAMILY SSF55103 271 529 6.87E-37 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 P40_11230 d1cb3385eeefc7c1dd56aac063d7668b 534 Gene3D G3DSA:3.40.462.40 69 484 3.1E-135 T 13-10-2018 P40_11230 d1cb3385eeefc7c1dd56aac063d7668b 534 Pfam PF01565 FAD binding domain 88 226 2.6E-29 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 P40_11230 d1cb3385eeefc7c1dd56aac063d7668b 534 Gene3D G3DSA:1.10.45.10 488 528 4.6E-5 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 P40_11230 d1cb3385eeefc7c1dd56aac063d7668b 534 SUPERFAMILY SSF56176 55 265 3.11E-43 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 P40_17130 986a370ea4bf8d1325ddf9a832909fa3 258 Pfam PF05988 Bacterial protein of unknown function (DUF899) 1 255 1.4E-91 T 13-10-2018 IPR010296 Protein of unknown function DUF899, thioredoxin-like P40_17130 986a370ea4bf8d1325ddf9a832909fa3 258 Gene3D G3DSA:3.40.30.10 48 221 8.8E-6 T 13-10-2018 P40_17130 986a370ea4bf8d1325ddf9a832909fa3 258 SUPERFAMILY SSF52833 53 149 2.88E-8 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_01145 f789162f11d48eb83b291bad9290ab35 287 SUPERFAMILY SSF88659 194 285 6.73E-16 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_01145 f789162f11d48eb83b291bad9290ab35 287 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 5 287 51.302 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_01145 f789162f11d48eb83b291bad9290ab35 287 Gene3D G3DSA:1.20.140.160 132 286 1.7E-15 T 13-10-2018 P40_01145 f789162f11d48eb83b291bad9290ab35 287 Gene3D G3DSA:1.10.601.10 18 129 1.6E-28 T 13-10-2018 P40_01145 f789162f11d48eb83b291bad9290ab35 287 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 81 94 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_01145 f789162f11d48eb83b291bad9290ab35 287 Pfam PF04542 Sigma-70 region 2 57 126 1.7E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_01145 f789162f11d48eb83b291bad9290ab35 287 Pfam PF04545 Sigma-70, region 4 232 283 2.8E-15 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 P40_01145 f789162f11d48eb83b291bad9290ab35 287 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 255 281 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_01145 f789162f11d48eb83b291bad9290ab35 287 SUPERFAMILY SSF88946 16 126 1.31E-39 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_01145 f789162f11d48eb83b291bad9290ab35 287 Pfam PF00140 Sigma-70 factor, region 1.2 20 44 4.6E-5 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_01145 f789162f11d48eb83b291bad9290ab35 287 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 19 286 3.0E-120 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_01145 f789162f11d48eb83b291bad9290ab35 287 PIRSF PIRSF000770 11 287 8.5E-32 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_01145 f789162f11d48eb83b291bad9290ab35 287 PRINTS PR00046 Major sigma-70 factor signature 255 270 1.3E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_01145 f789162f11d48eb83b291bad9290ab35 287 PRINTS PR00046 Major sigma-70 factor signature 81 94 1.3E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_01145 f789162f11d48eb83b291bad9290ab35 287 PRINTS PR00046 Major sigma-70 factor signature 270 281 1.3E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_01145 f789162f11d48eb83b291bad9290ab35 287 PRINTS PR00046 Major sigma-70 factor signature 236 248 1.3E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P40_01145 f789162f11d48eb83b291bad9290ab35 287 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 284 1.7E-32 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_07740 c3bea8d053fbad022df96c8f195ce0ef 314 Gene3D G3DSA:3.60.15.10 18 256 1.9E-45 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_07740 c3bea8d053fbad022df96c8f195ce0ef 314 TIGRFAM TIGR04558 SoxH_rel_PQQ_1: quinoprotein relay system zinc metallohydrolase 1 22 306 1.2E-115 T 13-10-2018 IPR030811 Quinoprotein relay system zinc metallohydrolase 1 P40_07740 c3bea8d053fbad022df96c8f195ce0ef 314 SMART SM00849 53 234 1.0E-21 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_07740 c3bea8d053fbad022df96c8f195ce0ef 314 SUPERFAMILY SSF56281 9 301 2.24E-58 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_07740 c3bea8d053fbad022df96c8f195ce0ef 314 Pfam PF00753 Metallo-beta-lactamase superfamily 50 234 3.5E-22 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_07675 d359590cf48bf5c286fbfe3f2a67dada 463 SUPERFAMILY SSF55785 13 113 2.09E-11 T 13-10-2018 IPR035965 PAS domain superfamily P40_07675 d359590cf48bf5c286fbfe3f2a67dada 463 Gene3D G3DSA:1.10.8.60 320 385 1.5E-20 T 13-10-2018 P40_07675 d359590cf48bf5c286fbfe3f2a67dada 463 Gene3D G3DSA:1.10.10.60 400 453 9.8E-7 T 13-10-2018 P40_07675 d359590cf48bf5c286fbfe3f2a67dada 463 SUPERFAMILY SSF52540 148 384 8.72E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07675 d359590cf48bf5c286fbfe3f2a67dada 463 Pfam PF00158 Sigma-54 interaction domain 148 315 5.2E-42 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 P40_07675 d359590cf48bf5c286fbfe3f2a67dada 463 Pfam PF13426 PAS domain 17 113 1.5E-9 T 13-10-2018 IPR000014 PAS domain P40_07675 d359590cf48bf5c286fbfe3f2a67dada 463 SUPERFAMILY SSF46689 399 453 1.12E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_07675 d359590cf48bf5c286fbfe3f2a67dada 463 Gene3D G3DSA:3.40.50.300 135 319 3.2E-44 T 13-10-2018 P40_07675 d359590cf48bf5c286fbfe3f2a67dada 463 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 121 4.5E-11 T 13-10-2018 IPR000014 PAS domain P40_07675 d359590cf48bf5c286fbfe3f2a67dada 463 SMART SM00091 6 71 1.3E-5 T 13-10-2018 IPR000014 PAS domain P40_07675 d359590cf48bf5c286fbfe3f2a67dada 463 Gene3D G3DSA:3.30.450.20 8 130 1.9E-14 T 13-10-2018 P40_05505 4ef34a873c8778fd239e232fdae81bb3 414 Gene3D G3DSA:3.40.50.12780 2 318 1.4E-73 T 13-10-2018 P40_05505 4ef34a873c8778fd239e232fdae81bb3 414 Gene3D G3DSA:3.30.300.30 319 413 1.9E-13 T 13-10-2018 P40_05505 4ef34a873c8778fd239e232fdae81bb3 414 SUPERFAMILY SSF56801 115 382 4.32E-32 T 13-10-2018 P40_05505 4ef34a873c8778fd239e232fdae81bb3 414 Pfam PF14535 AMP-binding enzyme C-terminal domain 327 403 1.2E-5 T 13-10-2018 IPR028154 AMP-dependent ligase, C-terminal P40_05505 4ef34a873c8778fd239e232fdae81bb3 414 Pfam PF00501 AMP-binding enzyme 153 277 4.8E-13 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_09420 a8e70c941b5775baea2a31d122f4d01b 207 Gene3D G3DSA:3.30.70.1560 68 167 2.4E-38 T 13-10-2018 P40_09420 a8e70c941b5775baea2a31d122f4d01b 207 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 8 176 2.1E-57 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 P40_09420 a8e70c941b5775baea2a31d122f4d01b 207 SUPERFAMILY SSF55120 3 180 2.08E-40 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_09420 a8e70c941b5775baea2a31d122f4d01b 207 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 39 53 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 P40_09420 a8e70c941b5775baea2a31d122f4d01b 207 Pfam PF00849 RNA pseudouridylate synthase 4 148 3.5E-12 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_09420 a8e70c941b5775baea2a31d122f4d01b 207 Gene3D G3DSA:3.30.70.580 1 67 1.4E-25 T 13-10-2018 P40_13740 555c4885970362326b27f70a16dbe80d 194 Pfam PF04060 Putative Fe-S cluster 44 75 2.6E-14 T 13-10-2018 IPR007202 4Fe-4S domain GO:0051536 P40_13740 555c4885970362326b27f70a16dbe80d 194 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 180 2.3E-82 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 P40_13740 555c4885970362326b27f70a16dbe80d 194 Gene3D G3DSA:1.10.15.40 38 83 2.4E-7 T 13-10-2018 P40_13740 555c4885970362326b27f70a16dbe80d 194 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 168 24.717 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 P40_13740 555c4885970362326b27f70a16dbe80d 194 SUPERFAMILY SSF54862 37 175 1.0E-31 T 13-10-2018 P40_13740 555c4885970362326b27f70a16dbe80d 194 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P40_13740 555c4885970362326b27f70a16dbe80d 194 PIRSF PIRSF005784 3 189 7.0E-85 T 13-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 P40_13740 555c4885970362326b27f70a16dbe80d 194 Gene3D G3DSA:3.30.70.20 84 175 1.3E-21 T 13-10-2018 P40_13740 555c4885970362326b27f70a16dbe80d 194 Pfam PF14697 4Fe-4S dicluster domain 109 163 1.9E-17 T 13-10-2018 P40_21010 177a98de86567d85e30e841c2e3f07e0 153 Pfam PF00376 MerR family regulatory protein 14 50 3.3E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_21010 177a98de86567d85e30e841c2e3f07e0 153 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 13 151 1.2E-69 T 13-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 P40_21010 177a98de86567d85e30e841c2e3f07e0 153 SUPERFAMILY SSF46955 13 136 3.08E-29 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_21010 177a98de86567d85e30e841c2e3f07e0 153 SMART SM00422 13 81 8.1E-28 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_21010 177a98de86567d85e30e841c2e3f07e0 153 Pfam PF09278 MerR, DNA binding 55 120 6.3E-18 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding P40_21010 177a98de86567d85e30e841c2e3f07e0 153 Gene3D G3DSA:1.10.1660.10 5 136 3.9E-35 T 13-10-2018 P40_21010 177a98de86567d85e30e841c2e3f07e0 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 25 1.9E-11 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_21010 177a98de86567d85e30e841c2e3f07e0 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 48 68 1.9E-11 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_21010 177a98de86567d85e30e841c2e3f07e0 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 25 38 1.9E-11 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_21010 177a98de86567d85e30e841c2e3f07e0 153 ProSitePatterns PS00552 MerR-type HTH domain signature. 16 38 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_04315 28e5f8874cbcc26b945a613bb9d622bb 319 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 85 101 - T 13-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 P40_04315 28e5f8874cbcc26b945a613bb9d622bb 319 SUPERFAMILY SSF53474 46 306 2.9E-52 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_04315 28e5f8874cbcc26b945a613bb9d622bb 319 Pfam PF07859 alpha/beta hydrolase fold 85 282 1.1E-53 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 P40_04315 28e5f8874cbcc26b945a613bb9d622bb 319 Gene3D G3DSA:3.40.50.1820 14 317 1.6E-73 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_04315 28e5f8874cbcc26b945a613bb9d622bb 319 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 153 165 - T 13-10-2018 IPR033140 Lipase, GDXG, putative serine active site P40_08275 50d60c76c395a9653092d5ac9e6171ef 381 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 53 340 3.2E-32 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_08275 50d60c76c395a9653092d5ac9e6171ef 381 Gene3D G3DSA:3.40.190.10 168 340 6.2E-96 T 13-10-2018 P40_08275 50d60c76c395a9653092d5ac9e6171ef 381 Gene3D G3DSA:3.40.190.170 49 354 6.2E-96 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_08275 50d60c76c395a9653092d5ac9e6171ef 381 PIRSF PIRSF039026 24 370 2.6E-87 T 13-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like P40_05145 3281c8dbf7051947e08426ac7037dfea 815 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 402 1.6E-77 T 13-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 Gene3D G3DSA:3.40.50.620 34 570 3.4E-266 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_05145 3281c8dbf7051947e08426ac7037dfea 815 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 814 23.752 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 SUPERFAMILY SSF50677 226 414 3.03E-55 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 Gene3D G3DSA:1.10.730.10 596 751 1.3E-48 T 13-10-2018 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 Pfam PF08264 Anticodon-binding domain of tRNA 654 776 1.2E-18 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 Gene3D G3DSA:3.90.740.10 228 414 3.4E-266 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 SUPERFAMILY SSF47323 617 814 8.6E-41 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 SUPERFAMILY SSF52374 5 623 2.5E-147 T 13-10-2018 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 2.2E-53 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 2.2E-53 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 2.2E-53 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 2.2E-53 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 2.2E-53 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 2.2E-53 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 2.2E-53 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 Gene3D G3DSA:3.10.20.590 754 814 9.2E-24 T 13-10-2018 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 416 612 3.8E-25 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 171 1.9E-28 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 814 0.0 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P40_05145 3281c8dbf7051947e08426ac7037dfea 815 Gene3D G3DSA:2.30.210.10 571 584 3.4E-266 T 13-10-2018 P40_02920 7d8ffa1f53385fc3d716c5ac9f49a127 278 SUPERFAMILY SSF53474 25 272 3.62E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_02920 7d8ffa1f53385fc3d716c5ac9f49a127 278 Pfam PF12146 Serine aminopeptidase, S33 64 181 3.1E-15 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 P40_02920 7d8ffa1f53385fc3d716c5ac9f49a127 278 Pfam PF08386 TAP-like protein 206 272 6.8E-6 T 13-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal P40_02920 7d8ffa1f53385fc3d716c5ac9f49a127 278 Gene3D G3DSA:3.40.50.1820 23 273 2.4E-36 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_15420 8aa8601a6c0907edd704877306346a71 256 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 247 4.0E-123 T 13-10-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 P40_15420 8aa8601a6c0907edd704877306346a71 256 SUPERFAMILY SSF56529 39 250 1.96E-74 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 P40_15420 8aa8601a6c0907edd704877306346a71 256 Gene3D G3DSA:3.90.850.10 35 250 1.8E-77 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 P40_15420 8aa8601a6c0907edd704877306346a71 256 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 46 244 7.3E-61 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 P40_21460 ddf4b29ec3aa182153f62c5f1f353e64 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 4.2E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_21460 ddf4b29ec3aa182153f62c5f1f353e64 294 Pfam PF03466 LysR substrate binding domain 92 292 6.5E-34 T 13-10-2018 IPR005119 LysR, substrate-binding P40_21460 ddf4b29ec3aa182153f62c5f1f353e64 294 Gene3D G3DSA:1.10.10.10 8 97 2.3E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_21460 ddf4b29ec3aa182153f62c5f1f353e64 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.1E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_21460 ddf4b29ec3aa182153f62c5f1f353e64 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.1E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_21460 ddf4b29ec3aa182153f62c5f1f353e64 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.1E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_21460 ddf4b29ec3aa182153f62c5f1f353e64 294 SUPERFAMILY SSF53850 95 292 3.26E-35 T 13-10-2018 P40_21460 ddf4b29ec3aa182153f62c5f1f353e64 294 Gene3D G3DSA:3.40.190.10 104 288 7.4E-50 T 13-10-2018 P40_21460 ddf4b29ec3aa182153f62c5f1f353e64 294 Gene3D G3DSA:3.40.190.10 165 261 7.4E-50 T 13-10-2018 P40_21460 ddf4b29ec3aa182153f62c5f1f353e64 294 SUPERFAMILY SSF46785 6 86 1.18E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_00240 2c86d17aee538978ba2c9cacac056d66 349 Pfam PF00561 alpha/beta hydrolase fold 60 304 3.0E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_00240 2c86d17aee538978ba2c9cacac056d66 349 SUPERFAMILY SSF53474 24 302 1.42E-33 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_00240 2c86d17aee538978ba2c9cacac056d66 349 PIRSF PIRSF005211 1 346 2.3E-88 T 13-10-2018 IPR012020 AB hydrolase 4 family P40_03595 939b19fa41aff72a5fe2f32a792b9637 216 Gene3D G3DSA:1.20.950.20 1 170 5.1E-18 T 13-10-2018 P40_03595 939b19fa41aff72a5fe2f32a792b9637 216 Pfam PF01292 Prokaryotic cytochrome b561 6 180 5.7E-22 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 P40_03595 939b19fa41aff72a5fe2f32a792b9637 216 SUPERFAMILY SSF81342 1 186 7.85E-38 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 P40_09550 2109ad76b87d9c27ab08e63be3555627 398 Pfam PF13533 Biotin-lipoyl like 73 103 1.2E-5 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain P40_09550 2109ad76b87d9c27ab08e63be3555627 398 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 190 398 2.2E-63 T 13-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 P40_09550 2109ad76b87d9c27ab08e63be3555627 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 34 57 7.8E-40 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_09550 2109ad76b87d9c27ab08e63be3555627 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 260 281 7.8E-40 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_09550 2109ad76b87d9c27ab08e63be3555627 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 7.8E-40 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_09550 2109ad76b87d9c27ab08e63be3555627 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 378 398 7.8E-40 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_09550 2109ad76b87d9c27ab08e63be3555627 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 317 340 7.8E-40 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_09550 2109ad76b87d9c27ab08e63be3555627 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 293 317 7.8E-40 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_09550 2109ad76b87d9c27ab08e63be3555627 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 363 378 7.8E-40 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_09550 2109ad76b87d9c27ab08e63be3555627 398 ProSitePatterns PS00543 HlyD family secretion proteins signature. 363 385 - T 13-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 P40_09550 2109ad76b87d9c27ab08e63be3555627 398 Gene3D G3DSA:2.40.50.100 64 284 1.6E-23 T 13-10-2018 P40_09550 2109ad76b87d9c27ab08e63be3555627 398 Gene3D G3DSA:1.10.287.470 98 247 1.6E-23 T 13-10-2018 P40_09550 2109ad76b87d9c27ab08e63be3555627 398 Gene3D G3DSA:2.40.30.170 52 376 1.6E-23 T 13-10-2018 P40_09550 2109ad76b87d9c27ab08e63be3555627 398 Pfam PF13437 HlyD family secretion protein 247 350 2.2E-16 T 13-10-2018 P40_06075 5fd341e34c50df68178feaa39183c3a4 235 Gene3D G3DSA:1.10.1060.10 105 234 8.0E-51 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P40_06075 5fd341e34c50df68178feaa39183c3a4 235 SUPERFAMILY SSF46548 106 234 8.72E-36 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P40_06075 5fd341e34c50df68178feaa39183c3a4 235 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P40_06075 5fd341e34c50df68178feaa39183c3a4 235 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 110 2.6E-30 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_06075 5fd341e34c50df68178feaa39183c3a4 235 Pfam PF13183 4Fe-4S dicluster domain 143 216 2.3E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain P40_06075 5fd341e34c50df68178feaa39183c3a4 235 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 6 227 3.2E-78 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_06075 5fd341e34c50df68178feaa39183c3a4 235 Gene3D G3DSA:3.10.20.30 1 104 3.1E-31 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_06075 5fd341e34c50df68178feaa39183c3a4 235 SUPERFAMILY SSF54292 2 104 1.21E-25 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 P40_09385 5cd7165e8ee33e8b7d4f9c63c1a89296 453 Gene3D G3DSA:3.40.50.1100 15 239 4.9E-167 T 13-10-2018 P40_09385 5cd7165e8ee33e8b7d4f9c63c1a89296 453 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 106 120 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 P40_09385 5cd7165e8ee33e8b7d4f9c63c1a89296 453 PIRSF PIRSF001413 10 434 1.2E-120 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 P40_09385 5cd7165e8ee33e8b7d4f9c63c1a89296 453 PIRSF PIRSF500824 2 437 4.5E-197 T 13-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 P40_09385 5cd7165e8ee33e8b7d4f9c63c1a89296 453 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 78 415 3.6E-45 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme P40_09385 5cd7165e8ee33e8b7d4f9c63c1a89296 453 SUPERFAMILY SSF53686 28 427 6.16E-111 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme P40_09385 5cd7165e8ee33e8b7d4f9c63c1a89296 453 TIGRFAM TIGR01415 trpB_rel: pyridoxal-phosphate dependent TrpB-like enzyme 14 430 3.7E-190 T 13-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 P40_09385 5cd7165e8ee33e8b7d4f9c63c1a89296 453 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 22 428 39.113 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 P40_09385 5cd7165e8ee33e8b7d4f9c63c1a89296 453 Gene3D G3DSA:3.40.50.1100 14 421 4.9E-167 T 13-10-2018 P40_20830 9b347e94769ba3661f60019031528d66 275 Pfam PF12679 ABC-2 family transporter protein 5 274 9.2E-40 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 P40_07195 4f5d1034242821e281765b31386c16a9 135 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 5.5E-62 T 13-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 P40_07195 4f5d1034242821e281765b31386c16a9 135 Pfam PF00376 MerR family regulatory protein 2 39 1.7E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_07195 4f5d1034242821e281765b31386c16a9 135 SMART SM00422 1 70 3.3E-26 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_07195 4f5d1034242821e281765b31386c16a9 135 SUPERFAMILY SSF46955 1 119 5.49E-35 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_07195 4f5d1034242821e281765b31386c16a9 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.3E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_07195 4f5d1034242821e281765b31386c16a9 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.3E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_07195 4f5d1034242821e281765b31386c16a9 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.3E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_07195 4f5d1034242821e281765b31386c16a9 135 Pfam PF09278 MerR, DNA binding 47 108 5.3E-19 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding P40_07195 4f5d1034242821e281765b31386c16a9 135 Gene3D G3DSA:1.10.1660.10 1 125 2.8E-33 T 13-10-2018 P40_14885 4f5d1034242821e281765b31386c16a9 135 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 5.5E-62 T 13-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 P40_14885 4f5d1034242821e281765b31386c16a9 135 Pfam PF00376 MerR family regulatory protein 2 39 1.7E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_14885 4f5d1034242821e281765b31386c16a9 135 SMART SM00422 1 70 3.3E-26 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_14885 4f5d1034242821e281765b31386c16a9 135 SUPERFAMILY SSF46955 1 119 5.49E-35 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_14885 4f5d1034242821e281765b31386c16a9 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.3E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_14885 4f5d1034242821e281765b31386c16a9 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.3E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_14885 4f5d1034242821e281765b31386c16a9 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.3E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_14885 4f5d1034242821e281765b31386c16a9 135 Pfam PF09278 MerR, DNA binding 47 108 5.3E-19 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding P40_14885 4f5d1034242821e281765b31386c16a9 135 Gene3D G3DSA:1.10.1660.10 1 125 2.8E-33 T 13-10-2018 P40_15250 d5410e4bb3b714ed0329f3aaa85f8974 302 Gene3D G3DSA:3.30.470.80 182 298 1.9E-43 T 13-10-2018 P40_15250 d5410e4bb3b714ed0329f3aaa85f8974 302 Pfam PF08443 RimK-like ATP-grasp domain 98 285 1.4E-65 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 P40_15250 d5410e4bb3b714ed0329f3aaa85f8974 302 SUPERFAMILY SSF56059 98 288 3.03E-50 T 13-10-2018 P40_15250 d5410e4bb3b714ed0329f3aaa85f8974 302 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.352 T 13-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK P40_15250 d5410e4bb3b714ed0329f3aaa85f8974 302 Gene3D G3DSA:3.40.50.20 1 114 1.2E-37 T 13-10-2018 P40_15250 d5410e4bb3b714ed0329f3aaa85f8974 302 Gene3D G3DSA:3.30.1490.20 115 181 2.2E-25 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_15250 d5410e4bb3b714ed0329f3aaa85f8974 302 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 284 3.3E-83 T 13-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 P40_00685 7869200544d7137355e77c0e08809a0c 178 SUPERFAMILY SSF51161 5 174 2.36E-46 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily P40_00685 7869200544d7137355e77c0e08809a0c 178 Gene3D G3DSA:2.160.10.10 2 177 2.4E-55 T 13-10-2018 P40_00685 7869200544d7137355e77c0e08809a0c 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 128 1.5E-6 T 13-10-2018 IPR001451 Hexapeptide repeat P40_00685 7869200544d7137355e77c0e08809a0c 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 45 5.9E-7 T 13-10-2018 IPR001451 Hexapeptide repeat P40_09210 3da31d1675034c3e7ccc747c5f007cb8 145 Gene3D G3DSA:3.10.129.10 1 145 2.8E-60 T 13-10-2018 P40_09210 3da31d1675034c3e7ccc747c5f007cb8 145 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 141 1.2E-62 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 P40_09210 3da31d1675034c3e7ccc747c5f007cb8 145 Pfam PF07977 FabA-like domain 11 136 4.2E-37 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 P40_09210 3da31d1675034c3e7ccc747c5f007cb8 145 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 144 34.829 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 P40_09210 3da31d1675034c3e7ccc747c5f007cb8 145 SUPERFAMILY SSF54637 1 141 7.84E-50 T 13-10-2018 IPR029069 HotDog domain superfamily P40_10410 2f90a657b051d265213441c6c9e365a3 328 Gene3D G3DSA:3.40.50.720 119 263 2.4E-88 T 13-10-2018 P40_10410 2f90a657b051d265213441c6c9e365a3 328 SMART SM00829 7 318 9.9E-35 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P40_10410 2f90a657b051d265213441c6c9e365a3 328 Pfam PF00107 Zinc-binding dehydrogenase 147 262 8.3E-24 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 P40_10410 2f90a657b051d265213441c6c9e365a3 328 SUPERFAMILY SSF50129 6 136 1.17E-33 T 13-10-2018 IPR011032 GroES-like superfamily P40_10410 2f90a657b051d265213441c6c9e365a3 328 Gene3D G3DSA:3.90.180.10 13 314 2.4E-88 T 13-10-2018 P40_10410 2f90a657b051d265213441c6c9e365a3 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 86 2.3E-8 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P40_10410 2f90a657b051d265213441c6c9e365a3 328 SUPERFAMILY SSF51735 108 270 1.51E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_16620 4f46281d5f899da2e3c4c8a3f145f152 251 SUPERFAMILY SSF52540 5 247 1.52E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_16620 4f46281d5f899da2e3c4c8a3f145f152 251 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 246 2.5E-9 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal P40_16620 4f46281d5f899da2e3c4c8a3f145f152 251 Pfam PF00005 ABC transporter 22 177 7.6E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_16620 4f46281d5f899da2e3c4c8a3f145f152 251 Gene3D G3DSA:3.40.50.300 2 247 2.4E-57 T 13-10-2018 P40_16620 4f46281d5f899da2e3c4c8a3f145f152 251 SMART SM00382 30 223 3.5E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_17965 14a19d49f41867381fdf6485aa75f2e6 90 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 5 76 7.5E-21 T 13-10-2018 IPR011893 Selenoprotein, Rdx-type P40_17965 14a19d49f41867381fdf6485aa75f2e6 90 Pfam PF10262 Rdx family 4 77 8.4E-32 T 13-10-2018 IPR011893 Selenoprotein, Rdx-type P40_17965 14a19d49f41867381fdf6485aa75f2e6 90 Gene3D G3DSA:3.40.30.10 1 90 3.4E-39 T 13-10-2018 P40_17965 14a19d49f41867381fdf6485aa75f2e6 90 SUPERFAMILY SSF52833 4 86 7.83E-27 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_16575 10dee3e3c7ce75bde10955de47325a6b 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.658 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 P40_16575 10dee3e3c7ce75bde10955de47325a6b 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 4.3E-65 T 13-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_16575 10dee3e3c7ce75bde10955de47325a6b 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 13-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 P40_16575 10dee3e3c7ce75bde10955de47325a6b 142 PIRSF PIRSF002181 1 142 1.3E-51 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 P40_16575 10dee3e3c7ce75bde10955de47325a6b 142 SUPERFAMILY SSF52161 1 139 1.2E-60 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 P40_16575 10dee3e3c7ce75bde10955de47325a6b 142 Gene3D G3DSA:3.90.1180.10 1 142 3.4E-64 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 P40_16575 10dee3e3c7ce75bde10955de47325a6b 142 Pfam PF00572 Ribosomal protein L13 15 138 3.4E-58 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 P40_07260 7e143db04add86a71ea157e43599525e 159 SUPERFAMILY SSF47240 1 154 1.06E-56 T 13-10-2018 IPR009078 Ferritin-like superfamily P40_07260 7e143db04add86a71ea157e43599525e 159 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 2.0E-77 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_07260 7e143db04add86a71ea157e43599525e 159 PRINTS PR00601 Bacterioferritin signature 128 149 1.2E-71 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_07260 7e143db04add86a71ea157e43599525e 159 PRINTS PR00601 Bacterioferritin signature 86 106 1.2E-71 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_07260 7e143db04add86a71ea157e43599525e 159 PRINTS PR00601 Bacterioferritin signature 23 43 1.2E-71 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_07260 7e143db04add86a71ea157e43599525e 159 PRINTS PR00601 Bacterioferritin signature 3 22 1.2E-71 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_07260 7e143db04add86a71ea157e43599525e 159 PRINTS PR00601 Bacterioferritin signature 44 64 1.2E-71 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_07260 7e143db04add86a71ea157e43599525e 159 PRINTS PR00601 Bacterioferritin signature 65 85 1.2E-71 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_07260 7e143db04add86a71ea157e43599525e 159 PRINTS PR00601 Bacterioferritin signature 107 127 1.2E-71 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_07260 7e143db04add86a71ea157e43599525e 159 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_07260 7e143db04add86a71ea157e43599525e 159 Gene3D G3DSA:1.20.1260.10 1 157 6.6E-73 T 13-10-2018 IPR012347 Ferritin-like P40_07260 7e143db04add86a71ea157e43599525e 159 Pfam PF00210 Ferritin-like domain 8 143 1.2E-39 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 P40_07260 7e143db04add86a71ea157e43599525e 159 PIRSF PIRSF002560 1 157 6.6E-75 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_08900 d5bb460aa67698d8f4a5c91b5deaeaae 323 SMART SM00382 41 182 9.2E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_08900 d5bb460aa67698d8f4a5c91b5deaeaae 323 Gene3D G3DSA:1.10.8.300 210 318 7.4E-32 T 13-10-2018 P40_08900 d5bb460aa67698d8f4a5c91b5deaeaae 323 SUPERFAMILY SSF52540 9 299 1.05E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_08900 d5bb460aa67698d8f4a5c91b5deaeaae 323 Gene3D G3DSA:3.40.50.300 6 201 1.6E-51 T 13-10-2018 P40_08900 d5bb460aa67698d8f4a5c91b5deaeaae 323 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 44 174 1.4E-62 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 P40_08900 d5bb460aa67698d8f4a5c91b5deaeaae 323 PIRSF PIRSF002849 1 323 9.4E-130 T 13-10-2018 P40_01780 f03e31fbbc95ac1aac946f0d92c931c8 143 SMART SM00065 1 138 2.5E-10 T 13-10-2018 IPR003018 GAF domain GO:0005515 P40_01780 f03e31fbbc95ac1aac946f0d92c931c8 143 Gene3D G3DSA:3.30.450.40 1 133 2.4E-30 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_01780 f03e31fbbc95ac1aac946f0d92c931c8 143 SUPERFAMILY SSF55781 6 123 8.72E-23 T 13-10-2018 P40_01780 f03e31fbbc95ac1aac946f0d92c931c8 143 Pfam PF13185 GAF domain 13 125 7.7E-14 T 13-10-2018 IPR003018 GAF domain GO:0005515 P40_09295 e414e5694303e348581786980cdfc41b 293 Pfam PF01545 Cation efflux family 7 198 4.3E-37 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 P40_09295 e414e5694303e348581786980cdfc41b 293 Pfam PF16916 Dimerisation domain of Zinc Transporter 205 278 1.4E-21 T 13-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain P40_09295 e414e5694303e348581786980cdfc41b 293 Gene3D G3DSA:1.20.1510.10 3 198 2.0E-54 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_09295 e414e5694303e348581786980cdfc41b 293 SUPERFAMILY SSF161111 4 199 1.09E-49 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_09295 e414e5694303e348581786980cdfc41b 293 Gene3D G3DSA:3.30.70.1350 199 280 2.4E-24 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 P40_09295 e414e5694303e348581786980cdfc41b 293 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 6 279 2.9E-59 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 P40_09295 e414e5694303e348581786980cdfc41b 293 SUPERFAMILY SSF160240 203 279 1.01E-19 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 P40_09615 cfe019d87cd16da9823c431f87e07c59 405 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 248 396 4.4E-35 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_09615 cfe019d87cd16da9823c431f87e07c59 405 Gene3D G3DSA:1.20.140.10 249 404 2.0E-39 T 13-10-2018 P40_09615 cfe019d87cd16da9823c431f87e07c59 405 Gene3D G3DSA:1.10.540.10 1 133 2.1E-50 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_09615 cfe019d87cd16da9823c431f87e07c59 405 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 131 3.5E-17 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_09615 cfe019d87cd16da9823c431f87e07c59 405 SUPERFAMILY SSF56645 2 261 1.57E-64 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_09615 cfe019d87cd16da9823c431f87e07c59 405 Gene3D G3DSA:2.40.110.10 134 248 8.0E-45 T 13-10-2018 P40_09615 cfe019d87cd16da9823c431f87e07c59 405 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 225 2.1E-17 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_09615 cfe019d87cd16da9823c431f87e07c59 405 SUPERFAMILY SSF47203 246 403 7.73E-42 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_05705 a2dca8dbd055bbd613dc23a8e7250039 311 SMART SM00530 12 73 1.8E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_05705 a2dca8dbd055bbd613dc23a8e7250039 311 SUPERFAMILY SSF47413 10 74 3.76E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_05705 a2dca8dbd055bbd613dc23a8e7250039 311 Pfam PF13464 Domain of unknown function (DUF4115) 236 310 4.1E-21 T 13-10-2018 IPR025194 Domain of unknown function DUF4115 P40_05705 a2dca8dbd055bbd613dc23a8e7250039 311 Pfam PF13413 Helix-turn-helix domain 13 73 2.1E-24 T 13-10-2018 P40_05705 a2dca8dbd055bbd613dc23a8e7250039 311 Gene3D G3DSA:1.10.260.40 2 98 4.7E-27 T 13-10-2018 P40_20360 9d0f92dd2314cca140b8f1c00fc07700 299 SUPERFAMILY SSF53850 91 294 2.06E-32 T 13-10-2018 P40_20360 9d0f92dd2314cca140b8f1c00fc07700 299 SUPERFAMILY SSF46785 1 111 2.52E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_20360 9d0f92dd2314cca140b8f1c00fc07700 299 Gene3D G3DSA:3.40.190.10 92 285 3.0E-32 T 13-10-2018 P40_20360 9d0f92dd2314cca140b8f1c00fc07700 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.7E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20360 9d0f92dd2314cca140b8f1c00fc07700 299 Gene3D G3DSA:1.10.10.10 1 83 8.1E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_20360 9d0f92dd2314cca140b8f1c00fc07700 299 Pfam PF03466 LysR substrate binding domain 88 296 8.2E-35 T 13-10-2018 IPR005119 LysR, substrate-binding P40_20360 9d0f92dd2314cca140b8f1c00fc07700 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.4E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20360 9d0f92dd2314cca140b8f1c00fc07700 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.4E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20360 9d0f92dd2314cca140b8f1c00fc07700 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.4E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20360 9d0f92dd2314cca140b8f1c00fc07700 299 Gene3D G3DSA:3.40.190.10 166 268 3.0E-32 T 13-10-2018 P40_09800 00df4086c6df1b4a5f5f7c511bd3e6fe 370 SUPERFAMILY SSF47203 230 361 4.51E-32 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_09800 00df4086c6df1b4a5f5f7c511bd3e6fe 370 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 83 1.2E-8 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_09800 00df4086c6df1b4a5f5f7c511bd3e6fe 370 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 361 9.8E-22 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_09800 00df4086c6df1b4a5f5f7c511bd3e6fe 370 SUPERFAMILY SSF56645 1 211 7.07E-28 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_09800 00df4086c6df1b4a5f5f7c511bd3e6fe 370 Gene3D G3DSA:2.40.110.10 134 218 5.8E-6 T 13-10-2018 P40_09800 00df4086c6df1b4a5f5f7c511bd3e6fe 370 Gene3D G3DSA:1.10.540.10 1 115 1.5E-15 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_09800 00df4086c6df1b4a5f5f7c511bd3e6fe 370 Gene3D G3DSA:1.20.140.10 228 364 1.8E-31 T 13-10-2018 P40_19360 265902808da60b01f5bfa7aabea0793b 424 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 2.0E-25 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 P40_19360 265902808da60b01f5bfa7aabea0793b 424 SMART SM00919 163 399 5.1E-141 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 P40_19360 265902808da60b01f5bfa7aabea0793b 424 Gene3D G3DSA:3.40.50.10380 1 160 8.5E-65 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 P40_19360 265902808da60b01f5bfa7aabea0793b 424 Gene3D G3DSA:3.40.50.720 161 417 7.0E-86 T 13-10-2018 P40_19360 265902808da60b01f5bfa7aabea0793b 424 Pfam PF00390 Malic enzyme, N-terminal domain 20 150 1.2E-24 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 P40_19360 265902808da60b01f5bfa7aabea0793b 424 SUPERFAMILY SSF51735 163 412 1.97E-82 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_19360 265902808da60b01f5bfa7aabea0793b 424 SUPERFAMILY SSF53223 10 161 1.15E-49 T 13-10-2018 P40_19360 265902808da60b01f5bfa7aabea0793b 424 SMART SM01274 18 151 9.2E-73 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 P40_19360 265902808da60b01f5bfa7aabea0793b 424 PIRSF PIRSF000106 44 419 5.4E-73 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 P40_21220 ca7062d066ca5ff6090b59bff5dfb471 182 Pfam PF01169 Uncharacterized protein family UPF0016 102 177 2.7E-23 T 13-10-2018 IPR001727 Gdt1 family P40_21220 ca7062d066ca5ff6090b59bff5dfb471 182 Pfam PF01169 Uncharacterized protein family UPF0016 5 80 1.7E-23 T 13-10-2018 IPR001727 Gdt1 family P40_21550 adaebea9e66dbfe51b5d2e92798306c0 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 3.7E-73 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_21550 adaebea9e66dbfe51b5d2e92798306c0 514 PIRSF PIRSF039088 2 514 1.8E-235 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21550 adaebea9e66dbfe51b5d2e92798306c0 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 50.206 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21550 adaebea9e66dbfe51b5d2e92798306c0 514 SUPERFAMILY SSF47917 384 512 3.4E-45 T 13-10-2018 P40_21550 adaebea9e66dbfe51b5d2e92798306c0 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 1.3E-45 T 13-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21550 adaebea9e66dbfe51b5d2e92798306c0 514 Gene3D G3DSA:2.40.30.20 2 94 6.5E-34 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_21550 adaebea9e66dbfe51b5d2e92798306c0 514 Gene3D G3DSA:3.40.50.300 95 383 2.3E-129 T 13-10-2018 P40_21550 adaebea9e66dbfe51b5d2e92798306c0 514 Gene3D G3DSA:1.20.150.20 384 514 1.6E-48 T 13-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21550 adaebea9e66dbfe51b5d2e92798306c0 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 6.6E-16 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_21550 adaebea9e66dbfe51b5d2e92798306c0 514 SUPERFAMILY SSF52540 97 382 2.06E-93 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_21550 adaebea9e66dbfe51b5d2e92798306c0 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 513 2.3E-251 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21550 adaebea9e66dbfe51b5d2e92798306c0 514 SUPERFAMILY SSF50615 11 95 1.1E-29 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_08150 a8f31466ca40a991006c98cba5c91143 422 SUPERFAMILY SSF51735 15 191 4.3E-10 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_08150 a8f31466ca40a991006c98cba5c91143 422 Gene3D G3DSA:3.40.50.720 219 422 2.2E-63 T 13-10-2018 P40_08150 a8f31466ca40a991006c98cba5c91143 422 Gene3D G3DSA:3.40.50.720 1 190 1.3E-24 T 13-10-2018 P40_08150 a8f31466ca40a991006c98cba5c91143 422 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 13 403 8.8E-70 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 P40_08150 a8f31466ca40a991006c98cba5c91143 422 PIRSF PIRSF000124 1 422 5.6E-98 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 P40_08150 a8f31466ca40a991006c98cba5c91143 422 PIRSF PIRSF500134 1 422 1.6E-112 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 P40_08150 a8f31466ca40a991006c98cba5c91143 422 SUPERFAMILY SSF48179 187 284 5.27E-23 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_08150 a8f31466ca40a991006c98cba5c91143 422 SMART SM00984 303 407 4.4E-42 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 P40_08150 a8f31466ca40a991006c98cba5c91143 422 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 303 407 4.0E-26 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 P40_08150 a8f31466ca40a991006c98cba5c91143 422 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 187 279 3.7E-24 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 P40_08150 a8f31466ca40a991006c98cba5c91143 422 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 13 169 1.7E-12 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 P40_08150 a8f31466ca40a991006c98cba5c91143 422 SUPERFAMILY SSF52413 288 418 6.28E-34 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 P40_08150 a8f31466ca40a991006c98cba5c91143 422 Gene3D G3DSA:1.20.5.100 191 217 2.3E-12 T 13-10-2018 P40_17725 ade2516280625e7fba6f51615618ecf0 227 Gene3D G3DSA:1.10.357.10 30 213 2.3E-21 T 13-10-2018 P40_17725 ade2516280625e7fba6f51615618ecf0 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 41 81 8.4E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_17725 ade2516280625e7fba6f51615618ecf0 227 SUPERFAMILY SSF46689 30 105 3.59E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_17725 ade2516280625e7fba6f51615618ecf0 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 58 81 6.1E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_17725 ade2516280625e7fba6f51615618ecf0 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 50 6.1E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_17725 ade2516280625e7fba6f51615618ecf0 227 ProSitePatterns PS01081 TetR-type HTH domain signature. 49 80 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site P40_06210 7961570ca73c7892193219c0bd07e150 354 TIGRFAM TIGR02376 Cu_nitrite_red: nitrite reductase, copper-containing 47 340 1.2E-107 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 P40_06210 7961570ca73c7892193219c0bd07e150 354 SUPERFAMILY SSF49503 46 197 3.34E-42 T 13-10-2018 IPR008972 Cupredoxin P40_06210 7961570ca73c7892193219c0bd07e150 354 Gene3D G3DSA:2.60.40.420 184 351 1.4E-54 T 13-10-2018 IPR008972 Cupredoxin P40_06210 7961570ca73c7892193219c0bd07e150 354 Gene3D G3DSA:2.60.40.420 31 183 1.7E-42 T 13-10-2018 IPR008972 Cupredoxin P40_06210 7961570ca73c7892193219c0bd07e150 354 Pfam PF07732 Multicopper oxidase 71 182 5.8E-10 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 P40_06210 7961570ca73c7892193219c0bd07e150 354 SUPERFAMILY SSF49503 181 342 7.23E-54 T 13-10-2018 IPR008972 Cupredoxin P40_06210 7961570ca73c7892193219c0bd07e150 354 PRINTS PR00695 Copper containing nitrite reductase signature 60 78 2.3E-26 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 P40_06210 7961570ca73c7892193219c0bd07e150 354 PRINTS PR00695 Copper containing nitrite reductase signature 104 121 2.3E-26 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 P40_06210 7961570ca73c7892193219c0bd07e150 354 PRINTS PR00695 Copper containing nitrite reductase signature 121 140 2.3E-26 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 P40_06210 7961570ca73c7892193219c0bd07e150 354 PRINTS PR00695 Copper containing nitrite reductase signature 163 179 2.3E-26 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 P40_06210 7961570ca73c7892193219c0bd07e150 354 PRINTS PR00695 Copper containing nitrite reductase signature 86 102 2.3E-26 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 P40_06210 7961570ca73c7892193219c0bd07e150 354 PRINTS PR00695 Copper containing nitrite reductase signature 146 161 2.3E-26 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 P40_08645 af59bf195e1f0e8b2c593488dff9ad3c 274 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 133 143 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 P40_08645 af59bf195e1f0e8b2c593488dff9ad3c 274 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 199 215 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 P40_08645 af59bf195e1f0e8b2c593488dff9ad3c 274 PIRSF PIRSF005902 3 271 6.4E-66 T 13-10-2018 IPR001130 TatD family GO:0016788 P40_08645 af59bf195e1f0e8b2c593488dff9ad3c 274 SUPERFAMILY SSF51556 9 268 5.03E-77 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_08645 af59bf195e1f0e8b2c593488dff9ad3c 274 Gene3D G3DSA:3.20.20.140 7 272 7.4E-88 T 13-10-2018 P40_08645 af59bf195e1f0e8b2c593488dff9ad3c 274 Pfam PF01026 TatD related DNase 11 267 4.7E-59 T 13-10-2018 IPR001130 TatD family GO:0016788 P40_05900 b3f911b18a100a946da1e03c2cafcd7b 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 4.7E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_05900 b3f911b18a100a946da1e03c2cafcd7b 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 4.7E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_05900 b3f911b18a100a946da1e03c2cafcd7b 207 SUPERFAMILY SSF48498 87 183 2.54E-5 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_05900 b3f911b18a100a946da1e03c2cafcd7b 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 5.3E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_05900 b3f911b18a100a946da1e03c2cafcd7b 207 SUPERFAMILY SSF46689 14 78 3.59E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_05900 b3f911b18a100a946da1e03c2cafcd7b 207 Gene3D G3DSA:1.10.357.10 14 206 7.6E-35 T 13-10-2018 P40_19575 7a4170c1154779145a3dad94dc3f1e1b 302 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 12 298 1.4E-107 T 13-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 P40_19575 7a4170c1154779145a3dad94dc3f1e1b 302 Gene3D G3DSA:1.10.443.10 111 290 2.4E-59 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 P40_19575 7a4170c1154779145a3dad94dc3f1e1b 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 296 58.549 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD P40_19575 7a4170c1154779145a3dad94dc3f1e1b 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 90 1.2E-20 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 P40_19575 7a4170c1154779145a3dad94dc3f1e1b 302 SUPERFAMILY SSF56349 7 289 3.83E-59 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 P40_19575 7a4170c1154779145a3dad94dc3f1e1b 302 Gene3D G3DSA:1.10.150.130 6 98 1.1E-19 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal P40_19575 7a4170c1154779145a3dad94dc3f1e1b 302 Pfam PF00589 Phage integrase family 112 282 1.8E-46 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 P40_20325 50428c3f6a4b1a1a856694dee8a2ac75 303 SUPERFAMILY SSF46785 2 84 2.14E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_20325 50428c3f6a4b1a1a856694dee8a2ac75 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 9.1E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20325 50428c3f6a4b1a1a856694dee8a2ac75 303 Gene3D G3DSA:3.40.190.10 95 291 8.3E-55 T 13-10-2018 P40_20325 50428c3f6a4b1a1a856694dee8a2ac75 303 SUPERFAMILY SSF53850 90 294 1.66E-34 T 13-10-2018 P40_20325 50428c3f6a4b1a1a856694dee8a2ac75 303 Pfam PF03466 LysR substrate binding domain 94 293 3.8E-20 T 13-10-2018 IPR005119 LysR, substrate-binding P40_20325 50428c3f6a4b1a1a856694dee8a2ac75 303 Gene3D G3DSA:3.40.190.10 171 267 8.3E-55 T 13-10-2018 P40_20325 50428c3f6a4b1a1a856694dee8a2ac75 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.4E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20325 50428c3f6a4b1a1a856694dee8a2ac75 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.4E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20325 50428c3f6a4b1a1a856694dee8a2ac75 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.4E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20325 50428c3f6a4b1a1a856694dee8a2ac75 303 Gene3D G3DSA:1.10.10.10 1 87 5.2E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_02110 a78327082c635551a3c2a54ea4de92a0 121 Gene3D G3DSA:2.60.40.420 26 120 3.1E-26 T 13-10-2018 IPR008972 Cupredoxin P40_02110 a78327082c635551a3c2a54ea4de92a0 121 SUPERFAMILY SSF49503 17 120 1.46E-18 T 13-10-2018 IPR008972 Cupredoxin P40_02110 a78327082c635551a3c2a54ea4de92a0 121 Pfam PF13473 Cupredoxin-like domain 14 119 2.0E-28 T 13-10-2018 IPR028096 EfeO-type cupredoxin-like domain P40_12625 e089e56ef1f906e402643884e0029f10 399 Gene3D G3DSA:1.20.140.10 235 399 7.3E-38 T 13-10-2018 P40_12625 e089e56ef1f906e402643884e0029f10 399 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 397 1.0E-25 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_12625 e089e56ef1f906e402643884e0029f10 399 SUPERFAMILY SSF56645 2 244 2.49E-72 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_12625 e089e56ef1f906e402643884e0029f10 399 Gene3D G3DSA:1.10.540.10 2 119 1.5E-26 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_12625 e089e56ef1f906e402643884e0029f10 399 SUPERFAMILY SSF47203 232 398 1.44E-23 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_12625 e089e56ef1f906e402643884e0029f10 399 Gene3D G3DSA:2.40.110.10 125 234 1.4E-35 T 13-10-2018 P40_12625 e089e56ef1f906e402643884e0029f10 399 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 213 4.4E-20 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_12625 e089e56ef1f906e402643884e0029f10 399 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.1E-19 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_16780 b0857269d31bdda54682f094648d45a2 322 Gene3D G3DSA:3.40.50.10490 3 193 2.8E-65 T 13-10-2018 P40_16780 b0857269d31bdda54682f094648d45a2 322 PIRSF PIRSF004692 1 322 3.4E-136 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 P40_16780 b0857269d31bdda54682f094648d45a2 322 Gene3D G3DSA:3.10.580.10 194 319 2.7E-46 T 13-10-2018 P40_16780 b0857269d31bdda54682f094648d45a2 322 SUPERFAMILY SSF53697 7 319 1.69E-68 T 13-10-2018 P40_16780 b0857269d31bdda54682f094648d45a2 322 Pfam PF01380 SIS domain 38 170 4.2E-31 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 P40_16780 b0857269d31bdda54682f094648d45a2 322 Pfam PF00571 CBS domain 208 255 2.6E-9 T 13-10-2018 IPR000644 CBS domain P40_16780 b0857269d31bdda54682f094648d45a2 322 Pfam PF00571 CBS domain 266 319 2.1E-7 T 13-10-2018 IPR000644 CBS domain P40_16780 b0857269d31bdda54682f094648d45a2 322 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 312 6.9E-111 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 P40_16780 b0857269d31bdda54682f094648d45a2 322 SMART SM00116 273 321 0.1 T 13-10-2018 IPR000644 CBS domain P40_16780 b0857269d31bdda54682f094648d45a2 322 SMART SM00116 208 256 3.2E-6 T 13-10-2018 IPR000644 CBS domain P40_04635 ae38ea138e587020e928fcf506595d58 326 SUPERFAMILY SSF51412 1 317 1.2E-69 T 13-10-2018 P40_04635 ae38ea138e587020e928fcf506595d58 326 Pfam PF03060 Nitronate monooxygenase 3 310 2.9E-58 T 13-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 P40_04635 ae38ea138e587020e928fcf506595d58 326 Gene3D G3DSA:3.20.20.70 1 326 5.8E-121 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 693 0.0 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 SUPERFAMILY SSF50249 610 694 1.25E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 Gene3D G3DSA:3.30.230.70 2 235 7.6E-80 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 Gene3D G3DSA:2.40.50.140 624 695 9.1E-30 T 13-10-2018 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 SUPERFAMILY SSF54211 294 490 1.67E-47 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 SUPERFAMILY SSF55666 451 550 1.28E-28 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 SMART SM00316 622 692 5.7E-26 T 13-10-2018 IPR022967 RNA-binding domain, S1 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 695 29.907 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 SUPERFAMILY SSF54211 1 144 2.18E-50 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 Gene3D G3DSA:3.30.230.70 236 551 1.2E-116 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 PIRSF PIRSF005499 1 697 1.4E-289 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 SMART SM00322 554 619 7.5E-13 T 13-10-2018 IPR004087 K Homology domain GO:0003676 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 4.3E-20 T 13-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 SUPERFAMILY SSF46915 239 321 5.75E-17 T 13-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 Pfam PF01138 3' exoribonuclease family, domain 1 17 144 3.6E-22 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 Pfam PF01138 3' exoribonuclease family, domain 1 324 457 1.7E-21 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 SUPERFAMILY SSF54791 554 630 7.17E-17 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 Gene3D G3DSA:3.30.1370.10 552 623 2.4E-20 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 SUPERFAMILY SSF55666 145 235 5.33E-27 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 Pfam PF00013 KH domain 559 616 1.3E-11 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 Pfam PF00575 S1 RNA binding domain 621 692 2.8E-19 T 13-10-2018 IPR003029 S1 domain GO:0003676 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 Pfam PF03725 3' exoribonuclease family, domain 2 147 209 9.6E-11 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P40_18645 11a8504d4093ab0722b4990e5c22a2d8 697 Pfam PF03725 3' exoribonuclease family, domain 2 460 530 4.8E-8 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P40_12445 46577b91a413dfab36d27ea94852046d 941 Pfam PF12838 4Fe-4S dicluster domain 545 614 1.9E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain P40_12445 46577b91a413dfab36d27ea94852046d 941 Pfam PF02913 FAD linked oxidases, C-terminal domain 274 519 2.7E-58 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 P40_12445 46577b91a413dfab36d27ea94852046d 941 SUPERFAMILY SSF55103 275 527 3.27E-55 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 P40_12445 46577b91a413dfab36d27ea94852046d 941 Gene3D G3DSA:3.30.70.2740 398 481 2.8E-6 T 13-10-2018 P40_12445 46577b91a413dfab36d27ea94852046d 941 SUPERFAMILY SSF56176 12 270 1.27E-58 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 P40_12445 46577b91a413dfab36d27ea94852046d 941 Pfam PF02754 Cysteine-rich domain 734 802 0.0089 T 13-10-2018 IPR004017 Cysteine-rich domain P40_12445 46577b91a413dfab36d27ea94852046d 941 SUPERFAMILY SSF46548 499 625 2.27E-20 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P40_12445 46577b91a413dfab36d27ea94852046d 941 Pfam PF01565 FAD binding domain 47 183 8.6E-35 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 P40_12445 46577b91a413dfab36d27ea94852046d 941 Gene3D G3DSA:3.30.465.40 14 204 5.4E-32 T 13-10-2018 P40_12445 46577b91a413dfab36d27ea94852046d 941 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 546 557 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P40_12445 46577b91a413dfab36d27ea94852046d 941 Gene3D G3DSA:1.10.1060.10 528 635 1.9E-7 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P40_07535 4e5bff481abb98dc779077a60b9969d6 130 SUPERFAMILY SSF55331 2 124 2.44E-17 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily P40_07535 4e5bff481abb98dc779077a60b9969d6 130 Gene3D G3DSA:3.30.429.10 2 63 1.0E-10 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily P40_07535 4e5bff481abb98dc779077a60b9969d6 130 Pfam PF01361 Tautomerase enzyme 7 60 3.2E-7 T 13-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.277 T 13-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 SUPERFAMILY SSF50677 204 404 8.48E-54 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 SUPERFAMILY SSF52374 3 648 1.3E-134 T 13-10-2018 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 SUPERFAMILY SSF47323 652 929 1.03E-74 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 236 259 2.0E-34 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 402 417 2.0E-34 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 527 540 2.0E-34 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 2.0E-34 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 2.0E-34 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 842 2.8E-285 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 3.5E-27 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 Gene3D G3DSA:3.90.740.10 195 409 8.9E-237 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 Gene3D G3DSA:1.10.730.20 640 929 7.8E-88 T 13-10-2018 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 Gene3D G3DSA:3.40.50.620 25 629 8.9E-237 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_17915 748e691f887ee9765cecbcaa77f519d7 938 Pfam PF06827 Zinc finger found in FPG and IleRS 900 926 1.6E-7 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 P40_17915 748e691f887ee9765cecbcaa77f519d7 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 640 1.4E-211 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_13775 805427c7957a569efb7f6394f01c1ee2 212 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.2E-85 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 P40_13775 805427c7957a569efb7f6394f01c1ee2 212 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 P40_13775 805427c7957a569efb7f6394f01c1ee2 212 Gene3D G3DSA:1.10.340.30 21 132 4.6E-77 T 13-10-2018 P40_13775 805427c7957a569efb7f6394f01c1ee2 212 PIRSF PIRSF001435 1 210 3.6E-51 T 13-10-2018 P40_13775 805427c7957a569efb7f6394f01c1ee2 212 SMART SM00525 186 206 3.3E-4 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 P40_13775 805427c7957a569efb7f6394f01c1ee2 212 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 P40_13775 805427c7957a569efb7f6394f01c1ee2 212 SUPERFAMILY SSF48150 2 208 8.17E-72 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 P40_13775 805427c7957a569efb7f6394f01c1ee2 212 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 1.2E-18 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 P40_13775 805427c7957a569efb7f6394f01c1ee2 212 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.153 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 P40_13775 805427c7957a569efb7f6394f01c1ee2 212 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 6.3E-7 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 P40_13775 805427c7957a569efb7f6394f01c1ee2 212 Pfam PF00633 Helix-hairpin-helix motif 100 127 8.3E-8 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 P40_13775 805427c7957a569efb7f6394f01c1ee2 212 SMART SM00478 38 185 3.3E-54 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 P40_13775 805427c7957a569efb7f6394f01c1ee2 212 Gene3D G3DSA:1.10.1670.10 11 203 4.6E-77 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 P40_05570 8455532f28aad942d6f75d39849c9248 105 Gene3D G3DSA:3.40.1440.10 1 101 2.8E-31 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 P40_05570 8455532f28aad942d6f75d39849c9248 105 SUPERFAMILY SSF82771 3 75 7.19E-13 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 P40_05570 8455532f28aad942d6f75d39849c9248 105 Pfam PF01541 GIY-YIG catalytic domain 3 73 3.7E-12 T 13-10-2018 IPR000305 GIY-YIG endonuclease P40_08865 2bf67ab1b7b14208de22287f98a968f1 297 Gene3D G3DSA:3.60.110.10 1 296 5.1E-95 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P40_08865 2bf67ab1b7b14208de22287f98a968f1 297 Pfam PF00795 Carbon-nitrogen hydrolase 2 275 4.3E-59 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 P40_08865 2bf67ab1b7b14208de22287f98a968f1 297 SUPERFAMILY SSF56317 1 293 5.49E-85 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P40_09660 6421add1bdd539fcc59046722255e564 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 120 3.8E-32 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_09660 6421add1bdd539fcc59046722255e564 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 342 361 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_09660 6421add1bdd539fcc59046722255e564 385 SUPERFAMILY SSF47203 234 383 3.38E-48 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_09660 6421add1bdd539fcc59046722255e564 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 127 139 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_09660 6421add1bdd539fcc59046722255e564 385 Gene3D G3DSA:1.10.540.10 3 121 2.6E-34 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_09660 6421add1bdd539fcc59046722255e564 385 Gene3D G3DSA:2.40.110.10 124 238 1.2E-40 T 13-10-2018 P40_09660 6421add1bdd539fcc59046722255e564 385 SUPERFAMILY SSF56645 6 247 6.54E-83 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_09660 6421add1bdd539fcc59046722255e564 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 383 1.6E-45 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_09660 6421add1bdd539fcc59046722255e564 385 Gene3D G3DSA:1.20.140.10 239 383 1.3E-45 T 13-10-2018 P40_09660 6421add1bdd539fcc59046722255e564 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 222 9.2E-27 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_10700 afe403a64d0e39c633323b3bd46342cb 683 Gene3D G3DSA:3.30.470.20 109 206 9.0E-6 T 13-10-2018 P40_10700 afe403a64d0e39c633323b3bd46342cb 683 SUPERFAMILY SSF56059 16 211 4.71E-11 T 13-10-2018 P40_10700 afe403a64d0e39c633323b3bd46342cb 683 SUPERFAMILY SSF52009 569 676 3.4E-17 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 P40_10700 afe403a64d0e39c633323b3bd46342cb 683 Gene3D G3DSA:3.50.30.10 572 677 5.0E-15 T 13-10-2018 P40_10700 afe403a64d0e39c633323b3bd46342cb 683 Pfam PF00391 PEP-utilising enzyme, mobile domain 600 671 6.9E-13 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 P40_17470 a5dc2a312d877afc060635251c259342 134 Pfam PF11990 Protein of unknown function (DUF3487) 5 115 4.5E-34 T 13-10-2018 IPR021877 Protein of unknown function DUF3487 P40_17470 a5dc2a312d877afc060635251c259342 134 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 6 115 4.8E-32 T 13-10-2018 IPR021877 Protein of unknown function DUF3487 P40_12730 65cfd58092cb8493245d47054ba949b5 674 Gene3D G3DSA:3.10.620.30 359 505 3.7E-26 T 13-10-2018 P40_12730 65cfd58092cb8493245d47054ba949b5 674 SMART SM00460 416 487 4.6E-23 T 13-10-2018 IPR002931 Transglutaminase-like P40_12730 65cfd58092cb8493245d47054ba949b5 674 Pfam PF11992 Domain of unknown function (DUF3488) 13 340 4.7E-103 T 13-10-2018 IPR021878 Protein of unknown function DUF3488 P40_12730 65cfd58092cb8493245d47054ba949b5 674 SUPERFAMILY SSF54001 290 609 4.14E-65 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily P40_12730 65cfd58092cb8493245d47054ba949b5 674 Pfam PF01841 Transglutaminase-like superfamily 369 485 1.3E-25 T 13-10-2018 IPR002931 Transglutaminase-like P40_07340 b08425091c322f197a42e1376f76bce7 201 SUPERFAMILY SSF52540 8 185 3.33E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07340 b08425091c322f197a42e1376f76bce7 201 Gene3D G3DSA:3.40.50.300 2 197 8.5E-38 T 13-10-2018 P40_07340 b08425091c322f197a42e1376f76bce7 201 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 8 195 3.3E-63 T 13-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 P40_07340 b08425091c322f197a42e1376f76bce7 201 Pfam PF00005 ABC transporter 24 153 9.3E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_07340 b08425091c322f197a42e1376f76bce7 201 SMART SM00382 32 201 2.1E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_07340 b08425091c322f197a42e1376f76bce7 201 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_02815 68ab5a15a0594d0ffdf2b6b339a80c5b 138 SMART SM00450 37 134 3.9E-20 T 13-10-2018 IPR001763 Rhodanese-like domain P40_02815 68ab5a15a0594d0ffdf2b6b339a80c5b 138 Gene3D G3DSA:3.40.250.10 26 138 6.4E-26 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_02815 68ab5a15a0594d0ffdf2b6b339a80c5b 138 Pfam PF00581 Rhodanese-like domain 40 130 6.0E-16 T 13-10-2018 IPR001763 Rhodanese-like domain P40_02815 68ab5a15a0594d0ffdf2b6b339a80c5b 138 SUPERFAMILY SSF52821 13 137 1.17E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_05135 a066a18b4809854bb7a161be86c5f9bf 334 Pfam PF06144 DNA polymerase III, delta subunit 21 191 5.7E-30 T 13-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 P40_05135 a066a18b4809854bb7a161be86c5f9bf 334 Gene3D G3DSA:3.40.50.300 1 140 3.2E-46 T 13-10-2018 P40_05135 a066a18b4809854bb7a161be86c5f9bf 334 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 198 324 2.7E-8 T 13-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 P40_05135 a066a18b4809854bb7a161be86c5f9bf 334 Gene3D G3DSA:1.20.272.10 215 332 1.6E-21 T 13-10-2018 P40_05135 a066a18b4809854bb7a161be86c5f9bf 334 SUPERFAMILY SSF52540 1 211 2.6E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_05135 a066a18b4809854bb7a161be86c5f9bf 334 SUPERFAMILY SSF48019 213 324 1.28E-25 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 P40_05135 a066a18b4809854bb7a161be86c5f9bf 334 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 323 1.4E-76 T 13-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 P40_05135 a066a18b4809854bb7a161be86c5f9bf 334 Gene3D G3DSA:1.10.8.60 144 214 6.9E-24 T 13-10-2018 P40_03755 24f931d6518cbeb00353cd8f9d4087a4 216 Pfam PF02254 TrkA-N domain 5 120 2.1E-26 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 P40_03755 24f931d6518cbeb00353cd8f9d4087a4 216 Gene3D G3DSA:3.30.70.1450 137 214 1.7E-16 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 P40_03755 24f931d6518cbeb00353cd8f9d4087a4 216 SUPERFAMILY SSF116726 131 214 5.36E-13 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 P40_03755 24f931d6518cbeb00353cd8f9d4087a4 216 Gene3D G3DSA:3.40.50.720 1 136 1.2E-34 T 13-10-2018 P40_03755 24f931d6518cbeb00353cd8f9d4087a4 216 Pfam PF02080 TrkA-C domain 149 214 2.6E-11 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 P40_03755 24f931d6518cbeb00353cd8f9d4087a4 216 SUPERFAMILY SSF51735 3 136 7.66E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_08135 bfe59eff26ee1621fbeddf189a58b86d 388 SUPERFAMILY SSF48179 191 287 4.08E-30 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_08135 bfe59eff26ee1621fbeddf189a58b86d 388 SUPERFAMILY SSF51735 1 194 1.58E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_08135 bfe59eff26ee1621fbeddf189a58b86d 388 Gene3D G3DSA:3.40.50.720 1 193 1.2E-57 T 13-10-2018 P40_08135 bfe59eff26ee1621fbeddf189a58b86d 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 1.8E-102 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 P40_08135 bfe59eff26ee1621fbeddf189a58b86d 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 3.0E-32 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 P40_08135 bfe59eff26ee1621fbeddf189a58b86d 388 PIRSF PIRSF000124 1 388 8.7E-135 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 P40_08135 bfe59eff26ee1621fbeddf189a58b86d 388 SUPERFAMILY SSF52413 283 388 1.15E-24 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 P40_08135 bfe59eff26ee1621fbeddf189a58b86d 388 SMART SM00984 300 387 4.3E-12 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 P40_08135 bfe59eff26ee1621fbeddf189a58b86d 388 Gene3D G3DSA:3.40.50.720 222 388 2.6E-64 T 13-10-2018 P40_08135 bfe59eff26ee1621fbeddf189a58b86d 388 PIRSF PIRSF500134 342 388 2.6 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 P40_08135 bfe59eff26ee1621fbeddf189a58b86d 388 PIRSF PIRSF500134 1 359 6.5E-118 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 P40_08135 bfe59eff26ee1621fbeddf189a58b86d 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 374 2.4E-7 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 P40_08135 bfe59eff26ee1621fbeddf189a58b86d 388 Gene3D G3DSA:1.20.5.100 194 221 9.2E-21 T 13-10-2018 P40_08135 bfe59eff26ee1621fbeddf189a58b86d 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 9.7E-27 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 P40_03925 792517c2a88782cb04fa380306ed20ef 155 Pfam PF02566 OsmC-like protein 55 151 8.1E-14 T 13-10-2018 IPR003718 OsmC/Ohr family P40_03925 792517c2a88782cb04fa380306ed20ef 155 SUPERFAMILY SSF82784 1 153 1.44E-48 T 13-10-2018 IPR036102 OsmC/Ohr superfamily P40_03925 792517c2a88782cb04fa380306ed20ef 155 Gene3D G3DSA:3.30.300.20 1 152 2.5E-49 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta P40_11290 931a605be0994861c508394d4ad5d6a3 211 Pfam PF01464 Transglycosylase SLT domain 75 178 8.8E-24 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 P40_11290 931a605be0994861c508394d4ad5d6a3 211 Gene3D G3DSA:1.10.530.10 55 196 1.2E-42 T 13-10-2018 P40_11290 931a605be0994861c508394d4ad5d6a3 211 SUPERFAMILY SSF53955 66 194 5.63E-41 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily P40_13940 8e03f5526492c06c3b42b8cf63d62748 311 SUPERFAMILY SSF53474 30 307 2.34E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_13940 8e03f5526492c06c3b42b8cf63d62748 311 Pfam PF00561 alpha/beta hydrolase fold 35 142 4.5E-14 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_13940 8e03f5526492c06c3b42b8cf63d62748 311 Gene3D G3DSA:3.40.50.1820 27 311 4.5E-82 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_19775 81d01c0e77922fa67e39e5e2177b0d7b 169 Gene3D G3DSA:1.10.1740.10 2 71 1.1E-11 T 13-10-2018 P40_19775 81d01c0e77922fa67e39e5e2177b0d7b 169 Pfam PF08281 Sigma-70, region 4 107 159 1.8E-14 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_19775 81d01c0e77922fa67e39e5e2177b0d7b 169 SUPERFAMILY SSF88659 90 163 4.58E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_19775 81d01c0e77922fa67e39e5e2177b0d7b 169 Gene3D G3DSA:1.10.10.10 80 165 3.0E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_19775 81d01c0e77922fa67e39e5e2177b0d7b 169 SUPERFAMILY SSF88946 6 90 9.42E-15 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_19775 81d01c0e77922fa67e39e5e2177b0d7b 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 163 7.2E-25 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_19775 81d01c0e77922fa67e39e5e2177b0d7b 169 Pfam PF04542 Sigma-70 region 2 9 74 1.1E-13 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_18255 f7514303d1200392cab42f46d8cb1bf7 211 Pfam PF00297 Ribosomal protein L3 51 182 9.1E-18 T 13-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18255 f7514303d1200392cab42f46d8cb1bf7 211 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 203 6.5E-92 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18255 f7514303d1200392cab42f46d8cb1bf7 211 SUPERFAMILY SSF50447 2 209 1.59E-81 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P40_18255 f7514303d1200392cab42f46d8cb1bf7 211 Gene3D G3DSA:2.40.30.10 128 210 1.4E-18 T 13-10-2018 P40_18255 f7514303d1200392cab42f46d8cb1bf7 211 Gene3D G3DSA:2.40.50.620 33 96 2.9E-16 T 13-10-2018 P40_18255 f7514303d1200392cab42f46d8cb1bf7 211 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 207 40.912 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18255 f7514303d1200392cab42f46d8cb1bf7 211 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 13-10-2018 IPR019926 Ribosomal protein L3, conserved site P40_03005 a1877935f45473089210d62746007dc4 343 Gene3D G3DSA:3.40.50.2000 1 162 7.3E-56 T 13-10-2018 P40_03005 a1877935f45473089210d62746007dc4 343 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 312 3.6E-60 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 P40_03005 a1877935f45473089210d62746007dc4 343 Gene3D G3DSA:3.40.50.2000 169 309 4.8E-40 T 13-10-2018 P40_03005 a1877935f45473089210d62746007dc4 343 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 298 2.0E-97 T 13-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 P40_03005 a1877935f45473089210d62746007dc4 343 SUPERFAMILY SSF53756 1 340 4.08E-74 T 13-10-2018 P40_15510 8b493ebe7d299ceaf8216cb84a33ed51 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.8E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_15510 8b493ebe7d299ceaf8216cb84a33ed51 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.8E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_15510 8b493ebe7d299ceaf8216cb84a33ed51 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.8E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_15510 8b493ebe7d299ceaf8216cb84a33ed51 288 SUPERFAMILY SSF46785 5 110 4.69E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_15510 8b493ebe7d299ceaf8216cb84a33ed51 288 Gene3D G3DSA:3.40.190.10 175 253 8.2E-10 T 13-10-2018 P40_15510 8b493ebe7d299ceaf8216cb84a33ed51 288 Pfam PF03466 LysR substrate binding domain 92 286 3.5E-33 T 13-10-2018 IPR005119 LysR, substrate-binding P40_15510 8b493ebe7d299ceaf8216cb84a33ed51 288 SUPERFAMILY SSF53850 92 287 1.85E-32 T 13-10-2018 P40_15510 8b493ebe7d299ceaf8216cb84a33ed51 288 Gene3D G3DSA:1.10.10.10 4 88 1.4E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_15510 8b493ebe7d299ceaf8216cb84a33ed51 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.6E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_15510 8b493ebe7d299ceaf8216cb84a33ed51 288 Gene3D G3DSA:3.40.190.10 90 174 1.4E-16 T 13-10-2018 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 864 0.0 T 13-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 Gene3D G3DSA:1.10.1440.20 567 624 1.1E-8 T 13-10-2018 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 PRINTS PR00415 Aconitase family signature 196 209 1.8E-31 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 PRINTS PR00415 Aconitase family signature 210 225 1.8E-31 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 PRINTS PR00415 Aconitase family signature 286 299 1.8E-31 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 PRINTS PR00415 Aconitase family signature 272 285 1.8E-31 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 PRINTS PR00415 Aconitase family signature 138 151 1.8E-31 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 PRINTS PR00415 Aconitase family signature 162 170 1.8E-31 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 PRINTS PR00415 Aconitase family signature 407 418 1.8E-31 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 PRINTS PR00415 Aconitase family signature 365 379 1.8E-31 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 PRINTS PR00415 Aconitase family signature 469 482 1.8E-31 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 29 864 1.6E-288 T 13-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 Pfam PF00330 Aconitase family (aconitate hydratase) 70 538 2.5E-148 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 Gene3D G3DSA:3.30.499.20 9 363 1.1E-130 T 13-10-2018 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 SUPERFAMILY SSF52016 604 863 1.39E-64 T 13-10-2018 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 SUPERFAMILY SSF53732 22 593 3.92E-187 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 Gene3D G3DSA:3.30.499.10 364 566 1.7E-77 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 Gene3D G3DSA:3.20.19.10 625 864 2.0E-78 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 P40_11335 a4e845b12ede488eb91772daa8ed4f35 868 Pfam PF00694 Aconitase C-terminal domain 662 794 4.5E-28 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 P40_19510 c08f91ba923578a38dd726544f146fa5 173 Pfam PF08281 Sigma-70, region 4 115 168 2.2E-17 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_19510 c08f91ba923578a38dd726544f146fa5 173 Gene3D G3DSA:1.10.10.10 112 170 9.0E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_19510 c08f91ba923578a38dd726544f146fa5 173 Gene3D G3DSA:1.10.1740.10 2 82 3.0E-9 T 13-10-2018 P40_19510 c08f91ba923578a38dd726544f146fa5 173 SUPERFAMILY SSF88659 111 169 3.49E-14 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_19510 c08f91ba923578a38dd726544f146fa5 173 SUPERFAMILY SSF88946 11 104 6.28E-15 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_19510 c08f91ba923578a38dd726544f146fa5 173 Pfam PF04542 Sigma-70 region 2 17 84 7.3E-14 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_19510 c08f91ba923578a38dd726544f146fa5 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 168 1.3E-23 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_04835 7fdb0490045d7aed8ef3fb1f7039df9d 361 Pfam PF11906 Protein of unknown function (DUF3426) 202 345 5.7E-38 T 13-10-2018 IPR021834 Protein of unknown function DUF3426 P40_04835 7fdb0490045d7aed8ef3fb1f7039df9d 361 Pfam PF13717 zinc-ribbon domain 6 39 1.6E-8 T 13-10-2018 IPR011723 Zinc finger/thioredoxin putative P40_04835 7fdb0490045d7aed8ef3fb1f7039df9d 361 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 41 2.0E-12 T 13-10-2018 IPR011723 Zinc finger/thioredoxin putative P40_12960 5cba57f2863232f067cb1662b10990ba 479 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 462 1.8E-34 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 P40_12960 5cba57f2863232f067cb1662b10990ba 479 Gene3D G3DSA:3.50.50.60 162 283 2.0E-120 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_12960 5cba57f2863232f067cb1662b10990ba 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 4.5E-40 T 13-10-2018 P40_12960 5cba57f2863232f067cb1662b10990ba 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 4.5E-40 T 13-10-2018 P40_12960 5cba57f2863232f067cb1662b10990ba 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 4.5E-40 T 13-10-2018 P40_12960 5cba57f2863232f067cb1662b10990ba 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 4.5E-40 T 13-10-2018 P40_12960 5cba57f2863232f067cb1662b10990ba 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.5E-40 T 13-10-2018 P40_12960 5cba57f2863232f067cb1662b10990ba 479 Gene3D G3DSA:3.30.390.30 352 478 7.8E-43 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P40_12960 5cba57f2863232f067cb1662b10990ba 479 Gene3D G3DSA:3.50.50.60 5 341 2.0E-120 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_12960 5cba57f2863232f067cb1662b10990ba 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 1.7E-78 T 13-10-2018 P40_12960 5cba57f2863232f067cb1662b10990ba 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 1.7E-78 T 13-10-2018 P40_12960 5cba57f2863232f067cb1662b10990ba 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 1.7E-78 T 13-10-2018 P40_12960 5cba57f2863232f067cb1662b10990ba 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 1.7E-78 T 13-10-2018 P40_12960 5cba57f2863232f067cb1662b10990ba 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 1.7E-78 T 13-10-2018 P40_12960 5cba57f2863232f067cb1662b10990ba 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 1.7E-78 T 13-10-2018 P40_12960 5cba57f2863232f067cb1662b10990ba 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 1.7E-78 T 13-10-2018 P40_12960 5cba57f2863232f067cb1662b10990ba 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 1.7E-78 T 13-10-2018 P40_12960 5cba57f2863232f067cb1662b10990ba 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.7E-78 T 13-10-2018 P40_12960 5cba57f2863232f067cb1662b10990ba 479 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 1.1E-75 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_12960 5cba57f2863232f067cb1662b10990ba 479 SUPERFAMILY SSF55424 349 472 7.56E-40 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P40_12960 5cba57f2863232f067cb1662b10990ba 479 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 P40_12960 5cba57f2863232f067cb1662b10990ba 479 PIRSF PIRSF000350 1 471 3.2E-87 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 P40_12960 5cba57f2863232f067cb1662b10990ba 479 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 472 1.3E-161 T 13-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 P40_12960 5cba57f2863232f067cb1662b10990ba 479 SUPERFAMILY SSF51905 1 344 2.36E-66 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_19710 3544b87e252471a368616417bc4fd96b 334 Gene3D G3DSA:3.40.190.170 29 331 7.5E-103 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_19710 3544b87e252471a368616417bc4fd96b 334 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 43 292 1.7E-76 T 13-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 P40_19710 3544b87e252471a368616417bc4fd96b 334 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 316 5.3E-87 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_19710 3544b87e252471a368616417bc4fd96b 334 PIRSF PIRSF006470 2 334 4.3E-100 T 13-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 P40_02600 826cced845d33d718f1ff6e210c6f0bb 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 317 6.1E-35 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_02600 826cced845d33d718f1ff6e210c6f0bb 319 SUPERFAMILY SSF161098 97 303 1.7E-18 T 13-10-2018 IPR035906 MetI-like superfamily P40_02600 826cced845d33d718f1ff6e210c6f0bb 319 Gene3D G3DSA:1.10.3720.10 90 312 3.5E-24 T 13-10-2018 IPR035906 MetI-like superfamily P40_01500 4603957dad0db2e57b9eef2ce8d5b26b 138 SUPERFAMILY SSF54637 2 134 5.93E-30 T 13-10-2018 IPR029069 HotDog domain superfamily P40_01500 4603957dad0db2e57b9eef2ce8d5b26b 138 Pfam PF03061 Thioesterase superfamily 17 98 3.6E-10 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_01500 4603957dad0db2e57b9eef2ce8d5b26b 138 Gene3D G3DSA:3.10.129.10 1 135 1.6E-29 T 13-10-2018 P40_16275 16d9f009456c203d722a6055c317f4f6 289 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 142 5.3E-12 T 13-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain P40_16275 16d9f009456c203d722a6055c317f4f6 289 Gene3D G3DSA:3.40.50.720 4 158 2.5E-13 T 13-10-2018 P40_16275 16d9f009456c203d722a6055c317f4f6 289 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 166 285 9.7E-31 T 13-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain P40_16275 16d9f009456c203d722a6055c317f4f6 289 SUPERFAMILY SSF51735 4 145 2.21E-9 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_16275 16d9f009456c203d722a6055c317f4f6 289 Gene3D G3DSA:1.10.1040.10 166 289 4.3E-36 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 P40_16275 16d9f009456c203d722a6055c317f4f6 289 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 4 286 1.3E-49 T 13-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 P40_16275 16d9f009456c203d722a6055c317f4f6 289 SUPERFAMILY SSF48179 166 285 1.29E-27 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_06575 2efa145e47b9a738d9308be9e653af31 176 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 176 21.806 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 P40_06575 2efa145e47b9a738d9308be9e653af31 176 Pfam PF01782 RimM N-terminal domain 10 91 2.7E-25 T 13-10-2018 IPR002676 RimM, N-terminal GO:0006364 P40_06575 2efa145e47b9a738d9308be9e653af31 176 Gene3D G3DSA:2.30.30.240 101 176 1.0E-26 T 13-10-2018 P40_06575 2efa145e47b9a738d9308be9e653af31 176 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 175 1.2E-47 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 P40_06575 2efa145e47b9a738d9308be9e653af31 176 SUPERFAMILY SSF50346 101 176 2.35E-18 T 13-10-2018 IPR011033 PRC-barrel-like superfamily P40_06575 2efa145e47b9a738d9308be9e653af31 176 Pfam PF05239 PRC-barrel domain 99 170 5.8E-9 T 13-10-2018 IPR027275 PRC-barrel domain P40_06575 2efa145e47b9a738d9308be9e653af31 176 SUPERFAMILY SSF50447 6 94 5.83E-23 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P40_06575 2efa145e47b9a738d9308be9e653af31 176 Gene3D G3DSA:2.40.30.60 2 95 1.3E-32 T 13-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 P40_04855 0fa177abfbf9cbb52b6b6c7978f86718 448 SUPERFAMILY SSF52440 1 113 6.47E-49 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_04855 0fa177abfbf9cbb52b6b6c7978f86718 448 Gene3D G3DSA:3.30.1490.20 131 203 7.2E-150 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_04855 0fa177abfbf9cbb52b6b6c7978f86718 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 2.9E-36 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_04855 0fa177abfbf9cbb52b6b6c7978f86718 448 SUPERFAMILY SSF51246 332 444 3.92E-40 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 P40_04855 0fa177abfbf9cbb52b6b6c7978f86718 448 Gene3D G3DSA:3.30.470.20 87 433 7.2E-150 T 13-10-2018 P40_04855 0fa177abfbf9cbb52b6b6c7978f86718 448 SMART SM00878 336 442 1.0E-59 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_04855 0fa177abfbf9cbb52b6b6c7978f86718 448 Gene3D G3DSA:3.40.50.20 1 85 4.9E-37 T 13-10-2018 P40_04855 0fa177abfbf9cbb52b6b6c7978f86718 448 SUPERFAMILY SSF56059 83 346 8.84E-67 T 13-10-2018 P40_04855 0fa177abfbf9cbb52b6b6c7978f86718 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 1.4E-223 T 13-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 P40_04855 0fa177abfbf9cbb52b6b6c7978f86718 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 3.3E-79 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_04855 0fa177abfbf9cbb52b6b6c7978f86718 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_04855 0fa177abfbf9cbb52b6b6c7978f86718 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.1E-45 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_04855 0fa177abfbf9cbb52b6b6c7978f86718 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_04945 dd65f35fc098652bf00b44f24c705346 433 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 328 348 - T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 P40_04945 dd65f35fc098652bf00b44f24c705346 433 Pfam PF00860 Permease family 12 381 6.3E-95 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 P40_04945 dd65f35fc098652bf00b44f24c705346 433 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 10 404 3.1E-112 T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 P40_14940 17ef67f4bd7fd130565ac05ea47eadbb 118 SUPERFAMILY SSF46955 17 116 2.01E-20 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_14940 17ef67f4bd7fd130565ac05ea47eadbb 118 Pfam PF13411 MerR HTH family regulatory protein 19 87 4.2E-23 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_14940 17ef67f4bd7fd130565ac05ea47eadbb 118 SMART SM00422 19 89 3.6E-11 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_14940 17ef67f4bd7fd130565ac05ea47eadbb 118 Gene3D G3DSA:1.10.1660.10 12 118 6.5E-23 T 13-10-2018 P40_02875 e1781dd96e2ec5ca8724a3b364a890fc 468 ProSitePatterns PS00180 Glutamine synthetase signature 1. 49 67 - T 13-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 P40_02875 e1781dd96e2ec5ca8724a3b364a890fc 468 Pfam PF00120 Glutamine synthetase, catalytic domain 101 465 1.1E-136 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 P40_02875 e1781dd96e2ec5ca8724a3b364a890fc 468 SMART SM01230 101 378 1.3E-143 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 P40_02875 e1781dd96e2ec5ca8724a3b364a890fc 468 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 385 397 - T 13-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 P40_02875 e1781dd96e2ec5ca8724a3b364a890fc 468 SUPERFAMILY SSF54368 2 99 1.96E-34 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 P40_02875 e1781dd96e2ec5ca8724a3b364a890fc 468 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 467 3.6E-202 T 13-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 P40_02875 e1781dd96e2ec5ca8724a3b364a890fc 468 Gene3D G3DSA:3.30.590.10 104 456 1.4E-146 T 13-10-2018 P40_02875 e1781dd96e2ec5ca8724a3b364a890fc 468 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 258 273 - T 13-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 P40_02875 e1781dd96e2ec5ca8724a3b364a890fc 468 Gene3D G3DSA:3.10.20.70 2 103 1.4E-37 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 P40_02875 e1781dd96e2ec5ca8724a3b364a890fc 468 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 13 94 5.1E-29 T 13-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 P40_02875 e1781dd96e2ec5ca8724a3b364a890fc 468 SUPERFAMILY SSF55931 101 467 1.08E-135 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 P40_19505 e94d55c92515b593cf34420d7bc38181 339 Gene3D G3DSA:2.60.120.1440 115 258 3.5E-16 T 13-10-2018 P40_19505 e94d55c92515b593cf34420d7bc38181 339 PIRSF PIRSF018266 16 339 8.4E-90 T 13-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component P40_19505 e94d55c92515b593cf34420d7bc38181 339 Pfam PF16220 Domain of unknown function (DUF4880) 27 68 7.3E-11 T 13-10-2018 IPR032623 FecR, N-terminal P40_19505 e94d55c92515b593cf34420d7bc38181 339 Pfam PF04773 FecR protein 124 222 1.9E-16 T 13-10-2018 IPR006860 FecR protein P40_03055 b14bc9bbf12bf8218e7b8d21ba66795a 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 313 3.3E-122 T 13-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 P40_03055 b14bc9bbf12bf8218e7b8d21ba66795a 477 Gene3D G3DSA:3.40.1190.20 6 310 1.7E-112 T 13-10-2018 IPR029056 Ribokinase-like P40_03055 b14bc9bbf12bf8218e7b8d21ba66795a 477 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 52 75 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 P40_03055 b14bc9bbf12bf8218e7b8d21ba66795a 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 5 475 43.507 T 13-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 P40_03055 b14bc9bbf12bf8218e7b8d21ba66795a 477 SUPERFAMILY SSF52374 341 472 8.13E-26 T 13-10-2018 P40_03055 b14bc9bbf12bf8218e7b8d21ba66795a 477 SUPERFAMILY SSF53613 13 313 6.08E-59 T 13-10-2018 IPR029056 Ribokinase-like P40_03055 b14bc9bbf12bf8218e7b8d21ba66795a 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 333 474 9.0E-65 T 13-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 P40_03055 b14bc9bbf12bf8218e7b8d21ba66795a 477 Pfam PF01467 Cytidylyltransferase-like 346 440 4.1E-17 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 P40_03055 b14bc9bbf12bf8218e7b8d21ba66795a 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 343 409 1.4E-15 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 P40_03055 b14bc9bbf12bf8218e7b8d21ba66795a 477 Gene3D G3DSA:3.40.50.620 322 477 5.6E-41 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_03055 b14bc9bbf12bf8218e7b8d21ba66795a 477 Pfam PF00294 pfkB family carbohydrate kinase 13 303 7.3E-44 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB P40_06760 b16fca6578d909e9d4d79f566a55f935 359 Gene3D G3DSA:2.40.30.10 34 134 1.2E-23 T 13-10-2018 P40_06760 b16fca6578d909e9d4d79f566a55f935 359 Gene3D G3DSA:3.40.50.80 141 271 2.4E-21 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_06760 b16fca6578d909e9d4d79f566a55f935 359 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 283 348 9.4E-8 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 P40_06760 b16fca6578d909e9d4d79f566a55f935 359 SUPERFAMILY SSF52343 127 258 3.27E-24 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_06760 b16fca6578d909e9d4d79f566a55f935 359 Pfam PF00175 Oxidoreductase NAD-binding domain 148 251 3.3E-10 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 P40_06760 b16fca6578d909e9d4d79f566a55f935 359 SUPERFAMILY SSF54292 262 358 2.1E-17 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 P40_06760 b16fca6578d909e9d4d79f566a55f935 359 Gene3D G3DSA:3.10.20.30 272 359 4.4E-12 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_06760 b16fca6578d909e9d4d79f566a55f935 359 Pfam PF00970 Oxidoreductase FAD-binding domain 66 136 7.6E-10 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 P40_06760 b16fca6578d909e9d4d79f566a55f935 359 PRINTS PR00406 Cytochrome B5 reductase signature 184 195 1.0E-7 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 P40_06760 b16fca6578d909e9d4d79f566a55f935 359 PRINTS PR00406 Cytochrome B5 reductase signature 124 138 1.0E-7 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 P40_06760 b16fca6578d909e9d4d79f566a55f935 359 PRINTS PR00406 Cytochrome B5 reductase signature 67 78 1.0E-7 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 P40_06760 b16fca6578d909e9d4d79f566a55f935 359 PRINTS PR00406 Cytochrome B5 reductase signature 147 166 1.0E-7 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 P40_06760 b16fca6578d909e9d4d79f566a55f935 359 PRINTS PR00406 Cytochrome B5 reductase signature 237 245 1.0E-7 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 P40_06760 b16fca6578d909e9d4d79f566a55f935 359 SUPERFAMILY SSF63380 40 138 2.38E-24 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel P40_03840 34d09dd8d6b6b2d637e7bab52e0c8c9c 372 PIRSF PIRSF006769 3 372 1.2E-123 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 P40_03840 34d09dd8d6b6b2d637e7bab52e0c8c9c 372 Gene3D G3DSA:3.40.140.10 4 139 1.6E-41 T 13-10-2018 P40_03840 34d09dd8d6b6b2d637e7bab52e0c8c9c 372 SUPERFAMILY SSF53597 149 367 1.23E-57 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 P40_03840 34d09dd8d6b6b2d637e7bab52e0c8c9c 372 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 103 4.7E-18 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain P40_03840 34d09dd8d6b6b2d637e7bab52e0c8c9c 372 Pfam PF01872 RibD C-terminal domain 151 364 3.7E-51 T 13-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 P40_03840 34d09dd8d6b6b2d637e7bab52e0c8c9c 372 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 150 368 1.3E-58 T 13-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 P40_03840 34d09dd8d6b6b2d637e7bab52e0c8c9c 372 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 P40_03840 34d09dd8d6b6b2d637e7bab52e0c8c9c 372 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 366 1.8E-114 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 P40_03840 34d09dd8d6b6b2d637e7bab52e0c8c9c 372 SUPERFAMILY SSF53927 7 148 2.84E-44 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 P40_03840 34d09dd8d6b6b2d637e7bab52e0c8c9c 372 Gene3D G3DSA:3.40.430.10 140 372 9.2E-68 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 P40_07980 e0214c840e432d8804699a3ca2fcec66 383 Gene3D G3DSA:1.20.140.10 230 375 4.6E-137 T 13-10-2018 P40_07980 e0214c840e432d8804699a3ca2fcec66 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_07980 e0214c840e432d8804699a3ca2fcec66 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 117 5.1E-32 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_07980 e0214c840e432d8804699a3ca2fcec66 383 PIRSF PIRSF016578 125 378 1.0E-10 T 13-10-2018 P40_07980 e0214c840e432d8804699a3ca2fcec66 383 PIRSF PIRSF016578 4 83 5.1E-6 T 13-10-2018 P40_07980 e0214c840e432d8804699a3ca2fcec66 383 SUPERFAMILY SSF56645 8 243 1.57E-83 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_07980 e0214c840e432d8804699a3ca2fcec66 383 Gene3D G3DSA:1.10.540.10 5 119 4.6E-137 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_07980 e0214c840e432d8804699a3ca2fcec66 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 1.9E-49 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_07980 e0214c840e432d8804699a3ca2fcec66 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_07980 e0214c840e432d8804699a3ca2fcec66 383 SUPERFAMILY SSF47203 228 380 9.18E-57 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_07980 e0214c840e432d8804699a3ca2fcec66 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 1.0E-28 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_07980 e0214c840e432d8804699a3ca2fcec66 383 Gene3D G3DSA:2.40.110.10 120 229 4.6E-137 T 13-10-2018 P40_11225 ad03e7078c8c39a1997a64b23fced89c 503 Pfam PF01266 FAD dependent oxidoreductase 18 350 3.5E-48 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 P40_11225 ad03e7078c8c39a1997a64b23fced89c 503 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 46 58 8.5E-19 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 P40_11225 ad03e7078c8c39a1997a64b23fced89c 503 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 361 373 8.5E-19 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 P40_11225 ad03e7078c8c39a1997a64b23fced89c 503 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 331 337 8.5E-19 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 P40_11225 ad03e7078c8c39a1997a64b23fced89c 503 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 30 40 8.5E-19 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 P40_11225 ad03e7078c8c39a1997a64b23fced89c 503 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 29 8.5E-19 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 P40_11225 ad03e7078c8c39a1997a64b23fced89c 503 Gene3D G3DSA:3.50.50.60 15 373 4.4E-109 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_11225 ad03e7078c8c39a1997a64b23fced89c 503 SUPERFAMILY SSF54373 241 337 2.22E-7 T 13-10-2018 P40_11225 ad03e7078c8c39a1997a64b23fced89c 503 Gene3D G3DSA:3.30.9.10 99 338 4.4E-109 T 13-10-2018 P40_11225 ad03e7078c8c39a1997a64b23fced89c 503 Gene3D G3DSA:1.10.8.870 407 493 1.1E-14 T 13-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 P40_11225 ad03e7078c8c39a1997a64b23fced89c 503 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 422 475 1.1E-8 T 13-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 P40_11225 ad03e7078c8c39a1997a64b23fced89c 503 SUPERFAMILY SSF51905 17 390 3.08E-31 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_09225 80859ecef147877a87cc07559c85a03a 212 Pfam PF01351 Ribonuclease HII 28 202 2.0E-42 T 13-10-2018 IPR024567 Ribonuclease HII/HIII domain P40_09225 80859ecef147877a87cc07559c85a03a 212 Hamap MF_00052_B Ribonuclease HII [rnhB]. 26 205 37.229 T 13-10-2018 IPR022898 Ribonuclease HII GO:0004523 P40_09225 80859ecef147877a87cc07559c85a03a 212 Gene3D G3DSA:3.30.420.10 15 212 6.6E-72 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_09225 80859ecef147877a87cc07559c85a03a 212 SUPERFAMILY SSF53098 19 210 9.1E-67 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_20975 24dd87cf9f06f89fd6a2b6870374a0fd 299 SUPERFAMILY SSF53850 89 294 1.74E-42 T 13-10-2018 P40_20975 24dd87cf9f06f89fd6a2b6870374a0fd 299 Pfam PF03466 LysR substrate binding domain 89 293 3.6E-41 T 13-10-2018 IPR005119 LysR, substrate-binding P40_20975 24dd87cf9f06f89fd6a2b6870374a0fd 299 Gene3D G3DSA:3.40.190.290 92 294 1.8E-40 T 13-10-2018 P40_20975 24dd87cf9f06f89fd6a2b6870374a0fd 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.2E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20975 24dd87cf9f06f89fd6a2b6870374a0fd 299 Gene3D G3DSA:1.10.10.10 3 90 4.0E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_20975 24dd87cf9f06f89fd6a2b6870374a0fd 299 SUPERFAMILY SSF46785 2 113 2.04E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_18315 d9035241d6399ccce27e0e8b8dc03b30 180 SUPERFAMILY SSF50104 124 179 2.28E-19 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily P40_18315 d9035241d6399ccce27e0e8b8dc03b30 180 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 180 23.9 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 P40_18315 d9035241d6399ccce27e0e8b8dc03b30 180 Pfam PF02357 Transcription termination factor nusG 3 110 1.8E-25 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 P40_18315 d9035241d6399ccce27e0e8b8dc03b30 180 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 179 4.6E-68 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 P40_18315 d9035241d6399ccce27e0e8b8dc03b30 180 SMART SM00739 126 153 1.9E-7 T 13-10-2018 IPR005824 KOW P40_18315 d9035241d6399ccce27e0e8b8dc03b30 180 Gene3D G3DSA:3.30.70.940 1 120 2.6E-44 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 P40_18315 d9035241d6399ccce27e0e8b8dc03b30 180 Pfam PF00467 KOW motif 129 159 5.5E-9 T 13-10-2018 IPR005824 KOW P40_18315 d9035241d6399ccce27e0e8b8dc03b30 180 Gene3D G3DSA:2.30.30.30 121 179 7.7E-25 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 P40_18315 d9035241d6399ccce27e0e8b8dc03b30 180 ProSitePatterns PS01014 Transcription termination factor nusG signature. 163 172 - T 13-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site P40_18315 d9035241d6399ccce27e0e8b8dc03b30 180 SMART SM00738 2 114 2.9E-44 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 P40_18315 d9035241d6399ccce27e0e8b8dc03b30 180 SUPERFAMILY SSF82679 3 116 1.26E-38 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 P40_18315 d9035241d6399ccce27e0e8b8dc03b30 180 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.4E-19 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 P40_18315 d9035241d6399ccce27e0e8b8dc03b30 180 PRINTS PR00338 Transcription termination factor NUSG signature 156 172 1.4E-19 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 P40_18315 d9035241d6399ccce27e0e8b8dc03b30 180 PRINTS PR00338 Transcription termination factor NUSG signature 138 153 1.4E-19 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 P40_04170 727f58dcd5e50400568d6a2c680a6f6e 216 Pfam PF00072 Response regulator receiver domain 4 116 2.2E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04170 727f58dcd5e50400568d6a2c680a6f6e 216 SMART SM00448 2 116 5.3E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04170 727f58dcd5e50400568d6a2c680a6f6e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 5.5E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04170 727f58dcd5e50400568d6a2c680a6f6e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 5.5E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04170 727f58dcd5e50400568d6a2c680a6f6e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 5.5E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04170 727f58dcd5e50400568d6a2c680a6f6e 216 Gene3D G3DSA:3.40.50.2300 1 130 3.5E-25 T 13-10-2018 P40_04170 727f58dcd5e50400568d6a2c680a6f6e 216 SUPERFAMILY SSF52172 1 129 1.35E-25 T 13-10-2018 IPR011006 CheY-like superfamily P40_04170 727f58dcd5e50400568d6a2c680a6f6e 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04170 727f58dcd5e50400568d6a2c680a6f6e 216 Gene3D G3DSA:1.10.10.10 149 214 2.1E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_04170 727f58dcd5e50400568d6a2c680a6f6e 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 203 3.0E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04170 727f58dcd5e50400568d6a2c680a6f6e 216 SUPERFAMILY SSF46894 140 207 1.16E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_04170 727f58dcd5e50400568d6a2c680a6f6e 216 SMART SM00421 148 205 4.9E-22 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_13475 c3dd9aab7fd0ee1dd87a9ca9b8a6097d 404 SUPERFAMILY SSF56281 9 402 3.64E-69 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_13475 c3dd9aab7fd0ee1dd87a9ca9b8a6097d 404 Pfam PF14863 Alkyl sulfatase dimerisation 263 402 4.9E-29 T 13-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 P40_13475 c3dd9aab7fd0ee1dd87a9ca9b8a6097d 404 Gene3D G3DSA:3.60.15.30 4 261 1.1E-32 T 13-10-2018 P40_13475 c3dd9aab7fd0ee1dd87a9ca9b8a6097d 404 Gene3D G3DSA:1.25.40.880 262 404 5.7E-23 T 13-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily P40_13475 c3dd9aab7fd0ee1dd87a9ca9b8a6097d 404 SMART SM00849 25 226 1.1E-8 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_13475 c3dd9aab7fd0ee1dd87a9ca9b8a6097d 404 Pfam PF00753 Metallo-beta-lactamase superfamily 23 224 4.0E-15 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_15430 1fb576cb38349d95bc5505b9ceef17aa 287 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 285 4.6E-138 T 13-10-2018 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase GO:0008687 KEGG: 00350+1.13.11.15 P40_15430 1fb576cb38349d95bc5505b9ceef17aa 287 Gene3D G3DSA:3.40.830.10 1 286 4.8E-82 T 13-10-2018 P40_15430 1fb576cb38349d95bc5505b9ceef17aa 287 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 283 3.9E-68 T 13-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 P40_15430 1fb576cb38349d95bc5505b9ceef17aa 287 SUPERFAMILY SSF53213 12 283 4.19E-48 T 13-10-2018 P40_10685 06fd861a74deb2130c3ef886e10b592d 400 SUPERFAMILY SSF53067 32 129 2.59E-13 T 13-10-2018 P40_10685 06fd861a74deb2130c3ef886e10b592d 400 Gene3D G3DSA:3.30.1360.100 313 399 1.6E-11 T 13-10-2018 P40_10685 06fd861a74deb2130c3ef886e10b592d 400 Pfam PF12693 GspL periplasmic domain 243 394 7.9E-24 T 13-10-2018 IPR025691 GspL periplasmic domain P40_10685 06fd861a74deb2130c3ef886e10b592d 400 PIRSF PIRSF015761 3 400 1.5E-69 T 13-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 P40_10685 06fd861a74deb2130c3ef886e10b592d 400 Pfam PF05134 Type II secretion system (T2SS), protein L 47 180 8.6E-10 T 13-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain P40_10685 06fd861a74deb2130c3ef886e10b592d 400 Gene3D G3DSA:3.30.420.380 22 148 2.1E-17 T 13-10-2018 P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 PIRSF PIRSF001553 1 290 5.8E-135 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 SUPERFAMILY SSF51735 1 123 9.46E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 SMART SM00881 4 100 4.6E-39 T 13-10-2018 IPR003781 CoA-binding GO:0048037 P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 Pfam PF00549 CoA-ligase 152 273 3.4E-22 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 Pfam PF02629 CoA binding domain 6 99 5.8E-33 T 13-10-2018 IPR003781 CoA-binding GO:0048037 P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 Gene3D G3DSA:3.40.50.720 2 124 6.0E-53 T 13-10-2018 P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 Gene3D G3DSA:3.40.50.261 125 289 1.4E-76 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 289 43.988 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 1.8E-40 T 13-10-2018 P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 PRINTS PR01798 Succinyl-CoA synthase signature 209 222 1.8E-40 T 13-10-2018 P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.8E-40 T 13-10-2018 P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 PRINTS PR01798 Succinyl-CoA synthase signature 178 196 1.8E-40 T 13-10-2018 P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 SUPERFAMILY SSF52210 124 285 3.27E-57 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 153 182 - T 13-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 3.6E-144 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P40_12950 f738e6a73fb387a08b2d4c0a46bf65dd 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 13-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site P40_02025 8f9074064d0dfb1c9ac5e2efc4bee08f 356 SUPERFAMILY SSF111369 37 263 6.8E-27 T 13-10-2018 P40_02025 8f9074064d0dfb1c9ac5e2efc4bee08f 356 Gene3D G3DSA:1.10.287.470 80 152 1.4E-76 T 13-10-2018 P40_02025 8f9074064d0dfb1c9ac5e2efc4bee08f 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 249 8.4E-22 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain P40_02025 8f9074064d0dfb1c9ac5e2efc4bee08f 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 30 341 2.3E-75 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 P40_02025 8f9074064d0dfb1c9ac5e2efc4bee08f 356 Gene3D G3DSA:2.40.30.170 34 268 1.4E-76 T 13-10-2018 P40_02025 8f9074064d0dfb1c9ac5e2efc4bee08f 356 Gene3D G3DSA:2.40.420.20 269 339 1.4E-76 T 13-10-2018 P40_02025 8f9074064d0dfb1c9ac5e2efc4bee08f 356 Gene3D G3DSA:2.40.50.100 46 192 1.4E-76 T 13-10-2018 P40_17820 888c66a1151e4d109ba214903e09c10a 861 Gene3D G3DSA:3.40.50.300 343 547 1.8E-71 T 13-10-2018 P40_17820 888c66a1151e4d109ba214903e09c10a 861 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 P40_17820 888c66a1151e4d109ba214903e09c10a 861 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 P40_17820 888c66a1151e4d109ba214903e09c10a 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 3.1E-11 T 13-10-2018 IPR004176 Clp, N-terminal P40_17820 888c66a1151e4d109ba214903e09c10a 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 64 7.2E-11 T 13-10-2018 IPR004176 Clp, N-terminal P40_17820 888c66a1151e4d109ba214903e09c10a 861 Gene3D G3DSA:3.40.50.300 148 342 5.8E-75 T 13-10-2018 P40_17820 888c66a1151e4d109ba214903e09c10a 861 SUPERFAMILY SSF81923 4 156 1.96E-40 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 P40_17820 888c66a1151e4d109ba214903e09c10a 861 SMART SM01086 769 858 4.1E-38 T 13-10-2018 IPR019489 Clp ATPase, C-terminal P40_17820 888c66a1151e4d109ba214903e09c10a 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 1.9E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 P40_17820 888c66a1151e4d109ba214903e09c10a 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 1.9E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 P40_17820 888c66a1151e4d109ba214903e09c10a 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 1.9E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 P40_17820 888c66a1151e4d109ba214903e09c10a 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 1.9E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 P40_17820 888c66a1151e4d109ba214903e09c10a 861 SMART SM00382 600 738 8.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_17820 888c66a1151e4d109ba214903e09c10a 861 SMART SM00382 198 343 1.7E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_17820 888c66a1151e4d109ba214903e09c10a 861 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 13-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 P40_17820 888c66a1151e4d109ba214903e09c10a 861 Pfam PF07724 AAA domain (Cdc48 subfamily) 599 762 1.0E-54 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_17820 888c66a1151e4d109ba214903e09c10a 861 Gene3D G3DSA:3.40.50.300 553 767 1.2E-88 T 13-10-2018 P40_17820 888c66a1151e4d109ba214903e09c10a 861 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 2.4E-13 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_17820 888c66a1151e4d109ba214903e09c10a 861 SUPERFAMILY SSF52540 549 857 4.05E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_17820 888c66a1151e4d109ba214903e09c10a 861 Gene3D G3DSA:1.10.8.60 769 860 2.5E-28 T 13-10-2018 P40_17820 888c66a1151e4d109ba214903e09c10a 861 Gene3D G3DSA:1.10.1780.10 1 147 7.8E-34 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 P40_17820 888c66a1151e4d109ba214903e09c10a 861 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 849 2.8E-25 T 13-10-2018 IPR019489 Clp ATPase, C-terminal P40_17820 888c66a1151e4d109ba214903e09c10a 861 SUPERFAMILY SSF52540 159 548 9.37E-101 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18715 bb42759bb9804974f43cd86ab2ba1292 205 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 205 28.17 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 P40_18715 bb42759bb9804974f43cd86ab2ba1292 205 Gene3D G3DSA:3.40.50.150 27 205 1.3E-56 T 13-10-2018 P40_18715 bb42759bb9804974f43cd86ab2ba1292 205 Pfam PF01728 FtsJ-like methyltransferase 28 199 2.0E-53 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 P40_18715 bb42759bb9804974f43cd86ab2ba1292 205 PIRSF PIRSF005461 1 205 2.5E-75 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 P40_18715 bb42759bb9804974f43cd86ab2ba1292 205 SUPERFAMILY SSF53335 27 201 7.01E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_12910 4dc7134924bd89f09e83bb9c590cd47c 299 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 295 2.3E-98 T 13-10-2018 IPR010099 Epimerase family protein SDR39U1 P40_12910 4dc7134924bd89f09e83bb9c590cd47c 299 Gene3D G3DSA:3.40.50.720 2 299 3.6E-76 T 13-10-2018 P40_12910 4dc7134924bd89f09e83bb9c590cd47c 299 Pfam PF08338 Domain of unknown function (DUF1731) 252 298 9.4E-21 T 13-10-2018 IPR013549 Domain of unknown function DUF1731 P40_12910 4dc7134924bd89f09e83bb9c590cd47c 299 SUPERFAMILY SSF51735 2 299 4.65E-42 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_12910 4dc7134924bd89f09e83bb9c590cd47c 299 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 217 5.1E-18 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 P40_15790 5de8b7d531e45caa6d2b2a2631d03b3b 503 SUPERFAMILY SSF56300 176 433 6.65E-41 T 13-10-2018 P40_15790 5de8b7d531e45caa6d2b2a2631d03b3b 503 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 69 166 1.1E-12 T 13-10-2018 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 P40_15790 5de8b7d531e45caa6d2b2a2631d03b3b 503 Gene3D G3DSA:3.60.21.10 174 448 4.4E-48 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like P40_15790 5de8b7d531e45caa6d2b2a2631d03b3b 503 SUPERFAMILY SSF49363 65 165 4.97E-10 T 13-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 P40_15790 5de8b7d531e45caa6d2b2a2631d03b3b 503 Pfam PF00149 Calcineurin-like phosphoesterase 176 365 3.8E-19 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 P40_20990 e923c90a69b64fd54ca8fd826acf2e37 369 Gene3D G3DSA:3.40.190.170 26 344 1.5E-66 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_20990 e923c90a69b64fd54ca8fd826acf2e37 369 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 313 2.2E-31 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_08410 064a693a084579f6b96e285bb45fdc68 771 Hamap MF_01588 DNA ligase [ligA]. 7 764 55.822 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 P40_08410 064a693a084579f6b96e285bb45fdc68 771 SMART SM00278 451 470 9.8 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 P40_08410 064a693a084579f6b96e285bb45fdc68 771 SMART SM00278 485 504 51.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 P40_08410 064a693a084579f6b96e285bb45fdc68 771 SMART SM00278 549 568 550.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 P40_08410 064a693a084579f6b96e285bb45fdc68 771 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 336 351 - T 13-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site P40_08410 064a693a084579f6b96e285bb45fdc68 771 Gene3D G3DSA:3.30.470.90 74 322 5.5E-102 T 13-10-2018 P40_08410 064a693a084579f6b96e285bb45fdc68 771 Gene3D G3DSA:3.40.50.10190 665 765 3.1E-26 T 13-10-2018 IPR036420 BRCT domain superfamily P40_08410 064a693a084579f6b96e285bb45fdc68 771 SMART SM00292 690 767 9.7E-7 T 13-10-2018 IPR001357 BRCT domain P40_08410 064a693a084579f6b96e285bb45fdc68 771 Gene3D G3DSA:1.10.150.20 511 590 2.6E-23 T 13-10-2018 P40_08410 064a693a084579f6b96e285bb45fdc68 771 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 327 403 5.4E-36 T 13-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 P40_08410 064a693a084579f6b96e285bb45fdc68 771 SUPERFAMILY SSF47781 409 587 3.34E-54 T 13-10-2018 IPR010994 RuvA domain 2-like P40_08410 064a693a084579f6b96e285bb45fdc68 771 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 693 762 2.8E-9 T 13-10-2018 IPR001357 BRCT domain P40_08410 064a693a084579f6b96e285bb45fdc68 771 SUPERFAMILY SSF56091 9 321 5.33E-124 T 13-10-2018 P40_08410 064a693a084579f6b96e285bb45fdc68 771 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 120 149 - T 13-10-2018 IPR018239 NAD-dependent DNA ligase, active site P40_08410 064a693a084579f6b96e285bb45fdc68 771 SMART SM00532 8 453 3.9E-275 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 P40_08410 064a693a084579f6b96e285bb45fdc68 771 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 11 323 3.5E-134 T 13-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 P40_08410 064a693a084579f6b96e285bb45fdc68 771 Pfam PF12826 Helix-hairpin-helix motif 515 578 1.1E-17 T 13-10-2018 P40_08410 064a693a084579f6b96e285bb45fdc68 771 Gene3D G3DSA:2.20.70.80 396 436 1.9E-16 T 13-10-2018 P40_08410 064a693a084579f6b96e285bb45fdc68 771 SUPERFAMILY SSF50249 323 404 1.4E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_08410 064a693a084579f6b96e285bb45fdc68 771 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 16 589 4.2E-230 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 P40_08410 064a693a084579f6b96e285bb45fdc68 771 Pfam PF14520 Helix-hairpin-helix domain 451 505 1.8E-6 T 13-10-2018 P40_08410 064a693a084579f6b96e285bb45fdc68 771 SUPERFAMILY SSF52113 689 764 3.92E-17 T 13-10-2018 IPR036420 BRCT domain superfamily P40_08410 064a693a084579f6b96e285bb45fdc68 771 PIRSF PIRSF001604 2 604 9.4E-220 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 P40_08410 064a693a084579f6b96e285bb45fdc68 771 PIRSF PIRSF001604 610 768 5.0E-25 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 P40_08410 064a693a084579f6b96e285bb45fdc68 771 Gene3D G3DSA:2.40.50.140 323 395 1.9E-35 T 13-10-2018 P40_08410 064a693a084579f6b96e285bb45fdc68 771 Gene3D G3DSA:1.10.287.610 8 73 8.3E-28 T 13-10-2018 P40_08410 064a693a084579f6b96e285bb45fdc68 771 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 412 439 3.0E-9 T 13-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 P40_08410 064a693a084579f6b96e285bb45fdc68 771 Gene3D G3DSA:1.10.150.20 437 510 1.8E-29 T 13-10-2018 P40_06365 75d1c6c5fb512c6e09a773758533b109 434 Gene3D G3DSA:3.40.640.10 117 330 2.7E-47 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_06365 75d1c6c5fb512c6e09a773758533b109 434 SUPERFAMILY SSF46785 9 79 1.52E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_06365 75d1c6c5fb512c6e09a773758533b109 434 Gene3D G3DSA:3.90.1150.10 88 419 2.7E-47 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_06365 75d1c6c5fb512c6e09a773758533b109 434 Gene3D G3DSA:1.10.10.10 9 76 1.2E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_06365 75d1c6c5fb512c6e09a773758533b109 434 SUPERFAMILY SSF53383 85 431 2.79E-55 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_06365 75d1c6c5fb512c6e09a773758533b109 434 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 3.5E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_06365 75d1c6c5fb512c6e09a773758533b109 434 Pfam PF00155 Aminotransferase class I and II 88 419 2.4E-18 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_06365 75d1c6c5fb512c6e09a773758533b109 434 SMART SM00345 11 70 3.2E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_16985 acb44e8e15e45b936938ab8621aea24f 448 Pfam PF13163 Protein of unknown function (DUF3999) 26 441 1.1E-104 T 13-10-2018 IPR025060 Protein of unknown function DUF3999 P40_03720 2a9bf2a7463394ced83b794181433b29 113 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 5.3E-35 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03720 2a9bf2a7463394ced83b794181433b29 113 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 13-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 P40_03720 2a9bf2a7463394ced83b794181433b29 113 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.736 T 13-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 P40_03720 2a9bf2a7463394ced83b794181433b29 113 Gene3D G3DSA:3.30.70.60 1 92 3.1E-33 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 P40_03720 2a9bf2a7463394ced83b794181433b29 113 Pfam PF01250 Ribosomal protein S6 3 91 4.2E-28 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03720 2a9bf2a7463394ced83b794181433b29 113 SUPERFAMILY SSF54995 1 102 8.63E-39 T 13-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_05710 4960373ff18903cb67d188be07a40e09 372 PIRSF PIRSF004640 1 363 1.2E-152 T 13-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 P40_05710 4960373ff18903cb67d188be07a40e09 372 Pfam PF04551 GcpE protein 13 353 2.9E-136 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 P40_05710 4960373ff18903cb67d188be07a40e09 372 SUPERFAMILY SSF51717 16 208 5.65E-11 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_05710 4960373ff18903cb67d188be07a40e09 372 Gene3D G3DSA:3.30.413.10 262 363 2.6E-27 T 13-10-2018 P40_05710 4960373ff18903cb67d188be07a40e09 372 Gene3D G3DSA:3.20.20.20 2 261 9.6E-108 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_05710 4960373ff18903cb67d188be07a40e09 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 352 4.4E-136 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 P40_05710 4960373ff18903cb67d188be07a40e09 372 SUPERFAMILY SSF56014 266 353 1.15E-13 T 13-10-2018 P40_05710 4960373ff18903cb67d188be07a40e09 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 357 35.379 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 P40_16820 05044ef27ed341fae7d444e2ff4aa98b 284 PIRSF PIRSF005052 1 284 6.8E-108 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 P40_16820 05044ef27ed341fae7d444e2ff4aa98b 284 Pfam PF03668 P-loop ATPase protein family 1 283 4.5E-98 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 P40_16820 05044ef27ed341fae7d444e2ff4aa98b 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 284 40.525 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 P40_16820 05044ef27ed341fae7d444e2ff4aa98b 284 SUPERFAMILY SSF52540 1 156 1.74E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_16820 05044ef27ed341fae7d444e2ff4aa98b 284 Gene3D G3DSA:3.40.50.300 2 164 2.6E-6 T 13-10-2018 P40_17295 a8fe19cc83b8f15f2bcb7f28b97e0b47 296 Gene3D G3DSA:1.10.1020.10 58 159 1.6E-27 T 13-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 P40_17295 a8fe19cc83b8f15f2bcb7f28b97e0b47 296 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 179 191 2.8E-12 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 P40_17295 a8fe19cc83b8f15f2bcb7f28b97e0b47 296 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 51 64 2.8E-12 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 P40_17295 a8fe19cc83b8f15f2bcb7f28b97e0b47 296 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 2.8E-12 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 P40_17295 a8fe19cc83b8f15f2bcb7f28b97e0b47 296 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 2.8E-12 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 P40_17295 a8fe19cc83b8f15f2bcb7f28b97e0b47 296 SUPERFAMILY SSF53335 6 266 3.65E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_17295 a8fe19cc83b8f15f2bcb7f28b97e0b47 296 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 220 2.2E-15 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 P40_17295 a8fe19cc83b8f15f2bcb7f28b97e0b47 296 PIRSF PIRSF000398 1 271 3.8E-35 T 13-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 P40_17295 a8fe19cc83b8f15f2bcb7f28b97e0b47 296 Gene3D G3DSA:3.40.50.150 7 234 1.6E-27 T 13-10-2018 P40_04065 a7ca3d023b225b3eb48ca06dd3c3e714 159 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 11 142 22.707 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 P40_04065 a7ca3d023b225b3eb48ca06dd3c3e714 159 SUPERFAMILY SSF48013 11 142 2.75E-42 T 13-10-2018 IPR035926 NusB-like superfamily P40_04065 a7ca3d023b225b3eb48ca06dd3c3e714 159 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 13 140 3.5E-43 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 P40_04065 a7ca3d023b225b3eb48ca06dd3c3e714 159 Pfam PF01029 NusB family 14 139 9.0E-33 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 P40_04065 a7ca3d023b225b3eb48ca06dd3c3e714 159 Gene3D G3DSA:1.10.940.10 6 146 2.3E-48 T 13-10-2018 IPR035926 NusB-like superfamily P40_05045 b11772bc8b75f519861468624a055559 497 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 62 465 2.5E-74 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P40_05045 b11772bc8b75f519861468624a055559 497 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 62 458 2.5E-55 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P40_05045 b11772bc8b75f519861468624a055559 497 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 298 320 4.4E-18 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P40_05045 b11772bc8b75f519861468624a055559 497 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 67 86 4.4E-18 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P40_05045 b11772bc8b75f519861468624a055559 497 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 435 448 4.4E-18 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P40_05045 b11772bc8b75f519861468624a055559 497 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 373 387 4.4E-18 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P40_05045 b11772bc8b75f519861468624a055559 497 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 358 372 4.4E-18 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P40_05045 b11772bc8b75f519861468624a055559 497 SUPERFAMILY SSF56601 26 478 1.24E-82 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like P40_05045 b11772bc8b75f519861468624a055559 497 Gene3D G3DSA:3.50.80.20 91 159 9.0E-19 T 13-10-2018 P40_05045 b11772bc8b75f519861468624a055559 497 Gene3D G3DSA:3.40.710.10 282 478 1.9E-48 T 13-10-2018 P40_16085 475d28f4bad935e43cf25f0a5113b30e 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 86 1.3E-31 T 13-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 P40_16085 475d28f4bad935e43cf25f0a5113b30e 89 PIRSF PIRSF004669 1 89 8.3E-34 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 P40_16085 475d28f4bad935e43cf25f0a5113b30e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.5E-23 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 P40_16085 475d28f4bad935e43cf25f0a5113b30e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.5E-23 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 P40_16085 475d28f4bad935e43cf25f0a5113b30e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.5E-23 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 P40_16085 475d28f4bad935e43cf25f0a5113b30e 89 Pfam PF01313 Bacterial export proteins, family 3 6 78 1.9E-29 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 P40_08510 37253c06e29b7ce42a2ef65a286b64f0 275 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 34 270 6.2E-60 T 13-10-2018 P40_08510 37253c06e29b7ce42a2ef65a286b64f0 275 SUPERFAMILY SSF51735 20 272 1.4E-75 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_08510 37253c06e29b7ce42a2ef65a286b64f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 214 1.4E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_08510 37253c06e29b7ce42a2ef65a286b64f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 29 46 1.4E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_08510 37253c06e29b7ce42a2ef65a286b64f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 234 254 1.4E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_08510 37253c06e29b7ce42a2ef65a286b64f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 166 1.4E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_08510 37253c06e29b7ce42a2ef65a286b64f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 195 1.4E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_08510 37253c06e29b7ce42a2ef65a286b64f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 103 114 1.4E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_08510 37253c06e29b7ce42a2ef65a286b64f0 275 Gene3D G3DSA:3.40.50.720 8 272 2.5E-80 T 13-10-2018 P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 Gene3D G3DSA:3.40.50.300 1 206 6.4E-70 T 13-10-2018 P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 SUPERFAMILY SSF50465 305 397 6.33E-36 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 Pfam PF03144 Elongation factor Tu domain 2 228 296 5.3E-17 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 PRINTS PR00315 GTP-binding elongation factor signature 79 89 2.1E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 PRINTS PR00315 GTP-binding elongation factor signature 132 141 2.1E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 PRINTS PR00315 GTP-binding elongation factor signature 59 67 2.1E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.1E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 PRINTS PR00315 GTP-binding elongation factor signature 95 106 2.1E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 4.6E-15 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 Gene3D G3DSA:2.40.30.10 209 337 1.8E-53 T 13-10-2018 P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 SUPERFAMILY SSF50447 208 304 2.36E-30 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 6.8E-34 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 SUPERFAMILY SSF52540 6 222 2.94E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 397 2.0E-228 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 Gene3D G3DSA:2.40.30.10 341 396 4.3E-29 T 13-10-2018 P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 5.7E-59 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18265 f78da603e6afa0d6e0f7fa684fc53d1b 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 59.985 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 Gene3D G3DSA:3.40.50.300 1 206 6.4E-70 T 13-10-2018 P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 SUPERFAMILY SSF50465 305 397 6.33E-36 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 Pfam PF03144 Elongation factor Tu domain 2 228 296 5.3E-17 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 PRINTS PR00315 GTP-binding elongation factor signature 79 89 2.1E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 PRINTS PR00315 GTP-binding elongation factor signature 132 141 2.1E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 PRINTS PR00315 GTP-binding elongation factor signature 59 67 2.1E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.1E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 PRINTS PR00315 GTP-binding elongation factor signature 95 106 2.1E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 4.6E-15 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 Gene3D G3DSA:2.40.30.10 209 337 1.8E-53 T 13-10-2018 P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 SUPERFAMILY SSF50447 208 304 2.36E-30 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 6.8E-34 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 SUPERFAMILY SSF52540 6 222 2.94E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 397 2.0E-228 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 Gene3D G3DSA:2.40.30.10 341 396 4.3E-29 T 13-10-2018 P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 5.7E-59 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18330 f78da603e6afa0d6e0f7fa684fc53d1b 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 59.985 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P40_16550 248f8055bd48efbee8a72dfd7d5e1043 212 SUPERFAMILY SSF47616 81 209 1.42E-24 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_16550 248f8055bd48efbee8a72dfd7d5e1043 212 Gene3D G3DSA:1.20.1050.10 88 194 7.2E-78 T 13-10-2018 P40_16550 248f8055bd48efbee8a72dfd7d5e1043 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 140 194 5.1E-5 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal P40_16550 248f8055bd48efbee8a72dfd7d5e1043 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 86 2.1E-17 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_16550 248f8055bd48efbee8a72dfd7d5e1043 212 Gene3D G3DSA:3.40.30.10 10 203 7.2E-78 T 13-10-2018 P40_16550 248f8055bd48efbee8a72dfd7d5e1043 212 SUPERFAMILY SSF52833 9 107 6.85E-24 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_04775 bc217da065878aa426c75881541b0411 264 SUPERFAMILY SSF51366 14 263 4.0E-92 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 P40_04775 bc217da065878aa426c75881541b0411 264 Gene3D G3DSA:3.20.20.70 1 264 2.1E-107 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_04775 bc217da065878aa426c75881541b0411 264 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 40 260 29.478 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 P40_04775 bc217da065878aa426c75881541b0411 264 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 58 76 - T 13-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 P40_04775 bc217da065878aa426c75881541b0411 264 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 5 264 38.384 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 P40_04775 bc217da065878aa426c75881541b0411 264 Pfam PF00218 Indole-3-glycerol phosphate synthase 7 262 6.5E-98 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 P40_18590 f73e56c3a58759e5992b5b9e7fd34947 258 SUPERFAMILY SSF52096 2 258 2.06E-74 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_18590 f73e56c3a58759e5992b5b9e7fd34947 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 257 1.4E-54 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_18590 f73e56c3a58759e5992b5b9e7fd34947 258 Gene3D G3DSA:3.90.226.10 2 200 3.2E-63 T 13-10-2018 P40_18590 f73e56c3a58759e5992b5b9e7fd34947 258 Gene3D G3DSA:1.10.12.10 201 258 2.0E-13 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_18590 f73e56c3a58759e5992b5b9e7fd34947 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 P40_01175 d5b6c50bcb1ee28eb5b7f12e99686f18 191 SUPERFAMILY SSF53335 11 188 3.18E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_01175 d5b6c50bcb1ee28eb5b7f12e99686f18 191 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 125 131 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 P40_01175 d5b6c50bcb1ee28eb5b7f12e99686f18 191 PIRSF PIRSF004553 11 191 7.0E-48 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 P40_01175 d5b6c50bcb1ee28eb5b7f12e99686f18 191 Gene3D G3DSA:3.40.50.150 1 191 1.5E-56 T 13-10-2018 P40_01175 d5b6c50bcb1ee28eb5b7f12e99686f18 191 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 8 191 1.0E-48 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 P40_01175 d5b6c50bcb1ee28eb5b7f12e99686f18 191 Pfam PF03602 Conserved hypothetical protein 95 12 188 6.2E-50 T 13-10-2018 P40_07950 9857b58b5a749fb2423b9b71b6f4002c 379 Pfam PF16868 NMT1-like family 48 323 1.2E-19 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_07950 9857b58b5a749fb2423b9b71b6f4002c 379 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 8 323 9.4E-60 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_07950 9857b58b5a749fb2423b9b71b6f4002c 379 SUPERFAMILY SSF53850 34 325 2.24E-45 T 13-10-2018 P40_07950 9857b58b5a749fb2423b9b71b6f4002c 379 Gene3D G3DSA:3.40.190.10 40 323 1.1E-49 T 13-10-2018 P40_07950 9857b58b5a749fb2423b9b71b6f4002c 379 Gene3D G3DSA:3.40.190.10 118 258 1.1E-49 T 13-10-2018 P40_03170 8126fbd61996902414412208758baeb9 543 Gene3D G3DSA:1.20.58.220 330 520 5.9E-9 T 13-10-2018 IPR038078 PhoU-like domain superfamily P40_03170 8126fbd61996902414412208758baeb9 543 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 68 521 2.7E-93 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 P40_03170 8126fbd61996902414412208758baeb9 543 Pfam PF01895 PhoU domain 341 425 1.2E-4 T 13-10-2018 IPR026022 PhoU domain P40_03170 8126fbd61996902414412208758baeb9 543 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 307 1.1E-90 T 13-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 P40_03170 8126fbd61996902414412208758baeb9 543 Pfam PF02690 Na+/Pi-cotransporter 158 255 9.6E-8 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 P40_03170 8126fbd61996902414412208758baeb9 543 Pfam PF02690 Na+/Pi-cotransporter 13 147 3.2E-34 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 P40_03170 8126fbd61996902414412208758baeb9 543 SUPERFAMILY SSF109755 320 522 1.88E-25 T 13-10-2018 P40_02400 5a48a3f86e845f9a0f9bdf290a629975 192 SUPERFAMILY SSF46689 6 73 2.46E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_02400 5a48a3f86e845f9a0f9bdf290a629975 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.4E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_02400 5a48a3f86e845f9a0f9bdf290a629975 192 Gene3D G3DSA:1.10.357.10 1 189 5.3E-51 T 13-10-2018 P40_02400 5a48a3f86e845f9a0f9bdf290a629975 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 3.0E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_02400 5a48a3f86e845f9a0f9bdf290a629975 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 3.0E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_02400 5a48a3f86e845f9a0f9bdf290a629975 192 SUPERFAMILY SSF48498 79 182 1.04E-18 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_09465 92d453e449315acb49103ebdc93d2237 245 Gene3D G3DSA:2.30.210.20 6 59 2.1E-24 T 13-10-2018 P40_09465 92d453e449315acb49103ebdc93d2237 245 SUPERFAMILY SSF55729 2 222 4.5E-83 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_09465 92d453e449315acb49103ebdc93d2237 245 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 215 2.1E-54 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 P40_09465 92d453e449315acb49103ebdc93d2237 245 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 34 202 5.7E-64 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 P40_09465 92d453e449315acb49103ebdc93d2237 245 Gene3D G3DSA:3.40.630.70 60 232 1.4E-54 T 13-10-2018 P40_09465 92d453e449315acb49103ebdc93d2237 245 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 245 87.674 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 P40_17930 2cf9719fe64c2f62876bbf7bd6d41d3a 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 20 88 5.0E-17 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_17930 2cf9719fe64c2f62876bbf7bd6d41d3a 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.2E-24 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_17930 2cf9719fe64c2f62876bbf7bd6d41d3a 89 Gene3D G3DSA:1.20.58.110 1 87 7.0E-28 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_17930 2cf9719fe64c2f62876bbf7bd6d41d3a 89 Pfam PF01649 Ribosomal protein S20 2 84 4.1E-26 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_17930 2cf9719fe64c2f62876bbf7bd6d41d3a 89 SUPERFAMILY SSF46992 3 86 2.88E-29 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_17930 2cf9719fe64c2f62876bbf7bd6d41d3a 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.359 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_12940 dd99f518e00b05ae13fcbd61693f0010 261 Gene3D G3DSA:3.20.20.60 1 254 2.5E-87 T 13-10-2018 P40_12940 dd99f518e00b05ae13fcbd61693f0010 261 SUPERFAMILY SSF51621 5 251 9.81E-82 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 P40_12940 dd99f518e00b05ae13fcbd61693f0010 261 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 3 255 33.087 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 P40_12940 dd99f518e00b05ae13fcbd61693f0010 261 PIRSF PIRSF000388 1 256 5.2E-82 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 P40_12940 dd99f518e00b05ae13fcbd61693f0010 261 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 250 1.5E-85 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 P40_12940 dd99f518e00b05ae13fcbd61693f0010 261 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 4 252 1.3E-77 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 P40_02515 32c418dfec9947cd323dcfaf929c62d2 514 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 513 1.7E-190 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 P40_02515 32c418dfec9947cd323dcfaf929c62d2 514 Gene3D G3DSA:3.90.228.20 198 498 1.9E-201 T 13-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 P40_02515 32c418dfec9947cd323dcfaf929c62d2 514 SUPERFAMILY SSF68923 5 197 6.1E-70 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 P40_02515 32c418dfec9947cd323dcfaf929c62d2 514 Gene3D G3DSA:3.40.449.10 15 197 1.9E-201 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 P40_02515 32c418dfec9947cd323dcfaf929c62d2 514 Gene3D G3DSA:2.170.8.10 25 312 1.9E-201 T 13-10-2018 P40_02515 32c418dfec9947cd323dcfaf929c62d2 514 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 1 514 50.713 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 P40_02515 32c418dfec9947cd323dcfaf929c62d2 514 Pfam PF01293 Phosphoenolpyruvate carboxykinase 6 466 2.5E-194 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 P40_02515 32c418dfec9947cd323dcfaf929c62d2 514 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 235 250 - T 13-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 P40_02515 32c418dfec9947cd323dcfaf929c62d2 514 SUPERFAMILY SSF53795 198 513 9.61E-128 T 13-10-2018 P40_02515 32c418dfec9947cd323dcfaf929c62d2 514 PIRSF PIRSF006294 2 514 2.0E-210 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 P40_11670 8197d65834646528ee07597eae408f27 495 SUPERFAMILY SSF53474 116 437 2.41E-9 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_11670 8197d65834646528ee07597eae408f27 495 Gene3D G3DSA:3.40.50.1820 273 474 6.9E-7 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_05750 bb9db56167b0b37f4f185a56ee8c1d9a 450 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 10 346 3.3E-131 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 P40_05750 bb9db56167b0b37f4f185a56ee8c1d9a 450 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 6 441 30.605 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 P40_05750 bb9db56167b0b37f4f185a56ee8c1d9a 450 Pfam PF02601 Exonuclease VII, large subunit 125 438 5.4E-101 T 13-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 P40_05750 bb9db56167b0b37f4f185a56ee8c1d9a 450 Pfam PF13742 OB-fold nucleic acid binding domain 9 102 4.0E-27 T 13-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 P40_15750 916a965547ae267fadf9b4ac573b2bc4 404 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 258 375 3.4E-29 T 13-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal P40_15750 916a965547ae267fadf9b4ac573b2bc4 404 SMART SM00833 258 375 2.7E-52 T 13-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal P40_15750 916a965547ae267fadf9b4ac573b2bc4 404 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 212 2.1E-57 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain P40_15750 916a965547ae267fadf9b4ac573b2bc4 404 SUPERFAMILY SSF52540 4 312 2.66E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_15750 916a965547ae267fadf9b4ac573b2bc4 404 Gene3D G3DSA:3.40.50.300 4 231 1.3E-71 T 13-10-2018 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 PRINTS PR00691 Adhesin B signature 46 64 4.0E-34 T 13-10-2018 IPR006129 Adhesin B GO:0007155 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 PRINTS PR00691 Adhesin B signature 21 42 4.0E-34 T 13-10-2018 IPR006129 Adhesin B GO:0007155 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 PRINTS PR00691 Adhesin B signature 202 220 4.0E-34 T 13-10-2018 IPR006129 Adhesin B GO:0007155 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 PRINTS PR00691 Adhesin B signature 65 84 4.0E-34 T 13-10-2018 IPR006129 Adhesin B GO:0007155 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 PRINTS PR00691 Adhesin B signature 225 242 4.0E-34 T 13-10-2018 IPR006129 Adhesin B GO:0007155 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 PRINTS PR00691 Adhesin B signature 247 265 4.0E-34 T 13-10-2018 IPR006129 Adhesin B GO:0007155 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 PRINTS PR00691 Adhesin B signature 176 193 4.0E-34 T 13-10-2018 IPR006129 Adhesin B GO:0007155 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 SUPERFAMILY SSF53807 18 290 2.89E-91 T 13-10-2018 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 PRINTS PR00690 Adhesin family signature 176 197 4.2E-40 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 PRINTS PR00690 Adhesin family signature 229 247 4.2E-40 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 PRINTS PR00690 Adhesin family signature 255 274 4.2E-40 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 PRINTS PR00690 Adhesin family signature 21 39 4.2E-40 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 PRINTS PR00690 Adhesin family signature 65 82 4.2E-40 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 PRINTS PR00690 Adhesin family signature 52 65 4.2E-40 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 Gene3D G3DSA:3.40.50.1980 20 177 2.0E-55 T 13-10-2018 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 Pfam PF01297 Zinc-uptake complex component A periplasmic 24 287 1.7E-74 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 P40_06395 7ad3b2962444221f1218a7173103c0fa 291 Gene3D G3DSA:3.40.50.1980 178 289 9.0E-40 T 13-10-2018 P40_02940 e8c2fd505c5e7a9c85e194f7d8e30175 109 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 92 21.237 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 P40_02940 e8c2fd505c5e7a9c85e194f7d8e30175 109 Gene3D G3DSA:1.10.287.1080 1 98 2.3E-29 T 13-10-2018 P40_02940 e8c2fd505c5e7a9c85e194f7d8e30175 109 SUPERFAMILY SSF101386 3 96 3.74E-25 T 13-10-2018 P40_02940 e8c2fd505c5e7a9c85e194f7d8e30175 109 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 5 95 1.6E-17 T 13-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 P40_02940 e8c2fd505c5e7a9c85e194f7d8e30175 109 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 92 1.3E-29 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 315 5.2E-13 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 Gene3D G3DSA:3.40.50.300 164 353 1.2E-64 T 13-10-2018 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 SUPERFAMILY SSF52540 170 433 2.68E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 13-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 Gene3D G3DSA:1.10.1780.10 1 144 2.8E-43 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 SMART SM01086 656 746 1.2E-27 T 13-10-2018 IPR019489 Clp ATPase, C-terminal P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 4.1E-15 T 13-10-2018 IPR004176 Clp, N-terminal P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 Gene3D G3DSA:1.10.8.60 656 756 8.8E-28 T 13-10-2018 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 8.0E-38 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 8.0E-38 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 8.0E-38 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 8.0E-38 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 737 1.6E-23 T 13-10-2018 IPR019489 Clp ATPase, C-terminal P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 4.5E-48 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 SUPERFAMILY SSF81923 1 143 3.14E-59 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 SMART SM00382 490 658 8.6E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 SMART SM00382 209 354 6.8E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 SUPERFAMILY SSF52540 440 745 1.77E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 Gene3D G3DSA:3.40.50.300 442 655 4.0E-81 T 13-10-2018 P40_09440 bd9c0282c9636f6aaa651741e07f3452 757 Gene3D G3DSA:1.10.8.60 354 441 5.3E-33 T 13-10-2018 P40_03740 4c2be879b9993ee6a198f37101ac63a8 463 Gene3D G3DSA:3.40.50.300 174 457 3.1E-107 T 13-10-2018 P40_03740 4c2be879b9993ee6a198f37101ac63a8 463 Pfam PF03796 DnaB-like helicase C terminal domain 195 450 9.3E-115 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 P40_03740 4c2be879b9993ee6a198f37101ac63a8 463 SUPERFAMILY SSF52540 193 444 5.15E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03740 4c2be879b9993ee6a198f37101ac63a8 463 SUPERFAMILY SSF48024 16 127 2.35E-39 T 13-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 P40_03740 4c2be879b9993ee6a198f37101ac63a8 463 SMART SM00382 212 410 7.2E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_03740 4c2be879b9993ee6a198f37101ac63a8 463 Pfam PF00772 DnaB-like helicase N terminal domain 18 119 2.5E-37 T 13-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 P40_03740 4c2be879b9993ee6a198f37101ac63a8 463 Gene3D G3DSA:1.10.860.10 13 173 1.4E-55 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal P40_03740 4c2be879b9993ee6a198f37101ac63a8 463 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 18 452 2.0E-180 T 13-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 P40_05080 9595c055e8a44496ff9fdaa51c1b33d4 287 Gene3D G3DSA:3.30.470.10 1 120 9.8E-35 T 13-10-2018 P40_05080 9595c055e8a44496ff9fdaa51c1b33d4 287 Gene3D G3DSA:3.20.10.10 124 283 1.1E-57 T 13-10-2018 P40_05080 9595c055e8a44496ff9fdaa51c1b33d4 287 SUPERFAMILY SSF56752 4 279 2.49E-78 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 P40_05080 9595c055e8a44496ff9fdaa51c1b33d4 287 ProSitePatterns PS00770 Aminotransferases class-IV signature. 182 211 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 P40_05080 9595c055e8a44496ff9fdaa51c1b33d4 287 Pfam PF01063 Amino-transferase class IV 30 255 1.1E-53 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 P40_16465 f622f9de62305c42f0324fbd04d002f6 443 SUPERFAMILY SSF63418 1 92 3.4E-23 T 13-10-2018 IPR035911 MurE/MurF, N-terminal P40_16465 f622f9de62305c42f0324fbd04d002f6 443 Pfam PF08245 Mur ligase middle domain 103 286 1.1E-44 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 P40_16465 f622f9de62305c42f0324fbd04d002f6 443 SUPERFAMILY SSF53623 98 300 1.22E-45 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 P40_16465 f622f9de62305c42f0324fbd04d002f6 443 SUPERFAMILY SSF53244 307 436 2.01E-24 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 P40_16465 f622f9de62305c42f0324fbd04d002f6 443 Gene3D G3DSA:3.90.190.20 306 442 5.1E-27 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 P40_16465 f622f9de62305c42f0324fbd04d002f6 443 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 2 437 29.203 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_16465 f622f9de62305c42f0324fbd04d002f6 443 Gene3D G3DSA:3.40.1190.10 79 304 2.4E-62 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 P40_16465 f622f9de62305c42f0324fbd04d002f6 443 Pfam PF01225 Mur ligase family, catalytic domain 22 99 1.3E-11 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 P40_16465 f622f9de62305c42f0324fbd04d002f6 443 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 382 9.1E-8 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 P40_16465 f622f9de62305c42f0324fbd04d002f6 443 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 27 435 2.1E-104 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_16465 f622f9de62305c42f0324fbd04d002f6 443 Gene3D G3DSA:3.40.1390.10 1 78 5.1E-25 T 13-10-2018 P40_11750 cdcfd31ba72c9a3e5000154d338635c0 292 Gene3D G3DSA:3.40.190.10 91 273 6.2E-26 T 13-10-2018 P40_11750 cdcfd31ba72c9a3e5000154d338635c0 292 Gene3D G3DSA:1.10.10.10 1 90 1.6E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_11750 cdcfd31ba72c9a3e5000154d338635c0 292 SUPERFAMILY SSF46785 1 87 1.5E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_11750 cdcfd31ba72c9a3e5000154d338635c0 292 Pfam PF03466 LysR substrate binding domain 87 281 1.0E-33 T 13-10-2018 IPR005119 LysR, substrate-binding P40_11750 cdcfd31ba72c9a3e5000154d338635c0 292 SUPERFAMILY SSF53850 88 281 3.65E-30 T 13-10-2018 P40_11750 cdcfd31ba72c9a3e5000154d338635c0 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.3E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11750 cdcfd31ba72c9a3e5000154d338635c0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.1E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11750 cdcfd31ba72c9a3e5000154d338635c0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.1E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11750 cdcfd31ba72c9a3e5000154d338635c0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.1E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11750 cdcfd31ba72c9a3e5000154d338635c0 292 Gene3D G3DSA:3.40.190.10 165 264 6.2E-26 T 13-10-2018 P40_20745 63c4a456c626be54f6f2f7028a782a3a 330 SUPERFAMILY SSF46689 279 325 7.17E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_20745 63c4a456c626be54f6f2f7028a782a3a 330 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 98 201 1.1E-6 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_20745 63c4a456c626be54f6f2f7028a782a3a 330 Pfam PF12833 Helix-turn-helix domain 250 323 5.2E-13 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_20745 63c4a456c626be54f6f2f7028a782a3a 330 Gene3D G3DSA:1.10.10.60 244 328 3.4E-15 T 13-10-2018 P40_20745 63c4a456c626be54f6f2f7028a782a3a 330 SMART SM00342 245 325 2.5E-8 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_11535 6d71770adb800af3fd9a02df5dea01ce 406 SUPERFAMILY SSF103473 22 401 5.62E-56 T 13-10-2018 IPR036259 MFS transporter superfamily P40_11535 6d71770adb800af3fd9a02df5dea01ce 406 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 22 396 1.2E-68 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 P40_11535 6d71770adb800af3fd9a02df5dea01ce 406 Gene3D G3DSA:1.20.1720.10 22 399 1.6E-87 T 13-10-2018 P40_11535 6d71770adb800af3fd9a02df5dea01ce 406 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 92 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 P40_11535 6d71770adb800af3fd9a02df5dea01ce 406 Pfam PF07690 Major Facilitator Superfamily 29 360 6.5E-44 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 SUPERFAMILY SSF54980 295 373 8.99E-18 T 13-10-2018 IPR035647 EF-G domain III/V-like P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 PRINTS PR00315 GTP-binding elongation factor signature 77 87 6.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 PRINTS PR00315 GTP-binding elongation factor signature 52 60 6.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 PRINTS PR00315 GTP-binding elongation factor signature 93 104 6.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 PRINTS PR00315 GTP-binding elongation factor signature 9 22 6.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 PRINTS PR00315 GTP-binding elongation factor signature 129 138 6.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 Pfam PF03144 Elongation factor Tu domain 2 208 278 2.4E-10 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 4.7E-50 T 13-10-2018 IPR013842 GTP-binding protein LepA, C-terminal P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 Pfam PF00679 Elongation factor G C-terminus 403 487 1.4E-20 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 Gene3D G3DSA:3.30.70.2570 482 556 1.7E-31 T 13-10-2018 IPR038363 LepA, C-terminal domain superfamily P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 Gene3D G3DSA:3.40.50.300 3 188 5.8E-71 T 13-10-2018 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 3.2E-51 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 TIGRFAM TIGR01393 lepA: elongation factor 4 6 598 2.1E-293 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 599 297.259 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 SUPERFAMILY SSF52540 3 232 3.55E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 Gene3D G3DSA:3.30.70.870 289 370 3.0E-34 T 13-10-2018 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 Gene3D G3DSA:3.30.70.3380 371 481 1.8E-39 T 13-10-2018 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 Gene3D G3DSA:2.40.30.10 190 287 6.3E-32 T 13-10-2018 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 177 5.4E-18 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P40_07115 41bebe00d79f8caa2e59543e68e197c7 599 SUPERFAMILY SSF54980 403 496 1.29E-24 T 13-10-2018 IPR035647 EF-G domain III/V-like P40_08730 187886ce0760f08e6e58184a1167e26f 335 Pfam PF02780 Transketolase, C-terminal domain 208 325 2.7E-36 T 13-10-2018 IPR033248 Transketolase, C-terminal domain P40_08730 187886ce0760f08e6e58184a1167e26f 335 SUPERFAMILY SSF52518 14 198 3.89E-66 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold P40_08730 187886ce0760f08e6e58184a1167e26f 335 Gene3D G3DSA:3.40.50.970 11 198 7.6E-77 T 13-10-2018 P40_08730 187886ce0760f08e6e58184a1167e26f 335 Pfam PF02779 Transketolase, pyrimidine binding domain 14 188 2.4E-49 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain P40_08730 187886ce0760f08e6e58184a1167e26f 335 Gene3D G3DSA:3.40.50.920 208 335 8.8E-43 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 P40_08730 187886ce0760f08e6e58184a1167e26f 335 SMART SM00861 14 189 7.4E-63 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain P40_08730 187886ce0760f08e6e58184a1167e26f 335 SUPERFAMILY SSF52922 200 333 3.14E-38 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 P40_21250 2aa85552e23a7f4ca18ee5b66f16cbf7 105 SUPERFAMILY SSF46785 4 85 4.65E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_21250 2aa85552e23a7f4ca18ee5b66f16cbf7 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.0E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_21250 2aa85552e23a7f4ca18ee5b66f16cbf7 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.0E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_21250 2aa85552e23a7f4ca18ee5b66f16cbf7 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 1.0E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_21250 2aa85552e23a7f4ca18ee5b66f16cbf7 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 1.0E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_21250 2aa85552e23a7f4ca18ee5b66f16cbf7 105 Pfam PF01022 Bacterial regulatory protein, arsR family 14 59 5.3E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_21250 2aa85552e23a7f4ca18ee5b66f16cbf7 105 SMART SM00418 7 85 3.8E-26 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_21250 2aa85552e23a7f4ca18ee5b66f16cbf7 105 Gene3D G3DSA:1.10.10.10 3 90 5.2E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_03885 737bd19521ec20023cab6e9667612ed2 179 SUPERFAMILY SSF117916 25 116 3.92E-23 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily P40_03885 737bd19521ec20023cab6e9667612ed2 179 Pfam PF01883 Iron-sulfur cluster assembly protein 26 86 6.8E-14 T 13-10-2018 IPR002744 MIP18 family-like P40_03885 737bd19521ec20023cab6e9667612ed2 179 Gene3D G3DSA:3.30.300.130 21 118 7.4E-24 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily P40_03885 737bd19521ec20023cab6e9667612ed2 179 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 34 178 1.9E-57 T 13-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit P40_16095 4629d1d9c7c4886080b9bf16116f464d 397 SUPERFAMILY SSF64518 1 395 1.44E-72 T 13-10-2018 P40_16095 4629d1d9c7c4886080b9bf16116f464d 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 1.2E-20 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 P40_16095 4629d1d9c7c4886080b9bf16116f464d 397 Gene3D G3DSA:1.20.1330.10 40 211 2.2E-48 T 13-10-2018 P40_16095 4629d1d9c7c4886080b9bf16116f464d 397 Gene3D G3DSA:1.20.1330.10 258 372 9.9E-15 T 13-10-2018 P40_16095 4629d1d9c7c4886080b9bf16116f464d 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 396 6.9E-98 T 13-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 P40_08570 eaca796c293edba70c112bed38f25a19 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 61 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site P40_08570 eaca796c293edba70c112bed38f25a19 202 Gene3D G3DSA:1.10.357.10 3 194 1.3E-63 T 13-10-2018 P40_08570 eaca796c293edba70c112bed38f25a19 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 5.0E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_08570 eaca796c293edba70c112bed38f25a19 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 5.0E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_08570 eaca796c293edba70c112bed38f25a19 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 3.3E-17 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_08570 eaca796c293edba70c112bed38f25a19 202 SUPERFAMILY SSF48498 86 192 1.19E-14 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_08570 eaca796c293edba70c112bed38f25a19 202 SUPERFAMILY SSF46689 11 90 3.78E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_09310 0b233677f6546ad2f6a7c21dac16031d 355 SUPERFAMILY SSF46689 288 338 5.38E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_09310 0b233677f6546ad2f6a7c21dac16031d 355 Pfam PF12833 Helix-turn-helix domain 260 337 1.1E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_09310 0b233677f6546ad2f6a7c21dac16031d 355 Gene3D G3DSA:1.10.10.60 232 349 4.1E-23 T 13-10-2018 P40_09310 0b233677f6546ad2f6a7c21dac16031d 355 SMART SM00342 253 335 7.1E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_09310 0b233677f6546ad2f6a7c21dac16031d 355 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 209 4.4E-40 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 Gene3D G3DSA:2.60.40.1730 17 206 5.0E-72 T 13-10-2018 P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 SUPERFAMILY SSF55486 217 462 3.66E-72 T 13-10-2018 P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 Gene3D G3DSA:1.10.390.10 293 455 9.8E-64 T 13-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 557 873 3.3E-95 T 13-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 Gene3D G3DSA:2.60.40.1840 456 553 6.7E-27 T 13-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 Gene3D G3DSA:1.10.1740.60 207 291 2.5E-39 T 13-10-2018 P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 456 553 1.6E-24 T 13-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 Pfam PF01433 Peptidase family M1 domain 220 450 2.1E-53 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 SUPERFAMILY SSF63737 6 205 3.53E-43 T 13-10-2018 P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 306 321 1.3E-8 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 325 337 1.3E-8 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 270 280 1.3E-8 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 188 203 1.3E-8 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 Gene3D G3DSA:1.25.50.10 554 874 1.1E-92 T 13-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily P40_08610 3b350bd15c4f5d0253f795e38c15db4e 875 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 14 872 0.0 T 13-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 P40_12880 e6d50742a5cc376d6e8bdd5790f3c7a1 283 SUPERFAMILY SSF53474 12 265 5.03E-24 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_12880 e6d50742a5cc376d6e8bdd5790f3c7a1 283 Gene3D G3DSA:3.40.50.1820 2 270 9.3E-45 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_12880 e6d50742a5cc376d6e8bdd5790f3c7a1 283 Pfam PF12697 Alpha/beta hydrolase family 18 260 5.1E-12 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_16765 f1851439dc582c92ae91c02699c68931 84 SUPERFAMILY SSF82657 1 80 1.27E-22 T 13-10-2018 IPR036065 BolA-like superfamily P40_16765 f1851439dc582c92ae91c02699c68931 84 Gene3D G3DSA:3.30.300.90 1 83 5.4E-27 T 13-10-2018 P40_16765 f1851439dc582c92ae91c02699c68931 84 Pfam PF01722 BolA-like protein 21 74 4.0E-13 T 13-10-2018 IPR002634 BolA protein P40_16765 f1851439dc582c92ae91c02699c68931 84 PIRSF PIRSF003113 1 83 2.4E-19 T 13-10-2018 IPR002634 BolA protein P40_08420 1a22606f7a11ffa902a8c5e714127d02 70 Gene3D G3DSA:1.10.10.610 2 70 2.3E-26 T 13-10-2018 IPR036685 YehU-like superfamily P40_08420 1a22606f7a11ffa902a8c5e714127d02 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 5 67 2.0E-12 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 P40_08420 1a22606f7a11ffa902a8c5e714127d02 70 PIRSF PIRSF006169 3 70 8.2E-27 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 P40_08420 1a22606f7a11ffa902a8c5e714127d02 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 5 67 7.0E-28 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 P40_08420 1a22606f7a11ffa902a8c5e714127d02 70 SUPERFAMILY SSF118001 3 67 2.62E-24 T 13-10-2018 IPR036685 YehU-like superfamily P40_00135 2e1641d0ba4ccaa098e5c74727d5e6ed 132 Pfam PF07233 Protein of unknown function (DUF1425) 42 131 3.9E-28 T 13-10-2018 IPR010824 Protein of unknown function DUF1425 P40_00135 2e1641d0ba4ccaa098e5c74727d5e6ed 132 Gene3D G3DSA:2.60.40.3230 24 132 4.4E-28 T 13-10-2018 IPR038483 YcfL-like superfamily P40_05695 076aea27cff0786507d4c18b1eef96b0 380 SUPERFAMILY SSF102114 106 322 6.93E-15 T 13-10-2018 P40_05695 076aea27cff0786507d4c18b1eef96b0 380 PIRSF PIRSF006004 4 367 4.3E-149 T 13-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 P40_05695 076aea27cff0786507d4c18b1eef96b0 380 Gene3D G3DSA:3.20.20.70 68 339 1.2E-109 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_05695 076aea27cff0786507d4c18b1eef96b0 380 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 359 3.9E-142 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 P40_05695 076aea27cff0786507d4c18b1eef96b0 380 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 6 354 74.989 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 P40_05695 076aea27cff0786507d4c18b1eef96b0 380 Pfam PF04055 Radical SAM superfamily 110 284 7.9E-16 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P40_05695 076aea27cff0786507d4c18b1eef96b0 380 Gene3D G3DSA:1.10.150.530 1 67 1.1E-26 T 13-10-2018 P40_14200 3c35c51336bf426cfbe7542f39b2daeb 566 SUPERFAMILY SSF52540 347 559 1.21E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_14200 3c35c51336bf426cfbe7542f39b2daeb 566 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 32 551 1.9E-148 T 13-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 P40_14200 3c35c51336bf426cfbe7542f39b2daeb 566 Pfam PF00005 ABC transporter 368 511 4.6E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_14200 3c35c51336bf426cfbe7542f39b2daeb 566 SUPERFAMILY SSF90123 37 332 4.58E-31 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 P40_14200 3c35c51336bf426cfbe7542f39b2daeb 566 Gene3D G3DSA:3.40.50.300 344 564 6.4E-57 T 13-10-2018 P40_14200 3c35c51336bf426cfbe7542f39b2daeb 566 Gene3D G3DSA:1.20.1560.10 23 335 1.1E-28 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 P40_14200 3c35c51336bf426cfbe7542f39b2daeb 566 Pfam PF00664 ABC transporter transmembrane region 82 274 1.8E-17 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 P40_14200 3c35c51336bf426cfbe7542f39b2daeb 566 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 381 394 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 P40_14200 3c35c51336bf426cfbe7542f39b2daeb 566 SMART SM00382 377 557 4.8E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_21545 1cdcaab445428dc9774c4ad0c0524dbc 286 Gene3D G3DSA:3.40.1380.10 61 205 9.0E-109 T 13-10-2018 P40_21545 1cdcaab445428dc9774c4ad0c0524dbc 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.584 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21545 1cdcaab445428dc9774c4ad0c0524dbc 286 Gene3D G3DSA:1.10.287.80 6 282 9.0E-109 T 13-10-2018 P40_21545 1cdcaab445428dc9774c4ad0c0524dbc 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 13-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21545 1cdcaab445428dc9774c4ad0c0524dbc 286 Pfam PF00231 ATP synthase 5 285 2.2E-96 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21545 1cdcaab445428dc9774c4ad0c0524dbc 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 2.3E-37 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21545 1cdcaab445428dc9774c4ad0c0524dbc 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.3E-37 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21545 1cdcaab445428dc9774c4ad0c0524dbc 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 2.3E-37 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21545 1cdcaab445428dc9774c4ad0c0524dbc 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 2.3E-37 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21545 1cdcaab445428dc9774c4ad0c0524dbc 286 SUPERFAMILY SSF52943 2 286 1.7E-94 T 13-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21545 1cdcaab445428dc9774c4ad0c0524dbc 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 1.4E-108 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_08710 a40572bdd2e7dbbf2d0cd3e8a98a2e5a 244 Gene3D G3DSA:3.40.50.1580 1 241 4.0E-67 T 13-10-2018 P40_08710 a40572bdd2e7dbbf2d0cd3e8a98a2e5a 244 Pfam PF01048 Phosphorylase superfamily 2 237 1.6E-39 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 P40_08710 a40572bdd2e7dbbf2d0cd3e8a98a2e5a 244 SUPERFAMILY SSF53167 1 243 5.7E-71 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 P40_08710 a40572bdd2e7dbbf2d0cd3e8a98a2e5a 244 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 48 88 - T 13-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 P40_00650 a671a92d319ce2020a0ccb509a8de564 168 PRINTS PR01576 Peptide deformylase signature 102 120 2.1E-39 T 13-10-2018 IPR023635 Peptide deformylase P40_00650 a671a92d319ce2020a0ccb509a8de564 168 PRINTS PR01576 Peptide deformylase signature 121 150 2.1E-39 T 13-10-2018 IPR023635 Peptide deformylase P40_00650 a671a92d319ce2020a0ccb509a8de564 168 PRINTS PR01576 Peptide deformylase signature 33 62 2.1E-39 T 13-10-2018 IPR023635 Peptide deformylase P40_00650 a671a92d319ce2020a0ccb509a8de564 168 PRINTS PR01576 Peptide deformylase signature 90 101 2.1E-39 T 13-10-2018 IPR023635 Peptide deformylase P40_00650 a671a92d319ce2020a0ccb509a8de564 168 Gene3D G3DSA:3.90.45.10 1 168 4.7E-69 T 13-10-2018 IPR036821 Peptide deformylase superfamily P40_00650 a671a92d319ce2020a0ccb509a8de564 168 PIRSF PIRSF004749 1 168 2.5E-61 T 13-10-2018 IPR023635 Peptide deformylase P40_00650 a671a92d319ce2020a0ccb509a8de564 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 1.3E-60 T 13-10-2018 IPR023635 Peptide deformylase P40_00650 a671a92d319ce2020a0ccb509a8de564 168 Hamap MF_00163 Peptide deformylase [def]. 2 163 33.087 T 13-10-2018 IPR023635 Peptide deformylase P40_00650 a671a92d319ce2020a0ccb509a8de564 168 SUPERFAMILY SSF56420 3 165 1.19E-65 T 13-10-2018 IPR036821 Peptide deformylase superfamily P40_00650 a671a92d319ce2020a0ccb509a8de564 168 Pfam PF01327 Polypeptide deformylase 5 153 1.4E-54 T 13-10-2018 IPR023635 Peptide deformylase P40_16330 ed1e27e46af82a5b96160dd45dd972ce 283 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 26 112 1.2E-28 T 13-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 P40_16330 ed1e27e46af82a5b96160dd45dd972ce 283 SUPERFAMILY SSF51690 116 278 4.71E-49 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 P40_16330 ed1e27e46af82a5b96160dd45dd972ce 283 SUPERFAMILY SSF54675 6 112 5.49E-31 T 13-10-2018 P40_16330 ed1e27e46af82a5b96160dd45dd972ce 283 PIRSF PIRSF006250 8 282 1.3E-85 T 13-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 P40_16330 ed1e27e46af82a5b96160dd45dd972ce 283 Gene3D G3DSA:3.20.20.70 124 269 2.1E-100 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_16330 ed1e27e46af82a5b96160dd45dd972ce 283 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 116 278 1.8E-49 T 13-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 P40_16330 ed1e27e46af82a5b96160dd45dd972ce 283 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 19 278 1.7E-85 T 13-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 P40_16330 ed1e27e46af82a5b96160dd45dd972ce 283 Gene3D G3DSA:3.90.1170.20 12 278 2.1E-100 T 13-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 P40_01275 fa066baf601de7edd2dbfd2a0f82d91e 668 SUPERFAMILY SSF52922 539 668 2.09E-40 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 P40_01275 fa066baf601de7edd2dbfd2a0f82d91e 668 SMART SM00861 358 529 2.9E-66 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain P40_01275 fa066baf601de7edd2dbfd2a0f82d91e 668 ProSitePatterns PS00802 Transketolase signature 2. 471 487 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 P40_01275 fa066baf601de7edd2dbfd2a0f82d91e 668 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 P40_01275 fa066baf601de7edd2dbfd2a0f82d91e 668 Gene3D G3DSA:3.40.50.920 542 668 1.9E-39 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 P40_01275 fa066baf601de7edd2dbfd2a0f82d91e 668 Pfam PF02780 Transketolase, C-terminal domain 554 660 1.8E-18 T 13-10-2018 IPR033248 Transketolase, C-terminal domain P40_01275 fa066baf601de7edd2dbfd2a0f82d91e 668 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 667 7.8E-293 T 13-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 P40_01275 fa066baf601de7edd2dbfd2a0f82d91e 668 Gene3D G3DSA:3.40.50.970 6 329 1.4E-130 T 13-10-2018 P40_01275 fa066baf601de7edd2dbfd2a0f82d91e 668 SUPERFAMILY SSF52518 8 333 4.29E-119 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold P40_01275 fa066baf601de7edd2dbfd2a0f82d91e 668 SUPERFAMILY SSF52518 350 529 1.47E-67 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold P40_01275 fa066baf601de7edd2dbfd2a0f82d91e 668 Gene3D G3DSA:3.40.50.970 330 541 4.1E-81 T 13-10-2018 P40_01275 fa066baf601de7edd2dbfd2a0f82d91e 668 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 337 7.5E-161 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 P40_01275 fa066baf601de7edd2dbfd2a0f82d91e 668 Pfam PF02779 Transketolase, pyrimidine binding domain 357 527 4.0E-44 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain P40_03310 a6008d11922caaa6392061a1e33fda90 662 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 41 96 2.9E-10 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 P40_03310 a6008d11922caaa6392061a1e33fda90 662 Gene3D G3DSA:3.30.300.30 531 659 2.2E-12 T 13-10-2018 P40_03310 a6008d11922caaa6392061a1e33fda90 662 Gene3D G3DSA:3.40.50.12780 79 527 2.9E-53 T 13-10-2018 P40_03310 a6008d11922caaa6392061a1e33fda90 662 ProSitePatterns PS00455 Putative AMP-binding domain signature. 275 286 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_03310 a6008d11922caaa6392061a1e33fda90 662 Pfam PF13193 AMP-binding enzyme C-terminal domain 552 619 4.9E-6 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_03310 a6008d11922caaa6392061a1e33fda90 662 SUPERFAMILY SSF56801 25 648 4.71E-119 T 13-10-2018 P40_03310 a6008d11922caaa6392061a1e33fda90 662 Pfam PF00501 AMP-binding enzyme 104 531 5.2E-43 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_03310 a6008d11922caaa6392061a1e33fda90 662 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 9 652 5.9E-233 T 13-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 Pfam PF05190 MutS family domain IV 426 515 2.3E-26 T 13-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 Pfam PF05192 MutS domain III 270 557 6.7E-41 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 SUPERFAMILY SSF52540 565 795 1.37E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 686 702 - T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 Gene3D G3DSA:3.40.1170.10 1 123 6.4E-51 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 Gene3D G3DSA:3.30.420.110 129 262 1.4E-33 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 PIRSF PIRSF037677 201 811 2.8E-126 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 PIRSF PIRSF037677 2 192 7.3E-27 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 Gene3D G3DSA:1.10.1420.10 385 501 6.0E-101 T 13-10-2018 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 Gene3D G3DSA:3.40.50.300 566 824 3.0E-101 T 13-10-2018 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 Pfam PF01624 MutS domain I 10 121 3.9E-41 T 13-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 SUPERFAMILY SSF55271 4 115 2.75E-42 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 9 846 0.0 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 SUPERFAMILY SSF48334 268 563 6.28E-87 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 Pfam PF05188 MutS domain II 130 253 1.9E-23 T 13-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 SUPERFAMILY SSF53150 120 281 2.22E-37 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 Gene3D G3DSA:1.10.1420.10 267 557 6.0E-101 T 13-10-2018 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 Pfam PF00488 MutS domain V 608 795 2.7E-84 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 SMART SM00534 605 792 1.4E-115 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 9 841 25.125 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 P40_14495 095f764cf018e7eaca57fa7d636d7d1b 849 SMART SM00533 284 589 4.5E-99 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 P40_04275 0f4d335aacc9964c0cdb48595164409a 112 Pfam PF01230 HIT domain 12 105 3.4E-28 T 13-10-2018 IPR001310 Histidine triad (HIT) protein P40_04275 0f4d335aacc9964c0cdb48595164409a 112 ProSitePatterns PS00892 HIT domain signature. 85 103 - T 13-10-2018 IPR019808 Histidine triad, conserved site P40_04275 0f4d335aacc9964c0cdb48595164409a 112 PRINTS PR00332 Histidine triad family signature 5 21 1.2E-20 T 13-10-2018 IPR001310 Histidine triad (HIT) protein P40_04275 0f4d335aacc9964c0cdb48595164409a 112 PRINTS PR00332 Histidine triad family signature 92 102 1.2E-20 T 13-10-2018 IPR001310 Histidine triad (HIT) protein P40_04275 0f4d335aacc9964c0cdb48595164409a 112 PRINTS PR00332 Histidine triad family signature 26 44 1.2E-20 T 13-10-2018 IPR001310 Histidine triad (HIT) protein P40_04275 0f4d335aacc9964c0cdb48595164409a 112 SUPERFAMILY SSF54197 1 111 7.66E-36 T 13-10-2018 IPR036265 HIT-like superfamily P40_04275 0f4d335aacc9964c0cdb48595164409a 112 Gene3D G3DSA:3.30.428.10 1 112 2.4E-41 T 13-10-2018 IPR036265 HIT-like superfamily P40_18960 ef6708f897276de3ac2a8163fe9b471d 267 Gene3D G3DSA:1.10.3720.10 53 259 7.9E-22 T 13-10-2018 IPR035906 MetI-like superfamily P40_18960 ef6708f897276de3ac2a8163fe9b471d 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 252 2.1E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_18960 ef6708f897276de3ac2a8163fe9b471d 267 SUPERFAMILY SSF161098 57 243 6.67E-25 T 13-10-2018 IPR035906 MetI-like superfamily P40_03635 6c49b6808cbf8d64184a785267265bd2 99 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 64 8.7E-30 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 P40_03635 6c49b6808cbf8d64184a785267265bd2 99 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 64 27.587 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 P40_03635 6c49b6808cbf8d64184a785267265bd2 99 Pfam PF17209 Hfq protein 7 68 1.5E-31 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 P40_03635 6c49b6808cbf8d64184a785267265bd2 99 Gene3D G3DSA:2.30.30.100 1 81 3.3E-32 T 13-10-2018 P40_03635 6c49b6808cbf8d64184a785267265bd2 99 SUPERFAMILY SSF50182 7 67 6.74E-24 T 13-10-2018 IPR010920 LSM domain superfamily P40_13540 bebc941d8242d0f4b425299c62da845a 211 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 196 5.0E-37 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_13540 bebc941d8242d0f4b425299c62da845a 211 PIRSF PIRSF000349 1 207 2.1E-75 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_13540 bebc941d8242d0f4b425299c62da845a 211 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 1.8E-26 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_13540 bebc941d8242d0f4b425299c62da845a 211 SUPERFAMILY SSF46609 1 86 1.06E-28 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_13540 bebc941d8242d0f4b425299c62da845a 211 SUPERFAMILY SSF54719 87 202 1.96E-40 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_13540 bebc941d8242d0f4b425299c62da845a 211 Gene3D G3DSA:2.40.500.20 86 204 2.6E-43 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_13540 bebc941d8242d0f4b425299c62da845a 211 Gene3D G3DSA:1.10.287.990 20 85 1.6E-23 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_13540 bebc941d8242d0f4b425299c62da845a 211 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 9.6E-23 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_13540 bebc941d8242d0f4b425299c62da845a 211 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 9.6E-23 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_13540 bebc941d8242d0f4b425299c62da845a 211 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 9.6E-23 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_13540 bebc941d8242d0f4b425299c62da845a 211 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 9.6E-23 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_13540 bebc941d8242d0f4b425299c62da845a 211 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 9.6E-23 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_13540 bebc941d8242d0f4b425299c62da845a 211 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 13-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 SMART SM00382 56 227 3.0E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 3 322 9.5E-170 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 PRINTS PR00142 RecA protein signature 164 193 6.5E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 PRINTS PR00142 RecA protein signature 209 237 6.5E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 PRINTS PR00142 RecA protein signature 92 121 6.5E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 PRINTS PR00142 RecA protein signature 296 313 6.5E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 PRINTS PR00142 RecA protein signature 126 155 6.5E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 PRINTS PR00142 RecA protein signature 242 271 6.5E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 SUPERFAMILY SSF52540 3 266 1.72E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 Hamap MF_00268 Protein RecA [recA]. 4 328 50.81 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 Gene3D G3DSA:3.40.50.300 25 266 3.8E-82 T 13-10-2018 P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 Pfam PF00154 recA bacterial DNA recombination protein 6 267 1.2E-143 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 Gene3D G3DSA:3.30.250.10 267 343 1.2E-24 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 ProSitePatterns PS00321 recA signature. 212 220 - T 13-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 P40_14385 e89ffaff2449865d72bcf349af0df5a4 345 SUPERFAMILY SSF54752 268 323 5.89E-20 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 SUPERFAMILY SSF51735 230 468 3.71E-61 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 432 452 1.8E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 235 252 1.8E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 352 368 1.8E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 305 316 1.8E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 399 416 1.8E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 378 397 1.8E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 234 414 1.4E-4 T 13-10-2018 P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 242 466 5.5E-50 T 13-10-2018 P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 365 393 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 Gene3D G3DSA:3.40.50.720 24 227 1.5E-50 T 13-10-2018 P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 358 366 1.1E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 378 397 1.1E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 305 316 1.1E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06785 0d93137e6d153ef265e3b7eb29046fca 472 Gene3D G3DSA:3.40.50.720 229 472 3.8E-68 T 13-10-2018 P40_17950 555470ef22fd7f340fd46d13b8f1863d 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 1.8E-43 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_17950 555470ef22fd7f340fd46d13b8f1863d 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.8E-43 T 13-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_17950 555470ef22fd7f340fd46d13b8f1863d 103 SUPERFAMILY SSF141091 1 101 4.97E-41 T 13-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_17950 555470ef22fd7f340fd46d13b8f1863d 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 13-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_17950 555470ef22fd7f340fd46d13b8f1863d 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 28.538 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_13050 d225b0f270acc7d1b31a145d9bdd2b1f 313 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 310 7.5E-98 T 13-10-2018 IPR007296 Domain of unknown function DUF403 P40_08480 3d322716f4d317acab934bda0bb50612 315 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 312 6.7E-135 T 13-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 P40_08480 3d322716f4d317acab934bda0bb50612 315 SUPERFAMILY SSF53335 82 313 2.89E-32 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_08480 3d322716f4d317acab934bda0bb50612 315 Gene3D G3DSA:3.40.50.150 88 290 3.3E-25 T 13-10-2018 P40_08480 3d322716f4d317acab934bda0bb50612 315 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 5 313 51.691 T 13-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 P40_08480 3d322716f4d317acab934bda0bb50612 315 Pfam PF08003 Protein of unknown function (DUF1698) 22 312 2.6E-123 T 13-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like P40_17115 2f214fc825e3536ec9db77c5eb218faa 763 Gene3D G3DSA:3.30.365.10 52 189 7.7E-22 T 13-10-2018 P40_17115 2f214fc825e3536ec9db77c5eb218faa 763 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 628 708 7.5E-19 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 P40_17115 2f214fc825e3536ec9db77c5eb218faa 763 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 58 200 7.4E-14 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 P40_17115 2f214fc825e3536ec9db77c5eb218faa 763 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 334 612 1.4E-31 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 P40_17115 2f214fc825e3536ec9db77c5eb218faa 763 Gene3D G3DSA:3.30.365.10 620 762 2.0E-41 T 13-10-2018 P40_17115 2f214fc825e3536ec9db77c5eb218faa 763 Gene3D G3DSA:3.90.1170.50 190 307 1.7E-11 T 13-10-2018 P40_17115 2f214fc825e3536ec9db77c5eb218faa 763 Gene3D G3DSA:3.30.365.10 361 454 4.6E-47 T 13-10-2018 P40_17115 2f214fc825e3536ec9db77c5eb218faa 763 Gene3D G3DSA:3.30.365.10 335 562 4.6E-47 T 13-10-2018 P40_17115 2f214fc825e3536ec9db77c5eb218faa 763 SMART SM01008 218 307 6.7E-28 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead P40_17115 2f214fc825e3536ec9db77c5eb218faa 763 SUPERFAMILY SSF56003 53 251 7.67E-40 T 13-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 P40_17115 2f214fc825e3536ec9db77c5eb218faa 763 SUPERFAMILY SSF56003 330 759 5.82E-110 T 13-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 P40_17115 2f214fc825e3536ec9db77c5eb218faa 763 PIRSF PIRSF036389 1 763 5.4E-242 T 13-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related P40_06285 8cf55756ee9be0e99b67d7c23a0d1ede 165 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 7 124 1.4E-45 T 13-10-2018 IPR028973 PhnB-like P40_06285 8cf55756ee9be0e99b67d7c23a0d1ede 165 Gene3D G3DSA:3.10.180.70 3 165 7.2E-60 T 13-10-2018 P40_06285 8cf55756ee9be0e99b67d7c23a0d1ede 165 SUPERFAMILY SSF54593 6 163 5.63E-46 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_06285 8cf55756ee9be0e99b67d7c23a0d1ede 165 PIRSF PIRSF021700 3 165 4.5E-56 T 13-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase P40_08630 2873857a168fddf8dfc6068031c4aeeb 68 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 28.012 T 13-10-2018 IPR007040 Ribosome modulation factor P40_08630 2873857a168fddf8dfc6068031c4aeeb 68 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 52 2.0E-12 T 13-10-2018 IPR007040 Ribosome modulation factor P40_08630 2873857a168fddf8dfc6068031c4aeeb 68 Gene3D G3DSA:1.10.10.620 1 65 8.8E-28 T 13-10-2018 IPR023200 Ribosome modulation factor domain superfamily P40_08630 2873857a168fddf8dfc6068031c4aeeb 68 Pfam PF04957 Ribosome modulation factor 1 54 1.6E-27 T 13-10-2018 IPR007040 Ribosome modulation factor P40_02760 10f8ffd44778e0c981f405350ef64c52 447 Gene3D G3DSA:1.20.1250.20 230 434 2.7E-30 T 13-10-2018 P40_02760 10f8ffd44778e0c981f405350ef64c52 447 Gene3D G3DSA:1.20.1250.20 13 206 5.5E-40 T 13-10-2018 P40_02760 10f8ffd44778e0c981f405350ef64c52 447 Pfam PF07690 Major Facilitator Superfamily 26 356 6.5E-23 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_02760 10f8ffd44778e0c981f405350ef64c52 447 SUPERFAMILY SSF103473 14 427 5.49E-56 T 13-10-2018 IPR036259 MFS transporter superfamily P40_17155 c8e185d2df9291fd094c8bc874e08256 292 Pfam PF03466 LysR substrate binding domain 90 288 6.3E-28 T 13-10-2018 IPR005119 LysR, substrate-binding P40_17155 c8e185d2df9291fd094c8bc874e08256 292 Gene3D G3DSA:3.40.190.290 94 276 1.0E-33 T 13-10-2018 P40_17155 c8e185d2df9291fd094c8bc874e08256 292 SUPERFAMILY SSF46785 4 88 2.18E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_17155 c8e185d2df9291fd094c8bc874e08256 292 Gene3D G3DSA:1.10.10.10 1 82 4.3E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_17155 c8e185d2df9291fd094c8bc874e08256 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.8E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_17155 c8e185d2df9291fd094c8bc874e08256 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.8E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_17155 c8e185d2df9291fd094c8bc874e08256 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.8E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_17155 c8e185d2df9291fd094c8bc874e08256 292 SUPERFAMILY SSF53850 87 289 2.02E-31 T 13-10-2018 P40_17155 c8e185d2df9291fd094c8bc874e08256 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.2E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 Gene3D G3DSA:3.40.1010.10 217 334 9.5E-45 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 Pfam PF13241 Putative NAD(P)-binding 8 115 5.1E-25 T 13-10-2018 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 Hamap MF_01646 Siroheme synthase [cysG]. 1 463 49.16 T 13-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 4.0E-6 T 13-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 7.6E-18 T 13-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 219 454 7.5E-92 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 PIRSF PIRSF036426 1 468 1.9E-185 T 13-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 Gene3D G3DSA:3.30.950.10 335 468 1.9E-48 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 2.8E-64 T 13-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 SUPERFAMILY SSF75615 114 208 5.75E-25 T 13-10-2018 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 221 430 5.5E-52 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 Gene3D G3DSA:3.30.160.110 113 148 9.2E-15 T 13-10-2018 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 Gene3D G3DSA:3.40.50.720 1 112 7.3E-30 T 13-10-2018 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 SUPERFAMILY SSF51735 1 112 6.56E-21 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 299 332 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 P40_09500 96bdb5f4c9a5ac05ca32559dcd3b6fda 470 SUPERFAMILY SSF53790 217 463 6.54E-81 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 P40_04530 f1411f894fb71cebf9b4f5d68d7c7d7f 709 Gene3D G3DSA:2.40.170.20 184 709 5.6E-50 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_04530 f1411f894fb71cebf9b4f5d68d7c7d7f 709 Gene3D G3DSA:2.170.130.10 34 160 1.2E-13 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_04530 f1411f894fb71cebf9b4f5d68d7c7d7f 709 SUPERFAMILY SSF56935 16 709 2.88E-75 T 13-10-2018 P40_04530 f1411f894fb71cebf9b4f5d68d7c7d7f 709 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 156 2.7E-11 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_04530 f1411f894fb71cebf9b4f5d68d7c7d7f 709 Pfam PF00593 TonB dependent receptor 208 708 2.7E-30 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_18470 b6602bb36713d7f64f908aa7e8bd7f1e 774 Pfam PF00905 Penicillin binding protein transpeptidase domain 428 673 1.7E-22 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 P40_18470 b6602bb36713d7f64f908aa7e8bd7f1e 774 Gene3D G3DSA:1.10.3810.10 157 360 1.4E-236 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_18470 b6602bb36713d7f64f908aa7e8bd7f1e 774 Gene3D G3DSA:3.40.710.10 62 717 1.4E-236 T 13-10-2018 P40_18470 b6602bb36713d7f64f908aa7e8bd7f1e 774 Pfam PF14814 Bifunctional transglycosylase second domain 72 148 7.6E-21 T 13-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_18470 b6602bb36713d7f64f908aa7e8bd7f1e 774 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 27 746 9.0E-249 T 13-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_18470 b6602bb36713d7f64f908aa7e8bd7f1e 774 SUPERFAMILY SSF53955 165 360 1.57E-65 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily P40_18470 b6602bb36713d7f64f908aa7e8bd7f1e 774 Pfam PF00912 Transglycosylase 165 334 9.2E-57 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_18470 b6602bb36713d7f64f908aa7e8bd7f1e 774 Gene3D G3DSA:3.30.2060.10 70 156 1.4E-236 T 13-10-2018 P40_18470 b6602bb36713d7f64f908aa7e8bd7f1e 774 PIRSF PIRSF002799 1 774 1.1E-279 T 13-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_18470 b6602bb36713d7f64f908aa7e8bd7f1e 774 SUPERFAMILY SSF56601 318 753 1.32E-110 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like P40_00330 e6ca0be396034d9cede5473fb3985ba6 291 Pfam PF01739 CheR methyltransferase, SAM binding domain 91 274 2.3E-51 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal P40_00330 e6ca0be396034d9cede5473fb3985ba6 291 SMART SM00138 19 288 3.7E-78 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_00330 e6ca0be396034d9cede5473fb3985ba6 291 Gene3D G3DSA:1.10.155.10 10 88 2.6E-11 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily P40_00330 e6ca0be396034d9cede5473fb3985ba6 291 SUPERFAMILY SSF53335 91 278 2.44E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_00330 e6ca0be396034d9cede5473fb3985ba6 291 Gene3D G3DSA:3.40.50.150 89 288 3.8E-49 T 13-10-2018 P40_00330 e6ca0be396034d9cede5473fb3985ba6 291 Pfam PF03705 CheR methyltransferase, all-alpha domain 21 70 8.6E-11 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal P40_00330 e6ca0be396034d9cede5473fb3985ba6 291 PRINTS PR00996 Glutamate methyltransferase family signature 41 54 1.4E-32 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_00330 e6ca0be396034d9cede5473fb3985ba6 291 PRINTS PR00996 Glutamate methyltransferase family signature 246 269 1.4E-32 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_00330 e6ca0be396034d9cede5473fb3985ba6 291 PRINTS PR00996 Glutamate methyltransferase family signature 227 241 1.4E-32 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_00330 e6ca0be396034d9cede5473fb3985ba6 291 PRINTS PR00996 Glutamate methyltransferase family signature 83 95 1.4E-32 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_00330 e6ca0be396034d9cede5473fb3985ba6 291 PRINTS PR00996 Glutamate methyltransferase family signature 158 174 1.4E-32 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_00330 e6ca0be396034d9cede5473fb3985ba6 291 PRINTS PR00996 Glutamate methyltransferase family signature 122 142 1.4E-32 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_00330 e6ca0be396034d9cede5473fb3985ba6 291 SUPERFAMILY SSF47757 8 89 3.4E-14 T 13-10-2018 P40_07605 f5201894a74c53957b6d8769ad1a60f6 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.4E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07605 f5201894a74c53957b6d8769ad1a60f6 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.4E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07605 f5201894a74c53957b6d8769ad1a60f6 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 2.4E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07605 f5201894a74c53957b6d8769ad1a60f6 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.4E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07605 f5201894a74c53957b6d8769ad1a60f6 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.4E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07605 f5201894a74c53957b6d8769ad1a60f6 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.4E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07605 f5201894a74c53957b6d8769ad1a60f6 306 SUPERFAMILY SSF51735 1 243 1.27E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_07605 f5201894a74c53957b6d8769ad1a60f6 306 Gene3D G3DSA:3.40.50.720 8 300 2.2E-81 T 13-10-2018 P40_07605 f5201894a74c53957b6d8769ad1a60f6 306 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_07605 f5201894a74c53957b6d8769ad1a60f6 306 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 1.0E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07605 f5201894a74c53957b6d8769ad1a60f6 306 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.0E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07605 f5201894a74c53957b6d8769ad1a60f6 306 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.0E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07605 f5201894a74c53957b6d8769ad1a60f6 306 Pfam PF00106 short chain dehydrogenase 9 205 6.8E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07605 f5201894a74c53957b6d8769ad1a60f6 306 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 204 5.3E-6 T 13-10-2018 P40_16510 510dc92253a946d6871526b80a883975 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 6 118 5.3E-31 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 P40_16510 510dc92253a946d6871526b80a883975 122 SUPERFAMILY SSF52980 5 108 2.9E-23 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 P40_16510 510dc92253a946d6871526b80a883975 122 Pfam PF02021 Uncharacterised protein family UPF0102 10 99 2.4E-26 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 P40_16510 510dc92253a946d6871526b80a883975 122 Gene3D G3DSA:3.40.1350.10 9 122 2.5E-32 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 P40_16510 510dc92253a946d6871526b80a883975 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 3 114 21.383 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 P40_20090 3abc9b5adf6f22a72d056d83cdc10076 391 SUPERFAMILY SSF103473 8 383 3.14E-38 T 13-10-2018 IPR036259 MFS transporter superfamily P40_20090 3abc9b5adf6f22a72d056d83cdc10076 391 Gene3D G3DSA:1.20.1250.20 195 388 4.8E-8 T 13-10-2018 P40_20090 3abc9b5adf6f22a72d056d83cdc10076 391 Gene3D G3DSA:1.20.1250.20 8 194 1.3E-18 T 13-10-2018 P40_20090 3abc9b5adf6f22a72d056d83cdc10076 391 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 20 375 2.7E-67 T 13-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB P40_02620 6895fb41f388270748e8e04fdb2c53bc 222 Gene3D G3DSA:1.10.10.60 20 69 1.1E-13 T 13-10-2018 P40_02620 6895fb41f388270748e8e04fdb2c53bc 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 73 3.8E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_02620 6895fb41f388270748e8e04fdb2c53bc 222 Gene3D G3DSA:1.10.357.10 70 212 3.2E-7 T 13-10-2018 P40_02620 6895fb41f388270748e8e04fdb2c53bc 222 SUPERFAMILY SSF46689 21 91 2.46E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_02620 6895fb41f388270748e8e04fdb2c53bc 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 1.1E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_02620 6895fb41f388270748e8e04fdb2c53bc 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 1.1E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_07770 722698caee414a58990f747b299ed0af 399 Gene3D G3DSA:1.10.287.470 96 169 1.3E-115 T 13-10-2018 P40_07770 722698caee414a58990f747b299ed0af 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 291 2.5E-13 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain P40_07770 722698caee414a58990f747b299ed0af 399 Pfam PF00529 HlyD membrane-fusion protein of T1SS 45 358 1.0E-9 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 P40_07770 722698caee414a58990f747b299ed0af 399 Gene3D G3DSA:2.40.420.20 302 371 1.3E-115 T 13-10-2018 P40_07770 722698caee414a58990f747b299ed0af 399 Gene3D G3DSA:2.40.30.170 49 301 1.3E-115 T 13-10-2018 P40_07770 722698caee414a58990f747b299ed0af 399 SUPERFAMILY SSF111369 49 298 7.32E-87 T 13-10-2018 P40_07770 722698caee414a58990f747b299ed0af 399 Gene3D G3DSA:2.40.50.100 61 205 1.3E-115 T 13-10-2018 P40_07770 722698caee414a58990f747b299ed0af 399 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 372 3.4E-87 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 P40_19290 d0cbaf58aae1b9d1e449674e203df71b 357 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 8 351 50.264 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 P40_19290 d0cbaf58aae1b9d1e449674e203df71b 357 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 24 33 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 P40_19290 d0cbaf58aae1b9d1e449674e203df71b 357 SUPERFAMILY SSF51726 5 352 2.62E-126 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 P40_19290 d0cbaf58aae1b9d1e449674e203df71b 357 Gene3D G3DSA:3.20.20.210 1 355 3.0E-161 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 P40_19290 d0cbaf58aae1b9d1e449674e203df71b 357 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 7 349 1.2E-143 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 P40_19290 d0cbaf58aae1b9d1e449674e203df71b 357 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 11 347 2.1E-135 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 P40_19290 d0cbaf58aae1b9d1e449674e203df71b 357 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 144 160 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 P40_09435 35fd70f11a626d08da6509bd4b280fc3 108 Gene3D G3DSA:3.30.1390.10 6 108 2.7E-45 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like P40_09435 35fd70f11a626d08da6509bd4b280fc3 108 SUPERFAMILY SSF54736 23 107 5.23E-34 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like P40_09435 35fd70f11a626d08da6509bd4b280fc3 108 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 25 104 4.8E-36 T 13-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 P40_09435 35fd70f11a626d08da6509bd4b280fc3 108 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 7 103 29.573 T 13-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS P40_21455 58830508075712ebfed18f55f22ea7e6 214 Gene3D G3DSA:1.20.1050.10 86 198 8.3E-60 T 13-10-2018 P40_21455 58830508075712ebfed18f55f22ea7e6 214 SUPERFAMILY SSF52833 2 86 1.92E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_21455 58830508075712ebfed18f55f22ea7e6 214 Pfam PF13409 Glutathione S-transferase, N-terminal domain 12 77 3.5E-8 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_21455 58830508075712ebfed18f55f22ea7e6 214 SUPERFAMILY SSF47616 82 208 1.07E-17 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_21455 58830508075712ebfed18f55f22ea7e6 214 Gene3D G3DSA:3.40.30.10 5 206 8.3E-60 T 13-10-2018 P40_19265 f329a7af5c5f9e63ed7448cd5c94c439 232 Gene3D G3DSA:3.40.50.2020 125 231 4.3E-15 T 13-10-2018 P40_19265 f329a7af5c5f9e63ed7448cd5c94c439 232 SUPERFAMILY SSF53271 56 228 1.7E-29 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like P40_18310 44b2f036d58eb2dc1a8ad9e566c343d9 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 1.9E-66 T 13-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18310 44b2f036d58eb2dc1a8ad9e566c343d9 142 Gene3D G3DSA:3.30.1550.10 2 72 3.2E-35 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily P40_18310 44b2f036d58eb2dc1a8ad9e566c343d9 142 SUPERFAMILY SSF54747 3 73 1.22E-30 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily P40_18310 44b2f036d58eb2dc1a8ad9e566c343d9 142 SMART SM00649 9 141 2.7E-85 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 P40_18310 44b2f036d58eb2dc1a8ad9e566c343d9 142 SUPERFAMILY SSF46906 68 141 1.96E-26 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily P40_18310 44b2f036d58eb2dc1a8ad9e566c343d9 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.539 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 P40_18310 44b2f036d58eb2dc1a8ad9e566c343d9 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 6.4E-25 T 13-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 P40_18310 44b2f036d58eb2dc1a8ad9e566c343d9 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 8.4E-30 T 13-10-2018 IPR020784 Ribosomal protein L11, N-terminal P40_18310 44b2f036d58eb2dc1a8ad9e566c343d9 142 Gene3D G3DSA:1.10.10.250 73 141 4.4E-28 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily P40_18310 44b2f036d58eb2dc1a8ad9e566c343d9 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 4.0E-14 T 13-10-2018 P40_18310 44b2f036d58eb2dc1a8ad9e566c343d9 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 13-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_08735 3060d7b678b65216d5e7b9800f3fe8ca 337 Gene3D G3DSA:3.40.50.970 3 327 4.1E-100 T 13-10-2018 P40_08735 3060d7b678b65216d5e7b9800f3fe8ca 337 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 7 326 1.3E-128 T 13-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 P40_08735 3060d7b678b65216d5e7b9800f3fe8ca 337 Pfam PF00676 Dehydrogenase E1 component 13 295 8.5E-75 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 P40_08735 3060d7b678b65216d5e7b9800f3fe8ca 337 SUPERFAMILY SSF52518 6 327 1.97E-91 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 Hamap MF_00318 Enolase [eno]. 2 415 43.601 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 PIRSF PIRSF001400 1 428 7.6E-189 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 13-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 SMART SM01192 143 428 1.4E-220 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 SUPERFAMILY SSF54826 3 137 2.98E-54 T 13-10-2018 P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 Pfam PF03952 Enolase, N-terminal domain 4 134 7.3E-56 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 SUPERFAMILY SSF51604 142 426 6.65E-127 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 Gene3D G3DSA:3.20.20.120 129 428 3.9E-132 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 Gene3D G3DSA:3.30.390.10 1 126 7.6E-53 T 13-10-2018 IPR029017 Enolase-like, N-terminal P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 427 2.9E-133 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 PRINTS PR00148 Enolase signature 37 51 9.5E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 PRINTS PR00148 Enolase signature 165 178 9.5E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 PRINTS PR00148 Enolase signature 107 123 9.5E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 PRINTS PR00148 Enolase signature 367 384 9.5E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 PRINTS PR00148 Enolase signature 315 326 9.5E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 PRINTS PR00148 Enolase signature 338 352 9.5E-44 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 SMART SM01193 4 134 1.5E-88 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P40_09255 73086736ad99d8903a0493b3f9f7e31a 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 1.0E-206 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P40_00175 8a1395f4aa21f01bb0a7200a89f647f7 164 Gene3D G3DSA:3.40.50.620 1 162 3.9E-56 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_00175 8a1395f4aa21f01bb0a7200a89f647f7 164 Pfam PF01467 Cytidylyltransferase-like 6 134 7.6E-24 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 P40_00175 8a1395f4aa21f01bb0a7200a89f647f7 164 SMART SM00764 13 154 0.0074 T 13-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 P40_00175 8a1395f4aa21f01bb0a7200a89f647f7 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 156 1.1E-58 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 P40_00175 8a1395f4aa21f01bb0a7200a89f647f7 164 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 69 5.0E-4 T 13-10-2018 P40_00175 8a1395f4aa21f01bb0a7200a89f647f7 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.205 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 P40_00175 8a1395f4aa21f01bb0a7200a89f647f7 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 63 1.4E-19 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 P40_00175 8a1395f4aa21f01bb0a7200a89f647f7 164 SUPERFAMILY SSF52374 2 151 7.24E-44 T 13-10-2018 P40_00175 8a1395f4aa21f01bb0a7200a89f647f7 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 6.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 P40_00175 8a1395f4aa21f01bb0a7200a89f647f7 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 6.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 P40_00175 8a1395f4aa21f01bb0a7200a89f647f7 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 6.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 P40_00175 8a1395f4aa21f01bb0a7200a89f647f7 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 6.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 P40_00175 8a1395f4aa21f01bb0a7200a89f647f7 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 6.3E-47 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 P40_07545 eb322ca71165af8e9f1f63ab1aaf14db 322 Gene3D G3DSA:3.40.50.1820 1 320 1.5E-95 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_07545 eb322ca71165af8e9f1f63ab1aaf14db 322 PRINTS PR00412 Epoxide hydrolase signature 113 126 1.5E-27 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_07545 eb322ca71165af8e9f1f63ab1aaf14db 322 PRINTS PR00412 Epoxide hydrolase signature 33 51 1.5E-27 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_07545 eb322ca71165af8e9f1f63ab1aaf14db 322 PRINTS PR00412 Epoxide hydrolase signature 294 316 1.5E-27 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_07545 eb322ca71165af8e9f1f63ab1aaf14db 322 PRINTS PR00412 Epoxide hydrolase signature 53 68 1.5E-27 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_07545 eb322ca71165af8e9f1f63ab1aaf14db 322 PRINTS PR00412 Epoxide hydrolase signature 99 112 1.5E-27 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_07545 eb322ca71165af8e9f1f63ab1aaf14db 322 Pfam PF00561 alpha/beta hydrolase fold 27 305 1.5E-28 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_07545 eb322ca71165af8e9f1f63ab1aaf14db 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 9.2E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_07545 eb322ca71165af8e9f1f63ab1aaf14db 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 9.2E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_07545 eb322ca71165af8e9f1f63ab1aaf14db 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 9.2E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_07545 eb322ca71165af8e9f1f63ab1aaf14db 322 SUPERFAMILY SSF53474 8 319 3.46E-73 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_20135 943d1a6a56e24295888d588766a25b0e 289 Gene3D G3DSA:3.40.50.1980 156 285 1.7E-29 T 13-10-2018 P40_20135 943d1a6a56e24295888d588766a25b0e 289 SUPERFAMILY SSF53807 15 282 2.04E-64 T 13-10-2018 P40_20135 943d1a6a56e24295888d588766a25b0e 289 Gene3D G3DSA:3.40.50.1980 32 154 5.4E-33 T 13-10-2018 P40_20135 943d1a6a56e24295888d588766a25b0e 289 Pfam PF01497 Periplasmic binding protein 38 262 5.9E-23 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 SUPERFAMILY SSF50249 1 105 1.75E-33 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 Pfam PF02938 GAD domain 309 408 4.6E-31 T 13-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 Gene3D G3DSA:3.30.930.10 119 580 7.6E-200 T 13-10-2018 P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 Pfam PF01336 OB-fold nucleic acid binding domain 18 95 1.2E-16 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 583 34.171 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 SUPERFAMILY SSF55681 116 583 8.0E-105 T 13-10-2018 P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 473 489 4.6E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 4.6E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 4.6E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 517 531 4.6E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 SUPERFAMILY SSF55261 291 421 7.03E-46 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 Gene3D G3DSA:3.30.1360.30 273 422 7.6E-200 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 Gene3D G3DSA:2.40.50.140 1 106 4.5E-35 T 13-10-2018 P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 557 9.9E-111 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_15125 16e54bd9ba5b851c321d0d045d5fcc6a 587 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 2.0E-250 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Pfam PF00562 RNA polymerase Rpb2, domain 6 743 1302 1.8E-161 T 13-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 SUPERFAMILY SSF64484 12 1379 0.0 T 13-10-2018 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Gene3D G3DSA:3.90.1110.10 307 464 6.8E-29 T 13-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Pfam PF04565 RNA polymerase Rpb2, domain 3 539 606 1.6E-30 T 13-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1101 1113 - T 13-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Pfam PF10385 RNA polymerase beta subunit external 1 domain 617 682 3.1E-20 T 13-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Gene3D G3DSA:2.40.270.10 816 858 3.9E-7 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Gene3D G3DSA:2.40.50.150 859 980 2.1E-44 T 13-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Gene3D G3DSA:3.90.1800.10 1290 1344 8.6E-11 T 13-10-2018 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Gene3D G3DSA:2.40.270.10 1054 1280 3.6E-86 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Pfam PF04560 RNA polymerase Rpb2, domain 7 1304 1378 2.1E-26 T 13-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Pfam PF04563 RNA polymerase beta subunit 26 525 3.7E-42 T 13-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1377 0.0 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Gene3D G3DSA:3.90.1100.10 465 653 5.9E-72 T 13-10-2018 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Gene3D G3DSA:2.40.50.100 740 814 1.3E-32 T 13-10-2018 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Pfam PF04561 RNA polymerase Rpb2, domain 2 155 225 7.7E-8 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1380 12.32 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Gene3D G3DSA:3.90.1100.10 18 176 3.7E-56 T 13-10-2018 P40_18290 4640bbb785fd3eb059dc73131bdb9834 1380 Gene3D G3DSA:3.90.1100.10 671 739 9.2E-21 T 13-10-2018 P40_16305 4f4bc613ea73bce6228e7ce7b30decec 889 SUPERFAMILY SSF52518 57 465 5.4E-141 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold P40_16305 4f4bc613ea73bce6228e7ce7b30decec 889 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 8 887 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 P40_16305 4f4bc613ea73bce6228e7ce7b30decec 889 Gene3D G3DSA:3.40.50.970 56 469 7.9E-133 T 13-10-2018 P40_16305 4f4bc613ea73bce6228e7ce7b30decec 889 PIRSF PIRSF000156 1 889 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 P40_16305 4f4bc613ea73bce6228e7ce7b30decec 889 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 105 292 2.2E-9 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 P40_16305 4f4bc613ea73bce6228e7ce7b30decec 889 Gene3D G3DSA:3.40.50.970 470 704 8.9E-110 T 13-10-2018 P40_16305 4f4bc613ea73bce6228e7ce7b30decec 889 SUPERFAMILY SSF52922 700 887 3.71E-55 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 P40_16305 4f4bc613ea73bce6228e7ce7b30decec 889 SUPERFAMILY SSF52518 472 697 1.53E-98 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold P40_16305 4f4bc613ea73bce6228e7ce7b30decec 889 Gene3D G3DSA:3.40.50.920 705 889 1.1E-69 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 P40_01520 bd2ddc35d7e4c111afb5bf4c8109b879 775 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 20 767 7.0E-281 T 13-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 P40_01520 bd2ddc35d7e4c111afb5bf4c8109b879 775 Gene3D G3DSA:3.40.228.10 192 418 5.7E-66 T 13-10-2018 P40_01520 bd2ddc35d7e4c111afb5bf4c8109b879 775 Gene3D G3DSA:3.40.50.740 125 498 5.7E-66 T 13-10-2018 P40_01520 bd2ddc35d7e4c111afb5bf4c8109b879 775 SUPERFAMILY SSF53706 55 637 2.09E-138 T 13-10-2018 P40_01520 bd2ddc35d7e4c111afb5bf4c8109b879 775 PIRSF PIRSF000144 1 772 0.0 T 13-10-2018 P40_01520 bd2ddc35d7e4c111afb5bf4c8109b879 775 Pfam PF01568 Molydopterin dinucleotide binding domain 654 741 6.1E-10 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 P40_01520 bd2ddc35d7e4c111afb5bf4c8109b879 775 Pfam PF00384 Molybdopterin oxidoreductase 116 498 7.4E-24 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_01520 bd2ddc35d7e4c111afb5bf4c8109b879 775 SUPERFAMILY SSF50692 650 771 1.06E-17 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily P40_18270 30b6853d265ff5d480ec5c64d313826b 699 Gene3D G3DSA:3.30.70.240 610 680 2.0E-87 T 13-10-2018 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 SMART SM00889 486 604 7.4E-62 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 SUPERFAMILY SSF54980 609 696 1.53E-29 T 13-10-2018 IPR035647 EF-G domain III/V-like P40_18270 30b6853d265ff5d480ec5c64d313826b 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 1.5E-67 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 SUPERFAMILY SSF54211 485 604 1.06E-40 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_18270 30b6853d265ff5d480ec5c64d313826b 699 Pfam PF14492 Elongation Factor G, domain II 410 483 6.1E-36 T 13-10-2018 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 Gene3D G3DSA:3.40.50.300 1 298 3.7E-115 T 13-10-2018 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 SUPERFAMILY SSF54980 410 487 7.55E-26 T 13-10-2018 IPR035647 EF-G domain III/V-like P40_18270 30b6853d265ff5d480ec5c64d313826b 699 Gene3D G3DSA:3.30.70.870 439 489 3.4E-26 T 13-10-2018 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 SUPERFAMILY SSF52540 6 287 3.28E-104 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18270 30b6853d265ff5d480ec5c64d313826b 699 Pfam PF03144 Elongation factor Tu domain 2 330 397 3.3E-17 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 Gene3D G3DSA:3.30.230.10 490 693 2.0E-87 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P40_18270 30b6853d265ff5d480ec5c64d313826b 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 7.9E-34 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.8E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 2.8E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.8E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.8E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.8E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site P40_18270 30b6853d265ff5d480ec5c64d313826b 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 698 0.0 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 110.179 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 SUPERFAMILY SSF50447 271 410 3.31E-34 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P40_18270 30b6853d265ff5d480ec5c64d313826b 699 Pfam PF00679 Elongation factor G C-terminus 606 692 8.4E-31 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like P40_18270 30b6853d265ff5d480ec5c64d313826b 699 Gene3D G3DSA:2.40.30.10 299 422 2.3E-51 T 13-10-2018 P40_18270 30b6853d265ff5d480ec5c64d313826b 699 SMART SM00838 606 693 2.3E-58 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like P40_18270 30b6853d265ff5d480ec5c64d313826b 699 Pfam PF03764 Elongation factor G, domain IV 485 603 4.9E-41 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 P40_03235 2c8d9c4da3f1df430d868226fa42fbf8 312 Gene3D G3DSA:3.30.930.10 1 312 7.4E-78 T 13-10-2018 P40_03235 2c8d9c4da3f1df430d868226fa42fbf8 312 PRINTS PR00982 Lysyl-tRNA synthetase signature 30 40 2.3E-8 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 P40_03235 2c8d9c4da3f1df430d868226fa42fbf8 312 PRINTS PR00982 Lysyl-tRNA synthetase signature 71 84 2.3E-8 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 P40_03235 2c8d9c4da3f1df430d868226fa42fbf8 312 PRINTS PR00982 Lysyl-tRNA synthetase signature 89 106 2.3E-8 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 P40_03235 2c8d9c4da3f1df430d868226fa42fbf8 312 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 119 6.8E-15 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_03235 2c8d9c4da3f1df430d868226fa42fbf8 312 Pfam PF00152 tRNA synthetases class II (D, K and N) 192 310 2.1E-19 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_03235 2c8d9c4da3f1df430d868226fa42fbf8 312 SUPERFAMILY SSF55681 11 309 8.71E-61 T 13-10-2018 P40_03235 2c8d9c4da3f1df430d868226fa42fbf8 312 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 16 307 1.5E-102 T 13-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 P40_00455 eb25a4541c71ec4b1fb32eaeb38929df 270 SUPERFAMILY SSF51735 6 161 2.11E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_00455 eb25a4541c71ec4b1fb32eaeb38929df 270 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 100 4.1E-19 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal P40_00455 eb25a4541c71ec4b1fb32eaeb38929df 270 PIRSF PIRSF000193 3 270 2.9E-78 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 P40_00455 eb25a4541c71ec4b1fb32eaeb38929df 270 Gene3D G3DSA:1.10.3730.10 166 270 5.9E-41 T 13-10-2018 P40_00455 eb25a4541c71ec4b1fb32eaeb38929df 270 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 268 1.5E-36 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 P40_00455 eb25a4541c71ec4b1fb32eaeb38929df 270 Gene3D G3DSA:3.40.50.720 2 165 1.5E-52 T 13-10-2018 P40_00455 eb25a4541c71ec4b1fb32eaeb38929df 270 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 26.79 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 P40_00455 eb25a4541c71ec4b1fb32eaeb38929df 270 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 P40_00455 eb25a4541c71ec4b1fb32eaeb38929df 270 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 2.2E-80 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 P40_00455 eb25a4541c71ec4b1fb32eaeb38929df 270 SUPERFAMILY SSF48179 163 268 1.87E-34 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_21330 6a925f8542052d350e50506175056c0c 698 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 613 687 1.2E-10 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_21330 6a925f8542052d350e50506175056c0c 698 Gene3D G3DSA:2.140.10.10 26 601 5.5E-243 T 13-10-2018 P40_21330 6a925f8542052d350e50506175056c0c 698 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 265 286 - T 13-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 P40_21330 6a925f8542052d350e50506175056c0c 698 SUPERFAMILY SSF46626 604 690 3.48E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_21330 6a925f8542052d350e50506175056c0c 698 Gene3D G3DSA:1.10.760.10 602 698 2.2E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_21330 6a925f8542052d350e50506175056c0c 698 SMART SM00564 143 175 1.7E-7 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_21330 6a925f8542052d350e50506175056c0c 698 SMART SM00564 93 124 8.7E-8 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_21330 6a925f8542052d350e50506175056c0c 698 SMART SM00564 189 227 0.0065 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_21330 6a925f8542052d350e50506175056c0c 698 SMART SM00564 293 320 98.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_21330 6a925f8542052d350e50506175056c0c 698 SMART SM00564 504 536 0.0024 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_21330 6a925f8542052d350e50506175056c0c 698 SUPERFAMILY SSF50998 46 596 3.4E-173 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily P40_21330 6a925f8542052d350e50506175056c0c 698 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 35 564 1.3E-204 T 13-10-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 P40_21330 6a925f8542052d350e50506175056c0c 698 Pfam PF13360 PQQ-like domain 78 225 4.2E-18 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_21330 6a925f8542052d350e50506175056c0c 698 Pfam PF13360 PQQ-like domain 478 535 1.6E-5 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_11340 188e5a2043d6adb91a3487c5c280e757 380 PIRSF PIRSF001369 3 380 6.8E-118 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type P40_11340 188e5a2043d6adb91a3487c5c280e757 380 Pfam PF00285 Citrate synthase, C-terminal domain 11 362 4.4E-116 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_11340 188e5a2043d6adb91a3487c5c280e757 380 Gene3D G3DSA:1.10.580.10 32 360 5.2E-121 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 P40_11340 188e5a2043d6adb91a3487c5c280e757 380 PRINTS PR00143 Citrate synthase signature 131 144 1.2E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_11340 188e5a2043d6adb91a3487c5c280e757 380 PRINTS PR00143 Citrate synthase signature 256 276 1.2E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_11340 188e5a2043d6adb91a3487c5c280e757 380 PRINTS PR00143 Citrate synthase signature 203 231 1.2E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_11340 188e5a2043d6adb91a3487c5c280e757 380 PRINTS PR00143 Citrate synthase signature 313 329 1.2E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_11340 188e5a2043d6adb91a3487c5c280e757 380 PRINTS PR00143 Citrate synthase signature 333 347 1.2E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_11340 188e5a2043d6adb91a3487c5c280e757 380 PRINTS PR00143 Citrate synthase signature 181 196 1.2E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_11340 188e5a2043d6adb91a3487c5c280e757 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 380 3.8E-156 T 13-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 P40_11340 188e5a2043d6adb91a3487c5c280e757 380 Gene3D G3DSA:1.10.230.10 229 327 5.2E-121 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain P40_11340 188e5a2043d6adb91a3487c5c280e757 380 SUPERFAMILY SSF48256 10 380 4.06E-127 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 P40_11250 7e4280070406922c97597aece489309f 150 Gene3D G3DSA:3.10.129.10 4 149 1.0E-53 T 13-10-2018 P40_11250 7e4280070406922c97597aece489309f 150 SUPERFAMILY SSF54637 19 145 3.84E-23 T 13-10-2018 IPR029069 HotDog domain superfamily P40_11250 7e4280070406922c97597aece489309f 150 Pfam PF03061 Thioesterase superfamily 62 134 2.8E-13 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_19420 869858b1c6ef6e103d6621e079aeebe7 331 Pfam PF00175 Oxidoreductase NAD-binding domain 205 307 1.1E-14 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 P40_19420 869858b1c6ef6e103d6621e079aeebe7 331 SUPERFAMILY SSF63380 100 193 1.1E-14 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel P40_19420 869858b1c6ef6e103d6621e079aeebe7 331 SUPERFAMILY SSF54292 5 91 3.54E-18 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 P40_19420 869858b1c6ef6e103d6621e079aeebe7 331 Gene3D G3DSA:3.40.50.80 198 328 1.2E-25 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_19420 869858b1c6ef6e103d6621e079aeebe7 331 SUPERFAMILY SSF52343 199 326 1.57E-29 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_19420 869858b1c6ef6e103d6621e079aeebe7 331 PRINTS PR00410 Phenol hydroxylase reductase family signature 229 238 1.5E-11 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 P40_19420 869858b1c6ef6e103d6621e079aeebe7 331 PRINTS PR00410 Phenol hydroxylase reductase family signature 145 152 1.5E-11 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 P40_19420 869858b1c6ef6e103d6621e079aeebe7 331 PRINTS PR00410 Phenol hydroxylase reductase family signature 204 223 1.5E-11 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 P40_19420 869858b1c6ef6e103d6621e079aeebe7 331 PRINTS PR00410 Phenol hydroxylase reductase family signature 130 142 1.5E-11 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 P40_19420 869858b1c6ef6e103d6621e079aeebe7 331 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 79 5.5E-10 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 P40_19420 869858b1c6ef6e103d6621e079aeebe7 331 Gene3D G3DSA:2.40.30.10 99 195 1.2E-14 T 13-10-2018 P40_19420 869858b1c6ef6e103d6621e079aeebe7 331 Gene3D G3DSA:3.10.20.30 3 93 1.9E-17 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_11385 13fe261885e1e4a3538a370ff6981780 524 Gene3D G3DSA:3.10.350.10 334 395 4.4E-13 T 13-10-2018 IPR036779 LysM domain superfamily P40_11385 13fe261885e1e4a3538a370ff6981780 524 Gene3D G3DSA:3.10.350.10 400 466 1.7E-14 T 13-10-2018 IPR036779 LysM domain superfamily P40_11385 13fe261885e1e4a3538a370ff6981780 524 Pfam PF01464 Transglycosylase SLT domain 120 226 1.6E-22 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 P40_11385 13fe261885e1e4a3538a370ff6981780 524 SUPERFAMILY SSF53955 111 265 1.61E-42 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily P40_11385 13fe261885e1e4a3538a370ff6981780 524 SMART SM00257 409 453 4.2E-10 T 13-10-2018 IPR018392 LysM domain P40_11385 13fe261885e1e4a3538a370ff6981780 524 SMART SM00257 472 517 9.4E-10 T 13-10-2018 IPR018392 LysM domain P40_11385 13fe261885e1e4a3538a370ff6981780 524 SMART SM00257 344 387 1.4E-10 T 13-10-2018 IPR018392 LysM domain P40_11385 13fe261885e1e4a3538a370ff6981780 524 SUPERFAMILY SSF54106 471 516 3.14E-9 T 13-10-2018 P40_11385 13fe261885e1e4a3538a370ff6981780 524 SUPERFAMILY SSF54106 343 387 3.4E-9 T 13-10-2018 P40_11385 13fe261885e1e4a3538a370ff6981780 524 Pfam PF01476 LysM domain 410 452 9.2E-13 T 13-10-2018 IPR018392 LysM domain P40_11385 13fe261885e1e4a3538a370ff6981780 524 Pfam PF01476 LysM domain 345 387 9.8E-9 T 13-10-2018 IPR018392 LysM domain P40_11385 13fe261885e1e4a3538a370ff6981780 524 Pfam PF01476 LysM domain 473 515 1.0E-9 T 13-10-2018 IPR018392 LysM domain P40_11385 13fe261885e1e4a3538a370ff6981780 524 Gene3D G3DSA:1.10.530.10 109 261 2.1E-31 T 13-10-2018 P40_11385 13fe261885e1e4a3538a370ff6981780 524 Gene3D G3DSA:3.10.350.10 470 518 8.4E-13 T 13-10-2018 IPR036779 LysM domain superfamily P40_11385 13fe261885e1e4a3538a370ff6981780 524 SUPERFAMILY SSF54106 409 453 9.81E-11 T 13-10-2018 P40_20755 f4cdef90ebc3654e52799149b3e8ece6 287 PIRSF PIRSF007580 1 279 6.1E-75 T 13-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 P40_20755 f4cdef90ebc3654e52799149b3e8ece6 287 Pfam PF10118 Predicted metal-dependent hydrolase 16 262 3.1E-83 T 13-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 P40_00705 9c577edb34236819a4c953925a9a5e46 229 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 35.76 T 13-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 P40_00705 9c577edb34236819a4c953925a9a5e46 229 ProSitePatterns PS00221 MIP family signature. 60 68 - T 13-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 P40_00705 9c577edb34236819a4c953925a9a5e46 229 SUPERFAMILY SSF81338 2 225 1.57E-64 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 P40_00705 9c577edb34236819a4c953925a9a5e46 229 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 4.4E-56 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 P40_00705 9c577edb34236819a4c953925a9a5e46 229 Pfam PF00230 Major intrinsic protein 2 221 1.3E-46 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 P40_00705 9c577edb34236819a4c953925a9a5e46 229 Gene3D G3DSA:1.20.1080.10 1 229 2.8E-82 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 P40_00705 9c577edb34236819a4c953925a9a5e46 229 PRINTS PR00783 Major intrinsic protein family signature 79 98 2.6E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 P40_00705 9c577edb34236819a4c953925a9a5e46 229 PRINTS PR00783 Major intrinsic protein family signature 135 153 2.6E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 P40_00705 9c577edb34236819a4c953925a9a5e46 229 PRINTS PR00783 Major intrinsic protein family signature 42 66 2.6E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 P40_00705 9c577edb34236819a4c953925a9a5e46 229 PRINTS PR00783 Major intrinsic protein family signature 165 187 2.6E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 P40_00705 9c577edb34236819a4c953925a9a5e46 229 PRINTS PR00783 Major intrinsic protein family signature 2 21 2.6E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 P40_00705 9c577edb34236819a4c953925a9a5e46 229 PRINTS PR00783 Major intrinsic protein family signature 204 224 2.6E-50 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 P40_18040 446b4806ef5aed47050a884c35c12d1e 668 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 522 550 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_18040 446b4806ef5aed47050a884c35c12d1e 668 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 460 471 8.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18040 446b4806ef5aed47050a884c35c12d1e 668 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 535 554 8.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18040 446b4806ef5aed47050a884c35c12d1e 668 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 515 523 8.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18040 446b4806ef5aed47050a884c35c12d1e 668 Pfam PF00106 short chain dehydrogenase 385 575 1.9E-54 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18040 446b4806ef5aed47050a884c35c12d1e 668 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 385 569 2.1E-4 T 13-10-2018 P40_18040 446b4806ef5aed47050a884c35c12d1e 668 Gene3D G3DSA:3.40.50.720 362 635 1.7E-69 T 13-10-2018 P40_18040 446b4806ef5aed47050a884c35c12d1e 668 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 509 525 2.0E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18040 446b4806ef5aed47050a884c35c12d1e 668 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 386 403 2.0E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18040 446b4806ef5aed47050a884c35c12d1e 668 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 535 554 2.0E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18040 446b4806ef5aed47050a884c35c12d1e 668 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 460 471 2.0E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18040 446b4806ef5aed47050a884c35c12d1e 668 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 556 573 2.0E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18040 446b4806ef5aed47050a884c35c12d1e 668 SUPERFAMILY SSF51735 1 362 7.3E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_18040 446b4806ef5aed47050a884c35c12d1e 668 SUPERFAMILY SSF51735 382 602 3.4E-65 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_18040 446b4806ef5aed47050a884c35c12d1e 668 Gene3D G3DSA:3.40.50.720 1 361 2.2E-67 T 13-10-2018 P40_18040 446b4806ef5aed47050a884c35c12d1e 668 Pfam PF07993 Male sterility protein 5 234 1.4E-49 T 13-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 P40_07700 ac5e066f3ba7d524c4ecb097aeacb70a 233 SUPERFAMILY SSF46894 145 212 9.52E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_07700 ac5e066f3ba7d524c4ecb097aeacb70a 233 Gene3D G3DSA:1.10.10.10 153 216 3.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_07700 ac5e066f3ba7d524c4ecb097aeacb70a 233 SMART SM00448 2 116 7.6E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_07700 ac5e066f3ba7d524c4ecb097aeacb70a 233 Pfam PF00072 Response regulator receiver domain 4 116 2.5E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_07700 ac5e066f3ba7d524c4ecb097aeacb70a 233 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_07700 ac5e066f3ba7d524c4ecb097aeacb70a 233 Gene3D G3DSA:3.40.50.2300 2 129 2.2E-28 T 13-10-2018 P40_07700 ac5e066f3ba7d524c4ecb097aeacb70a 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 6.2E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_07700 ac5e066f3ba7d524c4ecb097aeacb70a 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 6.2E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_07700 ac5e066f3ba7d524c4ecb097aeacb70a 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 6.2E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_07700 ac5e066f3ba7d524c4ecb097aeacb70a 233 SUPERFAMILY SSF52172 1 130 7.68E-27 T 13-10-2018 IPR011006 CheY-like superfamily P40_07700 ac5e066f3ba7d524c4ecb097aeacb70a 233 SMART SM00421 152 209 3.5E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_07700 ac5e066f3ba7d524c4ecb097aeacb70a 233 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 5.4E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_19680 01ba9ffe6c2fb65a5ac330d94b97fe47 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 320 5.0E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_19680 01ba9ffe6c2fb65a5ac330d94b97fe47 471 Gene3D G3DSA:1.10.287.130 204 318 8.5E-13 T 13-10-2018 P40_19680 01ba9ffe6c2fb65a5ac330d94b97fe47 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 470 2.6E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_19680 01ba9ffe6c2fb65a5ac330d94b97fe47 471 SMART SM00304 205 257 6.1E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_19680 01ba9ffe6c2fb65a5ac330d94b97fe47 471 SMART SM00388 257 322 4.1E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_19680 01ba9ffe6c2fb65a5ac330d94b97fe47 471 SUPERFAMILY SSF55874 312 470 8.28E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_19680 01ba9ffe6c2fb65a5ac330d94b97fe47 471 SUPERFAMILY SSF103190 58 178 2.28E-10 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily P40_19680 01ba9ffe6c2fb65a5ac330d94b97fe47 471 Gene3D G3DSA:3.30.450.20 26 168 1.8E-7 T 13-10-2018 P40_19680 01ba9ffe6c2fb65a5ac330d94b97fe47 471 SUPERFAMILY SSF47384 243 320 2.75E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_19680 01ba9ffe6c2fb65a5ac330d94b97fe47 471 Gene3D G3DSA:3.30.565.10 328 471 3.7E-20 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_19680 01ba9ffe6c2fb65a5ac330d94b97fe47 471 SMART SM00387 365 470 6.9E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_19680 01ba9ffe6c2fb65a5ac330d94b97fe47 471 Pfam PF00672 HAMP domain 205 254 1.6E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_10445 2c1090573a97d570c1caa44822ef7ca6 518 Gene3D G3DSA:3.30.300.310 411 512 7.9E-31 T 13-10-2018 P40_10445 2c1090573a97d570c1caa44822ef7ca6 518 Pfam PF13193 AMP-binding enzyme C-terminal domain 424 499 5.6E-18 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_10445 2c1090573a97d570c1caa44822ef7ca6 518 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_10445 2c1090573a97d570c1caa44822ef7ca6 518 Pfam PF00501 AMP-binding enzyme 14 415 6.4E-101 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_10445 2c1090573a97d570c1caa44822ef7ca6 518 Gene3D G3DSA:3.40.50.12780 2 408 1.0E-119 T 13-10-2018 P40_10445 2c1090573a97d570c1caa44822ef7ca6 518 SUPERFAMILY SSF56801 3 512 2.35E-152 T 13-10-2018 P40_16440 746a4eee3813a6b195f4dfefe1c4c630 483 Gene3D G3DSA:3.40.50.720 24 110 8.4E-32 T 13-10-2018 P40_16440 746a4eee3813a6b195f4dfefe1c4c630 483 SUPERFAMILY SSF53623 109 326 3.27E-74 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 P40_16440 746a4eee3813a6b195f4dfefe1c4c630 483 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 23 480 43.931 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_16440 746a4eee3813a6b195f4dfefe1c4c630 483 Pfam PF08245 Mur ligase middle domain 128 308 3.0E-32 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 P40_16440 746a4eee3813a6b195f4dfefe1c4c630 483 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 26 474 8.8E-178 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_16440 746a4eee3813a6b195f4dfefe1c4c630 483 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 417 1.3E-20 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 P40_16440 746a4eee3813a6b195f4dfefe1c4c630 483 Pfam PF01225 Mur ligase family, catalytic domain 26 122 5.4E-27 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 P40_16440 746a4eee3813a6b195f4dfefe1c4c630 483 Gene3D G3DSA:3.40.1190.10 112 325 3.5E-85 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 P40_16440 746a4eee3813a6b195f4dfefe1c4c630 483 SUPERFAMILY SSF51984 24 110 1.15E-27 T 13-10-2018 P40_16440 746a4eee3813a6b195f4dfefe1c4c630 483 SUPERFAMILY SSF53244 327 476 2.75E-48 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 P40_16440 746a4eee3813a6b195f4dfefe1c4c630 483 Gene3D G3DSA:3.90.190.20 326 482 1.0E-48 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 P40_21260 0890caa89ea6d0abd8e1fa5ce3fe6533 296 Pfam PF00005 ABC transporter 65 220 9.9E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_21260 0890caa89ea6d0abd8e1fa5ce3fe6533 296 SMART SM00382 73 268 1.3E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_21260 0890caa89ea6d0abd8e1fa5ce3fe6533 296 Gene3D G3DSA:3.40.50.300 49 294 6.2E-62 T 13-10-2018 P40_21260 0890caa89ea6d0abd8e1fa5ce3fe6533 296 ProSitePatterns PS00211 ABC transporters family signature. 193 207 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_21260 0890caa89ea6d0abd8e1fa5ce3fe6533 296 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 49 296 8.7E-122 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 P40_21260 0890caa89ea6d0abd8e1fa5ce3fe6533 296 SUPERFAMILY SSF52540 48 283 4.06E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10630 68524e83c74d10939baaeb0d275dd35b 284 Gene3D G3DSA:3.40.50.150 78 278 1.2E-57 T 13-10-2018 P40_10630 68524e83c74d10939baaeb0d275dd35b 284 SUPERFAMILY SSF47757 8 78 1.96E-8 T 13-10-2018 P40_10630 68524e83c74d10939baaeb0d275dd35b 284 Pfam PF01739 CheR methyltransferase, SAM binding domain 79 269 4.2E-41 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal P40_10630 68524e83c74d10939baaeb0d275dd35b 284 PRINTS PR00996 Glutamate methyltransferase family signature 108 128 7.8E-29 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_10630 68524e83c74d10939baaeb0d275dd35b 284 PRINTS PR00996 Glutamate methyltransferase family signature 140 156 7.8E-29 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_10630 68524e83c74d10939baaeb0d275dd35b 284 PRINTS PR00996 Glutamate methyltransferase family signature 72 84 7.8E-29 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_10630 68524e83c74d10939baaeb0d275dd35b 284 PRINTS PR00996 Glutamate methyltransferase family signature 214 228 7.8E-29 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_10630 68524e83c74d10939baaeb0d275dd35b 284 PRINTS PR00996 Glutamate methyltransferase family signature 233 256 7.8E-29 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_10630 68524e83c74d10939baaeb0d275dd35b 284 SMART SM00138 13 276 9.8E-40 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_10630 68524e83c74d10939baaeb0d275dd35b 284 SUPERFAMILY SSF53335 79 258 3.05E-42 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_10630 68524e83c74d10939baaeb0d275dd35b 284 Pfam PF03705 CheR methyltransferase, all-alpha domain 15 65 6.3E-11 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal P40_14595 0671a18e7b799a6233270f2bc13fae4b 458 Gene3D G3DSA:3.30.160.390 2 114 8.5E-13 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily P40_14595 0671a18e7b799a6233270f2bc13fae4b 458 Pfam PF00589 Phage integrase family 267 423 6.4E-14 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 P40_14595 0671a18e7b799a6233270f2bc13fae4b 458 SUPERFAMILY SSF56349 116 447 1.12E-40 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 P40_14595 0671a18e7b799a6233270f2bc13fae4b 458 Gene3D G3DSA:1.10.443.10 230 450 2.6E-18 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 P40_14595 0671a18e7b799a6233270f2bc13fae4b 458 Pfam PF13356 Arm DNA-binding domain 4 91 9.9E-11 T 13-10-2018 IPR025166 Integrase, DNA-binding domain P40_14595 0671a18e7b799a6233270f2bc13fae4b 458 Gene3D G3DSA:1.10.150.130 115 220 2.8E-12 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal P40_19685 66b780ac80c1108d33f8b424c507310e 224 Gene3D G3DSA:1.10.10.10 116 224 6.2E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_19685 66b780ac80c1108d33f8b424c507310e 224 Gene3D G3DSA:3.40.50.2300 1 115 3.1E-33 T 13-10-2018 P40_19685 66b780ac80c1108d33f8b424c507310e 224 SUPERFAMILY SSF46894 127 222 3.12E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_19685 66b780ac80c1108d33f8b424c507310e 224 SMART SM00862 147 221 1.8E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_19685 66b780ac80c1108d33f8b424c507310e 224 Pfam PF00072 Response regulator receiver domain 5 114 6.4E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_19685 66b780ac80c1108d33f8b424c507310e 224 SMART SM00448 3 113 1.2E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_19685 66b780ac80c1108d33f8b424c507310e 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 1.3E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_19685 66b780ac80c1108d33f8b424c507310e 224 SUPERFAMILY SSF52172 4 121 1.07E-37 T 13-10-2018 IPR011006 CheY-like superfamily P40_19160 993f1dc60f9b09af85ec279b7c7ee136 1035 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 70 178 4.4E-27 T 13-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 P40_19160 993f1dc60f9b09af85ec279b7c7ee136 1035 SUPERFAMILY SSF81935 32 180 1.7E-28 T 13-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 P40_19160 993f1dc60f9b09af85ec279b7c7ee136 1035 PIRSF PIRSF000197 16 1029 0.0 T 13-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 P40_19160 993f1dc60f9b09af85ec279b7c7ee136 1035 Gene3D G3DSA:3.40.309.10 788 982 1.7E-135 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_19160 993f1dc60f9b09af85ec279b7c7ee136 1035 Gene3D G3DSA:3.20.20.220 125 517 1.2E-120 T 13-10-2018 P40_19160 993f1dc60f9b09af85ec279b7c7ee136 1035 SUPERFAMILY SSF53720 528 1017 5.24E-117 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_19160 993f1dc60f9b09af85ec279b7c7ee136 1035 Pfam PF00171 Aldehyde dehydrogenase family 549 1011 6.3E-106 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_19160 993f1dc60f9b09af85ec279b7c7ee136 1035 Pfam PF01619 Proline dehydrogenase 190 476 8.0E-86 T 13-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 P40_19160 993f1dc60f9b09af85ec279b7c7ee136 1035 Gene3D G3DSA:3.40.605.10 550 1014 1.7E-135 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_19160 993f1dc60f9b09af85ec279b7c7ee136 1035 SUPERFAMILY SSF51730 182 509 1.61E-99 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like P40_19160 993f1dc60f9b09af85ec279b7c7ee136 1035 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 528 1011 4.0E-152 T 13-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 P40_03035 6f208e267e12bc924cbb8f859e2e39fe 255 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 9 182 1.5E-16 T 13-10-2018 IPR002654 Glycosyl transferase, family 25 P40_18505 d07d4c0133ae377852e3e69fe14f42c6 149 SUPERFAMILY SSF109635 15 108 6.54E-36 T 13-10-2018 IPR037187 DksA, N-terminal domain superfamily P40_18505 d07d4c0133ae377852e3e69fe14f42c6 149 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 112 136 - T 13-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site P40_18505 d07d4c0133ae377852e3e69fe14f42c6 149 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 141 1.0E-10 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 P40_18505 d07d4c0133ae377852e3e69fe14f42c6 149 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 26 148 30.429 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 P40_18505 d07d4c0133ae377852e3e69fe14f42c6 149 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 30 138 1.5E-51 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 P40_18505 d07d4c0133ae377852e3e69fe14f42c6 149 SUPERFAMILY SSF57716 109 147 2.0E-10 T 13-10-2018 P40_18505 d07d4c0133ae377852e3e69fe14f42c6 149 Gene3D G3DSA:1.20.120.910 18 148 2.2E-39 T 13-10-2018 P40_19945 d8b29692cf7a85c24d25717d5482ff77 295 SUPERFAMILY SSF161098 19 270 5.63E-58 T 13-10-2018 IPR035906 MetI-like superfamily P40_19945 d8b29692cf7a85c24d25717d5482ff77 295 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 21 279 6.6E-126 T 13-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 P40_19945 d8b29692cf7a85c24d25717d5482ff77 295 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 13 275 5.9E-101 T 13-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 P40_19945 d8b29692cf7a85c24d25717d5482ff77 295 Gene3D G3DSA:1.10.3720.10 20 280 1.0E-65 T 13-10-2018 IPR035906 MetI-like superfamily P40_19945 d8b29692cf7a85c24d25717d5482ff77 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 273 2.1E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_16200 1e5cbf5d678c04152537b6c9cca588b6 199 SUPERFAMILY SSF144091 12 188 6.8E-23 T 13-10-2018 P40_16200 1e5cbf5d678c04152537b6c9cca588b6 199 Gene3D G3DSA:1.20.1540.10 7 194 1.3E-11 T 13-10-2018 IPR035952 Rhomboid-like superfamily P40_16200 1e5cbf5d678c04152537b6c9cca588b6 199 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 31 183 8.5E-43 T 13-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria P40_16200 1e5cbf5d678c04152537b6c9cca588b6 199 Pfam PF01694 Rhomboid family 41 186 1.4E-12 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 P40_03715 4d0ebccdc75a018f5451f42db3d18848 250 Pfam PF00588 SpoU rRNA Methylase family 101 242 4.1E-37 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 P40_03715 4d0ebccdc75a018f5451f42db3d18848 250 SUPERFAMILY SSF75217 93 245 5.1E-45 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases P40_03715 4d0ebccdc75a018f5451f42db3d18848 250 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 9 80 1.2E-11 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 P40_03715 4d0ebccdc75a018f5451f42db3d18848 250 Gene3D G3DSA:3.30.1330.30 2 80 8.3E-19 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like P40_03715 4d0ebccdc75a018f5451f42db3d18848 250 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 8 244 3.9E-57 T 13-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 P40_03715 4d0ebccdc75a018f5451f42db3d18848 250 SUPERFAMILY SSF55315 4 80 8.36E-10 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like P40_03715 4d0ebccdc75a018f5451f42db3d18848 250 SMART SM00967 6 84 1.2E-12 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 P40_03715 4d0ebccdc75a018f5451f42db3d18848 250 Gene3D G3DSA:3.40.1280.10 86 248 2.9E-53 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 Gene3D G3DSA:1.10.3370.10 17 441 4.1E-161 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 Hamap MF_01465 Protein translocase subunit SecY [secY]. 15 445 28.686 T 13-10-2018 IPR026593 Protein translocase subunit SecY P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 ProSitePatterns PS00755 Protein secY signature 1. 81 100 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 PRINTS PR00303 Preprotein translocase SecY subunit signature 188 211 8.0E-94 T 13-10-2018 P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 PRINTS PR00303 Preprotein translocase SecY subunit signature 382 400 8.0E-94 T 13-10-2018 P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 PRINTS PR00303 Preprotein translocase SecY subunit signature 414 432 8.0E-94 T 13-10-2018 P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 PRINTS PR00303 Preprotein translocase SecY subunit signature 121 144 8.0E-94 T 13-10-2018 P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 PRINTS PR00303 Preprotein translocase SecY subunit signature 162 187 8.0E-94 T 13-10-2018 P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 PRINTS PR00303 Preprotein translocase SecY subunit signature 280 299 8.0E-94 T 13-10-2018 P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 PRINTS PR00303 Preprotein translocase SecY subunit signature 28 46 8.0E-94 T 13-10-2018 P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 PRINTS PR00303 Preprotein translocase SecY subunit signature 327 349 8.0E-94 T 13-10-2018 P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 PRINTS PR00303 Preprotein translocase SecY subunit signature 80 100 8.0E-94 T 13-10-2018 P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 SUPERFAMILY SSF103491 22 436 9.55E-128 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 26 441 5.6E-129 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 Pfam PF00344 SecY translocase 81 428 2.5E-118 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P40_18155 6ede226a488c4e5bf811f9e21bd42988 460 PIRSF PIRSF004557 16 453 5.1E-125 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P40_20465 3249f7e104b9a1e39f3c41ecf740b554 435 PIRSF PIRSF006066 7 435 8.2E-78 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_20465 3249f7e104b9a1e39f3c41ecf740b554 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 425 4.4E-78 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_20465 3249f7e104b9a1e39f3c41ecf740b554 435 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 431 1.6E-82 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_12810 afeb8c1852d5fcbece583bfee1eafd13 358 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 2 355 52.514 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 P40_12810 afeb8c1852d5fcbece583bfee1eafd13 358 SUPERFAMILY SSF53659 3 355 6.66E-124 T 13-10-2018 P40_12810 afeb8c1852d5fcbece583bfee1eafd13 358 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 3 349 1.3E-155 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 P40_12810 afeb8c1852d5fcbece583bfee1eafd13 358 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 P40_12810 afeb8c1852d5fcbece583bfee1eafd13 358 SMART SM01329 3 351 2.8E-206 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 P40_12810 afeb8c1852d5fcbece583bfee1eafd13 358 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 351 2.1E-136 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 P40_12810 afeb8c1852d5fcbece583bfee1eafd13 358 Gene3D G3DSA:3.40.718.10 2 357 1.9E-149 T 13-10-2018 P40_05715 8f008d7cf90933777b93fe58903a7a1e 416 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 409 31.605 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 P40_05715 8f008d7cf90933777b93fe58903a7a1e 416 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 1 396 2.1E-151 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 P40_05715 8f008d7cf90933777b93fe58903a7a1e 416 PIRSF PIRSF001549 1 411 2.4E-118 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 P40_05715 8f008d7cf90933777b93fe58903a7a1e 416 Pfam PF13393 Histidyl-tRNA synthetase 1 302 1.9E-53 T 13-10-2018 P40_05715 8f008d7cf90933777b93fe58903a7a1e 416 Gene3D G3DSA:3.40.50.800 316 410 1.4E-23 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily P40_05715 8f008d7cf90933777b93fe58903a7a1e 416 Gene3D G3DSA:3.30.930.10 1 313 9.2E-118 T 13-10-2018 P40_05715 8f008d7cf90933777b93fe58903a7a1e 416 SUPERFAMILY SSF55681 1 310 2.79E-104 T 13-10-2018 P40_05715 8f008d7cf90933777b93fe58903a7a1e 416 SUPERFAMILY SSF52954 315 411 5.73E-21 T 13-10-2018 P40_05715 8f008d7cf90933777b93fe58903a7a1e 416 Pfam PF03129 Anticodon binding domain 323 409 1.8E-9 T 13-10-2018 IPR004154 Anticodon-binding P40_16670 5b82e4dfdb01ebb1e9aaa586060db6f6 349 SUPERFAMILY SSF53098 164 332 3.29E-29 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_16670 5b82e4dfdb01ebb1e9aaa586060db6f6 349 Pfam PF00665 Integrase core domain 160 282 4.5E-23 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 P40_16670 5b82e4dfdb01ebb1e9aaa586060db6f6 349 SUPERFAMILY SSF46689 12 114 1.09E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_16670 5b82e4dfdb01ebb1e9aaa586060db6f6 349 Gene3D G3DSA:3.30.420.10 164 337 6.2E-18 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_16670 5b82e4dfdb01ebb1e9aaa586060db6f6 349 Pfam PF13551 Winged helix-turn helix 10 73 7.8E-9 T 13-10-2018 P40_08370 5b82e4dfdb01ebb1e9aaa586060db6f6 349 SUPERFAMILY SSF53098 164 332 3.29E-29 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_08370 5b82e4dfdb01ebb1e9aaa586060db6f6 349 Pfam PF00665 Integrase core domain 160 282 4.5E-23 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 P40_08370 5b82e4dfdb01ebb1e9aaa586060db6f6 349 SUPERFAMILY SSF46689 12 114 1.09E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_08370 5b82e4dfdb01ebb1e9aaa586060db6f6 349 Gene3D G3DSA:3.30.420.10 164 337 6.2E-18 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_08370 5b82e4dfdb01ebb1e9aaa586060db6f6 349 Pfam PF13551 Winged helix-turn helix 10 73 7.8E-9 T 13-10-2018 P40_09630 85a5adf22c740c6d03aeab12296b182d 273 Gene3D G3DSA:3.20.20.60 2 273 6.8E-80 T 13-10-2018 P40_09630 85a5adf22c740c6d03aeab12296b182d 273 PIRSF PIRSF015582 2 273 6.9E-77 T 13-10-2018 IPR011206 Citrate lyase beta subunit-like P40_09630 85a5adf22c740c6d03aeab12296b182d 273 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 10 216 7.1E-32 T 13-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 P40_09630 85a5adf22c740c6d03aeab12296b182d 273 SUPERFAMILY SSF51621 7 228 5.58E-58 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 P40_04840 1cfec317cf4c7b6291fcec23693c79f0 294 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 290 5.9E-91 T 13-10-2018 P40_04840 1cfec317cf4c7b6291fcec23693c79f0 294 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 290 31.684 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 P40_04840 1cfec317cf4c7b6291fcec23693c79f0 294 PIRSF PIRSF000401 1 292 2.2E-86 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 P40_04840 1cfec317cf4c7b6291fcec23693c79f0 294 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 284 3.4E-86 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 P40_04840 1cfec317cf4c7b6291fcec23693c79f0 294 Gene3D G3DSA:3.40.50.150 100 292 5.8E-57 T 13-10-2018 P40_04840 1cfec317cf4c7b6291fcec23693c79f0 294 SUPERFAMILY SSF53335 81 284 1.79E-42 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_20935 75fe2d4e2b650c33d040d7253a74cb16 501 Pfam PF00171 Aldehyde dehydrogenase family 15 477 7.0E-137 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_20935 75fe2d4e2b650c33d040d7253a74cb16 501 Gene3D G3DSA:3.40.309.10 250 450 3.2E-143 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_20935 75fe2d4e2b650c33d040d7253a74cb16 501 SUPERFAMILY SSF53720 3 484 3.8E-145 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_20935 75fe2d4e2b650c33d040d7253a74cb16 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 7 481 2.5E-238 T 13-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 P40_20935 75fe2d4e2b650c33d040d7253a74cb16 501 Gene3D G3DSA:3.40.605.10 24 458 3.2E-143 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_09945 4ce20f763e95e22d52d3929051e8d249 201 SUPERFAMILY SSF48498 85 197 6.68E-23 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_09945 4ce20f763e95e22d52d3929051e8d249 201 Pfam PF08359 YsiA-like protein, C-terminal region 74 192 3.5E-9 T 13-10-2018 IPR013570 Transcription regulator YsiA, C-terminal P40_09945 4ce20f763e95e22d52d3929051e8d249 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 61 2.1E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_09945 4ce20f763e95e22d52d3929051e8d249 201 Gene3D G3DSA:1.10.357.10 55 193 1.2E-35 T 13-10-2018 P40_09945 4ce20f763e95e22d52d3929051e8d249 201 Gene3D G3DSA:1.10.10.60 1 53 3.6E-13 T 13-10-2018 P40_09945 4ce20f763e95e22d52d3929051e8d249 201 SUPERFAMILY SSF46689 7 89 4.62E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_09945 4ce20f763e95e22d52d3929051e8d249 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.5E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_09945 4ce20f763e95e22d52d3929051e8d249 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.5E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_15015 ae790a7afb03806f4288ef2e36fd80a2 211 Gene3D G3DSA:3.30.310.170 100 156 1.9E-6 T 13-10-2018 P40_15015 ae790a7afb03806f4288ef2e36fd80a2 211 Pfam PF06804 NlpB/DapX lipoprotein 103 151 9.5E-8 T 13-10-2018 IPR010653 NlpB/DapX lipoprotein P40_09805 7c483155d9ba9dfcf6f24eb2dca59dd1 549 Gene3D G3DSA:1.10.1220.110 113 167 7.6E-180 T 13-10-2018 P40_09805 7c483155d9ba9dfcf6f24eb2dca59dd1 549 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 98 121 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_09805 7c483155d9ba9dfcf6f24eb2dca59dd1 549 SUPERFAMILY SSF54373 308 490 6.77E-53 T 13-10-2018 P40_09805 7c483155d9ba9dfcf6f24eb2dca59dd1 549 Gene3D G3DSA:4.10.450.10 54 213 7.6E-180 T 13-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 P40_09805 7c483155d9ba9dfcf6f24eb2dca59dd1 549 Gene3D G3DSA:3.30.410.40 168 487 7.6E-180 T 13-10-2018 P40_09805 7c483155d9ba9dfcf6f24eb2dca59dd1 549 Pfam PF05199 GMC oxidoreductase 404 540 1.6E-37 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 P40_09805 7c483155d9ba9dfcf6f24eb2dca59dd1 549 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 272 286 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_09805 7c483155d9ba9dfcf6f24eb2dca59dd1 549 Gene3D G3DSA:3.50.50.60 20 543 7.6E-180 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_09805 7c483155d9ba9dfcf6f24eb2dca59dd1 549 PIRSF PIRSF000137 2 549 3.1E-154 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_09805 7c483155d9ba9dfcf6f24eb2dca59dd1 549 Pfam PF00732 GMC oxidoreductase 21 313 1.3E-96 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_09805 7c483155d9ba9dfcf6f24eb2dca59dd1 549 SUPERFAMILY SSF51905 19 548 4.86E-90 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 Gene3D G3DSA:3.40.50.20 10 136 2.7E-46 T 13-10-2018 P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 SUPERFAMILY SSF52440 9 119 3.6E-40 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 Gene3D G3DSA:3.90.226.10 828 1072 1.1E-51 T 13-10-2018 P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 SMART SM00878 340 448 8.2E-40 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 SUPERFAMILY SSF52096 568 820 1.66E-42 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 Gene3D G3DSA:3.30.470.20 208 460 1.6E-93 T 13-10-2018 P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 Pfam PF00364 Biotin-requiring enzyme 496 550 6.8E-11 T 13-10-2018 IPR000089 Biotin/lipoyl attachment P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 Pfam PF01039 Carboxyl transferase domain 596 1058 5.1E-66 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 SUPERFAMILY SSF52096 798 1071 8.53E-46 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 121 324 9.3E-57 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 Gene3D G3DSA:3.30.1490.20 137 206 2.7E-22 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 Pfam PF02785 Biotin carboxylase C-terminal domain 340 448 9.6E-30 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 Gene3D G3DSA:2.40.50.100 478 552 8.1E-18 T 13-10-2018 P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 Pfam PF00289 Biotin carboxylase, N-terminal domain 10 115 6.3E-39 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 Gene3D G3DSA:3.90.226.10 568 827 8.7E-57 T 13-10-2018 P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 SUPERFAMILY SSF51246 334 453 2.25E-31 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 SUPERFAMILY SSF51230 480 550 4.19E-15 T 13-10-2018 IPR011053 Single hybrid motif P40_10415 3a61b2226dc310b3f241b855aeae08a4 1082 SUPERFAMILY SSF56059 89 329 7.78E-55 T 13-10-2018 P40_05725 817f9f397abb78fcb9ef45878f7dd70d 377 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 1 373 34.205 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB P40_05725 817f9f397abb78fcb9ef45878f7dd70d 377 Gene3D G3DSA:2.130.10.10 11 376 3.5E-96 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_05725 817f9f397abb78fcb9ef45878f7dd70d 377 SUPERFAMILY SSF50998 16 362 1.13E-76 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily P40_05725 817f9f397abb78fcb9ef45878f7dd70d 377 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 2 372 3.7E-126 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB P40_05725 817f9f397abb78fcb9ef45878f7dd70d 377 SMART SM00564 95 127 16.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_05725 817f9f397abb78fcb9ef45878f7dd70d 377 SMART SM00564 181 212 2.1 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_05725 817f9f397abb78fcb9ef45878f7dd70d 377 SMART SM00564 56 87 5.2E-4 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_05725 817f9f397abb78fcb9ef45878f7dd70d 377 SMART SM00564 270 301 1.7 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_05725 817f9f397abb78fcb9ef45878f7dd70d 377 SMART SM00564 136 167 16.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_05725 817f9f397abb78fcb9ef45878f7dd70d 377 SMART SM00564 311 342 0.0027 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_05725 817f9f397abb78fcb9ef45878f7dd70d 377 SMART SM00564 231 263 67.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_05725 817f9f397abb78fcb9ef45878f7dd70d 377 Pfam PF13360 PQQ-like domain 70 300 1.4E-52 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_17805 c843411f9ca701354375f860e3b0e0f8 573 Gene3D G3DSA:3.40.50.970 363 565 3.9E-65 T 13-10-2018 P40_17805 c843411f9ca701354375f860e3b0e0f8 573 SUPERFAMILY SSF52518 371 566 2.68E-68 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold P40_17805 c843411f9ca701354375f860e3b0e0f8 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 568 2.4E-256 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 P40_17805 c843411f9ca701354375f860e3b0e0f8 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 543 5.4E-48 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 P40_17805 c843411f9ca701354375f860e3b0e0f8 573 Gene3D G3DSA:3.40.50.1220 190 361 3.6E-60 T 13-10-2018 P40_17805 c843411f9ca701354375f860e3b0e0f8 573 Gene3D G3DSA:3.40.50.970 1 178 4.3E-74 T 13-10-2018 P40_17805 c843411f9ca701354375f860e3b0e0f8 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 9.3E-45 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 P40_17805 c843411f9ca701354375f860e3b0e0f8 573 SUPERFAMILY SSF52518 3 177 1.67E-65 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold P40_17805 c843411f9ca701354375f860e3b0e0f8 573 SUPERFAMILY SSF52467 189 361 2.12E-63 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily P40_17805 c843411f9ca701354375f860e3b0e0f8 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 165 1.9E-60 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 P40_17050 dc222e7baf3f19a8ebba635e026c9f76 365 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 P40_17050 dc222e7baf3f19a8ebba635e026c9f76 365 SMART SM00937 65 180 1.4E-65 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 P40_17050 dc222e7baf3f19a8ebba635e026c9f76 365 Pfam PF03462 PCRF domain 13 205 2.3E-73 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 P40_17050 dc222e7baf3f19a8ebba635e026c9f76 365 Pfam PF00472 RF-1 domain 216 323 4.3E-42 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 P40_17050 dc222e7baf3f19a8ebba635e026c9f76 365 Gene3D G3DSA:1.20.58.410 2 101 5.6E-8 T 13-10-2018 P40_17050 dc222e7baf3f19a8ebba635e026c9f76 365 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 7.5E-167 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 P40_17050 dc222e7baf3f19a8ebba635e026c9f76 365 Gene3D G3DSA:3.30.70.1660 113 344 2.6E-96 T 13-10-2018 P40_17050 dc222e7baf3f19a8ebba635e026c9f76 365 SUPERFAMILY SSF75620 12 355 3.4E-135 T 13-10-2018 P40_17050 dc222e7baf3f19a8ebba635e026c9f76 365 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.891 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 P40_17050 dc222e7baf3f19a8ebba635e026c9f76 365 Gene3D G3DSA:3.30.160.20 212 299 2.6E-96 T 13-10-2018 P40_15180 6e685103a203cccde5db1039ffd1dfcf 563 Gene3D G3DSA:1.20.140.10 294 463 1.2E-32 T 13-10-2018 P40_15180 6e685103a203cccde5db1039ffd1dfcf 563 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 298 456 3.8E-25 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_15180 6e685103a203cccde5db1039ffd1dfcf 563 SUPERFAMILY SSF56645 78 307 9.42E-35 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_15180 6e685103a203cccde5db1039ffd1dfcf 563 SUPERFAMILY SSF47203 304 459 1.61E-34 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_15180 6e685103a203cccde5db1039ffd1dfcf 563 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 190 286 3.2E-14 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_15180 6e685103a203cccde5db1039ffd1dfcf 563 Gene3D G3DSA:2.40.110.20 140 293 1.1E-57 T 13-10-2018 P40_12800 a028c9ba1b2226a26a584ed9969cfdfd 337 SUPERFAMILY SSF51735 7 159 8.7E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_12800 a028c9ba1b2226a26a584ed9969cfdfd 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 118 6.3E-24 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 P40_12800 a028c9ba1b2226a26a584ed9969cfdfd 337 PIRSF PIRSF000148 4 337 5.2E-88 T 13-10-2018 P40_12800 a028c9ba1b2226a26a584ed9969cfdfd 337 Gene3D G3DSA:3.30.360.10 130 317 2.6E-102 T 13-10-2018 P40_12800 a028c9ba1b2226a26a584ed9969cfdfd 337 Gene3D G3DSA:3.40.50.720 8 331 2.6E-102 T 13-10-2018 P40_12800 a028c9ba1b2226a26a584ed9969cfdfd 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 318 2.7E-24 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 P40_12800 a028c9ba1b2226a26a584ed9969cfdfd 337 SMART SM00859 6 121 2.1E-26 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 P40_12800 a028c9ba1b2226a26a584ed9969cfdfd 337 SUPERFAMILY SSF55347 132 321 5.3E-44 T 13-10-2018 P40_16855 e25c8721c51c7e927d361dd3e8f7b445 394 Pfam PF07690 Major Facilitator Superfamily 31 350 5.4E-21 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_16855 e25c8721c51c7e927d361dd3e8f7b445 394 SUPERFAMILY SSF103473 13 386 4.19E-45 T 13-10-2018 IPR036259 MFS transporter superfamily P40_16855 e25c8721c51c7e927d361dd3e8f7b445 394 Gene3D G3DSA:1.20.1250.20 9 200 6.6E-15 T 13-10-2018 P40_16855 e25c8721c51c7e927d361dd3e8f7b445 394 Gene3D G3DSA:1.20.1250.20 206 390 1.6E-19 T 13-10-2018 P40_04105 939c59e63253b546e1c6894778b57bbe 240 SUPERFAMILY SSF52172 1 170 1.17E-25 T 13-10-2018 IPR011006 CheY-like superfamily P40_04105 939c59e63253b546e1c6894778b57bbe 240 Gene3D G3DSA:3.40.50.2300 1 134 2.6E-24 T 13-10-2018 P40_04105 939c59e63253b546e1c6894778b57bbe 240 Pfam PF00072 Response regulator receiver domain 3 118 1.8E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04105 939c59e63253b546e1c6894778b57bbe 240 SUPERFAMILY SSF46894 140 235 1.25E-25 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_04105 939c59e63253b546e1c6894778b57bbe 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 4.8E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_04105 939c59e63253b546e1c6894778b57bbe 240 SMART SM00862 158 234 2.4E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_04105 939c59e63253b546e1c6894778b57bbe 240 Gene3D G3DSA:1.10.10.10 137 239 5.2E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_04105 939c59e63253b546e1c6894778b57bbe 240 SMART SM00448 1 119 4.3E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_02135 6c86f28feb4cc577912c26f65ac091db 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 187 6.9E-27 T 13-10-2018 P40_02135 6c86f28feb4cc577912c26f65ac091db 220 Gene3D G3DSA:1.20.1440.100 15 88 3.4E-74 T 13-10-2018 P40_02135 6c86f28feb4cc577912c26f65ac091db 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 187 5.0E-38 T 13-10-2018 P40_02135 6c86f28feb4cc577912c26f65ac091db 220 Gene3D G3DSA:3.40.50.1000 3 214 3.4E-74 T 13-10-2018 IPR023214 HAD superfamily P40_02135 6c86f28feb4cc577912c26f65ac091db 220 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 201 1.4E-47 T 13-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like P40_02135 6c86f28feb4cc577912c26f65ac091db 220 SUPERFAMILY SSF56784 1 209 3.39E-35 T 13-10-2018 IPR036412 HAD-like superfamily P40_13820 f98bf40069609414e9d8131e23de37a9 370 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 365 61.959 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 P40_13820 f98bf40069609414e9d8131e23de37a9 370 Gene3D G3DSA:3.40.640.10 49 273 4.0E-119 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_13820 f98bf40069609414e9d8131e23de37a9 370 Pfam PF00155 Aminotransferase class I and II 36 361 2.2E-51 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_13820 f98bf40069609414e9d8131e23de37a9 370 Gene3D G3DSA:3.90.1150.10 26 359 4.0E-119 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_13820 f98bf40069609414e9d8131e23de37a9 370 SUPERFAMILY SSF53383 13 361 1.71E-84 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_13820 f98bf40069609414e9d8131e23de37a9 370 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 13 363 1.2E-111 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 P40_11580 186e71b82c25e9b21a68d79c4c40634c 361 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 316 1.7E-37 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_11580 186e71b82c25e9b21a68d79c4c40634c 361 Gene3D G3DSA:3.40.190.170 32 350 1.1E-66 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_11580 186e71b82c25e9b21a68d79c4c40634c 361 SUPERFAMILY SSF53850 142 272 4.01E-6 T 13-10-2018 P40_11820 87964b8ac5ca07c752ba229724d96c00 326 Gene3D G3DSA:3.90.110.10 155 325 7.1E-66 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 P40_11820 87964b8ac5ca07c752ba229724d96c00 326 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 325 55.701 T 13-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 P40_11820 87964b8ac5ca07c752ba229724d96c00 326 SUPERFAMILY SSF51735 3 155 1.15E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_11820 87964b8ac5ca07c752ba229724d96c00 326 PIRSF PIRSF000102 1 324 7.3E-67 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 P40_11820 87964b8ac5ca07c752ba229724d96c00 326 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 150 5.7E-35 T 13-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_11820 87964b8ac5ca07c752ba229724d96c00 326 SUPERFAMILY SSF56327 156 325 1.36E-64 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 P40_11820 87964b8ac5ca07c752ba229724d96c00 326 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 156 321 7.0E-36 T 13-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 P40_11820 87964b8ac5ca07c752ba229724d96c00 326 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 3 321 5.0E-151 T 13-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 P40_11820 87964b8ac5ca07c752ba229724d96c00 326 Gene3D G3DSA:3.40.50.720 1 154 2.8E-57 T 13-10-2018 P40_11820 87964b8ac5ca07c752ba229724d96c00 326 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 155 167 - T 13-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 P40_03395 2705c397c0b9264aae9880e23fe581a3 143 SMART SM00347 26 126 4.4E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_03395 2705c397c0b9264aae9880e23fe581a3 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 65 99 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site P40_03395 2705c397c0b9264aae9880e23fe581a3 143 Gene3D G3DSA:1.10.10.10 2 143 7.7E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_03395 2705c397c0b9264aae9880e23fe581a3 143 Pfam PF01047 MarR family 37 90 1.4E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_03395 2705c397c0b9264aae9880e23fe581a3 143 SUPERFAMILY SSF46785 8 141 4.48E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_03395 2705c397c0b9264aae9880e23fe581a3 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 1.6E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_03395 2705c397c0b9264aae9880e23fe581a3 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 1.6E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_03395 2705c397c0b9264aae9880e23fe581a3 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 1.6E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_08700 7d048b671c1b33a8e76ccd3db1f29259 386 Gene3D G3DSA:3.30.70.100 259 357 1.3E-13 T 13-10-2018 P40_08700 7d048b671c1b33a8e76ccd3db1f29259 386 SUPERFAMILY SSF82689 261 364 1.83E-16 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 P40_08700 7d048b671c1b33a8e76ccd3db1f29259 386 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 222 256 - T 13-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 P40_08700 7d048b671c1b33a8e76ccd3db1f29259 386 SUPERFAMILY SSF82861 109 189 6.67E-13 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 P40_08700 7d048b671c1b33a8e76ccd3db1f29259 386 SUPERFAMILY SSF50182 190 257 2.58E-16 T 13-10-2018 IPR010920 LSM domain superfamily P40_08700 7d048b671c1b33a8e76ccd3db1f29259 386 Pfam PF00924 Mechanosensitive ion channel 148 353 9.7E-53 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 P40_08700 7d048b671c1b33a8e76ccd3db1f29259 386 Gene3D G3DSA:2.30.30.60 206 256 6.7E-10 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily P40_11235 26d57820866821555a7f3c179bef05b4 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 6.5E-10 T 13-10-2018 P40_11235 26d57820866821555a7f3c179bef05b4 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 6.5E-10 T 13-10-2018 P40_11235 26d57820866821555a7f3c179bef05b4 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 6.5E-10 T 13-10-2018 P40_11235 26d57820866821555a7f3c179bef05b4 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 132 158 6.5E-10 T 13-10-2018 P40_11235 26d57820866821555a7f3c179bef05b4 221 Gene3D G3DSA:3.30.1330.60 79 221 4.7E-50 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_11235 26d57820866821555a7f3c179bef05b4 221 Pfam PF00691 OmpA family 115 210 1.6E-23 T 13-10-2018 IPR006665 OmpA-like domain P40_11235 26d57820866821555a7f3c179bef05b4 221 SUPERFAMILY SSF103088 103 218 4.58E-38 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_11235 26d57820866821555a7f3c179bef05b4 221 PRINTS PR01021 OMPA domain signature 116 138 3.0E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_11235 26d57820866821555a7f3c179bef05b4 221 PRINTS PR01021 OMPA domain signature 146 161 3.0E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_11235 26d57820866821555a7f3c179bef05b4 221 PRINTS PR01021 OMPA domain signature 161 177 3.0E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_11235 26d57820866821555a7f3c179bef05b4 221 ProSitePatterns PS01068 OmpA-like domain. 148 192 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 P40_11235 26d57820866821555a7f3c179bef05b4 221 Pfam PF13488 Glycine zipper 37 85 2.5E-10 T 13-10-2018 IPR039567 Glycine zipper domain P40_15460 ef05bdb169926cf08a9ee703681e4b1b 142 Pfam PF01047 MarR family 32 91 3.7E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_15460 ef05bdb169926cf08a9ee703681e4b1b 142 Gene3D G3DSA:1.10.10.10 1 142 4.6E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_15460 ef05bdb169926cf08a9ee703681e4b1b 142 SMART SM00347 25 127 1.0E-23 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_15460 ef05bdb169926cf08a9ee703681e4b1b 142 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site P40_15460 ef05bdb169926cf08a9ee703681e4b1b 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 5.9E-6 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_15460 ef05bdb169926cf08a9ee703681e4b1b 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 5.9E-6 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_15460 ef05bdb169926cf08a9ee703681e4b1b 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 5.9E-6 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_15460 ef05bdb169926cf08a9ee703681e4b1b 142 SUPERFAMILY SSF46785 7 140 6.59E-28 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_15460 ef05bdb169926cf08a9ee703681e4b1b 142 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 7 137 6.5E-49 T 13-10-2018 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 P40_13695 aa0e26f455419ae9646b3f1741c5b319 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.7E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13695 aa0e26f455419ae9646b3f1741c5b319 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 8.7E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13695 aa0e26f455419ae9646b3f1741c5b319 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 8.7E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13695 aa0e26f455419ae9646b3f1741c5b319 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.7E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13695 aa0e26f455419ae9646b3f1741c5b319 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 8.7E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13695 aa0e26f455419ae9646b3f1741c5b319 253 SUPERFAMILY SSF51735 4 250 5.35E-56 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_13695 aa0e26f455419ae9646b3f1741c5b319 253 Pfam PF00106 short chain dehydrogenase 3 193 2.1E-47 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13695 aa0e26f455419ae9646b3f1741c5b319 253 Gene3D G3DSA:3.40.50.720 2 237 2.5E-58 T 13-10-2018 P40_13695 aa0e26f455419ae9646b3f1741c5b319 253 PIRSF PIRSF000126 1 253 5.7E-66 T 13-10-2018 P40_13695 aa0e26f455419ae9646b3f1741c5b319 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 237 0.0012 T 13-10-2018 P40_06970 d493389d57575c1a708a1c48a5acf64e 529 Pfam PF00005 ABC transporter 336 466 4.0E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_06970 d493389d57575c1a708a1c48a5acf64e 529 SMART SM00382 26 238 2.0E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_06970 d493389d57575c1a708a1c48a5acf64e 529 SMART SM00382 343 510 2.3E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_06970 d493389d57575c1a708a1c48a5acf64e 529 Gene3D G3DSA:3.40.50.300 3 279 8.7E-58 T 13-10-2018 P40_06970 d493389d57575c1a708a1c48a5acf64e 529 SUPERFAMILY SSF52540 4 239 2.03E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_06970 d493389d57575c1a708a1c48a5acf64e 529 Gene3D G3DSA:3.40.50.300 282 527 7.3E-52 T 13-10-2018 P40_06970 d493389d57575c1a708a1c48a5acf64e 529 SUPERFAMILY SSF52540 296 522 5.03E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_06970 d493389d57575c1a708a1c48a5acf64e 529 Pfam PF12848 ABC transporter 224 307 7.4E-22 T 13-10-2018 IPR032781 ABC-transporter extension domain P40_06970 d493389d57575c1a708a1c48a5acf64e 529 Pfam PF00005 ABC transporter 18 184 6.6E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_07190 128eeb648652d0ed96441e6948c4a521 342 Pfam PF13609 Gram-negative porin 9 319 1.0E-30 T 13-10-2018 P40_07190 128eeb648652d0ed96441e6948c4a521 342 SUPERFAMILY SSF56935 26 342 3.36E-48 T 13-10-2018 P40_07190 128eeb648652d0ed96441e6948c4a521 342 Gene3D G3DSA:2.40.160.10 19 342 2.4E-55 T 13-10-2018 IPR023614 Porin domain superfamily P40_14945 4fef59a074725d8719d43a019c4d547c 100 Pfam PF00216 Bacterial DNA-binding protein 4 92 2.1E-30 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_14945 4fef59a074725d8719d43a019c4d547c 100 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 1.3E-16 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_14945 4fef59a074725d8719d43a019c4d547c 100 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 1.3E-16 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_14945 4fef59a074725d8719d43a019c4d547c 100 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 1.3E-16 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_14945 4fef59a074725d8719d43a019c4d547c 100 SMART SM00411 4 93 9.4E-39 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_14945 4fef59a074725d8719d43a019c4d547c 100 SUPERFAMILY SSF47729 4 95 1.09E-30 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 P40_14945 4fef59a074725d8719d43a019c4d547c 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 P40_14945 4fef59a074725d8719d43a019c4d547c 100 Gene3D G3DSA:4.10.520.10 2 98 1.3E-35 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 P40_14945 4fef59a074725d8719d43a019c4d547c 100 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 97 6.9E-49 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 P40_14945 4fef59a074725d8719d43a019c4d547c 100 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 29.905 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 P40_13235 75b348d3fe48cc571ea73c55fbe8cecc 321 SUPERFAMILY SSF55174 24 75 9.94E-10 T 13-10-2018 P40_13235 75b348d3fe48cc571ea73c55fbe8cecc 321 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 22 316 1.4E-75 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_13235 75b348d3fe48cc571ea73c55fbe8cecc 321 SUPERFAMILY SSF55120 92 316 5.76E-61 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_13235 75b348d3fe48cc571ea73c55fbe8cecc 321 Gene3D G3DSA:3.30.2350.10 97 319 2.9E-72 T 13-10-2018 P40_13235 75b348d3fe48cc571ea73c55fbe8cecc 321 Gene3D G3DSA:3.10.290.10 14 79 2.9E-17 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 P40_13235 75b348d3fe48cc571ea73c55fbe8cecc 321 SMART SM00363 25 84 2.9E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_13235 75b348d3fe48cc571ea73c55fbe8cecc 321 Pfam PF01479 S4 domain 25 71 5.5E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_13235 75b348d3fe48cc571ea73c55fbe8cecc 321 Pfam PF00849 RNA pseudouridylate synthase 105 251 5.0E-30 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_13235 75b348d3fe48cc571ea73c55fbe8cecc 321 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 144 158 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_04820 8fd83c77369d77aec54cc99d8afe4138 522 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 5 522 45.511 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P40_04820 8fd83c77369d77aec54cc99d8afe4138 522 Gene3D G3DSA:3.40.50.1380 3 195 1.2E-83 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily P40_04820 8fd83c77369d77aec54cc99d8afe4138 522 Gene3D G3DSA:3.40.140.20 386 522 1.8E-60 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P40_04820 8fd83c77369d77aec54cc99d8afe4138 522 SUPERFAMILY SSF52335 6 195 3.53E-69 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily P40_04820 8fd83c77369d77aec54cc99d8afe4138 522 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 453 9.4E-118 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P40_04820 8fd83c77369d77aec54cc99d8afe4138 522 SMART SM00798 135 454 1.6E-210 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P40_04820 8fd83c77369d77aec54cc99d8afe4138 522 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 7 522 9.7E-239 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P40_04820 8fd83c77369d77aec54cc99d8afe4138 522 Gene3D G3DSA:3.40.140.20 209 363 4.2E-56 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P40_04820 8fd83c77369d77aec54cc99d8afe4138 522 SUPERFAMILY SSF53927 212 522 1.4E-129 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 P40_04820 8fd83c77369d77aec54cc99d8afe4138 522 PIRSF PIRSF000414 1 522 3.1E-223 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P40_04820 8fd83c77369d77aec54cc99d8afe4138 522 Pfam PF02142 MGS-like domain 17 130 8.8E-29 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain P40_04820 8fd83c77369d77aec54cc99d8afe4138 522 SMART SM00851 17 130 3.3E-61 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain P40_20015 14dacdba063594f891f1bfaf8c0b978d 299 Pfam PF03466 LysR substrate binding domain 85 281 3.0E-41 T 13-10-2018 IPR005119 LysR, substrate-binding P40_20015 14dacdba063594f891f1bfaf8c0b978d 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 60 2.8E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20015 14dacdba063594f891f1bfaf8c0b978d 299 Gene3D G3DSA:1.10.10.10 1 81 2.1E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_20015 14dacdba063594f891f1bfaf8c0b978d 299 SUPERFAMILY SSF46785 3 108 9.4E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_20015 14dacdba063594f891f1bfaf8c0b978d 299 SUPERFAMILY SSF53850 84 281 3.26E-39 T 13-10-2018 P40_20015 14dacdba063594f891f1bfaf8c0b978d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.6E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20015 14dacdba063594f891f1bfaf8c0b978d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.6E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20015 14dacdba063594f891f1bfaf8c0b978d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.6E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20015 14dacdba063594f891f1bfaf8c0b978d 299 Gene3D G3DSA:3.40.190.290 88 282 8.2E-38 T 13-10-2018 P40_16160 d34d9f647b0b4d50fa60b88cd5c8f2cd 149 Gene3D G3DSA:1.20.58.300 1 124 1.1E-19 T 13-10-2018 P40_16160 d34d9f647b0b4d50fa60b88cd5c8f2cd 149 SUPERFAMILY SSF140566 3 124 1.96E-18 T 13-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 P40_16160 d34d9f647b0b4d50fa60b88cd5c8f2cd 149 Pfam PF05130 FlgN protein 2 137 1.2E-23 T 13-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 P40_14815 0799da9c4fafa30f73adfbf42e7c7ec2 222 SUPERFAMILY SSF52172 1 118 1.57E-35 T 13-10-2018 IPR011006 CheY-like superfamily P40_14815 0799da9c4fafa30f73adfbf42e7c7ec2 222 SUPERFAMILY SSF46894 125 218 1.7E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_14815 0799da9c4fafa30f73adfbf42e7c7ec2 222 SMART SM00448 1 112 1.0E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_14815 0799da9c4fafa30f73adfbf42e7c7ec2 222 SMART SM00862 146 217 2.6E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_14815 0799da9c4fafa30f73adfbf42e7c7ec2 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 217 9.7E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_14815 0799da9c4fafa30f73adfbf42e7c7ec2 222 Gene3D G3DSA:3.40.50.2300 1 121 6.0E-39 T 13-10-2018 P40_14815 0799da9c4fafa30f73adfbf42e7c7ec2 222 Gene3D G3DSA:1.10.10.10 122 222 3.9E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14815 0799da9c4fafa30f73adfbf42e7c7ec2 222 Pfam PF00072 Response regulator receiver domain 4 112 7.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_20850 b3f67f98b19bfc3d1020212d0ab6b8b3 708 PIRSF PIRSF036354 2 708 0.0 T 13-10-2018 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 P40_20850 b3f67f98b19bfc3d1020212d0ab6b8b3 708 Pfam PF12801 4Fe-4S binding domain 484 530 7.1E-14 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain P40_20850 b3f67f98b19bfc3d1020212d0ab6b8b3 708 Pfam PF12801 4Fe-4S binding domain 585 630 6.9E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain P40_20850 b3f67f98b19bfc3d1020212d0ab6b8b3 708 Pfam PF04205 FMN-binding domain 80 164 4.9E-6 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 P40_20850 b3f67f98b19bfc3d1020212d0ab6b8b3 708 SUPERFAMILY SSF54862 505 668 9.96E-7 T 13-10-2018 P40_20850 b3f67f98b19bfc3d1020212d0ab6b8b3 708 SMART SM00900 77 170 5.3E-13 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 P40_12665 8e4bb4f5c97388031b54801483af3470 415 Gene3D G3DSA:3.40.50.2300 53 372 4.3E-73 T 13-10-2018 P40_12665 8e4bb4f5c97388031b54801483af3470 415 SUPERFAMILY SSF53822 31 386 4.37E-69 T 13-10-2018 IPR028082 Periplasmic binding protein-like I P40_12665 8e4bb4f5c97388031b54801483af3470 415 Pfam PF13458 Periplasmic binding protein 31 376 5.8E-61 T 13-10-2018 IPR028081 Leucine-binding protein domain P40_12665 8e4bb4f5c97388031b54801483af3470 415 Gene3D G3DSA:3.40.50.2300 150 381 4.3E-73 T 13-10-2018 P40_12665 8e4bb4f5c97388031b54801483af3470 415 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 94 104 2.8E-5 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_12665 8e4bb4f5c97388031b54801483af3470 415 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 32 48 2.8E-5 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_12665 8e4bb4f5c97388031b54801483af3470 415 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 349 364 2.8E-5 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_12665 8e4bb4f5c97388031b54801483af3470 415 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 54 70 2.8E-5 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_15150 dcf61af6ecd64009a070ef230b9b87f6 591 Pfam PF07244 Surface antigen variable number repeat 129 205 3.8E-5 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 P40_15150 dcf61af6ecd64009a070ef230b9b87f6 591 Gene3D G3DSA:3.10.20.310 208 283 3.7E-11 T 13-10-2018 P40_15150 dcf61af6ecd64009a070ef230b9b87f6 591 Pfam PF17243 POTRA domain TamA domain 1 40 118 1.5E-13 T 13-10-2018 IPR035243 TamA, POTRA domain 1 P40_15150 dcf61af6ecd64009a070ef230b9b87f6 591 Gene3D G3DSA:2.40.160.50 285 591 2.2E-93 T 13-10-2018 P40_15150 dcf61af6ecd64009a070ef230b9b87f6 591 Pfam PF01103 Surface antigen 272 575 2.5E-34 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 P40_15150 dcf61af6ecd64009a070ef230b9b87f6 591 Gene3D G3DSA:3.10.20.310 121 207 5.2E-19 T 13-10-2018 P40_05545 63fb737504baa98c51c18bc879c32824 271 Gene3D G3DSA:1.10.3720.10 67 262 1.5E-19 T 13-10-2018 IPR035906 MetI-like superfamily P40_05545 63fb737504baa98c51c18bc879c32824 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 257 6.1E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_05545 63fb737504baa98c51c18bc879c32824 271 SUPERFAMILY SSF161098 71 257 4.45E-27 T 13-10-2018 IPR035906 MetI-like superfamily P40_01875 a9028f82d1dffcd824b73b730f0434aa 199 Gene3D G3DSA:1.10.10.2280 52 198 1.4E-41 T 13-10-2018 P40_13480 b2781b9afd90e0d7accc637186b54565 426 Pfam PF06742 Protein of unknown function (DUF1214) 298 410 9.5E-30 T 13-10-2018 IPR010621 Domain of unknown function DUF1214 P40_13480 b2781b9afd90e0d7accc637186b54565 426 Gene3D G3DSA:2.60.120.600 246 426 8.3E-40 T 13-10-2018 IPR037049 Domain of unknown function DUF1214, C-terminal domain superfamily P40_13480 b2781b9afd90e0d7accc637186b54565 426 Gene3D G3DSA:2.60.40.1610 42 184 2.5E-19 T 13-10-2018 IPR037050 Domain of unknown function DUF1254 superfamily P40_13480 b2781b9afd90e0d7accc637186b54565 426 Pfam PF06863 Protein of unknown function (DUF1254) 43 168 2.2E-43 T 13-10-2018 IPR010679 Domain of unknown function DUF1254 P40_13480 b2781b9afd90e0d7accc637186b54565 426 Gene3D G3DSA:1.10.3360.10 17 237 2.5E-19 T 13-10-2018 IPR023289 VPA0735-like domain superfamily P40_13480 b2781b9afd90e0d7accc637186b54565 426 SUPERFAMILY SSF160935 8 425 3.01E-113 T 13-10-2018 P40_03985 00dbb0a6a089b3dd7dcc43f529f6a220 306 Pfam PF07848 PaaX-like protein 20 88 4.6E-28 T 13-10-2018 IPR012906 PaaX-like, N-terminal P40_03985 00dbb0a6a089b3dd7dcc43f529f6a220 306 PIRSF PIRSF020623 3 306 1.4E-112 T 13-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 P40_03985 00dbb0a6a089b3dd7dcc43f529f6a220 306 Gene3D G3DSA:1.20.58.1460 225 289 1.1E-5 T 13-10-2018 P40_03985 00dbb0a6a089b3dd7dcc43f529f6a220 306 SUPERFAMILY SSF46785 47 113 2.45E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_03985 00dbb0a6a089b3dd7dcc43f529f6a220 306 Pfam PF08223 PaaX-like protein C-terminal domain 186 281 2.5E-34 T 13-10-2018 IPR013225 PaaX-like, C-terminal P40_03985 00dbb0a6a089b3dd7dcc43f529f6a220 306 Gene3D G3DSA:1.10.10.10 19 102 8.0E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_03985 00dbb0a6a089b3dd7dcc43f529f6a220 306 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 23 303 4.3E-95 T 13-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 P40_14620 1121af7cf9f075c3db7bd8a2f0f00a0a 863 TIGRFAM TIGR02687 TIGR02687: TIGR02687 family protein 8 853 2.3E-229 T 13-10-2018 IPR014060 Conserved hypothetical protein CHP02687 P40_14620 1121af7cf9f075c3db7bd8a2f0f00a0a 863 Pfam PF08665 PglZ domain 475 647 8.6E-57 T 13-10-2018 IPR013973 PglZ domain P40_12180 68548724b2ff07126b437faac5a2579c 540 Gene3D G3DSA:2.40.420.20 364 460 1.2E-21 T 13-10-2018 P40_12180 68548724b2ff07126b437faac5a2579c 540 Pfam PF11604 Copper binding periplasmic protein CusF 468 530 9.4E-16 T 13-10-2018 IPR021647 Copper binding periplasmic protein CusF P40_12180 68548724b2ff07126b437faac5a2579c 540 Gene3D G3DSA:2.40.50.320 461 540 2.6E-18 T 13-10-2018 P40_12180 68548724b2ff07126b437faac5a2579c 540 Gene3D G3DSA:2.40.30.170 266 363 1.4E-25 T 13-10-2018 P40_12180 68548724b2ff07126b437faac5a2579c 540 Gene3D G3DSA:2.40.50.100 163 197 7.1E-7 T 13-10-2018 P40_12180 68548724b2ff07126b437faac5a2579c 540 Gene3D G3DSA:2.40.420.20 137 148 7.1E-7 T 13-10-2018 P40_12180 68548724b2ff07126b437faac5a2579c 540 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 139 432 5.9E-39 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 P40_12180 68548724b2ff07126b437faac5a2579c 540 Gene3D G3DSA:1.10.287.470 198 209 7.1E-7 T 13-10-2018 P40_12180 68548724b2ff07126b437faac5a2579c 540 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 146 357 4.5E-70 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain P40_12180 68548724b2ff07126b437faac5a2579c 540 Gene3D G3DSA:2.40.30.170 149 162 7.1E-7 T 13-10-2018 P40_12180 68548724b2ff07126b437faac5a2579c 540 SUPERFAMILY SSF111369 161 361 5.1E-19 T 13-10-2018 P40_06850 a6c09a53f403b3259fe4f5c539a4f185 255 Pfam PF00990 Diguanylate cyclase, GGDEF domain 97 249 1.4E-32 T 13-10-2018 IPR000160 GGDEF domain P40_06850 a6c09a53f403b3259fe4f5c539a4f185 255 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 90 250 9.2E-34 T 13-10-2018 IPR000160 GGDEF domain P40_06850 a6c09a53f403b3259fe4f5c539a4f185 255 SMART SM00267 83 254 4.1E-29 T 13-10-2018 IPR000160 GGDEF domain P40_06850 a6c09a53f403b3259fe4f5c539a4f185 255 SUPERFAMILY SSF55073 99 250 2.09E-33 T 13-10-2018 IPR029787 Nucleotide cyclase P40_06850 a6c09a53f403b3259fe4f5c539a4f185 255 Gene3D G3DSA:3.30.70.270 80 252 8.6E-38 T 13-10-2018 P40_15610 b7b5230728a157f52974fe680d9566c8 443 Pfam PF01979 Amidohydrolase family 1 382 1.7E-33 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P40_15610 b7b5230728a157f52974fe680d9566c8 443 SUPERFAMILY SSF51556 4 324 1.45E-50 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_15610 b7b5230728a157f52974fe680d9566c8 443 SUPERFAMILY SSF51338 332 408 1.3E-10 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_15610 b7b5230728a157f52974fe680d9566c8 443 Gene3D G3DSA:2.30.40.10 321 412 1.2E-5 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_15610 b7b5230728a157f52974fe680d9566c8 443 Gene3D G3DSA:3.20.20.140 7 320 3.0E-62 T 13-10-2018 P40_19255 958b4ef73878a290753297e8cd06c220 384 Pfam PF00155 Aminotransferase class I and II 38 377 3.5E-57 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_19255 958b4ef73878a290753297e8cd06c220 384 Gene3D G3DSA:3.90.1150.10 38 375 3.2E-133 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_19255 958b4ef73878a290753297e8cd06c220 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 1 382 51.05 T 13-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 P40_19255 958b4ef73878a290753297e8cd06c220 384 SUPERFAMILY SSF53383 5 382 3.19E-110 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_19255 958b4ef73878a290753297e8cd06c220 384 Gene3D G3DSA:3.40.640.10 55 284 3.2E-133 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_19255 958b4ef73878a290753297e8cd06c220 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 P40_19255 958b4ef73878a290753297e8cd06c220 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 18 378 5.4E-142 T 13-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 P40_06765 6a97e32e05976a6cd56386d0d990bf4d 373 Pfam PF00487 Fatty acid desaturase 78 344 7.2E-33 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 P40_02280 31f5b215388eb936f013fa2656d77e6b 533 Pfam PF00501 AMP-binding enzyme 26 432 1.4E-100 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_02280 31f5b215388eb936f013fa2656d77e6b 533 Gene3D G3DSA:3.40.50.12780 13 425 4.1E-113 T 13-10-2018 P40_02280 31f5b215388eb936f013fa2656d77e6b 533 Pfam PF13193 AMP-binding enzyme C-terminal domain 441 516 7.4E-21 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_02280 31f5b215388eb936f013fa2656d77e6b 533 SUPERFAMILY SSF56801 18 528 6.54E-150 T 13-10-2018 P40_02280 31f5b215388eb936f013fa2656d77e6b 533 Gene3D G3DSA:3.30.300.310 428 532 7.1E-34 T 13-10-2018 P40_18195 cf5c6dd2a8c3218438bb2aa8e7ffca67 179 PIRSF PIRSF002161 1 179 6.6E-64 T 13-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18195 cf5c6dd2a8c3218438bb2aa8e7ffca67 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 13-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18195 cf5c6dd2a8c3218438bb2aa8e7ffca67 179 Gene3D G3DSA:3.30.1440.10 1 178 6.3E-79 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18195 cf5c6dd2a8c3218438bb2aa8e7ffca67 179 Pfam PF00673 ribosomal L5P family C-terminus 84 176 4.5E-40 T 13-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18195 cf5c6dd2a8c3218438bb2aa8e7ffca67 179 Pfam PF00281 Ribosomal protein L5 24 80 1.8E-27 T 13-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18195 cf5c6dd2a8c3218438bb2aa8e7ffca67 179 SUPERFAMILY SSF55282 4 178 6.36E-78 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18195 cf5c6dd2a8c3218438bb2aa8e7ffca67 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.408 T 13-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_14025 6e917b0fdddd7e7e808e0775ff0b9460 174 Pfam PF11736 Protein of unknown function (DUF3299) 25 167 1.1E-40 T 13-10-2018 IPR021727 Protein of unknown function DUF3299 P40_14025 6e917b0fdddd7e7e808e0775ff0b9460 174 Gene3D G3DSA:2.40.50.870 18 171 8.4E-47 T 13-10-2018 P40_20715 5e1cc7abd8e02dda9b581c3cbc7889a8 289 Gene3D G3DSA:3.90.226.10 1 210 5.4E-64 T 13-10-2018 P40_20715 5e1cc7abd8e02dda9b581c3cbc7889a8 289 Gene3D G3DSA:1.10.12.10 214 271 1.4E-7 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_20715 5e1cc7abd8e02dda9b581c3cbc7889a8 289 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 270 4.6E-51 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_20715 5e1cc7abd8e02dda9b581c3cbc7889a8 289 SUPERFAMILY SSF52096 1 270 3.82E-72 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_17105 b72523e2ef345fb2e5eb90207fb288ac 206 Pfam PF12804 MobA-like NTP transferase domain 10 173 3.1E-35 T 13-10-2018 IPR025877 MobA-like NTP transferase P40_17105 b72523e2ef345fb2e5eb90207fb288ac 206 Gene3D G3DSA:3.90.550.10 5 201 2.3E-46 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_17105 b72523e2ef345fb2e5eb90207fb288ac 206 SUPERFAMILY SSF53448 8 204 1.35E-24 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_08980 0c8d4c8ad23f92b26d7e33a93fb465f4 823 SUPERFAMILY SSF63825 62 348 1.41E-21 T 13-10-2018 P40_08980 0c8d4c8ad23f92b26d7e33a93fb465f4 823 SUPERFAMILY SSF101898 473 818 9.15E-13 T 13-10-2018 P40_08980 0c8d4c8ad23f92b26d7e33a93fb465f4 823 Gene3D G3DSA:2.120.10.30 667 760 1.9E-5 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_08980 0c8d4c8ad23f92b26d7e33a93fb465f4 823 Gene3D G3DSA:2.120.10.30 413 631 2.1E-9 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_08980 0c8d4c8ad23f92b26d7e33a93fb465f4 823 Gene3D G3DSA:2.120.10.30 237 412 2.5E-13 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_08980 0c8d4c8ad23f92b26d7e33a93fb465f4 823 Gene3D G3DSA:2.120.10.30 22 231 1.5E-10 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_00260 2928fa655fc4eb687c8434196a64945f 557 SUPERFAMILY SSF75304 39 551 5.23E-100 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_00260 2928fa655fc4eb687c8434196a64945f 557 Pfam PF01425 Amidase 61 534 1.2E-79 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_00260 2928fa655fc4eb687c8434196a64945f 557 Gene3D G3DSA:3.90.1300.10 34 556 1.5E-132 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_00260 2928fa655fc4eb687c8434196a64945f 557 ProSitePatterns PS00571 Amidases signature. 193 224 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 P40_04395 63914f97b2619871703904fb13a9d0d2 630 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 198 349 2.9E-16 T 13-10-2018 P40_04395 63914f97b2619871703904fb13a9d0d2 630 Pfam PF10102 Domain of unknown function (DUF2341) 72 155 3.9E-22 T 13-10-2018 IPR018765 Domain of unknown function DUF2341 P40_04395 63914f97b2619871703904fb13a9d0d2 630 Gene3D G3DSA:2.60.120.200 140 361 6.8E-24 T 13-10-2018 P40_04395 63914f97b2619871703904fb13a9d0d2 630 Pfam PF01618 MotA/TolQ/ExbB proton channel family 481 589 2.0E-28 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel P40_04395 63914f97b2619871703904fb13a9d0d2 630 SMART SM00560 203 352 0.0018 T 13-10-2018 IPR006558 LamG-like jellyroll fold P40_04395 63914f97b2619871703904fb13a9d0d2 630 SUPERFAMILY SSF49899 136 359 1.21E-27 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily P40_00485 903c83ea9e31e4d862cb607ee44ad98a 386 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 324 5.5E-22 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_00485 903c83ea9e31e4d862cb607ee44ad98a 386 Gene3D G3DSA:3.40.190.170 28 352 3.4E-62 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_12305 ce429cc2471cf251a6264fdad99a1262 243 Pfam PF01797 Transposase IS200 like 17 122 1.5E-6 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 P40_12305 ce429cc2471cf251a6264fdad99a1262 243 SMART SM01321 9 124 1.5E-14 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 P40_12305 ce429cc2471cf251a6264fdad99a1262 243 SUPERFAMILY SSF143422 6 124 5.76E-15 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 P40_12305 ce429cc2471cf251a6264fdad99a1262 243 Gene3D G3DSA:3.30.70.1290 1 165 2.1E-23 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 308 813 1.0E-86 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 Gene3D G3DSA:3.30.70.100 2 74 6.5E-16 T 13-10-2018 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 Gene3D G3DSA:2.70.150.20 323 440 1.3E-40 T 13-10-2018 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 Gene3D G3DSA:3.40.50.1000 519 788 5.8E-93 T 13-10-2018 IPR023214 HAD superfamily P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 9 70 5.8E-10 T 13-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 Gene3D G3DSA:3.30.70.100 117 180 4.5E-18 T 13-10-2018 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 SUPERFAMILY SSF56784 536 842 7.66E-57 T 13-10-2018 IPR036412 HAD-like superfamily P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 Pfam PF00122 E1-E2 ATPase 338 517 3.6E-55 T 13-10-2018 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 SUPERFAMILY SSF55008 111 182 2.88E-17 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 ProSitePatterns PS01047 Heavy-metal-associated domain. 13 42 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 Pfam PF00403 Heavy-metal-associated domain 119 174 5.9E-13 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 Pfam PF00403 Heavy-metal-associated domain 10 67 1.2E-13 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 SUPERFAMILY SSF55008 5 70 1.14E-15 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 Gene3D G3DSA:3.40.1110.10 549 668 5.8E-93 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 540 546 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 SUPERFAMILY SSF81665 199 821 2.35E-11 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 Pfam PF00702 haloacid dehalogenase-like hydrolase 535 750 4.7E-49 T 13-10-2018 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 251 846 2.6E-185 T 13-10-2018 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 SUPERFAMILY SSF81653 340 436 2.09E-27 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 736 752 7.4E-9 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 767 792 7.4E-9 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 582 600 7.4E-9 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 759 771 4.4E-28 T 13-10-2018 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 552 4.4E-28 T 13-10-2018 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 683 693 4.4E-28 T 13-10-2018 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 386 400 4.4E-28 T 13-10-2018 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 661 672 4.4E-28 T 13-10-2018 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 736 755 4.4E-28 T 13-10-2018 P40_02120 20a6e2faab5c2e5e871b46764b4af2f9 864 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 269 845 1.4E-189 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 P40_08145 124b4e4681c79fd7325674682c6574e5 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 271 2.2E-104 T 13-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 P40_08145 124b4e4681c79fd7325674682c6574e5 297 Pfam PF00483 Nucleotidyl transferase 7 274 8.6E-25 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 P40_08145 124b4e4681c79fd7325674682c6574e5 297 Gene3D G3DSA:3.90.550.10 1 297 6.7E-81 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_08145 124b4e4681c79fd7325674682c6574e5 297 SUPERFAMILY SSF53448 6 283 2.25E-59 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_17120 f5c644b21fa13a2dbfd551c65caee7f1 156 SUPERFAMILY SSF54292 3 77 3.54E-26 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 P40_17120 f5c644b21fa13a2dbfd551c65caee7f1 156 Gene3D G3DSA:3.10.20.30 2 75 3.6E-26 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_17120 f5c644b21fa13a2dbfd551c65caee7f1 156 SUPERFAMILY SSF47741 83 151 3.27E-29 T 13-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily P40_17120 f5c644b21fa13a2dbfd551c65caee7f1 156 Gene3D G3DSA:1.10.150.120 77 155 1.2E-24 T 13-10-2018 P40_17120 f5c644b21fa13a2dbfd551c65caee7f1 156 Pfam PF01799 [2Fe-2S] binding domain 72 144 1.2E-26 T 13-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 P40_17120 f5c644b21fa13a2dbfd551c65caee7f1 156 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 P40_17120 f5c644b21fa13a2dbfd551c65caee7f1 156 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 62 6.3E-8 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 P40_13500 3ad85d42ae93210de2792bdb2cb353ee 634 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 11 617 6.0E-153 T 13-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ P40_13500 3ad85d42ae93210de2792bdb2cb353ee 634 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 111 545 5.1E-76 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_04350 9ba72e47042dc1017e515f1e8b1c5e56 447 SUPERFAMILY SSF51690 142 443 4.71E-92 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 P40_04350 9ba72e47042dc1017e515f1e8b1c5e56 447 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 13 433 3.2E-136 T 13-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 P40_04350 9ba72e47042dc1017e515f1e8b1c5e56 447 SUPERFAMILY SSF54675 9 139 4.12E-39 T 13-10-2018 P40_04350 9ba72e47042dc1017e515f1e8b1c5e56 447 Gene3D G3DSA:3.20.20.70 153 317 9.1E-123 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_04350 9ba72e47042dc1017e515f1e8b1c5e56 447 Gene3D G3DSA:3.20.140.10 377 447 6.6E-6 T 13-10-2018 P40_04350 9ba72e47042dc1017e515f1e8b1c5e56 447 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 157 354 1.2E-11 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 P40_04350 9ba72e47042dc1017e515f1e8b1c5e56 447 Gene3D G3DSA:3.20.140.10 13 376 9.1E-123 T 13-10-2018 P40_04350 9ba72e47042dc1017e515f1e8b1c5e56 447 PIRSF PIRSF000484 7 447 7.7E-120 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 P40_02055 b58460494881d063d7a12a824fd2ed76 169 Gene3D G3DSA:3.30.160.70 3 76 1.2E-15 T 13-10-2018 P40_02055 b58460494881d063d7a12a824fd2ed76 169 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 77 1.6E-5 T 13-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 P40_02055 b58460494881d063d7a12a824fd2ed76 169 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 82 160 1.8E-32 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 P40_02055 b58460494881d063d7a12a824fd2ed76 169 SUPERFAMILY SSF46767 81 161 1.1E-29 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 P40_02055 b58460494881d063d7a12a824fd2ed76 169 Gene3D G3DSA:1.10.10.10 79 162 5.3E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_02055 b58460494881d063d7a12a824fd2ed76 169 SUPERFAMILY SSF53155 6 85 1.41E-13 T 13-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 P40_02055 b58460494881d063d7a12a824fd2ed76 169 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 83 161 9.9E-31 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 P40_02055 b58460494881d063d7a12a824fd2ed76 169 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 161 36.835 T 13-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 P40_02055 b58460494881d063d7a12a824fd2ed76 169 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 131 137 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 P40_10985 521f2df8f5779477e4ce8b3a75f0efcb 237 Gene3D G3DSA:1.10.10.10 152 229 4.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_10985 521f2df8f5779477e4ce8b3a75f0efcb 237 Pfam PF13545 Crp-like helix-turn-helix domain 156 227 9.4E-18 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 P40_10985 521f2df8f5779477e4ce8b3a75f0efcb 237 ProSitePatterns PS00042 Crp-type HTH domain signature. 182 205 - T 13-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 P40_10985 521f2df8f5779477e4ce8b3a75f0efcb 237 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 180 196 2.3E-10 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 P40_10985 521f2df8f5779477e4ce8b3a75f0efcb 237 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 196 211 2.3E-10 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 P40_10985 521f2df8f5779477e4ce8b3a75f0efcb 237 SUPERFAMILY SSF51206 10 149 1.06E-26 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like P40_10985 521f2df8f5779477e4ce8b3a75f0efcb 237 Gene3D G3DSA:2.60.120.10 30 151 3.9E-43 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_10985 521f2df8f5779477e4ce8b3a75f0efcb 237 SMART SM00100 17 138 1.9E-16 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_10985 521f2df8f5779477e4ce8b3a75f0efcb 237 Pfam PF00027 Cyclic nucleotide-binding domain 37 121 2.4E-13 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_10985 521f2df8f5779477e4ce8b3a75f0efcb 237 SMART SM00419 174 222 1.9E-13 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 P40_10985 521f2df8f5779477e4ce8b3a75f0efcb 237 SUPERFAMILY SSF46785 152 227 1.73E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_09305 f364161a6e9e686edaf8541a93cdc1fb 142 SUPERFAMILY SSF55961 13 139 5.08E-17 T 13-10-2018 P40_09305 f364161a6e9e686edaf8541a93cdc1fb 142 Gene3D G3DSA:3.30.530.20 5 141 1.5E-16 T 13-10-2018 IPR023393 START-like domain superfamily P40_20770 18fe509f965e65440efe4e792867f373 1029 Gene3D G3DSA:1.20.1640.10 504 1006 3.0E-283 T 13-10-2018 P40_20770 18fe509f965e65440efe4e792867f373 1029 SUPERFAMILY SSF82693 137 324 2.09E-21 T 13-10-2018 P40_20770 18fe509f965e65440efe4e792867f373 1029 Gene3D G3DSA:3.30.2090.10 703 791 3.0E-283 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_20770 18fe509f965e65440efe4e792867f373 1029 Gene3D G3DSA:3.30.70.1320 133 326 3.0E-283 T 13-10-2018 P40_20770 18fe509f965e65440efe4e792867f373 1029 Gene3D G3DSA:1.20.1640.10 10 503 3.0E-283 T 13-10-2018 P40_20770 18fe509f965e65440efe4e792867f373 1029 SUPERFAMILY SSF82714 705 789 3.27E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_20770 18fe509f965e65440efe4e792867f373 1029 SUPERFAMILY SSF82693 556 650 8.37E-12 T 13-10-2018 P40_20770 18fe509f965e65440efe4e792867f373 1029 SUPERFAMILY SSF82866 290 491 9.29E-46 T 13-10-2018 P40_20770 18fe509f965e65440efe4e792867f373 1029 Gene3D G3DSA:3.30.70.1440 652 848 3.0E-283 T 13-10-2018 P40_20770 18fe509f965e65440efe4e792867f373 1029 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.4E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20770 18fe509f965e65440efe4e792867f373 1029 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.4E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20770 18fe509f965e65440efe4e792867f373 1029 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.4E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20770 18fe509f965e65440efe4e792867f373 1029 PRINTS PR00702 Acriflavin resistance protein family signature 607 621 2.4E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20770 18fe509f965e65440efe4e792867f373 1029 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.4E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20770 18fe509f965e65440efe4e792867f373 1029 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.4E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20770 18fe509f965e65440efe4e792867f373 1029 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 2.4E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20770 18fe509f965e65440efe4e792867f373 1029 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.4E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20770 18fe509f965e65440efe4e792867f373 1029 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.4E-74 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20770 18fe509f965e65440efe4e792867f373 1029 Gene3D G3DSA:3.30.70.1430 558 651 3.0E-283 T 13-10-2018 P40_20770 18fe509f965e65440efe4e792867f373 1029 Gene3D G3DSA:3.30.2090.10 179 269 3.0E-283 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_20770 18fe509f965e65440efe4e792867f373 1029 Gene3D G3DSA:3.30.70.1430 40 799 3.0E-283 T 13-10-2018 P40_20770 18fe509f965e65440efe4e792867f373 1029 SUPERFAMILY SSF82693 40 134 5.49E-24 T 13-10-2018 P40_20770 18fe509f965e65440efe4e792867f373 1029 SUPERFAMILY SSF82714 183 266 4.05E-16 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_20770 18fe509f965e65440efe4e792867f373 1029 SUPERFAMILY SSF82866 788 1011 5.89E-40 T 13-10-2018 P40_20770 18fe509f965e65440efe4e792867f373 1029 Pfam PF00873 AcrB/AcrD/AcrF family 5 1009 2.1E-301 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_11500 cebcc94346af07cf254294bdd41e588b 165 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 37 54 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 P40_11500 cebcc94346af07cf254294bdd41e588b 165 PIRSF PIRSF001467 1 165 2.3E-28 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 P40_11500 cebcc94346af07cf254294bdd41e588b 165 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 161 1.7E-48 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 P40_11500 cebcc94346af07cf254294bdd41e588b 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 3.7E-13 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 P40_11500 cebcc94346af07cf254294bdd41e588b 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 3.7E-13 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 P40_11500 cebcc94346af07cf254294bdd41e588b 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 3.7E-13 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 P40_11500 cebcc94346af07cf254294bdd41e588b 165 Gene3D G3DSA:2.40.100.10 1 163 6.7E-66 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily P40_11500 cebcc94346af07cf254294bdd41e588b 165 SUPERFAMILY SSF50891 1 163 8.62E-59 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily P40_15735 28efffac577c2cdd21584ae3f939f365 353 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 222 294 4.2E-11 T 13-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal P40_15735 28efffac577c2cdd21584ae3f939f365 353 Pfam PF07282 Putative transposase DNA-binding domain 267 337 2.2E-22 T 13-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal P40_15735 28efffac577c2cdd21584ae3f939f365 353 Pfam PF01385 Probable transposase 156 248 2.2E-14 T 13-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 P40_13390 61420972054f4a146dded4d833706c96 671 Pfam PF00593 TonB dependent receptor 265 667 4.8E-60 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_13390 61420972054f4a146dded4d833706c96 671 Gene3D G3DSA:2.170.130.10 32 160 6.8E-39 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_13390 61420972054f4a146dded4d833706c96 671 Gene3D G3DSA:2.40.170.20 166 671 2.2E-137 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_13390 61420972054f4a146dded4d833706c96 671 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 155 1.7E-27 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_13390 61420972054f4a146dded4d833706c96 671 SUPERFAMILY SSF56935 32 671 5.95E-127 T 13-10-2018 P40_15940 c033a8094e0ed6c39d0e36ebd2c68c7b 553 Pfam PF08447 PAS fold 31 114 2.9E-16 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 P40_15940 c033a8094e0ed6c39d0e36ebd2c68c7b 553 SUPERFAMILY SSF55785 20 114 3.49E-28 T 13-10-2018 IPR035965 PAS domain superfamily P40_15940 c033a8094e0ed6c39d0e36ebd2c68c7b 553 Gene3D G3DSA:1.10.287.950 228 530 2.1E-76 T 13-10-2018 P40_15940 c033a8094e0ed6c39d0e36ebd2c68c7b 553 SMART SM00283 281 528 6.7E-78 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_15940 c033a8094e0ed6c39d0e36ebd2c68c7b 553 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 114 2.1E-14 T 13-10-2018 IPR000014 PAS domain P40_15940 c033a8094e0ed6c39d0e36ebd2c68c7b 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 494 1.5E-47 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_15940 c033a8094e0ed6c39d0e36ebd2c68c7b 553 SUPERFAMILY SSF58104 252 529 1.14E-63 T 13-10-2018 P40_15940 c033a8094e0ed6c39d0e36ebd2c68c7b 553 SMART SM00091 8 74 1.7E-5 T 13-10-2018 IPR000014 PAS domain P40_15940 c033a8094e0ed6c39d0e36ebd2c68c7b 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 302 331 6.3E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_15940 c033a8094e0ed6c39d0e36ebd2c68c7b 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 406 6.3E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_15940 c033a8094e0ed6c39d0e36ebd2c68c7b 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 6.3E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_15940 c033a8094e0ed6c39d0e36ebd2c68c7b 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 6.3E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_15940 c033a8094e0ed6c39d0e36ebd2c68c7b 553 Gene3D G3DSA:3.30.450.20 3 116 2.8E-26 T 13-10-2018 P40_10470 d3029c2fc09fbac215bcda752055590f 315 Gene3D G3DSA:2.60.120.10 18 263 8.7E-63 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_10470 d3029c2fc09fbac215bcda752055590f 315 Pfam PF05726 Pirin C-terminal cupin domain 191 286 2.6E-18 T 13-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 P40_10470 d3029c2fc09fbac215bcda752055590f 315 SUPERFAMILY SSF51182 32 299 3.78E-70 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_10470 d3029c2fc09fbac215bcda752055590f 315 Pfam PF02678 Pirin 45 138 1.8E-29 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 P40_10470 d3029c2fc09fbac215bcda752055590f 315 PIRSF PIRSF006232 18 300 8.1E-74 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 Gene3D G3DSA:3.30.230.10 333 455 4.2E-19 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 Hamap MF_01498 DNA repair protein RadA [radA]. 21 444 42.406 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 PRINTS PR01874 DNA repair protein radA signature 323 346 4.7E-94 T 13-10-2018 P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 PRINTS PR01874 DNA repair protein radA signature 175 199 4.7E-94 T 13-10-2018 P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 PRINTS PR01874 DNA repair protein radA signature 249 275 4.7E-94 T 13-10-2018 P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 PRINTS PR01874 DNA repair protein radA signature 84 112 4.7E-94 T 13-10-2018 P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 PRINTS PR01874 DNA repair protein radA signature 125 142 4.7E-94 T 13-10-2018 P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 PRINTS PR01874 DNA repair protein radA signature 214 242 4.7E-94 T 13-10-2018 P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 PRINTS PR01874 DNA repair protein radA signature 10 34 4.7E-94 T 13-10-2018 P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 Gene3D G3DSA:3.40.50.300 69 293 1.4E-38 T 13-10-2018 P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 SUPERFAMILY SSF54211 256 454 1.33E-40 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 Pfam PF13541 Subunit ChlI of Mg-chelatase 367 431 4.4E-8 T 13-10-2018 P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 SMART SM00382 92 245 4.4E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 5.7E-200 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 SUPERFAMILY SSF52540 70 287 3.47E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03750 b7004e646a326baa917464e2c0f7e1ac 455 Pfam PF13481 AAA domain 84 223 6.7E-15 T 13-10-2018 P40_19315 2c6f542be5a0b36642b253f2137ee45a 163 Gene3D G3DSA:3.40.50.300 1 159 1.0E-51 T 13-10-2018 P40_19315 2c6f542be5a0b36642b253f2137ee45a 163 ProSitePatterns PS01128 Shikimate kinase signature. 48 73 - T 13-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 P40_19315 2c6f542be5a0b36642b253f2137ee45a 163 SUPERFAMILY SSF52540 1 156 5.52E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_19315 2c6f542be5a0b36642b253f2137ee45a 163 PRINTS PR01100 Shikimate kinase family signature 47 55 6.3E-16 T 13-10-2018 P40_19315 2c6f542be5a0b36642b253f2137ee45a 163 PRINTS PR01100 Shikimate kinase family signature 86 103 6.3E-16 T 13-10-2018 P40_19315 2c6f542be5a0b36642b253f2137ee45a 163 PRINTS PR01100 Shikimate kinase family signature 19 32 6.3E-16 T 13-10-2018 P40_19315 2c6f542be5a0b36642b253f2137ee45a 163 PRINTS PR01100 Shikimate kinase family signature 65 74 6.3E-16 T 13-10-2018 P40_19315 2c6f542be5a0b36642b253f2137ee45a 163 Pfam PF01202 Shikimate kinase 1 156 1.7E-53 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 P40_19315 2c6f542be5a0b36642b253f2137ee45a 163 Hamap MF_00109 Shikimate kinase [aroK]. 1 158 24.524 T 13-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 P40_18220 4ef3fd62a2039f3378bf18147f41a6ca 137 SUPERFAMILY SSF54686 1 134 1.31E-56 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 P40_18220 4ef3fd62a2039f3378bf18147f41a6ca 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 9.0E-50 T 13-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 P40_18220 4ef3fd62a2039f3378bf18147f41a6ca 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 39.249 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18220 4ef3fd62a2039f3378bf18147f41a6ca 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.3E-39 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18220 4ef3fd62a2039f3378bf18147f41a6ca 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.3E-39 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18220 4ef3fd62a2039f3378bf18147f41a6ca 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.3E-39 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18220 4ef3fd62a2039f3378bf18147f41a6ca 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.3E-39 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18220 4ef3fd62a2039f3378bf18147f41a6ca 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18220 4ef3fd62a2039f3378bf18147f41a6ca 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.4E-60 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18220 4ef3fd62a2039f3378bf18147f41a6ca 137 Gene3D G3DSA:3.90.1170.10 1 137 7.6E-57 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 P40_18220 4ef3fd62a2039f3378bf18147f41a6ca 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_05655 87223a8fdf68ea10927cfac79d232d1e 150 Pfam PF02657 Fe-S metabolism associated domain 22 143 4.0E-46 T 13-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like P40_05655 87223a8fdf68ea10927cfac79d232d1e 150 Gene3D G3DSA:3.90.1010.10 1 148 2.0E-49 T 13-10-2018 P40_05655 87223a8fdf68ea10927cfac79d232d1e 150 SUPERFAMILY SSF82649 14 146 3.3E-44 T 13-10-2018 P40_21390 8be4d0f01f553364f36ee686f1143f90 281 SUPERFAMILY SSF46955 36 108 8.79E-16 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_21390 8be4d0f01f553364f36ee686f1143f90 281 SMART SM00422 36 104 7.6E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_21390 8be4d0f01f553364f36ee686f1143f90 281 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 71 91 1.4E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_21390 8be4d0f01f553364f36ee686f1143f90 281 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 48 1.4E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_21390 8be4d0f01f553364f36ee686f1143f90 281 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 48 61 1.4E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_21390 8be4d0f01f553364f36ee686f1143f90 281 Pfam PF13411 MerR HTH family regulatory protein 36 103 7.5E-19 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_20865 6ce042ad63fbd69cf68931ed81289f65 213 Gene3D G3DSA:1.10.760.10 103 209 1.5E-27 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_20865 6ce042ad63fbd69cf68931ed81289f65 213 SUPERFAMILY SSF46626 107 208 3.64E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_20865 6ce042ad63fbd69cf68931ed81289f65 213 SUPERFAMILY SSF46626 20 98 1.12E-21 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_20865 6ce042ad63fbd69cf68931ed81289f65 213 Gene3D G3DSA:1.10.760.10 22 99 4.5E-27 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_20865 6ce042ad63fbd69cf68931ed81289f65 213 Pfam PF00034 Cytochrome c 26 98 4.4E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_20865 6ce042ad63fbd69cf68931ed81289f65 213 Pfam PF00034 Cytochrome c 121 209 2.9E-12 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_20865 6ce042ad63fbd69cf68931ed81289f65 213 PIRSF PIRSF000005 1 211 1.7E-60 T 13-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 P40_15425 12d728ee94ff49a5726f427e8b91b244 486 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 2 485 1.2E-224 T 13-10-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 P40_15425 12d728ee94ff49a5726f427e8b91b244 486 Pfam PF00171 Aldehyde dehydrogenase family 13 472 5.0E-178 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_15425 12d728ee94ff49a5726f427e8b91b244 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 269 280 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 P40_15425 12d728ee94ff49a5726f427e8b91b244 486 SUPERFAMILY SSF53720 2 478 6.54E-172 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_15425 12d728ee94ff49a5726f427e8b91b244 486 Gene3D G3DSA:3.40.605.10 14 472 6.5E-184 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_15425 12d728ee94ff49a5726f427e8b91b244 486 Gene3D G3DSA:3.40.309.10 248 444 6.5E-184 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_15425 12d728ee94ff49a5726f427e8b91b244 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 241 248 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 P40_07850 613067351cc9aaffcc3b9b79faa2d2a1 306 Pfam PF02558 Ketopantoate reductase PanE/ApbA 7 155 1.0E-36 T 13-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain P40_07850 613067351cc9aaffcc3b9b79faa2d2a1 306 Gene3D G3DSA:3.40.50.720 4 180 1.2E-61 T 13-10-2018 P40_07850 613067351cc9aaffcc3b9b79faa2d2a1 306 Gene3D G3DSA:1.10.1040.10 181 306 2.1E-40 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 P40_07850 613067351cc9aaffcc3b9b79faa2d2a1 306 SUPERFAMILY SSF51735 7 157 1.29E-11 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_07850 613067351cc9aaffcc3b9b79faa2d2a1 306 SUPERFAMILY SSF48179 184 305 3.74E-26 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_07850 613067351cc9aaffcc3b9b79faa2d2a1 306 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 183 304 3.5E-28 T 13-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain P40_07850 613067351cc9aaffcc3b9b79faa2d2a1 306 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 7 303 4.5E-62 T 13-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 P40_00430 617c949ad230e04710a249c884bd3677 334 SUPERFAMILY SSF47616 175 328 2.37E-36 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_00430 617c949ad230e04710a249c884bd3677 334 PIRSF PIRSF015753 5 324 1.4E-131 T 13-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 P40_00430 617c949ad230e04710a249c884bd3677 334 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 8.3E-22 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_00430 617c949ad230e04710a249c884bd3677 334 Gene3D G3DSA:1.20.1050.10 174 284 2.4E-136 T 13-10-2018 P40_00430 617c949ad230e04710a249c884bd3677 334 Gene3D G3DSA:3.40.30.130 21 317 2.4E-136 T 13-10-2018 P40_00430 617c949ad230e04710a249c884bd3677 334 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 271 5.1E-11 T 13-10-2018 P40_00430 617c949ad230e04710a249c884bd3677 334 SUPERFAMILY SSF52833 42 162 1.07E-15 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_13985 79b3b3af01e7634b2fb8f1e2f3ecdf9a 221 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 116 208 2.8E-19 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 P40_13985 79b3b3af01e7634b2fb8f1e2f3ecdf9a 221 SMART SM00702 26 208 1.2E-19 T 13-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 P40_13985 79b3b3af01e7634b2fb8f1e2f3ecdf9a 221 Gene3D G3DSA:2.60.120.620 16 212 2.3E-53 T 13-10-2018 P40_00440 c088e1ae24e2c535ad30bb80101e07c5 373 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 344 1.3E-131 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 P40_00440 c088e1ae24e2c535ad30bb80101e07c5 373 SUPERFAMILY SSF52540 4 337 1.71E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_00440 c088e1ae24e2c535ad30bb80101e07c5 373 Gene3D G3DSA:3.30.450.90 1 99 3.8E-30 T 13-10-2018 P40_00440 c088e1ae24e2c535ad30bb80101e07c5 373 SMART SM00382 122 247 0.0021 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_00440 c088e1ae24e2c535ad30bb80101e07c5 373 Pfam PF00437 Type II/IV secretion system protein 119 245 2.2E-32 T 13-10-2018 IPR001482 Type II/IV secretion system protein P40_00440 c088e1ae24e2c535ad30bb80101e07c5 373 Gene3D G3DSA:3.40.50.300 101 356 3.9E-84 T 13-10-2018 P40_12070 ced7f9cc64a0a1a5e586dfa20f99d0d1 470 SUPERFAMILY SSF103647 31 120 7.45E-18 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 P40_12070 ced7f9cc64a0a1a5e586dfa20f99d0d1 470 SUPERFAMILY SSF103647 93 207 2.03E-31 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 P40_12070 ced7f9cc64a0a1a5e586dfa20f99d0d1 470 SUPERFAMILY SSF103647 246 292 1.44E-8 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 P40_12070 ced7f9cc64a0a1a5e586dfa20f99d0d1 470 Pfam PF02412 Thrombospondin type 3 repeat 42 64 3.2E-4 T 13-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 P40_12070 ced7f9cc64a0a1a5e586dfa20f99d0d1 470 Pfam PF02412 Thrombospondin type 3 repeat 212 244 7.2E-8 T 13-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 P40_12070 ced7f9cc64a0a1a5e586dfa20f99d0d1 470 Pfam PF02412 Thrombospondin type 3 repeat 102 138 2.7E-9 T 13-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 P40_12070 ced7f9cc64a0a1a5e586dfa20f99d0d1 470 Pfam PF02412 Thrombospondin type 3 repeat 140 174 1.4E-12 T 13-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 P40_12070 ced7f9cc64a0a1a5e586dfa20f99d0d1 470 Pfam PF02412 Thrombospondin type 3 repeat 65 100 9.4E-10 T 13-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 P40_12070 ced7f9cc64a0a1a5e586dfa20f99d0d1 470 Pfam PF02412 Thrombospondin type 3 repeat 256 278 1.9E-4 T 13-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 P40_12070 ced7f9cc64a0a1a5e586dfa20f99d0d1 470 Pfam PF02412 Thrombospondin type 3 repeat 176 210 1.5E-10 T 13-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 P40_12070 ced7f9cc64a0a1a5e586dfa20f99d0d1 470 Gene3D G3DSA:4.10.1080.10 248 347 1.7E-9 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 P40_12070 ced7f9cc64a0a1a5e586dfa20f99d0d1 470 Gene3D G3DSA:4.10.1080.10 187 247 1.0E-14 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 P40_12070 ced7f9cc64a0a1a5e586dfa20f99d0d1 470 Gene3D G3DSA:4.10.1080.10 27 119 1.1E-22 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 P40_14970 dc554e22f61488b92cbf6550d5f0b198 184 SUPERFAMILY SSF54364 18 90 4.45E-29 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 P40_14970 dc554e22f61488b92cbf6550d5f0b198 184 SUPERFAMILY SSF55200 95 183 4.58E-33 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 P40_14970 dc554e22f61488b92cbf6550d5f0b198 184 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 19 182 7.4E-70 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 P40_14970 dc554e22f61488b92cbf6550d5f0b198 184 Gene3D G3DSA:3.10.20.80 14 87 8.4E-34 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 P40_14970 dc554e22f61488b92cbf6550d5f0b198 184 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 95 179 2.3E-38 T 13-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 P40_14970 dc554e22f61488b92cbf6550d5f0b198 184 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 19 87 2.9E-33 T 13-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 P40_14970 dc554e22f61488b92cbf6550d5f0b198 184 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 11 182 30.545 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 P40_14970 dc554e22f61488b92cbf6550d5f0b198 184 Gene3D G3DSA:3.30.110.10 88 183 2.0E-38 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 P40_04465 338c98a1daf6030cd1d23f3ad4b8f2fe 268 Gene3D G3DSA:1.10.10.10 183 251 3.5E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_04465 338c98a1daf6030cd1d23f3ad4b8f2fe 268 SMART SM00421 188 245 3.3E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04465 338c98a1daf6030cd1d23f3ad4b8f2fe 268 Pfam PF03472 Autoinducer binding domain 23 167 3.9E-20 T 13-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain P40_04465 338c98a1daf6030cd1d23f3ad4b8f2fe 268 Gene3D G3DSA:3.30.450.80 4 177 1.2E-23 T 13-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily P40_04465 338c98a1daf6030cd1d23f3ad4b8f2fe 268 SUPERFAMILY SSF75516 13 173 1.57E-23 T 13-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily P40_04465 338c98a1daf6030cd1d23f3ad4b8f2fe 268 SUPERFAMILY SSF46894 180 246 6.12E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_04465 338c98a1daf6030cd1d23f3ad4b8f2fe 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 205 221 7.2E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04465 338c98a1daf6030cd1d23f3ad4b8f2fe 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 205 7.2E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04465 338c98a1daf6030cd1d23f3ad4b8f2fe 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 221 233 7.2E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04465 338c98a1daf6030cd1d23f3ad4b8f2fe 268 Pfam PF00196 Bacterial regulatory proteins, luxR family 190 244 6.1E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04465 338c98a1daf6030cd1d23f3ad4b8f2fe 268 ProSitePatterns PS00622 LuxR-type HTH domain signature. 205 232 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_15685 6c11e9d2f45b7a038d6bc9cee26ed3d5 362 Gene3D G3DSA:1.10.150.20 167 231 5.5E-18 T 13-10-2018 P40_15685 6c11e9d2f45b7a038d6bc9cee26ed3d5 362 SUPERFAMILY SSF56672 1 235 5.16E-90 T 13-10-2018 P40_15685 6c11e9d2f45b7a038d6bc9cee26ed3d5 362 Gene3D G3DSA:3.30.1490.100 238 348 2.0E-25 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 P40_15685 6c11e9d2f45b7a038d6bc9cee26ed3d5 362 Gene3D G3DSA:2.30.40.20 22 74 1.4E-64 T 13-10-2018 P40_15685 6c11e9d2f45b7a038d6bc9cee26ed3d5 362 SUPERFAMILY SSF100879 242 348 3.34E-22 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 P40_15685 6c11e9d2f45b7a038d6bc9cee26ed3d5 362 Pfam PF11799 impB/mucB/samB family C-terminal domain 234 336 1.4E-9 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 P40_15685 6c11e9d2f45b7a038d6bc9cee26ed3d5 362 Hamap MF_01113 DNA polymerase IV [dinB]. 2 348 37.085 T 13-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 P40_15685 6c11e9d2f45b7a038d6bc9cee26ed3d5 362 Gene3D G3DSA:3.30.70.270 5 165 1.4E-64 T 13-10-2018 P40_15685 6c11e9d2f45b7a038d6bc9cee26ed3d5 362 Pfam PF00817 impB/mucB/samB family 8 155 1.0E-50 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 SUPERFAMILY SSF46689 85 134 1.66E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 Pfam PF02805 Metal binding domain of Ada 7 71 2.3E-30 T 13-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 Gene3D G3DSA:3.30.310.20 197 311 6.1E-38 T 13-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 317 451 2.9E-7 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 Gene3D G3DSA:1.10.10.60 80 193 6.9E-27 T 13-10-2018 P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 Gene3D G3DSA:3.40.10.10 1 73 3.1E-31 T 13-10-2018 IPR035451 Ada-like domain superfamily P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 SMART SM00342 100 183 2.3E-28 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 SUPERFAMILY SSF46689 136 185 4.93E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 Pfam PF06029 AlkA N-terminal domain 198 311 3.5E-32 T 13-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 SMART SM00478 321 477 3.9E-12 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 Pfam PF12833 Helix-turn-helix domain 106 184 2.4E-26 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 SUPERFAMILY SSF57884 2 77 1.22E-33 T 13-10-2018 IPR035451 Ada-like domain superfamily P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 SUPERFAMILY SSF48150 301 474 1.27E-40 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 SUPERFAMILY SSF55945 198 296 4.39E-24 T 13-10-2018 P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 Gene3D G3DSA:1.10.1670.10 432 480 6.4E-17 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 Gene3D G3DSA:1.10.340.30 312 430 6.2E-30 T 13-10-2018 P40_02065 3c40e7c4b2a9a8c855add6512118b2e6 482 SMART SM01009 197 311 6.0E-47 T 13-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal P40_14050 cd144b5a6c237114bebb6c18cdbbfeb2 345 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 343 2.1E-136 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_14050 cd144b5a6c237114bebb6c18cdbbfeb2 345 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_14050 cd144b5a6c237114bebb6c18cdbbfeb2 345 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_14050 cd144b5a6c237114bebb6c18cdbbfeb2 345 Hamap MF_00219 Dihydroorotase [pyrC]. 3 344 45.201 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_14050 cd144b5a6c237114bebb6c18cdbbfeb2 345 SUPERFAMILY SSF51556 3 343 2.95E-142 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_14050 cd144b5a6c237114bebb6c18cdbbfeb2 345 PIRSF PIRSF001237 1 345 7.1E-137 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_14050 cd144b5a6c237114bebb6c18cdbbfeb2 345 Pfam PF01979 Amidohydrolase family 12 307 4.3E-15 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P40_14050 cd144b5a6c237114bebb6c18cdbbfeb2 345 Gene3D G3DSA:3.20.20.140 3 344 9.3E-111 T 13-10-2018 P40_06200 1e6d2d93c5cba008e332290e5d13860d 230 SUPERFAMILY SSF52317 6 185 1.74E-44 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_06200 1e6d2d93c5cba008e332290e5d13860d 230 Pfam PF01965 DJ-1/PfpI family 7 166 1.0E-23 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 P40_06200 1e6d2d93c5cba008e332290e5d13860d 230 Gene3D G3DSA:3.40.50.880 1 227 3.1E-65 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_12380 dee1df77459b0891e6800ccabe183d76 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 217 279 3.4E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_12380 dee1df77459b0891e6800ccabe183d76 437 Gene3D G3DSA:3.30.565.10 284 429 1.0E-22 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_12380 dee1df77459b0891e6800ccabe183d76 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 8.4E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_12380 dee1df77459b0891e6800ccabe183d76 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 8.4E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_12380 dee1df77459b0891e6800ccabe183d76 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 8.4E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_12380 dee1df77459b0891e6800ccabe183d76 437 SMART SM00388 215 281 4.1E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_12380 dee1df77459b0891e6800ccabe183d76 437 Gene3D G3DSA:1.10.287.130 165 281 9.9E-17 T 13-10-2018 P40_12380 dee1df77459b0891e6800ccabe183d76 437 SUPERFAMILY SSF55874 274 428 4.71E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_12380 dee1df77459b0891e6800ccabe183d76 437 SUPERFAMILY SSF47384 198 278 8.63E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_12380 dee1df77459b0891e6800ccabe183d76 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 428 6.4E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_12380 dee1df77459b0891e6800ccabe183d76 437 SMART SM00387 325 432 1.6E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_01080 0711e65d0ed6ecfeb0e57901b40f1bc7 314 Pfam PF01548 Transposase 10 149 1.8E-21 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_01080 0711e65d0ed6ecfeb0e57901b40f1bc7 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 193 274 1.3E-19 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_20835 c1f31741474c2c3dd8013ff476edef25 288 SUPERFAMILY SSF52540 3 219 2.61E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_20835 c1f31741474c2c3dd8013ff476edef25 288 SMART SM00382 28 205 1.4E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_20835 c1f31741474c2c3dd8013ff476edef25 288 Pfam PF00005 ABC transporter 19 156 1.1E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_20835 c1f31741474c2c3dd8013ff476edef25 288 Gene3D G3DSA:3.40.50.300 1 224 3.1E-60 T 13-10-2018 P40_20835 c1f31741474c2c3dd8013ff476edef25 288 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_11220 9d7fbef7f3dc4e5b6d824fdc1fd0d9bf 520 SUPERFAMILY SSF53067 6 256 1.07E-52 T 13-10-2018 P40_11220 9d7fbef7f3dc4e5b6d824fdc1fd0d9bf 520 Gene3D G3DSA:3.30.420.40 250 516 8.6E-63 T 13-10-2018 P40_11220 9d7fbef7f3dc4e5b6d824fdc1fd0d9bf 520 PIRSF PIRSF000538 3 512 4.4E-114 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 P40_11220 9d7fbef7f3dc4e5b6d824fdc1fd0d9bf 520 SUPERFAMILY SSF53067 258 494 9.83E-53 T 13-10-2018 P40_11220 9d7fbef7f3dc4e5b6d824fdc1fd0d9bf 520 Gene3D G3DSA:3.30.420.40 2 249 3.8E-59 T 13-10-2018 P40_11220 9d7fbef7f3dc4e5b6d824fdc1fd0d9bf 520 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 1.1E-35 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 P40_11220 9d7fbef7f3dc4e5b6d824fdc1fd0d9bf 520 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 457 5.0E-32 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 P40_16800 8891a78830172cfd28108dd33805e063 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_16800 8891a78830172cfd28108dd33805e063 241 SUPERFAMILY SSF52540 4 236 4.83E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_16800 8891a78830172cfd28108dd33805e063 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 1.3E-121 T 13-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 P40_16800 8891a78830172cfd28108dd33805e063 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 5.8E-5 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal P40_16800 8891a78830172cfd28108dd33805e063 241 SMART SM00382 28 221 2.6E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_16800 8891a78830172cfd28108dd33805e063 241 Pfam PF00005 ABC transporter 20 166 7.9E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_16800 8891a78830172cfd28108dd33805e063 241 Gene3D G3DSA:3.40.50.300 2 241 1.8E-69 T 13-10-2018 P40_00225 979799f80b78d57639221a68e0c271ae 227 Pfam PF01144 Coenzyme A transferase 8 218 1.0E-66 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 P40_00225 979799f80b78d57639221a68e0c271ae 227 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 13-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 P40_00225 979799f80b78d57639221a68e0c271ae 227 SUPERFAMILY SSF100950 2 220 2.21E-78 T 13-10-2018 IPR037171 NagB/RpiA transferase-like P40_00225 979799f80b78d57639221a68e0c271ae 227 SMART SM00882 6 219 1.3E-74 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 P40_00225 979799f80b78d57639221a68e0c271ae 227 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 2 220 5.2E-102 T 13-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 P40_00225 979799f80b78d57639221a68e0c271ae 227 Gene3D G3DSA:3.40.1080.10 1 218 1.4E-83 T 13-10-2018 P40_06320 088f493035f6ff53a5ee18c8c703f803 278 Gene3D G3DSA:2.60.120.10 5 98 1.8E-5 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_06320 088f493035f6ff53a5ee18c8c703f803 278 Pfam PF12833 Helix-turn-helix domain 194 272 1.9E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_06320 088f493035f6ff53a5ee18c8c703f803 278 SUPERFAMILY SSF46689 176 222 2.02E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06320 088f493035f6ff53a5ee18c8c703f803 278 SUPERFAMILY SSF51215 19 154 9.02E-24 T 13-10-2018 IPR037923 Transcription regulator HTH-like P40_06320 088f493035f6ff53a5ee18c8c703f803 278 SMART SM00342 188 270 2.3E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_06320 088f493035f6ff53a5ee18c8c703f803 278 Gene3D G3DSA:1.10.10.60 174 275 4.1E-28 T 13-10-2018 P40_06320 088f493035f6ff53a5ee18c8c703f803 278 SUPERFAMILY SSF46689 224 273 1.03E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06320 088f493035f6ff53a5ee18c8c703f803 278 Pfam PF02311 AraC-like ligand binding domain 16 147 7.7E-25 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 P40_14325 8072191f03116a0bb544ad1299e0721a 989 Gene3D G3DSA:2.160.20.10 59 384 2.7E-14 T 13-10-2018 IPR012334 Pectin lyase fold P40_14325 8072191f03116a0bb544ad1299e0721a 989 TIGRFAM TIGR03805 beta_helix_1: parallel beta-helix repeat-containing protein 198 389 3.3E-55 T 13-10-2018 IPR022442 Parallel beta-helix repeat-containing domain P40_14325 8072191f03116a0bb544ad1299e0721a 989 SUPERFAMILY SSF51126 55 380 3.59E-25 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor P40_14325 8072191f03116a0bb544ad1299e0721a 989 Pfam PF13229 Right handed beta helix region 121 281 7.0E-7 T 13-10-2018 IPR039448 Right handed beta helix domain P40_14325 8072191f03116a0bb544ad1299e0721a 989 SMART SM00710 235 256 9300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_14325 8072191f03116a0bb544ad1299e0721a 989 SMART SM00710 127 149 480.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_14325 8072191f03116a0bb544ad1299e0721a 989 SMART SM00710 257 278 2800.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_14325 8072191f03116a0bb544ad1299e0721a 989 SMART SM00710 365 386 9900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_14325 8072191f03116a0bb544ad1299e0721a 989 SMART SM00710 212 234 37.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_14325 8072191f03116a0bb544ad1299e0721a 989 SMART SM00710 324 346 8100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_15050 44ec806b5f783939a95ff5d80a118408 349 Pfam PF02445 Quinolinate synthetase A protein 32 342 9.0E-104 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 P40_15050 44ec806b5f783939a95ff5d80a118408 349 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 28 343 2.6E-108 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 P40_15050 44ec806b5f783939a95ff5d80a118408 349 SUPERFAMILY SSF142754 30 343 1.44E-107 T 13-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 P40_15050 44ec806b5f783939a95ff5d80a118408 349 Gene3D G3DSA:3.40.50.10800 32 324 3.6E-94 T 13-10-2018 P40_15050 44ec806b5f783939a95ff5d80a118408 349 Gene3D G3DSA:3.40.50.10800 116 342 3.6E-94 T 13-10-2018 P40_15050 44ec806b5f783939a95ff5d80a118408 349 Gene3D G3DSA:3.40.50.10800 201 296 3.6E-94 T 13-10-2018 P40_15050 44ec806b5f783939a95ff5d80a118408 349 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 349 66.923 T 13-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 Gene3D G3DSA:3.20.20.10 10 215 2.2E-112 T 13-10-2018 IPR029066 PLP-binding barrel P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 Gene3D G3DSA:2.40.37.10 216 352 2.2E-112 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 Pfam PF00842 Alanine racemase, C-terminal domain 234 352 2.7E-39 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 TIGRFAM TIGR00492 alr: alanine racemase 6 352 2.6E-97 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 Pfam PF01168 Alanine racemase, N-terminal domain 8 217 4.1E-60 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 SUPERFAMILY SSF50621 225 353 4.19E-45 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 SUPERFAMILY SSF51419 8 230 1.11E-60 T 13-10-2018 IPR029066 PLP-binding barrel P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 Hamap MF_01201 Alanine racemase. 1 354 32.5 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 SMART SM01005 231 354 2.5E-60 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 PRINTS PR00992 Alanine racemase signature 336 349 9.7E-63 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 PRINTS PR00992 Alanine racemase signature 247 262 9.7E-63 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 PRINTS PR00992 Alanine racemase signature 153 164 9.7E-63 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 PRINTS PR00992 Alanine racemase signature 264 279 9.7E-63 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 PRINTS PR00992 Alanine racemase signature 119 131 9.7E-63 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 PRINTS PR00992 Alanine racemase signature 285 302 9.7E-63 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 PRINTS PR00992 Alanine racemase signature 26 42 9.7E-63 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 PRINTS PR00992 Alanine racemase signature 190 217 9.7E-63 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_03745 1059186a2dee49c2397f8f5c3904cb21 354 PRINTS PR00992 Alanine racemase signature 61 79 9.7E-63 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_05895 f49729a118cff90bd645061ac739459a 96 Gene3D G3DSA:3.30.2310.20 12 94 1.5E-17 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily P40_05895 f49729a118cff90bd645061ac739459a 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 14 88 8.0E-11 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family P40_13125 556ec8221700973cad9045463e742d8a 186 Gene3D G3DSA:2.30.270.10 88 157 1.1E-27 T 13-10-2018 IPR023361 DUF1285, beta-roll domain superfamily P40_13125 556ec8221700973cad9045463e742d8a 186 Gene3D G3DSA:3.10.540.10 1 87 5.2E-32 T 13-10-2018 P40_13125 556ec8221700973cad9045463e742d8a 186 Pfam PF06938 Protein of unknown function (DUF1285) 37 181 4.3E-56 T 13-10-2018 IPR010707 Protein of unknown function DUF1285 P40_13125 556ec8221700973cad9045463e742d8a 186 PIRSF PIRSF029557 1 185 1.3E-63 T 13-10-2018 IPR010707 Protein of unknown function DUF1285 P40_11765 ec313381d85ebc0dc21b8149e5bcb9eb 291 Gene3D G3DSA:1.10.10.10 1 85 4.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_11765 ec313381d85ebc0dc21b8149e5bcb9eb 291 SUPERFAMILY SSF53850 91 290 7.29E-36 T 13-10-2018 P40_11765 ec313381d85ebc0dc21b8149e5bcb9eb 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11765 ec313381d85ebc0dc21b8149e5bcb9eb 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11765 ec313381d85ebc0dc21b8149e5bcb9eb 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11765 ec313381d85ebc0dc21b8149e5bcb9eb 291 SUPERFAMILY SSF46785 1 112 9.91E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_11765 ec313381d85ebc0dc21b8149e5bcb9eb 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.3E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11765 ec313381d85ebc0dc21b8149e5bcb9eb 291 Pfam PF03466 LysR substrate binding domain 89 289 6.1E-37 T 13-10-2018 IPR005119 LysR, substrate-binding P40_11765 ec313381d85ebc0dc21b8149e5bcb9eb 291 Gene3D G3DSA:3.40.190.290 91 290 1.3E-38 T 13-10-2018 P40_16360 251b6cb0bf908daff30080def3195bf0 156 SUPERFAMILY SSF54523 8 155 3.14E-31 T 13-10-2018 P40_16360 251b6cb0bf908daff30080def3195bf0 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 2.0E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_16360 251b6cb0bf908daff30080def3195bf0 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.4E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_16360 251b6cb0bf908daff30080def3195bf0 156 Pfam PF00114 Pilin (bacterial filament) 37 155 1.3E-21 T 13-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 P40_16360 251b6cb0bf908daff30080def3195bf0 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_16360 251b6cb0bf908daff30080def3195bf0 156 Gene3D G3DSA:3.30.700.10 8 156 7.7E-51 T 13-10-2018 P40_12075 73e017b3ae3c9d54576586082d7f37e3 321 SUPERFAMILY SSF56925 12 149 2.09E-5 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P40_12075 73e017b3ae3c9d54576586082d7f37e3 321 ProSitePatterns PS01068 OmpA-like domain. 251 295 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 P40_12075 73e017b3ae3c9d54576586082d7f37e3 321 Pfam PF00691 OmpA family 217 313 8.2E-27 T 13-10-2018 IPR006665 OmpA-like domain P40_12075 73e017b3ae3c9d54576586082d7f37e3 321 Gene3D G3DSA:3.30.1330.60 198 321 3.6E-43 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_12075 73e017b3ae3c9d54576586082d7f37e3 321 SUPERFAMILY SSF103647 175 204 1.15E-6 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 P40_12075 73e017b3ae3c9d54576586082d7f37e3 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 264 281 7.7E-11 T 13-10-2018 P40_12075 73e017b3ae3c9d54576586082d7f37e3 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 282 301 7.7E-11 T 13-10-2018 P40_12075 73e017b3ae3c9d54576586082d7f37e3 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 302 321 7.7E-11 T 13-10-2018 P40_12075 73e017b3ae3c9d54576586082d7f37e3 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 205 232 7.7E-11 T 13-10-2018 P40_12075 73e017b3ae3c9d54576586082d7f37e3 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 235 261 7.7E-11 T 13-10-2018 P40_12075 73e017b3ae3c9d54576586082d7f37e3 321 PRINTS PR01021 OMPA domain signature 218 240 7.0E-16 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_12075 73e017b3ae3c9d54576586082d7f37e3 321 PRINTS PR01021 OMPA domain signature 249 264 7.0E-16 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_12075 73e017b3ae3c9d54576586082d7f37e3 321 PRINTS PR01021 OMPA domain signature 264 280 7.0E-16 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_12075 73e017b3ae3c9d54576586082d7f37e3 321 SUPERFAMILY SSF103088 207 319 2.62E-38 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_19405 d3f68f47f63da125dec967a2fe9ef115 615 Pfam PF00920 Dehydratase family 34 606 8.1E-223 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 P40_19405 d3f68f47f63da125dec967a2fe9ef115 615 SUPERFAMILY SSF52016 419 610 3.84E-60 T 13-10-2018 P40_19405 d3f68f47f63da125dec967a2fe9ef115 615 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 P40_19405 d3f68f47f63da125dec967a2fe9ef115 615 SUPERFAMILY SSF143975 4 418 2.88E-135 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 P40_19405 d3f68f47f63da125dec967a2fe9ef115 615 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 609 45.247 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 P40_19405 d3f68f47f63da125dec967a2fe9ef115 615 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 609 2.6E-256 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 P40_19405 d3f68f47f63da125dec967a2fe9ef115 615 Gene3D G3DSA:3.50.30.80 419 570 1.0E-54 T 13-10-2018 P40_19405 d3f68f47f63da125dec967a2fe9ef115 615 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 P40_00585 242784edcc73e598b5648d1c30b07ebc 232 Gene3D G3DSA:1.10.10.10 129 231 3.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_00585 242784edcc73e598b5648d1c30b07ebc 232 Gene3D G3DSA:3.40.50.2300 1 125 1.4E-33 T 13-10-2018 P40_00585 242784edcc73e598b5648d1c30b07ebc 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 223 5.4E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_00585 242784edcc73e598b5648d1c30b07ebc 232 SMART SM00448 4 116 5.5E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_00585 242784edcc73e598b5648d1c30b07ebc 232 Pfam PF00072 Response regulator receiver domain 6 117 4.0E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_00585 242784edcc73e598b5648d1c30b07ebc 232 SMART SM00862 150 224 3.3E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_00585 242784edcc73e598b5648d1c30b07ebc 232 SUPERFAMILY SSF52172 2 187 1.71E-36 T 13-10-2018 IPR011006 CheY-like superfamily P40_11285 8341179f4372aabe1145d7fb13959441 521 Pfam PF01645 Conserved region in glutamate synthase 151 467 5.6E-80 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 P40_11285 8341179f4372aabe1145d7fb13959441 521 Gene3D G3DSA:3.20.20.70 129 493 1.5E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_11285 8341179f4372aabe1145d7fb13959441 521 PIRSF PIRSF006429 5 500 2.0E-145 T 13-10-2018 IPR024188 Glutamate synthase large subunit-like protein P40_11285 8341179f4372aabe1145d7fb13959441 521 SUPERFAMILY SSF51395 16 495 1.89E-120 T 13-10-2018 P40_02825 dbd6325835930d32c872bfbaa2fd82e7 155 SUPERFAMILY SSF54611 4 143 7.19E-51 T 13-10-2018 IPR035958 SecB-like superfamily P40_02825 dbd6325835930d32c872bfbaa2fd82e7 155 Pfam PF02556 Preprotein translocase subunit SecB 3 145 1.1E-54 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 P40_02825 dbd6325835930d32c872bfbaa2fd82e7 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 4 143 2.3E-53 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 P40_02825 dbd6325835930d32c872bfbaa2fd82e7 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 146 31.934 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 P40_02825 dbd6325835930d32c872bfbaa2fd82e7 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 98 120 4.6E-35 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 P40_02825 dbd6325835930d32c872bfbaa2fd82e7 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 11 28 4.6E-35 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 P40_02825 dbd6325835930d32c872bfbaa2fd82e7 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 124 142 4.6E-35 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 P40_02825 dbd6325835930d32c872bfbaa2fd82e7 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 74 94 4.6E-35 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 P40_02825 dbd6325835930d32c872bfbaa2fd82e7 155 Gene3D G3DSA:3.10.420.10 1 154 2.4E-56 T 13-10-2018 IPR035958 SecB-like superfamily P40_17905 d0e65229dbced4fb0a70bbee2616d2cb 156 SUPERFAMILY SSF54534 9 144 4.52E-35 T 13-10-2018 P40_17905 d0e65229dbced4fb0a70bbee2616d2cb 156 Gene3D G3DSA:2.40.10.330 74 130 2.4E-40 T 13-10-2018 P40_17905 d0e65229dbced4fb0a70bbee2616d2cb 156 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 9 141 5.6E-15 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain P40_17905 d0e65229dbced4fb0a70bbee2616d2cb 156 Gene3D G3DSA:3.10.50.40 16 142 2.4E-40 T 13-10-2018 P40_05285 5d807faadec90fac8d7f190d7ad69238 224 Pfam PF03922 OmpW family 24 224 8.5E-55 T 13-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 P40_05285 5d807faadec90fac8d7f190d7ad69238 224 Gene3D G3DSA:2.40.160.20 23 224 4.8E-64 T 13-10-2018 P40_05285 5d807faadec90fac8d7f190d7ad69238 224 SUPERFAMILY SSF56925 23 222 3.4E-28 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P40_15140 ec69930551bd7f59d54848a1623dd7b6 397 SMART SM00387 304 396 0.0054 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_15140 ec69930551bd7f59d54848a1623dd7b6 397 Gene3D G3DSA:3.30.565.10 265 380 1.6E-10 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_15140 ec69930551bd7f59d54848a1623dd7b6 397 SUPERFAMILY SSF55874 269 380 9.47E-14 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_15140 ec69930551bd7f59d54848a1623dd7b6 397 SUPERFAMILY SSF47384 201 253 5.49E-5 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_15140 ec69930551bd7f59d54848a1623dd7b6 397 Gene3D G3DSA:1.10.287.130 211 264 1.6E-10 T 13-10-2018 P40_19145 3240793a4a91683a60f3541cc5629007 160 Gene3D G3DSA:1.10.10.10 8 58 4.9E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_19145 3240793a4a91683a60f3541cc5629007 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 2.8E-21 T 13-10-2018 P40_19145 3240793a4a91683a60f3541cc5629007 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 2.5E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 P40_19145 3240793a4a91683a60f3541cc5629007 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 2.5E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 P40_19145 3240793a4a91683a60f3541cc5629007 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 2.5E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 P40_19145 3240793a4a91683a60f3541cc5629007 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site P40_19145 3240793a4a91683a60f3541cc5629007 160 SUPERFAMILY SSF54909 67 157 3.86E-22 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_19145 3240793a4a91683a60f3541cc5629007 160 Pfam PF01037 Lrp/AsnC ligand binding domain 73 148 2.0E-24 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain P40_19145 3240793a4a91683a60f3541cc5629007 160 SUPERFAMILY SSF46785 3 100 8.57E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_19145 3240793a4a91683a60f3541cc5629007 160 SMART SM00344 7 117 4.8E-43 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 P40_19145 3240793a4a91683a60f3541cc5629007 160 Gene3D G3DSA:3.30.70.920 60 145 5.1E-29 T 13-10-2018 P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 Gene3D G3DSA:3.30.420.40 3 319 1.7E-123 T 13-10-2018 P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 2.7E-130 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 Pfam PF00814 Glycoprotease family 24 311 9.0E-99 T 13-10-2018 IPR000905 Gcp-like domain P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 SUPERFAMILY SSF53067 102 313 3.89E-40 T 13-10-2018 P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 SUPERFAMILY SSF53067 3 123 1.55E-30 T 13-10-2018 P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 13-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 6.3E-116 T 13-10-2018 IPR017861 Kae1/TsaD family P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 Gene3D G3DSA:3.30.420.40 129 297 1.7E-123 T 13-10-2018 P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 336 63.291 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 2.2E-50 T 13-10-2018 IPR017861 Kae1/TsaD family P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 2.2E-50 T 13-10-2018 IPR017861 Kae1/TsaD family P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 2.2E-50 T 13-10-2018 IPR017861 Kae1/TsaD family P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 2.2E-50 T 13-10-2018 IPR017861 Kae1/TsaD family P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 2.2E-50 T 13-10-2018 IPR017861 Kae1/TsaD family P40_04600 e4ffb73b632d61075c7f274ef0a3c4c8 345 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 2.2E-50 T 13-10-2018 IPR017861 Kae1/TsaD family P40_09390 5f4d05fff8854ffab999aabb421ac80f 141 SUPERFAMILY SSF55729 10 138 4.01E-32 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_09390 5f4d05fff8854ffab999aabb421ac80f 141 Gene3D G3DSA:3.40.630.30 5 140 3.0E-36 T 13-10-2018 P40_09390 5f4d05fff8854ffab999aabb421ac80f 141 Pfam PF13673 Acetyltransferase (GNAT) domain 31 138 5.8E-22 T 13-10-2018 IPR000182 GNAT domain P40_12510 cc382b9a118b075df341fba16ee3e598 229 Gene3D G3DSA:3.30.70.1290 1 154 1.6E-22 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 P40_12510 cc382b9a118b075df341fba16ee3e598 229 Pfam PF01797 Transposase IS200 like 16 110 3.4E-6 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 P40_12510 cc382b9a118b075df341fba16ee3e598 229 SUPERFAMILY SSF143422 3 125 1.19E-16 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 P40_12510 cc382b9a118b075df341fba16ee3e598 229 SMART SM01321 9 125 2.0E-16 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 P40_07580 a6a3aefdff0a2926b693ffe06cfaec3a 231 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_07580 a6a3aefdff0a2926b693ffe06cfaec3a 231 Gene3D G3DSA:3.40.50.300 1 231 6.0E-60 T 13-10-2018 P40_07580 a6a3aefdff0a2926b693ffe06cfaec3a 231 SUPERFAMILY SSF52540 1 222 8.04E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07580 a6a3aefdff0a2926b693ffe06cfaec3a 231 SMART SM00382 26 208 0.0034 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_07580 a6a3aefdff0a2926b693ffe06cfaec3a 231 Pfam PF00005 ABC transporter 17 159 8.2E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_12280 e3f647124fc296291e2cb9e8a4b6bf7d 86 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 51 1.2E-12 T 13-10-2018 P40_12280 e3f647124fc296291e2cb9e8a4b6bf7d 86 Gene3D G3DSA:3.40.1620.10 3 49 6.8E-8 T 13-10-2018 P40_12280 e3f647124fc296291e2cb9e8a4b6bf7d 86 SUPERFAMILY SSF143120 1 76 2.75E-15 T 13-10-2018 IPR036165 YefM-like superfamily P40_12280 e3f647124fc296291e2cb9e8a4b6bf7d 86 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 63 6.0E-15 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM P40_00145 46a569eac987dce6490bca7ff0fbb241 432 Pfam PF03783 Curli production assembly/transport component CsgG 139 283 3.1E-11 T 13-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 P40_07890 4d738d8b3e34d041eb7e1c51cd60051b 252 SMART SM01007 21 202 4.8E-59 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal P40_07890 4d738d8b3e34d041eb7e1c51cd60051b 252 SUPERFAMILY SSF53639 12 231 1.08E-58 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily P40_07890 4d738d8b3e34d041eb7e1c51cd60051b 252 Gene3D G3DSA:3.40.225.10 7 252 2.3E-75 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily P40_07890 4d738d8b3e34d041eb7e1c51cd60051b 252 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 22 202 2.4E-43 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal P40_19560 c21f441a19a84cdcaaa0b7170a4adf6f 202 SUPERFAMILY SSF46689 15 93 6.8E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_19560 c21f441a19a84cdcaaa0b7170a4adf6f 202 Gene3D G3DSA:1.10.357.10 11 202 4.3E-28 T 13-10-2018 P40_19560 c21f441a19a84cdcaaa0b7170a4adf6f 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 73 2.7E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_02455 cc94b99637ce128a3cdb3863a096eb1f 567 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_02455 cc94b99637ce128a3cdb3863a096eb1f 567 Gene3D G3DSA:3.30.300.310 459 559 2.3E-33 T 13-10-2018 P40_02455 cc94b99637ce128a3cdb3863a096eb1f 567 SUPERFAMILY SSF56801 22 557 2.09E-163 T 13-10-2018 P40_02455 cc94b99637ce128a3cdb3863a096eb1f 567 Pfam PF00501 AMP-binding enzyme 30 462 6.5E-109 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_02455 cc94b99637ce128a3cdb3863a096eb1f 567 Gene3D G3DSA:3.40.50.12780 23 458 1.6E-123 T 13-10-2018 P40_02455 cc94b99637ce128a3cdb3863a096eb1f 567 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 546 2.2E-19 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_19500 758feb71640cf4a04f9a740a4abcdfe1 798 Pfam PF07660 Secretin and TonB N terminus short domain 70 110 2.2E-7 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 P40_19500 758feb71640cf4a04f9a740a4abcdfe1 798 SUPERFAMILY SSF56935 111 798 1.8E-100 T 13-10-2018 P40_19500 758feb71640cf4a04f9a740a4abcdfe1 798 Pfam PF07715 TonB-dependent Receptor Plug Domain 158 252 2.0E-12 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_19500 758feb71640cf4a04f9a740a4abcdfe1 798 SMART SM00965 61 112 6.9E-8 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 P40_19500 758feb71640cf4a04f9a740a4abcdfe1 798 Pfam PF00593 TonB dependent receptor 368 795 4.3E-35 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_19500 758feb71640cf4a04f9a740a4abcdfe1 798 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 159 798 1.6E-99 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 P40_19500 758feb71640cf4a04f9a740a4abcdfe1 798 Gene3D G3DSA:3.55.50.30 31 128 8.7E-19 T 13-10-2018 P40_19500 758feb71640cf4a04f9a740a4abcdfe1 798 Gene3D G3DSA:2.40.170.20 273 798 1.1E-73 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_19500 758feb71640cf4a04f9a740a4abcdfe1 798 Gene3D G3DSA:2.170.130.10 150 272 1.5E-21 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_01890 c9d473c48aa898e1b9c014affb325720 140 SUPERFAMILY SSF54593 1 124 1.07E-32 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_01890 c9d473c48aa898e1b9c014affb325720 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 117 3.0E-17 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain P40_01890 c9d473c48aa898e1b9c014affb325720 140 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 P40_01890 c9d473c48aa898e1b9c014affb325720 140 Gene3D G3DSA:3.10.180.10 1 125 3.1E-36 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_01990 49eda85673e1db5140a779d8cb101098 129 Gene3D G3DSA:3.10.450.50 1 129 2.1E-42 T 13-10-2018 P40_01990 49eda85673e1db5140a779d8cb101098 129 Pfam PF12680 SnoaL-like domain 8 101 8.0E-10 T 13-10-2018 IPR037401 SnoaL-like domain P40_01990 49eda85673e1db5140a779d8cb101098 129 SUPERFAMILY SSF54427 8 110 5.17E-18 T 13-10-2018 IPR032710 NTF2-like domain superfamily P40_17135 d60503c1d3206a7b1ba8d35c95744c1d 406 SUPERFAMILY SSF46785 329 378 2.87E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_17135 d60503c1d3206a7b1ba8d35c95744c1d 406 Gene3D G3DSA:1.10.10.10 330 376 5.9E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_17135 d60503c1d3206a7b1ba8d35c95744c1d 406 Gene3D G3DSA:1.10.10.10 213 315 9.6E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_16565 40087dc65630bcabd80eb05b81731b33 195 Gene3D G3DSA:2.102.10.10 43 187 6.3E-46 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_16565 40087dc65630bcabd80eb05b81731b33 195 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 2 40 4.1E-10 T 13-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 P40_16565 40087dc65630bcabd80eb05b81731b33 195 SUPERFAMILY SSF50022 30 186 6.25E-41 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_16565 40087dc65630bcabd80eb05b81731b33 195 Pfam PF00355 Rieske [2Fe-2S] domain 110 174 1.4E-11 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 P40_16565 40087dc65630bcabd80eb05b81731b33 195 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 187 3.0E-67 T 13-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 P40_16565 40087dc65630bcabd80eb05b81731b33 195 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 4.4E-6 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 P40_16565 40087dc65630bcabd80eb05b81731b33 195 PRINTS PR00162 Rieske 2Fe-2S subunit signature 146 158 4.4E-6 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 P40_16905 d10111ee585204dfcab8521625a6d3ba 484 Gene3D G3DSA:3.90.1300.10 1 483 1.1E-203 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_16905 d10111ee585204dfcab8521625a6d3ba 484 Pfam PF01425 Amidase 22 463 7.3E-161 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_16905 d10111ee585204dfcab8521625a6d3ba 484 SUPERFAMILY SSF75304 2 480 5.76E-166 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_16905 d10111ee585204dfcab8521625a6d3ba 484 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 474 92.531 T 13-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_16905 d10111ee585204dfcab8521625a6d3ba 484 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 11 473 4.3E-180 T 13-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_16905 d10111ee585204dfcab8521625a6d3ba 484 ProSitePatterns PS00571 Amidases signature. 149 180 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 P40_03585 a74d92153d2f6e73df05904b62e25807 342 SUPERFAMILY SSF52540 112 333 5.49E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03585 a74d92153d2f6e73df05904b62e25807 342 Gene3D G3DSA:3.40.50.300 101 273 8.8E-50 T 13-10-2018 P40_03585 a74d92153d2f6e73df05904b62e25807 342 Gene3D G3DSA:2.40.50.140 38 100 4.3E-22 T 13-10-2018 P40_03585 a74d92153d2f6e73df05904b62e25807 342 Pfam PF03193 RsgA GTPase 98 274 2.7E-54 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 P40_03585 a74d92153d2f6e73df05904b62e25807 342 Gene3D G3DSA:1.10.40.50 274 342 3.2E-18 T 13-10-2018 P40_03585 a74d92153d2f6e73df05904b62e25807 342 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 43 338 35.592 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 P40_03585 a74d92153d2f6e73df05904b62e25807 342 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 76 331 2.0E-74 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 P40_03585 a74d92153d2f6e73df05904b62e25807 342 SUPERFAMILY SSF50249 43 101 1.2E-6 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_07990 6d2b291d9e6c1074c49000e436b6090d 148 Pfam PF01047 MarR family 41 99 1.8E-16 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_07990 6d2b291d9e6c1074c49000e436b6090d 148 SUPERFAMILY SSF46785 9 147 1.99E-35 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_07990 6d2b291d9e6c1074c49000e436b6090d 148 SMART SM00347 34 129 1.4E-24 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_07990 6d2b291d9e6c1074c49000e436b6090d 148 Gene3D G3DSA:1.10.10.10 7 147 1.5E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_07990 6d2b291d9e6c1074c49000e436b6090d 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 9.1E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_07990 6d2b291d9e6c1074c49000e436b6090d 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 9.1E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_07990 6d2b291d9e6c1074c49000e436b6090d 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 9.1E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_10835 a7f2f1e2cc5e52688667b4f536f1059f 197 SUPERFAMILY SSF117916 106 188 4.36E-22 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily P40_10835 a7f2f1e2cc5e52688667b4f536f1059f 197 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 5 196 41.094 T 13-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 P40_10835 a7f2f1e2cc5e52688667b4f536f1059f 197 Pfam PF01106 NifU-like domain 116 182 1.8E-19 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 P40_10835 a7f2f1e2cc5e52688667b4f536f1059f 197 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 123 184 6.0E-22 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 P40_10835 a7f2f1e2cc5e52688667b4f536f1059f 197 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 99 2.8E-10 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 P40_10835 a7f2f1e2cc5e52688667b4f536f1059f 197 Gene3D G3DSA:3.30.300.130 110 196 1.3E-20 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily P40_10835 a7f2f1e2cc5e52688667b4f536f1059f 197 SUPERFAMILY SSF89360 5 99 7.46E-22 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 P40_10835 a7f2f1e2cc5e52688667b4f536f1059f 197 Gene3D G3DSA:2.60.300.12 1 99 3.6E-12 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 P40_10835 a7f2f1e2cc5e52688667b4f536f1059f 197 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 6 196 1.7E-94 T 13-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 P40_04370 95ff86e7815739c82e016eb6dcfb848e 123 Pfam PF04304 Protein of unknown function (DUF454) 5 118 1.7E-34 T 13-10-2018 IPR007401 Protein of unknown function DUF454 P40_04370 95ff86e7815739c82e016eb6dcfb848e 123 PIRSF PIRSF016789 3 122 4.2E-31 T 13-10-2018 IPR007401 Protein of unknown function DUF454 P40_19280 fd2b67db5c24e2b23753190c5eabf32f 115 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 19 110 6.8E-31 T 13-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 P40_19280 fd2b67db5c24e2b23753190c5eabf32f 115 Gene3D G3DSA:3.30.1360.20 18 114 1.3E-32 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 P40_19280 fd2b67db5c24e2b23753190c5eabf32f 115 SUPERFAMILY SSF55248 16 111 2.62E-33 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 P40_19280 fd2b67db5c24e2b23753190c5eabf32f 115 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 16 111 22.268 T 13-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 P40_13230 edc4d6f083da71fcfd74d03f1d55cd33 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 178 7.1E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_13230 edc4d6f083da71fcfd74d03f1d55cd33 237 Gene3D G3DSA:3.40.50.1000 6 205 1.3E-52 T 13-10-2018 IPR023214 HAD superfamily P40_13230 edc4d6f083da71fcfd74d03f1d55cd33 237 Gene3D G3DSA:1.10.150.240 18 84 1.3E-52 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 P40_13230 edc4d6f083da71fcfd74d03f1d55cd33 237 SUPERFAMILY SSF56784 3 213 2.98E-55 T 13-10-2018 IPR036412 HAD-like superfamily P40_13230 edc4d6f083da71fcfd74d03f1d55cd33 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 3.8E-32 T 13-10-2018 P40_13230 edc4d6f083da71fcfd74d03f1d55cd33 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 74 181 1.6E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_04750 de3a78fe64ed79bd05264820e1b7bffc 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 1.9E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_04750 de3a78fe64ed79bd05264820e1b7bffc 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 1.9E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_04750 de3a78fe64ed79bd05264820e1b7bffc 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 1.9E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_04750 de3a78fe64ed79bd05264820e1b7bffc 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 329 429 5.7E-14 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_04750 de3a78fe64ed79bd05264820e1b7bffc 441 Gene3D G3DSA:3.30.565.10 278 429 8.3E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_04750 de3a78fe64ed79bd05264820e1b7bffc 441 SUPERFAMILY SSF47384 212 277 7.65E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_04750 de3a78fe64ed79bd05264820e1b7bffc 441 SMART SM00387 325 430 3.9E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_04750 de3a78fe64ed79bd05264820e1b7bffc 441 SUPERFAMILY SSF55874 288 428 2.88E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_04750 de3a78fe64ed79bd05264820e1b7bffc 441 Gene3D G3DSA:1.10.287.130 192 277 5.0E-6 T 13-10-2018 P40_00370 702702e3d1bcce09e9d742bacfa89a59 134 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 130 20.521 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 P40_00370 702702e3d1bcce09e9d742bacfa89a59 134 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 3 127 2.0E-36 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 P40_00370 702702e3d1bcce09e9d742bacfa89a59 134 Gene3D G3DSA:3.30.420.140 1 129 2.2E-38 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 P40_00370 702702e3d1bcce09e9d742bacfa89a59 134 SUPERFAMILY SSF53098 2 127 3.19E-36 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_00370 702702e3d1bcce09e9d742bacfa89a59 134 Pfam PF03652 Holliday junction resolvase 2 127 1.2E-36 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 P40_00370 702702e3d1bcce09e9d742bacfa89a59 134 SMART SM00732 1 100 5.6E-32 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 P40_12825 d52cee3b2082c49a70cc3d10e8a4f2a0 288 Gene3D G3DSA:3.40.190.290 91 288 1.0E-49 T 13-10-2018 P40_12825 d52cee3b2082c49a70cc3d10e8a4f2a0 288 SUPERFAMILY SSF53850 86 286 7.17E-50 T 13-10-2018 P40_12825 d52cee3b2082c49a70cc3d10e8a4f2a0 288 Gene3D G3DSA:1.10.10.10 1 88 3.5E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_12825 d52cee3b2082c49a70cc3d10e8a4f2a0 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.4E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_12825 d52cee3b2082c49a70cc3d10e8a4f2a0 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.4E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_12825 d52cee3b2082c49a70cc3d10e8a4f2a0 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.4E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_12825 d52cee3b2082c49a70cc3d10e8a4f2a0 288 SUPERFAMILY SSF46785 1 111 1.71E-28 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_12825 d52cee3b2082c49a70cc3d10e8a4f2a0 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-23 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_12825 d52cee3b2082c49a70cc3d10e8a4f2a0 288 Pfam PF03466 LysR substrate binding domain 87 285 2.7E-52 T 13-10-2018 IPR005119 LysR, substrate-binding P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 Gene3D G3DSA:3.30.980.10 550 687 5.8E-51 T 13-10-2018 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 844 0.0 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 Pfam PF01411 tRNA synthetases class II (A) 5 543 3.7E-223 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 Gene3D G3DSA:2.40.30.130 461 540 1.0E-10 T 13-10-2018 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 SMART SM00863 641 686 1.1E-18 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 Gene3D G3DSA:3.30.54.20 612 667 5.8E-51 T 13-10-2018 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 Gene3D G3DSA:3.30.930.10 1 240 9.6E-117 T 13-10-2018 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 Pfam PF02272 DHHA1 domain 729 860 2.4E-26 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 865 199.461 T 13-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 SUPERFAMILY SSF101353 244 452 1.7E-60 T 13-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 SUPERFAMILY SSF50447 443 540 8.83E-19 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 197 208 2.5E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 2.5E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 294 307 2.5E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 224 237 2.5E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 270 286 2.5E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 Gene3D G3DSA:3.10.310.40 754 862 1.5E-31 T 13-10-2018 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 SUPERFAMILY SSF55681 2 243 7.7E-110 T 13-10-2018 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 SUPERFAMILY SSF55186 540 699 3.01E-50 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 P40_14365 b8c1a7aba06c124c8a1c4b3b6b394cce 865 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 641 686 8.4E-17 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 P40_02850 f9448fab1aa103b6509966aea977fb9e 513 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 263 508 1.7E-95 T 13-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase P40_02850 f9448fab1aa103b6509966aea977fb9e 513 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 187 4.1E-48 T 13-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices P40_20925 ec14d926e7d8ac78a30396f87cac718e 300 Pfam PF12833 Helix-turn-helix domain 221 295 5.8E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_20925 ec14d926e7d8ac78a30396f87cac718e 300 Pfam PF02311 AraC-like ligand binding domain 53 158 4.4E-18 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 P40_20925 ec14d926e7d8ac78a30396f87cac718e 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 278 294 9.8E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_20925 ec14d926e7d8ac78a30396f87cac718e 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 278 9.8E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_20925 ec14d926e7d8ac78a30396f87cac718e 300 Gene3D G3DSA:1.10.10.60 190 300 4.2E-26 T 13-10-2018 P40_20925 ec14d926e7d8ac78a30396f87cac718e 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 248 290 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 P40_20925 ec14d926e7d8ac78a30396f87cac718e 300 SUPERFAMILY SSF46689 198 242 2.82E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_20925 ec14d926e7d8ac78a30396f87cac718e 300 SMART SM00342 210 294 4.8E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_20925 ec14d926e7d8ac78a30396f87cac718e 300 SUPERFAMILY SSF46689 248 296 8.96E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_20925 ec14d926e7d8ac78a30396f87cac718e 300 Gene3D G3DSA:2.60.120.280 55 189 7.6E-11 T 13-10-2018 P40_20925 ec14d926e7d8ac78a30396f87cac718e 300 SUPERFAMILY SSF51215 33 179 3.79E-29 T 13-10-2018 IPR037923 Transcription regulator HTH-like P40_19630 a9522bc04fc75c9ab473bd7888c5abba 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 P40_19630 a9522bc04fc75c9ab473bd7888c5abba 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 106 5.1E-38 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 P40_19630 a9522bc04fc75c9ab473bd7888c5abba 108 SUPERFAMILY SSF52833 3 107 1.3E-40 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_19630 a9522bc04fc75c9ab473bd7888c5abba 108 Pfam PF00085 Thioredoxin 5 105 1.6E-34 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 P40_19630 a9522bc04fc75c9ab473bd7888c5abba 108 PRINTS PR00421 Thioredoxin family signature 72 83 9.5E-10 T 13-10-2018 P40_19630 a9522bc04fc75c9ab473bd7888c5abba 108 PRINTS PR00421 Thioredoxin family signature 24 32 9.5E-10 T 13-10-2018 P40_19630 a9522bc04fc75c9ab473bd7888c5abba 108 PRINTS PR00421 Thioredoxin family signature 32 41 9.5E-10 T 13-10-2018 P40_19630 a9522bc04fc75c9ab473bd7888c5abba 108 Gene3D G3DSA:3.40.30.10 1 107 2.0E-36 T 13-10-2018 P40_19630 a9522bc04fc75c9ab473bd7888c5abba 108 PIRSF PIRSF000077 2 108 1.2E-43 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 P40_05520 dabd5164e7afeb539404c49446e046e3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 6.7E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05520 dabd5164e7afeb539404c49446e046e3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.7E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05520 dabd5164e7afeb539404c49446e046e3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.7E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05520 dabd5164e7afeb539404c49446e046e3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 6.7E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05520 dabd5164e7afeb539404c49446e046e3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 6.7E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05520 dabd5164e7afeb539404c49446e046e3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.7E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05520 dabd5164e7afeb539404c49446e046e3 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 195 1.3E-4 T 13-10-2018 P40_05520 dabd5164e7afeb539404c49446e046e3 258 Pfam PF00106 short chain dehydrogenase 6 193 1.2E-58 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05520 dabd5164e7afeb539404c49446e046e3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05520 dabd5164e7afeb539404c49446e046e3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05520 dabd5164e7afeb539404c49446e046e3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05520 dabd5164e7afeb539404c49446e046e3 258 Gene3D G3DSA:3.40.50.720 1 258 1.0E-84 T 13-10-2018 P40_05520 dabd5164e7afeb539404c49446e046e3 258 SUPERFAMILY SSF51735 1 257 3.86E-77 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_05520 dabd5164e7afeb539404c49446e046e3 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_08390 1ca5b54338f21ef40cc9df24cc4deccc 101 SUPERFAMILY SSF47413 40 97 2.67E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_08390 1ca5b54338f21ef40cc9df24cc4deccc 101 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 14 99 2.9E-34 T 13-10-2018 IPR014057 Uncharacterized protein HI1420 P40_13900 a425a779c1c7a1aa255de5b9ba20c480 247 Gene3D G3DSA:1.10.10.2560 133 229 2.6E-65 T 13-10-2018 P40_13900 a425a779c1c7a1aa255de5b9ba20c480 247 Gene3D G3DSA:3.40.50.150 18 239 2.6E-65 T 13-10-2018 P40_13900 a425a779c1c7a1aa255de5b9ba20c480 247 Pfam PF08241 Methyltransferase domain 40 128 8.4E-18 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 P40_13900 a425a779c1c7a1aa255de5b9ba20c480 247 SUPERFAMILY SSF53335 11 244 2.92E-26 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_12040 a0b6d1f73266ee123ea2550d58e1f246 337 Pfam PF00107 Zinc-binding dehydrogenase 171 296 1.8E-25 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 P40_12040 a0b6d1f73266ee123ea2550d58e1f246 337 SUPERFAMILY SSF50129 4 159 8.37E-41 T 13-10-2018 IPR011032 GroES-like superfamily P40_12040 a0b6d1f73266ee123ea2550d58e1f246 337 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 56 70 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 P40_12040 a0b6d1f73266ee123ea2550d58e1f246 337 Gene3D G3DSA:3.40.50.720 144 283 6.1E-101 T 13-10-2018 P40_12040 a0b6d1f73266ee123ea2550d58e1f246 337 SUPERFAMILY SSF51735 134 305 3.56E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_12040 a0b6d1f73266ee123ea2550d58e1f246 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 14 125 4.1E-32 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P40_12040 a0b6d1f73266ee123ea2550d58e1f246 337 SMART SM00829 1 333 1.4E-6 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P40_12040 a0b6d1f73266ee123ea2550d58e1f246 337 Gene3D G3DSA:3.90.180.10 6 326 6.1E-101 T 13-10-2018 P40_18955 cc6f736adb4337447c51e1897ee9f6a1 450 SUPERFAMILY SSF56176 3 216 9.81E-44 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 P40_18955 cc6f736adb4337447c51e1897ee9f6a1 450 Gene3D G3DSA:3.30.465.40 21 238 1.0E-35 T 13-10-2018 P40_18955 cc6f736adb4337447c51e1897ee9f6a1 450 Pfam PF01565 FAD binding domain 49 177 2.0E-28 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 P40_18955 cc6f736adb4337447c51e1897ee9f6a1 450 SUPERFAMILY SSF55103 222 444 2.45E-8 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 P40_07275 794c984fd5253a601d72a26ae708c955 592 Gene3D G3DSA:3.20.20.70 1 467 4.9E-172 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_07275 794c984fd5253a601d72a26ae708c955 592 Pfam PF02436 Conserved carboxylase domain 294 487 5.4E-57 T 13-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 P40_07275 794c984fd5253a601d72a26ae708c955 592 Pfam PF00364 Biotin-requiring enzyme 527 590 7.8E-19 T 13-10-2018 IPR000089 Biotin/lipoyl attachment P40_07275 794c984fd5253a601d72a26ae708c955 592 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 547 564 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_07275 794c984fd5253a601d72a26ae708c955 592 Pfam PF00682 HMGL-like 8 272 5.7E-61 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 P40_07275 794c984fd5253a601d72a26ae708c955 592 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 9 587 1.4E-261 T 13-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 P40_07275 794c984fd5253a601d72a26ae708c955 592 SUPERFAMILY SSF89000 299 456 2.79E-49 T 13-10-2018 P40_07275 794c984fd5253a601d72a26ae708c955 592 SUPERFAMILY SSF51230 522 590 4.19E-20 T 13-10-2018 IPR011053 Single hybrid motif P40_07275 794c984fd5253a601d72a26ae708c955 592 Gene3D G3DSA:2.40.50.100 525 591 1.6E-22 T 13-10-2018 P40_07275 794c984fd5253a601d72a26ae708c955 592 SUPERFAMILY SSF51569 2 301 1.59E-89 T 13-10-2018 P40_04700 9007e4a4f1c47cecc7744a40fb781884 264 SUPERFAMILY SSF103481 193 262 1.7E-6 T 13-10-2018 P40_04700 9007e4a4f1c47cecc7744a40fb781884 264 SUPERFAMILY SSF103481 44 130 1.7E-8 T 13-10-2018 P40_04700 9007e4a4f1c47cecc7744a40fb781884 264 Pfam PF00892 EamA-like transporter family 161 262 1.7E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_04700 9007e4a4f1c47cecc7744a40fb781884 264 Pfam PF00892 EamA-like transporter family 15 130 3.2E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_14090 fee3d29c3c7293442762793b4206bc44 205 Pfam PF01323 DSBA-like thioredoxin domain 5 197 2.5E-30 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 P40_14090 fee3d29c3c7293442762793b4206bc44 205 Gene3D G3DSA:3.40.30.10 5 203 1.8E-49 T 13-10-2018 P40_14090 fee3d29c3c7293442762793b4206bc44 205 SUPERFAMILY SSF52833 5 201 1.86E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_14090 fee3d29c3c7293442762793b4206bc44 205 PIRSF PIRSF006386 1 205 1.1E-47 T 13-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 P40_02635 3d2205827ed858e95b9d0f1fc658c8c3 362 PIRSF PIRSF000524 6 362 9.2E-42 T 13-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 P40_02635 3d2205827ed858e95b9d0f1fc658c8c3 362 Pfam PF00266 Aminotransferase class-V 10 298 8.4E-11 T 13-10-2018 IPR000192 Aminotransferase class V domain P40_02635 3d2205827ed858e95b9d0f1fc658c8c3 362 Gene3D G3DSA:3.40.640.10 26 258 7.9E-118 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_02635 3d2205827ed858e95b9d0f1fc658c8c3 362 Gene3D G3DSA:3.90.1150.10 259 357 7.9E-118 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_02635 3d2205827ed858e95b9d0f1fc658c8c3 362 SUPERFAMILY SSF53383 6 360 4.84E-72 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_17530 b193f06396118af554411618be3f6c1b 142 SUPERFAMILY SSF54427 5 126 1.24E-18 T 13-10-2018 IPR032710 NTF2-like domain superfamily P40_17530 b193f06396118af554411618be3f6c1b 142 Gene3D G3DSA:3.10.450.50 1 125 1.2E-24 T 13-10-2018 P40_17530 b193f06396118af554411618be3f6c1b 142 Pfam PF12680 SnoaL-like domain 13 120 3.7E-11 T 13-10-2018 IPR037401 SnoaL-like domain P40_16595 aa37b79415378ab7c0ef8aeb04bc26fd 234 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 52 221 2.0E-19 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain P40_16595 aa37b79415378ab7c0ef8aeb04bc26fd 234 Gene3D G3DSA:3.40.50.1110 48 233 3.5E-22 T 13-10-2018 IPR036514 SGNH hydrolase superfamily P40_16595 aa37b79415378ab7c0ef8aeb04bc26fd 234 SUPERFAMILY SSF52266 47 231 8.18E-28 T 13-10-2018 P40_04595 e64b6d3f5a453c0380d707eec1e9c068 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 3.0E-15 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_04595 e64b6d3f5a453c0380d707eec1e9c068 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 3.0E-15 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_04595 e64b6d3f5a453c0380d707eec1e9c068 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 3.0E-15 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_04595 e64b6d3f5a453c0380d707eec1e9c068 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 3.0E-15 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_04595 e64b6d3f5a453c0380d707eec1e9c068 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 1.0E-9 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_04595 e64b6d3f5a453c0380d707eec1e9c068 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 13-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_04595 e64b6d3f5a453c0380d707eec1e9c068 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 5.6E-24 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_04595 e64b6d3f5a453c0380d707eec1e9c068 71 Gene3D G3DSA:1.20.5.1150 16 54 6.3E-20 T 13-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_04595 e64b6d3f5a453c0380d707eec1e9c068 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.472 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_04595 e64b6d3f5a453c0380d707eec1e9c068 71 Pfam PF01165 Ribosomal protein S21 3 56 7.9E-23 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_16515 736fd65ed2dc0faa83f85db3b466b0f0 196 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 188 5.5E-64 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 P40_16515 736fd65ed2dc0faa83f85db3b466b0f0 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 192 37.762 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 P40_16515 736fd65ed2dc0faa83f85db3b466b0f0 196 Pfam PF13580 SIS domain 18 146 7.8E-36 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 P40_16515 736fd65ed2dc0faa83f85db3b466b0f0 196 Gene3D G3DSA:3.40.50.10490 1 196 4.7E-75 T 13-10-2018 P40_16515 736fd65ed2dc0faa83f85db3b466b0f0 196 SUPERFAMILY SSF53697 4 193 4.45E-58 T 13-10-2018 P40_18240 ede04902c2cee5b62a5d2e263fb745bd 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 5.2E-59 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 P40_18240 ede04902c2cee5b62a5d2e263fb745bd 274 Gene3D G3DSA:4.10.950.10 196 274 1.4E-35 T 13-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18240 ede04902c2cee5b62a5d2e263fb745bd 274 Gene3D G3DSA:2.40.50.140 1 114 1.5E-48 T 13-10-2018 P40_18240 ede04902c2cee5b62a5d2e263fb745bd 274 SUPERFAMILY SSF50249 2 125 8.23E-49 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_18240 ede04902c2cee5b62a5d2e263fb745bd 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 2.2E-131 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 P40_18240 ede04902c2cee5b62a5d2e263fb745bd 274 PIRSF PIRSF002158 11 274 5.1E-107 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18240 ede04902c2cee5b62a5d2e263fb745bd 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 13-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18240 ede04902c2cee5b62a5d2e263fb745bd 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.1E-34 T 13-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18240 ede04902c2cee5b62a5d2e263fb745bd 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.977 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 P40_18240 ede04902c2cee5b62a5d2e263fb745bd 274 SMART SM01383 42 118 4.2E-46 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18240 ede04902c2cee5b62a5d2e263fb745bd 274 Gene3D G3DSA:2.30.30.30 115 195 8.4E-35 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 P40_18240 ede04902c2cee5b62a5d2e263fb745bd 274 SMART SM01382 124 252 1.4E-97 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 P40_18240 ede04902c2cee5b62a5d2e263fb745bd 274 SUPERFAMILY SSF50104 126 272 3.67E-63 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily P40_10875 e2c2f77516173ea4479036ad2f522f08 221 Pfam PF13649 Methyltransferase domain 78 168 1.3E-7 T 13-10-2018 P40_10875 e2c2f77516173ea4479036ad2f522f08 221 Gene3D G3DSA:3.40.50.150 32 210 6.5E-21 T 13-10-2018 P40_10875 e2c2f77516173ea4479036ad2f522f08 221 SUPERFAMILY SSF53335 62 182 1.14E-19 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_08190 1e608bb7052e48dd225a9a0bb8a8cfc2 146 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 136 9.873 T 13-10-2018 IPR022907 VapC family GO:0004540 P40_08190 1e608bb7052e48dd225a9a0bb8a8cfc2 146 SUPERFAMILY SSF88723 1 137 3.64E-27 T 13-10-2018 IPR029060 PIN-like domain superfamily P40_08190 1e608bb7052e48dd225a9a0bb8a8cfc2 146 Gene3D G3DSA:3.40.50.1010 1 139 1.2E-38 T 13-10-2018 P40_08190 1e608bb7052e48dd225a9a0bb8a8cfc2 146 Pfam PF01850 PIN domain 3 122 4.7E-11 T 13-10-2018 IPR002716 PIN domain P40_16760 b66a7195c543442833adc386890cc0e0 420 Gene3D G3DSA:3.65.10.10 6 415 6.0E-170 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 P40_16760 b66a7195c543442833adc386890cc0e0 420 Gene3D G3DSA:3.65.10.10 21 231 6.0E-170 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 P40_16760 b66a7195c543442833adc386890cc0e0 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 417 2.2E-177 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_16760 b66a7195c543442833adc386890cc0e0 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 44.667 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_16760 b66a7195c543442833adc386890cc0e0 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 408 9.5E-117 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 P40_16760 b66a7195c543442833adc386890cc0e0 420 SUPERFAMILY SSF55205 1 418 2.62E-143 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 P40_17875 2c3d3470b369ca3ec384349d66d245f3 988 SUPERFAMILY SSF50998 457 826 7.06E-8 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily P40_17875 2c3d3470b369ca3ec384349d66d245f3 988 Gene3D G3DSA:2.130.10.10 453 786 1.6E-7 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_17875 2c3d3470b369ca3ec384349d66d245f3 988 Pfam PF13519 von Willebrand factor type A domain 47 131 3.8E-8 T 13-10-2018 IPR002035 von Willebrand factor, type A P40_17875 2c3d3470b369ca3ec384349d66d245f3 988 Pfam PF05567 Neisseria PilC beta-propeller domain 478 731 4.1E-20 T 13-10-2018 IPR008707 PilC beta-propeller domain P40_17875 2c3d3470b369ca3ec384349d66d245f3 988 SUPERFAMILY SSF53300 36 145 3.71E-13 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily P40_09045 b1a9c1a0284b4884557eaba369ad5a97 419 Pfam PF07804 HipA-like C-terminal domain 149 388 3.0E-47 T 13-10-2018 IPR012893 HipA-like, C-terminal P40_09045 b1a9c1a0284b4884557eaba369ad5a97 419 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 14 114 5.1E-12 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 P40_09045 b1a9c1a0284b4884557eaba369ad5a97 419 Pfam PF13657 HipA N-terminal domain 16 115 5.3E-17 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 P40_00840 f17895b0a3348a701f25477ebcfc0416 409 Gene3D G3DSA:3.30.1540.10 239 338 1.9E-119 T 13-10-2018 P40_00840 f17895b0a3348a701f25477ebcfc0416 409 Gene3D G3DSA:3.40.50.10540 14 401 1.9E-119 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_00840 f17895b0a3348a701f25477ebcfc0416 409 SUPERFAMILY SSF89796 11 409 2.88E-117 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_00840 f17895b0a3348a701f25477ebcfc0416 409 Pfam PF02515 CoA-transferase family III 15 385 4.0E-113 T 13-10-2018 IPR003673 CoA-transferase family III GO:0003824 P40_14825 f887054fa63e2ea60faa4d7692d8256d 164 TIGRFAM TIGR00608 radc: DNA repair protein RadC 34 164 3.2E-41 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 P40_14825 f887054fa63e2ea60faa4d7692d8256d 164 SUPERFAMILY SSF102712 50 134 1.16E-6 T 13-10-2018 P40_14825 f887054fa63e2ea60faa4d7692d8256d 164 Gene3D G3DSA:3.40.140.10 40 164 7.0E-41 T 13-10-2018 P40_14825 f887054fa63e2ea60faa4d7692d8256d 164 Pfam PF04002 RadC-like JAB domain 44 162 2.7E-40 T 13-10-2018 IPR025657 RadC-like JAB domain P40_14825 f887054fa63e2ea60faa4d7692d8256d 164 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 113 118 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site P40_16555 8757bd6258b2ff6e8cfff877a50fa93b 218 SUPERFAMILY SSF46626 26 182 6.06E-44 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_16555 8757bd6258b2ff6e8cfff877a50fa93b 218 Gene3D G3DSA:1.10.760.10 24 183 1.0E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_16555 8757bd6258b2ff6e8cfff877a50fa93b 218 Pfam PF02167 Cytochrome C1 family 32 217 4.2E-21 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 P40_08175 276665612efb8f49b6995a44437d0d6c 628 Pfam PF01757 Acyltransferase family 7 321 7.9E-30 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 P40_08175 276665612efb8f49b6995a44437d0d6c 628 SUPERFAMILY SSF52266 425 620 2.98E-7 T 13-10-2018 P40_08175 276665612efb8f49b6995a44437d0d6c 628 Gene3D G3DSA:3.40.50.1110 409 612 2.5E-6 T 13-10-2018 IPR036514 SGNH hydrolase superfamily P40_03605 3438d33ae25d22e3c0bbcc09d4da2dcc 348 Pfam PF08331 Domain of unknown function (DUF1730) 58 137 6.1E-24 T 13-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 P40_03605 3438d33ae25d22e3c0bbcc09d4da2dcc 348 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 11 345 3.2E-153 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 P40_03605 3438d33ae25d22e3c0bbcc09d4da2dcc 348 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 190 201 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P40_03605 3438d33ae25d22e3c0bbcc09d4da2dcc 348 Pfam PF13484 4Fe-4S double cluster binding domain 189 253 1.8E-18 T 13-10-2018 P40_03605 3438d33ae25d22e3c0bbcc09d4da2dcc 348 SUPERFAMILY SSF46548 136 253 3.4E-20 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P40_03605 3438d33ae25d22e3c0bbcc09d4da2dcc 348 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 312 49.365 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 P40_20450 4c777e6bc16e85d9c8c7f4736d616567 369 Gene3D G3DSA:3.40.190.170 14 337 1.0E-59 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_20450 4c777e6bc16e85d9c8c7f4736d616567 369 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 19 288 1.8E-14 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_12320 a51f4d5bdedc6ae56edc84825ab121ed 303 Gene3D G3DSA:3.60.15.10 1 303 2.4E-93 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_12320 a51f4d5bdedc6ae56edc84825ab121ed 303 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 3 303 6.0E-129 T 13-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B P40_12320 a51f4d5bdedc6ae56edc84825ab121ed 303 Pfam PF12706 Beta-lactamase superfamily domain 50 270 4.9E-47 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_12320 a51f4d5bdedc6ae56edc84825ab121ed 303 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 303 168.263 T 13-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B P40_12320 a51f4d5bdedc6ae56edc84825ab121ed 303 SUPERFAMILY SSF56281 1 303 6.09E-65 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_11110 b6b74ab311078f28972211dfd8c79fc1 280 SMART SM00382 25 183 1.5E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_11110 b6b74ab311078f28972211dfd8c79fc1 280 SUPERFAMILY SSF52540 7 255 6.23E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_11110 b6b74ab311078f28972211dfd8c79fc1 280 Pfam PF07728 AAA domain (dynein-related subfamily) 29 171 6.2E-14 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 P40_11110 b6b74ab311078f28972211dfd8c79fc1 280 Gene3D G3DSA:3.40.50.300 10 190 3.1E-29 T 13-10-2018 P40_05775 ad51a466fb77945e5026e07eac31df06 302 Pfam PF01545 Cation efflux family 19 208 6.3E-45 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 P40_05775 ad51a466fb77945e5026e07eac31df06 302 Gene3D G3DSA:1.20.1510.10 13 208 1.4E-45 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_05775 ad51a466fb77945e5026e07eac31df06 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 14 289 9.9E-69 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 P40_05775 ad51a466fb77945e5026e07eac31df06 302 SUPERFAMILY SSF160240 215 287 1.83E-7 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 P40_05775 ad51a466fb77945e5026e07eac31df06 302 SUPERFAMILY SSF161111 14 208 1.83E-52 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_05830 f6d368ec980a123e685d8981a640fb5b 270 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 210 2.4E-26 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 P40_05830 f6d368ec980a123e685d8981a640fb5b 270 SUPERFAMILY SSF51735 1 266 5.75E-55 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_05830 f6d368ec980a123e685d8981a640fb5b 270 Gene3D G3DSA:3.40.50.720 1 269 4.6E-56 T 13-10-2018 P40_15110 f98b650081e83420169a401515be47cc 200 Gene3D G3DSA:2.40.50.140 1 66 3.0E-26 T 13-10-2018 P40_15110 f98b650081e83420169a401515be47cc 200 Gene3D G3DSA:1.10.8.10 151 198 3.1E-10 T 13-10-2018 P40_15110 f98b650081e83420169a401515be47cc 200 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 198 1.0E-52 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 P40_15110 f98b650081e83420169a401515be47cc 200 SUPERFAMILY SSF47781 66 135 1.11E-21 T 13-10-2018 IPR010994 RuvA domain 2-like P40_15110 f98b650081e83420169a401515be47cc 200 Gene3D G3DSA:1.10.150.20 67 139 3.2E-27 T 13-10-2018 P40_15110 f98b650081e83420169a401515be47cc 200 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 199 30.67 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 P40_15110 f98b650081e83420169a401515be47cc 200 Pfam PF14520 Helix-hairpin-helix domain 72 128 8.4E-17 T 13-10-2018 P40_15110 f98b650081e83420169a401515be47cc 200 SUPERFAMILY SSF50249 1 63 1.77E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_15110 f98b650081e83420169a401515be47cc 200 SUPERFAMILY SSF46929 153 199 4.58E-8 T 13-10-2018 IPR036267 RuvA, C-terminal domain superfamily P40_15110 f98b650081e83420169a401515be47cc 200 SMART SM00278 108 127 0.024 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 P40_15110 f98b650081e83420169a401515be47cc 200 SMART SM00278 73 92 0.17 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 P40_15110 f98b650081e83420169a401515be47cc 200 Pfam PF07499 RuvA, C-terminal domain 154 198 2.3E-11 T 13-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 P40_15110 f98b650081e83420169a401515be47cc 200 Pfam PF01330 RuvA N terminal domain 1 62 3.7E-20 T 13-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 SUPERFAMILY SSF81271 6 62 4.14E-12 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 SUPERFAMILY SSF55186 64 242 1.83E-63 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 633 2.6E-211 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 Gene3D G3DSA:3.30.930.10 224 533 1.9E-125 T 13-10-2018 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 SUPERFAMILY SSF52954 529 631 1.81E-26 T 13-10-2018 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 170 220 2.9E-13 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 Pfam PF03129 Anticodon binding domain 544 630 9.2E-19 T 13-10-2018 IPR004154 Anticodon-binding P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 Gene3D G3DSA:3.40.50.800 534 636 3.0E-25 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 Pfam PF02824 TGS domain 7 62 5.2E-8 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 Gene3D G3DSA:3.10.20.30 2 63 7.5E-15 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 Gene3D G3DSA:3.30.980.10 70 223 2.2E-62 T 13-10-2018 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 SMART SM00863 170 220 1.4E-23 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 530 8.1E-41 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 636 33.354 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 SUPERFAMILY SSF55681 244 528 4.4E-98 T 13-10-2018 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 536 548 6.0E-51 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 6.0E-51 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 6.0E-51 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 466 494 6.0E-51 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 509 522 6.0E-51 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 P40_04245 60f180df5c08fbace3b74b9b943cc6dc 638 Gene3D G3DSA:3.30.54.20 131 187 2.2E-62 T 13-10-2018 P40_15900 660f4b43da2b3fc6b98e457f3cf97376 682 Pfam PF00448 SRP54-type protein, GTPase domain 155 350 8.9E-25 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P40_15900 660f4b43da2b3fc6b98e457f3cf97376 682 Gene3D G3DSA:3.40.50.300 148 339 6.1E-42 T 13-10-2018 P40_15900 660f4b43da2b3fc6b98e457f3cf97376 682 SUPERFAMILY SSF52540 152 342 1.55E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_15900 660f4b43da2b3fc6b98e457f3cf97376 682 Gene3D G3DSA:1.20.120.1380 123 341 6.1E-42 T 13-10-2018 P40_15900 660f4b43da2b3fc6b98e457f3cf97376 682 SMART SM00962 153 351 2.0E-26 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P40_15900 660f4b43da2b3fc6b98e457f3cf97376 682 SMART SM00382 152 322 1.4E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_01540 2c4657fd6b538b1dcdd3ec37fb546f71 187 Pfam PF04542 Sigma-70 region 2 22 87 1.1E-10 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_01540 2c4657fd6b538b1dcdd3ec37fb546f71 187 Gene3D G3DSA:1.10.1740.10 12 83 3.5E-7 T 13-10-2018 P40_01540 2c4657fd6b538b1dcdd3ec37fb546f71 187 Gene3D G3DSA:1.10.10.10 84 179 3.9E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_01540 2c4657fd6b538b1dcdd3ec37fb546f71 187 SUPERFAMILY SSF88659 118 177 6.92E-14 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_01540 2c4657fd6b538b1dcdd3ec37fb546f71 187 Pfam PF08281 Sigma-70, region 4 126 173 5.2E-17 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_01540 2c4657fd6b538b1dcdd3ec37fb546f71 187 SUPERFAMILY SSF88946 16 83 3.65E-12 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_01540 2c4657fd6b538b1dcdd3ec37fb546f71 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 175 1.8E-19 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_06110 c5862a55cddc765920d89aa0c175ef35 66 ProDom PD067169 MB2294 RV2271/MT2332 10 49 1.0E-5 T 13-10-2018 IPR024248 Protein of unknown function DUF2695 P40_06110 c5862a55cddc765920d89aa0c175ef35 66 Pfam PF10905 Protein of unknown function (DUF2695) 7 46 1.3E-12 T 13-10-2018 IPR024248 Protein of unknown function DUF2695 P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 455 71.683 T 13-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 PRINTS PR00149 Fumarate lyase superfamily signature 310 326 2.2E-27 T 13-10-2018 IPR000362 Fumarate lyase family P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 PRINTS PR00149 Fumarate lyase superfamily signature 127 145 2.2E-27 T 13-10-2018 IPR000362 Fumarate lyase family P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 PRINTS PR00149 Fumarate lyase superfamily signature 264 291 2.2E-27 T 13-10-2018 IPR000362 Fumarate lyase family P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 PRINTS PR00149 Fumarate lyase superfamily signature 173 191 2.2E-27 T 13-10-2018 IPR000362 Fumarate lyase family P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 Pfam PF10415 Fumarase C C-terminus 401 454 1.4E-19 T 13-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 Pfam PF00206 Lyase 12 335 2.9E-92 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 ProSitePatterns PS00163 Fumarate lyases signature. 310 319 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 SUPERFAMILY SSF48557 5 456 5.81E-132 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 PRINTS PR00145 Argininosuccinate lyase family signature 310 326 1.7E-6 T 13-10-2018 P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 PRINTS PR00145 Argininosuccinate lyase family signature 126 148 1.7E-6 T 13-10-2018 P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 PRINTS PR00145 Argininosuccinate lyase family signature 168 188 1.7E-6 T 13-10-2018 P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 Gene3D G3DSA:1.10.275.10 5 131 1.8E-50 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 Gene3D G3DSA:1.20.200.10 132 398 9.7E-94 T 13-10-2018 P40_21670 e61e013790e686f4e9597d4c42cac3ec 460 Gene3D G3DSA:1.10.40.30 401 460 6.1E-22 T 13-10-2018 P40_09250 24f2d95bff89ae5177fc4fb4991faf30 263 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 1 257 46.716 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 P40_09250 24f2d95bff89ae5177fc4fb4991faf30 263 Pfam PF00793 DAHP synthetase I family 2 255 4.7E-72 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 P40_09250 24f2d95bff89ae5177fc4fb4991faf30 263 SUPERFAMILY SSF51569 2 258 6.14E-98 T 13-10-2018 P40_09250 24f2d95bff89ae5177fc4fb4991faf30 263 Gene3D G3DSA:3.20.20.70 1 262 7.9E-94 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_09250 24f2d95bff89ae5177fc4fb4991faf30 263 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 2 255 3.5E-115 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 P40_04845 56f2373bccf1463e16171ac0d082f9d6 189 Pfam PF04191 Phospholipid methyltransferase 105 171 4.5E-9 T 13-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 P40_04845 56f2373bccf1463e16171ac0d082f9d6 189 Gene3D G3DSA:1.20.120.1630 1 185 2.5E-31 T 13-10-2018 P40_14465 9f5ad8b5b17e5268e4e714bb9fed80d2 316 Gene3D G3DSA:3.30.360.10 115 292 1.6E-51 T 13-10-2018 P40_14465 9f5ad8b5b17e5268e4e714bb9fed80d2 316 Gene3D G3DSA:3.40.50.720 40 310 1.6E-51 T 13-10-2018 P40_14465 9f5ad8b5b17e5268e4e714bb9fed80d2 316 SUPERFAMILY SSF51735 1 137 8.11E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_14465 9f5ad8b5b17e5268e4e714bb9fed80d2 316 SUPERFAMILY SSF55347 116 288 6.93E-36 T 13-10-2018 P40_14465 9f5ad8b5b17e5268e4e714bb9fed80d2 316 SMART SM00859 4 105 1.5E-15 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 P40_14465 9f5ad8b5b17e5268e4e714bb9fed80d2 316 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 43 99 4.8E-10 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 P40_14465 9f5ad8b5b17e5268e4e714bb9fed80d2 316 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 2 307 1.5E-133 T 13-10-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 P40_14465 9f5ad8b5b17e5268e4e714bb9fed80d2 316 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 307 50.598 T 13-10-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 P40_03735 73c8cf0c932e724bc95f7bdd03d77c70 150 Gene3D G3DSA:3.10.430.100 61 148 5.7E-27 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily P40_03735 73c8cf0c932e724bc95f7bdd03d77c70 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 2.0E-49 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_03735 73c8cf0c932e724bc95f7bdd03d77c70 150 SUPERFAMILY SSF55658 1 57 2.79E-18 T 13-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal P40_03735 73c8cf0c932e724bc95f7bdd03d77c70 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 2.5E-26 T 13-10-2018 IPR020069 Ribosomal protein L9, C-terminal P40_03735 73c8cf0c932e724bc95f7bdd03d77c70 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.707 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_03735 73c8cf0c932e724bc95f7bdd03d77c70 150 Gene3D G3DSA:3.40.5.10 1 50 1.1E-22 T 13-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03735 73c8cf0c932e724bc95f7bdd03d77c70 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 2.1E-22 T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03735 73c8cf0c932e724bc95f7bdd03d77c70 150 SUPERFAMILY SSF55653 56 148 1.44E-24 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily P40_03735 73c8cf0c932e724bc95f7bdd03d77c70 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_08305 21b510bbc3c26fc6d9b9be9a966f6df0 658 Gene3D G3DSA:3.40.50.720 151 272 1.1E-29 T 13-10-2018 P40_08305 21b510bbc3c26fc6d9b9be9a966f6df0 658 Pfam PF13727 CoA-binding domain 74 246 1.5E-12 T 13-10-2018 P40_08305 21b510bbc3c26fc6d9b9be9a966f6df0 658 SUPERFAMILY SSF51735 153 277 1.22E-16 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_08305 21b510bbc3c26fc6d9b9be9a966f6df0 658 Gene3D G3DSA:3.40.50.720 286 617 1.1E-110 T 13-10-2018 P40_08305 21b510bbc3c26fc6d9b9be9a966f6df0 658 SUPERFAMILY SSF51735 289 623 3.33E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_08305 21b510bbc3c26fc6d9b9be9a966f6df0 658 Pfam PF02719 Polysaccharide biosynthesis protein 291 584 1.8E-119 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain P40_21645 fa3319e2186598d61867c4de82ca7529 446 Gene3D G3DSA:1.10.285.10 5 383 3.3E-152 T 13-10-2018 P40_21645 fa3319e2186598d61867c4de82ca7529 446 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 444 1.6E-81 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 P40_21645 fa3319e2186598d61867c4de82ca7529 446 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 55 182 1.5E-47 T 13-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 P40_21645 fa3319e2186598d61867c4de82ca7529 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 112 126 7.0E-29 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 P40_21645 fa3319e2186598d61867c4de82ca7529 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 7.0E-29 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 P40_21645 fa3319e2186598d61867c4de82ca7529 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 7.0E-29 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 P40_21645 fa3319e2186598d61867c4de82ca7529 446 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 371 382 7.0E-29 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 P40_21645 fa3319e2186598d61867c4de82ca7529 446 SUPERFAMILY SSF53223 6 195 1.15E-65 T 13-10-2018 P40_21645 fa3319e2186598d61867c4de82ca7529 446 SMART SM00839 203 444 4.1E-85 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 P40_21645 fa3319e2186598d61867c4de82ca7529 446 Gene3D G3DSA:3.40.50.10860 53 188 3.3E-152 T 13-10-2018 P40_21645 fa3319e2186598d61867c4de82ca7529 446 PIRSF PIRSF000185 24 446 3.9E-115 T 13-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 P40_21645 fa3319e2186598d61867c4de82ca7529 446 Gene3D G3DSA:3.40.50.720 208 372 3.3E-152 T 13-10-2018 P40_21645 fa3319e2186598d61867c4de82ca7529 446 SUPERFAMILY SSF51735 201 445 3.13E-71 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_21645 fa3319e2186598d61867c4de82ca7529 446 Gene3D G3DSA:1.10.285.10 393 446 1.1E-7 T 13-10-2018 P40_03800 8e7d97d090acf104e1c4f2569640b140 231 Pfam PF07681 DoxX 26 111 1.8E-22 T 13-10-2018 IPR032808 DoxX family P40_02525 428aa8cb68259fe1a6525d9d6593071d 129 SMART SM00363 5 71 8.5E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_02525 428aa8cb68259fe1a6525d9d6593071d 129 PIRSF PIRSF016821 2 128 1.1E-43 T 13-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 P40_02525 428aa8cb68259fe1a6525d9d6593071d 129 Gene3D G3DSA:3.10.290.10 1 104 4.0E-38 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 P40_02525 428aa8cb68259fe1a6525d9d6593071d 129 Pfam PF01479 S4 domain 6 51 1.1E-12 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_02525 428aa8cb68259fe1a6525d9d6593071d 129 SUPERFAMILY SSF55174 5 99 9.42E-28 T 13-10-2018 P40_19830 a2e292b5ecd8bf4d40bbc2d20e5b892e 267 SUPERFAMILY SSF53213 4 252 1.96E-76 T 13-10-2018 P40_19830 a2e292b5ecd8bf4d40bbc2d20e5b892e 267 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 29 243 1.7E-35 T 13-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 P40_19830 a2e292b5ecd8bf4d40bbc2d20e5b892e 267 Gene3D G3DSA:3.40.830.10 3 263 5.2E-78 T 13-10-2018 P40_19830 a2e292b5ecd8bf4d40bbc2d20e5b892e 267 PIRSF PIRSF006157 1 265 3.2E-75 T 13-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 P40_13365 750ca9c15d7565a3fbd9b41492cf791a 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 5.8E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_13365 750ca9c15d7565a3fbd9b41492cf791a 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 5.8E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_13365 750ca9c15d7565a3fbd9b41492cf791a 216 SUPERFAMILY SSF46689 15 88 1.44E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_13365 750ca9c15d7565a3fbd9b41492cf791a 216 Gene3D G3DSA:1.10.357.10 11 215 1.1E-51 T 13-10-2018 P40_13365 750ca9c15d7565a3fbd9b41492cf791a 216 SUPERFAMILY SSF48498 99 209 2.6E-12 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_13365 750ca9c15d7565a3fbd9b41492cf791a 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 4.7E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 40.172 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 3.7E-84 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 3.7E-84 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.7E-84 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 3.7E-84 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.7E-84 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 3.7E-84 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 3.7E-84 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 3.7E-84 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 3.7E-84 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 PIRSF PIRSF000724 1 387 2.5E-138 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 13-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 SUPERFAMILY SSF53748 2 382 1.15E-148 T 13-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 Pfam PF00162 Phosphoglycerate kinase 6 373 1.1E-145 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 Gene3D G3DSA:3.40.50.1260 165 373 2.9E-157 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01285 b7107fa2201a50ce83f7c89697ef59e5 387 Gene3D G3DSA:3.40.50.1260 10 379 2.9E-157 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_16340 233b039295821c5ab02c0b2135197390 346 Pfam PF16868 NMT1-like family 56 339 2.0E-73 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_16340 233b039295821c5ab02c0b2135197390 346 Gene3D G3DSA:3.40.190.10 56 339 5.6E-88 T 13-10-2018 P40_16340 233b039295821c5ab02c0b2135197390 346 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 3 339 2.0E-87 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_16340 233b039295821c5ab02c0b2135197390 346 Gene3D G3DSA:3.40.190.10 139 279 5.6E-88 T 13-10-2018 P40_16340 233b039295821c5ab02c0b2135197390 346 SUPERFAMILY SSF53850 51 339 8.52E-66 T 13-10-2018 P40_05965 5f187f1e4b67d3b42bd28bdbf6eb2489 485 Pfam PF13226 Domain of unknown function (DUF4034) 61 173 6.7E-6 T 13-10-2018 IPR025115 Domain of unknown function DUF4034 P40_05965 5f187f1e4b67d3b42bd28bdbf6eb2489 485 Gene3D G3DSA:1.25.40.10 95 438 2.0E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05965 5f187f1e4b67d3b42bd28bdbf6eb2489 485 SMART SM00671 342 378 4.6E-4 T 13-10-2018 IPR006597 Sel1-like repeat P40_05965 5f187f1e4b67d3b42bd28bdbf6eb2489 485 SUPERFAMILY SSF81901 309 435 7.19E-10 T 13-10-2018 P40_13690 5df49d17fb160a7a4f2792081fe52281 213 SUPERFAMILY SSF53474 3 213 4.61E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_13690 5df49d17fb160a7a4f2792081fe52281 213 Pfam PF12146 Serine aminopeptidase, S33 10 124 2.1E-6 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 P40_13690 5df49d17fb160a7a4f2792081fe52281 213 Gene3D G3DSA:3.40.50.1820 10 209 3.7E-30 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_10295 381779c74857007ceeddc283ee927daf 131 SUPERFAMILY SSF88723 3 124 1.26E-17 T 13-10-2018 IPR029060 PIN-like domain superfamily P40_10295 381779c74857007ceeddc283ee927daf 131 Pfam PF01850 PIN domain 5 117 5.4E-8 T 13-10-2018 IPR002716 PIN domain P40_10295 381779c74857007ceeddc283ee927daf 131 Gene3D G3DSA:3.40.50.1010 2 127 1.1E-5 T 13-10-2018 P40_20940 bfe8c5762831f2209556f0f9c6819e50 383 SUPERFAMILY SSF47203 225 379 1.14E-58 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_20940 bfe8c5762831f2209556f0f9c6819e50 383 Gene3D G3DSA:2.40.110.10 120 232 4.0E-41 T 13-10-2018 P40_20940 bfe8c5762831f2209556f0f9c6819e50 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.5E-25 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_20940 bfe8c5762831f2209556f0f9c6819e50 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 9.6E-30 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_20940 bfe8c5762831f2209556f0f9c6819e50 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 1.2E-46 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_20940 bfe8c5762831f2209556f0f9c6819e50 383 SUPERFAMILY SSF56645 2 240 2.49E-78 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_20940 bfe8c5762831f2209556f0f9c6819e50 383 Gene3D G3DSA:1.20.140.10 233 380 1.3E-53 T 13-10-2018 P40_20940 bfe8c5762831f2209556f0f9c6819e50 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_20940 bfe8c5762831f2209556f0f9c6819e50 383 Gene3D G3DSA:1.10.540.10 1 118 1.2E-38 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_20940 bfe8c5762831f2209556f0f9c6819e50 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_20940 bfe8c5762831f2209556f0f9c6819e50 383 PIRSF PIRSF016578 4 380 1.4E-28 T 13-10-2018 P40_09815 afe28565f4998cabf90c9ece10bbcb3e 287 Pfam PF00106 short chain dehydrogenase 7 199 2.9E-49 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09815 afe28565f4998cabf90c9ece10bbcb3e 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.0E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09815 afe28565f4998cabf90c9ece10bbcb3e 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.0E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09815 afe28565f4998cabf90c9ece10bbcb3e 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.0E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09815 afe28565f4998cabf90c9ece10bbcb3e 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.0E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09815 afe28565f4998cabf90c9ece10bbcb3e 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.0E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09815 afe28565f4998cabf90c9ece10bbcb3e 287 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_09815 afe28565f4998cabf90c9ece10bbcb3e 287 Gene3D G3DSA:3.40.50.720 1 276 2.4E-69 T 13-10-2018 P40_09815 afe28565f4998cabf90c9ece10bbcb3e 287 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 0.0052 T 13-10-2018 P40_09815 afe28565f4998cabf90c9ece10bbcb3e 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.6E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09815 afe28565f4998cabf90c9ece10bbcb3e 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.6E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09815 afe28565f4998cabf90c9ece10bbcb3e 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.6E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09815 afe28565f4998cabf90c9ece10bbcb3e 287 SUPERFAMILY SSF51735 1 275 8.1E-65 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_16240 3a8440bf96b292fb3e0a1c14802ca38b 388 SUPERFAMILY SSF53850 31 329 2.38E-43 T 13-10-2018 P40_16240 3a8440bf96b292fb3e0a1c14802ca38b 388 Pfam PF16868 NMT1-like family 72 327 2.1E-12 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_16240 3a8440bf96b292fb3e0a1c14802ca38b 388 Gene3D G3DSA:3.40.190.10 39 327 9.2E-37 T 13-10-2018 P40_16240 3a8440bf96b292fb3e0a1c14802ca38b 388 Gene3D G3DSA:3.40.190.10 121 263 9.2E-37 T 13-10-2018 P40_16240 3a8440bf96b292fb3e0a1c14802ca38b 388 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 7 327 9.7E-51 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_06355 ebdd27f83c40e3fcea436940e042d158 234 SUPERFAMILY SSF52317 36 212 4.13E-38 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_06355 ebdd27f83c40e3fcea436940e042d158 234 Gene3D G3DSA:3.40.50.880 1 229 9.6E-49 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_06355 ebdd27f83c40e3fcea436940e042d158 234 Pfam PF00117 Glutamine amidotransferase class-I 44 182 2.1E-13 T 13-10-2018 IPR017926 Glutamine amidotransferase P40_01100 95385c6b7c4fe8a103af5f1c5ee74cc3 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 48.472 T 13-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 P40_01100 95385c6b7c4fe8a103af5f1c5ee74cc3 200 Pfam PF01725 Ham1 family 4 192 6.4E-56 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 P40_01100 95385c6b7c4fe8a103af5f1c5ee74cc3 200 Gene3D G3DSA:3.90.950.10 1 198 5.4E-77 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like P40_01100 95385c6b7c4fe8a103af5f1c5ee74cc3 200 SUPERFAMILY SSF52972 1 196 7.85E-73 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like P40_01100 95385c6b7c4fe8a103af5f1c5ee74cc3 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 194 5.2E-56 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 P40_18690 e0f4fdd7285a963be7b836270bff9ac6 166 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 9.0E-28 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 P40_18690 e0f4fdd7285a963be7b836270bff9ac6 166 Pfam PF03840 Preprotein translocase SecG subunit 4 72 8.2E-23 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 P40_18690 e0f4fdd7285a963be7b836270bff9ac6 166 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 9.0E-39 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 P40_18690 e0f4fdd7285a963be7b836270bff9ac6 166 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 9.0E-39 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 P40_18690 e0f4fdd7285a963be7b836270bff9ac6 166 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 9.0E-39 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 P40_18690 e0f4fdd7285a963be7b836270bff9ac6 166 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 9.0E-39 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 P40_02890 39aba2bb9df4d2370228aac43e7ee58c 367 Gene3D G3DSA:1.10.287.130 137 195 1.0E-12 T 13-10-2018 P40_02890 39aba2bb9df4d2370228aac43e7ee58c 367 Gene3D G3DSA:3.30.450.20 2 116 1.3E-20 T 13-10-2018 P40_02890 39aba2bb9df4d2370228aac43e7ee58c 367 Pfam PF00989 PAS fold 9 104 9.7E-10 T 13-10-2018 IPR013767 PAS fold GO:0006355 P40_02890 39aba2bb9df4d2370228aac43e7ee58c 367 SUPERFAMILY SSF47384 125 191 2.16E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_02890 39aba2bb9df4d2370228aac43e7ee58c 367 Gene3D G3DSA:3.30.565.10 196 355 9.6E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_02890 39aba2bb9df4d2370228aac43e7ee58c 367 Pfam PF00512 His Kinase A (phospho-acceptor) domain 135 190 2.6E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_02890 39aba2bb9df4d2370228aac43e7ee58c 367 SUPERFAMILY SSF55785 9 103 1.74E-9 T 13-10-2018 IPR035965 PAS domain superfamily P40_02890 39aba2bb9df4d2370228aac43e7ee58c 367 SUPERFAMILY SSF55874 201 354 7.2E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_02890 39aba2bb9df4d2370228aac43e7ee58c 367 SMART SM00387 237 356 2.6E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_02890 39aba2bb9df4d2370228aac43e7ee58c 367 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 238 354 1.5E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_02890 39aba2bb9df4d2370228aac43e7ee58c 367 SMART SM00388 133 198 3.1E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_02890 39aba2bb9df4d2370228aac43e7ee58c 367 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 302 2.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_02890 39aba2bb9df4d2370228aac43e7ee58c 367 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 335 2.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_02890 39aba2bb9df4d2370228aac43e7ee58c 367 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 353 2.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_10815 b32c62fab8bb492b0b00c1cb5deb8a2b 167 Pfam PF06073 Bacterial protein of unknown function (DUF934) 56 162 1.3E-41 T 13-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 P40_10815 b32c62fab8bb492b0b00c1cb5deb8a2b 167 PIRSF PIRSF030820 1 167 1.2E-55 T 13-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 P40_05430 f19eac5c0e54e2a6ebb09d2e3845f86b 957 SMART SM00487 151 368 3.2E-13 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_05430 f19eac5c0e54e2a6ebb09d2e3845f86b 957 SMART SM00490 510 593 8.2E-11 T 13-10-2018 IPR001650 Helicase, C-terminal P40_05430 f19eac5c0e54e2a6ebb09d2e3845f86b 957 Gene3D G3DSA:3.40.50.300 439 625 6.8E-36 T 13-10-2018 P40_05430 f19eac5c0e54e2a6ebb09d2e3845f86b 957 Gene3D G3DSA:2.30.30.140 2 54 1.4E-23 T 13-10-2018 P40_05430 f19eac5c0e54e2a6ebb09d2e3845f86b 957 Pfam PF12137 RNA polymerase recycling family C-terminal 597 954 2.5E-137 T 13-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 P40_05430 f19eac5c0e54e2a6ebb09d2e3845f86b 957 Gene3D G3DSA:3.30.360.80 705 775 5.9E-27 T 13-10-2018 P40_05430 f19eac5c0e54e2a6ebb09d2e3845f86b 957 Gene3D G3DSA:3.40.50.10810 151 438 7.6E-82 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily P40_05430 f19eac5c0e54e2a6ebb09d2e3845f86b 957 SUPERFAMILY SSF52540 143 378 1.61E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_05430 f19eac5c0e54e2a6ebb09d2e3845f86b 957 Gene3D G3DSA:2.30.30.930 56 115 4.2E-6 T 13-10-2018 P40_05430 f19eac5c0e54e2a6ebb09d2e3845f86b 957 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 2 956 26.979 T 13-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 P40_05430 f19eac5c0e54e2a6ebb09d2e3845f86b 957 Pfam PF00271 Helicase conserved C-terminal domain 486 593 2.0E-12 T 13-10-2018 IPR001650 Helicase, C-terminal P40_05430 f19eac5c0e54e2a6ebb09d2e3845f86b 957 Pfam PF00176 SNF2 family N-terminal domain 175 366 3.1E-14 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 P40_05430 f19eac5c0e54e2a6ebb09d2e3845f86b 957 SUPERFAMILY SSF52540 295 632 2.06E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_05115 9dfe125da1462df5bb4d27ee68d158a7 124 Gene3D G3DSA:3.30.460.10 3 118 2.8E-38 T 13-10-2018 P40_05115 9dfe125da1462df5bb4d27ee68d158a7 124 SUPERFAMILY SSF81301 6 111 3.27E-39 T 13-10-2018 P40_05115 9dfe125da1462df5bb4d27ee68d158a7 124 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 105 4.8E-38 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS P40_05115 9dfe125da1462df5bb4d27ee68d158a7 124 Pfam PF02410 Ribosomal silencing factor during starvation 11 105 3.4E-27 T 13-10-2018 P40_05115 9dfe125da1462df5bb4d27ee68d158a7 124 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 106 25.865 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS P40_07385 68546d0b0913c7fc595618d9033b0152 216 Gene3D G3DSA:3.40.30.10 5 199 5.6E-51 T 13-10-2018 P40_07385 68546d0b0913c7fc595618d9033b0152 216 Gene3D G3DSA:1.20.1050.10 80 196 5.6E-51 T 13-10-2018 P40_07385 68546d0b0913c7fc595618d9033b0152 216 SUPERFAMILY SSF47616 76 205 1.39E-26 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_07385 68546d0b0913c7fc595618d9033b0152 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 78 3.5E-21 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_07385 68546d0b0913c7fc595618d9033b0152 216 SUPERFAMILY SSF52833 1 100 1.06E-25 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_07385 68546d0b0913c7fc595618d9033b0152 216 Pfam PF14497 Glutathione S-transferase, C-terminal domain 119 197 1.3E-12 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal P40_18160 7b995f492a16e4cb0016f963fed09b56 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.4E-47 T 13-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18160 7b995f492a16e4cb0016f963fed09b56 144 Gene3D G3DSA:3.100.10.10 71 144 3.4E-13 T 13-10-2018 P40_18160 7b995f492a16e4cb0016f963fed09b56 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 13-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18160 7b995f492a16e4cb0016f963fed09b56 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 6.4E-30 T 13-10-2018 IPR021131 Ribosomal protein L18e/L15P P40_18160 7b995f492a16e4cb0016f963fed09b56 144 SUPERFAMILY SSF52080 4 143 1.01E-44 T 13-10-2018 IPR036227 Ribosomal L18e/L15P superfamily P40_18160 7b995f492a16e4cb0016f963fed09b56 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.831 T 13-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 P40_11955 7be62f3da2c6e6b1b5ff010ec73de9a4 310 Gene3D G3DSA:1.20.120.1460 238 309 1.9E-19 T 13-10-2018 P40_11955 7be62f3da2c6e6b1b5ff010ec73de9a4 310 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 310 43.039 T 13-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 P40_11955 7be62f3da2c6e6b1b5ff010ec73de9a4 310 Gene3D G3DSA:3.20.20.70 1 234 3.0E-73 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_11955 7be62f3da2c6e6b1b5ff010ec73de9a4 310 SUPERFAMILY SSF51395 1 291 1.83E-68 T 13-10-2018 P40_11955 7be62f3da2c6e6b1b5ff010ec73de9a4 310 PIRSF PIRSF006621 1 310 5.5E-71 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 P40_11955 7be62f3da2c6e6b1b5ff010ec73de9a4 310 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 77 95 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 P40_11955 7be62f3da2c6e6b1b5ff010ec73de9a4 310 Pfam PF01207 Dihydrouridine synthase (Dus) 1 301 5.7E-80 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 P40_11955 7be62f3da2c6e6b1b5ff010ec73de9a4 310 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 309 1.9E-120 T 13-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 P40_07045 370c647065a57755050757089af04114 499 SUPERFAMILY SSF50249 17 148 4.41E-35 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_07045 370c647065a57755050757089af04114 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 237 250 3.2E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 P40_07045 370c647065a57755050757089af04114 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 208 224 3.2E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 P40_07045 370c647065a57755050757089af04114 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 255 272 3.2E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 P40_07045 370c647065a57755050757089af04114 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 379 395 3.2E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 P40_07045 370c647065a57755050757089af04114 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 192 202 3.2E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 P40_07045 370c647065a57755050757089af04114 499 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 494 4.7E-80 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_07045 370c647065a57755050757089af04114 499 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 497 4.5E-199 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 P40_07045 370c647065a57755050757089af04114 499 Gene3D G3DSA:2.40.50.140 12 147 1.0E-27 T 13-10-2018 P40_07045 370c647065a57755050757089af04114 499 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 497 43.174 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 P40_07045 370c647065a57755050757089af04114 499 Gene3D G3DSA:3.30.930.10 148 494 4.9E-131 T 13-10-2018 P40_07045 370c647065a57755050757089af04114 499 SUPERFAMILY SSF55681 155 495 2.11E-120 T 13-10-2018 P40_07045 370c647065a57755050757089af04114 499 Pfam PF01336 OB-fold nucleic acid binding domain 83 138 4.2E-7 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 279 288 6.1E-16 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 252 271 6.1E-16 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 216 225 6.1E-16 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 165 175 6.1E-16 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 345 353 6.1E-16 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 188 195 6.1E-16 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 Pfam PF12838 4Fe-4S dicluster domain 14 57 1.9E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 PIRSF PIRSF000361 70 391 7.0E-68 T 13-10-2018 IPR015701 Ferredoxin--NADP reductase GO:0016491|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 Pfam PF00175 Oxidoreductase NAD-binding domain 253 359 1.6E-14 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 Gene3D G3DSA:3.30.70.20 7 75 9.8E-13 T 13-10-2018 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 SUPERFAMILY SSF54862 8 63 7.43E-20 T 13-10-2018 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 43 54 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 Pfam PF00970 Oxidoreductase FAD-binding domain 183 239 6.0E-6 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 PIRSF PIRSF501177 1 391 5.9E-185 T 13-10-2018 IPR017634 Benzoyl-CoA oxygenase/reductase, BoxA protein KEGG: 00362+1.14.13.208|MetaCyc: PWY-1361 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 Gene3D G3DSA:2.40.30.10 103 237 9.8E-36 T 13-10-2018 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 Gene3D G3DSA:3.40.50.80 238 391 7.4E-35 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 TIGRFAM TIGR03224 benzo_boxA: benzoyl-CoA oxygenase/reductase, BoxA protein 4 391 1.0E-170 T 13-10-2018 IPR017634 Benzoyl-CoA oxygenase/reductase, BoxA protein KEGG: 00362+1.14.13.208|MetaCyc: PWY-1361 P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 SUPERFAMILY SSF63380 120 245 9.48E-34 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel P40_10385 767a7e24d3df836712b18eaad5dc0a8a 391 SUPERFAMILY SSF52343 240 391 1.44E-32 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 Gene3D G3DSA:1.10.287.950 216 518 1.3E-74 T 13-10-2018 P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 SMART SM00283 269 516 2.0E-67 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 SUPERFAMILY SSF47170 28 178 4.32E-18 T 13-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 SMART SM00304 216 268 7.0E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 484 7.1E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 8.1E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 63 78 8.1E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 8.1E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 8.1E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 8.1E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 192 212 8.1E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 8.1E-56 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 Gene3D G3DSA:1.20.120.30 25 152 1.0E-11 T 13-10-2018 P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 Pfam PF00672 HAMP domain 218 261 2.0E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 SUPERFAMILY SSF58104 236 519 5.49E-61 T 13-10-2018 P40_14320 f2943e0984a9b53eff5fb27460e4d885 550 Pfam PF02203 Tar ligand binding domain homologue 16 149 4.2E-20 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 P40_19570 365aa066658b41fa5b11c35dc993cdbc 237 Pfam PF04340 Protein of unknown function, DUF484 8 222 2.2E-55 T 13-10-2018 IPR007435 Protein of unknown function DUF484 P40_19570 365aa066658b41fa5b11c35dc993cdbc 237 Gene3D G3DSA:3.30.450.40 41 227 2.8E-50 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_17240 c8aaa67d110707314c0d619f7f1726dc 628 Pfam PF02355 Protein export membrane protein 444 605 1.3E-19 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial P40_17240 c8aaa67d110707314c0d619f7f1726dc 628 SUPERFAMILY SSF82866 421 618 7.59E-43 T 13-10-2018 P40_17240 c8aaa67d110707314c0d619f7f1726dc 628 Gene3D G3DSA:3.30.1360.200 280 442 5.4E-48 T 13-10-2018 P40_17240 c8aaa67d110707314c0d619f7f1726dc 628 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 125 612 7.1E-143 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 P40_17240 c8aaa67d110707314c0d619f7f1726dc 628 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 627 47.814 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 P40_17240 c8aaa67d110707314c0d619f7f1726dc 628 Gene3D G3DSA:3.30.70.3400 223 443 5.4E-48 T 13-10-2018 P40_17240 c8aaa67d110707314c0d619f7f1726dc 628 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 350 605 6.3E-76 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P40_17240 c8aaa67d110707314c0d619f7f1726dc 628 Pfam PF13721 SecD export protein N-terminal TM region 2 105 1.7E-28 T 13-10-2018 IPR027398 SecD export protein N-terminal TM domain P40_17240 c8aaa67d110707314c0d619f7f1726dc 628 Gene3D G3DSA:3.30.70.3400 125 202 8.1E-6 T 13-10-2018 P40_17240 c8aaa67d110707314c0d619f7f1726dc 628 Gene3D G3DSA:1.20.1640.10 444 625 8.1E-9 T 13-10-2018 P40_17240 c8aaa67d110707314c0d619f7f1726dc 628 Pfam PF07549 SecD/SecF GG Motif 117 143 2.6E-8 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site P40_00005 e58c57872824d4459e19928b666483ff 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 228 242 1.8E-52 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like P40_00005 e58c57872824d4459e19928b666483ff 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 424 443 1.8E-52 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like P40_00005 e58c57872824d4459e19928b666483ff 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 262 289 1.8E-52 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like P40_00005 e58c57872824d4459e19928b666483ff 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 164 184 1.8E-52 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like P40_00005 e58c57872824d4459e19928b666483ff 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 196 210 1.8E-52 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like P40_00005 e58c57872824d4459e19928b666483ff 466 Gene3D G3DSA:1.10.1750.10 373 466 3.9E-36 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 P40_00005 e58c57872824d4459e19928b666483ff 466 SMART SM00760 374 443 3.4E-42 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 P40_00005 e58c57872824d4459e19928b666483ff 466 Pfam PF11638 DnaA N-terminal domain 4 65 1.1E-19 T 13-10-2018 IPR024633 DnaA N-terminal domain P40_00005 e58c57872824d4459e19928b666483ff 466 Pfam PF00308 Bacterial dnaA protein 130 347 4.9E-95 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA P40_00005 e58c57872824d4459e19928b666483ff 466 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 464 1.4E-182 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 P40_00005 e58c57872824d4459e19928b666483ff 466 ProSitePatterns PS01008 DnaA protein signature. 424 443 - T 13-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 P40_00005 e58c57872824d4459e19928b666483ff 466 SUPERFAMILY SSF52540 130 342 4.61E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_00005 e58c57872824d4459e19928b666483ff 466 Gene3D G3DSA:3.30.300.180 2 110 6.9E-31 T 13-10-2018 IPR038454 DnaA, N-terminal domain superfamily P40_00005 e58c57872824d4459e19928b666483ff 466 Gene3D G3DSA:3.40.50.300 122 295 5.4E-49 T 13-10-2018 P40_00005 e58c57872824d4459e19928b666483ff 466 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 375 443 1.4E-30 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 P40_00005 e58c57872824d4459e19928b666483ff 466 SMART SM00382 163 293 6.5E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_00005 e58c57872824d4459e19928b666483ff 466 SUPERFAMILY SSF48295 362 465 1.99E-36 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 P40_00005 e58c57872824d4459e19928b666483ff 466 Gene3D G3DSA:1.10.8.60 297 367 3.2E-24 T 13-10-2018 P40_00005 e58c57872824d4459e19928b666483ff 466 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 465 33.65 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 P40_12865 94a42c130c943577d330656563c6dfb3 398 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 10 137 5.7E-14 T 13-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 P40_12865 94a42c130c943577d330656563c6dfb3 398 SUPERFAMILY SSF51735 10 158 3.15E-11 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_12865 94a42c130c943577d330656563c6dfb3 398 Gene3D G3DSA:3.40.50.720 8 164 1.1E-34 T 13-10-2018 P40_04720 eded85c642358aaad3f4c7de89ce7f06 437 SUPERFAMILY SSF103473 31 428 4.05E-35 T 13-10-2018 IPR036259 MFS transporter superfamily P40_04720 eded85c642358aaad3f4c7de89ce7f06 437 Gene3D G3DSA:1.20.1250.20 27 436 3.9E-34 T 13-10-2018 P40_04720 eded85c642358aaad3f4c7de89ce7f06 437 Pfam PF07690 Major Facilitator Superfamily 72 398 5.0E-17 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_21175 067fb9f0c254de4692131fd9be696f77 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 7.3E-16 T 13-10-2018 P40_21175 067fb9f0c254de4692131fd9be696f77 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 7.3E-16 T 13-10-2018 P40_21175 067fb9f0c254de4692131fd9be696f77 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 7.3E-16 T 13-10-2018 P40_21175 067fb9f0c254de4692131fd9be696f77 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 357 372 7.3E-16 T 13-10-2018 P40_21175 067fb9f0c254de4692131fd9be696f77 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 169 7.3E-16 T 13-10-2018 P40_21175 067fb9f0c254de4692131fd9be696f77 382 Gene3D G3DSA:3.50.50.60 5 278 1.0E-84 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_21175 067fb9f0c254de4692131fd9be696f77 382 Gene3D G3DSA:3.50.50.60 107 242 1.0E-84 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_21175 067fb9f0c254de4692131fd9be696f77 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 3.1E-19 T 13-10-2018 P40_21175 067fb9f0c254de4692131fd9be696f77 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 3.1E-19 T 13-10-2018 P40_21175 067fb9f0c254de4692131fd9be696f77 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.1E-19 T 13-10-2018 P40_21175 067fb9f0c254de4692131fd9be696f77 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 3.1E-19 T 13-10-2018 P40_21175 067fb9f0c254de4692131fd9be696f77 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 3.1E-19 T 13-10-2018 P40_21175 067fb9f0c254de4692131fd9be696f77 382 SUPERFAMILY SSF51905 144 302 9.85E-26 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_21175 067fb9f0c254de4692131fd9be696f77 382 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 277 2.4E-48 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_21175 067fb9f0c254de4692131fd9be696f77 382 Gene3D G3DSA:3.30.390.120 314 377 4.1E-27 T 13-10-2018 P40_21175 067fb9f0c254de4692131fd9be696f77 382 SUPERFAMILY SSF51905 2 186 1.36E-35 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_20265 818b1b7b6fbb6c67662d0614a973b733 322 Gene3D G3DSA:3.40.50.720 98 287 2.4E-117 T 13-10-2018 P40_20265 818b1b7b6fbb6c67662d0614a973b733 322 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 27 319 1.5E-26 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 P40_20265 818b1b7b6fbb6c67662d0614a973b733 322 SUPERFAMILY SSF52283 17 137 1.98E-28 T 13-10-2018 P40_20265 818b1b7b6fbb6c67662d0614a973b733 322 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site P40_20265 818b1b7b6fbb6c67662d0614a973b733 322 Gene3D G3DSA:3.40.50.720 24 317 2.4E-117 T 13-10-2018 P40_20265 818b1b7b6fbb6c67662d0614a973b733 322 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 288 9.8E-55 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 P40_20265 818b1b7b6fbb6c67662d0614a973b733 322 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site P40_20265 818b1b7b6fbb6c67662d0614a973b733 322 SUPERFAMILY SSF51735 102 289 1.63E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_02725 a90c873995f3f80b981db995f73c5a89 213 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 210 2.6E-64 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 P40_02725 a90c873995f3f80b981db995f73c5a89 213 SUPERFAMILY SSF52317 4 211 2.96E-54 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_02725 a90c873995f3f80b981db995f73c5a89 213 PIRSF PIRSF000495 3 213 1.7E-67 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 P40_02725 a90c873995f3f80b981db995f73c5a89 213 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 211 34.47 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 P40_02725 a90c873995f3f80b981db995f73c5a89 213 Gene3D G3DSA:3.40.50.880 1 212 1.9E-71 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_02725 a90c873995f3f80b981db995f73c5a89 213 Pfam PF00117 Glutamine amidotransferase class-I 9 209 1.6E-17 T 13-10-2018 IPR017926 Glutamine amidotransferase P40_06360 02e1cc385eacbf5b0b770f6af75d9a3e 271 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 22 248 2.9E-57 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 P40_06360 02e1cc385eacbf5b0b770f6af75d9a3e 271 SUPERFAMILY SSF51419 19 246 6.02E-75 T 13-10-2018 IPR029066 PLP-binding barrel P40_06360 02e1cc385eacbf5b0b770f6af75d9a3e 271 Gene3D G3DSA:3.20.20.10 12 259 2.9E-87 T 13-10-2018 IPR029066 PLP-binding barrel P40_06360 02e1cc385eacbf5b0b770f6af75d9a3e 271 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 24 247 28.707 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 P40_06360 02e1cc385eacbf5b0b770f6af75d9a3e 271 PIRSF PIRSF004848 12 254 8.1E-72 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 P40_06360 02e1cc385eacbf5b0b770f6af75d9a3e 271 Pfam PF01168 Alanine racemase, N-terminal domain 20 249 1.7E-24 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_07825 e541e5bc6e3cf43e63f0801a101299cb 694 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 295 470 2.3E-64 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 P40_07825 e541e5bc6e3cf43e63f0801a101299cb 694 SUPERFAMILY SSF48179 475 617 1.53E-28 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_07825 e541e5bc6e3cf43e63f0801a101299cb 694 Gene3D G3DSA:3.90.226.10 1 290 3.4E-86 T 13-10-2018 P40_07825 e541e5bc6e3cf43e63f0801a101299cb 694 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 191 6.2E-37 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_07825 e541e5bc6e3cf43e63f0801a101299cb 694 Gene3D G3DSA:3.40.50.720 292 475 1.5E-66 T 13-10-2018 P40_07825 e541e5bc6e3cf43e63f0801a101299cb 694 Gene3D G3DSA:1.10.1040.50 477 693 7.1E-75 T 13-10-2018 P40_07825 e541e5bc6e3cf43e63f0801a101299cb 694 SUPERFAMILY SSF48179 599 693 3.49E-26 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_07825 e541e5bc6e3cf43e63f0801a101299cb 694 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 92 112 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 P40_07825 e541e5bc6e3cf43e63f0801a101299cb 694 SUPERFAMILY SSF51735 291 471 4.93E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_07825 e541e5bc6e3cf43e63f0801a101299cb 694 SUPERFAMILY SSF52096 3 286 6.82E-63 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_07825 e541e5bc6e3cf43e63f0801a101299cb 694 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 604 690 1.0E-9 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 P40_07825 e541e5bc6e3cf43e63f0801a101299cb 694 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 475 568 2.3E-26 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 P40_05445 265b882d816a781e197586b7f532087d 119 Pfam PF14248 Domain of unknown function (DUF4345) 4 114 8.5E-17 T 13-10-2018 IPR025597 Protein of unknown function DUF4345 P40_17185 24e0ac47f8ea5219c662f3280a112028 315 Pfam PF01758 Sodium Bile acid symporter family 33 210 2.7E-39 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 P40_17185 24e0ac47f8ea5219c662f3280a112028 315 Gene3D G3DSA:1.20.1530.20 1 303 3.4E-105 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily P40_04095 53de2f0f698d7090222573aad2786eaf 143 SUPERFAMILY SSF51316 2 135 8.27E-42 T 13-10-2018 IPR011057 Mss4-like superfamily P40_04095 53de2f0f698d7090222573aad2786eaf 143 Gene3D G3DSA:2.170.150.70 4 119 2.4E-16 T 13-10-2018 P40_04095 53de2f0f698d7090222573aad2786eaf 143 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 113 2.7E-20 T 13-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 P40_06835 96011ba4bf5d78c53fd7a752bbb85976 435 PIRSF PIRSF016578 70 185 0.02 T 13-10-2018 P40_06835 96011ba4bf5d78c53fd7a752bbb85976 435 PIRSF PIRSF016578 270 430 1.3E-9 T 13-10-2018 P40_06835 96011ba4bf5d78c53fd7a752bbb85976 435 SUPERFAMILY SSF47203 305 431 4.03E-37 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_06835 96011ba4bf5d78c53fd7a752bbb85976 435 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 311 429 4.2E-28 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_06835 96011ba4bf5d78c53fd7a752bbb85976 435 SUPERFAMILY SSF56645 75 298 6.02E-47 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_06835 96011ba4bf5d78c53fd7a752bbb85976 435 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 403 422 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_06835 96011ba4bf5d78c53fd7a752bbb85976 435 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 80 191 1.9E-20 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_06835 96011ba4bf5d78c53fd7a752bbb85976 435 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 199 287 8.4E-13 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_06835 96011ba4bf5d78c53fd7a752bbb85976 435 Gene3D G3DSA:2.40.110.10 198 303 2.5E-21 T 13-10-2018 P40_06835 96011ba4bf5d78c53fd7a752bbb85976 435 Gene3D G3DSA:1.20.140.10 304 434 1.3E-35 T 13-10-2018 P40_06835 96011ba4bf5d78c53fd7a752bbb85976 435 Gene3D G3DSA:1.10.540.10 74 196 6.1E-24 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_13855 87ca4182438862496c750a6dae979cc4 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 24 223 8.6E-4 T 13-10-2018 P40_13855 87ca4182438862496c750a6dae979cc4 258 Gene3D G3DSA:3.40.50.720 11 255 1.4E-71 T 13-10-2018 P40_13855 87ca4182438862496c750a6dae979cc4 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 163 191 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_13855 87ca4182438862496c750a6dae979cc4 258 Pfam PF00106 short chain dehydrogenase 25 220 1.7E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13855 87ca4182438862496c750a6dae979cc4 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 215 1.1E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13855 87ca4182438862496c750a6dae979cc4 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 25 42 1.1E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13855 87ca4182438862496c750a6dae979cc4 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 166 1.1E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13855 87ca4182438862496c750a6dae979cc4 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 102 113 1.1E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13855 87ca4182438862496c750a6dae979cc4 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 195 1.1E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13855 87ca4182438862496c750a6dae979cc4 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.1E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13855 87ca4182438862496c750a6dae979cc4 258 SUPERFAMILY SSF51735 20 253 2.81E-62 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_11365 9750d4ca0add156cf9b50e2d101705a0 239 SMART SM00479 2 175 4.5E-47 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III P40_11365 9750d4ca0add156cf9b50e2d101705a0 239 Pfam PF00929 Exonuclease 4 166 1.6E-36 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III P40_11365 9750d4ca0add156cf9b50e2d101705a0 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 217 1.6E-65 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_11365 9750d4ca0add156cf9b50e2d101705a0 239 SUPERFAMILY SSF53098 1 176 9.04E-57 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_11365 9750d4ca0add156cf9b50e2d101705a0 239 Gene3D G3DSA:3.30.420.10 1 180 9.3E-58 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_11365 9750d4ca0add156cf9b50e2d101705a0 239 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 235 1.9E-91 T 13-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_05770 af8f221a8f908cf13759e30f95049811 301 SUPERFAMILY SSF55008 37 97 5.24E-6 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 P40_05770 af8f221a8f908cf13759e30f95049811 301 SUPERFAMILY SSF161111 125 297 1.03E-32 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_05770 af8f221a8f908cf13759e30f95049811 301 Pfam PF01545 Cation efflux family 130 297 2.3E-15 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 P40_05770 af8f221a8f908cf13759e30f95049811 301 Gene3D G3DSA:1.20.1510.10 125 299 8.3E-12 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_11690 eed1c96d2aec5483700b497929d6130b 253 Gene3D G3DSA:3.40.390.10 147 253 6.4E-36 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 P40_11690 eed1c96d2aec5483700b497929d6130b 253 SUPERFAMILY SSF55486 41 248 5.35E-41 T 13-10-2018 P40_11690 eed1c96d2aec5483700b497929d6130b 253 Gene3D G3DSA:1.10.472.150 20 144 9.3E-39 T 13-10-2018 P40_11690 eed1c96d2aec5483700b497929d6130b 253 Pfam PF06167 Glucose-regulated metallo-peptidase M90 6 246 1.0E-79 T 13-10-2018 IPR010384 MtfA family P40_16860 d2e0b343a7591137330a9938547a35b9 150 PRINTS PR00103 cAMP-dependent protein kinase signature 31 45 3.3E-5 T 13-10-2018 P40_16860 d2e0b343a7591137330a9938547a35b9 150 PRINTS PR00103 cAMP-dependent protein kinase signature 88 99 3.3E-5 T 13-10-2018 P40_16860 d2e0b343a7591137330a9938547a35b9 150 PRINTS PR00103 cAMP-dependent protein kinase signature 76 85 3.3E-5 T 13-10-2018 P40_16860 d2e0b343a7591137330a9938547a35b9 150 Pfam PF00027 Cyclic nucleotide-binding domain 30 115 1.4E-23 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_16860 d2e0b343a7591137330a9938547a35b9 150 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 78 95 - T 13-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site P40_16860 d2e0b343a7591137330a9938547a35b9 150 SMART SM00100 10 128 8.3E-22 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_16860 d2e0b343a7591137330a9938547a35b9 150 SUPERFAMILY SSF51206 3 134 1.15E-31 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like P40_16860 d2e0b343a7591137330a9938547a35b9 150 Gene3D G3DSA:2.60.120.10 1 148 2.2E-37 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_08725 7a7e72e390ac8086b51983c2a42b03a8 365 Gene3D G3DSA:2.40.50.100 1 85 3.9E-23 T 13-10-2018 P40_08725 7a7e72e390ac8086b51983c2a42b03a8 365 Pfam PF02817 e3 binding domain 114 147 3.2E-9 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 P40_08725 7a7e72e390ac8086b51983c2a42b03a8 365 Gene3D G3DSA:4.10.320.10 113 147 1.6E-12 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 P40_08725 7a7e72e390ac8086b51983c2a42b03a8 365 Pfam PF00364 Biotin-requiring enzyme 4 73 1.1E-19 T 13-10-2018 IPR000089 Biotin/lipoyl attachment P40_08725 7a7e72e390ac8086b51983c2a42b03a8 365 SUPERFAMILY SSF47005 108 149 1.57E-8 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 P40_08725 7a7e72e390ac8086b51983c2a42b03a8 365 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 P40_08725 7a7e72e390ac8086b51983c2a42b03a8 365 Gene3D G3DSA:3.30.559.10 148 365 1.1E-47 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 P40_08725 7a7e72e390ac8086b51983c2a42b03a8 365 SUPERFAMILY SSF52777 155 365 5.34E-52 T 13-10-2018 P40_08725 7a7e72e390ac8086b51983c2a42b03a8 365 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 158 363 5.5E-46 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 P40_08725 7a7e72e390ac8086b51983c2a42b03a8 365 SUPERFAMILY SSF51230 3 85 7.72E-25 T 13-10-2018 IPR011053 Single hybrid motif P40_06815 8086cdce4124f80a15c6d21a2505628d 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 435 1.8E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_06815 8086cdce4124f80a15c6d21a2505628d 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.2E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_06815 8086cdce4124f80a15c6d21a2505628d 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 1.2E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_06815 8086cdce4124f80a15c6d21a2505628d 440 SUPERFAMILY SSF55874 311 438 2.1E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_06815 8086cdce4124f80a15c6d21a2505628d 440 Gene3D G3DSA:3.30.565.10 304 440 4.7E-23 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_06815 8086cdce4124f80a15c6d21a2505628d 440 Gene3D G3DSA:1.10.287.130 180 289 1.1E-7 T 13-10-2018 P40_06815 8086cdce4124f80a15c6d21a2505628d 440 SUPERFAMILY SSF47384 212 283 9.68E-5 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_06815 8086cdce4124f80a15c6d21a2505628d 440 SMART SM00387 332 439 8.0E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_02355 bb5d57cc8f48088b24cf63119c1ca82f 146 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 93 5.3E-18 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 P40_02355 bb5d57cc8f48088b24cf63119c1ca82f 146 Gene3D G3DSA:1.20.1290.10 1 145 1.5E-46 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 P40_02355 bb5d57cc8f48088b24cf63119c1ca82f 146 SUPERFAMILY SSF69118 4 146 6.42E-43 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 P40_02355 bb5d57cc8f48088b24cf63119c1ca82f 146 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 75 1.0E-13 T 13-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 P40_04405 cc61c52957255e3aeaed24814aff2a82 219 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 156 209 3.4E-8 T 13-10-2018 IPR006260 TonB/TolA, C-terminal P40_04405 cc61c52957255e3aeaed24814aff2a82 219 Pfam PF13103 TonB C terminal 151 198 4.4E-6 T 13-10-2018 P40_04405 cc61c52957255e3aeaed24814aff2a82 219 SUPERFAMILY SSF74653 119 214 1.27E-11 T 13-10-2018 P40_04405 cc61c52957255e3aeaed24814aff2a82 219 Gene3D G3DSA:3.30.1150.10 119 211 3.8E-8 T 13-10-2018 P40_02115 d8f3ece13516b85027cdc13108aa7905 219 Pfam PF13649 Methyltransferase domain 48 144 2.0E-13 T 13-10-2018 P40_02115 d8f3ece13516b85027cdc13108aa7905 219 SUPERFAMILY SSF53335 24 190 5.41E-31 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_02115 d8f3ece13516b85027cdc13108aa7905 219 Gene3D G3DSA:3.40.50.150 9 212 7.1E-34 T 13-10-2018 P40_10515 b7766637973eeed64779f6b6c95558db 246 PRINTS PR01021 OMPA domain signature 175 190 1.0E-10 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_10515 b7766637973eeed64779f6b6c95558db 246 PRINTS PR01021 OMPA domain signature 145 167 1.0E-10 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_10515 b7766637973eeed64779f6b6c95558db 246 PRINTS PR01021 OMPA domain signature 190 206 1.0E-10 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_10515 b7766637973eeed64779f6b6c95558db 246 Gene3D G3DSA:3.40.1520.20 20 122 3.4E-6 T 13-10-2018 P40_10515 b7766637973eeed64779f6b6c95558db 246 Gene3D G3DSA:3.30.1330.60 123 245 1.8E-36 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_10515 b7766637973eeed64779f6b6c95558db 246 Pfam PF00691 OmpA family 145 239 3.2E-22 T 13-10-2018 IPR006665 OmpA-like domain P40_10515 b7766637973eeed64779f6b6c95558db 246 SUPERFAMILY SSF103088 139 245 1.15E-33 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_10515 b7766637973eeed64779f6b6c95558db 246 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 190 207 2.8E-7 T 13-10-2018 P40_10515 b7766637973eeed64779f6b6c95558db 246 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 208 227 2.8E-7 T 13-10-2018 P40_10515 b7766637973eeed64779f6b6c95558db 246 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 132 159 2.8E-7 T 13-10-2018 P40_10515 b7766637973eeed64779f6b6c95558db 246 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 228 246 2.8E-7 T 13-10-2018 P40_18610 c16ded404e91eeaa7c366b6cbcf14f96 191 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 56 183 1.4E-16 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_15730 99a3cb4f594ac551d550a6b3a82872fc 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 4.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_15730 99a3cb4f594ac551d550a6b3a82872fc 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 4.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_15730 99a3cb4f594ac551d550a6b3a82872fc 262 Pfam PF12833 Helix-turn-helix domain 180 257 8.8E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_15730 99a3cb4f594ac551d550a6b3a82872fc 262 Gene3D G3DSA:1.10.10.60 159 217 3.7E-14 T 13-10-2018 P40_15730 99a3cb4f594ac551d550a6b3a82872fc 262 SMART SM00342 174 256 4.3E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_15730 99a3cb4f594ac551d550a6b3a82872fc 262 SUPERFAMILY SSF46689 211 257 3.67E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_15730 99a3cb4f594ac551d550a6b3a82872fc 262 Gene3D G3DSA:1.10.10.60 218 260 9.0E-12 T 13-10-2018 P40_15730 99a3cb4f594ac551d550a6b3a82872fc 262 Pfam PF02311 AraC-like ligand binding domain 27 127 6.3E-13 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 P40_15730 99a3cb4f594ac551d550a6b3a82872fc 262 SUPERFAMILY SSF51215 16 126 1.44E-12 T 13-10-2018 IPR037923 Transcription regulator HTH-like P40_15730 99a3cb4f594ac551d550a6b3a82872fc 262 SUPERFAMILY SSF46689 162 206 1.43E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_00125 07691d6a613ce756bbca90a20457e4b4 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 1.9E-35 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 P40_00125 07691d6a613ce756bbca90a20457e4b4 409 SUPERFAMILY SSF55021 332 408 2.37E-17 T 13-10-2018 P40_00125 07691d6a613ce756bbca90a20457e4b4 409 Gene3D G3DSA:3.40.50.720 14 312 9.5E-105 T 13-10-2018 P40_00125 07691d6a613ce756bbca90a20457e4b4 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 P40_00125 07691d6a613ce756bbca90a20457e4b4 409 Gene3D G3DSA:3.40.50.720 109 297 9.5E-105 T 13-10-2018 P40_00125 07691d6a613ce756bbca90a20457e4b4 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site P40_00125 07691d6a613ce756bbca90a20457e4b4 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 3.1E-51 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 P40_00125 07691d6a613ce756bbca90a20457e4b4 409 SUPERFAMILY SSF51735 108 295 3.14E-57 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_00125 07691d6a613ce756bbca90a20457e4b4 409 SUPERFAMILY SSF52283 7 134 1.25E-48 T 13-10-2018 P40_00125 07691d6a613ce756bbca90a20457e4b4 409 Gene3D G3DSA:3.30.70.260 328 408 1.6E-32 T 13-10-2018 P40_17690 35cbb0943ea8f65fbb4a4f1a0a30f5c1 313 Gene3D G3DSA:1.10.150.130 6 103 2.0E-9 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal P40_17690 35cbb0943ea8f65fbb4a4f1a0a30f5c1 313 SUPERFAMILY SSF56349 10 297 7.95E-41 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 P40_17690 35cbb0943ea8f65fbb4a4f1a0a30f5c1 313 Gene3D G3DSA:1.10.443.10 104 304 7.7E-30 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 P40_17690 35cbb0943ea8f65fbb4a4f1a0a30f5c1 313 Pfam PF00589 Phage integrase family 131 293 1.5E-21 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 P40_07610 f1d563984a7754989258d5e93f1241b5 155 Gene3D G3DSA:3.10.129.10 5 153 5.4E-46 T 13-10-2018 P40_07610 f1d563984a7754989258d5e93f1241b5 155 SUPERFAMILY SSF54637 9 149 2.29E-35 T 13-10-2018 IPR029069 HotDog domain superfamily P40_07610 f1d563984a7754989258d5e93f1241b5 155 Pfam PF01575 MaoC like domain 14 117 2.2E-24 T 13-10-2018 IPR002539 MaoC-like dehydratase domain P40_01185 d2cb0f54baac1e3d5f777c6964e032b6 384 Pfam PF01594 AI-2E family transporter 11 337 6.8E-56 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like P40_14960 305df0c0ca1d333c270abb38f2bd6fed 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.381 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_14960 305df0c0ca1d333c270abb38f2bd6fed 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 6.5E-41 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_14960 305df0c0ca1d333c270abb38f2bd6fed 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 6.5E-41 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_14960 305df0c0ca1d333c270abb38f2bd6fed 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 6.5E-41 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_14960 305df0c0ca1d333c270abb38f2bd6fed 119 SUPERFAMILY SSF74731 3 116 1.96E-48 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_14960 305df0c0ca1d333c270abb38f2bd6fed 119 Gene3D G3DSA:1.10.720.90 2 55 1.6E-23 T 13-10-2018 P40_14960 305df0c0ca1d333c270abb38f2bd6fed 119 Pfam PF00453 Ribosomal protein L20 3 109 1.1E-47 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_14960 305df0c0ca1d333c270abb38f2bd6fed 119 Gene3D G3DSA:1.10.1900.20 56 119 3.3E-26 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_14960 305df0c0ca1d333c270abb38f2bd6fed 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 8.1E-50 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_14960 305df0c0ca1d333c270abb38f2bd6fed 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 7.0E-13 T 13-10-2018 P40_14960 305df0c0ca1d333c270abb38f2bd6fed 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_00040 eea7564ef5a862e8a32ebee85cca64d7 255 SUPERFAMILY SSF46785 34 101 1.9E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_00040 eea7564ef5a862e8a32ebee85cca64d7 255 SMART SM00895 107 230 9.9E-15 T 13-10-2018 IPR011711 GntR, C-terminal P40_00040 eea7564ef5a862e8a32ebee85cca64d7 255 SMART SM00345 39 97 7.7E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_00040 eea7564ef5a862e8a32ebee85cca64d7 255 Gene3D G3DSA:1.20.120.530 100 241 6.2E-22 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_00040 eea7564ef5a862e8a32ebee85cca64d7 255 Gene3D G3DSA:1.10.10.10 22 98 2.9E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_00040 eea7564ef5a862e8a32ebee85cca64d7 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 37 97 1.5E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_00040 eea7564ef5a862e8a32ebee85cca64d7 255 Pfam PF07729 FCD domain 107 228 1.3E-21 T 13-10-2018 IPR011711 GntR, C-terminal P40_00040 eea7564ef5a862e8a32ebee85cca64d7 255 SUPERFAMILY SSF48008 102 235 1.96E-22 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_02035 a4b9416fa7b84cb4d4de0b133c8fed37 576 SUPERFAMILY SSF56112 254 533 4.45E-58 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_02035 a4b9416fa7b84cb4d4de0b133c8fed37 576 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 390 402 - T 13-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 P40_02035 a4b9416fa7b84cb4d4de0b133c8fed37 576 Gene3D G3DSA:3.30.200.20 261 350 4.5E-10 T 13-10-2018 P40_02035 a4b9416fa7b84cb4d4de0b133c8fed37 576 SMART SM00331 24 238 2.5E-10 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 P40_02035 a4b9416fa7b84cb4d4de0b133c8fed37 576 SMART SM00332 1 236 2.3E-26 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 P40_02035 a4b9416fa7b84cb4d4de0b133c8fed37 576 Gene3D G3DSA:3.60.40.10 1 240 1.5E-45 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 P40_02035 a4b9416fa7b84cb4d4de0b133c8fed37 576 Pfam PF00069 Protein kinase domain 281 520 3.0E-35 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 P40_02035 a4b9416fa7b84cb4d4de0b133c8fed37 576 SUPERFAMILY SSF81606 6 239 1.26E-50 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 P40_02035 a4b9416fa7b84cb4d4de0b133c8fed37 576 Gene3D G3DSA:1.10.510.10 352 536 2.2E-39 T 13-10-2018 P40_02035 a4b9416fa7b84cb4d4de0b133c8fed37 576 Pfam PF13672 Protein phosphatase 2C 15 207 1.3E-17 T 13-10-2018 P40_15240 617116e3202ee32d78576afbefc52899 373 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 213 311 1.3E-28 T 13-10-2018 IPR019236 Domain of unknown function DUF2183 P40_04380 f76a340917511ecf3108c0df0fabc8a8 226 PRINTS PR01399 Enterobactin synthetase component D signature 76 94 3.9E-17 T 13-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 P40_04380 f76a340917511ecf3108c0df0fabc8a8 226 PRINTS PR01399 Enterobactin synthetase component D signature 154 170 3.9E-17 T 13-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 P40_04380 f76a340917511ecf3108c0df0fabc8a8 226 PRINTS PR01399 Enterobactin synthetase component D signature 46 66 3.9E-17 T 13-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 P40_04380 f76a340917511ecf3108c0df0fabc8a8 226 Gene3D G3DSA:3.90.470.20 109 217 2.7E-8 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 P40_04380 f76a340917511ecf3108c0df0fabc8a8 226 SUPERFAMILY SSF56214 108 206 8.02E-17 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 P40_04380 f76a340917511ecf3108c0df0fabc8a8 226 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 110 194 6.4E-12 T 13-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 P40_15595 47b3d93026feaab8048022480a4715d5 240 SUPERFAMILY SSF69593 16 236 1.44E-27 T 13-10-2018 P40_15595 47b3d93026feaab8048022480a4715d5 240 Pfam PF01553 Acyltransferase 59 174 2.1E-19 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_15595 47b3d93026feaab8048022480a4715d5 240 SMART SM00563 69 178 4.9E-28 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_06090 f17d16752e8282836ed91d5e95702e36 119 SMART SM00530 11 66 1.7E-16 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_06090 f17d16752e8282836ed91d5e95702e36 119 Gene3D G3DSA:1.10.260.40 2 74 2.3E-19 T 13-10-2018 P40_06090 f17d16752e8282836ed91d5e95702e36 119 SUPERFAMILY SSF47413 3 70 4.61E-19 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_06090 f17d16752e8282836ed91d5e95702e36 119 Pfam PF01381 Helix-turn-helix 14 66 2.6E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_09940 75759b6593abf0686c2f312891e38945 410 Gene3D G3DSA:3.50.50.60 118 244 1.4E-107 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_09940 75759b6593abf0686c2f312891e38945 410 SUPERFAMILY SSF51905 5 195 1.64E-49 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_09940 75759b6593abf0686c2f312891e38945 410 SUPERFAMILY SSF51905 149 316 8.2E-33 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_09940 75759b6593abf0686c2f312891e38945 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 175 5.8E-14 T 13-10-2018 P40_09940 75759b6593abf0686c2f312891e38945 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 5.8E-14 T 13-10-2018 P40_09940 75759b6593abf0686c2f312891e38945 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 5.8E-14 T 13-10-2018 P40_09940 75759b6593abf0686c2f312891e38945 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 5.8E-14 T 13-10-2018 P40_09940 75759b6593abf0686c2f312891e38945 410 Gene3D G3DSA:3.50.50.60 10 314 1.4E-107 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_09940 75759b6593abf0686c2f312891e38945 410 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 307 1.2E-66 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_09940 75759b6593abf0686c2f312891e38945 410 Pfam PF14759 Reductase C-terminal 326 410 1.3E-29 T 13-10-2018 IPR028202 Reductase, C-terminal P40_09940 75759b6593abf0686c2f312891e38945 410 SUPERFAMILY SSF55424 318 409 2.75E-30 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P40_09940 75759b6593abf0686c2f312891e38945 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 8.5E-23 T 13-10-2018 P40_09940 75759b6593abf0686c2f312891e38945 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 8.5E-23 T 13-10-2018 P40_09940 75759b6593abf0686c2f312891e38945 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 8.5E-23 T 13-10-2018 P40_09940 75759b6593abf0686c2f312891e38945 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.5E-23 T 13-10-2018 P40_09940 75759b6593abf0686c2f312891e38945 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 8.5E-23 T 13-10-2018 P40_09940 75759b6593abf0686c2f312891e38945 410 Gene3D G3DSA:3.30.390.30 326 410 1.5E-30 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P40_04690 4fbc0ccb935f3f3226bba246839e3223 221 SUPERFAMILY SSF53448 1 219 2.07E-53 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_04690 4fbc0ccb935f3f3226bba246839e3223 221 Gene3D G3DSA:3.90.550.10 1 221 3.9E-58 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_04690 4fbc0ccb935f3f3226bba246839e3223 221 Pfam PF00483 Nucleotidyl transferase 3 142 4.0E-19 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 P40_13930 3f2065bc7355fbecaccc72b0b5dad847 248 Gene3D G3DSA:3.40.50.1240 2 248 7.7E-90 T 13-10-2018 IPR029033 Histidine phosphatase superfamily P40_13930 3f2065bc7355fbecaccc72b0b5dad847 248 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 247 2.0E-121 T 13-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 P40_13930 3f2065bc7355fbecaccc72b0b5dad847 248 SUPERFAMILY SSF53254 1 246 9.84E-80 T 13-10-2018 IPR029033 Histidine phosphatase superfamily P40_13930 3f2065bc7355fbecaccc72b0b5dad847 248 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 229 45.697 T 13-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 P40_13930 3f2065bc7355fbecaccc72b0b5dad847 248 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 13-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 P40_13930 3f2065bc7355fbecaccc72b0b5dad847 248 PIRSF PIRSF000709 2 227 1.6E-10 T 13-10-2018 P40_13930 3f2065bc7355fbecaccc72b0b5dad847 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 129 220 1.3E-5 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_13930 3f2065bc7355fbecaccc72b0b5dad847 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 125 2.2E-30 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_13930 3f2065bc7355fbecaccc72b0b5dad847 248 SMART SM00855 4 190 5.9E-29 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_03520 8af377237b768050b9970bb7db6ce463 229 Pfam PF00857 Isochorismatase family 24 216 1.8E-42 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 P40_03520 8af377237b768050b9970bb7db6ce463 229 Gene3D G3DSA:3.40.50.850 18 228 3.8E-61 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_03520 8af377237b768050b9970bb7db6ce463 229 SUPERFAMILY SSF52499 8 226 1.01E-58 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 ProSitePatterns PS00786 5'-nucleotidase signature 2. 122 133 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 PRINTS PR01607 Apyrase family signature 294 314 3.1E-28 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 PRINTS PR01607 Apyrase family signature 457 480 3.1E-28 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 PRINTS PR01607 Apyrase family signature 249 272 3.1E-28 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 PRINTS PR01607 Apyrase family signature 537 556 3.1E-28 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 PRINTS PR01607 Apyrase family signature 230 247 3.1E-28 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 PRINTS PR01607 Apyrase family signature 38 56 3.1E-28 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 Pfam PF00149 Calcineurin-like phosphoesterase 40 266 9.8E-8 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 Pfam PF02872 5'-nucleotidase, C-terminal domain 423 562 5.1E-32 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 SUPERFAMILY SSF56300 39 339 6.83E-75 T 13-10-2018 P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 Gene3D G3DSA:3.60.21.10 30 390 2.7E-111 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 Gene3D G3DSA:3.90.780.10 408 601 2.1E-54 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 SUPERFAMILY SSF55816 420 595 1.18E-42 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 ProSitePatterns PS00785 5'-nucleotidase signature 1. 40 52 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_11415 6b298cdaaa6bdc4e13f73862b250fa33 610 TIGRFAM TIGR01530 nadN: NAD nucleotidase 40 587 5.5E-137 T 13-10-2018 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN GO:0008253|GO:0009166 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 P40_07720 23e40755853625ba9b0158c3486cb63e 224 Pfam PF00805 Pentapeptide repeats (8 copies) 177 216 1.1E-8 T 13-10-2018 IPR001646 Pentapeptide repeat P40_07720 23e40755853625ba9b0158c3486cb63e 224 Pfam PF00805 Pentapeptide repeats (8 copies) 52 90 3.7E-14 T 13-10-2018 IPR001646 Pentapeptide repeat P40_07720 23e40755853625ba9b0158c3486cb63e 224 SUPERFAMILY SSF141571 48 211 1.86E-38 T 13-10-2018 P40_07720 23e40755853625ba9b0158c3486cb63e 224 Pfam PF13599 Pentapeptide repeats (9 copies) 97 169 1.1E-7 T 13-10-2018 IPR001646 Pentapeptide repeat P40_07720 23e40755853625ba9b0158c3486cb63e 224 Gene3D G3DSA:2.160.20.80 27 128 3.3E-24 T 13-10-2018 P40_07720 23e40755853625ba9b0158c3486cb63e 224 Gene3D G3DSA:2.160.20.80 129 220 1.7E-18 T 13-10-2018 P40_00355 c59454bfb17a10b3d9bdfd97892e4dca 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 5.0E-44 T 13-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 P40_00355 c59454bfb17a10b3d9bdfd97892e4dca 317 Gene3D G3DSA:3.30.1490.20 138 202 9.3E-115 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_00355 c59454bfb17a10b3d9bdfd97892e4dca 317 Gene3D G3DSA:3.30.470.20 116 296 9.3E-115 T 13-10-2018 P40_00355 c59454bfb17a10b3d9bdfd97892e4dca 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 311 8.3E-137 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 P40_00355 c59454bfb17a10b3d9bdfd97892e4dca 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 1.5E-75 T 13-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 P40_00355 c59454bfb17a10b3d9bdfd97892e4dca 317 SUPERFAMILY SSF52440 3 122 1.15E-43 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_00355 c59454bfb17a10b3d9bdfd97892e4dca 317 SUPERFAMILY SSF56059 124 312 3.53E-56 T 13-10-2018 P40_00355 c59454bfb17a10b3d9bdfd97892e4dca 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 164.048 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 P40_00355 c59454bfb17a10b3d9bdfd97892e4dca 317 Gene3D G3DSA:3.40.50.20 8 115 9.3E-115 T 13-10-2018 P40_17205 3b774baef9c7f582b84dd0dd1f3abc01 484 Gene3D G3DSA:3.40.605.10 28 475 8.9E-183 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_17205 3b774baef9c7f582b84dd0dd1f3abc01 484 Gene3D G3DSA:3.40.309.10 261 450 8.9E-183 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_17205 3b774baef9c7f582b84dd0dd1f3abc01 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 285 296 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 P40_17205 3b774baef9c7f582b84dd0dd1f3abc01 484 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 33 479 2.9E-218 T 13-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 P40_17205 3b774baef9c7f582b84dd0dd1f3abc01 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 257 264 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 P40_17205 3b774baef9c7f582b84dd0dd1f3abc01 484 SUPERFAMILY SSF53720 8 484 1.83E-174 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_17205 3b774baef9c7f582b84dd0dd1f3abc01 484 Pfam PF00171 Aldehyde dehydrogenase family 22 480 2.2E-170 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_02870 c92cffb34d9887c346d8182d7b0402cb 80 SUPERFAMILY SSF64307 3 72 4.06E-22 T 13-10-2018 IPR036868 TusA-like domain superfamily P40_02870 c92cffb34d9887c346d8182d7b0402cb 80 Pfam PF01206 Sulfurtransferase TusA 4 71 9.9E-24 T 13-10-2018 IPR001455 TusA-like domain P40_02870 c92cffb34d9887c346d8182d7b0402cb 80 Gene3D G3DSA:3.30.110.40 1 74 5.4E-26 T 13-10-2018 IPR036868 TusA-like domain superfamily P40_11435 292bd8af2281d22dd561465379068f7c 797 Gene3D G3DSA:1.20.58.1480 116 238 8.5E-42 T 13-10-2018 P40_11435 292bd8af2281d22dd561465379068f7c 797 SUPERFAMILY SSF88697 3 194 9.19E-48 T 13-10-2018 IPR015947 PUA-like superfamily P40_11435 292bd8af2281d22dd561465379068f7c 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 588 604 1.7E-55 T 13-10-2018 P40_11435 292bd8af2281d22dd561465379068f7c 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 666 685 1.7E-55 T 13-10-2018 P40_11435 292bd8af2281d22dd561465379068f7c 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 696 715 1.7E-55 T 13-10-2018 P40_11435 292bd8af2281d22dd561465379068f7c 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 349 368 1.7E-55 T 13-10-2018 P40_11435 292bd8af2281d22dd561465379068f7c 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 719 737 1.7E-55 T 13-10-2018 P40_11435 292bd8af2281d22dd561465379068f7c 797 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 564 765 1.7E-94 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 P40_11435 292bd8af2281d22dd561465379068f7c 797 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 669 677 - T 13-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 P40_11435 292bd8af2281d22dd561465379068f7c 797 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 345 481 1.1E-16 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_11435 292bd8af2281d22dd561465379068f7c 797 TIGRFAM TIGR00763 lon: endopeptidase La 5 764 2.4E-301 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 P40_11435 292bd8af2281d22dd561465379068f7c 797 SUPERFAMILY SSF52540 306 580 1.04E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_11435 292bd8af2281d22dd561465379068f7c 797 Gene3D G3DSA:2.30.130.40 2 108 9.9E-31 T 13-10-2018 P40_11435 292bd8af2281d22dd561465379068f7c 797 Hamap MF_01973 Lon protease [lon]. 4 765 69.882 T 13-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 P40_11435 292bd8af2281d22dd561465379068f7c 797 Gene3D G3DSA:1.10.8.60 484 577 6.5E-33 T 13-10-2018 P40_11435 292bd8af2281d22dd561465379068f7c 797 PIRSF PIRSF001174 1 768 0.0 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 P40_11435 292bd8af2281d22dd561465379068f7c 797 Gene3D G3DSA:3.30.230.10 578 765 6.0E-80 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P40_11435 292bd8af2281d22dd561465379068f7c 797 SMART SM00464 3 195 7.8E-71 T 13-10-2018 IPR003111 Lon, substrate-binding domain P40_11435 292bd8af2281d22dd561465379068f7c 797 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 4 194 5.0E-37 T 13-10-2018 IPR003111 Lon, substrate-binding domain P40_11435 292bd8af2281d22dd561465379068f7c 797 SUPERFAMILY SSF54211 588 763 2.16E-56 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_11435 292bd8af2281d22dd561465379068f7c 797 SMART SM00382 341 485 1.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_11435 292bd8af2281d22dd561465379068f7c 797 Gene3D G3DSA:3.40.50.300 306 483 4.9E-61 T 13-10-2018 P40_20660 28584d129563143b6c8e7bd61f7c5564 363 Pfam PF07819 PGAP1-like protein 121 282 1.8E-11 T 13-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 P40_20660 28584d129563143b6c8e7bd61f7c5564 363 SUPERFAMILY SSF53474 115 351 6.43E-21 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_07885 91e4dc197631f24415673f6d97fac997 764 SUPERFAMILY SSF51735 163 437 1.8E-81 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_07885 91e4dc197631f24415673f6d97fac997 764 Pfam PF01515 Phosphate acetyl/butaryl transferase 437 755 6.7E-94 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 P40_07885 91e4dc197631f24415673f6d97fac997 764 Gene3D G3DSA:3.40.50.10950 448 755 1.1E-94 T 13-10-2018 P40_07885 91e4dc197631f24415673f6d97fac997 764 SMART SM00919 163 400 5.0E-133 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 P40_07885 91e4dc197631f24415673f6d97fac997 764 Pfam PF00390 Malic enzyme, N-terminal domain 20 151 1.8E-25 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 P40_07885 91e4dc197631f24415673f6d97fac997 764 Gene3D G3DSA:3.40.50.720 161 442 2.3E-79 T 13-10-2018 P40_07885 91e4dc197631f24415673f6d97fac997 764 SUPERFAMILY SSF53223 10 161 3.09E-51 T 13-10-2018 P40_07885 91e4dc197631f24415673f6d97fac997 764 SUPERFAMILY SSF53659 443 758 1.23E-87 T 13-10-2018 P40_07885 91e4dc197631f24415673f6d97fac997 764 SMART SM01274 18 151 1.3E-74 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 P40_07885 91e4dc197631f24415673f6d97fac997 764 PIRSF PIRSF036684 1 763 0.0 T 13-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 P40_07885 91e4dc197631f24415673f6d97fac997 764 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 1.2E-19 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 P40_07885 91e4dc197631f24415673f6d97fac997 764 Gene3D G3DSA:3.40.50.10750 577 731 1.1E-94 T 13-10-2018 P40_07885 91e4dc197631f24415673f6d97fac997 764 Gene3D G3DSA:3.40.50.10380 2 160 3.2E-65 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 P40_15935 ed1591253604fde1ab1c82a1e7ec2594 286 Gene3D G3DSA:1.10.155.10 16 93 2.3E-24 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily P40_15935 ed1591253604fde1ab1c82a1e7ec2594 286 SMART SM00138 27 286 1.2E-97 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_15935 ed1591253604fde1ab1c82a1e7ec2594 286 SUPERFAMILY SSF47757 19 94 2.75E-20 T 13-10-2018 P40_15935 ed1591253604fde1ab1c82a1e7ec2594 286 Pfam PF03705 CheR methyltransferase, all-alpha domain 29 78 4.1E-16 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal P40_15935 ed1591253604fde1ab1c82a1e7ec2594 286 PIRSF PIRSF000410 9 286 1.2E-95 T 13-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR P40_15935 ed1591253604fde1ab1c82a1e7ec2594 286 PRINTS PR00996 Glutamate methyltransferase family signature 88 100 6.2E-44 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_15935 ed1591253604fde1ab1c82a1e7ec2594 286 PRINTS PR00996 Glutamate methyltransferase family signature 226 240 6.2E-44 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_15935 ed1591253604fde1ab1c82a1e7ec2594 286 PRINTS PR00996 Glutamate methyltransferase family signature 121 141 6.2E-44 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_15935 ed1591253604fde1ab1c82a1e7ec2594 286 PRINTS PR00996 Glutamate methyltransferase family signature 245 268 6.2E-44 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_15935 ed1591253604fde1ab1c82a1e7ec2594 286 PRINTS PR00996 Glutamate methyltransferase family signature 154 170 6.2E-44 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_15935 ed1591253604fde1ab1c82a1e7ec2594 286 PRINTS PR00996 Glutamate methyltransferase family signature 49 62 6.2E-44 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 P40_15935 ed1591253604fde1ab1c82a1e7ec2594 286 Pfam PF01739 CheR methyltransferase, SAM binding domain 95 282 2.1E-56 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal P40_15935 ed1591253604fde1ab1c82a1e7ec2594 286 Gene3D G3DSA:3.40.50.150 94 286 1.7E-68 T 13-10-2018 P40_15935 ed1591253604fde1ab1c82a1e7ec2594 286 SUPERFAMILY SSF53335 95 283 2.17E-56 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_17485 ecbabe7b56511f8c0b2dd8609c85b4e3 487 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 3 476 2.0E-147 T 13-10-2018 IPR021207 Integrating conjugative element protein, PFL4705 P40_20320 d70039a279d03513854794430bd9cc5e 170 Pfam PF01638 HxlR-like helix-turn-helix 19 106 8.4E-24 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type P40_20320 d70039a279d03513854794430bd9cc5e 170 SUPERFAMILY SSF46785 5 144 9.69E-41 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_20320 d70039a279d03513854794430bd9cc5e 170 Gene3D G3DSA:1.10.10.10 2 159 2.2E-51 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_19190 12def47eaa644276313070651bd5a81c 527 Gene3D G3DSA:3.40.50.12780 1 421 4.1E-128 T 13-10-2018 P40_19190 12def47eaa644276313070651bd5a81c 527 Pfam PF00501 AMP-binding enzyme 30 428 4.9E-88 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_19190 12def47eaa644276313070651bd5a81c 527 Gene3D G3DSA:3.30.300.310 424 526 4.2E-30 T 13-10-2018 P40_19190 12def47eaa644276313070651bd5a81c 527 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_19190 12def47eaa644276313070651bd5a81c 527 SUPERFAMILY SSF56801 5 525 3.14E-154 T 13-10-2018 P40_19190 12def47eaa644276313070651bd5a81c 527 Pfam PF13193 AMP-binding enzyme C-terminal domain 437 515 1.8E-21 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_11920 198fc5283f8b184cdcbe1d64386e51a5 1039 Gene3D G3DSA:3.20.20.140 1 255 4.6E-51 T 13-10-2018 P40_11920 198fc5283f8b184cdcbe1d64386e51a5 1039 Pfam PF02811 PHP domain 5 122 1.4E-13 T 13-10-2018 IPR004013 PHP domain GO:0003824 P40_11920 198fc5283f8b184cdcbe1d64386e51a5 1039 Pfam PF14579 Helix-hairpin-helix motif 774 866 2.8E-21 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_11920 198fc5283f8b184cdcbe1d64386e51a5 1039 Pfam PF01336 OB-fold nucleic acid binding domain 949 1012 2.0E-9 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 P40_11920 198fc5283f8b184cdcbe1d64386e51a5 1039 SMART SM00481 4 77 6.5E-10 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal P40_11920 198fc5283f8b184cdcbe1d64386e51a5 1039 SUPERFAMILY SSF89550 3 215 2.35E-11 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 P40_11920 198fc5283f8b184cdcbe1d64386e51a5 1039 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1039 13.383 T 13-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_11920 198fc5283f8b184cdcbe1d64386e51a5 1039 Gene3D G3DSA:1.10.150.870 759 854 5.9E-6 T 13-10-2018 P40_11920 198fc5283f8b184cdcbe1d64386e51a5 1039 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 983 2.9E-163 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_11920 198fc5283f8b184cdcbe1d64386e51a5 1039 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 277 700 2.1E-146 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_08650 198be30de46be318cafd4fed1d1dbac6 132 PIRSF PIRSF026426 1 121 4.3E-35 T 13-10-2018 IPR010865 Protein of unknown function DUF1499 P40_08650 198be30de46be318cafd4fed1d1dbac6 132 Pfam PF07386 Protein of unknown function (DUF1499) 7 116 3.0E-26 T 13-10-2018 IPR010865 Protein of unknown function DUF1499 P40_13595 bea10740c7eba25dbb66e705e982cb78 362 ProSitePatterns PS01215 Mrp family signature. 205 221 - T 13-10-2018 IPR000808 Mrp, conserved site GO:0005524 P40_13595 bea10740c7eba25dbb66e705e982cb78 362 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 96 341 6.6E-96 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 P40_13595 bea10740c7eba25dbb66e705e982cb78 362 Pfam PF01883 Iron-sulfur cluster assembly protein 5 71 1.6E-10 T 13-10-2018 IPR002744 MIP18 family-like P40_13595 bea10740c7eba25dbb66e705e982cb78 362 SUPERFAMILY SSF117916 3 79 3.6E-8 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily P40_13595 bea10740c7eba25dbb66e705e982cb78 362 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 346 35.712 T 13-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein P40_13595 bea10740c7eba25dbb66e705e982cb78 362 SUPERFAMILY SSF52540 99 352 2.47E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_13595 bea10740c7eba25dbb66e705e982cb78 362 Gene3D G3DSA:3.40.50.300 91 338 3.2E-80 T 13-10-2018 P40_01525 5a3e48b9bb983000fd3573f73cb52e4d 400 Pfam PF03929 PepSY-associated TM region 10 395 1.8E-53 T 13-10-2018 IPR005625 PepSY-associated TM protein P40_14965 0ea1c52a51b1503bcc412dd0274f6664 64 SUPERFAMILY SSF143034 2 63 6.8E-23 T 13-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_14965 0ea1c52a51b1503bcc412dd0274f6664 64 Pfam PF01632 Ribosomal protein L35 2 61 8.7E-25 T 13-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_14965 0ea1c52a51b1503bcc412dd0274f6664 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 13-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_14965 0ea1c52a51b1503bcc412dd0274f6664 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.403 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 P40_14965 0ea1c52a51b1503bcc412dd0274f6664 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 7.2E-27 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 P40_14965 0ea1c52a51b1503bcc412dd0274f6664 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 1.6E-19 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 P40_14965 0ea1c52a51b1503bcc412dd0274f6664 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.6E-19 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 P40_14965 0ea1c52a51b1503bcc412dd0274f6664 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 1.6E-19 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 P40_14965 0ea1c52a51b1503bcc412dd0274f6664 64 Gene3D G3DSA:2.40.50.530 4 63 8.3E-23 T 13-10-2018 P40_14155 129ccc4daece8d3498d74a98e435f1b3 137 Pfam PF02635 DsrE/DsrF-like family 5 133 3.5E-9 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein P40_14155 129ccc4daece8d3498d74a98e435f1b3 137 Gene3D G3DSA:3.40.1260.10 4 133 2.1E-16 T 13-10-2018 IPR027396 DsrEFH-like P40_14155 129ccc4daece8d3498d74a98e435f1b3 137 SUPERFAMILY SSF75169 7 133 4.71E-16 T 13-10-2018 IPR027396 DsrEFH-like P40_09785 518216f9cbd55870db1432feeb5e87ad 153 Pfam PF03061 Thioesterase superfamily 49 120 3.7E-9 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_09785 518216f9cbd55870db1432feeb5e87ad 153 SUPERFAMILY SSF54637 10 136 1.03E-24 T 13-10-2018 IPR029069 HotDog domain superfamily P40_09785 518216f9cbd55870db1432feeb5e87ad 153 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 95 1.1E-10 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 P40_09785 518216f9cbd55870db1432feeb5e87ad 153 Gene3D G3DSA:3.10.129.10 2 139 5.4E-30 T 13-10-2018 P40_15000 9b0e3350df0c6eba06f39c142a6336a2 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 2.1E-98 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 P40_15000 9b0e3350df0c6eba06f39c142a6336a2 335 PIRSF PIRSF000267 2 335 1.0E-92 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 P40_15000 9b0e3350df0c6eba06f39c142a6336a2 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 330 1.2E-48 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 P40_20475 5f98615cbe567e396f2e5c3e817485bd 550 Gene3D G3DSA:3.30.300.310 440 542 9.9E-35 T 13-10-2018 P40_20475 5f98615cbe567e396f2e5c3e817485bd 550 Gene3D G3DSA:3.40.50.12780 1 439 1.2E-115 T 13-10-2018 P40_20475 5f98615cbe567e396f2e5c3e817485bd 550 Pfam PF00501 AMP-binding enzyme 18 444 3.1E-85 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_20475 5f98615cbe567e396f2e5c3e817485bd 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 528 3.2E-19 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_20475 5f98615cbe567e396f2e5c3e817485bd 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_20475 5f98615cbe567e396f2e5c3e817485bd 550 SUPERFAMILY SSF56801 7 541 1.44E-133 T 13-10-2018 P40_05240 831d15c8e2bf4647e496beea711f9ec2 142 Gene3D G3DSA:2.60.40.1890 27 141 4.9E-29 T 13-10-2018 IPR036182 Copper chaperone PCuAC superfamily P40_05240 831d15c8e2bf4647e496beea711f9ec2 142 Pfam PF04314 Copper chaperone PCu(A)C 24 128 1.7E-26 T 13-10-2018 IPR007410 Copper chaperone PCuAC P40_05240 831d15c8e2bf4647e496beea711f9ec2 142 SUPERFAMILY SSF110087 3 139 4.58E-36 T 13-10-2018 IPR036182 Copper chaperone PCuAC superfamily P40_04185 278d7c4ac16c389e6a228953bd64df18 177 Gene3D G3DSA:3.40.630.30 16 177 7.7E-53 T 13-10-2018 P40_04185 278d7c4ac16c389e6a228953bd64df18 177 SUPERFAMILY SSF55729 13 145 4.49E-23 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_04185 278d7c4ac16c389e6a228953bd64df18 177 Pfam PF00583 Acetyltransferase (GNAT) family 54 137 5.9E-14 T 13-10-2018 IPR000182 GNAT domain P40_04185 278d7c4ac16c389e6a228953bd64df18 177 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 18 173 2.1E-63 T 13-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 P40_04505 25a0576e4e05d90b71b75590496cca74 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 207 1.1E-4 T 13-10-2018 P40_04505 25a0576e4e05d90b71b75590496cca74 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 129 2.7E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04505 25a0576e4e05d90b71b75590496cca74 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 68 79 2.7E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04505 25a0576e4e05d90b71b75590496cca74 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 159 2.7E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04505 25a0576e4e05d90b71b75590496cca74 241 SUPERFAMILY SSF51735 4 235 2.42E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_04505 25a0576e4e05d90b71b75590496cca74 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 2.4E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04505 25a0576e4e05d90b71b75590496cca74 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.4E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04505 25a0576e4e05d90b71b75590496cca74 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 2.4E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04505 25a0576e4e05d90b71b75590496cca74 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 2.4E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04505 25a0576e4e05d90b71b75590496cca74 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 2.4E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04505 25a0576e4e05d90b71b75590496cca74 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 2.4E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04505 25a0576e4e05d90b71b75590496cca74 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 233 5.1E-50 T 13-10-2018 P40_04505 25a0576e4e05d90b71b75590496cca74 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 127 155 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_04505 25a0576e4e05d90b71b75590496cca74 241 Gene3D G3DSA:3.40.50.720 1 239 1.8E-69 T 13-10-2018 P40_02565 a7cf95a43aa5b305db927aef4ff8db79 229 SUPERFAMILY SSF51206 8 145 1.23E-28 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like P40_02565 a7cf95a43aa5b305db927aef4ff8db79 229 SMART SM00100 14 132 9.3E-16 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_02565 a7cf95a43aa5b305db927aef4ff8db79 229 Pfam PF13545 Crp-like helix-turn-helix domain 152 223 5.1E-15 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 P40_02565 a7cf95a43aa5b305db927aef4ff8db79 229 Gene3D G3DSA:2.60.120.10 3 148 7.1E-28 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_02565 a7cf95a43aa5b305db927aef4ff8db79 229 SMART SM00419 170 218 3.6E-5 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 P40_02565 a7cf95a43aa5b305db927aef4ff8db79 229 Pfam PF00027 Cyclic nucleotide-binding domain 33 120 1.2E-15 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_02565 a7cf95a43aa5b305db927aef4ff8db79 229 SUPERFAMILY SSF46785 149 226 1.16E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_02565 a7cf95a43aa5b305db927aef4ff8db79 229 Gene3D G3DSA:1.10.10.10 150 228 1.2E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_17790 362c08880dda2496237cd6d3eaf2a541 176 Gene3D G3DSA:2.70.70.10 25 171 8.6E-24 T 13-10-2018 IPR011055 Duplicated hybrid motif P40_17790 362c08880dda2496237cd6d3eaf2a541 176 Pfam PF01551 Peptidase family M23 55 142 9.8E-16 T 13-10-2018 IPR016047 Peptidase M23 P40_17790 362c08880dda2496237cd6d3eaf2a541 176 SUPERFAMILY SSF51261 28 143 4.92E-23 T 13-10-2018 IPR011055 Duplicated hybrid motif P40_02205 957218706289c745f07dc17397a1ef93 323 Gene3D G3DSA:3.40.1570.10 16 259 7.7E-33 T 13-10-2018 P40_02205 957218706289c745f07dc17397a1ef93 323 Gene3D G3DSA:3.40.1570.10 61 296 7.7E-33 T 13-10-2018 P40_02205 957218706289c745f07dc17397a1ef93 323 SUPERFAMILY SSF144064 12 304 7.36E-44 T 13-10-2018 P40_16260 cd2b7c2244a1048e6b7121a068bab9a0 96 SUPERFAMILY SSF50129 1 95 3.58E-35 T 13-10-2018 IPR011032 GroES-like superfamily P40_16260 cd2b7c2244a1048e6b7121a068bab9a0 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 13-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 P40_16260 cd2b7c2244a1048e6b7121a068bab9a0 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 2.4E-36 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 P40_16260 cd2b7c2244a1048e6b7121a068bab9a0 96 PRINTS PR00297 10kDa chaperonin signature 3 18 5.8E-32 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 P40_16260 cd2b7c2244a1048e6b7121a068bab9a0 96 PRINTS PR00297 10kDa chaperonin signature 60 72 5.8E-32 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 P40_16260 cd2b7c2244a1048e6b7121a068bab9a0 96 PRINTS PR00297 10kDa chaperonin signature 25 46 5.8E-32 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 P40_16260 cd2b7c2244a1048e6b7121a068bab9a0 96 PRINTS PR00297 10kDa chaperonin signature 81 94 5.8E-32 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 P40_16260 cd2b7c2244a1048e6b7121a068bab9a0 96 SMART SM00883 2 94 1.1E-58 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 P40_16260 cd2b7c2244a1048e6b7121a068bab9a0 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.326 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 P40_16260 cd2b7c2244a1048e6b7121a068bab9a0 96 Gene3D G3DSA:2.30.33.40 1 96 2.6E-38 T 13-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 P40_06605 3b7843038aa8b0e58eaed9d1ccf8a4c2 397 SUPERFAMILY SSF53383 5 382 6.66E-113 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_06605 3b7843038aa8b0e58eaed9d1ccf8a4c2 397 Gene3D G3DSA:3.90.1150.10 289 386 7.7E-132 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_06605 3b7843038aa8b0e58eaed9d1ccf8a4c2 397 Pfam PF00155 Aminotransferase class I and II 32 375 1.1E-63 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_06605 3b7843038aa8b0e58eaed9d1ccf8a4c2 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 P40_06605 3b7843038aa8b0e58eaed9d1ccf8a4c2 397 Gene3D G3DSA:3.40.640.10 64 288 7.7E-132 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_02210 b95c3914e404ba21d5879fe49528dd8e 637 SUPERFAMILY SSF52540 294 513 1.66E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_02210 b95c3914e404ba21d5879fe49528dd8e 637 Pfam PF00005 ABC transporter 17 178 6.2E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_02210 b95c3914e404ba21d5879fe49528dd8e 637 SMART SM00382 26 223 2.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_02210 b95c3914e404ba21d5879fe49528dd8e 637 SMART SM00382 337 504 1.5E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_02210 b95c3914e404ba21d5879fe49528dd8e 637 Gene3D G3DSA:3.40.50.300 7 274 9.9E-59 T 13-10-2018 P40_02210 b95c3914e404ba21d5879fe49528dd8e 637 Gene3D G3DSA:3.40.50.300 275 539 3.6E-52 T 13-10-2018 P40_02210 b95c3914e404ba21d5879fe49528dd8e 637 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_02210 b95c3914e404ba21d5879fe49528dd8e 637 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_02210 b95c3914e404ba21d5879fe49528dd8e 637 Pfam PF00005 ABC transporter 328 459 1.1E-18 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_02210 b95c3914e404ba21d5879fe49528dd8e 637 SUPERFAMILY SSF52540 2 254 1.75E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_02210 b95c3914e404ba21d5879fe49528dd8e 637 Pfam PF12848 ABC transporter 217 300 1.3E-29 T 13-10-2018 IPR032781 ABC-transporter extension domain P40_12765 62657cfffe6852bdf5b936a194f85d41 417 SUPERFAMILY SSF53244 278 410 3.66E-21 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 P40_12765 62657cfffe6852bdf5b936a194f85d41 417 Gene3D G3DSA:3.40.1190.10 1 278 5.8E-75 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 P40_12765 62657cfffe6852bdf5b936a194f85d41 417 Gene3D G3DSA:3.90.190.20 279 412 8.1E-24 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 P40_12765 62657cfffe6852bdf5b936a194f85d41 417 SUPERFAMILY SSF53623 3 261 1.1E-67 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 P40_12765 62657cfffe6852bdf5b936a194f85d41 417 Pfam PF08245 Mur ligase middle domain 45 182 3.3E-9 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 P40_12765 62657cfffe6852bdf5b936a194f85d41 417 TIGRFAM TIGR01499 folC: bifunctional protein FolC 23 407 4.1E-72 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 P40_18695 065ba28b122e92f7351d30c8a6a92bb4 249 Pfam PF00121 Triosephosphate isomerase 6 245 9.1E-90 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_18695 065ba28b122e92f7351d30c8a6a92bb4 249 Gene3D G3DSA:3.20.20.70 1 249 1.0E-97 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_18695 065ba28b122e92f7351d30c8a6a92bb4 249 SUPERFAMILY SSF51351 3 247 9.29E-91 T 13-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_18695 065ba28b122e92f7351d30c8a6a92bb4 249 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 13-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_18695 065ba28b122e92f7351d30c8a6a92bb4 249 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 239 4.9E-67 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_18695 065ba28b122e92f7351d30c8a6a92bb4 249 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 247 59.464 T 13-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_15210 3cc830b695f97c41f8d0999e20305dbe 456 SMART SM00490 258 339 1.1E-29 T 13-10-2018 IPR001650 Helicase, C-terminal P40_15210 3cc830b695f97c41f8d0999e20305dbe 456 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 456 48.811 T 13-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 P40_15210 3cc830b695f97c41f8d0999e20305dbe 456 SUPERFAMILY SSF52540 73 357 3.4E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_15210 3cc830b695f97c41f8d0999e20305dbe 456 Gene3D G3DSA:3.40.50.300 214 389 1.3E-47 T 13-10-2018 P40_15210 3cc830b695f97c41f8d0999e20305dbe 456 Gene3D G3DSA:3.40.50.300 1 210 6.7E-74 T 13-10-2018 P40_15210 3cc830b695f97c41f8d0999e20305dbe 456 SMART SM00487 20 222 7.0E-63 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_15210 3cc830b695f97c41f8d0999e20305dbe 456 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site P40_15210 3cc830b695f97c41f8d0999e20305dbe 456 Pfam PF00270 DEAD/DEAH box helicase 26 194 4.8E-49 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 P40_15210 3cc830b695f97c41f8d0999e20305dbe 456 Pfam PF00271 Helicase conserved C-terminal domain 233 339 4.4E-25 T 13-10-2018 IPR001650 Helicase, C-terminal P40_18630 bf186094bd2cd204b8cb9f4aa87bbca1 531 Gene3D G3DSA:3.40.50.12780 8 415 1.5E-95 T 13-10-2018 P40_18630 bf186094bd2cd204b8cb9f4aa87bbca1 531 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_18630 bf186094bd2cd204b8cb9f4aa87bbca1 531 Gene3D G3DSA:3.30.300.30 418 528 1.6E-18 T 13-10-2018 P40_18630 bf186094bd2cd204b8cb9f4aa87bbca1 531 Pfam PF00501 AMP-binding enzyme 21 420 1.2E-77 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_18630 bf186094bd2cd204b8cb9f4aa87bbca1 531 SUPERFAMILY SSF56801 13 506 4.45E-119 T 13-10-2018 P40_18630 bf186094bd2cd204b8cb9f4aa87bbca1 531 Pfam PF13193 AMP-binding enzyme C-terminal domain 431 504 2.9E-13 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_19985 f1cff856cea92fdbf61ef9cad4454cc3 650 Pfam PF07732 Multicopper oxidase 56 164 1.1E-39 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 P40_19985 f1cff856cea92fdbf61ef9cad4454cc3 650 SUPERFAMILY SSF49503 485 636 2.24E-36 T 13-10-2018 IPR008972 Cupredoxin P40_19985 f1cff856cea92fdbf61ef9cad4454cc3 650 ProSitePatterns PS00080 Multicopper oxidases signature 2. 619 630 - T 13-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 P40_19985 f1cff856cea92fdbf61ef9cad4454cc3 650 SUPERFAMILY SSF49503 49 188 2.9E-40 T 13-10-2018 IPR008972 Cupredoxin P40_19985 f1cff856cea92fdbf61ef9cad4454cc3 650 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 6 407 1.2E-179 T 13-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 P40_19985 f1cff856cea92fdbf61ef9cad4454cc3 650 ProSitePatterns PS00079 Multicopper oxidases signature 1. 139 159 - T 13-10-2018 IPR033138 Multicopper oxidases, conserved site P40_19985 f1cff856cea92fdbf61ef9cad4454cc3 650 Gene3D G3DSA:2.60.40.420 511 644 1.0E-27 T 13-10-2018 IPR008972 Cupredoxin P40_19985 f1cff856cea92fdbf61ef9cad4454cc3 650 ProSitePatterns PS00079 Multicopper oxidases signature 1. 614 634 - T 13-10-2018 IPR033138 Multicopper oxidases, conserved site P40_19985 f1cff856cea92fdbf61ef9cad4454cc3 650 Pfam PF07731 Multicopper oxidase 521 638 2.1E-23 T 13-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 P40_19985 f1cff856cea92fdbf61ef9cad4454cc3 650 Gene3D G3DSA:2.60.40.420 31 163 2.6E-39 T 13-10-2018 IPR008972 Cupredoxin P40_19985 f1cff856cea92fdbf61ef9cad4454cc3 650 SUPERFAMILY SSF49503 168 383 2.35E-50 T 13-10-2018 IPR008972 Cupredoxin P40_19985 f1cff856cea92fdbf61ef9cad4454cc3 650 Gene3D G3DSA:2.60.40.420 169 370 2.9E-34 T 13-10-2018 IPR008972 Cupredoxin P40_19985 f1cff856cea92fdbf61ef9cad4454cc3 650 Pfam PF00394 Multicopper oxidase 174 348 2.5E-25 T 13-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 P40_04935 edcef49df78a52411bb07b36a005c85d 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 P40_04935 edcef49df78a52411bb07b36a005c85d 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.915 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 P40_04935 edcef49df78a52411bb07b36a005c85d 176 Gene3D G3DSA:3.90.80.10 1 175 7.0E-73 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 P40_04935 edcef49df78a52411bb07b36a005c85d 176 SUPERFAMILY SSF50324 3 174 4.19E-68 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 P40_04935 edcef49df78a52411bb07b36a005c85d 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.5E-55 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 P40_21395 4d74dd0ea038ca93e91a9ccae2fd3b02 550 SUPERFAMILY SSF56645 82 284 1.31E-32 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_21395 4d74dd0ea038ca93e91a9ccae2fd3b02 550 Gene3D G3DSA:1.20.140.10 278 433 4.5E-33 T 13-10-2018 P40_21395 4d74dd0ea038ca93e91a9ccae2fd3b02 550 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 277 431 1.7E-21 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_21395 4d74dd0ea038ca93e91a9ccae2fd3b02 550 Gene3D G3DSA:2.40.110.20 128 277 7.6E-51 T 13-10-2018 P40_21395 4d74dd0ea038ca93e91a9ccae2fd3b02 550 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 169 264 3.7E-17 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_21395 4d74dd0ea038ca93e91a9ccae2fd3b02 550 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 390 409 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_21395 4d74dd0ea038ca93e91a9ccae2fd3b02 550 SUPERFAMILY SSF47203 276 435 4.19E-33 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_10810 6cce603239f5bc73b0db75df447b2585 320 Gene3D G3DSA:3.30.460.20 2 131 2.7E-40 T 13-10-2018 P40_10810 6cce603239f5bc73b0db75df447b2585 320 SUPERFAMILY SSF143865 29 253 3.53E-49 T 13-10-2018 P40_10810 6cce603239f5bc73b0db75df447b2585 320 Gene3D G3DSA:1.20.58.340 263 320 2.7E-11 T 13-10-2018 P40_10810 6cce603239f5bc73b0db75df447b2585 320 Pfam PF01544 CorA-like Mg2+ transporter protein 32 316 3.9E-66 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 P40_10810 6cce603239f5bc73b0db75df447b2585 320 Gene3D G3DSA:1.20.58.340 132 259 2.8E-31 T 13-10-2018 P40_10810 6cce603239f5bc73b0db75df447b2585 320 SUPERFAMILY SSF144083 256 317 3.14E-15 T 13-10-2018 P40_20440 f7c7e6c41c0884e2f660684e93d89c5a 401 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 122 2.3E-21 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_20440 f7c7e6c41c0884e2f660684e93d89c5a 401 SUPERFAMILY SSF56645 8 246 3.27E-68 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_20440 f7c7e6c41c0884e2f660684e93d89c5a 401 Gene3D G3DSA:1.20.140.10 237 401 4.1E-32 T 13-10-2018 P40_20440 f7c7e6c41c0884e2f660684e93d89c5a 401 Gene3D G3DSA:2.40.110.10 126 236 2.3E-32 T 13-10-2018 P40_20440 f7c7e6c41c0884e2f660684e93d89c5a 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 221 1.7E-19 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_20440 f7c7e6c41c0884e2f660684e93d89c5a 401 Gene3D G3DSA:1.10.540.10 5 121 2.3E-28 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_20440 f7c7e6c41c0884e2f660684e93d89c5a 401 SUPERFAMILY SSF47203 233 401 2.24E-19 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_20440 f7c7e6c41c0884e2f660684e93d89c5a 401 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 399 6.8E-20 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_08655 a77f03516ceeb57814a2a132e9d107b3 204 Pfam PF00717 Peptidase S24-like 118 184 7.8E-15 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C P40_08655 a77f03516ceeb57814a2a132e9d107b3 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.8E-9 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 P40_08655 a77f03516ceeb57814a2a132e9d107b3 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 1.8E-9 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 P40_08655 a77f03516ceeb57814a2a132e9d107b3 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 1.8E-9 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 P40_08655 a77f03516ceeb57814a2a132e9d107b3 204 SUPERFAMILY SSF46785 4 71 4.77E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_08655 a77f03516ceeb57814a2a132e9d107b3 204 SUPERFAMILY SSF51306 80 200 1.06E-34 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily P40_08655 a77f03516ceeb57814a2a132e9d107b3 204 Pfam PF01726 LexA DNA binding domain 3 66 3.6E-24 T 13-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 P40_08655 a77f03516ceeb57814a2a132e9d107b3 204 TIGRFAM TIGR00498 lexA: repressor LexA 3 200 2.4E-63 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 P40_08655 a77f03516ceeb57814a2a132e9d107b3 204 Hamap MF_00015 LexA repressor [lexA]. 4 201 31.691 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 P40_08655 a77f03516ceeb57814a2a132e9d107b3 204 Gene3D G3DSA:1.10.10.10 2 71 1.4E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_08655 a77f03516ceeb57814a2a132e9d107b3 204 Gene3D G3DSA:2.10.109.10 84 202 3.7E-40 T 13-10-2018 P40_03085 83a86869a66dceda55ac3146036d1f69 484 Pfam PF02321 Outer membrane efflux protein 234 445 1.2E-32 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_03085 83a86869a66dceda55ac3146036d1f69 484 Pfam PF02321 Outer membrane efflux protein 39 211 8.4E-27 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_03085 83a86869a66dceda55ac3146036d1f69 484 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 460 1.7E-96 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 P40_03085 83a86869a66dceda55ac3146036d1f69 484 Gene3D G3DSA:1.20.1600.10 23 466 1.0E-104 T 13-10-2018 P40_03085 83a86869a66dceda55ac3146036d1f69 484 SUPERFAMILY SSF56954 3 449 6.02E-84 T 13-10-2018 P40_06790 70f79d0c6d6df3c35a9b30a11adfee72 428 SUPERFAMILY SSF53901 284 428 8.44E-28 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_06790 70f79d0c6d6df3c35a9b30a11adfee72 428 Pfam PF00108 Thiolase, N-terminal domain 10 278 2.2E-48 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 P40_06790 70f79d0c6d6df3c35a9b30a11adfee72 428 Gene3D G3DSA:3.40.47.10 3 428 5.6E-103 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_06790 70f79d0c6d6df3c35a9b30a11adfee72 428 PIRSF PIRSF000429 5 428 8.4E-103 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_06790 70f79d0c6d6df3c35a9b30a11adfee72 428 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 12 427 8.8E-115 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_06790 70f79d0c6d6df3c35a9b30a11adfee72 428 SUPERFAMILY SSF53901 10 285 1.04E-55 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_06790 70f79d0c6d6df3c35a9b30a11adfee72 428 Pfam PF02803 Thiolase, C-terminal domain 287 428 1.5E-30 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_15455 913d5fee3087d3f1e6197e38b9bacd37 490 Pfam PF00171 Aldehyde dehydrogenase family 27 484 1.8E-167 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_15455 913d5fee3087d3f1e6197e38b9bacd37 490 SUPERFAMILY SSF53720 12 488 1.57E-169 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_15455 913d5fee3087d3f1e6197e38b9bacd37 490 Gene3D G3DSA:3.40.309.10 267 456 1.2E-180 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_15455 913d5fee3087d3f1e6197e38b9bacd37 490 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 36 483 4.1E-212 T 13-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 P40_15455 913d5fee3087d3f1e6197e38b9bacd37 490 Gene3D G3DSA:3.40.605.10 33 480 1.2E-180 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_15455 913d5fee3087d3f1e6197e38b9bacd37 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 P40_15455 913d5fee3087d3f1e6197e38b9bacd37 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 289 300 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 P40_04540 a69a42626dd7078f832c6ef65283cab7 371 PIRSF PIRSF029171 1 370 1.1E-92 T 13-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 P40_04540 a69a42626dd7078f832c6ef65283cab7 371 Pfam PF03583 Secretory lipase 110 364 1.1E-16 T 13-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 P40_04540 a69a42626dd7078f832c6ef65283cab7 371 Gene3D G3DSA:3.40.50.1820 1 214 6.2E-65 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_04540 a69a42626dd7078f832c6ef65283cab7 371 Gene3D G3DSA:3.40.50.1820 268 370 7.9E-9 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_04540 a69a42626dd7078f832c6ef65283cab7 371 SUPERFAMILY SSF53474 47 336 4.96E-24 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_14095 28513290dfdb3a8feaf6e409bde8b79e 442 SUPERFAMILY SSF103473 20 425 3.79E-56 T 13-10-2018 IPR036259 MFS transporter superfamily P40_14095 28513290dfdb3a8feaf6e409bde8b79e 442 Gene3D G3DSA:1.20.1250.20 16 427 1.3E-55 T 13-10-2018 P40_14095 28513290dfdb3a8feaf6e409bde8b79e 442 Pfam PF00083 Sugar (and other) transporter 21 220 4.5E-23 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 Gene3D G3DSA:2.40.50.100 287 323 5.3E-14 T 13-10-2018 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 23 46 9.0E-54 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 414 434 9.0E-54 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 332 356 9.0E-54 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 356 379 9.0E-54 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 299 320 9.0E-54 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 85 9.0E-54 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 399 414 9.0E-54 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 Gene3D G3DSA:2.40.50.100 56 122 4.5E-7 T 13-10-2018 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 Pfam PF13437 HlyD family secretion protein 287 389 4.0E-18 T 13-10-2018 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 SUPERFAMILY SSF111369 229 337 1.27E-6 T 13-10-2018 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 Gene3D G3DSA:1.10.287.470 182 286 5.3E-14 T 13-10-2018 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 SUPERFAMILY SSF111369 57 113 1.31E-5 T 13-10-2018 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 18 432 5.8E-110 T 13-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 Gene3D G3DSA:2.40.30.170 324 412 5.3E-14 T 13-10-2018 P40_13415 50cb74cd916ec77caa8fa108739bdb26 435 Pfam PF13533 Biotin-lipoyl like 57 97 1.4E-6 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain P40_04145 385d73439fa1550fed2ed2c908f0fc49 598 Pfam PF00474 Sodium:solute symporter family 33 308 1.5E-33 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 P40_04145 385d73439fa1550fed2ed2c908f0fc49 598 Pfam PF00474 Sodium:solute symporter family 405 520 6.1E-18 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 P40_04145 385d73439fa1550fed2ed2c908f0fc49 598 Gene3D G3DSA:1.20.1730.10 377 586 8.1E-28 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily P40_04145 385d73439fa1550fed2ed2c908f0fc49 598 Gene3D G3DSA:1.20.1730.10 5 328 1.3E-35 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily P40_04145 385d73439fa1550fed2ed2c908f0fc49 598 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 589 1.2E-262 T 13-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily P40_01160 28fe078f28743f59fdc9c6276a1fbc5c 401 SMART SM00962 196 397 1.0E-121 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P40_01160 28fe078f28743f59fdc9c6276a1fbc5c 401 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 125 396 1.4E-108 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 P40_01160 28fe078f28743f59fdc9c6276a1fbc5c 401 Pfam PF02881 SRP54-type protein, helical bundle domain 111 177 4.6E-13 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P40_01160 28fe078f28743f59fdc9c6276a1fbc5c 401 Gene3D G3DSA:1.20.120.140 98 395 1.0E-114 T 13-10-2018 P40_01160 28fe078f28743f59fdc9c6276a1fbc5c 401 SMART SM00963 100 181 7.3E-24 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P40_01160 28fe078f28743f59fdc9c6276a1fbc5c 401 SMART SM00382 195 375 3.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_01160 28fe078f28743f59fdc9c6276a1fbc5c 401 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 370 383 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P40_01160 28fe078f28743f59fdc9c6276a1fbc5c 401 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 124 397 61.215 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 P40_01160 28fe078f28743f59fdc9c6276a1fbc5c 401 Pfam PF00448 SRP54-type protein, GTPase domain 196 396 2.8E-77 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P40_01160 28fe078f28743f59fdc9c6276a1fbc5c 401 SUPERFAMILY SSF52540 194 397 2.05E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_01160 28fe078f28743f59fdc9c6276a1fbc5c 401 SUPERFAMILY SSF47364 95 175 3.27E-20 T 13-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 P40_01160 28fe078f28743f59fdc9c6276a1fbc5c 401 Gene3D G3DSA:3.40.50.300 196 385 1.0E-114 T 13-10-2018 P40_01790 9fa2c925b52915aa3232dede64fbf025 111 SUPERFAMILY SSF57783 3 36 2.04E-14 T 13-10-2018 P40_01790 9fa2c925b52915aa3232dede64fbf025 111 Gene3D G3DSA:2.30.30.40 42 111 1.9E-35 T 13-10-2018 P40_01790 9fa2c925b52915aa3232dede64fbf025 111 Gene3D G3DSA:2.20.25.10 1 41 2.3E-19 T 13-10-2018 P40_01790 9fa2c925b52915aa3232dede64fbf025 111 SUPERFAMILY SSF82057 40 111 1.05E-29 T 13-10-2018 P40_01790 9fa2c925b52915aa3232dede64fbf025 111 Pfam PF03831 PhnA domain 44 111 2.6E-34 T 13-10-2018 IPR013988 PhnA protein, C-terminal P40_01790 9fa2c925b52915aa3232dede64fbf025 111 Pfam PF08274 PhnA Zinc-Ribbon 3 31 1.4E-15 T 13-10-2018 IPR013987 PhnA protein, N-terminal P40_01790 9fa2c925b52915aa3232dede64fbf025 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 111 2.7E-51 T 13-10-2018 IPR004624 PhnA protein P40_14230 016cf86e974c4d2ec81492555f2c1dce 236 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 12 199 4.3E-55 T 13-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein P40_14230 016cf86e974c4d2ec81492555f2c1dce 236 Gene3D G3DSA:3.20.20.70 11 215 1.4E-30 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_14230 016cf86e974c4d2ec81492555f2c1dce 236 Pfam PF04055 Radical SAM superfamily 30 160 1.6E-16 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P40_14230 016cf86e974c4d2ec81492555f2c1dce 236 Pfam PF13353 4Fe-4S single cluster domain 24 101 1.4E-9 T 13-10-2018 P40_14230 016cf86e974c4d2ec81492555f2c1dce 236 SUPERFAMILY SSF102114 23 201 6.41E-25 T 13-10-2018 P40_15355 320ab390880c14c66b0609952b3c0f62 547 SUPERFAMILY SSF52518 356 533 1.84E-58 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold P40_15355 320ab390880c14c66b0609952b3c0f62 547 SUPERFAMILY SSF52467 179 362 1.12E-41 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily P40_15355 320ab390880c14c66b0609952b3c0f62 547 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 320 3.3E-31 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 P40_15355 320ab390880c14c66b0609952b3c0f62 547 SUPERFAMILY SSF52518 1 180 5.44E-48 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold P40_15355 320ab390880c14c66b0609952b3c0f62 547 Gene3D G3DSA:3.40.50.1220 181 348 1.7E-38 T 13-10-2018 P40_15355 320ab390880c14c66b0609952b3c0f62 547 Gene3D G3DSA:3.40.50.970 1 173 1.1E-55 T 13-10-2018 P40_15355 320ab390880c14c66b0609952b3c0f62 547 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 166 7.1E-52 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 P40_15355 320ab390880c14c66b0609952b3c0f62 547 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 P40_15355 320ab390880c14c66b0609952b3c0f62 547 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 524 1.1E-38 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 P40_15355 320ab390880c14c66b0609952b3c0f62 547 Gene3D G3DSA:3.40.50.970 349 545 7.5E-55 T 13-10-2018 P40_15265 ca1d5a1c321b32791568231ad4c03fec 222 Pfam PF00929 Exonuclease 18 192 1.9E-33 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III P40_15265 ca1d5a1c321b32791568231ad4c03fec 222 Hamap MF_00157 Ribonuclease T [rnt]. 1 222 103.007 T 13-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 P40_15265 ca1d5a1c321b32791568231ad4c03fec 222 SMART SM00479 16 201 9.2E-26 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III P40_15265 ca1d5a1c321b32791568231ad4c03fec 222 SUPERFAMILY SSF53098 8 205 1.25E-56 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_15265 ca1d5a1c321b32791568231ad4c03fec 222 TIGRFAM TIGR01298 RNaseT: ribonuclease T 9 206 8.4E-99 T 13-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 P40_15265 ca1d5a1c321b32791568231ad4c03fec 222 Gene3D G3DSA:3.30.420.10 8 208 7.6E-52 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_13200 e1e88712a72d7c8c940fbe1815c03bc0 308 SUPERFAMILY SSF52151 4 306 1.05E-79 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase P40_13200 e1e88712a72d7c8c940fbe1815c03bc0 308 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 308 6.7E-40 T 13-10-2018 IPR020801 Polyketide synthase, acyl transferase domain P40_13200 e1e88712a72d7c8c940fbe1815c03bc0 308 SUPERFAMILY SSF55048 127 196 5.62E-18 T 13-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding P40_13200 e1e88712a72d7c8c940fbe1815c03bc0 308 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 289 7.4E-112 T 13-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 P40_13200 e1e88712a72d7c8c940fbe1815c03bc0 308 PIRSF PIRSF000446 1 308 1.9E-119 T 13-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 P40_13200 e1e88712a72d7c8c940fbe1815c03bc0 308 Gene3D G3DSA:3.40.366.10 6 285 9.3E-103 T 13-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 P40_13200 e1e88712a72d7c8c940fbe1815c03bc0 308 Pfam PF00698 Acyl transferase domain 6 276 1.9E-38 T 13-10-2018 IPR014043 Acyl transferase P40_13200 e1e88712a72d7c8c940fbe1815c03bc0 308 Gene3D G3DSA:3.30.70.250 124 196 9.3E-103 T 13-10-2018 P40_12815 41417a704bd2bf9ebebd2f6bb38a34d1 217 Gene3D G3DSA:3.20.19.10 1 184 1.8E-81 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 P40_12815 41417a704bd2bf9ebebd2f6bb38a34d1 217 SUPERFAMILY SSF52016 1 204 2.75E-64 T 13-10-2018 P40_12815 41417a704bd2bf9ebebd2f6bb38a34d1 217 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 5.7E-91 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 P40_12815 41417a704bd2bf9ebebd2f6bb38a34d1 217 Pfam PF00694 Aconitase C-terminal domain 1 132 7.2E-40 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 P40_12815 41417a704bd2bf9ebebd2f6bb38a34d1 217 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 46.057 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 P40_09680 b89294ef35148df53927d4592970bdf3 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 379 1.8E-49 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_09680 b89294ef35148df53927d4592970bdf3 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 3.2E-29 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_09680 b89294ef35148df53927d4592970bdf3 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 117 4.4E-29 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_09680 b89294ef35148df53927d4592970bdf3 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_09680 b89294ef35148df53927d4592970bdf3 383 Gene3D G3DSA:1.10.540.10 3 118 4.0E-30 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_09680 b89294ef35148df53927d4592970bdf3 383 SUPERFAMILY SSF47203 229 381 1.11E-56 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_09680 b89294ef35148df53927d4592970bdf3 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_09680 b89294ef35148df53927d4592970bdf3 383 SUPERFAMILY SSF56645 6 243 1.83E-79 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_09680 b89294ef35148df53927d4592970bdf3 383 PIRSF PIRSF016578 125 362 3.0E-14 T 13-10-2018 P40_09680 b89294ef35148df53927d4592970bdf3 383 PIRSF PIRSF016578 1 95 5.0E-7 T 13-10-2018 P40_09680 b89294ef35148df53927d4592970bdf3 383 Gene3D G3DSA:2.40.110.10 120 236 1.1E-43 T 13-10-2018 P40_09680 b89294ef35148df53927d4592970bdf3 383 Gene3D G3DSA:1.20.140.10 237 382 4.0E-56 T 13-10-2018 P40_05325 876b4e4bf6a1dc70eb48415582e7ad45 510 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 452 2.2E-65 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 P40_05325 876b4e4bf6a1dc70eb48415582e7ad45 510 Gene3D G3DSA:1.20.1730.10 8 499 1.3E-106 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily P40_05325 876b4e4bf6a1dc70eb48415582e7ad45 510 Pfam PF00474 Sodium:solute symporter family 35 452 1.1E-43 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 P40_12710 1b0c77756124867b3eb15704b612ed02 298 Hamap MF_00188 Protease HtpX [htpX]. 1 295 24.878 T 13-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 P40_12710 1b0c77756124867b3eb15704b612ed02 298 Gene3D G3DSA:3.30.2010.10 72 165 2.8E-32 T 13-10-2018 P40_12710 1b0c77756124867b3eb15704b612ed02 298 Pfam PF01435 Peptidase family M48 82 294 9.5E-38 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 P40_20230 3504bd8f5ba516ae86251d0002b7b03d 213 Pfam PF00753 Metallo-beta-lactamase superfamily 12 192 2.1E-31 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_20230 3504bd8f5ba516ae86251d0002b7b03d 213 SUPERFAMILY SSF56281 3 208 1.83E-59 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_20230 3504bd8f5ba516ae86251d0002b7b03d 213 Gene3D G3DSA:3.60.15.10 1 210 1.3E-78 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_20230 3504bd8f5ba516ae86251d0002b7b03d 213 SMART SM00849 12 192 1.2E-36 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_05805 ec2a9e31ee49b2f177ab8900f8f9b9ad 318 Gene3D G3DSA:1.20.1530.20 2 310 3.0E-27 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily P40_05805 ec2a9e31ee49b2f177ab8900f8f9b9ad 318 Pfam PF01758 Sodium Bile acid symporter family 40 218 1.3E-13 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 P40_20590 fe2a5764278e559f4ca308b986644394 537 SUPERFAMILY SSF56801 21 530 1.2E-150 T 13-10-2018 P40_20590 fe2a5764278e559f4ca308b986644394 537 Gene3D G3DSA:3.40.50.12780 14 430 3.7E-119 T 13-10-2018 P40_20590 fe2a5764278e559f4ca308b986644394 537 Pfam PF13193 AMP-binding enzyme C-terminal domain 444 519 3.5E-12 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_20590 fe2a5764278e559f4ca308b986644394 537 Pfam PF00501 AMP-binding enzyme 34 435 2.6E-104 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_20590 fe2a5764278e559f4ca308b986644394 537 Gene3D G3DSA:3.30.300.310 431 535 7.9E-24 T 13-10-2018 P40_20590 fe2a5764278e559f4ca308b986644394 537 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_08750 38b495f7e4093a9ff9f099e803cbcc4f 407 Gene3D G3DSA:2.40.30.10 199 349 1.1E-121 T 13-10-2018 P40_08750 38b495f7e4093a9ff9f099e803cbcc4f 407 SUPERFAMILY SSF51905 1 404 1.53E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_08750 38b495f7e4093a9ff9f099e803cbcc4f 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 379 7.9E-5 T 13-10-2018 P40_08750 38b495f7e4093a9ff9f099e803cbcc4f 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 163 181 7.9E-5 T 13-10-2018 P40_08750 38b495f7e4093a9ff9f099e803cbcc4f 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 7.9E-5 T 13-10-2018 P40_08750 38b495f7e4093a9ff9f099e803cbcc4f 407 Gene3D G3DSA:3.50.50.60 7 401 1.1E-121 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_08750 38b495f7e4093a9ff9f099e803cbcc4f 407 Pfam PF03486 HI0933-like protein 5 402 5.4E-137 T 13-10-2018 P40_08750 38b495f7e4093a9ff9f099e803cbcc4f 407 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 402 6.3E-120 T 13-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like P40_08750 38b495f7e4093a9ff9f099e803cbcc4f 407 Gene3D G3DSA:1.10.8.260 274 332 1.1E-121 T 13-10-2018 IPR023166 HI0933-like insert domain superfamily P40_08750 38b495f7e4093a9ff9f099e803cbcc4f 407 SUPERFAMILY SSF160996 201 350 4.84E-35 T 13-10-2018 P40_08750 38b495f7e4093a9ff9f099e803cbcc4f 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 372 379 4.6E-7 T 13-10-2018 P40_08750 38b495f7e4093a9ff9f099e803cbcc4f 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.6E-7 T 13-10-2018 P40_08750 38b495f7e4093a9ff9f099e803cbcc4f 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 166 175 4.6E-7 T 13-10-2018 P40_06915 529d06021f193df10b90905061a9b7f0 236 SUPERFAMILY SSF52172 8 191 1.71E-40 T 13-10-2018 IPR011006 CheY-like superfamily P40_06915 529d06021f193df10b90905061a9b7f0 236 SMART SM00448 9 119 1.3E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_06915 529d06021f193df10b90905061a9b7f0 236 Gene3D G3DSA:3.40.50.2300 9 134 1.3E-35 T 13-10-2018 P40_06915 529d06021f193df10b90905061a9b7f0 236 Gene3D G3DSA:1.10.10.10 135 235 3.2E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_06915 529d06021f193df10b90905061a9b7f0 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 231 5.8E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_06915 529d06021f193df10b90905061a9b7f0 236 Pfam PF00072 Response regulator receiver domain 12 119 1.2E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_06915 529d06021f193df10b90905061a9b7f0 236 SMART SM00862 155 231 4.5E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_04675 c1498c692364d8592f5989209e34619a 432 SUPERFAMILY SSF54534 286 388 1.05E-29 T 13-10-2018 P40_04675 c1498c692364d8592f5989209e34619a 432 SUPERFAMILY SSF109998 28 204 2.35E-43 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily P40_04675 c1498c692364d8592f5989209e34619a 432 Gene3D G3DSA:3.10.50.40 175 277 2.2E-75 T 13-10-2018 P40_04675 c1498c692364d8592f5989209e34619a 432 Hamap MF_01183 Chaperone SurA [surA]. 9 431 33.645 T 13-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 P40_04675 c1498c692364d8592f5989209e34619a 432 Pfam PF13616 PPIC-type PPIASE domain 287 386 1.1E-23 T 13-10-2018 P40_04675 c1498c692364d8592f5989209e34619a 432 Gene3D G3DSA:3.10.50.40 283 423 2.6E-37 T 13-10-2018 P40_04675 c1498c692364d8592f5989209e34619a 432 SUPERFAMILY SSF54534 177 279 1.24E-28 T 13-10-2018 P40_04675 c1498c692364d8592f5989209e34619a 432 Gene3D G3DSA:1.10.4030.30 29 279 2.2E-75 T 13-10-2018 P40_04675 c1498c692364d8592f5989209e34619a 432 Pfam PF00639 PPIC-type PPIASE domain 181 274 2.4E-21 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 P40_04675 c1498c692364d8592f5989209e34619a 432 Pfam PF09312 SurA N-terminal domain 28 145 3.0E-42 T 13-10-2018 IPR015391 SurA N-terminal P40_09475 9476de3a9e7d153090e9191718eb6458 772 Pfam PF09397 Ftsk gamma domain 706 766 5.9E-26 T 13-10-2018 IPR018541 FtsK gamma domain P40_09475 9476de3a9e7d153090e9191718eb6458 772 SMART SM00843 704 769 2.9E-39 T 13-10-2018 IPR018541 FtsK gamma domain P40_09475 9476de3a9e7d153090e9191718eb6458 772 SUPERFAMILY SSF46785 704 768 3.13E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_09475 9476de3a9e7d153090e9191718eb6458 772 SUPERFAMILY SSF52540 356 671 8.9E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_09475 9476de3a9e7d153090e9191718eb6458 772 Pfam PF01580 FtsK/SpoIIIE family 385 598 8.8E-66 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 P40_09475 9476de3a9e7d153090e9191718eb6458 772 Gene3D G3DSA:3.30.980.40 274 379 2.1E-35 T 13-10-2018 P40_09475 9476de3a9e7d153090e9191718eb6458 772 Gene3D G3DSA:1.10.10.10 708 771 3.2E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_09475 9476de3a9e7d153090e9191718eb6458 772 Gene3D G3DSA:3.40.50.300 380 684 1.4E-119 T 13-10-2018 P40_09475 9476de3a9e7d153090e9191718eb6458 772 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 21 191 5.0E-38 T 13-10-2018 IPR025199 DNA translocase FtsK, 4TM region P40_03420 1d61bd17f64dbe03ffd4a32d5db052fb 209 PIRSF PIRSF000190 1 209 4.5E-73 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 P40_03420 1d61bd17f64dbe03ffd4a32d5db052fb 209 SUPERFAMILY SSF50475 11 209 1.07E-60 T 13-10-2018 P40_03420 1d61bd17f64dbe03ffd4a32d5db052fb 209 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 7 209 34.125 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 P40_03420 1d61bd17f64dbe03ffd4a32d5db052fb 209 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 169 209 4.5E-19 T 13-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 P40_03420 1d61bd17f64dbe03ffd4a32d5db052fb 209 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 209 2.3E-74 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 P40_03420 1d61bd17f64dbe03ffd4a32d5db052fb 209 Gene3D G3DSA:2.30.110.10 1 209 1.6E-74 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 P40_03420 1d61bd17f64dbe03ffd4a32d5db052fb 209 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 38 115 3.1E-20 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 P40_21365 efc0c1dd05b99925f65839da6252e595 564 SUPERFAMILY SSF52540 5 255 2.95E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_21365 efc0c1dd05b99925f65839da6252e595 564 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_21365 efc0c1dd05b99925f65839da6252e595 564 SMART SM00382 320 522 1.1E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_21365 efc0c1dd05b99925f65839da6252e595 564 SMART SM00382 34 233 4.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_21365 efc0c1dd05b99925f65839da6252e595 564 SUPERFAMILY SSF52540 280 542 3.24E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_21365 efc0c1dd05b99925f65839da6252e595 564 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 267 5.9E-8 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 P40_21365 efc0c1dd05b99925f65839da6252e595 564 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 516 543 1.6E-5 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 P40_21365 efc0c1dd05b99925f65839da6252e595 564 Gene3D G3DSA:3.40.50.300 3 286 7.7E-84 T 13-10-2018 P40_21365 efc0c1dd05b99925f65839da6252e595 564 Gene3D G3DSA:3.40.50.300 287 563 7.1E-85 T 13-10-2018 P40_21365 efc0c1dd05b99925f65839da6252e595 564 ProSitePatterns PS00211 ABC transporters family signature. 437 451 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_21365 efc0c1dd05b99925f65839da6252e595 564 Pfam PF00005 ABC transporter 312 465 1.3E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_21365 efc0c1dd05b99925f65839da6252e595 564 Pfam PF00005 ABC transporter 26 183 1.1E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_10355 43ffc07f23d5b2640187e605eec4f480 298 Gene3D G3DSA:3.40.50.300 122 289 2.7E-35 T 13-10-2018 P40_10355 43ffc07f23d5b2640187e605eec4f480 298 SUPERFAMILY SSF47413 15 81 2.34E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_10355 43ffc07f23d5b2640187e605eec4f480 298 Gene3D G3DSA:1.10.260.40 15 93 4.2E-16 T 13-10-2018 P40_10355 43ffc07f23d5b2640187e605eec4f480 298 Pfam PF12844 Helix-turn-helix domain 20 79 1.5E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_10355 43ffc07f23d5b2640187e605eec4f480 298 SMART SM00530 22 77 3.0E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_10355 43ffc07f23d5b2640187e605eec4f480 298 PRINTS PR01100 Shikimate kinase family signature 194 203 6.0E-8 T 13-10-2018 P40_10355 43ffc07f23d5b2640187e605eec4f480 298 PRINTS PR01100 Shikimate kinase family signature 147 160 6.0E-8 T 13-10-2018 P40_10355 43ffc07f23d5b2640187e605eec4f480 298 PRINTS PR01100 Shikimate kinase family signature 123 138 6.0E-8 T 13-10-2018 P40_10355 43ffc07f23d5b2640187e605eec4f480 298 PRINTS PR01100 Shikimate kinase family signature 175 183 6.0E-8 T 13-10-2018 P40_10355 43ffc07f23d5b2640187e605eec4f480 298 SUPERFAMILY SSF52540 123 285 4.41E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10355 43ffc07f23d5b2640187e605eec4f480 298 Pfam PF01202 Shikimate kinase 129 284 2.3E-28 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 P40_10355 43ffc07f23d5b2640187e605eec4f480 298 Hamap MF_00109 Shikimate kinase [aroK]. 120 287 18.905 T 13-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 P40_15760 cf7987d53b1abd49d41afb6ea3d4c529 303 SUPERFAMILY SSF53850 92 296 2.25E-43 T 13-10-2018 P40_15760 cf7987d53b1abd49d41afb6ea3d4c529 303 Pfam PF03466 LysR substrate binding domain 90 282 1.1E-44 T 13-10-2018 IPR005119 LysR, substrate-binding P40_15760 cf7987d53b1abd49d41afb6ea3d4c529 303 Gene3D G3DSA:3.40.190.10 93 283 4.3E-57 T 13-10-2018 P40_15760 cf7987d53b1abd49d41afb6ea3d4c529 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.0E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_15760 cf7987d53b1abd49d41afb6ea3d4c529 303 Gene3D G3DSA:3.40.190.10 164 269 4.3E-57 T 13-10-2018 P40_15760 cf7987d53b1abd49d41afb6ea3d4c529 303 SUPERFAMILY SSF46785 4 87 6.82E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_15760 cf7987d53b1abd49d41afb6ea3d4c529 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.9E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_15760 cf7987d53b1abd49d41afb6ea3d4c529 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.9E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_15760 cf7987d53b1abd49d41afb6ea3d4c529 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.9E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_15760 cf7987d53b1abd49d41afb6ea3d4c529 303 Gene3D G3DSA:1.10.10.10 1 86 2.1E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_20145 78d96c7e1e1c795df17ea0412aa9b8d9 345 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 9 331 9.1E-100 T 13-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 P40_20145 78d96c7e1e1c795df17ea0412aa9b8d9 345 SUPERFAMILY SSF53383 7 329 1.75E-54 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_20145 78d96c7e1e1c795df17ea0412aa9b8d9 345 Gene3D G3DSA:3.40.640.10 39 244 6.5E-45 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_20145 78d96c7e1e1c795df17ea0412aa9b8d9 345 Gene3D G3DSA:3.90.1150.10 27 309 6.5E-45 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_20145 78d96c7e1e1c795df17ea0412aa9b8d9 345 Pfam PF00155 Aminotransferase class I and II 59 315 6.0E-24 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_07900 d1b8bd3426b4a8c4c6e03cc55e4134c0 340 SMART SM00849 37 254 1.0E-26 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_07900 d1b8bd3426b4a8c4c6e03cc55e4134c0 340 Gene3D G3DSA:1.10.10.10 284 339 1.5E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_07900 d1b8bd3426b4a8c4c6e03cc55e4134c0 340 Pfam PF00753 Metallo-beta-lactamase superfamily 36 227 1.4E-26 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_07900 d1b8bd3426b4a8c4c6e03cc55e4134c0 340 Gene3D G3DSA:3.60.15.10 18 279 1.7E-54 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_07900 d1b8bd3426b4a8c4c6e03cc55e4134c0 340 SUPERFAMILY SSF56281 4 338 1.04E-71 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_03375 788ba05cab2ead3e22ee7b9069a7bcda 478 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 462 5.0E-107 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 P40_03375 788ba05cab2ead3e22ee7b9069a7bcda 478 Pfam PF02321 Outer membrane efflux protein 61 251 7.1E-22 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_03375 788ba05cab2ead3e22ee7b9069a7bcda 478 Pfam PF02321 Outer membrane efflux protein 283 460 2.2E-29 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_03375 788ba05cab2ead3e22ee7b9069a7bcda 478 SUPERFAMILY SSF56954 2 463 1.44E-105 T 13-10-2018 P40_03375 788ba05cab2ead3e22ee7b9069a7bcda 478 Gene3D G3DSA:1.20.1600.10 52 462 8.9E-127 T 13-10-2018 P40_03375 788ba05cab2ead3e22ee7b9069a7bcda 478 Gene3D G3DSA:2.20.200.10 98 352 8.9E-127 T 13-10-2018 P40_16005 ef9a442098bf913b2c480cf9268b0cfd 360 Gene3D G3DSA:1.10.8.410 307 359 6.0E-24 T 13-10-2018 P40_16005 ef9a442098bf913b2c480cf9268b0cfd 360 Pfam PF00700 Bacterial flagellin C-terminal helical region 275 359 6.6E-32 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 P40_16005 ef9a442098bf913b2c480cf9268b0cfd 360 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 3.3E-46 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 P40_16005 ef9a442098bf913b2c480cf9268b0cfd 360 Gene3D G3DSA:1.20.1330.10 62 305 2.2E-57 T 13-10-2018 P40_16005 ef9a442098bf913b2c480cf9268b0cfd 360 SUPERFAMILY SSF64518 1 359 4.45E-104 T 13-10-2018 P40_16005 ef9a442098bf913b2c480cf9268b0cfd 360 PRINTS PR00207 Flagellin signature 36 53 1.6E-29 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 P40_16005 ef9a442098bf913b2c480cf9268b0cfd 360 PRINTS PR00207 Flagellin signature 75 94 1.6E-29 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 P40_16005 ef9a442098bf913b2c480cf9268b0cfd 360 PRINTS PR00207 Flagellin signature 110 133 1.6E-29 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 P40_16005 ef9a442098bf913b2c480cf9268b0cfd 360 Gene3D G3DSA:3.30.70.3070 162 265 2.2E-57 T 13-10-2018 P40_16005 ef9a442098bf913b2c480cf9268b0cfd 360 Gene3D G3DSA:1.20.58.1830 1 61 7.4E-8 T 13-10-2018 P40_07180 4438ae003cfeacea0f02f58107d13133 745 SMART SM00954 263 373 1.9E-62 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 P40_07180 4438ae003cfeacea0f02f58107d13133 745 SUPERFAMILY SSF81301 219 395 1.41E-60 T 13-10-2018 P40_07180 4438ae003cfeacea0f02f58107d13133 745 Gene3D G3DSA:3.30.70.260 666 745 1.2E-17 T 13-10-2018 P40_07180 4438ae003cfeacea0f02f58107d13133 745 Pfam PF02824 TGS domain 419 478 1.1E-22 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 P40_07180 4438ae003cfeacea0f02f58107d13133 745 Pfam PF13328 HD domain 46 202 1.2E-41 T 13-10-2018 IPR003607 HD/PDEase domain P40_07180 4438ae003cfeacea0f02f58107d13133 745 Gene3D G3DSA:1.10.3210.10 14 218 1.1E-41 T 13-10-2018 P40_07180 4438ae003cfeacea0f02f58107d13133 745 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 68 742 3.2E-184 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 P40_07180 4438ae003cfeacea0f02f58107d13133 745 Pfam PF04607 Region found in RelA / SpoT proteins 263 373 2.4E-36 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 P40_07180 4438ae003cfeacea0f02f58107d13133 745 SUPERFAMILY SSF55021 665 743 1.12E-14 T 13-10-2018 P40_07180 4438ae003cfeacea0f02f58107d13133 745 Pfam PF13291 ACT domain 667 742 8.0E-20 T 13-10-2018 IPR002912 ACT domain P40_07180 4438ae003cfeacea0f02f58107d13133 745 Gene3D G3DSA:3.30.460.10 220 352 5.7E-49 T 13-10-2018 P40_07180 4438ae003cfeacea0f02f58107d13133 745 Gene3D G3DSA:3.10.20.30 413 483 1.1E-30 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_07180 4438ae003cfeacea0f02f58107d13133 745 SUPERFAMILY SSF109604 19 218 1.63E-43 T 13-10-2018 P40_07180 4438ae003cfeacea0f02f58107d13133 745 SUPERFAMILY SSF81271 411 478 2.62E-20 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 P40_05885 19b7e85e5dbe09f84e2be9314bf01e36 139 Gene3D G3DSA:1.10.260.40 19 91 5.2E-11 T 13-10-2018 P40_05885 19b7e85e5dbe09f84e2be9314bf01e36 139 Pfam PF13560 Helix-turn-helix domain 25 80 3.5E-8 T 13-10-2018 P40_05885 19b7e85e5dbe09f84e2be9314bf01e36 139 SUPERFAMILY SSF47413 23 78 7.11E-10 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_02615 55337dd5d7d032709272ea8fa9c7cbeb 336 SMART SM00382 42 249 7.7E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_02615 55337dd5d7d032709272ea8fa9c7cbeb 336 Gene3D G3DSA:3.40.50.300 11 333 1.2E-100 T 13-10-2018 P40_02615 55337dd5d7d032709272ea8fa9c7cbeb 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 307 2.6E-16 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 P40_02615 55337dd5d7d032709272ea8fa9c7cbeb 336 Pfam PF00005 ABC transporter 34 191 5.0E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_02615 55337dd5d7d032709272ea8fa9c7cbeb 336 SUPERFAMILY SSF52540 43 310 1.74E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_02615 55337dd5d7d032709272ea8fa9c7cbeb 336 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_02615 55337dd5d7d032709272ea8fa9c7cbeb 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 325 1.1E-22 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 P40_00100 1b279601a97221097d7ee74f59e5f416 202 Pfam PF13305 WHG domain 89 173 5.3E-13 T 13-10-2018 IPR025996 WHG domain P40_00100 1b279601a97221097d7ee74f59e5f416 202 SUPERFAMILY SSF46689 2 77 5.13E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_00100 1b279601a97221097d7ee74f59e5f416 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 61 4.0E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_00100 1b279601a97221097d7ee74f59e5f416 202 Gene3D G3DSA:1.10.357.10 1 194 3.6E-49 T 13-10-2018 P40_00100 1b279601a97221097d7ee74f59e5f416 202 SUPERFAMILY SSF48498 82 194 2.03E-14 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_15920 fc8def7d02dc82e8f50f9b4dfc6061c2 129 Pfam PF00072 Response regulator receiver domain 8 120 1.3E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_15920 fc8def7d02dc82e8f50f9b4dfc6061c2 129 SUPERFAMILY SSF52172 4 125 2.85E-37 T 13-10-2018 IPR011006 CheY-like superfamily P40_15920 fc8def7d02dc82e8f50f9b4dfc6061c2 129 Gene3D G3DSA:3.40.50.2300 1 127 1.6E-39 T 13-10-2018 P40_15920 fc8def7d02dc82e8f50f9b4dfc6061c2 129 SMART SM00448 6 120 2.8E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_14045 65c17dbf67cb9d0ad587e77c7bfa2d45 332 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 3 180 5.8E-39 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain P40_14045 65c17dbf67cb9d0ad587e77c7bfa2d45 332 SUPERFAMILY SSF52540 3 177 3.71E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_14045 65c17dbf67cb9d0ad587e77c7bfa2d45 332 Gene3D G3DSA:3.40.50.300 1 198 1.8E-51 T 13-10-2018 P40_14045 65c17dbf67cb9d0ad587e77c7bfa2d45 332 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 251 312 1.8E-6 T 13-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal P40_14045 65c17dbf67cb9d0ad587e77c7bfa2d45 332 SUPERFAMILY SSF90002 234 320 1.7E-9 T 13-10-2018 P40_14045 65c17dbf67cb9d0ad587e77c7bfa2d45 332 Gene3D G3DSA:3.30.1220.10 212 314 1.2E-6 T 13-10-2018 IPR036627 CobW-like, C-terminal domain superfamily P40_14045 65c17dbf67cb9d0ad587e77c7bfa2d45 332 SMART SM00833 230 324 1.1E-5 T 13-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal P40_16190 5eb47ff69c460b8e9bedc6b08f9684b0 516 Pfam PF08502 LeuA allosteric (dimerisation) domain 372 502 6.6E-38 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_16190 5eb47ff69c460b8e9bedc6b08f9684b0 516 Gene3D G3DSA:1.10.238.260 282 396 4.9E-37 T 13-10-2018 P40_16190 5eb47ff69c460b8e9bedc6b08f9684b0 516 Gene3D G3DSA:3.30.160.270 397 504 1.1E-12 T 13-10-2018 P40_16190 5eb47ff69c460b8e9bedc6b08f9684b0 516 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 6 500 6.6E-225 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_16190 5eb47ff69c460b8e9bedc6b08f9684b0 516 SUPERFAMILY SSF51569 2 293 2.72E-103 T 13-10-2018 P40_16190 5eb47ff69c460b8e9bedc6b08f9684b0 516 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 14 30 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_16190 5eb47ff69c460b8e9bedc6b08f9684b0 516 Pfam PF00682 HMGL-like 7 275 1.0E-100 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 P40_16190 5eb47ff69c460b8e9bedc6b08f9684b0 516 Gene3D G3DSA:3.20.20.70 2 279 5.7E-110 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_16190 5eb47ff69c460b8e9bedc6b08f9684b0 516 SUPERFAMILY SSF110921 394 501 5.36E-27 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_16190 5eb47ff69c460b8e9bedc6b08f9684b0 516 SMART SM00917 372 503 6.5E-43 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_16190 5eb47ff69c460b8e9bedc6b08f9684b0 516 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 4 512 44.585 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_16190 5eb47ff69c460b8e9bedc6b08f9684b0 516 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 201 214 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_02650 56ba2154adc194077897750c48db146b 281 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_02650 56ba2154adc194077897750c48db146b 281 SUPERFAMILY SSF51735 9 267 9.09E-62 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_02650 56ba2154adc194077897750c48db146b 281 Gene3D G3DSA:3.40.50.720 6 256 5.6E-63 T 13-10-2018 P40_02650 56ba2154adc194077897750c48db146b 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 7.6E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02650 56ba2154adc194077897750c48db146b 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 7.6E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02650 56ba2154adc194077897750c48db146b 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 7.6E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02650 56ba2154adc194077897750c48db146b 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 8.8E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02650 56ba2154adc194077897750c48db146b 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 8.8E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02650 56ba2154adc194077897750c48db146b 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 8.8E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02650 56ba2154adc194077897750c48db146b 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 8.8E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02650 56ba2154adc194077897750c48db146b 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 8.8E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02650 56ba2154adc194077897750c48db146b 281 Pfam PF00106 short chain dehydrogenase 12 199 4.2E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_17015 930161e82fdbc97d68ee860a722793e3 254 SMART SM00100 117 239 6.3E-12 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_17015 930161e82fdbc97d68ee860a722793e3 254 SUPERFAMILY SSF51206 141 251 1.83E-24 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like P40_17015 930161e82fdbc97d68ee860a722793e3 254 Pfam PF00027 Cyclic nucleotide-binding domain 145 226 1.8E-16 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_17015 930161e82fdbc97d68ee860a722793e3 254 Gene3D G3DSA:2.60.120.10 115 253 2.6E-25 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_18045 4886b0b6392f3e090e62c82492563ade 327 Pfam PF00561 alpha/beta hydrolase fold 27 301 1.4E-28 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_18045 4886b0b6392f3e090e62c82492563ade 327 SUPERFAMILY SSF53474 5 316 1.87E-75 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_18045 4886b0b6392f3e090e62c82492563ade 327 PRINTS PR00412 Epoxide hydrolase signature 113 126 7.0E-27 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_18045 4886b0b6392f3e090e62c82492563ade 327 PRINTS PR00412 Epoxide hydrolase signature 291 313 7.0E-27 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_18045 4886b0b6392f3e090e62c82492563ade 327 PRINTS PR00412 Epoxide hydrolase signature 53 68 7.0E-27 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_18045 4886b0b6392f3e090e62c82492563ade 327 PRINTS PR00412 Epoxide hydrolase signature 33 51 7.0E-27 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_18045 4886b0b6392f3e090e62c82492563ade 327 PRINTS PR00412 Epoxide hydrolase signature 99 112 7.0E-27 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_18045 4886b0b6392f3e090e62c82492563ade 327 Gene3D G3DSA:3.40.50.1820 3 316 5.2E-96 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_18045 4886b0b6392f3e090e62c82492563ade 327 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 1.1E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_18045 4886b0b6392f3e090e62c82492563ade 327 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 1.1E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_18045 4886b0b6392f3e090e62c82492563ade 327 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 1.1E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_08060 3e74d6742da2cf7a0c5e40ef78b9ff47 205 Gene3D G3DSA:3.40.50.300 14 204 7.6E-84 T 13-10-2018 P40_08060 3e74d6742da2cf7a0c5e40ef78b9ff47 205 Pfam PF01583 Adenylylsulphate kinase 37 191 1.6E-75 T 13-10-2018 P40_08060 3e74d6742da2cf7a0c5e40ef78b9ff47 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 19 201 7.9E-84 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 P40_08060 3e74d6742da2cf7a0c5e40ef78b9ff47 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 35 204 36.713 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 P40_08060 3e74d6742da2cf7a0c5e40ef78b9ff47 205 SUPERFAMILY SSF52540 34 201 1.82E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_19065 d514e36e080971bac567dd36d88333ab 454 Pfam PF01979 Amidohydrolase family 58 426 1.6E-62 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P40_19065 d514e36e080971bac567dd36d88333ab 454 SUPERFAMILY SSF51556 61 377 1.68E-94 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_19065 d514e36e080971bac567dd36d88333ab 454 SUPERFAMILY SSF51338 5 451 1.41E-25 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_19065 d514e36e080971bac567dd36d88333ab 454 Gene3D G3DSA:3.20.20.140 63 436 1.5E-141 T 13-10-2018 P40_19065 d514e36e080971bac567dd36d88333ab 454 Gene3D G3DSA:2.30.40.10 13 432 1.5E-141 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_05215 3ebc8f035f18333bd679bf7301933607 530 Gene3D G3DSA:3.30.9.80 315 445 2.0E-40 T 13-10-2018 P40_05215 3ebc8f035f18333bd679bf7301933607 530 Gene3D G3DSA:3.50.50.60 1 111 4.3E-30 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_05215 3ebc8f035f18333bd679bf7301933607 530 Pfam PF06100 MCRA family 7 499 5.1E-193 T 13-10-2018 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 P40_05215 3ebc8f035f18333bd679bf7301933607 530 SUPERFAMILY SSF51905 11 263 6.31E-13 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_07505 03a321098839355d334fb8636bff47f2 102 Gene3D G3DSA:1.10.260.40 1 101 1.8E-35 T 13-10-2018 P40_07505 03a321098839355d334fb8636bff47f2 102 Pfam PF01381 Helix-turn-helix 18 68 8.8E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_07505 03a321098839355d334fb8636bff47f2 102 SUPERFAMILY SSF47413 10 88 2.55E-25 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_07505 03a321098839355d334fb8636bff47f2 102 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 84 5.0E-35 T 13-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 P40_07505 03a321098839355d334fb8636bff47f2 102 SMART SM00530 14 70 4.4E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_02995 e1b6f05ab7e9704bf63c2a8d7fef856c 347 Gene3D G3DSA:3.40.50.2000 162 347 1.3E-57 T 13-10-2018 P40_02995 e1b6f05ab7e9704bf63c2a8d7fef856c 347 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 72 323 6.7E-68 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 P40_02995 e1b6f05ab7e9704bf63c2a8d7fef856c 347 Gene3D G3DSA:3.40.50.2000 5 149 2.3E-51 T 13-10-2018 P40_02995 e1b6f05ab7e9704bf63c2a8d7fef856c 347 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 6 343 7.7E-146 T 13-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 P40_02995 e1b6f05ab7e9704bf63c2a8d7fef856c 347 SUPERFAMILY SSF53756 5 342 1.36E-91 T 13-10-2018 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SUPERFAMILY SSF47226 599 715 3.4E-26 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SUPERFAMILY SSF55874 1654 1835 1.15E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1798 1816 5.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1742 1756 5.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1822 1835 5.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SUPERFAMILY SSF47226 1380 1490 1.7E-23 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Gene3D G3DSA:2.30.30.40 1838 1970 1.4E-37 T 13-10-2018 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SMART SM00260 1830 1974 7.1E-28 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Gene3D G3DSA:3.30.565.10 1651 1837 2.7E-53 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Gene3D G3DSA:3.40.50.12740 2000 2124 5.0E-39 T 13-10-2018 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Gene3D G3DSA:1.20.120.160 1214 1346 1.0E-25 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Gene3D G3DSA:1.20.120.160 591 717 2.3E-25 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SUPERFAMILY SSF47226 1221 1343 1.15E-26 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Pfam PF01627 Hpt domain 1223 1315 9.9E-15 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Pfam PF01627 Hpt domain 807 899 3.3E-11 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Pfam PF01627 Hpt domain 10 95 1.7E-6 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Pfam PF01627 Hpt domain 601 683 9.6E-13 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Pfam PF01627 Hpt domain 1383 1476 3.1E-15 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SMART SM00073 599 696 6.7E-12 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SMART SM00073 1381 1481 2.9E-7 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SMART SM00073 1221 1318 4.7E-11 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SMART SM00073 804 901 0.013 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SUPERFAMILY SSF47226 1081 1186 7.07E-10 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SMART SM00387 1697 1838 1.0E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SMART SM00448 2000 2113 3.9E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SUPERFAMILY SSF47226 9 130 6.93E-21 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Pfam PF01584 CheW-like domain 1843 1977 1.6E-23 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SUPERFAMILY SSF47226 939 1056 1.0E-10 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SUPERFAMILY SSF47226 450 556 1.41E-10 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SUPERFAMILY SSF50341 1837 1974 1.83E-24 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Gene3D G3DSA:1.20.120.160 1382 1494 2.6E-23 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Gene3D G3DSA:1.20.120.160 806 939 2.6E-14 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SUPERFAMILY SSF52172 2002 2119 2.28E-36 T 13-10-2018 IPR011006 CheY-like superfamily P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Gene3D G3DSA:2.40.50.180 1861 1929 1.4E-37 T 13-10-2018 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1513 1569 6.5E-6 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SMART SM01231 1512 1652 2.1E-10 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Pfam PF00072 Response regulator receiver domain 2002 2112 4.0E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 SUPERFAMILY SSF47226 804 927 4.06E-19 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_00325 1cc159208e9b51a0506d6b369d3b6888 2125 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1701 1837 7.7E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_13865 df8fad992c4ad38f9e6ce6c86400641c 352 SUPERFAMILY SSF53850 56 283 6.51E-5 T 13-10-2018 P40_13865 df8fad992c4ad38f9e6ce6c86400641c 352 Gene3D G3DSA:3.40.190.170 75 318 1.5E-17 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_04440 0426c66546281190eadd0ff5a0d4b308 185 Gene3D G3DSA:1.10.1740.10 2 81 2.4E-7 T 13-10-2018 P40_04440 0426c66546281190eadd0ff5a0d4b308 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 163 1.5E-17 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_04440 0426c66546281190eadd0ff5a0d4b308 185 Gene3D G3DSA:1.10.10.10 92 172 6.3E-10 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_04440 0426c66546281190eadd0ff5a0d4b308 185 Pfam PF08281 Sigma-70, region 4 111 163 3.4E-15 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_04440 0426c66546281190eadd0ff5a0d4b308 185 SUPERFAMILY SSF88946 6 75 8.63E-11 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_04440 0426c66546281190eadd0ff5a0d4b308 185 Pfam PF04542 Sigma-70 region 2 19 80 2.9E-9 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_04440 0426c66546281190eadd0ff5a0d4b308 185 SUPERFAMILY SSF88659 105 168 5.45E-12 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_18710 067b998daf94a2f779dbfeae32401632 640 Gene3D G3DSA:1.10.8.60 325 398 8.3E-29 T 13-10-2018 P40_18710 067b998daf94a2f779dbfeae32401632 640 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 2.6E-45 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_18710 067b998daf94a2f779dbfeae32401632 640 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 609 37.83 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 P40_18710 067b998daf94a2f779dbfeae32401632 640 SUPERFAMILY SSF140990 404 606 8.5E-79 T 13-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 P40_18710 067b998daf94a2f779dbfeae32401632 640 Gene3D G3DSA:3.40.50.300 138 324 7.8E-71 T 13-10-2018 P40_18710 067b998daf94a2f779dbfeae32401632 640 Pfam PF06480 FtsH Extracellular 5 91 4.5E-9 T 13-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 P40_18710 067b998daf94a2f779dbfeae32401632 640 Gene3D G3DSA:1.20.58.760 399 601 5.9E-77 T 13-10-2018 P40_18710 067b998daf94a2f779dbfeae32401632 640 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 13-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 P40_18710 067b998daf94a2f779dbfeae32401632 640 SUPERFAMILY SSF52540 146 393 1.86E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18710 067b998daf94a2f779dbfeae32401632 640 Pfam PF01434 Peptidase family M41 383 594 6.5E-85 T 13-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 P40_18710 067b998daf94a2f779dbfeae32401632 640 SMART SM00382 186 325 6.6E-24 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_18710 067b998daf94a2f779dbfeae32401632 640 Gene3D G3DSA:2.40.50.920 23 99 4.5E-12 T 13-10-2018 P40_18710 067b998daf94a2f779dbfeae32401632 640 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 595 5.3E-242 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 P40_04925 efd86253d084e6bc23286c8ad0b17aab 471 Gene3D G3DSA:3.40.50.12780 4 353 1.5E-69 T 13-10-2018 P40_04925 efd86253d084e6bc23286c8ad0b17aab 471 Pfam PF00501 AMP-binding enzyme 10 101 5.3E-12 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_04925 efd86253d084e6bc23286c8ad0b17aab 471 Pfam PF00501 AMP-binding enzyme 120 360 5.8E-38 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_04925 efd86253d084e6bc23286c8ad0b17aab 471 ProSitePatterns PS00455 Putative AMP-binding domain signature. 125 136 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_04925 efd86253d084e6bc23286c8ad0b17aab 471 SUPERFAMILY SSF56801 3 461 3.27E-87 T 13-10-2018 P40_14980 985784cd22768f53b5f421accfce81f5 422 Pfam PF13194 Domain of unknown function (DUF4010) 187 396 8.9E-69 T 13-10-2018 IPR025105 Domain of unknown function DUF4010 P40_14980 985784cd22768f53b5f421accfce81f5 422 Pfam PF02308 MgtC family 14 139 7.1E-18 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 P40_15020 2a7837dd5d2b77467866c2f7fca12b7c 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 1.6E-105 T 13-10-2018 IPR002220 DapA-like GO:0016829 P40_15020 2a7837dd5d2b77467866c2f7fca12b7c 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 286 4.3E-111 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_15020 2a7837dd5d2b77467866c2f7fca12b7c 293 SMART SM01130 1 289 9.6E-151 T 13-10-2018 IPR002220 DapA-like GO:0016829 P40_15020 2a7837dd5d2b77467866c2f7fca12b7c 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.3E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 P40_15020 2a7837dd5d2b77467866c2f7fca12b7c 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.3E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 P40_15020 2a7837dd5d2b77467866c2f7fca12b7c 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.3E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 P40_15020 2a7837dd5d2b77467866c2f7fca12b7c 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.3E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 P40_15020 2a7837dd5d2b77467866c2f7fca12b7c 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 68.062 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_15020 2a7837dd5d2b77467866c2f7fca12b7c 293 SUPERFAMILY SSF51569 1 291 2.09E-105 T 13-10-2018 P40_15020 2a7837dd5d2b77467866c2f7fca12b7c 293 PIRSF PIRSF001365 1 293 5.4E-99 T 13-10-2018 IPR002220 DapA-like GO:0016829 P40_15020 2a7837dd5d2b77467866c2f7fca12b7c 293 Gene3D G3DSA:3.20.20.70 2 292 4.1E-117 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_15020 2a7837dd5d2b77467866c2f7fca12b7c 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 13-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_15020 2a7837dd5d2b77467866c2f7fca12b7c 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 13-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 P40_08405 bc1b4f519c58592b680fb5f72096594c 307 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 170 290 1.0E-26 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 P40_08405 bc1b4f519c58592b680fb5f72096594c 307 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 9 295 1.0E-52 T 13-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 P40_08405 bc1b4f519c58592b680fb5f72096594c 307 SMART SM00771 167 295 1.0E-43 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 P40_08405 bc1b4f519c58592b680fb5f72096594c 307 Gene3D G3DSA:3.30.1400.10 165 303 1.1E-48 T 13-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 P40_08405 bc1b4f519c58592b680fb5f72096594c 307 SUPERFAMILY SSF64383 167 301 9.02E-42 T 13-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 P40_08405 bc1b4f519c58592b680fb5f72096594c 307 Hamap MF_00509 Cell division protein ZipA [zipA]. 1 297 19.263 T 13-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 P40_08405 bc1b4f519c58592b680fb5f72096594c 307 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 169 294 6.9E-44 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 P40_00510 cb25ab6c9d29548d190415d32269ef79 665 Pfam PF08487 Vault protein inter-alpha-trypsin domain 65 174 3.4E-34 T 13-10-2018 IPR013694 VIT domain P40_00510 cb25ab6c9d29548d190415d32269ef79 665 SMART SM00327 311 477 6.0E-14 T 13-10-2018 IPR002035 von Willebrand factor, type A P40_00510 cb25ab6c9d29548d190415d32269ef79 665 TIGRFAM TIGR03788 marine_srt_targ: marine proteobacterial sortase target protein 65 660 2.5E-201 T 13-10-2018 IPR022440 Conserved hypothetical protein CHP03788 P40_00510 cb25ab6c9d29548d190415d32269ef79 665 SUPERFAMILY SSF53300 311 479 2.78E-27 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily P40_00510 cb25ab6c9d29548d190415d32269ef79 665 SMART SM00609 53 176 4.5E-9 T 13-10-2018 IPR013694 VIT domain P40_00510 cb25ab6c9d29548d190415d32269ef79 665 Pfam PF13768 von Willebrand factor type A domain 315 463 6.6E-21 T 13-10-2018 IPR002035 von Willebrand factor, type A P40_00510 cb25ab6c9d29548d190415d32269ef79 665 Gene3D G3DSA:3.40.50.410 312 482 2.5E-32 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily P40_02320 a81c4c10c954b783239828ed41ea939e 522 Pfam PF04262 Glutamate-cysteine ligase 10 382 1.8E-168 T 13-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 P40_02320 a81c4c10c954b783239828ed41ea939e 522 Gene3D G3DSA:3.30.590.20 19 522 4.5E-200 T 13-10-2018 P40_02320 a81c4c10c954b783239828ed41ea939e 522 SUPERFAMILY SSF55931 6 516 3.14E-193 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 P40_02320 a81c4c10c954b783239828ed41ea939e 522 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 11 518 9.5E-190 T 13-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 P40_02320 a81c4c10c954b783239828ed41ea939e 522 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 522 209.035 T 13-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 P40_09715 c75712088d2890b481697cac3a6fa3ed 559 Pfam PF02554 Carbon starvation protein CstA 1 348 1.5E-115 T 13-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 P40_09715 c75712088d2890b481697cac3a6fa3ed 559 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 388 508 3.8E-31 T 13-10-2018 IPR025299 CstA, C-terminal domain P40_02390 244b14bc7a10ac260b22c72f980a567b 132 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 14 109 2.4E-12 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 P40_02390 244b14bc7a10ac260b22c72f980a567b 132 Gene3D G3DSA:3.10.129.10 1 129 9.4E-29 T 13-10-2018 P40_02390 244b14bc7a10ac260b22c72f980a567b 132 SUPERFAMILY SSF54637 8 128 7.23E-23 T 13-10-2018 IPR029069 HotDog domain superfamily P40_02390 244b14bc7a10ac260b22c72f980a567b 132 Pfam PF03061 Thioesterase superfamily 45 110 1.1E-8 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_13000 36dbb05693159234ed1ad930031ba374 949 Pfam PF13086 AAA domain 169 460 1.1E-17 T 13-10-2018 P40_13000 36dbb05693159234ed1ad930031ba374 949 Gene3D G3DSA:3.40.50.300 514 710 5.1E-21 T 13-10-2018 P40_13000 36dbb05693159234ed1ad930031ba374 949 SUPERFAMILY SSF52540 164 676 5.14E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_13000 36dbb05693159234ed1ad930031ba374 949 Pfam PF13087 AAA domain 491 675 2.6E-14 T 13-10-2018 P40_13260 782cdef0a981f9f2ff7df8891b8028f2 254 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 249 41.394 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 P40_13260 782cdef0a981f9f2ff7df8891b8028f2 254 SUPERFAMILY SSF53448 1 249 2.35E-55 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_13260 782cdef0a981f9f2ff7df8891b8028f2 254 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 242 4.1E-86 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 P40_13260 782cdef0a981f9f2ff7df8891b8028f2 254 Pfam PF02348 Cytidylyltransferase 5 220 1.4E-53 T 13-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 P40_13260 782cdef0a981f9f2ff7df8891b8028f2 254 Gene3D G3DSA:3.90.550.10 1 250 8.4E-89 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_21440 99b73128e115da5272e9f194789c2479 143 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 13-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site P40_21440 99b73128e115da5272e9f194789c2479 143 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 141 6.5E-43 T 13-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L P40_21440 99b73128e115da5272e9f194789c2479 143 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 142 5.4E-42 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 P40_21440 99b73128e115da5272e9f194789c2479 143 Gene3D G3DSA:1.10.1200.120 3 143 6.7E-42 T 13-10-2018 IPR036019 Gated mechanosensitive channel P40_21440 99b73128e115da5272e9f194789c2479 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 92 100 1.9E-10 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 P40_21440 99b73128e115da5272e9f194789c2479 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.9E-10 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 P40_21440 99b73128e115da5272e9f194789c2479 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 101 110 1.9E-10 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 P40_21440 99b73128e115da5272e9f194789c2479 143 SUPERFAMILY SSF81330 12 137 7.59E-36 T 13-10-2018 IPR036019 Gated mechanosensitive channel P40_21440 99b73128e115da5272e9f194789c2479 143 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 142 24.099 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 P40_19090 35830b4dc5b79fdb4d21936084519b76 267 Gene3D G3DSA:3.40.50.300 13 249 5.5E-67 T 13-10-2018 P40_19090 35830b4dc5b79fdb4d21936084519b76 267 SUPERFAMILY SSF52540 14 244 4.48E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_19090 35830b4dc5b79fdb4d21936084519b76 267 SMART SM00382 43 237 4.0E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_19090 35830b4dc5b79fdb4d21936084519b76 267 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_19090 35830b4dc5b79fdb4d21936084519b76 267 Pfam PF00005 ABC transporter 34 174 1.7E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_01255 1b030081a8053c703322b1a29d308f46 462 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 454 44.735 T 13-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 P40_01255 1b030081a8053c703322b1a29d308f46 462 Gene3D G3DSA:3.40.50.1480 371 462 2.1E-31 T 13-10-2018 P40_01255 1b030081a8053c703322b1a29d308f46 462 SUPERFAMILY SSF51735 198 374 1.1E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_01255 1b030081a8053c703322b1a29d308f46 462 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 220 236 - T 13-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 P40_01255 1b030081a8053c703322b1a29d308f46 462 Gene3D G3DSA:3.40.50.1480 8 204 7.1E-95 T 13-10-2018 P40_01255 1b030081a8053c703322b1a29d308f46 462 SUPERFAMILY SSF52283 8 462 1.64E-111 T 13-10-2018 P40_01255 1b030081a8053c703322b1a29d308f46 462 SMART SM00997 198 374 2.2E-83 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 P40_01255 1b030081a8053c703322b1a29d308f46 462 SMART SM00996 10 461 3.0E-281 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 P40_01255 1b030081a8053c703322b1a29d308f46 462 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 454 1.5E-158 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 P40_01255 1b030081a8053c703322b1a29d308f46 462 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 148 4.7E-74 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 P40_01255 1b030081a8053c703322b1a29d308f46 462 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 149 461 2.2E-54 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 P40_01255 1b030081a8053c703322b1a29d308f46 462 Gene3D G3DSA:3.40.50.720 205 370 1.8E-70 T 13-10-2018 P40_01255 1b030081a8053c703322b1a29d308f46 462 PIRSF PIRSF001109 1 462 8.4E-185 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 P40_01255 1b030081a8053c703322b1a29d308f46 462 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 13-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 P40_01255 1b030081a8053c703322b1a29d308f46 462 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 198 374 3.4E-58 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 P40_03285 9742dc1cb9aaa2c11b70792aa146a97d 513 Gene3D G3DSA:2.40.50.840 422 497 4.1E-5 T 13-10-2018 P40_03285 9742dc1cb9aaa2c11b70792aa146a97d 513 SUPERFAMILY SSF53901 31 372 1.71E-9 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_03355 2b39f2c071dc69e9c5e4db37590ed978 364 Gene3D G3DSA:3.20.20.70 1 353 2.2E-122 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_03355 2b39f2c071dc69e9c5e4db37590ed978 364 SUPERFAMILY SSF51395 1 351 7.05E-114 T 13-10-2018 P40_03355 2b39f2c071dc69e9c5e4db37590ed978 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 336 6.6E-68 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 P40_17550 9284959f31037d6c6c568cccc17ccc87 84 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 6.9E-36 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 P40_17550 9284959f31037d6c6c568cccc17ccc87 84 Gene3D G3DSA:3.30.2310.20 1 84 2.9E-41 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily P40_17550 9284959f31037d6c6c568cccc17ccc87 84 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 2.8E-39 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 P40_17550 9284959f31037d6c6c568cccc17ccc87 84 SUPERFAMILY SSF143011 1 83 4.84E-30 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily P40_19035 bbb0680ce30e3b26c1060cd8a8004fac 301 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 6 300 5.1E-155 T 13-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 P40_19035 bbb0680ce30e3b26c1060cd8a8004fac 301 Gene3D G3DSA:3.20.20.370 1 301 5.2E-106 T 13-10-2018 P40_19035 bbb0680ce30e3b26c1060cd8a8004fac 301 Pfam PF01522 Polysaccharide deacetylase 77 177 1.4E-16 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 P40_19035 bbb0680ce30e3b26c1060cd8a8004fac 301 SUPERFAMILY SSF88713 6 300 7.79E-97 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 P40_20700 d5e1e38dfeef02c916d386de53d24452 426 Pfam PF00743 Flavin-binding monooxygenase-like 3 369 3.5E-57 T 13-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 P40_20700 d5e1e38dfeef02c916d386de53d24452 426 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 128 144 3.3E-18 T 13-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 P40_20700 d5e1e38dfeef02c916d386de53d24452 426 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 182 197 3.3E-18 T 13-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 P40_20700 d5e1e38dfeef02c916d386de53d24452 426 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 97 109 3.3E-18 T 13-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 P40_20700 d5e1e38dfeef02c916d386de53d24452 426 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 24 48 3.3E-18 T 13-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 P40_20700 d5e1e38dfeef02c916d386de53d24452 426 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 292 319 3.3E-18 T 13-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 P40_20700 d5e1e38dfeef02c916d386de53d24452 426 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 112 128 3.3E-18 T 13-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 P40_20700 d5e1e38dfeef02c916d386de53d24452 426 SUPERFAMILY SSF51735 166 321 1.02E-7 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_20700 d5e1e38dfeef02c916d386de53d24452 426 Gene3D G3DSA:3.50.50.60 1 379 6.7E-73 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_20700 d5e1e38dfeef02c916d386de53d24452 426 PIRSF PIRSF000332 1 390 4.6E-65 T 13-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 P40_20700 d5e1e38dfeef02c916d386de53d24452 426 SUPERFAMILY SSF51905 3 202 2.59E-47 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_10380 aca96f611ee2f2e1f7c932a6104d7c97 380 SUPERFAMILY SSF53822 20 370 1.56E-91 T 13-10-2018 IPR028082 Periplasmic binding protein-like I P40_10380 aca96f611ee2f2e1f7c932a6104d7c97 380 Pfam PF13458 Periplasmic binding protein 20 359 2.8E-75 T 13-10-2018 IPR028081 Leucine-binding protein domain P40_10380 aca96f611ee2f2e1f7c932a6104d7c97 380 Gene3D G3DSA:3.40.50.2300 138 355 3.9E-110 T 13-10-2018 P40_10380 aca96f611ee2f2e1f7c932a6104d7c97 380 Gene3D G3DSA:3.40.50.2300 22 349 3.9E-110 T 13-10-2018 P40_18415 54edcc8a5ec7f3f0727444cb231aa0a0 170 SMART SM00014 53 164 1.2E-16 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase P40_18415 54edcc8a5ec7f3f0727444cb231aa0a0 170 Pfam PF01569 PAP2 superfamily 58 166 8.3E-21 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase P40_18415 54edcc8a5ec7f3f0727444cb231aa0a0 170 SUPERFAMILY SSF48317 2 167 5.23E-36 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily P40_18415 54edcc8a5ec7f3f0727444cb231aa0a0 170 Gene3D G3DSA:1.20.144.10 83 170 2.9E-20 T 13-10-2018 P40_07925 6709276706daa4455f29491640885a6d 280 Gene3D G3DSA:3.10.129.10 15 280 5.2E-80 T 13-10-2018 P40_07925 6709276706daa4455f29491640885a6d 280 Pfam PF01575 MaoC like domain 161 263 4.1E-25 T 13-10-2018 IPR002539 MaoC-like dehydratase domain P40_07925 6709276706daa4455f29491640885a6d 280 SUPERFAMILY SSF54637 9 156 1.07E-40 T 13-10-2018 IPR029069 HotDog domain superfamily P40_07925 6709276706daa4455f29491640885a6d 280 Pfam PF13452 N-terminal half of MaoC dehydratase 14 135 1.6E-10 T 13-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 P40_07925 6709276706daa4455f29491640885a6d 280 SUPERFAMILY SSF54637 160 276 1.61E-27 T 13-10-2018 IPR029069 HotDog domain superfamily P40_08765 b4064e3cc82cb76dff3663bd13874c7c 483 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 314 330 2.6E-15 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08765 b4064e3cc82cb76dff3663bd13874c7c 483 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 287 305 2.6E-15 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08765 b4064e3cc82cb76dff3663bd13874c7c 483 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 370 387 2.6E-15 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08765 b4064e3cc82cb76dff3663bd13874c7c 483 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 251 264 2.6E-15 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08765 b4064e3cc82cb76dff3663bd13874c7c 483 Gene3D G3DSA:3.40.50.720 134 468 2.1E-113 T 13-10-2018 P40_08765 b4064e3cc82cb76dff3663bd13874c7c 483 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 291 298 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08765 b4064e3cc82cb76dff3663bd13874c7c 483 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 133 243 2.2E-21 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08765 b4064e3cc82cb76dff3663bd13874c7c 483 Gene3D G3DSA:3.30.360.10 292 457 2.1E-113 T 13-10-2018 P40_08765 b4064e3cc82cb76dff3663bd13874c7c 483 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 298 455 6.1E-45 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08765 b4064e3cc82cb76dff3663bd13874c7c 483 SUPERFAMILY SSF51735 133 309 1.5E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_08765 b4064e3cc82cb76dff3663bd13874c7c 483 SMART SM00846 132 293 3.6E-51 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08765 b4064e3cc82cb76dff3663bd13874c7c 483 SUPERFAMILY SSF55347 293 456 1.58E-53 T 13-10-2018 P40_02245 215939918838d6a342d0465a763cbb02 384 Gene3D G3DSA:1.10.540.10 1 120 2.4E-34 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_02245 215939918838d6a342d0465a763cbb02 384 PIRSF PIRSF016578 4 379 1.0E-14 T 13-10-2018 P40_02245 215939918838d6a342d0465a763cbb02 384 SUPERFAMILY SSF47203 229 378 3.7E-44 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_02245 215939918838d6a342d0465a763cbb02 384 Gene3D G3DSA:1.20.140.10 233 383 2.0E-40 T 13-10-2018 P40_02245 215939918838d6a342d0465a763cbb02 384 SUPERFAMILY SSF56645 2 241 9.56E-77 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_02245 215939918838d6a342d0465a763cbb02 384 Gene3D G3DSA:2.40.110.10 121 232 4.3E-42 T 13-10-2018 P40_02245 215939918838d6a342d0465a763cbb02 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 3.7E-45 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_02245 215939918838d6a342d0465a763cbb02 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_02245 215939918838d6a342d0465a763cbb02 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 3.7E-24 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_02245 215939918838d6a342d0465a763cbb02 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 2.9E-27 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_02245 215939918838d6a342d0465a763cbb02 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_06570 d62bc91c9e62e9dd871da9ac644c1161 84 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.784 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_06570 d62bc91c9e62e9dd871da9ac644c1161 84 Gene3D G3DSA:3.30.1320.10 1 84 1.1E-28 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_06570 d62bc91c9e62e9dd871da9ac644c1161 84 Pfam PF00886 Ribosomal protein S16 8 68 1.6E-22 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_06570 d62bc91c9e62e9dd871da9ac644c1161 84 TIGRFAM TIGR00002 S16: ribosomal protein bS16 4 79 2.4E-28 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_06570 d62bc91c9e62e9dd871da9ac644c1161 84 SUPERFAMILY SSF54565 1 76 6.28E-27 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03475 7ae19dbbb45b6424190ffd31cd5a8b9c 246 Gene3D G3DSA:1.20.120.530 77 216 8.5E-23 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_03475 7ae19dbbb45b6424190ffd31cd5a8b9c 246 SUPERFAMILY SSF46785 5 99 4.61E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_03475 7ae19dbbb45b6424190ffd31cd5a8b9c 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.4E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_03475 7ae19dbbb45b6424190ffd31cd5a8b9c 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.4E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_03475 7ae19dbbb45b6424190ffd31cd5a8b9c 246 Gene3D G3DSA:1.10.10.10 8 74 2.8E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_03475 7ae19dbbb45b6424190ffd31cd5a8b9c 246 SUPERFAMILY SSF48008 81 214 1.49E-23 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_03475 7ae19dbbb45b6424190ffd31cd5a8b9c 246 SMART SM00345 15 73 1.8E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_03475 7ae19dbbb45b6424190ffd31cd5a8b9c 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.6E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_03475 7ae19dbbb45b6424190ffd31cd5a8b9c 246 SMART SM00895 83 207 6.7E-12 T 13-10-2018 IPR011711 GntR, C-terminal P40_03475 7ae19dbbb45b6424190ffd31cd5a8b9c 246 Pfam PF07729 FCD domain 83 206 5.6E-16 T 13-10-2018 IPR011711 GntR, C-terminal P40_09415 cf09dc4620d36a4eb217432a09fcb68d 155 Pfam PF00293 NUDIX domain 10 124 8.2E-15 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 P40_09415 cf09dc4620d36a4eb217432a09fcb68d 155 Gene3D G3DSA:3.90.79.10 1 149 5.1E-38 T 13-10-2018 P40_09415 cf09dc4620d36a4eb217432a09fcb68d 155 SUPERFAMILY SSF55811 4 139 1.08E-25 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 P40_09635 2046f2e457b68bb6779bdf0d22a269e4 398 Gene3D G3DSA:3.40.50.10540 9 391 1.1E-115 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_09635 2046f2e457b68bb6779bdf0d22a269e4 398 Gene3D G3DSA:3.30.1540.10 235 328 1.1E-115 T 13-10-2018 P40_09635 2046f2e457b68bb6779bdf0d22a269e4 398 Pfam PF02515 CoA-transferase family III 10 374 2.5E-107 T 13-10-2018 IPR003673 CoA-transferase family III GO:0003824 P40_09635 2046f2e457b68bb6779bdf0d22a269e4 398 SUPERFAMILY SSF89796 6 398 3.79E-122 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 SUPERFAMILY SSF53738 2 178 1.33E-47 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 Gene3D G3DSA:3.40.120.10 255 337 2.1E-62 T 13-10-2018 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 SUPERFAMILY SSF53738 155 255 5.89E-28 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 Gene3D G3DSA:3.40.120.10 172 359 2.1E-62 T 13-10-2018 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 SUPERFAMILY SSF53738 256 362 8.24E-30 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 133 2.7E-44 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 442 47.11 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 363 3.5E-31 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 371 439 5.1E-15 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 172 191 2.2E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.2E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 2.2E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 Gene3D G3DSA:3.40.120.10 2 153 3.4E-49 T 13-10-2018 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 Gene3D G3DSA:3.30.310.50 368 444 2.6E-25 T 13-10-2018 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 440 8.9E-187 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 252 5.4E-18 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_18700 53ec46c3a24f76f2d227469a75b9cb02 444 SUPERFAMILY SSF55957 357 443 1.57E-21 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_15505 5522750f60db257c8b3ce4c6af1f67ad 569 SUPERFAMILY SSF53850 94 538 1.3E-94 T 13-10-2018 P40_15505 5522750f60db257c8b3ce4c6af1f67ad 569 Gene3D G3DSA:3.10.105.10 311 524 2.9E-53 T 13-10-2018 P40_15505 5522750f60db257c8b3ce4c6af1f67ad 569 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 96 457 2.3E-67 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain P40_15505 5522750f60db257c8b3ce4c6af1f67ad 569 Gene3D G3DSA:3.40.190.10 16 310 1.0E-39 T 13-10-2018 P40_03580 4d8226e48e6f8daad505fe0db092f528 272 Gene3D G3DSA:3.40.250.10 1 140 9.9E-39 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_03580 4d8226e48e6f8daad505fe0db092f528 272 SMART SM00450 146 266 1.7E-19 T 13-10-2018 IPR001763 Rhodanese-like domain P40_03580 4d8226e48e6f8daad505fe0db092f528 272 SMART SM00450 7 122 1.9E-19 T 13-10-2018 IPR001763 Rhodanese-like domain P40_03580 4d8226e48e6f8daad505fe0db092f528 272 Pfam PF00581 Rhodanese-like domain 152 262 7.8E-15 T 13-10-2018 IPR001763 Rhodanese-like domain P40_03580 4d8226e48e6f8daad505fe0db092f528 272 Pfam PF00581 Rhodanese-like domain 9 118 3.7E-17 T 13-10-2018 IPR001763 Rhodanese-like domain P40_03580 4d8226e48e6f8daad505fe0db092f528 272 Gene3D G3DSA:3.40.250.10 144 270 1.2E-31 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_03580 4d8226e48e6f8daad505fe0db092f528 272 SUPERFAMILY SSF52821 144 270 1.11E-29 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_03580 4d8226e48e6f8daad505fe0db092f528 272 SUPERFAMILY SSF52821 2 139 2.62E-35 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_03580 4d8226e48e6f8daad505fe0db092f528 272 ProSitePatterns PS00380 Rhodanese signature 1. 32 43 - T 13-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 P40_08475 0a48eb71cb404d97b6bb7d5d04de1011 243 SUPERFAMILY SSF53335 20 242 1.53E-36 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_08475 0a48eb71cb404d97b6bb7d5d04de1011 243 PIRSF PIRSF006325 2 243 1.2E-86 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 P40_08475 0a48eb71cb404d97b6bb7d5d04de1011 243 Pfam PF13649 Methyltransferase domain 63 159 1.1E-12 T 13-10-2018 P40_08475 0a48eb71cb404d97b6bb7d5d04de1011 243 Gene3D G3DSA:3.40.50.150 19 243 4.9E-56 T 13-10-2018 P40_08475 0a48eb71cb404d97b6bb7d5d04de1011 243 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 5 242 2.2E-76 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 P40_08475 0a48eb71cb404d97b6bb7d5d04de1011 243 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 4 243 39.026 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 P40_01630 003e738120c13a64258f26a6051ddd97 289 SUPERFAMILY SSF47616 117 259 4.04E-33 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_01630 003e738120c13a64258f26a6051ddd97 289 Gene3D G3DSA:1.20.1050.10 133 249 7.4E-112 T 13-10-2018 P40_01630 003e738120c13a64258f26a6051ddd97 289 Gene3D G3DSA:3.40.30.10 18 255 7.4E-112 T 13-10-2018 P40_01630 003e738120c13a64258f26a6051ddd97 289 Pfam PF13410 Glutathione S-transferase, C-terminal domain 179 242 1.8E-9 T 13-10-2018 P40_01630 003e738120c13a64258f26a6051ddd97 289 Pfam PF02798 Glutathione S-transferase, N-terminal domain 65 127 4.3E-5 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_01630 003e738120c13a64258f26a6051ddd97 289 SUPERFAMILY SSF52833 38 131 7.8E-16 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_13250 90121fc8fc2cf30afc26599b84a73cdd 344 SUPERFAMILY SSF56176 7 189 6.91E-37 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 P40_13250 90121fc8fc2cf30afc26599b84a73cdd 344 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 344 73.686 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_13250 90121fc8fc2cf30afc26599b84a73cdd 344 Gene3D G3DSA:3.90.78.10 228 340 1.5E-41 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_13250 90121fc8fc2cf30afc26599b84a73cdd 344 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 12 333 1.1E-61 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_13250 90121fc8fc2cf30afc26599b84a73cdd 344 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 215 336 1.3E-34 T 13-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_13250 90121fc8fc2cf30afc26599b84a73cdd 344 Pfam PF01565 FAD binding domain 22 147 7.8E-17 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 P40_13250 90121fc8fc2cf30afc26599b84a73cdd 344 Gene3D G3DSA:3.30.465.10 72 227 4.6E-46 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 P40_13250 90121fc8fc2cf30afc26599b84a73cdd 344 SUPERFAMILY SSF56194 211 337 3.92E-45 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P40_13250 90121fc8fc2cf30afc26599b84a73cdd 344 Gene3D G3DSA:3.30.43.10 1 66 1.9E-12 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 P40_09340 d6517099e80fd2b987e69cb370d1d496 724 Gene3D G3DSA:3.20.20.360 10 581 1.8E-280 T 13-10-2018 P40_09340 d6517099e80fd2b987e69cb370d1d496 724 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 721 0.0 T 13-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 P40_09340 d6517099e80fd2b987e69cb370d1d496 724 Gene3D G3DSA:2.170.170.11 135 263 1.8E-280 T 13-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 P40_09340 d6517099e80fd2b987e69cb370d1d496 724 Gene3D G3DSA:1.20.1220.12 583 724 6.6E-74 T 13-10-2018 P40_09340 d6517099e80fd2b987e69cb370d1d496 724 Pfam PF01274 Malate synthase 19 695 2.4E-175 T 13-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 P40_09340 d6517099e80fd2b987e69cb370d1d496 724 SUPERFAMILY SSF51645 2 721 0.0 T 13-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 P40_09340 d6517099e80fd2b987e69cb370d1d496 724 Hamap MF_00641 Malate synthase G [glcB]. 1 724 403.544 T 13-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 P40_01105 992c4d981deb48f05db459b3a7182fce 198 Pfam PF07021 Methionine biosynthesis protein MetW 4 196 7.9E-81 T 13-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 P40_01105 992c4d981deb48f05db459b3a7182fce 198 Gene3D G3DSA:3.40.50.150 8 187 4.1E-25 T 13-10-2018 P40_01105 992c4d981deb48f05db459b3a7182fce 198 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 4 196 1.1E-82 T 13-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 P40_01105 992c4d981deb48f05db459b3a7182fce 198 SUPERFAMILY SSF53335 7 192 1.09E-31 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_02070 177d8059b7a3073f461ec1197d6d9bd2 166 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 156 42.682 T 13-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 P40_02070 177d8059b7a3073f461ec1197d6d9bd2 166 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 155 4.6E-35 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 P40_02070 177d8059b7a3073f461ec1197d6d9bd2 166 Gene3D G3DSA:3.30.160.70 1 71 1.5E-19 T 13-10-2018 P40_02070 177d8059b7a3073f461ec1197d6d9bd2 166 SUPERFAMILY SSF46767 75 156 6.15E-31 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 P40_02070 177d8059b7a3073f461ec1197d6d9bd2 166 SUPERFAMILY SSF53155 4 81 7.85E-18 T 13-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 P40_02070 177d8059b7a3073f461ec1197d6d9bd2 166 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 126 132 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 P40_02070 177d8059b7a3073f461ec1197d6d9bd2 166 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 156 3.2E-32 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 P40_02070 177d8059b7a3073f461ec1197d6d9bd2 166 Gene3D G3DSA:1.10.10.10 75 158 3.3E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_13080 44a6810b9814422f3b40f0637f5b0422 288 SUPERFAMILY SSF46785 5 114 5.34E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_13080 44a6810b9814422f3b40f0637f5b0422 288 Gene3D G3DSA:3.40.190.10 98 266 5.9E-53 T 13-10-2018 P40_13080 44a6810b9814422f3b40f0637f5b0422 288 SUPERFAMILY SSF53850 92 287 4.56E-28 T 13-10-2018 P40_13080 44a6810b9814422f3b40f0637f5b0422 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 8.3E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_13080 44a6810b9814422f3b40f0637f5b0422 288 Gene3D G3DSA:1.10.10.10 2 87 6.1E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_13080 44a6810b9814422f3b40f0637f5b0422 288 Gene3D G3DSA:3.40.190.10 167 260 5.9E-53 T 13-10-2018 P40_13080 44a6810b9814422f3b40f0637f5b0422 288 Pfam PF03466 LysR substrate binding domain 92 284 8.1E-25 T 13-10-2018 IPR005119 LysR, substrate-binding P40_21485 f03370416770bb803ebd5806de237ef8 290 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 275 2.8E-45 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_13965 31c51380483a63bb0e0cb3e02102b7ad 106 SUPERFAMILY SSF82607 5 96 3.01E-30 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily P40_13965 31c51380483a63bb0e0cb3e02102b7ad 106 Pfam PF02575 YbaB/EbfC DNA-binding family 9 97 1.9E-30 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family P40_13965 31c51380483a63bb0e0cb3e02102b7ad 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 96 21.723 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family P40_13965 31c51380483a63bb0e0cb3e02102b7ad 106 Gene3D G3DSA:3.30.1310.10 1 104 1.8E-36 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily P40_13965 31c51380483a63bb0e0cb3e02102b7ad 106 PIRSF PIRSF004555 1 106 8.7E-34 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family P40_13965 31c51380483a63bb0e0cb3e02102b7ad 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 4 93 6.0E-30 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family P40_19295 d9eaa7a36e63365ed92d4ebe6ce7d476 473 SUPERFAMILY SSF51971 148 402 1.53E-69 T 13-10-2018 P40_19295 d9eaa7a36e63365ed92d4ebe6ce7d476 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 460 6.9E-24 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_19295 d9eaa7a36e63365ed92d4ebe6ce7d476 473 Gene3D G3DSA:3.50.50.60 253 401 1.1E-45 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_19295 d9eaa7a36e63365ed92d4ebe6ce7d476 473 SUPERFAMILY SSF46548 9 160 9.94E-41 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P40_19295 d9eaa7a36e63365ed92d4ebe6ce7d476 473 Gene3D G3DSA:1.10.1060.10 13 149 2.2E-33 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P40_19295 d9eaa7a36e63365ed92d4ebe6ce7d476 473 PRINTS PR00419 Adrenodoxin reductase family signature 151 173 1.5E-35 T 13-10-2018 P40_19295 d9eaa7a36e63365ed92d4ebe6ce7d476 473 PRINTS PR00419 Adrenodoxin reductase family signature 174 187 1.5E-35 T 13-10-2018 P40_19295 d9eaa7a36e63365ed92d4ebe6ce7d476 473 PRINTS PR00419 Adrenodoxin reductase family signature 216 226 1.5E-35 T 13-10-2018 P40_19295 d9eaa7a36e63365ed92d4ebe6ce7d476 473 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 1.5E-35 T 13-10-2018 P40_19295 d9eaa7a36e63365ed92d4ebe6ce7d476 473 PRINTS PR00419 Adrenodoxin reductase family signature 326 339 1.5E-35 T 13-10-2018 P40_19295 d9eaa7a36e63365ed92d4ebe6ce7d476 473 Gene3D G3DSA:3.40.50.720 150 251 3.1E-13 T 13-10-2018 P40_19295 d9eaa7a36e63365ed92d4ebe6ce7d476 473 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 9 473 2.9E-242 T 13-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 P40_19295 d9eaa7a36e63365ed92d4ebe6ce7d476 473 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 27 137 8.3E-38 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 P40_06675 fcf0e8e1a153b16898397f055a37a510 531 Gene3D G3DSA:1.10.1220.110 95 148 1.8E-187 T 13-10-2018 P40_06675 fcf0e8e1a153b16898397f055a37a510 531 Gene3D G3DSA:4.10.450.10 36 194 1.8E-187 T 13-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 P40_06675 fcf0e8e1a153b16898397f055a37a510 531 Gene3D G3DSA:3.50.50.60 2 525 1.8E-187 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_06675 fcf0e8e1a153b16898397f055a37a510 531 Pfam PF05199 GMC oxidoreductase 387 523 3.1E-42 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 P40_06675 fcf0e8e1a153b16898397f055a37a510 531 Pfam PF00732 GMC oxidoreductase 3 292 2.3E-99 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_06675 fcf0e8e1a153b16898397f055a37a510 531 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 251 265 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_06675 fcf0e8e1a153b16898397f055a37a510 531 SUPERFAMILY SSF54373 287 473 2.94E-50 T 13-10-2018 P40_06675 fcf0e8e1a153b16898397f055a37a510 531 SUPERFAMILY SSF51905 1 529 6.85E-93 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_06675 fcf0e8e1a153b16898397f055a37a510 531 PIRSF PIRSF000137 1 530 4.6E-152 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_06675 fcf0e8e1a153b16898397f055a37a510 531 Gene3D G3DSA:3.30.410.40 149 470 1.8E-187 T 13-10-2018 P40_06675 fcf0e8e1a153b16898397f055a37a510 531 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 80 103 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_12455 226bb533d5a47a9968d7b44cfc2c4965 503 PIRSF PIRSF001394 1 503 8.6E-216 T 13-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 P40_12455 226bb533d5a47a9968d7b44cfc2c4965 503 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 6.8E-65 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 P40_12455 226bb533d5a47a9968d7b44cfc2c4965 503 SUPERFAMILY SSF117457 315 487 6.93E-64 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 P40_12455 226bb533d5a47a9968d7b44cfc2c4965 503 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 1.5E-48 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 P40_12455 226bb533d5a47a9968d7b44cfc2c4965 503 Pfam PF05683 Fumarase C-terminus 288 488 6.9E-81 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 P40_12455 226bb533d5a47a9968d7b44cfc2c4965 503 Pfam PF05681 Fumarate hydratase (Fumerase) 11 284 1.9E-100 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 P40_12455 226bb533d5a47a9968d7b44cfc2c4965 503 Gene3D G3DSA:3.20.130.10 305 488 2.1E-61 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 P40_14770 98b80f6d5931f962a17a0a41099216aa 148 SUPERFAMILY SSF46955 12 134 1.39E-32 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_14770 98b80f6d5931f962a17a0a41099216aa 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 48 68 7.8E-22 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_14770 98b80f6d5931f962a17a0a41099216aa 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 7.8E-22 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_14770 98b80f6d5931f962a17a0a41099216aa 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 7.8E-22 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_14770 98b80f6d5931f962a17a0a41099216aa 148 Gene3D G3DSA:1.10.1660.10 1 135 3.4E-36 T 13-10-2018 P40_14770 98b80f6d5931f962a17a0a41099216aa 148 SMART SM00422 12 81 1.3E-32 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_14770 98b80f6d5931f962a17a0a41099216aa 148 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 13 136 6.1E-52 T 13-10-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 P40_14770 98b80f6d5931f962a17a0a41099216aa 148 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_14770 98b80f6d5931f962a17a0a41099216aa 148 Pfam PF13411 MerR HTH family regulatory protein 12 79 2.1E-19 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_19720 5238fd6b39225f34aeeff4f5913ab5fe 495 SUPERFAMILY SSF75304 2 484 1.83E-125 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_19720 5238fd6b39225f34aeeff4f5913ab5fe 495 Gene3D G3DSA:3.90.1300.10 5 495 1.2E-158 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_19720 5238fd6b39225f34aeeff4f5913ab5fe 495 Pfam PF01425 Amidase 27 475 1.6E-87 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_19720 5238fd6b39225f34aeeff4f5913ab5fe 495 ProSitePatterns PS00571 Amidases signature. 150 181 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 P40_02820 d4bedeb3c651d03701e2e8291fd57af6 84 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 P40_02820 d4bedeb3c651d03701e2e8291fd57af6 84 PRINTS PR00160 Glutaredoxin signature 60 73 2.3E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup P40_02820 d4bedeb3c651d03701e2e8291fd57af6 84 PRINTS PR00160 Glutaredoxin signature 4 22 2.3E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup P40_02820 d4bedeb3c651d03701e2e8291fd57af6 84 PRINTS PR00160 Glutaredoxin signature 46 59 2.3E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup P40_02820 d4bedeb3c651d03701e2e8291fd57af6 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 4.2E-34 T 13-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 P40_02820 d4bedeb3c651d03701e2e8291fd57af6 84 Gene3D G3DSA:3.40.30.10 1 83 1.7E-26 T 13-10-2018 P40_02820 d4bedeb3c651d03701e2e8291fd57af6 84 Pfam PF00462 Glutaredoxin 4 63 1.9E-19 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 P40_02820 d4bedeb3c651d03701e2e8291fd57af6 84 SUPERFAMILY SSF52833 2 83 8.43E-26 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_16290 9469b9f3f61b31f0b7f57e857e38b6ee 232 Gene3D G3DSA:3.40.50.2300 1 121 2.5E-35 T 13-10-2018 P40_16290 9469b9f3f61b31f0b7f57e857e38b6ee 232 Gene3D G3DSA:1.10.10.10 129 224 9.2E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_16290 9469b9f3f61b31f0b7f57e857e38b6ee 232 SMART SM00862 143 220 1.3E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_16290 9469b9f3f61b31f0b7f57e857e38b6ee 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 2.2E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_16290 9469b9f3f61b31f0b7f57e857e38b6ee 232 Pfam PF00072 Response regulator receiver domain 4 112 3.1E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_16290 9469b9f3f61b31f0b7f57e857e38b6ee 232 SUPERFAMILY SSF52172 1 124 1.28E-37 T 13-10-2018 IPR011006 CheY-like superfamily P40_16290 9469b9f3f61b31f0b7f57e857e38b6ee 232 SUPERFAMILY SSF46894 128 221 2.98E-25 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_16290 9469b9f3f61b31f0b7f57e857e38b6ee 232 SMART SM00448 2 112 2.9E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 SUPERFAMILY SSF63380 2 105 4.3E-25 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 SUPERFAMILY SSF54292 236 354 5.11E-29 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 SUPERFAMILY SSF52343 94 242 6.16E-33 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 Pfam PF00175 Oxidoreductase NAD-binding domain 118 226 5.9E-17 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 304 312 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 Gene3D G3DSA:3.40.50.80 111 247 4.0E-29 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 Pfam PF00970 Oxidoreductase FAD-binding domain 17 104 4.4E-12 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 273 346 6.9E-17 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 Gene3D G3DSA:3.10.20.30 250 357 5.0E-29 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 4 356 3.7E-141 T 13-10-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 Gene3D G3DSA:2.40.30.10 2 105 2.2E-22 T 13-10-2018 P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 PRINTS PR00410 Phenol hydroxylase reductase family signature 141 150 3.4E-7 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 PRINTS PR00410 Phenol hydroxylase reductase family signature 212 220 3.4E-7 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 PRINTS PR00410 Phenol hydroxylase reductase family signature 116 135 3.4E-7 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 P40_03890 68f2356254512a050f7fbaf2b93fb40d 358 PRINTS PR00410 Phenol hydroxylase reductase family signature 55 62 3.4E-7 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 P40_15625 a11831188ecfad7c4f8ad653ee6b9bb9 342 SUPERFAMILY SSF53850 30 265 1.87E-34 T 13-10-2018 P40_15625 a11831188ecfad7c4f8ad653ee6b9bb9 342 Pfam PF09084 NMT1/THI5 like 42 255 1.5E-39 T 13-10-2018 IPR015168 SsuA/THI5-like P40_15625 a11831188ecfad7c4f8ad653ee6b9bb9 342 Gene3D G3DSA:3.40.190.10 112 218 4.7E-61 T 13-10-2018 P40_15625 a11831188ecfad7c4f8ad653ee6b9bb9 342 Gene3D G3DSA:3.40.190.10 31 308 4.7E-61 T 13-10-2018 P40_18550 c07dee2b05383d641dd5d0a9486054b3 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 279 8.3E-98 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 P40_18550 c07dee2b05383d641dd5d0a9486054b3 284 Gene3D G3DSA:3.40.50.620 1 178 1.9E-76 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_18550 c07dee2b05383d641dd5d0a9486054b3 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 40.566 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 P40_18550 c07dee2b05383d641dd5d0a9486054b3 284 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 87 8.0E-10 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 P40_18550 c07dee2b05383d641dd5d0a9486054b3 284 Gene3D G3DSA:3.30.1300.10 179 282 3.0E-28 T 13-10-2018 P40_18550 c07dee2b05383d641dd5d0a9486054b3 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 277 2.5E-101 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 P40_18550 c07dee2b05383d641dd5d0a9486054b3 284 SUPERFAMILY SSF52374 1 279 7.51E-105 T 13-10-2018 P40_00315 9085ee3d42220e55f3901569ae58f1a0 139 SUPERFAMILY SSF50341 3 126 4.84E-10 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 P40_00315 9085ee3d42220e55f3901569ae58f1a0 139 Pfam PF01584 CheW-like domain 4 126 1.6E-9 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 P40_18935 7604d8df86bc460ab0d9dc93f4520825 128 Pfam PF11533 Protein of unknown function (DUF3225) 5 127 7.7E-58 T 13-10-2018 IPR024507 Protein of unknown function DUF3225 P40_18935 7604d8df86bc460ab0d9dc93f4520825 128 Gene3D G3DSA:3.10.450.50 2 128 1.5E-49 T 13-10-2018 P40_18935 7604d8df86bc460ab0d9dc93f4520825 128 SUPERFAMILY SSF54427 3 126 2.79E-40 T 13-10-2018 IPR032710 NTF2-like domain superfamily P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 SUPERFAMILY SSF82693 45 127 1.05E-18 T 13-10-2018 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 SUPERFAMILY SSF82866 294 505 4.19E-38 T 13-10-2018 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1039 0.0 T 13-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 Gene3D G3DSA:1.20.1640.10 13 519 2.1E-261 T 13-10-2018 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 SUPERFAMILY SSF82714 185 269 1.29E-18 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 Gene3D G3DSA:3.30.70.1430 42 817 2.1E-261 T 13-10-2018 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 SUPERFAMILY SSF82714 723 807 3.92E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 Gene3D G3DSA:3.30.70.1440 667 867 2.1E-261 T 13-10-2018 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 Gene3D G3DSA:1.20.1640.10 520 1032 2.1E-261 T 13-10-2018 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.3E-21 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.3E-21 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 3.3E-21 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 3.3E-21 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 3.3E-21 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 3.3E-21 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 Gene3D G3DSA:3.30.70.1320 135 330 2.1E-261 T 13-10-2018 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 Pfam PF00873 AcrB/AcrD/AcrF family 6 1035 3.3E-235 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 SUPERFAMILY SSF82866 806 1039 2.09E-48 T 13-10-2018 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 SUPERFAMILY SSF82693 137 328 3.49E-22 T 13-10-2018 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 Gene3D G3DSA:3.30.2090.10 181 272 2.1E-261 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 Gene3D G3DSA:3.30.70.1430 567 666 2.1E-261 T 13-10-2018 P40_12185 c8f109822f5b0a2e8712ccdb5a392429 1041 Gene3D G3DSA:3.30.2090.10 721 809 2.1E-261 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_20005 3b6e457860da803332d7a4d50b1f4a1e 162 SUPERFAMILY SSF54534 2 142 1.65E-42 T 13-10-2018 P40_20005 3b6e457860da803332d7a4d50b1f4a1e 162 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 138 1.4E-16 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain P40_20005 3b6e457860da803332d7a4d50b1f4a1e 162 Gene3D G3DSA:3.10.50.40 3 156 8.9E-58 T 13-10-2018 P40_20005 3b6e457860da803332d7a4d50b1f4a1e 162 Gene3D G3DSA:2.40.10.330 72 123 8.9E-58 T 13-10-2018 P40_13290 bd3518a8c6c51fb47ecb37e4b303d026 172 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 159 3.5E-41 T 13-10-2018 IPR018639 Domain of unknown function DUF2062 P40_11525 f55ee49f230c3f0b0e6a3a4052527bd1 192 Gene3D G3DSA:1.10.357.10 52 186 6.1E-32 T 13-10-2018 P40_11525 f55ee49f230c3f0b0e6a3a4052527bd1 192 Gene3D G3DSA:1.10.10.60 5 51 2.2E-17 T 13-10-2018 P40_11525 f55ee49f230c3f0b0e6a3a4052527bd1 192 SUPERFAMILY SSF46689 1 76 5.03E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_11525 f55ee49f230c3f0b0e6a3a4052527bd1 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 8.1E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_11525 f55ee49f230c3f0b0e6a3a4052527bd1 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.6E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_11525 f55ee49f230c3f0b0e6a3a4052527bd1 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.6E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_11525 f55ee49f230c3f0b0e6a3a4052527bd1 192 SUPERFAMILY SSF48498 81 182 1.78E-22 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_02710 7d648dbb64201234d6fb444042f96a68 271 SUPERFAMILY SSF56059 59 252 2.12E-25 T 13-10-2018 P40_02710 7d648dbb64201234d6fb444042f96a68 271 Gene3D G3DSA:3.30.470.20 150 251 2.9E-16 T 13-10-2018 P40_02710 7d648dbb64201234d6fb444042f96a68 271 Pfam PF08443 RimK-like ATP-grasp domain 94 234 2.6E-13 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 P40_05975 fb4311c4e9fae3b118f04016363e35c7 130 Gene3D G3DSA:3.10.180.10 1 129 3.3E-33 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_05975 fb4311c4e9fae3b118f04016363e35c7 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 2.2E-8 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain P40_05975 fb4311c4e9fae3b118f04016363e35c7 130 SUPERFAMILY SSF54593 2 129 4.3E-24 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_09330 9775eb07486950e08b0e11ce606d86f1 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.5E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09330 9775eb07486950e08b0e11ce606d86f1 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.5E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09330 9775eb07486950e08b0e11ce606d86f1 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.5E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09330 9775eb07486950e08b0e11ce606d86f1 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_09330 9775eb07486950e08b0e11ce606d86f1 265 Gene3D G3DSA:3.40.50.720 1 264 1.2E-67 T 13-10-2018 P40_09330 9775eb07486950e08b0e11ce606d86f1 265 SUPERFAMILY SSF51735 1 261 8.67E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_09330 9775eb07486950e08b0e11ce606d86f1 265 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 191 5.9E-4 T 13-10-2018 P40_09330 9775eb07486950e08b0e11ce606d86f1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09330 9775eb07486950e08b0e11ce606d86f1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09330 9775eb07486950e08b0e11ce606d86f1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09330 9775eb07486950e08b0e11ce606d86f1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09330 9775eb07486950e08b0e11ce606d86f1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09330 9775eb07486950e08b0e11ce606d86f1 265 Pfam PF00106 short chain dehydrogenase 8 193 2.7E-49 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06460 255eddf8408b1f8171235c5386f6a3f4 378 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 P40_06460 255eddf8408b1f8171235c5386f6a3f4 378 Gene3D G3DSA:3.40.47.10 5 261 1.3E-134 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_06460 255eddf8408b1f8171235c5386f6a3f4 378 SUPERFAMILY SSF53901 259 376 2.58E-42 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_06460 255eddf8408b1f8171235c5386f6a3f4 378 Gene3D G3DSA:3.40.47.10 127 375 1.3E-134 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_06460 255eddf8408b1f8171235c5386f6a3f4 378 SUPERFAMILY SSF53901 2 253 2.79E-69 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_06460 255eddf8408b1f8171235c5386f6a3f4 378 Pfam PF02803 Thiolase, C-terminal domain 257 376 2.3E-46 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_06460 255eddf8408b1f8171235c5386f6a3f4 378 Pfam PF00108 Thiolase, N-terminal domain 4 247 2.2E-60 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 P40_06460 255eddf8408b1f8171235c5386f6a3f4 378 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 376 8.2E-128 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_06460 255eddf8408b1f8171235c5386f6a3f4 378 ProSitePatterns PS00737 Thiolases signature 2. 324 340 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 P40_06460 255eddf8408b1f8171235c5386f6a3f4 378 PIRSF PIRSF000429 1 378 1.2E-123 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_05690 e8dbfb738355ff6d0a5149dbe48b094d 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 37.25 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P40_05690 e8dbfb738355ff6d0a5149dbe48b094d 143 SMART SM00562 3 140 2.9E-92 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P40_05690 e8dbfb738355ff6d0a5149dbe48b094d 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 5.5E-42 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P40_05690 e8dbfb738355ff6d0a5149dbe48b094d 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 5.5E-42 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P40_05690 e8dbfb738355ff6d0a5149dbe48b094d 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 5.5E-42 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P40_05690 e8dbfb738355ff6d0a5149dbe48b094d 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 5.5E-42 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P40_05690 e8dbfb738355ff6d0a5149dbe48b094d 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 5.5E-42 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P40_05690 e8dbfb738355ff6d0a5149dbe48b094d 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 3.0E-58 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P40_05690 e8dbfb738355ff6d0a5149dbe48b094d 143 Gene3D G3DSA:3.30.70.141 1 143 2.1E-60 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P40_05690 e8dbfb738355ff6d0a5149dbe48b094d 143 SUPERFAMILY SSF54919 1 141 9.17E-61 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P40_15780 943843c54a5c4e73544fe00a54cd7b88 306 SUPERFAMILY SSF46785 6 109 5.78E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_15780 943843c54a5c4e73544fe00a54cd7b88 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 4.6E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_15780 943843c54a5c4e73544fe00a54cd7b88 306 SUPERFAMILY SSF53850 94 300 4.03E-43 T 13-10-2018 P40_15780 943843c54a5c4e73544fe00a54cd7b88 306 Gene3D G3DSA:3.40.190.290 95 297 1.6E-57 T 13-10-2018 P40_15780 943843c54a5c4e73544fe00a54cd7b88 306 Gene3D G3DSA:1.10.10.10 6 93 3.3E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_15780 943843c54a5c4e73544fe00a54cd7b88 306 Pfam PF03466 LysR substrate binding domain 92 296 2.4E-38 T 13-10-2018 IPR005119 LysR, substrate-binding P40_15780 943843c54a5c4e73544fe00a54cd7b88 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_15780 943843c54a5c4e73544fe00a54cd7b88 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_15780 943843c54a5c4e73544fe00a54cd7b88 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.5E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_07960 bbe9165b3470ae2d88aa71791fd557b8 260 SUPERFAMILY SSF48256 5 241 6.15E-47 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 P40_07960 bbe9165b3470ae2d88aa71791fd557b8 260 Gene3D G3DSA:1.10.580.10 43 236 4.0E-23 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 P40_07960 bbe9165b3470ae2d88aa71791fd557b8 260 Pfam PF00285 Citrate synthase, C-terminal domain 45 239 6.7E-23 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_07960 bbe9165b3470ae2d88aa71791fd557b8 260 Gene3D G3DSA:1.10.230.10 105 210 4.0E-23 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain P40_18250 efb6ce891c486047e7ab2fee51be3f4d 200 SUPERFAMILY SSF52166 2 199 2.75E-74 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 P40_18250 efb6ce891c486047e7ab2fee51be3f4d 200 Gene3D G3DSA:3.40.1370.10 3 200 8.8E-70 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 P40_18250 efb6ce891c486047e7ab2fee51be3f4d 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 8.2E-75 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18250 efb6ce891c486047e7ab2fee51be3f4d 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.3E-64 T 13-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 P40_18250 efb6ce891c486047e7ab2fee51be3f4d 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 34.638 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_04475 fe60dabf2735d7954de790bb790b9792 264 SUPERFAMILY SSF49899 105 253 9.18E-9 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily P40_04475 fe60dabf2735d7954de790bb790b9792 264 Gene3D G3DSA:2.60.120.200 99 258 1.2E-7 T 13-10-2018 P40_09760 9344fd851f7026f35fc4717cd1ab601e 125 SUPERFAMILY SSF75169 1 125 1.0E-22 T 13-10-2018 IPR027396 DsrEFH-like P40_16480 70dd4dd968d69dad897bcf0764e5652c 87 Pfam PF04999 Cell division protein FtsL 6 84 1.8E-23 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 P40_16480 70dd4dd968d69dad897bcf0764e5652c 87 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 9 84 3.4E-21 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 P40_16480 70dd4dd968d69dad897bcf0764e5652c 87 Hamap MF_00910 Cell division protein FtsL [ftsL]. 2 85 15.479 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 P40_06530 b75aa14a0b494e507dc1f687660fe67d 187 SUPERFAMILY SSF55811 2 163 3.52E-39 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 P40_06530 b75aa14a0b494e507dc1f687660fe67d 187 Pfam PF14803 Nudix N-terminal 2 35 2.2E-16 T 13-10-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 P40_06530 b75aa14a0b494e507dc1f687660fe67d 187 Pfam PF00293 NUDIX domain 40 141 2.5E-12 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 P40_06530 b75aa14a0b494e507dc1f687660fe67d 187 Gene3D G3DSA:2.20.70.10 1 35 4.6E-19 T 13-10-2018 P40_06530 b75aa14a0b494e507dc1f687660fe67d 187 Gene3D G3DSA:3.90.79.10 36 180 2.0E-37 T 13-10-2018 P40_09895 f196e839a726ea3a91a01d4082105282 501 SUPERFAMILY SSF53901 280 392 1.27E-12 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_09895 f196e839a726ea3a91a01d4082105282 501 SUPERFAMILY SSF53901 13 259 1.58E-7 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_15485 11dd27f2e2e94d102ee2e751f40128af 319 SUPERFAMILY SSF161098 95 302 4.09E-18 T 13-10-2018 IPR035906 MetI-like superfamily P40_15485 11dd27f2e2e94d102ee2e751f40128af 319 Gene3D G3DSA:1.10.3720.10 95 309 1.7E-20 T 13-10-2018 IPR035906 MetI-like superfamily P40_15485 11dd27f2e2e94d102ee2e751f40128af 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 317 4.0E-39 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_20750 ba896caa1105d321bf433a10b2aa2ef7 432 Gene3D G3DSA:1.20.58.710 169 276 2.9E-109 T 13-10-2018 P40_20750 ba896caa1105d321bf433a10b2aa2ef7 432 Pfam PF00144 Beta-lactamase 123 410 6.4E-37 T 13-10-2018 IPR001466 Beta-lactamase-related P40_20750 ba896caa1105d321bf433a10b2aa2ef7 432 Gene3D G3DSA:3.40.710.10 116 409 2.9E-109 T 13-10-2018 P40_20750 ba896caa1105d321bf433a10b2aa2ef7 432 SUPERFAMILY SSF56601 40 431 1.1E-83 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like P40_01210 7dfd86effb80c62b2aba85b1d1f55fbe 418 Pfam PF07969 Amidohydrolase family 93 400 1.5E-32 T 13-10-2018 IPR013108 Amidohydrolase 3 P40_01210 7dfd86effb80c62b2aba85b1d1f55fbe 418 SUPERFAMILY SSF51556 51 371 7.21E-100 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_01210 7dfd86effb80c62b2aba85b1d1f55fbe 418 Gene3D G3DSA:3.20.20.140 52 359 1.2E-164 T 13-10-2018 P40_01210 7dfd86effb80c62b2aba85b1d1f55fbe 418 Gene3D G3DSA:2.30.40.10 5 405 1.2E-164 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_21445 1a8d667ebe6aceede2a887dc014683f7 358 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 22 172 2.6E-60 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 P40_21445 1a8d667ebe6aceede2a887dc014683f7 358 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 218 350 1.6E-58 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 P40_21445 1a8d667ebe6aceede2a887dc014683f7 358 Gene3D G3DSA:3.30.1060.10 6 179 1.3E-68 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 P40_21445 1a8d667ebe6aceede2a887dc014683f7 358 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 20 179 37.244 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 P40_21445 1a8d667ebe6aceede2a887dc014683f7 358 Pfam PF01625 Peptide methionine sulfoxide reductase 22 173 1.8E-62 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 P40_21445 1a8d667ebe6aceede2a887dc014683f7 358 Gene3D G3DSA:2.170.150.20 213 358 3.1E-56 T 13-10-2018 P40_21445 1a8d667ebe6aceede2a887dc014683f7 358 SUPERFAMILY SSF51316 218 357 3.35E-57 T 13-10-2018 IPR011057 Mss4-like superfamily P40_21445 1a8d667ebe6aceede2a887dc014683f7 358 Pfam PF01641 SelR domain 223 341 1.5E-45 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 P40_21445 1a8d667ebe6aceede2a887dc014683f7 358 SUPERFAMILY SSF55068 7 185 4.45E-75 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 P40_08155 c3cc8d04686a8b346b0f72174004afef 540 Gene3D G3DSA:3.40.50.10490 8 500 2.9E-198 T 13-10-2018 P40_08155 c3cc8d04686a8b346b0f72174004afef 540 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08155 c3cc8d04686a8b346b0f72174004afef 540 Pfam PF00342 Phosphoglucose isomerase 47 534 8.7E-164 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08155 c3cc8d04686a8b346b0f72174004afef 540 Gene3D G3DSA:3.40.50.10490 93 289 2.9E-198 T 13-10-2018 P40_08155 c3cc8d04686a8b346b0f72174004afef 540 SUPERFAMILY SSF53697 7 539 4.45E-172 T 13-10-2018 P40_08155 c3cc8d04686a8b346b0f72174004afef 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 4.1E-48 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08155 c3cc8d04686a8b346b0f72174004afef 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 491 504 4.1E-48 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08155 c3cc8d04686a8b346b0f72174004afef 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 477 491 4.1E-48 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08155 c3cc8d04686a8b346b0f72174004afef 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 459 477 4.1E-48 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08155 c3cc8d04686a8b346b0f72174004afef 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 143 162 4.1E-48 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08155 c3cc8d04686a8b346b0f72174004afef 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 4.1E-48 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08155 c3cc8d04686a8b346b0f72174004afef 540 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 41 518 36.982 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08155 c3cc8d04686a8b346b0f72174004afef 540 Gene3D G3DSA:1.10.1390.10 501 540 2.1E-14 T 13-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08155 c3cc8d04686a8b346b0f72174004afef 540 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 491 508 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_08780 8b84e743fee0d297e482efa35c56c311 272 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 6 250 8.1E-83 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 P40_08780 8b84e743fee0d297e482efa35c56c311 272 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 258 36.722 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 P40_08780 8b84e743fee0d297e482efa35c56c311 272 Pfam PF04205 FMN-binding domain 142 239 1.8E-14 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 P40_08780 8b84e743fee0d297e482efa35c56c311 272 SMART SM00900 142 243 8.4E-29 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 P40_08780 8b84e743fee0d297e482efa35c56c311 272 PIRSF PIRSF009437 1 258 2.7E-94 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 P40_06455 7070dee1163221261b9d8c60ff962f60 310 Gene3D G3DSA:1.10.760.10 161 277 1.6E-40 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_06455 7070dee1163221261b9d8c60ff962f60 310 Gene3D G3DSA:1.10.760.10 21 159 3.6E-34 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_06455 7070dee1163221261b9d8c60ff962f60 310 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 174 253 2.7E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_06455 7070dee1163221261b9d8c60ff962f60 310 SUPERFAMILY SSF46626 163 264 5.36E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_06455 7070dee1163221261b9d8c60ff962f60 310 SUPERFAMILY SSF46626 31 153 1.32E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_11390 e2f8dfc7eca77a1b7736a163b05bfa10 611 SUPERFAMILY SSF53850 59 605 1.18E-124 T 13-10-2018 P40_11390 e2f8dfc7eca77a1b7736a163b05bfa10 611 Gene3D G3DSA:3.40.190.10 37 606 2.3E-252 T 13-10-2018 P40_11390 e2f8dfc7eca77a1b7736a163b05bfa10 611 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 115 520 2.1E-84 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain P40_11390 e2f8dfc7eca77a1b7736a163b05bfa10 611 Gene3D G3DSA:3.10.105.10 326 584 2.3E-252 T 13-10-2018 P40_11390 e2f8dfc7eca77a1b7736a163b05bfa10 611 PIRSF PIRSF002741 11 609 4.9E-106 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 P40_08990 1cf9584cc1067d4c5a474d397886c79c 208 SUPERFAMILY SSF48498 101 203 1.09E-9 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_08990 1cf9584cc1067d4c5a474d397886c79c 208 SUPERFAMILY SSF46689 13 92 4.57E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_08990 1cf9584cc1067d4c5a474d397886c79c 208 Gene3D G3DSA:1.10.357.10 67 201 3.8E-14 T 13-10-2018 P40_08990 1cf9584cc1067d4c5a474d397886c79c 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 1.3E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_08990 1cf9584cc1067d4c5a474d397886c79c 208 Gene3D G3DSA:1.10.10.60 3 66 2.2E-16 T 13-10-2018 P40_08990 1cf9584cc1067d4c5a474d397886c79c 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 9.6E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_08990 1cf9584cc1067d4c5a474d397886c79c 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 9.6E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_02605 1805544a461c50cd5f84991306fe5be6 511 Gene3D G3DSA:3.90.76.10 42 189 6.2E-106 T 13-10-2018 P40_02605 1805544a461c50cd5f84991306fe5be6 511 SUPERFAMILY SSF53850 29 510 1.1E-111 T 13-10-2018 P40_02605 1805544a461c50cd5f84991306fe5be6 511 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 429 1.0E-67 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain P40_02605 1805544a461c50cd5f84991306fe5be6 511 PIRSF PIRSF002741 6 511 7.4E-82 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 P40_02605 1805544a461c50cd5f84991306fe5be6 511 Gene3D G3DSA:3.10.105.10 266 484 6.2E-106 T 13-10-2018 P40_02605 1805544a461c50cd5f84991306fe5be6 511 Gene3D G3DSA:3.40.190.10 190 494 6.2E-106 T 13-10-2018 P40_05125 91fe952ac3cdf63db64d0d4f004e2f0a 418 Gene3D G3DSA:3.40.605.10 14 414 9.4E-167 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_05125 91fe952ac3cdf63db64d0d4f004e2f0a 418 PIRSF PIRSF000151 1 418 2.6E-180 T 13-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 P40_05125 91fe952ac3cdf63db64d0d4f004e2f0a 418 Gene3D G3DSA:3.40.309.10 227 375 9.4E-167 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_05125 91fe952ac3cdf63db64d0d4f004e2f0a 418 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 407 2.3E-155 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 P40_05125 91fe952ac3cdf63db64d0d4f004e2f0a 418 Pfam PF00171 Aldehyde dehydrogenase family 310 374 1.2E-5 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_05125 91fe952ac3cdf63db64d0d4f004e2f0a 418 Pfam PF00171 Aldehyde dehydrogenase family 12 282 6.4E-18 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_05125 91fe952ac3cdf63db64d0d4f004e2f0a 418 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 417 42.562 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 P40_05125 91fe952ac3cdf63db64d0d4f004e2f0a 418 SUPERFAMILY SSF53720 6 417 2.75E-122 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_05125 91fe952ac3cdf63db64d0d4f004e2f0a 418 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 324 346 - T 13-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 P40_01730 a557bd19fd189df6d517903fa21b2a3c 386 SUPERFAMILY SSF52540 2 352 3.47E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_01730 a557bd19fd189df6d517903fa21b2a3c 386 Gene3D G3DSA:3.40.50.300 1 140 1.4E-9 T 13-10-2018 P40_01730 a557bd19fd189df6d517903fa21b2a3c 386 Gene3D G3DSA:3.40.50.300 226 372 3.4E-9 T 13-10-2018 P40_01730 a557bd19fd189df6d517903fa21b2a3c 386 Pfam PF13175 AAA ATPase domain 1 48 8.6E-8 T 13-10-2018 P40_01730 a557bd19fd189df6d517903fa21b2a3c 386 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 249 345 3.4E-20 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_01730 a557bd19fd189df6d517903fa21b2a3c 386 PIRSF PIRSF029347 1 386 2.4E-160 T 13-10-2018 IPR014555 RecF-like P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 SUPERFAMILY SSF82693 135 324 1.09E-18 T 13-10-2018 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 Gene3D G3DSA:3.30.2090.10 178 268 1.6E-289 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 Gene3D G3DSA:3.30.70.1320 134 326 1.6E-289 T 13-10-2018 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 SUPERFAMILY SSF82693 42 128 1.65E-19 T 13-10-2018 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 Gene3D G3DSA:3.30.70.1430 559 657 1.6E-289 T 13-10-2018 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 Gene3D G3DSA:3.30.70.1430 40 804 1.6E-289 T 13-10-2018 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 Gene3D G3DSA:3.30.70.1440 658 853 1.6E-289 T 13-10-2018 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 SUPERFAMILY SSF82866 793 1016 1.57E-46 T 13-10-2018 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 SUPERFAMILY SSF82714 709 794 2.88E-18 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 Gene3D G3DSA:1.20.1640.10 10 504 1.6E-289 T 13-10-2018 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 Gene3D G3DSA:3.30.2090.10 708 796 1.6E-289 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 SUPERFAMILY SSF82693 557 659 1.94E-17 T 13-10-2018 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 SUPERFAMILY SSF82866 289 490 1.96E-51 T 13-10-2018 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 SUPERFAMILY SSF82714 183 265 1.01E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 Pfam PF00873 AcrB/AcrD/AcrF family 4 1013 8.0E-268 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 Gene3D G3DSA:1.20.1640.10 505 1010 1.6E-289 T 13-10-2018 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.1E-75 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-75 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.1E-75 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.1E-75 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.1E-75 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 1.1E-75 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-75 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 PRINTS PR00702 Acriflavin resistance protein family signature 613 627 1.1E-75 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_01085 f0155facf02bc1264769d7b5d33aa9ae 1033 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.1E-75 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_05015 94553bc8eaab9a9a11e99142469d50bd 270 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 195 270 6.9E-20 T 13-10-2018 IPR006260 TonB/TolA, C-terminal P40_05015 94553bc8eaab9a9a11e99142469d50bd 270 Gene3D G3DSA:3.30.1150.10 183 270 6.1E-19 T 13-10-2018 P40_05015 94553bc8eaab9a9a11e99142469d50bd 270 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 193 270 6.4E-23 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 P40_05015 94553bc8eaab9a9a11e99142469d50bd 270 PRINTS PR01374 Gram-negative bacterial tonB protein signature 209 227 3.1E-14 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 P40_05015 94553bc8eaab9a9a11e99142469d50bd 270 PRINTS PR01374 Gram-negative bacterial tonB protein signature 85 95 3.1E-14 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 P40_05015 94553bc8eaab9a9a11e99142469d50bd 270 PRINTS PR01374 Gram-negative bacterial tonB protein signature 188 209 3.1E-14 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 P40_05015 94553bc8eaab9a9a11e99142469d50bd 270 SUPERFAMILY SSF74653 189 268 9.68E-18 T 13-10-2018 P40_07895 f0697dd6cd0d9f6715b62e46c0937406 319 SUPERFAMILY SSF51735 109 270 9.11E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_07895 f0697dd6cd0d9f6715b62e46c0937406 319 Gene3D G3DSA:3.90.180.10 18 314 1.4E-82 T 13-10-2018 P40_07895 f0697dd6cd0d9f6715b62e46c0937406 319 SUPERFAMILY SSF50129 9 142 5.97E-37 T 13-10-2018 IPR011032 GroES-like superfamily P40_07895 f0697dd6cd0d9f6715b62e46c0937406 319 SMART SM00829 9 317 4.0E-23 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P40_07895 f0697dd6cd0d9f6715b62e46c0937406 319 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 23 83 1.0E-9 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P40_07895 f0697dd6cd0d9f6715b62e46c0937406 319 Pfam PF00107 Zinc-binding dehydrogenase 148 261 3.6E-20 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 P40_07895 f0697dd6cd0d9f6715b62e46c0937406 319 Gene3D G3DSA:3.40.50.720 117 256 1.4E-82 T 13-10-2018 P40_17090 532bdab552f3c9ff045bfade4de7298d 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 P40_17090 532bdab552f3c9ff045bfade4de7298d 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 35.246 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 P40_17090 532bdab552f3c9ff045bfade4de7298d 194 Pfam PF01195 Peptidyl-tRNA hydrolase 6 190 7.3E-55 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 P40_17090 532bdab552f3c9ff045bfade4de7298d 194 Gene3D G3DSA:3.40.50.1470 1 194 2.0E-67 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 P40_17090 532bdab552f3c9ff045bfade4de7298d 194 SUPERFAMILY SSF53178 4 192 3.27E-69 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 P40_17090 532bdab552f3c9ff045bfade4de7298d 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 190 3.9E-66 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 P40_17090 532bdab552f3c9ff045bfade4de7298d 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 Pfam PF00800 Prephenate dehydratase 92 269 8.8E-65 T 13-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 Pfam PF01842 ACT domain 281 343 6.8E-9 T 13-10-2018 IPR002912 ACT domain P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 Pfam PF01817 Chorismate mutase type II 9 88 1.7E-22 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 PIRSF PIRSF001500 1 360 3.4E-139 T 13-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 Gene3D G3DSA:3.30.70.260 270 359 3.9E-28 T 13-10-2018 P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 TIGRFAM TIGR01807 CM_P2: chorismate mutase 5 80 9.5E-30 T 13-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 SMART SM00830 9 90 7.3E-29 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 Gene3D G3DSA:3.40.190.10 172 257 1.1E-61 T 13-10-2018 P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 243 265 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 305 312 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 Gene3D G3DSA:1.20.59.10 5 91 4.0E-29 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 SUPERFAMILY SSF48600 2 89 2.14E-20 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 SUPERFAMILY SSF53850 90 275 7.16E-63 T 13-10-2018 P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 SUPERFAMILY SSF55021 262 357 5.99E-28 T 13-10-2018 P40_13825 aa9d063d139f8b696d542b2faa0fc93a 360 Gene3D G3DSA:3.40.190.10 94 265 1.1E-61 T 13-10-2018 P40_20610 321893e0b713737a693e979ca334e3f2 542 SUPERFAMILY SSF63829 63 309 3.2E-37 T 13-10-2018 P40_20610 321893e0b713737a693e979ca334e3f2 542 Gene3D G3DSA:2.120.10.30 340 541 4.5E-11 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_20610 321893e0b713737a693e979ca334e3f2 542 SUPERFAMILY SSF101898 335 540 3.66E-20 T 13-10-2018 P40_20610 321893e0b713737a693e979ca334e3f2 542 Gene3D G3DSA:2.120.10.30 44 250 5.7E-13 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_20610 321893e0b713737a693e979ca334e3f2 542 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 53 295 1.2E-11 T 13-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region P40_20610 321893e0b713737a693e979ca334e3f2 542 Gene3D G3DSA:2.120.10.30 251 339 2.4E-7 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_14775 cb0407ab7726e06456f3cccb28ebb146 433 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 35 81 5.1E-10 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger P40_14775 cb0407ab7726e06456f3cccb28ebb146 433 Pfam PF01610 Transposase 152 386 1.3E-61 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain P40_04655 b933f833801c1592fea1f45131a0b02c 270 Pfam PF00149 Calcineurin-like phosphoesterase 2 77 1.2E-12 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 P40_04655 b933f833801c1592fea1f45131a0b02c 270 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 261 3.5E-82 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 P40_04655 b933f833801c1592fea1f45131a0b02c 270 Gene3D G3DSA:3.60.21.10 1 270 8.8E-74 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like P40_04655 b933f833801c1592fea1f45131a0b02c 270 SUPERFAMILY SSF56300 1 260 5.32E-54 T 13-10-2018 P40_04655 b933f833801c1592fea1f45131a0b02c 270 PIRSF PIRSF000903 1 270 2.8E-102 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 P40_14280 421997510f823671b9b691b441e92d5e 121 SUPERFAMILY SSF54534 38 107 1.96E-14 T 13-10-2018 P40_14280 421997510f823671b9b691b441e92d5e 121 PIRSF PIRSF006092 18 111 1.4E-16 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 P40_14280 421997510f823671b9b691b441e92d5e 121 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 74 90 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 P40_14280 421997510f823671b9b691b441e92d5e 121 Gene3D G3DSA:3.10.50.30 35 116 6.5E-18 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 P40_14280 421997510f823671b9b691b441e92d5e 121 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 38 107 7.4E-17 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 P40_17625 482790aec0fbc9a28a8c63130ed83ad8 755 SUPERFAMILY SSF52540 65 405 6.9E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_17625 482790aec0fbc9a28a8c63130ed83ad8 755 Gene3D G3DSA:3.40.50.10810 299 462 5.6E-8 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily P40_17625 482790aec0fbc9a28a8c63130ed83ad8 755 SMART SM00487 65 418 7.7E-8 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_17625 482790aec0fbc9a28a8c63130ed83ad8 755 Gene3D G3DSA:3.40.50.300 62 167 2.1E-7 T 13-10-2018 P40_17625 482790aec0fbc9a28a8c63130ed83ad8 755 SUPERFAMILY SSF52540 347 732 7.2E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_17625 482790aec0fbc9a28a8c63130ed83ad8 755 Pfam PF00271 Helicase conserved C-terminal domain 581 691 9.6E-5 T 13-10-2018 IPR001650 Helicase, C-terminal P40_17625 482790aec0fbc9a28a8c63130ed83ad8 755 Gene3D G3DSA:3.40.50.300 491 747 7.0E-21 T 13-10-2018 P40_04550 10e5be2d9e13b214db6765fb9414fedb 554 Gene3D G3DSA:3.40.50.12780 7 439 6.4E-81 T 13-10-2018 P40_04550 10e5be2d9e13b214db6765fb9414fedb 554 SUPERFAMILY SSF56801 11 546 3.53E-109 T 13-10-2018 P40_04550 10e5be2d9e13b214db6765fb9414fedb 554 Pfam PF00501 AMP-binding enzyme 21 445 9.1E-70 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_04550 10e5be2d9e13b214db6765fb9414fedb 554 ProSitePatterns PS00455 Putative AMP-binding domain signature. 198 209 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_04550 10e5be2d9e13b214db6765fb9414fedb 554 Gene3D G3DSA:3.30.300.30 441 550 1.4E-15 T 13-10-2018 P40_03275 689896cdf0f3b72431fb015eeed27425 388 Gene3D G3DSA:3.40.50.10540 6 386 7.7E-111 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_03275 689896cdf0f3b72431fb015eeed27425 388 Gene3D G3DSA:3.30.1540.10 234 326 7.7E-111 T 13-10-2018 P40_03275 689896cdf0f3b72431fb015eeed27425 388 Pfam PF02515 CoA-transferase family III 6 375 1.4E-105 T 13-10-2018 IPR003673 CoA-transferase family III GO:0003824 P40_03275 689896cdf0f3b72431fb015eeed27425 388 SUPERFAMILY SSF89796 4 387 2.88E-118 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_13070 e9aaae099fb96d2c254f1375b7b70a66 551 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 446 548 5.3E-52 T 13-10-2018 P40_13070 e9aaae099fb96d2c254f1375b7b70a66 551 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 3.6E-7 T 13-10-2018 P40_13070 e9aaae099fb96d2c254f1375b7b70a66 551 SUPERFAMILY SSF51905 4 448 1.25E-59 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_13070 e9aaae099fb96d2c254f1375b7b70a66 551 SUPERFAMILY SSF54862 452 551 3.97E-30 T 13-10-2018 P40_13070 e9aaae099fb96d2c254f1375b7b70a66 551 Gene3D G3DSA:3.30.9.90 79 450 2.3E-199 T 13-10-2018 P40_13070 e9aaae099fb96d2c254f1375b7b70a66 551 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 4.6E-5 T 13-10-2018 P40_13070 e9aaae099fb96d2c254f1375b7b70a66 551 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 4.6E-5 T 13-10-2018 P40_13070 e9aaae099fb96d2c254f1375b7b70a66 551 SUPERFAMILY SSF54373 211 307 3.45E-35 T 13-10-2018 P40_13070 e9aaae099fb96d2c254f1375b7b70a66 551 Gene3D G3DSA:3.50.50.60 7 386 2.3E-199 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_13070 e9aaae099fb96d2c254f1375b7b70a66 551 Gene3D G3DSA:3.30.70.20 451 546 9.6E-40 T 13-10-2018 P40_16625 dd78dccd86fa1f9d5263373518d0db95 235 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_16625 dd78dccd86fa1f9d5263373518d0db95 235 SUPERFAMILY SSF52540 2 225 1.07E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_16625 dd78dccd86fa1f9d5263373518d0db95 235 SMART SM00382 27 211 7.7E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_16625 dd78dccd86fa1f9d5263373518d0db95 235 Gene3D G3DSA:3.40.50.300 1 235 3.8E-59 T 13-10-2018 P40_16625 dd78dccd86fa1f9d5263373518d0db95 235 Pfam PF00005 ABC transporter 18 162 5.0E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_06755 99e7cd1cfe1e4d8e091ac3ecc2af14d8 217 Gene3D G3DSA:1.10.357.10 59 217 1.6E-52 T 13-10-2018 P40_06755 99e7cd1cfe1e4d8e091ac3ecc2af14d8 217 Gene3D G3DSA:1.10.10.60 7 58 2.1E-23 T 13-10-2018 P40_06755 99e7cd1cfe1e4d8e091ac3ecc2af14d8 217 SUPERFAMILY SSF46689 16 80 1.03E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06755 99e7cd1cfe1e4d8e091ac3ecc2af14d8 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 64 1.2E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_00905 81e8ff1db6d169b3e9075d363ee60808 200 SUPERFAMILY SSF46689 4 75 5.2E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_00905 81e8ff1db6d169b3e9075d363ee60808 200 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 193 35.154 T 13-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 P40_00905 81e8ff1db6d169b3e9075d363ee60808 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 58 1.6E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_00905 81e8ff1db6d169b3e9075d363ee60808 200 Gene3D G3DSA:1.10.357.10 7 193 6.5E-62 T 13-10-2018 P40_00905 81e8ff1db6d169b3e9075d363ee60808 200 SUPERFAMILY SSF48498 77 189 3.26E-10 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_16755 e1159ffc94bcbd4fc24d914af3c3b3d1 215 Gene3D G3DSA:3.40.190.10 8 201 1.9E-70 T 13-10-2018 P40_16755 e1159ffc94bcbd4fc24d914af3c3b3d1 215 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 145 166 - T 13-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 P40_16755 e1159ffc94bcbd4fc24d914af3c3b3d1 215 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 185 1.2E-56 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 P40_16755 e1159ffc94bcbd4fc24d914af3c3b3d1 215 SUPERFAMILY SSF53850 5 210 1.59E-63 T 13-10-2018 P40_16755 e1159ffc94bcbd4fc24d914af3c3b3d1 215 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 5 210 52.49 T 13-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 P40_16755 e1159ffc94bcbd4fc24d914af3c3b3d1 215 Gene3D G3DSA:3.40.190.10 97 178 1.9E-70 T 13-10-2018 P40_16755 e1159ffc94bcbd4fc24d914af3c3b3d1 215 Pfam PF01634 ATP phosphoribosyltransferase 55 205 4.3E-47 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 P40_05470 daa0e63bf0313f9698c9fc058b1296df 218 SMART SM00100 7 128 3.0E-11 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_05470 daa0e63bf0313f9698c9fc058b1296df 218 Gene3D G3DSA:2.60.120.10 1 147 8.0E-22 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_05470 daa0e63bf0313f9698c9fc058b1296df 218 SUPERFAMILY SSF46785 144 217 6.3E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_05470 daa0e63bf0313f9698c9fc058b1296df 218 Gene3D G3DSA:1.10.10.10 148 218 1.1E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_05470 daa0e63bf0313f9698c9fc058b1296df 218 Pfam PF13545 Crp-like helix-turn-helix domain 145 216 1.3E-14 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 P40_05470 daa0e63bf0313f9698c9fc058b1296df 218 SMART SM00419 161 209 0.0055 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 P40_05470 daa0e63bf0313f9698c9fc058b1296df 218 Pfam PF00027 Cyclic nucleotide-binding domain 26 112 5.0E-17 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_05470 daa0e63bf0313f9698c9fc058b1296df 218 SUPERFAMILY SSF51206 2 134 4.84E-28 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like P40_16425 945d1a8e70808de30306841ba7206fd2 411 Pfam PF14450 Cell division protein FtsA 206 373 1.9E-24 T 13-10-2018 P40_16425 945d1a8e70808de30306841ba7206fd2 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 411 31.95 T 13-10-2018 IPR020823 Cell division protein FtsA P40_16425 945d1a8e70808de30306841ba7206fd2 411 SUPERFAMILY SSF53067 197 377 1.01E-50 T 13-10-2018 P40_16425 945d1a8e70808de30306841ba7206fd2 411 Gene3D G3DSA:3.30.1490.110 86 168 2.3E-126 T 13-10-2018 P40_16425 945d1a8e70808de30306841ba7206fd2 411 PIRSF PIRSF003101 1 411 1.7E-159 T 13-10-2018 IPR020823 Cell division protein FtsA P40_16425 945d1a8e70808de30306841ba7206fd2 411 SUPERFAMILY SSF53067 8 196 2.38E-63 T 13-10-2018 P40_16425 945d1a8e70808de30306841ba7206fd2 411 Gene3D G3DSA:3.30.420.40 12 370 2.3E-126 T 13-10-2018 P40_16425 945d1a8e70808de30306841ba7206fd2 411 SMART SM00842 9 195 6.0E-107 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 P40_16425 945d1a8e70808de30306841ba7206fd2 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 377 1.0E-157 T 13-10-2018 IPR020823 Cell division protein FtsA P40_16425 945d1a8e70808de30306841ba7206fd2 411 Gene3D G3DSA:3.90.640.10 234 299 2.3E-126 T 13-10-2018 P40_16425 945d1a8e70808de30306841ba7206fd2 411 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 4.5E-33 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 P40_16425 945d1a8e70808de30306841ba7206fd2 411 Gene3D G3DSA:3.30.420.40 196 351 2.3E-126 T 13-10-2018 P40_16425 945d1a8e70808de30306841ba7206fd2 411 Pfam PF14450 Cell division protein FtsA 10 192 1.7E-11 T 13-10-2018 P40_06505 0fab86bcb74e849371f2b6a90c6b8ec5 148 Pfam PF14437 MafB19-like deaminase 2 147 1.2E-30 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 P40_06505 0fab86bcb74e849371f2b6a90c6b8ec5 148 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 89 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 P40_06505 0fab86bcb74e849371f2b6a90c6b8ec5 148 SUPERFAMILY SSF53927 2 148 6.69E-57 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 P40_06505 0fab86bcb74e849371f2b6a90c6b8ec5 148 Gene3D G3DSA:3.40.140.10 1 148 3.8E-60 T 13-10-2018 P40_06505 0fab86bcb74e849371f2b6a90c6b8ec5 148 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 7 148 45.329 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 P40_00500 9da2ceec50c462a976c80cb525bb5872 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 376 1.7E-39 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_00500 9da2ceec50c462a976c80cb525bb5872 379 Gene3D G3DSA:1.20.140.10 235 379 9.0E-43 T 13-10-2018 P40_00500 9da2ceec50c462a976c80cb525bb5872 379 Gene3D G3DSA:2.40.110.10 120 234 1.0E-42 T 13-10-2018 P40_00500 9da2ceec50c462a976c80cb525bb5872 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 5.4E-36 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_00500 9da2ceec50c462a976c80cb525bb5872 379 SUPERFAMILY SSF47203 226 378 2.58E-45 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_00500 9da2ceec50c462a976c80cb525bb5872 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_00500 9da2ceec50c462a976c80cb525bb5872 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_00500 9da2ceec50c462a976c80cb525bb5872 379 Gene3D G3DSA:1.10.540.10 2 119 1.3E-37 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_00500 9da2ceec50c462a976c80cb525bb5872 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 6.6E-27 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_00500 9da2ceec50c462a976c80cb525bb5872 379 SUPERFAMILY SSF56645 5 240 9.56E-87 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_21470 042e8588a082f1d652cfc81d082f9061 385 Gene3D G3DSA:3.90.1710.10 106 231 2.9E-39 T 13-10-2018 P40_21470 042e8588a082f1d652cfc81d082f9061 385 Pfam PF06545 Protein of unknown function (DUF1116) 85 289 6.6E-54 T 13-10-2018 IPR009499 Protein of unknown function DUF1116 P40_21470 042e8588a082f1d652cfc81d082f9061 385 Gene3D G3DSA:1.10.10.660 38 105 2.9E-39 T 13-10-2018 IPR024033 Uncharacterised domain superfamily, YlbE P40_21470 042e8588a082f1d652cfc81d082f9061 385 Gene3D G3DSA:3.90.1700.10 238 384 2.9E-20 T 13-10-2018 P40_17940 c674f9bdfec0f37d2115e2d47cdf8a43 395 Hamap MF_01454 GTPase Obg [obg]. 2 332 47.66 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 P40_17940 c674f9bdfec0f37d2115e2d47cdf8a43 395 Gene3D G3DSA:3.40.50.300 159 337 3.3E-51 T 13-10-2018 P40_17940 c674f9bdfec0f37d2115e2d47cdf8a43 395 Pfam PF01018 GTP1/OBG 4 158 2.4E-60 T 13-10-2018 IPR006169 GTP1/OBG domain P40_17940 c674f9bdfec0f37d2115e2d47cdf8a43 395 Pfam PF01926 50S ribosome-binding GTPase 161 283 9.0E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_17940 c674f9bdfec0f37d2115e2d47cdf8a43 395 SUPERFAMILY SSF52540 150 338 1.78E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_17940 c674f9bdfec0f37d2115e2d47cdf8a43 395 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 2.6E-143 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 P40_17940 c674f9bdfec0f37d2115e2d47cdf8a43 395 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.7E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_17940 c674f9bdfec0f37d2115e2d47cdf8a43 395 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.7E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_17940 c674f9bdfec0f37d2115e2d47cdf8a43 395 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.7E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_17940 c674f9bdfec0f37d2115e2d47cdf8a43 395 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.7E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_17940 c674f9bdfec0f37d2115e2d47cdf8a43 395 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 13-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 P40_17940 c674f9bdfec0f37d2115e2d47cdf8a43 395 SUPERFAMILY SSF82051 3 158 2.35E-56 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily P40_17940 c674f9bdfec0f37d2115e2d47cdf8a43 395 PIRSF PIRSF002401 1 379 3.8E-137 T 13-10-2018 IPR035101 GTP-binding protein, Obg-type P40_17940 c674f9bdfec0f37d2115e2d47cdf8a43 395 Gene3D G3DSA:2.70.210.12 1 158 7.9E-59 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily P40_13045 23edd306d7ef0f1c194e18a19f37eef9 265 Pfam PF01841 Transglutaminase-like superfamily 124 213 1.1E-22 T 13-10-2018 IPR002931 Transglutaminase-like P40_13045 23edd306d7ef0f1c194e18a19f37eef9 265 SMART SM00460 154 216 2.8E-19 T 13-10-2018 IPR002931 Transglutaminase-like P40_13045 23edd306d7ef0f1c194e18a19f37eef9 265 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 1.2E-22 T 13-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal P40_13045 23edd306d7ef0f1c194e18a19f37eef9 265 SUPERFAMILY SSF54001 94 255 1.57E-41 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily P40_13045 23edd306d7ef0f1c194e18a19f37eef9 265 Gene3D G3DSA:3.10.620.30 69 254 4.2E-45 T 13-10-2018 P40_07710 ca1add236da58f974c41209f23a7cfb6 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 106 170 8.2E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_07710 ca1add236da58f974c41209f23a7cfb6 468 SMART SM00388 106 170 8.3E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_07710 ca1add236da58f974c41209f23a7cfb6 468 SUPERFAMILY SSF47384 90 170 1.57E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_07710 ca1add236da58f974c41209f23a7cfb6 468 SUPERFAMILY SSF55874 161 326 3.93E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_07710 ca1add236da58f974c41209f23a7cfb6 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 250 264 2.3E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_07710 ca1add236da58f974c41209f23a7cfb6 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 303 2.3E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_07710 ca1add236da58f974c41209f23a7cfb6 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 278 2.3E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_07710 ca1add236da58f974c41209f23a7cfb6 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 322 2.3E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_07710 ca1add236da58f974c41209f23a7cfb6 468 Gene3D G3DSA:1.10.287.130 92 169 2.7E-13 T 13-10-2018 P40_07710 ca1add236da58f974c41209f23a7cfb6 468 SMART SM00448 347 462 4.0E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_07710 ca1add236da58f974c41209f23a7cfb6 468 Gene3D G3DSA:3.30.565.10 170 324 2.0E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_07710 ca1add236da58f974c41209f23a7cfb6 468 SMART SM00387 214 325 8.3E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_07710 ca1add236da58f974c41209f23a7cfb6 468 SUPERFAMILY SSF52172 345 467 5.41E-19 T 13-10-2018 IPR011006 CheY-like superfamily P40_07710 ca1add236da58f974c41209f23a7cfb6 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 215 324 2.7E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_07710 ca1add236da58f974c41209f23a7cfb6 468 Gene3D G3DSA:3.40.50.2300 343 468 1.7E-18 T 13-10-2018 P40_07710 ca1add236da58f974c41209f23a7cfb6 468 Pfam PF00072 Response regulator receiver domain 349 462 7.5E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_09545 64e74cf471f7c90567a3f83f0e3fe7c7 729 SUPERFAMILY SSF52540 475 703 7.07E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_09545 64e74cf471f7c90567a3f83f0e3fe7c7 729 Gene3D G3DSA:3.40.50.300 471 716 8.6E-68 T 13-10-2018 P40_09545 64e74cf471f7c90567a3f83f0e3fe7c7 729 SMART SM00382 511 697 1.7E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_09545 64e74cf471f7c90567a3f83f0e3fe7c7 729 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 21 714 1.3E-243 T 13-10-2018 IPR017750 ATPase, type I secretion system P40_09545 64e74cf471f7c90567a3f83f0e3fe7c7 729 Pfam PF00005 ABC transporter 507 651 2.3E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_09545 64e74cf471f7c90567a3f83f0e3fe7c7 729 Pfam PF00664 ABC transporter transmembrane region 174 438 8.4E-27 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 P40_09545 64e74cf471f7c90567a3f83f0e3fe7c7 729 Gene3D G3DSA:3.90.70.10 18 136 1.2E-7 T 13-10-2018 P40_09545 64e74cf471f7c90567a3f83f0e3fe7c7 729 SUPERFAMILY SSF90123 158 472 1.19E-52 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 P40_09545 64e74cf471f7c90567a3f83f0e3fe7c7 729 Gene3D G3DSA:1.20.1560.10 162 468 6.7E-55 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 P40_01900 30139cc888f823df7ee352a88fb0f017 347 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 324 1.6E-41 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_01900 30139cc888f823df7ee352a88fb0f017 347 Gene3D G3DSA:3.40.190.170 36 346 2.4E-75 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_20900 92c568d7d83e681a3b9ab4a218e23547 119 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 104 5.1E-25 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like P40_20485 664e8faaf3f40d5c61fdea0dc3658644 260 Gene3D G3DSA:3.40.50.720 2 259 1.5E-68 T 13-10-2018 P40_20485 664e8faaf3f40d5c61fdea0dc3658644 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_20485 664e8faaf3f40d5c61fdea0dc3658644 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.3E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20485 664e8faaf3f40d5c61fdea0dc3658644 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 1.3E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20485 664e8faaf3f40d5c61fdea0dc3658644 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 1.3E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20485 664e8faaf3f40d5c61fdea0dc3658644 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 8.5E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20485 664e8faaf3f40d5c61fdea0dc3658644 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.5E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20485 664e8faaf3f40d5c61fdea0dc3658644 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 8.5E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20485 664e8faaf3f40d5c61fdea0dc3658644 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 8.5E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20485 664e8faaf3f40d5c61fdea0dc3658644 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 8.5E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20485 664e8faaf3f40d5c61fdea0dc3658644 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 8.5E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20485 664e8faaf3f40d5c61fdea0dc3658644 260 SUPERFAMILY SSF51735 9 256 5.79E-59 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_20485 664e8faaf3f40d5c61fdea0dc3658644 260 Pfam PF00106 short chain dehydrogenase 9 209 1.4E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11865 9c17439098b4cd44a8aad864ee674396 663 Gene3D G3DSA:2.40.50.100 593 662 1.2E-21 T 13-10-2018 P40_11865 9c17439098b4cd44a8aad864ee674396 663 SUPERFAMILY SSF51246 333 448 3.19E-34 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 P40_11865 9c17439098b4cd44a8aad864ee674396 663 Gene3D G3DSA:3.30.470.130 1 450 2.0E-193 T 13-10-2018 P40_11865 9c17439098b4cd44a8aad864ee674396 663 Pfam PF02785 Biotin carboxylase C-terminal domain 338 442 2.6E-31 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_11865 9c17439098b4cd44a8aad864ee674396 663 SUPERFAMILY SSF52440 3 115 8.63E-48 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_11865 9c17439098b4cd44a8aad864ee674396 663 SUPERFAMILY SSF56059 85 350 4.77E-69 T 13-10-2018 P40_11865 9c17439098b4cd44a8aad864ee674396 663 SUPERFAMILY SSF51230 584 659 3.4E-19 T 13-10-2018 IPR011053 Single hybrid motif P40_11865 9c17439098b4cd44a8aad864ee674396 663 Pfam PF00364 Biotin-requiring enzyme 592 657 3.5E-15 T 13-10-2018 IPR000089 Biotin/lipoyl attachment P40_11865 9c17439098b4cd44a8aad864ee674396 663 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 112 9.9E-45 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_11865 9c17439098b4cd44a8aad864ee674396 663 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_11865 9c17439098b4cd44a8aad864ee674396 663 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 615 632 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_11865 9c17439098b4cd44a8aad864ee674396 663 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 325 1.8E-75 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_11865 9c17439098b4cd44a8aad864ee674396 663 SMART SM00878 338 442 1.5E-43 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_19340 aeed9f6ebce1203bb4e1d13fce49be72 344 Gene3D G3DSA:3.30.1490.300 77 136 3.8E-82 T 13-10-2018 P40_19340 aeed9f6ebce1203bb4e1d13fce49be72 344 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 2 342 2.8E-124 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM P40_19340 aeed9f6ebce1203bb4e1d13fce49be72 344 Gene3D G3DSA:3.30.420.40 2 340 3.8E-82 T 13-10-2018 P40_19340 aeed9f6ebce1203bb4e1d13fce49be72 344 Pfam PF11104 Type IV pilus assembly protein PilM; 3 342 2.8E-137 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM P40_19340 aeed9f6ebce1203bb4e1d13fce49be72 344 PIRSF PIRSF019169 1 343 7.0E-120 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM P40_19340 aeed9f6ebce1203bb4e1d13fce49be72 344 Gene3D G3DSA:3.30.420.40 175 306 3.8E-82 T 13-10-2018 P40_19340 aeed9f6ebce1203bb4e1d13fce49be72 344 SUPERFAMILY SSF53067 183 342 1.97E-24 T 13-10-2018 P40_19340 aeed9f6ebce1203bb4e1d13fce49be72 344 SUPERFAMILY SSF53067 2 167 1.49E-9 T 13-10-2018 P40_01385 44fc65a56f11fbd034b705e6a3735214 452 Gene3D G3DSA:2.40.160.60 237 452 6.7E-18 T 13-10-2018 P40_01385 44fc65a56f11fbd034b705e6a3735214 452 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 284 452 1.3E-9 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) P40_01385 44fc65a56f11fbd034b705e6a3735214 452 SUPERFAMILY SSF56935 46 452 1.46E-16 T 13-10-2018 P40_20580 ed5597f3147ef456dac03ebf5ebc5798 436 PIRSF PIRSF006066 5 436 6.7E-75 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_20580 ed5597f3147ef456dac03ebf5ebc5798 436 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 425 1.2E-65 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_11470 9ea1d43d2e452a0117ba0e97af37b537 282 SUPERFAMILY SSF53223 1 123 1.34E-38 T 13-10-2018 P40_11470 9ea1d43d2e452a0117ba0e97af37b537 282 Gene3D G3DSA:3.40.50.10860 8 273 2.9E-95 T 13-10-2018 P40_11470 9ea1d43d2e452a0117ba0e97af37b537 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 156 176 9.6E-48 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P40_11470 9ea1d43d2e452a0117ba0e97af37b537 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 111 132 9.6E-48 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P40_11470 9ea1d43d2e452a0117ba0e97af37b537 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 35 57 9.6E-48 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P40_11470 9ea1d43d2e452a0117ba0e97af37b537 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 76 103 9.6E-48 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P40_11470 9ea1d43d2e452a0117ba0e97af37b537 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 205 234 9.6E-48 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P40_11470 9ea1d43d2e452a0117ba0e97af37b537 282 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 257 265 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P40_11470 9ea1d43d2e452a0117ba0e97af37b537 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 280 34.413 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P40_11470 9ea1d43d2e452a0117ba0e97af37b537 282 SUPERFAMILY SSF51735 130 277 8.67E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_11470 9ea1d43d2e452a0117ba0e97af37b537 282 Gene3D G3DSA:3.40.50.720 6 256 2.9E-95 T 13-10-2018 P40_11470 9ea1d43d2e452a0117ba0e97af37b537 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 129 278 1.1E-56 T 13-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P40_11470 9ea1d43d2e452a0117ba0e97af37b537 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 122 1.8E-39 T 13-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P40_09325 0febc2b12c479b3490d4b4f8aec56e1c 380 Pfam PF01513 ATP-NAD kinase 9 372 9.3E-41 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 P40_09325 0febc2b12c479b3490d4b4f8aec56e1c 380 PIRSF PIRSF016907 5 375 1.4E-122 T 13-10-2018 IPR011386 Putative ATP-NAD kinase P40_09325 0febc2b12c479b3490d4b4f8aec56e1c 380 SUPERFAMILY SSF111331 94 152 4.36E-7 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily P40_09325 0febc2b12c479b3490d4b4f8aec56e1c 380 Gene3D G3DSA:3.40.50.10330 75 161 1.7E-5 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 P40_06385 5912bd93bd24deabbd6b1c775cfe3705 303 SUPERFAMILY SSF46785 7 89 1.07E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_06385 5912bd93bd24deabbd6b1c775cfe3705 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 2.0E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_06385 5912bd93bd24deabbd6b1c775cfe3705 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 4.4E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_06385 5912bd93bd24deabbd6b1c775cfe3705 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 4.4E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_06385 5912bd93bd24deabbd6b1c775cfe3705 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 4.4E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_06385 5912bd93bd24deabbd6b1c775cfe3705 303 SUPERFAMILY SSF53850 95 299 2.63E-50 T 13-10-2018 P40_06385 5912bd93bd24deabbd6b1c775cfe3705 303 Gene3D G3DSA:1.10.10.10 7 94 3.1E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_06385 5912bd93bd24deabbd6b1c775cfe3705 303 Gene3D G3DSA:3.40.190.290 96 296 1.6E-62 T 13-10-2018 P40_06385 5912bd93bd24deabbd6b1c775cfe3705 303 Pfam PF03466 LysR substrate binding domain 93 297 8.3E-50 T 13-10-2018 IPR005119 LysR, substrate-binding P40_03895 5b2dbd413729694eea84c3d54d27f3b5 683 Pfam PF00171 Aldehyde dehydrogenase family 25 500 2.1E-60 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_03895 5b2dbd413729694eea84c3d54d27f3b5 683 Gene3D G3DSA:3.40.605.10 10 487 3.0E-143 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_03895 5b2dbd413729694eea84c3d54d27f3b5 683 SUPERFAMILY SSF53720 3 503 6.68E-77 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_03895 5b2dbd413729694eea84c3d54d27f3b5 683 Pfam PF01575 MaoC like domain 540 640 7.7E-29 T 13-10-2018 IPR002539 MaoC-like dehydratase domain P40_03895 5b2dbd413729694eea84c3d54d27f3b5 683 SUPERFAMILY SSF54637 529 680 1.47E-41 T 13-10-2018 IPR029069 HotDog domain superfamily P40_03895 5b2dbd413729694eea84c3d54d27f3b5 683 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 4 678 1.7E-298 T 13-10-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 P40_03895 5b2dbd413729694eea84c3d54d27f3b5 683 Gene3D G3DSA:3.10.129.10 530 683 2.7E-45 T 13-10-2018 P40_03895 5b2dbd413729694eea84c3d54d27f3b5 683 Gene3D G3DSA:3.40.309.10 258 475 3.0E-143 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_20120 7dd58c534c569dd5fa3509b8fff31274 440 SUPERFAMILY SSF52317 244 434 6.45E-30 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_20120 7dd58c534c569dd5fa3509b8fff31274 440 SUPERFAMILY SSF52540 15 199 1.19E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_20120 7dd58c534c569dd5fa3509b8fff31274 440 Gene3D G3DSA:3.40.50.880 252 434 1.6E-9 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_20120 7dd58c534c569dd5fa3509b8fff31274 440 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 12 426 36.687 T 13-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 P40_20120 7dd58c534c569dd5fa3509b8fff31274 440 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 17 193 2.4E-11 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain P40_20120 7dd58c534c569dd5fa3509b8fff31274 440 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 245 424 1.1E-32 T 13-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 P40_20120 7dd58c534c569dd5fa3509b8fff31274 440 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 17 430 2.7E-82 T 13-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 P40_20120 7dd58c534c569dd5fa3509b8fff31274 440 Gene3D G3DSA:3.40.50.300 51 192 7.5E-14 T 13-10-2018 P40_00230 c84fa520d891ba48272592519e54fa63 214 SMART SM00882 7 204 3.4E-71 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 P40_00230 c84fa520d891ba48272592519e54fa63 214 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 209 1.1E-89 T 13-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 P40_00230 c84fa520d891ba48272592519e54fa63 214 Pfam PF01144 Coenzyme A transferase 8 202 1.1E-36 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 P40_00230 c84fa520d891ba48272592519e54fa63 214 SUPERFAMILY SSF100950 8 209 7.12E-64 T 13-10-2018 IPR037171 NagB/RpiA transferase-like P40_00230 c84fa520d891ba48272592519e54fa63 214 Gene3D G3DSA:3.40.1080.10 3 213 7.3E-88 T 13-10-2018 P40_03335 14ad6328db6bc9248462e61768e65bdd 153 Gene3D G3DSA:3.30.300.20 1 147 1.6E-40 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta P40_03335 14ad6328db6bc9248462e61768e65bdd 153 Pfam PF02566 OsmC-like protein 46 148 3.6E-14 T 13-10-2018 IPR003718 OsmC/Ohr family P40_03335 14ad6328db6bc9248462e61768e65bdd 153 SUPERFAMILY SSF82784 1 146 8.11E-38 T 13-10-2018 IPR036102 OsmC/Ohr superfamily P40_18320 653d56ec517b762c1d11cd5b2655330c 124 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.4E-16 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 P40_18320 653d56ec517b762c1d11cd5b2655330c 124 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.4E-16 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 P40_18320 653d56ec517b762c1d11cd5b2655330c 124 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.4E-16 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 P40_18320 653d56ec517b762c1d11cd5b2655330c 124 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 73 121 1.1E-18 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P40_18320 653d56ec517b762c1d11cd5b2655330c 124 Gene3D G3DSA:1.20.5.1030 67 122 1.7E-16 T 13-10-2018 IPR038379 SecE superfamily P40_18320 653d56ec517b762c1d11cd5b2655330c 124 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 71 123 1.1E-17 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 P40_18320 653d56ec517b762c1d11cd5b2655330c 124 Hamap MF_00422 Protein translocase subunit SecE [secE]. 66 123 12.879 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P40_07130 55db2ba6e91fd38f0648a102d2ac7539 228 SMART SM00535 20 149 1.6E-49 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 P40_07130 55db2ba6e91fd38f0648a102d2ac7539 228 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 P40_07130 55db2ba6e91fd38f0648a102d2ac7539 228 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 6.8E-69 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 P40_07130 55db2ba6e91fd38f0648a102d2ac7539 228 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 220 29.068 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 P40_07130 55db2ba6e91fd38f0648a102d2ac7539 228 Gene3D G3DSA:1.10.1520.10 1 147 3.2E-44 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 P40_07130 55db2ba6e91fd38f0648a102d2ac7539 228 Pfam PF00035 Double-stranded RNA binding motif 156 223 2.1E-11 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain P40_07130 55db2ba6e91fd38f0648a102d2ac7539 228 Gene3D G3DSA:3.30.160.20 154 226 5.3E-18 T 13-10-2018 P40_07130 55db2ba6e91fd38f0648a102d2ac7539 228 Pfam PF14622 Ribonuclease-III-like 22 140 1.8E-33 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 P40_07130 55db2ba6e91fd38f0648a102d2ac7539 228 SUPERFAMILY SSF69065 5 158 4.01E-48 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 P40_07130 55db2ba6e91fd38f0648a102d2ac7539 228 SUPERFAMILY SSF54768 109 223 7.07E-23 T 13-10-2018 P40_07130 55db2ba6e91fd38f0648a102d2ac7539 228 SMART SM00358 156 224 6.6E-21 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain P40_08015 97bbd1da59c78b15ac15d2ff8cd83be8 258 Pfam PF12833 Helix-turn-helix domain 181 257 1.2E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_08015 97bbd1da59c78b15ac15d2ff8cd83be8 258 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 212 253 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 P40_08015 97bbd1da59c78b15ac15d2ff8cd83be8 258 SMART SM00342 175 257 3.0E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_08015 97bbd1da59c78b15ac15d2ff8cd83be8 258 Gene3D G3DSA:1.10.10.60 160 258 5.9E-23 T 13-10-2018 P40_08015 97bbd1da59c78b15ac15d2ff8cd83be8 258 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 257 3.9E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_08015 97bbd1da59c78b15ac15d2ff8cd83be8 258 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 226 241 3.9E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_08015 97bbd1da59c78b15ac15d2ff8cd83be8 258 SUPERFAMILY SSF46689 212 257 1.88E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_08015 97bbd1da59c78b15ac15d2ff8cd83be8 258 SUPERFAMILY SSF51182 34 204 2.76E-9 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_20155 0f797fccff09ccb55ae7b93502b718db 339 Gene3D G3DSA:1.10.1610.10 12 335 6.4E-125 T 13-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 P40_20155 0f797fccff09ccb55ae7b93502b718db 339 SUPERFAMILY SSF52733 4 336 8.5E-110 T 13-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 P40_20155 0f797fccff09ccb55ae7b93502b718db 339 Gene3D G3DSA:3.40.50.10210 44 318 6.4E-125 T 13-10-2018 P40_20155 0f797fccff09ccb55ae7b93502b718db 339 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 4 335 7.5E-130 T 13-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 P40_20155 0f797fccff09ccb55ae7b93502b718db 339 Pfam PF02277 Phosphoribosyltransferase 2 335 3.9E-126 T 13-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 P40_20155 0f797fccff09ccb55ae7b93502b718db 339 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 2 337 35.368 T 13-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 P40_06035 74d255a782a3a7fda8d287c6f0c167cc 706 SUPERFAMILY SSF51126 530 682 7.53E-9 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor P40_06035 74d255a782a3a7fda8d287c6f0c167cc 706 Pfam PF12951 Passenger-associated-transport-repeat 563 591 1.3E-8 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat P40_06035 74d255a782a3a7fda8d287c6f0c167cc 706 SUPERFAMILY SSF48317 231 395 2.22E-21 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily P40_06035 74d255a782a3a7fda8d287c6f0c167cc 706 SMART SM00014 260 383 0.0027 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase P40_06035 74d255a782a3a7fda8d287c6f0c167cc 706 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 563 591 6.6E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat P40_06035 74d255a782a3a7fda8d287c6f0c167cc 706 Pfam PF01569 PAP2 superfamily 232 385 1.1E-11 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase P40_06035 74d255a782a3a7fda8d287c6f0c167cc 706 Gene3D G3DSA:1.20.144.10 294 402 2.9E-32 T 13-10-2018 P40_06035 74d255a782a3a7fda8d287c6f0c167cc 706 PRINTS PR00483 Bacterial acid phosphatase class A signature 346 370 8.5E-7 T 13-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 P40_06035 74d255a782a3a7fda8d287c6f0c167cc 706 PRINTS PR00483 Bacterial acid phosphatase class A signature 314 340 8.5E-7 T 13-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 P40_10820 28b24222b63663931ff581c7b4af94ca 549 SUPERFAMILY SSF56014 409 548 5.37E-38 T 13-10-2018 P40_10820 28b24222b63663931ff581c7b4af94ca 549 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 110 4.3E-13 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_10820 28b24222b63663931ff581c7b4af94ca 549 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 329 398 1.4E-15 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_10820 28b24222b63663931ff581c7b4af94ca 549 SUPERFAMILY SSF56014 120 273 5.1E-47 T 13-10-2018 P40_10820 28b24222b63663931ff581c7b4af94ca 549 Gene3D G3DSA:3.90.480.10 53 390 1.2E-78 T 13-10-2018 P40_10820 28b24222b63663931ff581c7b4af94ca 549 Gene3D G3DSA:3.30.413.10 119 317 1.2E-78 T 13-10-2018 P40_10820 28b24222b63663931ff581c7b4af94ca 549 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 273 4.9E-40 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_10820 28b24222b63663931ff581c7b4af94ca 549 SUPERFAMILY SSF55124 253 421 6.38E-24 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_10820 28b24222b63663931ff581c7b4af94ca 549 SUPERFAMILY SSF55124 1 126 9.49E-27 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_10820 28b24222b63663931ff581c7b4af94ca 549 Gene3D G3DSA:3.30.413.10 408 548 2.0E-30 T 13-10-2018 P40_10820 28b24222b63663931ff581c7b4af94ca 549 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 411 547 2.0E-11 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 P40_16045 c92faf7c74c6a4ed59ff8e238f582091 452 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 14 447 6.4E-170 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_16045 c92faf7c74c6a4ed59ff8e238f582091 452 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 31 446 6.6E-190 T 13-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_16045 c92faf7c74c6a4ed59ff8e238f582091 452 SUPERFAMILY SSF52540 105 374 2.74E-90 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_16045 c92faf7c74c6a4ed59ff8e238f582091 452 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 359 368 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_16045 c92faf7c74c6a4ed59ff8e238f582091 452 SMART SM00382 169 352 1.8E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_16045 c92faf7c74c6a4ed59ff8e238f582091 452 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 157 368 1.5E-71 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_16045 c92faf7c74c6a4ed59ff8e238f582091 452 Gene3D G3DSA:3.40.50.12240 23 450 1.9E-149 T 13-10-2018 P40_20720 54e1f22c3ab686bd2ef57bdfcb86c129 228 SUPERFAMILY SSF46689 119 166 5.82E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_20720 54e1f22c3ab686bd2ef57bdfcb86c129 228 Pfam PF12833 Helix-turn-helix domain 139 216 3.1E-15 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_20720 54e1f22c3ab686bd2ef57bdfcb86c129 228 SMART SM00342 133 215 5.8E-11 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_20720 54e1f22c3ab686bd2ef57bdfcb86c129 228 Gene3D G3DSA:1.10.10.60 119 219 4.3E-18 T 13-10-2018 P40_16600 cfd341efb733360f40afa5b7c6c64040 232 SMART SM00345 21 79 1.2E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_16600 cfd341efb733360f40afa5b7c6c64040 232 Gene3D G3DSA:1.20.120.530 82 221 1.1E-24 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_16600 cfd341efb733360f40afa5b7c6c64040 232 Pfam PF07729 FCD domain 90 213 1.4E-12 T 13-10-2018 IPR011711 GntR, C-terminal P40_16600 cfd341efb733360f40afa5b7c6c64040 232 SUPERFAMILY SSF46785 13 107 3.67E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_16600 cfd341efb733360f40afa5b7c6c64040 232 SMART SM00895 89 214 2.3E-8 T 13-10-2018 IPR011711 GntR, C-terminal P40_16600 cfd341efb733360f40afa5b7c6c64040 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 79 1.1E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_16600 cfd341efb733360f40afa5b7c6c64040 232 Gene3D G3DSA:1.10.10.10 4 80 4.0E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_16600 cfd341efb733360f40afa5b7c6c64040 232 SUPERFAMILY SSF48008 85 217 4.18E-13 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_04630 f4d89cd3101aef3f36c8ab26990f273c 414 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 211 1.6E-12 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 P40_04630 f4d89cd3101aef3f36c8ab26990f273c 414 Gene3D G3DSA:1.10.3090.10 122 406 1.0E-38 T 13-10-2018 P40_04630 f4d89cd3101aef3f36c8ab26990f273c 414 SUPERFAMILY SSF81301 1 119 2.94E-28 T 13-10-2018 P40_04630 f4d89cd3101aef3f36c8ab26990f273c 414 SUPERFAMILY SSF81891 120 350 5.36E-45 T 13-10-2018 P40_04630 f4d89cd3101aef3f36c8ab26990f273c 414 PIRSF PIRSF000813 1 408 4.5E-165 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 P40_04630 f4d89cd3101aef3f36c8ab26990f273c 414 Pfam PF01743 Poly A polymerase head domain 3 122 4.3E-17 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 P40_04630 f4d89cd3101aef3f36c8ab26990f273c 414 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 41.082 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 P40_04630 f4d89cd3101aef3f36c8ab26990f273c 414 Gene3D G3DSA:3.30.460.10 1 121 5.1E-28 T 13-10-2018 P40_19225 c1769b9a280be8c2eb1f89fc306480b9 304 Gene3D G3DSA:1.10.10.10 1 87 8.5E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_19225 c1769b9a280be8c2eb1f89fc306480b9 304 Gene3D G3DSA:3.40.190.10 171 265 2.7E-52 T 13-10-2018 P40_19225 c1769b9a280be8c2eb1f89fc306480b9 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.9E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_19225 c1769b9a280be8c2eb1f89fc306480b9 304 Pfam PF03466 LysR substrate binding domain 96 294 1.9E-19 T 13-10-2018 IPR005119 LysR, substrate-binding P40_19225 c1769b9a280be8c2eb1f89fc306480b9 304 SUPERFAMILY SSF53850 90 292 5.97E-38 T 13-10-2018 P40_19225 c1769b9a280be8c2eb1f89fc306480b9 304 Gene3D G3DSA:3.40.190.10 92 289 2.7E-52 T 13-10-2018 P40_19225 c1769b9a280be8c2eb1f89fc306480b9 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.6E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_19225 c1769b9a280be8c2eb1f89fc306480b9 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.6E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_19225 c1769b9a280be8c2eb1f89fc306480b9 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.6E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_19225 c1769b9a280be8c2eb1f89fc306480b9 304 SUPERFAMILY SSF46785 2 83 1.74E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_08220 993fd2db64f9bb3ce533fee166bad50b 95 SUPERFAMILY SSF47598 4 48 3.72E-5 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 P40_17055 ade1787b86df474a0f80c3f770028136 421 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 408 2.4E-131 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 P40_17055 ade1787b86df474a0f80c3f770028136 421 SUPERFAMILY SSF69075 315 412 1.2E-18 T 13-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 P40_17055 ade1787b86df474a0f80c3f770028136 421 SUPERFAMILY SSF51735 160 313 4.56E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_17055 ade1787b86df474a0f80c3f770028136 421 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 413 1.2E-15 T 13-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 P40_17055 ade1787b86df474a0f80c3f770028136 421 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 303 3.4E-47 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase P40_17055 ade1787b86df474a0f80c3f770028136 421 PIRSF PIRSF000445 1 420 2.9E-148 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 P40_17055 ade1787b86df474a0f80c3f770028136 421 Gene3D G3DSA:3.40.50.720 160 311 2.5E-47 T 13-10-2018 P40_17055 ade1787b86df474a0f80c3f770028136 421 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 29.655 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 P40_17055 ade1787b86df474a0f80c3f770028136 421 Gene3D G3DSA:3.30.460.30 1 156 4.6E-51 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 P40_17055 ade1787b86df474a0f80c3f770028136 421 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 13-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 P40_17055 ade1787b86df474a0f80c3f770028136 421 SUPERFAMILY SSF69742 1 156 3.14E-45 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 P40_17055 ade1787b86df474a0f80c3f770028136 421 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 6.6E-45 T 13-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 P40_14210 523382c2a75ee52fbcf58ee3e8d25e0c 335 ProSitePatterns PS01276 Peptidase family U32 signature. 165 183 - T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 P40_14210 523382c2a75ee52fbcf58ee3e8d25e0c 335 Pfam PF01136 Peptidase family U32 81 334 1.8E-64 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 P40_18170 755fd9509d44898a98af3358418c3e04 165 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 74 8.0E-28 T 13-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 P40_18170 755fd9509d44898a98af3358418c3e04 165 SUPERFAMILY SSF54768 8 75 4.92E-23 T 13-10-2018 P40_18170 755fd9509d44898a98af3358418c3e04 165 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 162 1.7E-67 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 P40_18170 755fd9509d44898a98af3358418c3e04 165 Gene3D G3DSA:3.30.230.10 73 165 3.1E-38 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P40_18170 755fd9509d44898a98af3358418c3e04 165 SUPERFAMILY SSF54211 79 158 4.55E-27 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_18170 755fd9509d44898a98af3358418c3e04 165 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 13-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site P40_18170 755fd9509d44898a98af3358418c3e04 165 Gene3D G3DSA:3.30.160.20 2 72 3.8E-30 T 13-10-2018 P40_18170 755fd9509d44898a98af3358418c3e04 165 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 162 34.863 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 P40_18170 755fd9509d44898a98af3358418c3e04 165 Pfam PF03719 Ribosomal protein S5, C-terminal domain 86 156 7.5E-31 T 13-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 P40_15830 78fc13c226947ebd5b0d44eb33c4e719 812 Gene3D G3DSA:2.140.10.10 165 548 4.4E-106 T 13-10-2018 P40_15830 78fc13c226947ebd5b0d44eb33c4e719 812 SMART SM00564 732 765 0.19 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_15830 78fc13c226947ebd5b0d44eb33c4e719 812 SMART SM00564 488 521 110.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_15830 78fc13c226947ebd5b0d44eb33c4e719 812 SMART SM00564 293 323 270.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_15830 78fc13c226947ebd5b0d44eb33c4e719 812 SMART SM00564 222 253 0.77 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_15830 78fc13c226947ebd5b0d44eb33c4e719 812 SMART SM00564 348 389 7.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_15830 78fc13c226947ebd5b0d44eb33c4e719 812 SUPERFAMILY SSF50998 168 809 4.97E-134 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily P40_15830 78fc13c226947ebd5b0d44eb33c4e719 812 Pfam PF01011 PQQ enzyme repeat 452 477 3.8E-5 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_15830 78fc13c226947ebd5b0d44eb33c4e719 812 Gene3D G3DSA:2.140.10.10 555 810 2.5E-31 T 13-10-2018 P40_15830 78fc13c226947ebd5b0d44eb33c4e719 812 Pfam PF13360 PQQ-like domain 208 400 3.4E-5 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_15830 78fc13c226947ebd5b0d44eb33c4e719 812 Pfam PF13360 PQQ-like domain 687 778 3.7E-7 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_15830 78fc13c226947ebd5b0d44eb33c4e719 812 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 13 809 4.6E-285 T 13-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 P40_13405 70f48af67357bd2d0900c68bbe4fc013 209 Pfam PF01126 Heme oxygenase 14 198 9.1E-19 T 13-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 P40_13405 70f48af67357bd2d0900c68bbe4fc013 209 Gene3D G3DSA:1.20.910.10 5 206 9.4E-46 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 P40_13405 70f48af67357bd2d0900c68bbe4fc013 209 SUPERFAMILY SSF48613 14 201 1.49E-43 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 P40_21170 980b137a03cddb77b889ced215400528 126 SUPERFAMILY SSF55718 17 117 3.83E-6 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily P40_21170 980b137a03cddb77b889ced215400528 126 Gene3D G3DSA:3.30.1050.10 15 120 9.2E-7 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily P40_01260 f69c8e78a1949de4b1396ddaee904ff3 382 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 382 57.795 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P40_01260 f69c8e78a1949de4b1396ddaee904ff3 382 SUPERFAMILY SSF55973 6 110 1.22E-43 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P40_01260 f69c8e78a1949de4b1396ddaee904ff3 382 Pfam PF02772 S-adenosylmethionine synthetase, central domain 116 232 1.9E-44 T 13-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P40_01260 f69c8e78a1949de4b1396ddaee904ff3 382 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P40_01260 f69c8e78a1949de4b1396ddaee904ff3 382 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 370 1.9E-70 T 13-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P40_01260 f69c8e78a1949de4b1396ddaee904ff3 382 PIRSF PIRSF000497 1 382 1.6E-171 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P40_01260 f69c8e78a1949de4b1396ddaee904ff3 382 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 102 9.6E-40 T 13-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P40_01260 f69c8e78a1949de4b1396ddaee904ff3 382 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P40_01260 f69c8e78a1949de4b1396ddaee904ff3 382 SUPERFAMILY SSF55973 112 233 4.32E-52 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P40_01260 f69c8e78a1949de4b1396ddaee904ff3 382 Gene3D G3DSA:3.30.300.10 12 271 3.8E-175 T 13-10-2018 P40_01260 f69c8e78a1949de4b1396ddaee904ff3 382 Gene3D G3DSA:3.30.300.10 6 234 3.8E-175 T 13-10-2018 P40_01260 f69c8e78a1949de4b1396ddaee904ff3 382 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 381 1.6E-188 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P40_01260 f69c8e78a1949de4b1396ddaee904ff3 382 SUPERFAMILY SSF55973 234 381 2.16E-71 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P40_01260 f69c8e78a1949de4b1396ddaee904ff3 382 Gene3D G3DSA:3.30.300.10 103 374 3.8E-175 T 13-10-2018 P40_13340 d17002cb05f1774dbb5ab0e129dc8b2a 80 Gene3D G3DSA:3.30.110.40 3 79 5.8E-28 T 13-10-2018 IPR036868 TusA-like domain superfamily P40_13340 d17002cb05f1774dbb5ab0e129dc8b2a 80 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 11 35 - T 13-10-2018 IPR001455 TusA-like domain P40_13340 d17002cb05f1774dbb5ab0e129dc8b2a 80 SUPERFAMILY SSF64307 6 78 9.81E-25 T 13-10-2018 IPR036868 TusA-like domain superfamily P40_13340 d17002cb05f1774dbb5ab0e129dc8b2a 80 Pfam PF01206 Sulfurtransferase TusA 9 78 7.4E-24 T 13-10-2018 IPR001455 TusA-like domain P40_15650 85bad3bdfe4407513c40c530c35a44a3 204 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 10 189 2.3E-53 T 13-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG P40_15650 85bad3bdfe4407513c40c530c35a44a3 204 Pfam PF03641 Possible lysine decarboxylase 53 186 5.1E-32 T 13-10-2018 IPR031100 LOG family P40_15650 85bad3bdfe4407513c40c530c35a44a3 204 Gene3D G3DSA:3.40.50.450 2 202 4.2E-66 T 13-10-2018 P40_15650 85bad3bdfe4407513c40c530c35a44a3 204 SUPERFAMILY SSF102405 9 190 7.17E-53 T 13-10-2018 P40_00925 46ff98620c5b1b12adf483ed5aab9a98 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 369 2.5E-71 T 13-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 P40_00925 46ff98620c5b1b12adf483ed5aab9a98 399 Gene3D G3DSA:3.40.50.1950 1 184 6.4E-57 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 P40_00925 46ff98620c5b1b12adf483ed5aab9a98 399 Pfam PF02441 Flavoprotein 7 179 1.3E-45 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 P40_00925 46ff98620c5b1b12adf483ed5aab9a98 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 393 5.8E-150 T 13-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 P40_00925 46ff98620c5b1b12adf483ed5aab9a98 399 Gene3D G3DSA:3.40.50.10300 185 399 1.2E-78 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 P40_00925 46ff98620c5b1b12adf483ed5aab9a98 399 SUPERFAMILY SSF52507 2 181 6.15E-63 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 P40_00925 46ff98620c5b1b12adf483ed5aab9a98 399 SUPERFAMILY SSF102645 185 397 8.89E-77 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 P40_16145 c9cdadce791f8a80def5038b5366c1bb 135 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 7 132 4.6E-37 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 P40_16145 c9cdadce791f8a80def5038b5366c1bb 135 Pfam PF00460 Flagella basal body rod protein 10 39 1.8E-4 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 P40_16145 c9cdadce791f8a80def5038b5366c1bb 135 PIRSF PIRSF002889 1 135 6.3E-42 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 P40_19840 07bca4c5fee28bac80210d03e6553d37 486 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 472 44.204 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 P40_19840 07bca4c5fee28bac80210d03e6553d37 486 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 13 455 2.9E-111 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 P40_03440 1fc1d2d52d156a4e99fdc38b15424f51 87 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 85 1.8E-8 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family P40_03440 1fc1d2d52d156a4e99fdc38b15424f51 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 7 86 7.9E-26 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 P40_03440 1fc1d2d52d156a4e99fdc38b15424f51 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 26 86 6.2E-9 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 P40_03440 1fc1d2d52d156a4e99fdc38b15424f51 87 SUPERFAMILY SSF143011 2 87 2.09E-19 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily P40_03440 1fc1d2d52d156a4e99fdc38b15424f51 87 Gene3D G3DSA:3.30.2310.20 3 86 1.2E-11 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily P40_04980 e721d5e6f4247382cb7ac0a002f53f29 380 Pfam PF03929 PepSY-associated TM region 12 359 3.0E-58 T 13-10-2018 IPR005625 PepSY-associated TM protein P40_16685 93d08ecfb9e8500a695059cd3711338c 110 SUPERFAMILY SSF47598 69 107 2.45E-6 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 P40_16685 93d08ecfb9e8500a695059cd3711338c 110 SUPERFAMILY SSF143100 1 73 1.44E-16 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like P40_16685 93d08ecfb9e8500a695059cd3711338c 110 Pfam PF05534 HicB family 54 104 2.7E-20 T 13-10-2018 IPR008651 Uncharacterised protein family HicB P40_00080 b47a5193910243862eb46e404a1d067f 188 Gene3D G3DSA:1.10.340.30 1 186 1.4E-82 T 13-10-2018 P40_00080 b47a5193910243862eb46e404a1d067f 188 SUPERFAMILY SSF48150 2 185 1.08E-79 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 P40_00080 b47a5193910243862eb46e404a1d067f 188 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 2 180 9.4E-80 T 13-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 P40_00080 b47a5193910243862eb46e404a1d067f 188 Pfam PF03352 Methyladenine glycosylase 6 181 3.3E-78 T 13-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 P40_13375 bf8b55a1b49c0e42190b90b1b56f56f3 311 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_13375 bf8b55a1b49c0e42190b90b1b56f56f3 311 SUPERFAMILY SSF52540 6 228 4.22E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_13375 bf8b55a1b49c0e42190b90b1b56f56f3 311 SMART SM00382 31 212 3.3E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_13375 bf8b55a1b49c0e42190b90b1b56f56f3 311 Pfam PF00005 ABC transporter 23 166 6.5E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_13375 bf8b55a1b49c0e42190b90b1b56f56f3 311 Gene3D G3DSA:3.40.50.300 1 232 3.4E-71 T 13-10-2018 P40_14130 8be6f3bf507132b8d3fba9102158ec2f 210 Gene3D G3DSA:3.40.50.2300 2 133 1.3E-43 T 13-10-2018 P40_14130 8be6f3bf507132b8d3fba9102158ec2f 210 Gene3D G3DSA:1.10.10.10 134 203 4.9E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14130 8be6f3bf507132b8d3fba9102158ec2f 210 SMART SM00421 141 198 6.9E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_14130 8be6f3bf507132b8d3fba9102158ec2f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 2.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_14130 8be6f3bf507132b8d3fba9102158ec2f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 2.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_14130 8be6f3bf507132b8d3fba9102158ec2f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 2.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_14130 8be6f3bf507132b8d3fba9102158ec2f 210 SMART SM00448 6 117 3.3E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_14130 8be6f3bf507132b8d3fba9102158ec2f 210 SUPERFAMILY SSF52172 8 152 3.84E-31 T 13-10-2018 IPR011006 CheY-like superfamily P40_14130 8be6f3bf507132b8d3fba9102158ec2f 210 Pfam PF00072 Response regulator receiver domain 8 117 4.6E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_14130 8be6f3bf507132b8d3fba9102158ec2f 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_14130 8be6f3bf507132b8d3fba9102158ec2f 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 198 1.2E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_14130 8be6f3bf507132b8d3fba9102158ec2f 210 SUPERFAMILY SSF46894 131 205 4.08E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_05720 1bc5856c8532e3670c29eaf218d0c935 211 Gene3D G3DSA:1.25.40.10 42 207 1.1E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05720 1bc5856c8532e3670c29eaf218d0c935 211 SUPERFAMILY SSF48452 92 190 1.68E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05720 1bc5856c8532e3670c29eaf218d0c935 211 Pfam PF09976 Tetratricopeptide repeat-like domain 12 208 9.5E-54 T 13-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 P40_05720 1bc5856c8532e3670c29eaf218d0c935 211 PIRSF PIRSF006170 1 211 8.2E-57 T 13-10-2018 IPR026039 Uncharacterised protein family UPF0070 P40_11430 c8a427e29f3e978e0740fc41d36ab8a6 90 SMART SM00411 1 90 9.0E-47 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_11430 c8a427e29f3e978e0740fc41d36ab8a6 90 Gene3D G3DSA:4.10.520.10 1 90 1.5E-37 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 P40_11430 c8a427e29f3e978e0740fc41d36ab8a6 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 P40_11430 c8a427e29f3e978e0740fc41d36ab8a6 90 SUPERFAMILY SSF47729 1 90 1.06E-33 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 P40_11430 c8a427e29f3e978e0740fc41d36ab8a6 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 5.3E-35 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_11430 c8a427e29f3e978e0740fc41d36ab8a6 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 9.5E-20 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_11430 c8a427e29f3e978e0740fc41d36ab8a6 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 9.5E-20 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_11430 c8a427e29f3e978e0740fc41d36ab8a6 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 9.5E-20 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_20615 6b6d3b1921d1ce577a9fc5d87ac473a2 227 Pfam PF04493 Endonuclease V 22 212 1.1E-73 T 13-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 P40_20615 6b6d3b1921d1ce577a9fc5d87ac473a2 227 Gene3D G3DSA:3.30.2170.10 2 224 4.1E-79 T 13-10-2018 P40_20615 6b6d3b1921d1ce577a9fc5d87ac473a2 227 Hamap MF_00801 Endonuclease V [nfi]. 11 222 33.989 T 13-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 P40_10790 aa82669dad81eb8dd0e41b381021f7a4 274 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 52 112 3.8E-5 T 13-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 P40_10790 aa82669dad81eb8dd0e41b381021f7a4 274 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 115 145 3.4E-14 T 13-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 P40_10790 aa82669dad81eb8dd0e41b381021f7a4 274 Gene3D G3DSA:3.90.79.20 6 146 8.0E-32 T 13-10-2018 P40_10790 aa82669dad81eb8dd0e41b381021f7a4 274 PRINTS PR00502 NUDIX hydrolase family signature 175 189 3.3E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 P40_10790 aa82669dad81eb8dd0e41b381021f7a4 274 PRINTS PR00502 NUDIX hydrolase family signature 189 204 3.3E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 P40_10790 aa82669dad81eb8dd0e41b381021f7a4 274 Pfam PF00293 NUDIX domain 152 253 2.3E-15 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 P40_10790 aa82669dad81eb8dd0e41b381021f7a4 274 SUPERFAMILY SSF55811 12 117 6.69E-14 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 P40_10790 aa82669dad81eb8dd0e41b381021f7a4 274 ProSitePatterns PS00893 Nudix box signature. 180 201 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 P40_10790 aa82669dad81eb8dd0e41b381021f7a4 274 SUPERFAMILY SSF55811 99 269 5.28E-44 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 P40_10790 aa82669dad81eb8dd0e41b381021f7a4 274 Gene3D G3DSA:3.90.79.10 147 273 3.7E-40 T 13-10-2018 P40_02520 ae866f6468e0046e42f8e02339f9faa2 284 Gene3D G3DSA:3.55.30.10 1 171 1.2E-60 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 P40_02520 ae866f6468e0046e42f8e02339f9faa2 284 Gene3D G3DSA:1.10.287.480 177 224 1.5E-13 T 13-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily P40_02520 ae866f6468e0046e42f8e02339f9faa2 284 PIRSF PIRSF005261 1 284 2.4E-75 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 P40_02520 ae866f6468e0046e42f8e02339f9faa2 284 SUPERFAMILY SSF118352 223 281 2.35E-18 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 P40_02520 ae866f6468e0046e42f8e02339f9faa2 284 Pfam PF01430 Hsp33 protein 3 272 2.4E-80 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 P40_02520 ae866f6468e0046e42f8e02339f9faa2 284 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 283 29.249 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 P40_02520 ae866f6468e0046e42f8e02339f9faa2 284 Gene3D G3DSA:3.90.1280.10 225 283 1.4E-21 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 P40_02520 ae866f6468e0046e42f8e02339f9faa2 284 SUPERFAMILY SSF64397 3 231 1.96E-64 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 P40_05670 053ddf29aee86cc7eed29eb6c943cc38 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site P40_05670 053ddf29aee86cc7eed29eb6c943cc38 404 Gene3D G3DSA:3.40.640.10 36 295 3.0E-170 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_05670 053ddf29aee86cc7eed29eb6c943cc38 404 Pfam PF00266 Aminotransferase class-V 25 393 1.5E-143 T 13-10-2018 IPR000192 Aminotransferase class V domain P40_05670 053ddf29aee86cc7eed29eb6c943cc38 404 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 404 4.7E-170 T 13-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 P40_05670 053ddf29aee86cc7eed29eb6c943cc38 404 PIRSF PIRSF005572 22 402 9.6E-51 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 P40_05670 053ddf29aee86cc7eed29eb6c943cc38 404 SUPERFAMILY SSF53383 4 400 5.5E-127 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_05670 053ddf29aee86cc7eed29eb6c943cc38 404 Gene3D G3DSA:3.90.1150.10 9 397 3.0E-170 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_19700 1ae23b0fe85d06317b55204c551dfba7 426 PIRSF PIRSF006066 4 426 5.3E-141 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_19700 1ae23b0fe85d06317b55204c551dfba7 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 416 2.8E-101 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_19700 1ae23b0fe85d06317b55204c551dfba7 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 19 422 3.6E-125 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_07235 da65f30b524043bfc8f6882702585837 176 Gene3D G3DSA:3.40.30.10 18 172 6.4E-39 T 13-10-2018 P40_07235 da65f30b524043bfc8f6882702585837 176 ProSitePatterns PS00194 Thioredoxin family active site. 63 81 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 P40_07235 da65f30b524043bfc8f6882702585837 176 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 5 168 8.9E-56 T 13-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 P40_07235 da65f30b524043bfc8f6882702585837 176 Pfam PF08534 Redoxin 33 157 9.4E-15 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 P40_07235 da65f30b524043bfc8f6882702585837 176 SUPERFAMILY SSF52833 38 169 6.25E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_14785 43d18f2e246d1385691c415c992f3a48 785 SUPERFAMILY SSF81653 277 367 2.62E-25 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 P40_14785 43d18f2e246d1385691c415c992f3a48 785 SUPERFAMILY SSF81665 208 463 5.1E-13 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 P40_14785 43d18f2e246d1385691c415c992f3a48 785 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 175 778 9.0E-184 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 SUPERFAMILY SSF47240 24 67 2.65E-9 T 13-10-2018 IPR009078 Ferritin-like superfamily P40_14785 43d18f2e246d1385691c415c992f3a48 785 Pfam PF00702 haloacid dehalogenase-like hydrolase 465 682 3.1E-38 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 SUPERFAMILY SSF56784 467 775 4.07E-61 T 13-10-2018 IPR036412 HAD-like superfamily P40_14785 43d18f2e246d1385691c415c992f3a48 785 Gene3D G3DSA:2.70.150.20 260 372 4.4E-42 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 238 746 9.4E-88 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 P40_14785 43d18f2e246d1385691c415c992f3a48 785 Gene3D G3DSA:1.10.620.20 9 84 3.8E-9 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 P40_14785 43d18f2e246d1385691c415c992f3a48 785 Pfam PF04945 YHS domain 24 67 3.8E-19 T 13-10-2018 IPR007029 YHS domain P40_14785 43d18f2e246d1385691c415c992f3a48 785 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 193 777 2.1E-192 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 P40_14785 43d18f2e246d1385691c415c992f3a48 785 PRINTS PR00943 Copper-transporting ATPase signature 178 197 1.9E-17 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 PRINTS PR00943 Copper-transporting ATPase signature 452 467 1.9E-17 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 PRINTS PR00943 Copper-transporting ATPase signature 390 404 1.9E-17 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 PRINTS PR00943 Copper-transporting ATPase signature 645 662 1.9E-17 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 PRINTS PR00943 Copper-transporting ATPase signature 236 255 1.9E-17 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 PRINTS PR00943 Copper-transporting ATPase signature 256 274 1.9E-17 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 Pfam PF00122 E1-E2 ATPase 267 448 2.3E-55 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 234 777 6.0E-119 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 Gene3D G3DSA:3.40.50.1000 450 719 1.6E-90 T 13-10-2018 IPR023214 HAD superfamily P40_14785 43d18f2e246d1385691c415c992f3a48 785 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 471 477 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 P40_14785 43d18f2e246d1385691c415c992f3a48 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 691 703 3.5E-27 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 668 687 3.5E-27 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 593 604 3.5E-27 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 615 625 3.5E-27 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 317 331 3.5E-27 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 483 3.5E-27 T 13-10-2018 P40_14785 43d18f2e246d1385691c415c992f3a48 785 Gene3D G3DSA:3.40.1110.10 480 600 1.6E-90 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 P40_14785 43d18f2e246d1385691c415c992f3a48 785 SMART SM00746 25 63 8.0E-9 T 13-10-2018 IPR011017 TRASH domain P40_01065 38e8711465f06f7b58d90c11640ee9fe 269 Gene3D G3DSA:3.20.190.10 2 128 1.3E-41 T 13-10-2018 IPR035937 MutM-like, N-terminal P40_01065 38e8711465f06f7b58d90c11640ee9fe 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 1.2E-6 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 P40_01065 38e8711465f06f7b58d90c11640ee9fe 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.7E-35 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 P40_01065 38e8711465f06f7b58d90c11640ee9fe 269 SMART SM00898 2 115 1.3E-53 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 P40_01065 38e8711465f06f7b58d90c11640ee9fe 269 SUPERFAMILY SSF81624 2 138 1.44E-41 T 13-10-2018 IPR035937 MutM-like, N-terminal P40_01065 38e8711465f06f7b58d90c11640ee9fe 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.7E-24 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 P40_01065 38e8711465f06f7b58d90c11640ee9fe 269 SUPERFAMILY SSF57716 217 268 2.33E-16 T 13-10-2018 P40_01065 38e8711465f06f7b58d90c11640ee9fe 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.714 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 P40_01065 38e8711465f06f7b58d90c11640ee9fe 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.9E-90 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 P40_01065 38e8711465f06f7b58d90c11640ee9fe 269 SUPERFAMILY SSF46946 130 221 2.21E-29 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 P40_01065 38e8711465f06f7b58d90c11640ee9fe 269 Gene3D G3DSA:1.10.8.50 139 269 4.4E-46 T 13-10-2018 P40_01065 38e8711465f06f7b58d90c11640ee9fe 269 SMART SM01232 129 221 3.8E-49 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 P40_00025 16c7a47091ec539a947dbfbbff54591a 121 Pfam PF00816 H-NS histone family 12 115 2.6E-23 T 13-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 P40_00025 16c7a47091ec539a947dbfbbff54591a 121 SMART SM00528 76 121 4.2E-14 T 13-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 P40_00025 16c7a47091ec539a947dbfbbff54591a 121 SUPERFAMILY SSF81273 79 121 2.43E-12 T 13-10-2018 P40_00025 16c7a47091ec539a947dbfbbff54591a 121 Gene3D G3DSA:4.10.430.10 68 121 6.7E-17 T 13-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 P40_17375 24d548d994cc8edd9fde988a3b3a665e 111 Gene3D G3DSA:1.20.120.20 6 98 9.3E-9 T 13-10-2018 P40_17375 24d548d994cc8edd9fde988a3b3a665e 111 SUPERFAMILY SSF47162 35 86 1.44E-7 T 13-10-2018 P40_02835 238c8ae42e11624849f86ffb7594405b 68 Pfam PF05532 CsbD-like 5 56 8.0E-19 T 13-10-2018 IPR008462 CsbD-like domain P40_02835 238c8ae42e11624849f86ffb7594405b 68 SUPERFAMILY SSF69047 1 66 1.28E-25 T 13-10-2018 IPR036629 YjbJ superfamily P40_02835 238c8ae42e11624849f86ffb7594405b 68 PIRSF PIRSF039008 1 66 6.0E-32 T 13-10-2018 IPR026042 Stress response protein YjbJ P40_02835 238c8ae42e11624849f86ffb7594405b 68 Gene3D G3DSA:1.10.1470.10 1 65 3.4E-29 T 13-10-2018 IPR036629 YjbJ superfamily P40_13060 6f584ecf45d0e1f2059c4a5198b42850 309 Pfam PF01012 Electron transfer flavoprotein domain 3 170 6.3E-43 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 P40_13060 6f584ecf45d0e1f2059c4a5198b42850 309 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 13-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 P40_13060 6f584ecf45d0e1f2059c4a5198b42850 309 PIRSF PIRSF000089 1 309 9.2E-109 T 13-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 P40_13060 6f584ecf45d0e1f2059c4a5198b42850 309 SUPERFAMILY SSF52467 187 308 3.07E-48 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily P40_13060 6f584ecf45d0e1f2059c4a5198b42850 309 SUPERFAMILY SSF52402 2 184 4.1E-60 T 13-10-2018 P40_13060 6f584ecf45d0e1f2059c4a5198b42850 309 Gene3D G3DSA:3.40.50.620 2 183 9.5E-59 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_13060 6f584ecf45d0e1f2059c4a5198b42850 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 272 2.3E-36 T 13-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 P40_13060 6f584ecf45d0e1f2059c4a5198b42850 309 Gene3D G3DSA:3.40.50.1220 184 309 1.6E-57 T 13-10-2018 P40_13060 6f584ecf45d0e1f2059c4a5198b42850 309 SMART SM00893 3 182 3.7E-59 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 P40_00880 53e812ebe348a7381f04ddc6daf22aad 1186 Pfam PF13289 SIR2-like domain 119 255 2.1E-18 T 13-10-2018 IPR039444 SIR2-like domain P40_00880 53e812ebe348a7381f04ddc6daf22aad 1186 SUPERFAMILY SSF52467 30 171 1.96E-5 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily P40_05070 5934b08f8519d1b2f0f92e3af3840de9 222 PIRSF PIRSF016262 1 208 4.8E-56 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 P40_05070 5934b08f8519d1b2f0f92e3af3840de9 222 Hamap MF_00013 Octanoyltransferase [lipB]. 2 203 35.2 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 P40_05070 5934b08f8519d1b2f0f92e3af3840de9 222 Pfam PF03099 Biotin/lipoate A/B protein ligase family 56 153 1.3E-7 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 P40_05070 5934b08f8519d1b2f0f92e3af3840de9 222 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 68 83 - T 13-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 P40_05070 5934b08f8519d1b2f0f92e3af3840de9 222 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 24 197 3.8E-57 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 P40_05070 5934b08f8519d1b2f0f92e3af3840de9 222 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 72 125 3.0E-12 T 13-10-2018 P40_05070 5934b08f8519d1b2f0f92e3af3840de9 222 Gene3D G3DSA:3.30.930.10 1 201 2.4E-60 T 13-10-2018 P40_05070 5934b08f8519d1b2f0f92e3af3840de9 222 SUPERFAMILY SSF55681 1 203 1.82E-64 T 13-10-2018 P40_17245 884d9280855a7cec3a32a4b0b610aa53 107 Pfam PF02699 Preprotein translocase subunit 22 96 9.0E-31 T 13-10-2018 IPR003849 Preprotein translocase YajC P40_17245 884d9280855a7cec3a32a4b0b610aa53 107 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 3.0E-16 T 13-10-2018 IPR003849 Preprotein translocase YajC P40_17245 884d9280855a7cec3a32a4b0b610aa53 107 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 3.0E-16 T 13-10-2018 IPR003849 Preprotein translocase YajC P40_17245 884d9280855a7cec3a32a4b0b610aa53 107 SMART SM01323 17 99 2.0E-42 T 13-10-2018 IPR003849 Preprotein translocase YajC P40_17245 884d9280855a7cec3a32a4b0b610aa53 107 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 99 1.2E-31 T 13-10-2018 IPR003849 Preprotein translocase YajC P40_07030 5b7a3e0405f1ee98b3d4fba515ba82cf 565 Gene3D G3DSA:3.90.1640.30 50 317 2.0E-83 T 13-10-2018 P40_07030 5b7a3e0405f1ee98b3d4fba515ba82cf 565 Gene3D G3DSA:3.10.310.30 319 447 7.2E-30 T 13-10-2018 P40_07030 5b7a3e0405f1ee98b3d4fba515ba82cf 565 Pfam PF01368 DHH family 74 176 5.6E-8 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 P40_07030 5b7a3e0405f1ee98b3d4fba515ba82cf 565 SUPERFAMILY SSF64182 48 453 2.88E-110 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily P40_07030 5b7a3e0405f1ee98b3d4fba515ba82cf 565 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 559 8.6E-139 T 13-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 P40_07030 5b7a3e0405f1ee98b3d4fba515ba82cf 565 Pfam PF02272 DHHA1 domain 314 442 2.4E-18 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 P40_14000 84bea1229a4aed63630b7506b3ebd94c 180 SUPERFAMILY SSF46785 2 173 1.36E-40 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_14000 84bea1229a4aed63630b7506b3ebd94c 180 Pfam PF10400 Virulence activator alpha C-term 92 173 1.5E-19 T 13-10-2018 IPR018309 Transcription regulator PadR, C-terminal P40_14000 84bea1229a4aed63630b7506b3ebd94c 180 Gene3D G3DSA:1.10.10.10 1 88 7.5E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14000 84bea1229a4aed63630b7506b3ebd94c 180 Pfam PF03551 Transcriptional regulator PadR-like family 7 79 9.7E-13 T 13-10-2018 IPR005149 Transcription regulator PadR, N-terminal P40_03505 0722aa07356161b9366484cc9e86e43a 371 Pfam PF02653 Branched-chain amino acid transport system / permease component 63 337 1.3E-32 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_19855 e9c0880f07f728b456696620154ef199 1047 Gene3D G3DSA:1.20.1640.10 529 1034 4.9E-288 T 13-10-2018 P40_19855 e9c0880f07f728b456696620154ef199 1047 Gene3D G3DSA:3.30.70.1320 136 344 4.9E-288 T 13-10-2018 P40_19855 e9c0880f07f728b456696620154ef199 1047 SUPERFAMILY SSF82866 308 515 3.79E-43 T 13-10-2018 P40_19855 e9c0880f07f728b456696620154ef199 1047 SUPERFAMILY SSF82693 43 129 1.6E-21 T 13-10-2018 P40_19855 e9c0880f07f728b456696620154ef199 1047 SUPERFAMILY SSF82693 576 675 1.36E-6 T 13-10-2018 P40_19855 e9c0880f07f728b456696620154ef199 1047 Gene3D G3DSA:3.30.70.1430 576 676 4.9E-288 T 13-10-2018 P40_19855 e9c0880f07f728b456696620154ef199 1047 Gene3D G3DSA:3.30.70.1430 42 827 4.9E-288 T 13-10-2018 P40_19855 e9c0880f07f728b456696620154ef199 1047 SUPERFAMILY SSF82714 733 817 1.27E-19 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_19855 e9c0880f07f728b456696620154ef199 1047 Gene3D G3DSA:3.30.70.1440 677 877 4.9E-288 T 13-10-2018 P40_19855 e9c0880f07f728b456696620154ef199 1047 SUPERFAMILY SSF82693 143 341 9.42E-14 T 13-10-2018 P40_19855 e9c0880f07f728b456696620154ef199 1047 SUPERFAMILY SSF82714 187 273 7.06E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_19855 e9c0880f07f728b456696620154ef199 1047 Gene3D G3DSA:1.20.1640.10 15 528 4.9E-288 T 13-10-2018 P40_19855 e9c0880f07f728b456696620154ef199 1047 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1043 0.0 T 13-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 P40_19855 e9c0880f07f728b456696620154ef199 1047 Gene3D G3DSA:3.30.2090.10 183 277 4.9E-288 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_19855 e9c0880f07f728b456696620154ef199 1047 SUPERFAMILY SSF82866 815 1042 3.14E-56 T 13-10-2018 P40_19855 e9c0880f07f728b456696620154ef199 1047 Pfam PF00873 AcrB/AcrD/AcrF family 13 1037 2.1E-278 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_19855 e9c0880f07f728b456696620154ef199 1047 Gene3D G3DSA:3.30.2090.10 731 819 4.9E-288 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_19855 e9c0880f07f728b456696620154ef199 1047 PRINTS PR00702 Acriflavin resistance protein family signature 348 371 4.1E-19 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_19855 e9c0880f07f728b456696620154ef199 1047 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 4.1E-19 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_19855 e9c0880f07f728b456696620154ef199 1047 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 4.1E-19 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_19855 e9c0880f07f728b456696620154ef199 1047 PRINTS PR00702 Acriflavin resistance protein family signature 375 396 4.1E-19 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_14195 fe5017b25393fee45c24f3f8b3895704 526 PIRSF PIRSF006446 359 524 6.3E-34 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 P40_14195 fe5017b25393fee45c24f3f8b3895704 526 PIRSF PIRSF006446 2 326 3.5E-112 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 P40_14195 fe5017b25393fee45c24f3f8b3895704 526 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 502 1.9E-177 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 P40_02015 ac8bc865b2bde139bb6dcaa8101a15b9 296 Pfam PF04228 Putative neutral zinc metallopeptidase 1 294 2.6E-119 T 13-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative P40_18870 41823251876a8ab9dbb7146c5f9cfb4a 374 Gene3D G3DSA:3.40.50.300 4 222 9.6E-64 T 13-10-2018 P40_18870 41823251876a8ab9dbb7146c5f9cfb4a 374 Gene3D G3DSA:2.40.50.140 292 353 1.0E-23 T 13-10-2018 P40_18870 41823251876a8ab9dbb7146c5f9cfb4a 374 SMART SM00382 29 212 1.0E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_18870 41823251876a8ab9dbb7146c5f9cfb4a 374 Gene3D G3DSA:2.40.50.940 223 361 1.0E-23 T 13-10-2018 P40_18870 41823251876a8ab9dbb7146c5f9cfb4a 374 SUPERFAMILY SSF52540 4 243 1.68E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18870 41823251876a8ab9dbb7146c5f9cfb4a 374 SUPERFAMILY SSF50331 238 369 4.16E-19 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal P40_18870 41823251876a8ab9dbb7146c5f9cfb4a 374 Pfam PF08402 TOBE domain 285 361 2.0E-6 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 P40_18870 41823251876a8ab9dbb7146c5f9cfb4a 374 Pfam PF00005 ABC transporter 23 162 6.6E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_12790 0e3a4cb13039b1ce715966e8945f03f0 262 Gene3D G3DSA:3.30.70.580 1 106 1.4E-39 T 13-10-2018 P40_12790 0e3a4cb13039b1ce715966e8945f03f0 262 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 33.958 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_12790 0e3a4cb13039b1ce715966e8945f03f0 262 Pfam PF01416 tRNA pseudouridine synthase 144 246 1.3E-28 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_12790 0e3a4cb13039b1ce715966e8945f03f0 262 Pfam PF01416 tRNA pseudouridine synthase 7 104 2.9E-9 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_12790 0e3a4cb13039b1ce715966e8945f03f0 262 PIRSF PIRSF001430 1 257 4.4E-77 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_12790 0e3a4cb13039b1ce715966e8945f03f0 262 Gene3D G3DSA:3.30.70.660 108 244 2.1E-47 T 13-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 P40_12790 0e3a4cb13039b1ce715966e8945f03f0 262 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 240 1.9E-63 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_12790 0e3a4cb13039b1ce715966e8945f03f0 262 SUPERFAMILY SSF55120 1 256 6.76E-91 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_06205 479595748f3f7c4c5d164962d942327e 318 SUPERFAMILY SSF52317 1 191 1.1E-46 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_06205 479595748f3f7c4c5d164962d942327e 318 Pfam PF12833 Helix-turn-helix domain 231 310 4.7E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_06205 479595748f3f7c4c5d164962d942327e 318 SUPERFAMILY SSF46689 208 256 1.61E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06205 479595748f3f7c4c5d164962d942327e 318 Pfam PF01965 DJ-1/PfpI family 2 171 4.8E-26 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 P40_06205 479595748f3f7c4c5d164962d942327e 318 Gene3D G3DSA:1.10.10.60 208 315 7.5E-26 T 13-10-2018 P40_06205 479595748f3f7c4c5d164962d942327e 318 Gene3D G3DSA:3.40.50.880 1 199 4.4E-61 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_06205 479595748f3f7c4c5d164962d942327e 318 SUPERFAMILY SSF46689 261 312 2.24E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06205 479595748f3f7c4c5d164962d942327e 318 SMART SM00342 225 308 1.1E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_20125 f2303d88fbe971c817838bad84a68a37 254 SMART SM00382 28 215 2.6E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_20125 f2303d88fbe971c817838bad84a68a37 254 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_20125 f2303d88fbe971c817838bad84a68a37 254 SUPERFAMILY SSF52540 16 223 1.25E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_20125 f2303d88fbe971c817838bad84a68a37 254 Pfam PF00005 ABC transporter 22 168 1.5E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_20125 f2303d88fbe971c817838bad84a68a37 254 Gene3D G3DSA:3.40.50.300 4 250 4.5E-63 T 13-10-2018 P40_09315 100d225ffbf7600ae28f194720597074 288 PIRSF PIRSF006221 9 288 6.1E-64 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 P40_09315 100d225ffbf7600ae28f194720597074 288 SUPERFAMILY SSF56112 5 285 9.48E-33 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_09315 100d225ffbf7600ae28f194720597074 288 Pfam PF03881 Fructosamine kinase 37 286 7.8E-64 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 P40_09315 100d225ffbf7600ae28f194720597074 288 Gene3D G3DSA:3.90.1200.10 97 288 1.7E-54 T 13-10-2018 P40_16150 e4a78f06302d691fedf2deed2f97e83b 221 Gene3D G3DSA:2.30.30.760 163 221 1.7E-10 T 13-10-2018 P40_16150 e4a78f06302d691fedf2deed2f97e83b 221 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 87 219 5.1E-34 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal P40_16150 e4a78f06302d691fedf2deed2f97e83b 221 Pfam PF13144 Chaperone for flagella basal body P-ring formation 26 219 5.1E-38 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal P40_16150 e4a78f06302d691fedf2deed2f97e83b 221 SMART SM00858 97 159 6.2E-11 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 P40_20525 26d6a2040afe311d3b369e3c1f1f8bb6 265 Gene3D G3DSA:1.10.12.10 213 265 1.7E-16 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_20525 26d6a2040afe311d3b369e3c1f1f8bb6 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 264 3.4E-63 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_20525 26d6a2040afe311d3b369e3c1f1f8bb6 265 SUPERFAMILY SSF52096 2 265 3.95E-75 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_20525 26d6a2040afe311d3b369e3c1f1f8bb6 265 Gene3D G3DSA:3.90.226.10 1 208 1.6E-59 T 13-10-2018 P40_15345 78b26e3d62cb8b74359424d2fbc3958b 437 Pfam PF00268 Ribonucleotide reductase, small chain 117 404 7.1E-85 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P40_15345 78b26e3d62cb8b74359424d2fbc3958b 437 SUPERFAMILY SSF47240 100 429 3.91E-97 T 13-10-2018 IPR009078 Ferritin-like superfamily P40_15345 78b26e3d62cb8b74359424d2fbc3958b 437 Gene3D G3DSA:1.10.620.20 97 429 1.4E-111 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 P40_15345 78b26e3d62cb8b74359424d2fbc3958b 437 PIRSF PIRSF000355 86 437 7.8E-147 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P40_07875 e9a396435f409d3fc5ce731dbe8996e7 77 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 45 1.1E-7 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 P40_07875 e9a396435f409d3fc5ce731dbe8996e7 77 SUPERFAMILY SSF89447 5 67 5.75E-12 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily P40_07875 e9a396435f409d3fc5ce731dbe8996e7 77 Gene3D G3DSA:2.10.260.10 2 77 6.1E-24 T 13-10-2018 P40_07875 e9a396435f409d3fc5ce731dbe8996e7 77 SMART SM00966 8 48 1.4E-4 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 P40_00075 7828a7f2ae44a9408d5c047ee242f99d 335 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 12 292 2.6E-149 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00075 7828a7f2ae44a9408d5c047ee242f99d 335 Gene3D G3DSA:3.30.930.10 1 217 1.9E-111 T 13-10-2018 P40_00075 7828a7f2ae44a9408d5c047ee242f99d 335 Gene3D G3DSA:1.20.58.180 218 299 2.0E-33 T 13-10-2018 P40_00075 7828a7f2ae44a9408d5c047ee242f99d 335 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 4.3E-70 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00075 7828a7f2ae44a9408d5c047ee242f99d 335 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 64 79 4.3E-70 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00075 7828a7f2ae44a9408d5c047ee242f99d 335 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 116 140 4.3E-70 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00075 7828a7f2ae44a9408d5c047ee242f99d 335 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 165 180 4.3E-70 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00075 7828a7f2ae44a9408d5c047ee242f99d 335 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 142 162 4.3E-70 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00075 7828a7f2ae44a9408d5c047ee242f99d 335 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 85 105 4.3E-70 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00075 7828a7f2ae44a9408d5c047ee242f99d 335 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 300 8.9E-164 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00075 7828a7f2ae44a9408d5c047ee242f99d 335 SUPERFAMILY SSF55681 10 292 7.95E-135 T 13-10-2018 P40_00075 7828a7f2ae44a9408d5c047ee242f99d 335 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 10 294 60.941 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_17495 82376f5eba8889f5df3261424257f9f9 951 Gene3D G3DSA:3.40.50.300 718 904 3.4E-15 T 13-10-2018 P40_17495 82376f5eba8889f5df3261424257f9f9 951 Gene3D G3DSA:3.40.50.300 499 582 4.1E-9 T 13-10-2018 P40_17495 82376f5eba8889f5df3261424257f9f9 951 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 52 947 0.0 T 13-10-2018 IPR022303 Conjugative transfer ATPase P40_17495 82376f5eba8889f5df3261424257f9f9 951 SMART SM00382 521 781 5.0E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_17495 82376f5eba8889f5df3261424257f9f9 951 SUPERFAMILY SSF52540 475 871 3.03E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_17495 82376f5eba8889f5df3261424257f9f9 951 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 62 327 1.6E-69 T 13-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 Gene3D G3DSA:1.25.40.10 819 932 2.6E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 Gene3D G3DSA:1.25.40.10 469 630 1.1E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SUPERFAMILY SSF48452 649 930 2.78E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SUPERFAMILY SSF48452 510 656 1.33E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 Pfam PF13432 Tetratricopeptide repeat 842 902 5.5E-6 T 13-10-2018 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 Pfam PF13432 Tetratricopeptide repeat 975 1037 0.011 T 13-10-2018 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 Pfam PF13432 Tetratricopeptide repeat 226 283 0.018 T 13-10-2018 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SUPERFAMILY SSF48452 1149 1361 1.18E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SMART SM00028 667 700 2.3 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SMART SM00028 971 1004 180.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SMART SM00028 734 767 27.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SMART SM00028 869 902 320.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SMART SM00028 117 150 150.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SMART SM00028 598 631 430.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SMART SM00028 1039 1072 200.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SMART SM00028 218 251 48.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SMART SM00028 1005 1038 54.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SMART SM00028 835 868 13.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 Gene3D G3DSA:1.25.40.10 634 805 1.1E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SUPERFAMILY SSF48452 833 1132 4.85E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 SUPERFAMILY SSF48452 42 171 2.74E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 Pfam PF12385 Papain-like cysteine protease AvrRpt2 312 423 4.5E-4 T 13-10-2018 IPR022118 Peptidase C70, AvrRpt2 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 Gene3D G3DSA:1.25.40.10 1232 1420 1.2E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 Gene3D G3DSA:1.25.40.10 6 306 2.6E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05460 b499022ef8df4837d8d4afc60e8280b1 1515 Gene3D G3DSA:1.25.40.10 941 1231 1.1E-31 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_19120 c818596aca14950437a1868645e724af 224 Gene3D G3DSA:1.10.3810.10 36 216 6.5E-57 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_19120 c818596aca14950437a1868645e724af 224 SUPERFAMILY SSF53955 47 215 6.19E-61 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily P40_19120 c818596aca14950437a1868645e724af 224 Pfam PF00912 Transglycosylase 51 215 2.2E-55 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_19120 c818596aca14950437a1868645e724af 224 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 12 217 3.5E-81 T 13-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_19120 c818596aca14950437a1868645e724af 224 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 4 221 37.206 T 13-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_02795 19f6cd4c6697e8e071eceb8353d9bba4 309 Gene3D G3DSA:3.30.70.640 1 147 1.3E-48 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 P40_02795 19f6cd4c6697e8e071eceb8353d9bba4 309 Pfam PF00994 Probable molybdopterin binding domain 151 291 4.0E-28 T 13-10-2018 IPR001453 MoaB/Mog domain P40_02795 19f6cd4c6697e8e071eceb8353d9bba4 309 PIRSF PIRSF036594 1 305 2.3E-79 T 13-10-2018 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823 P40_02795 19f6cd4c6697e8e071eceb8353d9bba4 309 Gene3D G3DSA:3.40.980.10 148 304 8.1E-43 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily P40_02795 19f6cd4c6697e8e071eceb8353d9bba4 309 SUPERFAMILY SSF55040 2 139 5.49E-44 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 P40_02795 19f6cd4c6697e8e071eceb8353d9bba4 309 Pfam PF01967 MoaC family 2 136 6.1E-42 T 13-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 P40_02795 19f6cd4c6697e8e071eceb8353d9bba4 309 SMART SM00852 151 294 1.9E-17 T 13-10-2018 IPR001453 MoaB/Mog domain P40_02795 19f6cd4c6697e8e071eceb8353d9bba4 309 SUPERFAMILY SSF53218 147 298 2.22E-36 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily P40_02795 19f6cd4c6697e8e071eceb8353d9bba4 309 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 148 288 1.3E-25 T 13-10-2018 IPR001453 MoaB/Mog domain P40_02795 19f6cd4c6697e8e071eceb8353d9bba4 309 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 138 1.5E-42 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 P40_11560 ce7dc4283ad6c37cbf0769867c9299d7 310 Gene3D G3DSA:1.10.10.10 2 83 9.8E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_11560 ce7dc4283ad6c37cbf0769867c9299d7 310 SUPERFAMILY SSF46785 2 77 3.82E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_11560 ce7dc4283ad6c37cbf0769867c9299d7 310 SUPERFAMILY SSF53850 89 303 2.92E-20 T 13-10-2018 P40_11560 ce7dc4283ad6c37cbf0769867c9299d7 310 Gene3D G3DSA:3.40.190.10 94 295 5.8E-14 T 13-10-2018 P40_11560 ce7dc4283ad6c37cbf0769867c9299d7 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.8E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11560 ce7dc4283ad6c37cbf0769867c9299d7 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.8E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11560 ce7dc4283ad6c37cbf0769867c9299d7 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.8E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11560 ce7dc4283ad6c37cbf0769867c9299d7 310 Gene3D G3DSA:3.40.190.10 170 277 5.8E-14 T 13-10-2018 P40_11560 ce7dc4283ad6c37cbf0769867c9299d7 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.7E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11560 ce7dc4283ad6c37cbf0769867c9299d7 310 Pfam PF03466 LysR substrate binding domain 88 302 1.7E-19 T 13-10-2018 IPR005119 LysR, substrate-binding P40_04015 f20b6349eb7be2d0eaf284f1860fd1dd 213 SMART SM00448 2 115 2.9E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04015 f20b6349eb7be2d0eaf284f1860fd1dd 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.3E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04015 f20b6349eb7be2d0eaf284f1860fd1dd 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.3E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04015 f20b6349eb7be2d0eaf284f1860fd1dd 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.3E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04015 f20b6349eb7be2d0eaf284f1860fd1dd 213 Gene3D G3DSA:3.40.50.2300 1 103 5.3E-18 T 13-10-2018 P40_04015 f20b6349eb7be2d0eaf284f1860fd1dd 213 Pfam PF00072 Response regulator receiver domain 5 115 5.7E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04015 f20b6349eb7be2d0eaf284f1860fd1dd 213 SMART SM00421 146 203 6.1E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04015 f20b6349eb7be2d0eaf284f1860fd1dd 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 201 1.5E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_04015 f20b6349eb7be2d0eaf284f1860fd1dd 213 SUPERFAMILY SSF46894 134 210 4.08E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_04015 f20b6349eb7be2d0eaf284f1860fd1dd 213 Gene3D G3DSA:1.10.10.10 104 212 2.4E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_04015 f20b6349eb7be2d0eaf284f1860fd1dd 213 SUPERFAMILY SSF52172 1 134 4.27E-26 T 13-10-2018 IPR011006 CheY-like superfamily P40_15860 cf3ba3ef5cdcb7b79b812ba72d4fab09 322 Pfam PF03060 Nitronate monooxygenase 83 303 9.9E-25 T 13-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 P40_15860 cf3ba3ef5cdcb7b79b812ba72d4fab09 322 Gene3D G3DSA:3.20.20.70 8 314 4.4E-64 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_15860 cf3ba3ef5cdcb7b79b812ba72d4fab09 322 SUPERFAMILY SSF51412 8 257 1.14E-46 T 13-10-2018 P40_17040 56f67466351750771dc1b07c13089e58 253 Gene3D G3DSA:3.40.50.720 2 249 5.6E-85 T 13-10-2018 P40_17040 56f67466351750771dc1b07c13089e58 253 SUPERFAMILY SSF69572 2 245 1.57E-75 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 P40_17040 56f67466351750771dc1b07c13089e58 253 Pfam PF00899 ThiF family 10 241 7.0E-58 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 P40_14030 31fafcaf4b5db9bac7ddc70ab94c3de5 418 Pfam PF02687 FtsX-like permease family 316 408 2.5E-9 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 P40_14030 31fafcaf4b5db9bac7ddc70ab94c3de5 418 Pfam PF12704 MacB-like periplasmic core domain 18 205 1.0E-10 T 13-10-2018 IPR025857 MacB-like periplasmic core domain P40_04010 f66c25ab06b5461288c82c5ae1e62124 736 Gene3D G3DSA:3.30.565.10 589 724 6.1E-13 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_04010 f66c25ab06b5461288c82c5ae1e62124 736 SUPERFAMILY SSF55874 590 716 2.06E-5 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_03290 cd86c8760890a0894906c0608faf031a 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 373 382 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site P40_03290 cd86c8760890a0894906c0608faf031a 470 Pfam PF02954 Bacterial regulatory protein, Fis family 429 469 5.1E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_03290 cd86c8760890a0894906c0608faf031a 470 Pfam PF00158 Sigma-54 interaction domain 161 327 1.1E-65 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 P40_03290 cd86c8760890a0894906c0608faf031a 470 Gene3D G3DSA:3.40.50.300 146 331 3.5E-64 T 13-10-2018 P40_03290 cd86c8760890a0894906c0608faf031a 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 184 197 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 P40_03290 cd86c8760890a0894906c0608faf031a 470 SMART SM00382 180 325 4.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_03290 cd86c8760890a0894906c0608faf031a 470 SUPERFAMILY SSF55785 24 115 4.19E-9 T 13-10-2018 IPR035965 PAS domain superfamily P40_03290 cd86c8760890a0894906c0608faf031a 470 Gene3D G3DSA:1.10.10.60 409 470 1.5E-13 T 13-10-2018 P40_03290 cd86c8760890a0894906c0608faf031a 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 435 452 1.1E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_03290 cd86c8760890a0894906c0608faf031a 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 452 470 1.1E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_03290 cd86c8760890a0894906c0608faf031a 470 SUPERFAMILY SSF52540 159 391 1.04E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03290 cd86c8760890a0894906c0608faf031a 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 247 262 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 P40_03290 cd86c8760890a0894906c0608faf031a 470 SUPERFAMILY SSF46689 373 469 3.58E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_03290 cd86c8760890a0894906c0608faf031a 470 Pfam PF08448 PAS fold 25 117 4.6E-5 T 13-10-2018 IPR013656 PAS fold-4 P40_03290 cd86c8760890a0894906c0608faf031a 470 Gene3D G3DSA:3.30.450.20 15 120 6.1E-10 T 13-10-2018 P40_03290 cd86c8760890a0894906c0608faf031a 470 Gene3D G3DSA:1.10.8.60 332 406 1.1E-15 T 13-10-2018 P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 Gene3D G3DSA:3.40.50.2300 7 122 7.4E-29 T 13-10-2018 P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 SUPERFAMILY SSF52540 137 379 3.4E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 Pfam PF02954 Bacterial regulatory protein, Fis family 405 445 7.1E-15 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 Gene3D G3DSA:1.10.8.60 308 375 1.5E-21 T 13-10-2018 P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 SUPERFAMILY SSF46689 351 447 8.06E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 Pfam PF00072 Response regulator receiver domain 8 117 6.1E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 Gene3D G3DSA:1.10.10.60 377 450 6.2E-16 T 13-10-2018 P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 Gene3D G3DSA:3.40.50.300 124 307 1.3E-62 T 13-10-2018 P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 Pfam PF00158 Sigma-54 interaction domain 137 302 5.7E-68 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 SMART SM00448 6 117 9.4E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 SUPERFAMILY SSF52172 6 180 2.13E-37 T 13-10-2018 IPR011006 CheY-like superfamily P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 SMART SM00382 157 300 1.5E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 428 2.0E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_17855 0282d9e40102e2c90c76629a69f0d6ac 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 448 2.0E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_07090 a80106fe85c0d6e02cef1f12725ca436 194 Pfam PF08281 Sigma-70, region 4 128 177 7.1E-18 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_07090 a80106fe85c0d6e02cef1f12725ca436 194 SUPERFAMILY SSF88659 119 180 1.2E-16 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_07090 a80106fe85c0d6e02cef1f12725ca436 194 Pfam PF04542 Sigma-70 region 2 21 88 2.2E-19 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_07090 a80106fe85c0d6e02cef1f12725ca436 194 Gene3D G3DSA:1.10.10.10 118 186 8.5E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_07090 a80106fe85c0d6e02cef1f12725ca436 194 SUPERFAMILY SSF88946 2 103 1.0E-32 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_07090 a80106fe85c0d6e02cef1f12725ca436 194 Gene3D G3DSA:1.10.1740.10 1 117 1.0E-43 T 13-10-2018 P40_07090 a80106fe85c0d6e02cef1f12725ca436 194 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 43 74 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_07090 a80106fe85c0d6e02cef1f12725ca436 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 180 4.9E-31 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_07090 a80106fe85c0d6e02cef1f12725ca436 194 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 186 8.0E-93 T 13-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_08120 e297186d3c83b404a19681af5a239546 419 SUPERFAMILY SSF55205 1 417 5.07E-100 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 P40_08120 e297186d3c83b404a19681af5a239546 419 Gene3D G3DSA:3.65.10.10 6 414 3.0E-121 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 P40_08120 e297186d3c83b404a19681af5a239546 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 408 1.9E-65 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 P40_08120 e297186d3c83b404a19681af5a239546 419 Gene3D G3DSA:3.65.10.10 21 232 3.0E-121 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 P40_18110 3647a4c55bb107b5cca3b6066383d2e0 178 Gene3D G3DSA:1.20.1260.10 23 178 5.1E-53 T 13-10-2018 IPR012347 Ferritin-like P40_18110 3647a4c55bb107b5cca3b6066383d2e0 178 PIRSF PIRSF018063 14 178 8.7E-59 T 13-10-2018 IPR014490 DNA-binding protein from starved cells-like P40_18110 3647a4c55bb107b5cca3b6066383d2e0 178 SUPERFAMILY SSF47240 33 176 1.37E-38 T 13-10-2018 IPR009078 Ferritin-like superfamily P40_18110 3647a4c55bb107b5cca3b6066383d2e0 178 Pfam PF00210 Ferritin-like domain 39 177 4.4E-29 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 P40_21225 72455c37dc4c5bc25d2de61618f3076a 179 Gene3D G3DSA:3.10.640.10 1 179 7.7E-75 T 13-10-2018 IPR038590 YaeQ superfamily P40_21225 72455c37dc4c5bc25d2de61618f3076a 179 SMART SM01322 1 176 1.8E-113 T 13-10-2018 IPR009822 YaeQ P40_21225 72455c37dc4c5bc25d2de61618f3076a 179 PIRSF PIRSF011484 1 178 1.5E-69 T 13-10-2018 IPR009822 YaeQ P40_21225 72455c37dc4c5bc25d2de61618f3076a 179 Pfam PF07152 YaeQ protein 1 173 2.4E-75 T 13-10-2018 IPR009822 YaeQ P40_21225 72455c37dc4c5bc25d2de61618f3076a 179 SUPERFAMILY SSF52980 4 178 1.18E-71 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 P40_01390 24c04b7cced32d22f0ba2e81c213c837 1034 Pfam PF13205 Bacterial Ig-like domain 471 570 7.0E-15 T 13-10-2018 IPR032812 SbsA, Ig-like domain P40_01390 24c04b7cced32d22f0ba2e81c213c837 1034 Pfam PF13205 Bacterial Ig-like domain 35 112 3.0E-8 T 13-10-2018 IPR032812 SbsA, Ig-like domain P40_05555 054f02f0a3356338dc0ab8c60b0f2ba4 256 Pfam PF01738 Dienelactone hydrolase family 37 253 3.1E-47 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 P40_05555 054f02f0a3356338dc0ab8c60b0f2ba4 256 Gene3D G3DSA:3.40.50.1820 19 255 1.8E-56 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_05555 054f02f0a3356338dc0ab8c60b0f2ba4 256 SUPERFAMILY SSF53474 25 253 4.69E-39 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_07830 605aaf20ae87b4a0f8721106ef5f5d2c 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 6.9E-22 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_07830 605aaf20ae87b4a0f8721106ef5f5d2c 398 SUPERFAMILY SSF56645 2 242 3.01E-81 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_07830 605aaf20ae87b4a0f8721106ef5f5d2c 398 Gene3D G3DSA:1.20.140.10 235 398 2.5E-39 T 13-10-2018 P40_07830 605aaf20ae87b4a0f8721106ef5f5d2c 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 120 2.3E-27 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_07830 605aaf20ae87b4a0f8721106ef5f5d2c 398 SUPERFAMILY SSF47203 231 398 1.13E-26 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_07830 605aaf20ae87b4a0f8721106ef5f5d2c 398 Gene3D G3DSA:2.40.110.10 125 234 1.3E-40 T 13-10-2018 P40_07830 605aaf20ae87b4a0f8721106ef5f5d2c 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 395 2.0E-24 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_07830 605aaf20ae87b4a0f8721106ef5f5d2c 398 Gene3D G3DSA:1.10.540.10 2 119 3.3E-33 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_06700 3bb8254b1dad50e99b4a742aba746f20 281 Gene3D G3DSA:3.30.470.10 11 107 3.0E-6 T 13-10-2018 P40_06700 3bb8254b1dad50e99b4a742aba746f20 281 SUPERFAMILY SSF56752 22 251 1.29E-31 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 P40_06700 3bb8254b1dad50e99b4a742aba746f20 281 Pfam PF01063 Amino-transferase class IV 32 244 2.7E-32 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 P40_06700 3bb8254b1dad50e99b4a742aba746f20 281 Gene3D G3DSA:3.20.10.10 121 269 1.1E-18 T 13-10-2018 P40_05000 07d7717b08bec19345af34369c93a290 152 SUPERFAMILY SSF54637 8 147 1.12E-35 T 13-10-2018 IPR029069 HotDog domain superfamily P40_05000 07d7717b08bec19345af34369c93a290 152 Gene3D G3DSA:3.10.129.10 2 150 8.5E-45 T 13-10-2018 P40_05000 07d7717b08bec19345af34369c93a290 152 Pfam PF01575 MaoC like domain 14 119 9.2E-22 T 13-10-2018 IPR002539 MaoC-like dehydratase domain P40_01230 4f0299abe5062a91a34528b2ba052518 283 SUPERFAMILY SSF53474 5 280 2.45E-87 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_01230 4f0299abe5062a91a34528b2ba052518 283 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 280 1.5E-129 T 13-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 P40_01230 4f0299abe5062a91a34528b2ba052518 283 Pfam PF00756 Putative esterase 25 274 3.4E-62 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 P40_01230 4f0299abe5062a91a34528b2ba052518 283 Gene3D G3DSA:3.40.50.1820 5 282 3.4E-95 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_02430 b8cba2a69cc6d24ce41c52865c9a321c 747 Gene3D G3DSA:3.55.50.30 40 111 1.2E-22 T 13-10-2018 P40_02430 b8cba2a69cc6d24ce41c52865c9a321c 747 Pfam PF07660 Secretin and TonB N terminus short domain 63 111 9.5E-7 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 P40_02430 b8cba2a69cc6d24ce41c52865c9a321c 747 Gene3D G3DSA:2.170.130.10 123 258 1.7E-37 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_02430 b8cba2a69cc6d24ce41c52865c9a321c 747 SUPERFAMILY SSF56935 123 747 8.36E-116 T 13-10-2018 P40_02430 b8cba2a69cc6d24ce41c52865c9a321c 747 SMART SM00965 61 112 4.3E-13 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 P40_02430 b8cba2a69cc6d24ce41c52865c9a321c 747 Pfam PF07715 TonB-dependent Receptor Plug Domain 140 253 2.9E-28 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_02430 b8cba2a69cc6d24ce41c52865c9a321c 747 Gene3D G3DSA:2.40.170.20 264 747 4.1E-120 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_02430 b8cba2a69cc6d24ce41c52865c9a321c 747 Pfam PF00593 TonB dependent receptor 283 746 3.4E-52 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_11035 97175619609386ff93b7115afe251afe 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 444 4.7E-113 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_11035 97175619609386ff93b7115afe251afe 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 464 4.8E-224 T 13-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 P40_11035 97175619609386ff93b7115afe251afe 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_11035 97175619609386ff93b7115afe251afe 477 Gene3D G3DSA:1.20.210.10 3 472 3.8E-202 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_11035 97175619609386ff93b7115afe251afe 477 SUPERFAMILY SSF81442 10 464 5.23E-123 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_19310 e252f9ea42d4160541d9b84a62643859 360 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 353 71.039 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 P40_19310 e252f9ea42d4160541d9b84a62643859 360 PIRSF PIRSF001455 5 356 1.0E-107 T 13-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 P40_19310 e252f9ea42d4160541d9b84a62643859 360 Gene3D G3DSA:1.20.1090.10 170 359 1.5E-67 T 13-10-2018 P40_19310 e252f9ea42d4160541d9b84a62643859 360 Pfam PF01761 3-dehydroquinate synthase 64 322 3.9E-112 T 13-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 P40_19310 e252f9ea42d4160541d9b84a62643859 360 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 349 1.2E-119 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 P40_19310 e252f9ea42d4160541d9b84a62643859 360 SUPERFAMILY SSF56796 5 354 5.1E-117 T 13-10-2018 P40_19310 e252f9ea42d4160541d9b84a62643859 360 Gene3D G3DSA:3.40.50.1970 1 169 8.4E-66 T 13-10-2018 P40_05860 dc3adeb9dff46dbf1990e9b2797522ec 68 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 4 44 1.9E-14 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 P40_05860 dc3adeb9dff46dbf1990e9b2797522ec 68 SMART SM00966 4 49 1.2E-8 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 P40_05860 dc3adeb9dff46dbf1990e9b2797522ec 68 Gene3D G3DSA:2.10.260.10 2 42 3.7E-10 T 13-10-2018 P40_05860 dc3adeb9dff46dbf1990e9b2797522ec 68 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 4 48 1.3E-6 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 P40_05860 dc3adeb9dff46dbf1990e9b2797522ec 68 SUPERFAMILY SSF89447 1 47 2.35E-11 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily P40_11345 a67ca57e5cc23b5444d2b9c308bd19ec 296 Pfam PF13714 Phosphoenolpyruvate phosphomutase 12 255 2.2E-51 T 13-10-2018 P40_11345 a67ca57e5cc23b5444d2b9c308bd19ec 296 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 5 293 48.91 T 13-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 P40_11345 a67ca57e5cc23b5444d2b9c308bd19ec 296 Gene3D G3DSA:3.20.20.60 2 296 3.4E-106 T 13-10-2018 P40_11345 a67ca57e5cc23b5444d2b9c308bd19ec 296 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 13-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 P40_11345 a67ca57e5cc23b5444d2b9c308bd19ec 296 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 8 292 1.9E-126 T 13-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 P40_11345 a67ca57e5cc23b5444d2b9c308bd19ec 296 SUPERFAMILY SSF51621 4 289 3.1E-100 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 P40_01740 5838c864c638d29b56c7ee8b07e0a6b7 201 SUPERFAMILY SSF52833 2 198 2.8E-43 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_01740 5838c864c638d29b56c7ee8b07e0a6b7 201 Gene3D G3DSA:3.40.30.10 1 201 1.1E-59 T 13-10-2018 P40_01740 5838c864c638d29b56c7ee8b07e0a6b7 201 PIRSF PIRSF006386 1 201 5.7E-62 T 13-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 P40_01740 5838c864c638d29b56c7ee8b07e0a6b7 201 Pfam PF01323 DSBA-like thioredoxin domain 2 195 3.4E-42 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 P40_12300 5258cbd3bfd8dacf513c46fbf99ea449 295 Pfam PF11356 Type II secretion system protein C 20 158 9.9E-34 T 13-10-2018 IPR024961 Type II secretion system protein C, N-terminal P40_12300 5258cbd3bfd8dacf513c46fbf99ea449 295 SUPERFAMILY SSF50156 184 273 3.38E-7 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 P40_12300 5258cbd3bfd8dacf513c46fbf99ea449 295 Gene3D G3DSA:2.30.30.830 89 159 7.5E-10 T 13-10-2018 P40_12300 5258cbd3bfd8dacf513c46fbf99ea449 295 Gene3D G3DSA:2.30.42.10 181 276 7.6E-6 T 13-10-2018 P40_11135 1ed36ef293eb21e997b929d86f2457c1 391 Gene3D G3DSA:1.10.240.10 251 355 1.9E-38 T 13-10-2018 P40_11135 1ed36ef293eb21e997b929d86f2457c1 391 SUPERFAMILY SSF52374 2 388 1.1E-81 T 13-10-2018 P40_11135 1ed36ef293eb21e997b929d86f2457c1 391 Pfam PF00579 tRNA synthetases class I (W and Y) 228 341 9.4E-11 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_11135 1ed36ef293eb21e997b929d86f2457c1 391 Pfam PF00579 tRNA synthetases class I (W and Y) 1 168 9.8E-45 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_11135 1ed36ef293eb21e997b929d86f2457c1 391 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 136 157 2.7E-19 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 P40_11135 1ed36ef293eb21e997b929d86f2457c1 391 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 7 23 2.7E-19 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 P40_11135 1ed36ef293eb21e997b929d86f2457c1 391 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 58 77 2.7E-19 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 P40_11135 1ed36ef293eb21e997b929d86f2457c1 391 Gene3D G3DSA:3.40.50.620 1 221 7.6E-70 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_11145 76c3fa69cdc2aefa65949e492d94f772 291 SMART SM00481 5 70 1.5E-22 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal P40_11145 76c3fa69cdc2aefa65949e492d94f772 291 Gene3D G3DSA:3.20.20.140 6 251 2.8E-73 T 13-10-2018 P40_11145 76c3fa69cdc2aefa65949e492d94f772 291 SUPERFAMILY SSF89550 6 276 1.43E-45 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 P40_11145 76c3fa69cdc2aefa65949e492d94f772 291 Pfam PF02811 PHP domain 6 126 2.4E-10 T 13-10-2018 IPR004013 PHP domain GO:0003824 P40_11145 76c3fa69cdc2aefa65949e492d94f772 291 Gene3D G3DSA:1.10.150.650 98 170 2.8E-73 T 13-10-2018 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 13-10-2018 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 Gene3D G3DSA:3.30.2090.10 721 809 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 SUPERFAMILY SSF82693 136 330 4.97E-25 T 13-10-2018 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 SUPERFAMILY SSF82693 565 670 9.94E-31 T 13-10-2018 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 SUPERFAMILY SSF82714 182 272 6.02E-22 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 Gene3D G3DSA:3.30.70.1440 669 865 0.0 T 13-10-2018 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1028 0.0 T 13-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 SUPERFAMILY SSF82866 296 497 3.14E-48 T 13-10-2018 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 Gene3D G3DSA:3.30.70.1430 38 817 0.0 T 13-10-2018 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 Gene3D G3DSA:1.20.1640.10 513 1022 0.0 T 13-10-2018 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 Gene3D G3DSA:3.30.70.1430 567 668 0.0 T 13-10-2018 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 13-10-2018 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 Pfam PF00873 AcrB/AcrD/AcrF family 1 1026 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 SUPERFAMILY SSF82693 38 133 1.31E-27 T 13-10-2018 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.7E-110 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.7E-110 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.7E-110 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.7E-110 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.7E-110 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.7E-110 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.7E-110 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.7E-110 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.7E-110 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 SUPERFAMILY SSF82866 805 1027 3.14E-43 T 13-10-2018 P40_07765 346d6f88a9a07327cdd1b8a39fa4818e 1048 SUPERFAMILY SSF82714 722 808 7.98E-22 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_09075 2123920255b35b5ea9c8b879c689ecca 128 SUPERFAMILY SSF55718 3 111 3.53E-10 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily P40_09075 2123920255b35b5ea9c8b879c689ecca 128 Gene3D G3DSA:3.30.1050.10 3 119 1.9E-11 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily P40_09075 2123920255b35b5ea9c8b879c689ecca 128 Pfam PF02036 SCP-2 sterol transfer family 29 109 2.4E-5 T 13-10-2018 IPR003033 SCP2 sterol-binding domain P40_09360 7b563c6adf786007d58c7785b6d2d918 330 SUPERFAMILY SSF51430 1 320 6.42E-86 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_09360 7b563c6adf786007d58c7785b6d2d918 330 Pfam PF00248 Aldo/keto reductase family 16 312 7.1E-63 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain P40_09360 7b563c6adf786007d58c7785b6d2d918 330 PRINTS PR00069 Aldo-keto reductase signature 142 159 1.0E-9 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_09360 7b563c6adf786007d58c7785b6d2d918 330 PRINTS PR00069 Aldo-keto reductase signature 111 129 1.0E-9 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_09360 7b563c6adf786007d58c7785b6d2d918 330 PRINTS PR00069 Aldo-keto reductase signature 45 69 1.0E-9 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_09360 7b563c6adf786007d58c7785b6d2d918 330 Gene3D G3DSA:3.20.20.100 2 330 1.2E-102 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_14515 f3880d4accf4db1217832e6fa141ca16 243 Pfam PF00535 Glycosyl transferase family 2 6 87 1.5E-16 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 P40_14515 f3880d4accf4db1217832e6fa141ca16 243 SUPERFAMILY SSF53448 4 213 4.69E-30 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_14515 f3880d4accf4db1217832e6fa141ca16 243 Gene3D G3DSA:3.90.550.10 1 118 6.4E-22 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_14515 f3880d4accf4db1217832e6fa141ca16 243 TIGRFAM TIGR04283 glyco_like_mftF: transferase 2, rSAM/selenodomain-associated 5 223 1.5E-75 T 13-10-2018 IPR026461 Transferase 2, rSAM/selenodomain-associated P40_16220 d6eb0d15bdd019a7974f40eaf5a973fc 607 SMART SM00387 501 593 9.0E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_16220 d6eb0d15bdd019a7974f40eaf5a973fc 607 Gene3D G3DSA:3.30.565.10 466 591 2.6E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_16220 d6eb0d15bdd019a7974f40eaf5a973fc 607 SUPERFAMILY SSF55874 469 591 4.07E-14 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_11195 5b55a12f773daab9c625b65107ab1766 224 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_11195 5b55a12f773daab9c625b65107ab1766 224 Gene3D G3DSA:3.40.50.300 4 222 3.7E-60 T 13-10-2018 P40_11195 5b55a12f773daab9c625b65107ab1766 224 SMART SM00382 35 222 7.8E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_11195 5b55a12f773daab9c625b65107ab1766 224 Pfam PF00005 ABC transporter 26 172 2.8E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_11195 5b55a12f773daab9c625b65107ab1766 224 SUPERFAMILY SSF52540 7 221 3.25E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_06465 ac810f91694b2600159d49125c023662 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 40 422 6.2E-50 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_06465 ac810f91694b2600159d49125c023662 460 Pfam PF01554 MatE 267 421 1.6E-18 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_06465 ac810f91694b2600159d49125c023662 460 Pfam PF01554 MatE 40 200 4.1E-16 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_06465 ac810f91694b2600159d49125c023662 460 PIRSF PIRSF006603 15 458 1.0E-72 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_11980 a39fcc85e8efcbadfdb4084019a24783 287 SUPERFAMILY SSF51658 27 215 1.21E-14 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily P40_11980 a39fcc85e8efcbadfdb4084019a24783 287 Pfam PF05114 Protein of unknown function (DUF692) 10 272 1.3E-96 T 13-10-2018 IPR007801 Uncharacterised protein family UPF0276 P40_11980 a39fcc85e8efcbadfdb4084019a24783 287 Hamap MF_00697 UPF0276 protein . 10 280 44.778 T 13-10-2018 IPR007801 Uncharacterised protein family UPF0276 P40_11980 a39fcc85e8efcbadfdb4084019a24783 287 Gene3D G3DSA:3.20.20.150 6 283 4.0E-82 T 13-10-2018 P40_04960 8e249a599cd59f4c85e78059784c9f58 109 Gene3D G3DSA:1.10.10.10 2 109 8.2E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_04960 8e249a599cd59f4c85e78059784c9f58 109 Pfam PF12840 Helix-turn-helix domain 10 69 8.4E-16 T 13-10-2018 P40_04960 8e249a599cd59f4c85e78059784c9f58 109 SUPERFAMILY SSF46785 1 103 1.17E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_04960 8e249a599cd59f4c85e78059784c9f58 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 4.2E-9 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_04960 8e249a599cd59f4c85e78059784c9f58 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 4.2E-9 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_04960 8e249a599cd59f4c85e78059784c9f58 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 4.2E-9 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_04960 8e249a599cd59f4c85e78059784c9f58 109 SMART SM00418 11 89 9.1E-18 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_15175 4e84205bb2fb9354072e29ee6d6c6034 246 Gene3D G3DSA:3.40.50.300 1 246 4.3E-53 T 13-10-2018 P40_15175 4e84205bb2fb9354072e29ee6d6c6034 246 SUPERFAMILY SSF52540 1 244 1.14E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_15175 4e84205bb2fb9354072e29ee6d6c6034 246 Pfam PF13614 AAA domain 1 162 2.4E-34 T 13-10-2018 IPR025669 AAA domain P40_19600 4bd38329973c5a1babf54c1b4db10adb 171 SUPERFAMILY SSF46557 13 86 2.09E-24 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 P40_19600 4bd38329973c5a1babf54c1b4db10adb 171 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 13 164 2.6E-69 T 13-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 P40_19600 4bd38329973c5a1babf54c1b4db10adb 171 Hamap MF_00930 Transcription elongation factor GreB [greB]. 10 165 50.797 T 13-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 P40_19600 4bd38329973c5a1babf54c1b4db10adb 171 PIRSF PIRSF006092 10 165 1.1E-47 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 P40_19600 4bd38329973c5a1babf54c1b4db10adb 171 Gene3D G3DSA:3.10.50.30 86 167 2.5E-30 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 P40_19600 4bd38329973c5a1babf54c1b4db10adb 171 Hamap MF_00105 Transcription elongation factor GreA [greA]. 11 163 26.425 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 P40_19600 4bd38329973c5a1babf54c1b4db10adb 171 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 91 164 2.7E-24 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 P40_19600 4bd38329973c5a1babf54c1b4db10adb 171 Gene3D G3DSA:1.10.287.180 11 85 1.0E-27 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 P40_19600 4bd38329973c5a1babf54c1b4db10adb 171 Pfam PF03449 Transcription elongation factor, N-terminal 14 82 1.1E-24 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 P40_19600 4bd38329973c5a1babf54c1b4db10adb 171 SUPERFAMILY SSF54534 89 165 7.72E-23 T 13-10-2018 P40_18580 3c10bea4d4d61574943727c3fa4be414 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 4.6E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_18580 3c10bea4d4d61574943727c3fa4be414 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 4.6E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_18580 3c10bea4d4d61574943727c3fa4be414 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 4.6E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_18580 3c10bea4d4d61574943727c3fa4be414 147 Gene3D G3DSA:1.10.10.10 5 142 8.9E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_18580 3c10bea4d4d61574943727c3fa4be414 147 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site P40_18580 3c10bea4d4d61574943727c3fa4be414 147 SMART SM00347 25 125 1.9E-23 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_18580 3c10bea4d4d61574943727c3fa4be414 147 SUPERFAMILY SSF46785 7 142 8.47E-35 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_18580 3c10bea4d4d61574943727c3fa4be414 147 Pfam PF01047 MarR family 32 88 2.8E-15 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_13270 78c9cf60eb6c210bbe210c832a8867c0 582 Pfam PF00664 ABC transporter transmembrane region 28 292 3.3E-41 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 P40_13270 78c9cf60eb6c210bbe210c832a8867c0 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 11 577 4.8E-217 T 13-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 P40_13270 78c9cf60eb6c210bbe210c832a8867c0 582 SMART SM00382 364 551 2.0E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_13270 78c9cf60eb6c210bbe210c832a8867c0 582 Pfam PF00005 ABC transporter 355 505 1.3E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_13270 78c9cf60eb6c210bbe210c832a8867c0 582 Gene3D G3DSA:1.20.1560.10 1 326 3.9E-69 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 P40_13270 78c9cf60eb6c210bbe210c832a8867c0 582 SUPERFAMILY SSF52540 330 575 5.54E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_13270 78c9cf60eb6c210bbe210c832a8867c0 582 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_13270 78c9cf60eb6c210bbe210c832a8867c0 582 Gene3D G3DSA:3.40.50.300 330 579 1.2E-94 T 13-10-2018 P40_13270 78c9cf60eb6c210bbe210c832a8867c0 582 SUPERFAMILY SSF90123 13 324 4.97E-63 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 P40_07785 d52336b628dde4bb230d48a9afab241d 352 Gene3D G3DSA:3.30.200.20 15 116 2.0E-37 T 13-10-2018 P40_07785 d52336b628dde4bb230d48a9afab241d 352 SUPERFAMILY SSF56112 16 331 5.61E-66 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_07785 d52336b628dde4bb230d48a9afab241d 352 Pfam PF01636 Phosphotransferase enzyme family 37 261 1.2E-54 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase P40_07785 d52336b628dde4bb230d48a9afab241d 352 Gene3D G3DSA:3.90.1200.10 117 352 4.2E-90 T 13-10-2018 P40_05455 1539ba48fdb09aaab1a5df5e60027f97 292 SUPERFAMILY SSF53474 3 278 4.22E-33 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_05455 1539ba48fdb09aaab1a5df5e60027f97 292 Pfam PF12146 Serine aminopeptidase, S33 40 135 3.7E-18 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 P40_05455 1539ba48fdb09aaab1a5df5e60027f97 292 Gene3D G3DSA:3.40.50.1820 6 280 4.0E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_05455 1539ba48fdb09aaab1a5df5e60027f97 292 PIRSF PIRSF037442 2 284 2.9E-63 T 13-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 SUPERFAMILY SSF50249 343 440 8.95E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 SMART SM00316 275 347 7.8E-26 T 13-10-2018 IPR022967 RNA-binding domain, S1 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 SMART SM00316 190 260 1.9E-28 T 13-10-2018 IPR022967 RNA-binding domain, S1 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 SMART SM00316 362 434 1.4E-19 T 13-10-2018 IPR022967 RNA-binding domain, S1 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 SMART SM00316 449 520 2.5E-22 T 13-10-2018 IPR022967 RNA-binding domain, S1 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 SMART SM00316 19 87 3.3E-5 T 13-10-2018 IPR022967 RNA-binding domain, S1 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 SMART SM00316 103 171 6.8E-7 T 13-10-2018 IPR022967 RNA-binding domain, S1 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 Gene3D G3DSA:2.40.50.140 100 183 1.0E-7 T 13-10-2018 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 Gene3D G3DSA:2.40.50.140 6 99 1.0E-16 T 13-10-2018 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 Gene3D G3DSA:2.40.50.140 445 527 4.8E-21 T 13-10-2018 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 Pfam PF00575 S1 RNA binding domain 449 520 1.7E-16 T 13-10-2018 IPR003029 S1 domain GO:0003676 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 Pfam PF00575 S1 RNA binding domain 19 79 3.4E-5 T 13-10-2018 IPR003029 S1 domain GO:0003676 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 Pfam PF00575 S1 RNA binding domain 103 171 2.3E-12 T 13-10-2018 IPR003029 S1 domain GO:0003676 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 Pfam PF00575 S1 RNA binding domain 274 347 2.9E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 Pfam PF00575 S1 RNA binding domain 189 260 2.2E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 Pfam PF00575 S1 RNA binding domain 362 434 9.0E-18 T 13-10-2018 IPR003029 S1 domain GO:0003676 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 Gene3D G3DSA:2.40.50.140 187 268 3.6E-28 T 13-10-2018 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 PIRSF PIRSF002111 1 534 3.9E-218 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 SUPERFAMILY SSF50249 255 355 2.76E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 SUPERFAMILY SSF50249 2 112 4.37E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 Gene3D G3DSA:2.40.50.140 358 444 2.3E-24 T 13-10-2018 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 Gene3D G3DSA:2.40.50.140 269 357 1.6E-28 T 13-10-2018 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 SUPERFAMILY SSF50249 103 185 1.25E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 4.8E-218 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 SUPERFAMILY SSF50249 429 531 1.85E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 SUPERFAMILY SSF50249 189 277 3.88E-27 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.9E-87 T 13-10-2018 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.9E-87 T 13-10-2018 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.9E-87 T 13-10-2018 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.9E-87 T 13-10-2018 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.9E-87 T 13-10-2018 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.9E-87 T 13-10-2018 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.9E-87 T 13-10-2018 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.9E-87 T 13-10-2018 P40_13805 a3865c02c9ff9baa7017060a2c30c73c 559 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.9E-87 T 13-10-2018 P40_03835 1e93ef4f2f3bbc1bcc557229b2467493 161 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.8E-68 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 P40_03835 1e93ef4f2f3bbc1bcc557229b2467493 161 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 88.751 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 P40_03835 1e93ef4f2f3bbc1bcc557229b2467493 161 Pfam PF03477 ATP cone domain 50 136 1.4E-16 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 P40_06830 bb68f426b8835913aa60b4f6c88710c2 401 SUPERFAMILY SSF47203 242 396 5.32E-34 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_06830 bb68f426b8835913aa60b4f6c88710c2 401 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 393 4.0E-36 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_06830 bb68f426b8835913aa60b4f6c88710c2 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 1.1E-21 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_06830 bb68f426b8835913aa60b4f6c88710c2 401 SUPERFAMILY SSF56645 82 254 2.75E-44 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_06830 bb68f426b8835913aa60b4f6c88710c2 401 Gene3D G3DSA:1.20.140.10 248 398 2.0E-32 T 13-10-2018 P40_06830 bb68f426b8835913aa60b4f6c88710c2 401 Gene3D G3DSA:2.40.110.10 130 247 4.8E-36 T 13-10-2018 P40_06830 bb68f426b8835913aa60b4f6c88710c2 401 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 351 370 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_16975 a2b1cfd82547713291765a4ff8bd96bf 240 Gene3D G3DSA:2.60.120.380 34 134 6.9E-8 T 13-10-2018 P40_21285 0dc4caf175ed51115c7b14b2486078e1 460 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 455 8.2E-94 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_21285 0dc4caf175ed51115c7b14b2486078e1 460 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 15 450 3.3E-89 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_05185 f0dbea1e5450df2d7b4ed7a8e5452ab0 146 PIRSF PIRSF001263 1 146 1.7E-53 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 P40_05185 f0dbea1e5450df2d7b4ed7a8e5452ab0 146 SUPERFAMILY SSF47413 2 77 7.82E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_05185 f0dbea1e5450df2d7b4ed7a8e5452ab0 146 Gene3D G3DSA:3.30.1160.10 80 146 2.8E-35 T 13-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 P40_05185 f0dbea1e5450df2d7b4ed7a8e5452ab0 146 Pfam PF02560 Cyanate lyase C-terminal domain 78 144 9.0E-37 T 13-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 P40_05185 f0dbea1e5450df2d7b4ed7a8e5452ab0 146 SMART SM01116 74 146 2.3E-49 T 13-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 P40_05185 f0dbea1e5450df2d7b4ed7a8e5452ab0 146 PRINTS PR01693 Cyanase signature 100 116 2.0E-29 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 P40_05185 f0dbea1e5450df2d7b4ed7a8e5452ab0 146 PRINTS PR01693 Cyanase signature 82 96 2.0E-29 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 P40_05185 f0dbea1e5450df2d7b4ed7a8e5452ab0 146 PRINTS PR01693 Cyanase signature 14 29 2.0E-29 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 P40_05185 f0dbea1e5450df2d7b4ed7a8e5452ab0 146 PRINTS PR01693 Cyanase signature 34 51 2.0E-29 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 P40_05185 f0dbea1e5450df2d7b4ed7a8e5452ab0 146 PRINTS PR01693 Cyanase signature 131 141 2.0E-29 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 P40_05185 f0dbea1e5450df2d7b4ed7a8e5452ab0 146 TIGRFAM TIGR00673 cynS: cyanase 4 146 3.0E-52 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 P40_05185 f0dbea1e5450df2d7b4ed7a8e5452ab0 146 SUPERFAMILY SSF55234 79 146 1.57E-30 T 13-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 P40_05185 f0dbea1e5450df2d7b4ed7a8e5452ab0 146 Gene3D G3DSA:1.10.260.40 1 77 1.1E-20 T 13-10-2018 P40_05185 f0dbea1e5450df2d7b4ed7a8e5452ab0 146 Hamap MF_00535 Cyanate hydratase [cynS]. 1 146 69.737 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 P40_15235 fc9c4ad79c2e9beced0339044ca6ca4a 626 SUPERFAMILY SSF53474 33 170 4.95E-13 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_15235 fc9c4ad79c2e9beced0339044ca6ca4a 626 Gene3D G3DSA:3.40.50.1820 28 276 1.0E-25 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_15235 fc9c4ad79c2e9beced0339044ca6ca4a 626 SUPERFAMILY SSF53474 124 301 8.79E-23 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_15235 fc9c4ad79c2e9beced0339044ca6ca4a 626 Gene3D G3DSA:2.60.40.10 308 398 2.5E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold P40_15235 fc9c4ad79c2e9beced0339044ca6ca4a 626 Pfam PF10503 Esterase PHB depolymerase 45 223 1.7E-25 T 13-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 P40_15235 fc9c4ad79c2e9beced0339044ca6ca4a 626 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 35 237 3.6E-45 T 13-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 P40_15235 fc9c4ad79c2e9beced0339044ca6ca4a 626 SUPERFAMILY SSF49464 323 417 5.89E-5 T 13-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily P40_07005 e85695a563636b53dfeef8858cf2af3c 141 Gene3D G3DSA:1.20.120.330 22 137 1.4E-5 T 13-10-2018 P40_05085 9b6f15adfa210c46ccb3fe157aa97eec 370 SUPERFAMILY SSF69189 261 353 1.75E-24 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P40_05085 9b6f15adfa210c46ccb3fe157aa97eec 370 Gene3D G3DSA:3.40.710.10 6 259 9.8E-97 T 13-10-2018 P40_05085 9b6f15adfa210c46ccb3fe157aa97eec 370 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 261 351 7.4E-24 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P40_05085 9b6f15adfa210c46ccb3fe157aa97eec 370 SMART SM00936 261 351 1.8E-32 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P40_05085 9b6f15adfa210c46ccb3fe157aa97eec 370 SUPERFAMILY SSF56601 3 261 4.97E-86 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like P40_05085 9b6f15adfa210c46ccb3fe157aa97eec 370 Gene3D G3DSA:2.60.410.10 261 351 4.3E-29 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P40_05085 9b6f15adfa210c46ccb3fe157aa97eec 370 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 128 141 7.8E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 P40_05085 9b6f15adfa210c46ccb3fe157aa97eec 370 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 101 118 7.8E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 P40_05085 9b6f15adfa210c46ccb3fe157aa97eec 370 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 48 59 7.8E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 P40_05085 9b6f15adfa210c46ccb3fe157aa97eec 370 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 14 240 1.3E-83 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 P40_01885 446e67cd6e97223cd0ee25882a06e22d 215 Pfam PF00753 Metallo-beta-lactamase superfamily 101 180 2.9E-8 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_01885 446e67cd6e97223cd0ee25882a06e22d 215 Gene3D G3DSA:3.60.15.10 1 214 1.1E-16 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_01885 446e67cd6e97223cd0ee25882a06e22d 215 SUPERFAMILY SSF56281 2 185 2.03E-26 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_01885 446e67cd6e97223cd0ee25882a06e22d 215 SMART SM00849 21 184 1.1E-4 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_14120 d858840bcb0b6a97238b8d51b0594d17 542 SUPERFAMILY SSF56801 13 541 1.7E-141 T 13-10-2018 P40_14120 d858840bcb0b6a97238b8d51b0594d17 542 Gene3D G3DSA:3.30.300.310 439 542 1.5E-33 T 13-10-2018 P40_14120 d858840bcb0b6a97238b8d51b0594d17 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 529 1.3E-21 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_14120 d858840bcb0b6a97238b8d51b0594d17 542 Gene3D G3DSA:3.40.50.12780 6 438 2.3E-114 T 13-10-2018 P40_14120 d858840bcb0b6a97238b8d51b0594d17 542 Pfam PF00501 AMP-binding enzyme 25 443 2.0E-95 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_09470 7ed0e65d934237723ff613386fdb2913 315 SUPERFAMILY SSF51905 2 310 2.41E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_09470 7ed0e65d934237723ff613386fdb2913 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 310 4.0E-121 T 13-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 P40_09470 7ed0e65d934237723ff613386fdb2913 315 Gene3D G3DSA:3.50.50.60 9 309 1.1E-120 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_09470 7ed0e65d934237723ff613386fdb2913 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 2.1E-39 T 13-10-2018 P40_09470 7ed0e65d934237723ff613386fdb2913 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.1E-39 T 13-10-2018 P40_09470 7ed0e65d934237723ff613386fdb2913 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.1E-39 T 13-10-2018 P40_09470 7ed0e65d934237723ff613386fdb2913 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 285 2.1E-39 T 13-10-2018 P40_09470 7ed0e65d934237723ff613386fdb2913 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.1E-39 T 13-10-2018 P40_09470 7ed0e65d934237723ff613386fdb2913 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.3E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_09470 7ed0e65d934237723ff613386fdb2913 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.3E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_09470 7ed0e65d934237723ff613386fdb2913 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 235 256 1.3E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_09470 7ed0e65d934237723ff613386fdb2913 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.3E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_09470 7ed0e65d934237723ff613386fdb2913 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.3E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_09470 7ed0e65d934237723ff613386fdb2913 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.3E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_09470 7ed0e65d934237723ff613386fdb2913 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.3E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_09470 7ed0e65d934237723ff613386fdb2913 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 212 1.3E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_09470 7ed0e65d934237723ff613386fdb2913 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 273 291 1.3E-76 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_09470 7ed0e65d934237723ff613386fdb2913 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 299 3.3E-47 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_09470 7ed0e65d934237723ff613386fdb2913 315 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 P40_09470 7ed0e65d934237723ff613386fdb2913 315 Gene3D G3DSA:3.50.50.60 118 241 1.1E-120 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_20405 ce6e896b2c14ced212d902878f7755c5 864 Gene3D G3DSA:1.10.287.130 633 704 1.5E-7 T 13-10-2018 P40_20405 ce6e896b2c14ced212d902878f7755c5 864 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 753 859 9.4E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_20405 ce6e896b2c14ced212d902878f7755c5 864 SUPERFAMILY SSF55874 694 860 6.29E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_20405 ce6e896b2c14ced212d902878f7755c5 864 SMART SM01080 36 323 3.1E-86 T 13-10-2018 IPR007890 CHASE2 P40_20405 ce6e896b2c14ced212d902878f7755c5 864 SMART SM00387 750 862 2.4E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_20405 ce6e896b2c14ced212d902878f7755c5 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 846 859 1.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_20405 ce6e896b2c14ced212d902878f7755c5 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 822 840 1.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_20405 ce6e896b2c14ced212d902878f7755c5 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 787 801 1.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_20405 ce6e896b2c14ced212d902878f7755c5 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 805 815 1.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_20405 ce6e896b2c14ced212d902878f7755c5 864 Gene3D G3DSA:3.30.565.10 709 862 6.6E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_20405 ce6e896b2c14ced212d902878f7755c5 864 Pfam PF05226 CHASE2 domain 28 318 6.6E-51 T 13-10-2018 IPR007890 CHASE2 P40_20405 ce6e896b2c14ced212d902878f7755c5 864 SUPERFAMILY SSF47384 627 702 6.28E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_20405 ce6e896b2c14ced212d902878f7755c5 864 Gene3D G3DSA:3.30.450.20 499 632 7.8E-6 T 13-10-2018 P40_20405 ce6e896b2c14ced212d902878f7755c5 864 PIRSF PIRSF037347 2 419 2.8E-85 T 13-10-2018 IPR017181 Signal transduction histidine kinase, CHASE2 sensor domain-containing, predicted P40_20405 ce6e896b2c14ced212d902878f7755c5 864 PIRSF PIRSF037347 482 863 2.9E-79 T 13-10-2018 IPR017181 Signal transduction histidine kinase, CHASE2 sensor domain-containing, predicted P40_20765 87a5636b75e72bace3a82646e7fb3dfb 473 Gene3D G3DSA:1.20.1600.10 55 455 3.3E-121 T 13-10-2018 P40_20765 87a5636b75e72bace3a82646e7fb3dfb 473 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 455 1.5E-123 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 P40_20765 87a5636b75e72bace3a82646e7fb3dfb 473 SUPERFAMILY SSF56954 1 457 1.22E-109 T 13-10-2018 P40_20765 87a5636b75e72bace3a82646e7fb3dfb 473 Pfam PF02321 Outer membrane efflux protein 274 453 2.1E-25 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_20765 87a5636b75e72bace3a82646e7fb3dfb 473 Pfam PF02321 Outer membrane efflux protein 65 246 2.3E-26 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_20765 87a5636b75e72bace3a82646e7fb3dfb 473 Gene3D G3DSA:2.20.200.10 101 344 3.3E-121 T 13-10-2018 P40_15075 973d5b2059d45890c7b95a258df2aff7 190 ProSitePatterns PS01068 OmpA-like domain. 117 161 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 P40_15075 973d5b2059d45890c7b95a258df2aff7 190 SUPERFAMILY SSF103088 78 183 1.96E-33 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_15075 973d5b2059d45890c7b95a258df2aff7 190 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 83 185 3.9E-41 T 13-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 P40_15075 973d5b2059d45890c7b95a258df2aff7 190 Gene3D G3DSA:3.30.1330.60 63 185 7.8E-37 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_15075 973d5b2059d45890c7b95a258df2aff7 190 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 2 185 29.018 T 13-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 P40_15075 973d5b2059d45890c7b95a258df2aff7 190 PRINTS PR01021 OMPA domain signature 115 130 2.6E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_15075 973d5b2059d45890c7b95a258df2aff7 190 PRINTS PR01021 OMPA domain signature 130 146 2.6E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_15075 973d5b2059d45890c7b95a258df2aff7 190 PRINTS PR01021 OMPA domain signature 85 107 2.6E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_15075 973d5b2059d45890c7b95a258df2aff7 190 Pfam PF00691 OmpA family 84 179 3.5E-20 T 13-10-2018 IPR006665 OmpA-like domain P40_08555 2f53aaa5d43ff5efc054a2a19a26eee8 536 Gene3D G3DSA:3.90.226.10 1 271 1.1E-69 T 13-10-2018 P40_08555 2f53aaa5d43ff5efc054a2a19a26eee8 536 SUPERFAMILY SSF52096 269 534 2.16E-81 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_08555 2f53aaa5d43ff5efc054a2a19a26eee8 536 Gene3D G3DSA:3.90.226.10 272 536 1.0E-96 T 13-10-2018 P40_08555 2f53aaa5d43ff5efc054a2a19a26eee8 536 Pfam PF01039 Carboxyl transferase domain 49 522 5.8E-118 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 P40_08555 2f53aaa5d43ff5efc054a2a19a26eee8 536 SUPERFAMILY SSF52096 39 268 3.32E-55 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_08805 a2cc722fe5e5d6512860aa4da42b21d7 78 Pfam PF04400 (Na+)-NQR maturation NqrM 23 65 3.5E-15 T 13-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM P40_12175 5519ba41d227fdc2f1168f10a83e4918 445 SUPERFAMILY SSF56954 8 422 8.76E-45 T 13-10-2018 P40_12175 5519ba41d227fdc2f1168f10a83e4918 445 Pfam PF02321 Outer membrane efflux protein 40 225 1.4E-17 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_12175 5519ba41d227fdc2f1168f10a83e4918 445 Pfam PF02321 Outer membrane efflux protein 257 422 1.4E-9 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_12175 5519ba41d227fdc2f1168f10a83e4918 445 Gene3D G3DSA:1.20.1600.10 34 423 1.0E-36 T 13-10-2018 P40_20825 4bee410bc68d96c117c66024745d7ab2 170 SUPERFAMILY SSF160387 61 163 3.92E-31 T 13-10-2018 P40_20825 4bee410bc68d96c117c66024745d7ab2 170 Pfam PF05573 NosL 18 159 5.1E-48 T 13-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL P40_20825 4bee410bc68d96c117c66024745d7ab2 170 Gene3D G3DSA:3.30.70.2050 114 165 1.2E-6 T 13-10-2018 P40_20825 4bee410bc68d96c117c66024745d7ab2 170 Gene3D G3DSA:3.30.70.2060 62 113 1.8E-6 T 13-10-2018 P40_02460 00921301f3286324357574c1f2519a4e 551 Pfam PF00501 AMP-binding enzyme 40 443 1.8E-76 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_02460 00921301f3286324357574c1f2519a4e 551 Gene3D G3DSA:3.30.300.30 440 551 5.5E-29 T 13-10-2018 P40_02460 00921301f3286324357574c1f2519a4e 551 Gene3D G3DSA:3.40.50.12780 22 439 4.3E-95 T 13-10-2018 P40_02460 00921301f3286324357574c1f2519a4e 551 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 530 1.7E-24 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_02460 00921301f3286324357574c1f2519a4e 551 SUPERFAMILY SSF56801 28 542 5.36E-140 T 13-10-2018 P40_02460 00921301f3286324357574c1f2519a4e 551 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_20245 d9f30b15285a42768aeed5b8a9807465 237 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 39 60 6.1E-14 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) P40_20245 d9f30b15285a42768aeed5b8a9807465 237 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 143 160 6.1E-14 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) P40_20245 d9f30b15285a42768aeed5b8a9807465 237 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 103 123 6.1E-14 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) P40_20245 d9f30b15285a42768aeed5b8a9807465 237 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 80 102 6.1E-14 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) P40_20245 d9f30b15285a42768aeed5b8a9807465 237 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 1 203 1.3E-48 T 13-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region P40_20245 d9f30b15285a42768aeed5b8a9807465 237 Gene3D G3DSA:2.120.10.30 1 228 7.5E-59 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_20245 d9f30b15285a42768aeed5b8a9807465 237 SUPERFAMILY SSF63829 7 225 1.28E-42 T 13-10-2018 P40_16495 9795bbaccbc4f55959ac58c5aa3fa9f5 270 SUPERFAMILY SSF56281 17 243 3.64E-27 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_16495 9795bbaccbc4f55959ac58c5aa3fa9f5 270 Pfam PF00753 Metallo-beta-lactamase superfamily 26 224 1.6E-19 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_16495 9795bbaccbc4f55959ac58c5aa3fa9f5 270 Gene3D G3DSA:3.60.15.10 3 242 5.6E-27 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_16495 9795bbaccbc4f55959ac58c5aa3fa9f5 270 SMART SM00849 28 224 4.4E-11 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_11645 a440abe09e7b5b4b08d617b0526ba5b0 695 SUPERFAMILY SSF51735 2 138 6.37E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_11645 a440abe09e7b5b4b08d617b0526ba5b0 695 Gene3D G3DSA:3.40.50.261 129 293 9.1E-53 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_11645 a440abe09e7b5b4b08d617b0526ba5b0 695 Pfam PF13380 CoA binding domain 9 132 2.4E-23 T 13-10-2018 IPR003781 CoA-binding GO:0048037 P40_11645 a440abe09e7b5b4b08d617b0526ba5b0 695 SUPERFAMILY SSF52210 131 291 1.31E-40 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_11645 a440abe09e7b5b4b08d617b0526ba5b0 695 SUPERFAMILY SSF52210 298 452 6.15E-20 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_11645 a440abe09e7b5b4b08d617b0526ba5b0 695 Gene3D G3DSA:3.30.470.20 478 689 9.9E-77 T 13-10-2018 P40_11645 a440abe09e7b5b4b08d617b0526ba5b0 695 Gene3D G3DSA:3.40.50.261 297 457 5.6E-23 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_11645 a440abe09e7b5b4b08d617b0526ba5b0 695 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 154 290 1.1E-49 T 13-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain P40_11645 a440abe09e7b5b4b08d617b0526ba5b0 695 Pfam PF13549 ATP-grasp domain 478 689 1.2E-64 T 13-10-2018 P40_11645 a440abe09e7b5b4b08d617b0526ba5b0 695 SMART SM00881 4 99 2.0E-32 T 13-10-2018 IPR003781 CoA-binding GO:0048037 P40_11645 a440abe09e7b5b4b08d617b0526ba5b0 695 Gene3D G3DSA:3.40.50.720 1 128 1.1E-42 T 13-10-2018 P40_11645 a440abe09e7b5b4b08d617b0526ba5b0 695 Gene3D G3DSA:3.30.1490.20 495 572 9.9E-77 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_11645 a440abe09e7b5b4b08d617b0526ba5b0 695 SUPERFAMILY SSF56059 477 692 1.53E-38 T 13-10-2018 P40_07480 d1947858a1d88832e246b194478c505e 187 PIRSF PIRSF000232 1 187 1.6E-71 T 13-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like P40_07480 d1947858a1d88832e246b194478c505e 187 Pfam PF00881 Nitroreductase family 9 163 2.5E-28 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 P40_07480 d1947858a1d88832e246b194478c505e 187 Gene3D G3DSA:3.40.109.10 1 176 4.8E-48 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 P40_07480 d1947858a1d88832e246b194478c505e 187 SUPERFAMILY SSF55469 1 183 3.66E-44 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 P40_20205 49b94bc3155b5d987fbaf74fd9f3fae0 172 SUPERFAMILY SSF52540 4 169 1.0E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_20205 49b94bc3155b5d987fbaf74fd9f3fae0 172 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 168 2.3E-58 T 13-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 P40_20205 49b94bc3155b5d987fbaf74fd9f3fae0 172 Gene3D G3DSA:3.40.50.300 3 169 2.0E-53 T 13-10-2018 P40_20205 49b94bc3155b5d987fbaf74fd9f3fae0 172 PIRSF PIRSF006135 2 171 5.4E-50 T 13-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 P40_21340 ff98c2823419dbf9ecc8d1dcaddc405b 251 Gene3D G3DSA:2.30.42.10 1 78 7.3E-7 T 13-10-2018 P40_21340 ff98c2823419dbf9ecc8d1dcaddc405b 251 SUPERFAMILY SSF50156 2 79 7.82E-8 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 P40_01215 5d745172c2b56fae6b496cba36e05375 430 PIRSF PIRSF006603 1 426 1.7E-75 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_01215 5d745172c2b56fae6b496cba36e05375 430 Pfam PF01554 MatE 5 160 3.6E-19 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_01215 5d745172c2b56fae6b496cba36e05375 430 Pfam PF01554 MatE 223 383 5.3E-17 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_05305 235af25675b0ff9c215a488465a2f32f 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_05305 235af25675b0ff9c215a488465a2f32f 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.3E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05305 235af25675b0ff9c215a488465a2f32f 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.3E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05305 235af25675b0ff9c215a488465a2f32f 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.3E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05305 235af25675b0ff9c215a488465a2f32f 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.3E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05305 235af25675b0ff9c215a488465a2f32f 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.3E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05305 235af25675b0ff9c215a488465a2f32f 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05305 235af25675b0ff9c215a488465a2f32f 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05305 235af25675b0ff9c215a488465a2f32f 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05305 235af25675b0ff9c215a488465a2f32f 278 Pfam PF00106 short chain dehydrogenase 7 199 5.3E-53 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_05305 235af25675b0ff9c215a488465a2f32f 278 SUPERFAMILY SSF51735 1 271 7.6E-71 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_05305 235af25675b0ff9c215a488465a2f32f 278 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 181 6.7E-4 T 13-10-2018 P40_05305 235af25675b0ff9c215a488465a2f32f 278 Gene3D G3DSA:3.40.50.720 1 277 4.0E-74 T 13-10-2018 P40_13745 a37605ceef1490f3f188fe0fb8353b92 879 Gene3D G3DSA:1.10.1060.10 372 444 1.2E-11 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P40_13745 a37605ceef1490f3f188fe0fb8353b92 879 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 752 194.768 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 P40_13745 a37605ceef1490f3f188fe0fb8353b92 879 Pfam PF13375 RnfC Barrel sandwich hybrid domain 15 116 2.5E-37 T 13-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain P40_13745 a37605ceef1490f3f188fe0fb8353b92 879 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 284 3.3E-47 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_13745 a37605ceef1490f3f188fe0fb8353b92 879 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 14 446 1.6E-183 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 P40_13745 a37605ceef1490f3f188fe0fb8353b92 879 SUPERFAMILY SSF142019 95 304 4.58E-60 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_13745 a37605ceef1490f3f188fe0fb8353b92 879 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P40_13745 a37605ceef1490f3f188fe0fb8353b92 879 SUPERFAMILY SSF46548 334 444 6.63E-19 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P40_13745 a37605ceef1490f3f188fe0fb8353b92 879 Gene3D G3DSA:3.40.50.11540 145 272 3.7E-11 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_13745 a37605ceef1490f3f188fe0fb8353b92 879 Pfam PF13237 4Fe-4S dicluster domain 375 428 5.6E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain P40_13745 a37605ceef1490f3f188fe0fb8353b92 879 Pfam PF10531 SLBB domain 298 345 6.5E-11 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_06170 a8d8ad86f928c5c89f408d6926c85d79 387 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 88 108 5.5E-14 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 P40_06170 a8d8ad86f928c5c89f408d6926c85d79 387 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 67 82 5.5E-14 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 P40_06170 a8d8ad86f928c5c89f408d6926c85d79 387 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 110 130 5.5E-14 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 P40_06170 a8d8ad86f928c5c89f408d6926c85d79 387 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 190 212 5.5E-14 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 P40_06170 a8d8ad86f928c5c89f408d6926c85d79 387 Gene3D G3DSA:3.90.380.10 165 246 4.1E-5 T 13-10-2018 P40_06170 a8d8ad86f928c5c89f408d6926c85d79 387 Pfam PF00355 Rieske [2Fe-2S] domain 54 134 1.3E-17 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 P40_06170 a8d8ad86f928c5c89f408d6926c85d79 387 SUPERFAMILY SSF55961 172 375 6.99E-33 T 13-10-2018 P40_06170 a8d8ad86f928c5c89f408d6926c85d79 387 Gene3D G3DSA:3.90.380.10 253 387 5.7E-11 T 13-10-2018 P40_06170 a8d8ad86f928c5c89f408d6926c85d79 387 SUPERFAMILY SSF50022 29 167 5.76E-37 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_06170 a8d8ad86f928c5c89f408d6926c85d79 387 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 195 378 2.6E-26 T 13-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 P40_06170 a8d8ad86f928c5c89f408d6926c85d79 387 Gene3D G3DSA:2.102.10.10 51 164 7.2E-30 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_17870 1cf4a435f287ffa2c295c0a38d79e852 136 SUPERFAMILY SSF54523 9 119 6.2E-19 T 13-10-2018 P40_17870 1cf4a435f287ffa2c295c0a38d79e852 136 Gene3D G3DSA:3.30.700.10 9 135 1.1E-22 T 13-10-2018 P40_17870 1cf4a435f287ffa2c295c0a38d79e852 136 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 30 101 3.2E-14 T 13-10-2018 IPR031982 Type IV minor pilin ComP P40_17870 1cf4a435f287ffa2c295c0a38d79e852 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 2.0E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_17870 1cf4a435f287ffa2c295c0a38d79e852 136 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 5.7E-9 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 P40_17870 1cf4a435f287ffa2c295c0a38d79e852 136 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 5.7E-9 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 P40_17870 1cf4a435f287ffa2c295c0a38d79e852 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_17870 1cf4a435f287ffa2c295c0a38d79e852 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 3.2E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_00255 9ef6444033fc1c8586dae1e1b28f39de 238 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 15 235 5.8E-52 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 P40_00255 9ef6444033fc1c8586dae1e1b28f39de 238 PIRSF PIRSF015601 1 238 5.1E-54 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 P40_00255 9ef6444033fc1c8586dae1e1b28f39de 238 Pfam PF04452 RNA methyltransferase 20 235 3.7E-67 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 P40_00255 9ef6444033fc1c8586dae1e1b28f39de 238 SUPERFAMILY SSF75217 73 237 1.66E-47 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases P40_00255 9ef6444033fc1c8586dae1e1b28f39de 238 Gene3D G3DSA:3.40.1280.10 72 238 1.3E-49 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal P40_00255 9ef6444033fc1c8586dae1e1b28f39de 238 SUPERFAMILY SSF88697 1 66 3.73E-16 T 13-10-2018 IPR015947 PUA-like superfamily P40_00255 9ef6444033fc1c8586dae1e1b28f39de 238 Gene3D G3DSA:2.40.240.20 1 67 1.1E-18 T 13-10-2018 P40_12990 2f2514c4006d4f868e0702bb1b3cdcad 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 4 122 4.1E-42 T 13-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12990 2f2514c4006d4f868e0702bb1b3cdcad 124 SUPERFAMILY SSF81343 4 124 1.94E-34 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12990 2f2514c4006d4f868e0702bb1b3cdcad 124 PIRSF PIRSF000178 1 124 2.3E-32 T 13-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12990 2f2514c4006d4f868e0702bb1b3cdcad 124 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 80 93 - T 13-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12990 2f2514c4006d4f868e0702bb1b3cdcad 124 Gene3D G3DSA:1.20.1300.10 1 124 7.3E-45 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12990 2f2514c4006d4f868e0702bb1b3cdcad 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 118 3.2E-32 T 13-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12990 2f2514c4006d4f868e0702bb1b3cdcad 124 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 13-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_15270 1a77301ea669f3fdb42322f4600a9ed4 733 Pfam PF10282 Lactonase, 7-bladed beta-propeller 184 276 5.3E-10 T 13-10-2018 IPR019405 Lactonase, 7-bladed beta propeller P40_15270 1a77301ea669f3fdb42322f4600a9ed4 733 Pfam PF10282 Lactonase, 7-bladed beta-propeller 286 457 1.0E-10 T 13-10-2018 IPR019405 Lactonase, 7-bladed beta propeller P40_15270 1a77301ea669f3fdb42322f4600a9ed4 733 Pfam PF10282 Lactonase, 7-bladed beta-propeller 487 639 1.9E-14 T 13-10-2018 IPR019405 Lactonase, 7-bladed beta propeller P40_15270 1a77301ea669f3fdb42322f4600a9ed4 733 Gene3D G3DSA:2.130.10.10 43 282 6.2E-30 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_15270 1a77301ea669f3fdb42322f4600a9ed4 733 Gene3D G3DSA:2.130.10.10 629 731 4.7E-9 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_15270 1a77301ea669f3fdb42322f4600a9ed4 733 Gene3D G3DSA:2.130.10.10 283 383 4.4E-9 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_15270 1a77301ea669f3fdb42322f4600a9ed4 733 Gene3D G3DSA:2.130.10.10 384 462 1.4E-8 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_15270 1a77301ea669f3fdb42322f4600a9ed4 733 SUPERFAMILY SSF75011 46 261 1.09E-19 T 13-10-2018 P40_15270 1a77301ea669f3fdb42322f4600a9ed4 733 SUPERFAMILY SSF75011 188 459 4.58E-26 T 13-10-2018 P40_15270 1a77301ea669f3fdb42322f4600a9ed4 733 Gene3D G3DSA:2.130.10.10 463 628 2.6E-25 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_15270 1a77301ea669f3fdb42322f4600a9ed4 733 SUPERFAMILY SSF50974 386 729 5.49E-30 T 13-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 P40_05160 56280c900eaa021a8c107707cbfc1015 575 SUPERFAMILY SSF52091 455 567 2.16E-18 T 13-10-2018 IPR036513 STAS domain superfamily P40_05160 56280c900eaa021a8c107707cbfc1015 575 Gene3D G3DSA:3.30.750.24 434 567 3.3E-29 T 13-10-2018 IPR036513 STAS domain superfamily P40_05160 56280c900eaa021a8c107707cbfc1015 575 TIGRFAM TIGR00815 sulP: sulfate permease 8 549 4.5E-127 T 13-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 P40_05160 56280c900eaa021a8c107707cbfc1015 575 Pfam PF01740 STAS domain 456 561 1.0E-17 T 13-10-2018 IPR002645 STAS domain P40_05160 56280c900eaa021a8c107707cbfc1015 575 Pfam PF00916 Sulfate permease family 23 404 6.3E-97 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 P40_13870 7330b278ab2c830add3eba5ae43ca5fb 452 SUPERFAMILY SSF56112 98 320 9.36E-29 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_13870 7330b278ab2c830add3eba5ae43ca5fb 452 Pfam PF01636 Phosphotransferase enzyme family 287 314 1.4E-5 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase P40_13870 7330b278ab2c830add3eba5ae43ca5fb 452 Pfam PF03109 ABC1 family 114 224 1.4E-30 T 13-10-2018 IPR004147 UbiB domain P40_02530 40e06f38bd5abbb0be784b217e497d62 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 186 1.1E-11 T 13-10-2018 P40_02530 40e06f38bd5abbb0be784b217e497d62 219 SUPERFAMILY SSF56784 3 214 1.05E-38 T 13-10-2018 IPR036412 HAD-like superfamily P40_02530 40e06f38bd5abbb0be784b217e497d62 219 Gene3D G3DSA:3.40.50.1000 8 201 1.3E-22 T 13-10-2018 IPR023214 HAD superfamily P40_02530 40e06f38bd5abbb0be784b217e497d62 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 89 186 1.2E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_10650 9ec0a8f500a5b3072e5d9c0fe810bd3e 493 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 313 327 - T 13-10-2018 IPR001482 Type II/IV secretion system protein P40_10650 9ec0a8f500a5b3072e5d9c0fe810bd3e 493 Gene3D G3DSA:3.40.50.300 219 493 1.4E-118 T 13-10-2018 P40_10650 9ec0a8f500a5b3072e5d9c0fe810bd3e 493 Gene3D G3DSA:3.30.300.160 3 85 9.8E-6 T 13-10-2018 P40_10650 9ec0a8f500a5b3072e5d9c0fe810bd3e 493 Pfam PF00437 Type II/IV secretion system protein 120 385 2.8E-91 T 13-10-2018 IPR001482 Type II/IV secretion system protein P40_10650 9ec0a8f500a5b3072e5d9c0fe810bd3e 493 SUPERFAMILY SSF160246 10 73 3.4E-13 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily P40_10650 9ec0a8f500a5b3072e5d9c0fe810bd3e 493 SMART SM00382 246 388 3.1E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_10650 9ec0a8f500a5b3072e5d9c0fe810bd3e 493 SUPERFAMILY SSF52540 104 490 2.38E-98 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10650 9ec0a8f500a5b3072e5d9c0fe810bd3e 493 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 11 490 5.7E-215 T 13-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 P40_10650 9ec0a8f500a5b3072e5d9c0fe810bd3e 493 Gene3D G3DSA:3.30.450.90 86 218 5.9E-52 T 13-10-2018 P40_06295 44e5732bfb2278873c3962252df1b7cf 115 Gene3D G3DSA:2.170.150.70 3 114 2.4E-32 T 13-10-2018 P40_06295 44e5732bfb2278873c3962252df1b7cf 115 SUPERFAMILY SSF51316 1 113 2.82E-32 T 13-10-2018 IPR011057 Mss4-like superfamily P40_06295 44e5732bfb2278873c3962252df1b7cf 115 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 99 1.6E-9 T 13-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 Gene3D G3DSA:3.40.50.300 369 554 1.7E-41 T 13-10-2018 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 Pfam PF07724 AAA domain (Cdc48 subfamily) 607 775 9.3E-43 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 SUPERFAMILY SSF52540 556 851 1.0E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 SUPERFAMILY SSF81923 11 126 2.88E-19 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 227 339 9.2E-10 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 611 629 1.3E-34 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 656 674 1.3E-34 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 685 703 1.3E-34 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 718 732 1.3E-34 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 782 854 2.0E-10 T 13-10-2018 IPR019489 Clp ATPase, C-terminal P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 Gene3D G3DSA:3.40.50.300 173 366 2.6E-64 T 13-10-2018 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 SUPERFAMILY SSF52540 183 508 5.72E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 318 330 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 865 0.0 T 13-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 Gene3D G3DSA:1.10.1780.10 1 159 1.5E-46 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 SMART SM00382 607 774 2.5E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 SMART SM00382 222 367 3.5E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 Gene3D G3DSA:3.40.50.300 560 779 3.0E-68 T 13-10-2018 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 23 70 5.3E-7 T 13-10-2018 IPR004176 Clp, N-terminal P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 111 130 3.5 T 13-10-2018 IPR004176 Clp, N-terminal P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 Gene3D G3DSA:1.10.8.60 781 877 5.2E-11 T 13-10-2018 P40_10580 dfa7ec65e6579bd22e2227f39ad3e6eb 900 SMART SM01086 781 874 3.7E-9 T 13-10-2018 IPR019489 Clp ATPase, C-terminal P40_20760 ea427e6d8af89b2f386aa206de91473a 247 PRINTS PR00160 Glutaredoxin signature 215 228 2.2E-10 T 13-10-2018 IPR014025 Glutaredoxin subgroup P40_20760 ea427e6d8af89b2f386aa206de91473a 247 PRINTS PR00160 Glutaredoxin signature 229 242 2.2E-10 T 13-10-2018 IPR014025 Glutaredoxin subgroup P40_20760 ea427e6d8af89b2f386aa206de91473a 247 PRINTS PR00160 Glutaredoxin signature 173 191 2.2E-10 T 13-10-2018 IPR014025 Glutaredoxin subgroup P40_20760 ea427e6d8af89b2f386aa206de91473a 247 Gene3D G3DSA:3.40.30.10 171 243 1.2E-19 T 13-10-2018 P40_20760 ea427e6d8af89b2f386aa206de91473a 247 Pfam PF00462 Glutaredoxin 173 232 1.5E-14 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 P40_20760 ea427e6d8af89b2f386aa206de91473a 247 Pfam PF08534 Redoxin 6 160 2.7E-33 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 P40_20760 ea427e6d8af89b2f386aa206de91473a 247 SUPERFAMILY SSF52833 5 241 1.68E-41 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_20760 ea427e6d8af89b2f386aa206de91473a 247 Gene3D G3DSA:3.40.30.10 4 165 2.1E-61 T 13-10-2018 P40_20760 ea427e6d8af89b2f386aa206de91473a 247 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 P40_01535 075f1afc999ba500eff1fce3c0779356 304 PIRSF PIRSF018266 2 304 9.0E-68 T 13-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component P40_01535 075f1afc999ba500eff1fce3c0779356 304 Pfam PF04773 FecR protein 95 186 6.3E-20 T 13-10-2018 IPR006860 FecR protein P40_01535 075f1afc999ba500eff1fce3c0779356 304 Gene3D G3DSA:2.60.120.1440 90 221 8.8E-21 T 13-10-2018 P40_01535 075f1afc999ba500eff1fce3c0779356 304 Pfam PF16220 Domain of unknown function (DUF4880) 9 52 1.8E-7 T 13-10-2018 IPR032623 FecR, N-terminal P40_19640 e9099d13b99a4bfe4288c16982f43a33 208 Pfam PF00857 Isochorismatase family 14 165 3.7E-23 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 P40_19640 e9099d13b99a4bfe4288c16982f43a33 208 Gene3D G3DSA:3.40.50.850 1 208 2.8E-61 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_19640 e9099d13b99a4bfe4288c16982f43a33 208 SUPERFAMILY SSF52499 4 202 1.83E-53 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_06100 4e3050e688b889eb147b3811a3e6b26e 334 Pfam PF12852 Cupin 19 209 5.2E-34 T 13-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain P40_06100 4e3050e688b889eb147b3811a3e6b26e 334 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 308 324 8.0E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_06100 4e3050e688b889eb147b3811a3e6b26e 334 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 293 308 8.0E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_06100 4e3050e688b889eb147b3811a3e6b26e 334 Pfam PF12833 Helix-turn-helix domain 247 325 2.8E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_06100 4e3050e688b889eb147b3811a3e6b26e 334 SUPERFAMILY SSF46689 224 275 3.67E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06100 4e3050e688b889eb147b3811a3e6b26e 334 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 278 320 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 P40_06100 4e3050e688b889eb147b3811a3e6b26e 334 Gene3D G3DSA:1.10.10.60 226 331 5.9E-27 T 13-10-2018 P40_06100 4e3050e688b889eb147b3811a3e6b26e 334 SUPERFAMILY SSF51182 46 125 3.63E-6 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_06100 4e3050e688b889eb147b3811a3e6b26e 334 SMART SM00342 241 324 9.6E-33 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_06100 4e3050e688b889eb147b3811a3e6b26e 334 SUPERFAMILY SSF46689 277 326 3.36E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_19025 5f0a2782b1448b97a807b94dbf609fd9 413 Gene3D G3DSA:3.20.20.140 62 356 6.5E-87 T 13-10-2018 P40_19025 5f0a2782b1448b97a807b94dbf609fd9 413 Gene3D G3DSA:2.30.40.10 18 370 6.5E-87 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_19025 5f0a2782b1448b97a807b94dbf609fd9 413 SUPERFAMILY SSF51338 4 372 8.31E-7 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_19025 5f0a2782b1448b97a807b94dbf609fd9 413 SUPERFAMILY SSF51556 61 357 1.32E-65 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_19025 5f0a2782b1448b97a807b94dbf609fd9 413 Pfam PF01979 Amidohydrolase family 59 369 6.4E-47 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P40_03000 6e22617adfc85eeb3dfa22e96868d79d 257 SUPERFAMILY SSF56112 63 233 8.29E-9 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_03000 6e22617adfc85eeb3dfa22e96868d79d 257 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 33 233 4.2E-26 T 13-10-2018 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 325 8.6E-63 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 Gene3D G3DSA:3.30.1490.20 131 203 1.2E-22 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 Pfam PF02785 Biotin carboxylase C-terminal domain 342 453 2.9E-30 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 SUPERFAMILY SSF52440 2 112 2.66E-40 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 SUPERFAMILY SSF52096 580 838 1.26E-52 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 514 531 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 Gene3D G3DSA:3.30.470.20 204 464 6.5E-94 T 13-10-2018 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 Gene3D G3DSA:2.40.50.100 490 558 1.9E-16 T 13-10-2018 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 Pfam PF01039 Carboxyl transferase domain 605 1079 1.2E-77 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 SUPERFAMILY SSF51246 338 457 1.33E-30 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 Gene3D G3DSA:3.90.226.10 837 1075 1.6E-72 T 13-10-2018 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 SUPERFAMILY SSF52096 844 1090 3.91E-64 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 Pfam PF00364 Biotin-requiring enzyme 492 555 1.0E-14 T 13-10-2018 IPR000089 Biotin/lipoyl attachment P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 110 6.7E-40 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 Gene3D G3DSA:3.40.50.20 3 130 2.0E-50 T 13-10-2018 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 SMART SM00878 342 452 3.2E-44 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 SUPERFAMILY SSF56059 83 328 9.19E-61 T 13-10-2018 P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 SUPERFAMILY SSF51230 483 558 1.16E-17 T 13-10-2018 IPR011053 Single hybrid motif P40_02625 f562b2adf402d529fc88dfe0ec9d473d 1098 Gene3D G3DSA:3.90.226.10 574 835 2.9E-71 T 13-10-2018 P40_03150 b4501cee55066c5a4161d7310e8e9615 506 Gene3D G3DSA:3.30.300.310 405 503 3.3E-31 T 13-10-2018 P40_03150 b4501cee55066c5a4161d7310e8e9615 506 Pfam PF00501 AMP-binding enzyme 8 407 8.9E-85 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_03150 b4501cee55066c5a4161d7310e8e9615 506 ProSitePatterns PS00455 Putative AMP-binding domain signature. 152 163 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_03150 b4501cee55066c5a4161d7310e8e9615 506 Pfam PF13193 AMP-binding enzyme C-terminal domain 416 488 2.2E-19 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_03150 b4501cee55066c5a4161d7310e8e9615 506 Gene3D G3DSA:3.40.50.12780 1 404 1.1E-94 T 13-10-2018 P40_03150 b4501cee55066c5a4161d7310e8e9615 506 SUPERFAMILY SSF56801 2 500 3.4E-129 T 13-10-2018 P40_10595 5d158e79b9c1d41ea06cea60083f0042 477 ProSitePatterns PS00018 EF-hand calcium-binding domain. 37 49 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site P40_13605 b24738f5e379afce8c3743b3e5a25cf3 502 Gene3D G3DSA:3.40.1090.10 134 231 2.1E-13 T 13-10-2018 P40_13605 b24738f5e379afce8c3743b3e5a25cf3 502 Gene3D G3DSA:3.40.1090.10 232 368 7.4E-14 T 13-10-2018 P40_13605 b24738f5e379afce8c3743b3e5a25cf3 502 Pfam PF11815 Domain of unknown function (DUF3336) 5 136 1.4E-36 T 13-10-2018 IPR021771 Triacylglycerol lipase GO:0004806|GO:0006629 P40_13605 b24738f5e379afce8c3743b3e5a25cf3 502 SUPERFAMILY SSF52151 143 473 1.99E-55 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase P40_13605 b24738f5e379afce8c3743b3e5a25cf3 502 Pfam PF01734 Patatin-like phospholipase 145 328 7.5E-25 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 P40_14610 9ac28c3249bb1674fd776ac32f144abb 97 Pfam PF04221 RelB antitoxin 5 55 1.2E-13 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ P40_14610 9ac28c3249bb1674fd776ac32f144abb 97 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 56 2.3E-14 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ P40_14610 9ac28c3249bb1674fd776ac32f144abb 97 Gene3D G3DSA:1.10.1220.10 3 51 4.6E-11 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 P40_03330 8d39c36f4f98c264757c02fe31acc336 265 Gene3D G3DSA:1.10.12.10 210 265 1.8E-22 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_03330 8d39c36f4f98c264757c02fe31acc336 265 SUPERFAMILY SSF52096 11 264 4.98E-76 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_03330 8d39c36f4f98c264757c02fe31acc336 265 Gene3D G3DSA:3.90.226.10 10 208 5.6E-62 T 13-10-2018 P40_03330 8d39c36f4f98c264757c02fe31acc336 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 264 2.3E-51 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 750 771 - T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 294 365 7.5E-23 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 Gene3D G3DSA:3.20.70.20 220 915 5.6E-248 T 13-10-2018 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 SUPERFAMILY SSF48168 153 369 9.68E-64 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 SUPERFAMILY SSF51998 370 907 3.02E-180 T 13-10-2018 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 Pfam PF03477 ATP cone domain 149 233 8.5E-9 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 Pfam PF03477 ATP cone domain 33 128 9.3E-19 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 297 908 2.4E-216 T 13-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 PRINTS PR01183 Ribonucleotide reductase large chain signature 446 465 1.5E-48 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 PRINTS PR01183 Ribonucleotide reductase large chain signature 760 787 1.5E-48 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 PRINTS PR01183 Ribonucleotide reductase large chain signature 656 678 1.5E-48 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 PRINTS PR01183 Ribonucleotide reductase large chain signature 684 707 1.5E-48 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 PRINTS PR01183 Ribonucleotide reductase large chain signature 581 592 1.5E-48 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 PRINTS PR01183 Ribonucleotide reductase large chain signature 618 641 1.5E-48 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P40_15340 a9063c1ed8f8e0c19e40167d770f4811 958 Pfam PF02867 Ribonucleotide reductase, barrel domain 371 905 3.0E-182 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P40_00115 a4ebce9cf7f7727f7d2d9cefd4911a8b 223 SUPERFAMILY SSF56529 17 215 6.54E-63 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 P40_00115 a4ebce9cf7f7727f7d2d9cefd4911a8b 223 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 21 217 2.6E-51 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 P40_00115 a4ebce9cf7f7727f7d2d9cefd4911a8b 223 Gene3D G3DSA:3.90.850.10 3 222 6.2E-70 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 P40_16390 e9153bc3c8588de2d104a8180e1a7e96 316 Gene3D G3DSA:3.20.20.70 166 316 3.5E-32 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_16390 e9153bc3c8588de2d104a8180e1a7e96 316 TIGRFAM TIGR00586 mutt: mutator mutT protein 11 133 1.1E-30 T 13-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 P40_16390 e9153bc3c8588de2d104a8180e1a7e96 316 Pfam PF14815 NUDIX domain 15 129 2.0E-19 T 13-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 P40_16390 e9153bc3c8588de2d104a8180e1a7e96 316 SUPERFAMILY SSF55811 8 130 6.5E-39 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 P40_16390 e9153bc3c8588de2d104a8180e1a7e96 316 PRINTS PR00502 NUDIX hydrolase family signature 54 69 2.0E-7 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 P40_16390 e9153bc3c8588de2d104a8180e1a7e96 316 PRINTS PR00502 NUDIX hydrolase family signature 40 54 2.0E-7 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 P40_16390 e9153bc3c8588de2d104a8180e1a7e96 316 Pfam PF02581 Thiamine monophosphate synthase 178 310 1.6E-23 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 P40_16390 e9153bc3c8588de2d104a8180e1a7e96 316 Gene3D G3DSA:3.90.79.10 8 134 4.5E-36 T 13-10-2018 P40_16390 e9153bc3c8588de2d104a8180e1a7e96 316 ProSitePatterns PS00893 Nudix box signature. 45 66 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 P40_16390 e9153bc3c8588de2d104a8180e1a7e96 316 SUPERFAMILY SSF51391 122 312 1.29E-31 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 P40_06310 ee4e066b7e134a9fd2ca216ac89ebf59 410 SUPERFAMILY SSF89796 3 406 1.44E-149 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_06310 ee4e066b7e134a9fd2ca216ac89ebf59 410 Gene3D G3DSA:3.30.1540.10 243 334 7.0E-153 T 13-10-2018 P40_06310 ee4e066b7e134a9fd2ca216ac89ebf59 410 Pfam PF02515 CoA-transferase family III 5 383 8.8E-137 T 13-10-2018 IPR003673 CoA-transferase family III GO:0003824 P40_06310 ee4e066b7e134a9fd2ca216ac89ebf59 410 Gene3D G3DSA:3.40.50.10540 5 401 7.0E-153 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_21475 5471ab0374dcab1f4851fd2f25245559 423 SUPERFAMILY SSF51338 1 72 3.73E-18 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_21475 5471ab0374dcab1f4851fd2f25245559 423 Pfam PF01979 Amidohydrolase family 286 375 2.1E-7 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P40_21475 5471ab0374dcab1f4851fd2f25245559 423 PIRSF PIRSF039004 1 422 2.8E-119 T 13-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 P40_21475 5471ab0374dcab1f4851fd2f25245559 423 SUPERFAMILY SSF51556 59 359 2.38E-45 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_21475 5471ab0374dcab1f4851fd2f25245559 423 Gene3D G3DSA:3.20.20.140 63 303 3.1E-64 T 13-10-2018 P40_21475 5471ab0374dcab1f4851fd2f25245559 423 Gene3D G3DSA:2.30.40.10 320 413 2.9E-9 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_21475 5471ab0374dcab1f4851fd2f25245559 423 Gene3D G3DSA:2.30.40.10 3 62 2.8E-5 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_12830 4d8c2dadcca2a9425911a51b127f90e9 368 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 P40_12830 4d8c2dadcca2a9425911a51b127f90e9 368 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.119 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 P40_12830 4d8c2dadcca2a9425911a51b127f90e9 368 Gene3D G3DSA:3.60.150.10 1 363 1.3E-156 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 P40_12830 4d8c2dadcca2a9425911a51b127f90e9 368 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 P40_12830 4d8c2dadcca2a9425911a51b127f90e9 368 SUPERFAMILY SSF103263 4 351 6.02E-147 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 P40_12830 4d8c2dadcca2a9425911a51b127f90e9 368 Pfam PF01264 Chorismate synthase 10 345 3.0E-138 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 P40_12830 4d8c2dadcca2a9425911a51b127f90e9 368 PIRSF PIRSF001456 3 360 2.4E-138 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 P40_12830 4d8c2dadcca2a9425911a51b127f90e9 368 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 9.0E-136 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 P40_12830 4d8c2dadcca2a9425911a51b127f90e9 368 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 P40_06180 912be8a019b9d4059f733da4aa482994 326 Gene3D G3DSA:3.20.20.100 1 323 1.0E-121 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_06180 912be8a019b9d4059f733da4aa482994 326 Pfam PF00248 Aldo/keto reductase family 15 317 5.4E-77 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain P40_06180 912be8a019b9d4059f733da4aa482994 326 PRINTS PR00069 Aldo-keto reductase signature 144 161 9.1E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_06180 912be8a019b9d4059f733da4aa482994 326 PRINTS PR00069 Aldo-keto reductase signature 47 71 9.1E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_06180 912be8a019b9d4059f733da4aa482994 326 PRINTS PR00069 Aldo-keto reductase signature 113 131 9.1E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_06180 912be8a019b9d4059f733da4aa482994 326 SUPERFAMILY SSF51430 1 322 3.27E-105 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_08320 35645f47049361e256f1fdf752fed935 457 Gene3D G3DSA:3.40.120.10 250 365 5.1E-35 T 13-10-2018 P40_08320 35645f47049361e256f1fdf752fed935 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 8.3E-24 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08320 35645f47049361e256f1fdf752fed935 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 98 112 8.3E-24 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08320 35645f47049361e256f1fdf752fed935 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 169 188 8.3E-24 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08320 35645f47049361e256f1fdf752fed935 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 203 216 8.3E-24 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08320 35645f47049361e256f1fdf752fed935 457 SUPERFAMILY SSF53738 257 355 1.69E-29 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08320 35645f47049361e256f1fdf752fed935 457 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 9 137 3.6E-37 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08320 35645f47049361e256f1fdf752fed935 457 Gene3D G3DSA:3.40.120.10 1 151 2.6E-54 T 13-10-2018 P40_08320 35645f47049361e256f1fdf752fed935 457 Gene3D G3DSA:3.40.120.10 171 248 1.9E-33 T 13-10-2018 P40_08320 35645f47049361e256f1fdf752fed935 457 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 99 108 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08320 35645f47049361e256f1fdf752fed935 457 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 354 2.5E-19 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08320 35645f47049361e256f1fdf752fed935 457 Gene3D G3DSA:3.30.310.50 368 456 1.1E-22 T 13-10-2018 P40_08320 35645f47049361e256f1fdf752fed935 457 SUPERFAMILY SSF53738 153 254 1.61E-31 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08320 35645f47049361e256f1fdf752fed935 457 SUPERFAMILY SSF53738 5 133 5.1E-38 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08320 35645f47049361e256f1fdf752fed935 457 SUPERFAMILY SSF55957 368 453 6.63E-20 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08320 35645f47049361e256f1fdf752fed935 457 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 449 8.3E-10 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08320 35645f47049361e256f1fdf752fed935 457 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 155 252 2.1E-27 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_08285 26470fdc82cc2dffbac87d0e7dd0a96b 389 SUPERFAMILY SSF53901 16 236 4.81E-20 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_08285 26470fdc82cc2dffbac87d0e7dd0a96b 389 SUPERFAMILY SSF53901 258 377 3.24E-23 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_08285 26470fdc82cc2dffbac87d0e7dd0a96b 389 PIRSF PIRSF000429 4 379 4.3E-23 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_08285 26470fdc82cc2dffbac87d0e7dd0a96b 389 Pfam PF02803 Thiolase, C-terminal domain 258 372 1.7E-6 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_08285 26470fdc82cc2dffbac87d0e7dd0a96b 389 Gene3D G3DSA:3.40.47.10 6 389 5.6E-102 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_06215 b277fc2bee1c9fe49cd20a17bf4166a9 252 SUPERFAMILY SSF56436 21 251 2.12E-37 T 13-10-2018 IPR016187 C-type lectin fold P40_06215 b277fc2bee1c9fe49cd20a17bf4166a9 252 Pfam PF03781 Sulfatase-modifying factor enzyme 1 42 249 8.0E-26 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 P40_06215 b277fc2bee1c9fe49cd20a17bf4166a9 252 Gene3D G3DSA:3.90.1580.10 19 251 9.1E-31 T 13-10-2018 P40_00675 87ad4d83d8219f9871b61c129e56b461 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 6.8E-25 T 13-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 P40_00675 87ad4d83d8219f9871b61c129e56b461 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 269 4.0E-81 T 13-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 P40_00675 87ad4d83d8219f9871b61c129e56b461 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 117 192 1.4E-8 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase P40_00675 87ad4d83d8219f9871b61c129e56b461 272 Gene3D G3DSA:3.40.50.720 116 237 6.5E-81 T 13-10-2018 P40_00675 87ad4d83d8219f9871b61c129e56b461 272 Gene3D G3DSA:3.40.50.10860 5 256 6.5E-81 T 13-10-2018 P40_00675 87ad4d83d8219f9871b61c129e56b461 272 SUPERFAMILY SSF53223 2 101 2.01E-32 T 13-10-2018 P40_00675 87ad4d83d8219f9871b61c129e56b461 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 271 32.283 T 13-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 P40_00675 87ad4d83d8219f9871b61c129e56b461 272 SUPERFAMILY SSF51735 102 270 4.88E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_02365 81fdcbf1e8266355b787d745af0232af 466 SUPERFAMILY SSF53383 109 464 2.24E-83 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_02365 81fdcbf1e8266355b787d745af0232af 466 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 3.7E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_02365 81fdcbf1e8266355b787d745af0232af 466 Pfam PF00155 Aminotransferase class I and II 125 438 9.7E-20 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_02365 81fdcbf1e8266355b787d745af0232af 466 SMART SM00345 17 76 3.0E-11 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_02365 81fdcbf1e8266355b787d745af0232af 466 Gene3D G3DSA:3.40.640.10 105 459 1.5E-109 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_02365 81fdcbf1e8266355b787d745af0232af 466 Gene3D G3DSA:1.10.10.10 13 90 5.7E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_02365 81fdcbf1e8266355b787d745af0232af 466 SUPERFAMILY SSF46785 9 83 1.34E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_09125 9117daa5a72ca51e59368c6955ae71b9 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 376 53.101 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 P40_09125 9117daa5a72ca51e59368c6955ae71b9 376 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 98 136 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 P40_09125 9117daa5a72ca51e59368c6955ae71b9 376 Gene3D G3DSA:3.30.70.360 180 293 6.3E-136 T 13-10-2018 P40_09125 9117daa5a72ca51e59368c6955ae71b9 376 SUPERFAMILY SSF53187 4 374 2.62E-70 T 13-10-2018 P40_09125 9117daa5a72ca51e59368c6955ae71b9 376 SUPERFAMILY SSF55031 180 289 1.21E-30 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain P40_09125 9117daa5a72ca51e59368c6955ae71b9 376 Pfam PF01546 Peptidase family M20/M25/M40 64 373 2.4E-44 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 P40_09125 9117daa5a72ca51e59368c6955ae71b9 376 Pfam PF07687 Peptidase dimerisation domain 176 283 1.7E-25 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain P40_09125 9117daa5a72ca51e59368c6955ae71b9 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 374 2.2E-167 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 P40_09125 9117daa5a72ca51e59368c6955ae71b9 376 Gene3D G3DSA:3.40.630.10 9 363 6.3E-136 T 13-10-2018 P40_13065 b7f3383fea2a9f7d6f12e01a2f92b26b 249 SMART SM00893 23 211 2.1E-69 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 P40_13065 b7f3383fea2a9f7d6f12e01a2f92b26b 249 PIRSF PIRSF000090 1 249 5.1E-84 T 13-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 P40_13065 b7f3383fea2a9f7d6f12e01a2f92b26b 249 Gene3D G3DSA:3.40.50.620 1 247 1.8E-89 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_13065 b7f3383fea2a9f7d6f12e01a2f92b26b 249 SUPERFAMILY SSF52402 1 242 1.19E-86 T 13-10-2018 P40_13065 b7f3383fea2a9f7d6f12e01a2f92b26b 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 13-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 P40_13065 b7f3383fea2a9f7d6f12e01a2f92b26b 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 3.5E-46 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 P40_11910 be0748426759ad2b9b534af8617fd12a 474 SUPERFAMILY SSF56672 26 218 2.13E-29 T 13-10-2018 P40_11910 be0748426759ad2b9b534af8617fd12a 474 Gene3D G3DSA:1.10.150.20 166 216 1.8E-7 T 13-10-2018 P40_11910 be0748426759ad2b9b534af8617fd12a 474 Pfam PF00817 impB/mucB/samB family 29 143 1.1E-5 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 P40_11910 be0748426759ad2b9b534af8617fd12a 474 Gene3D G3DSA:2.30.40.20 30 67 1.8E-7 T 13-10-2018 P40_11910 be0748426759ad2b9b534af8617fd12a 474 Gene3D G3DSA:3.30.70.270 68 165 1.8E-7 T 13-10-2018 P40_11395 36b2bec38c7b5152f842050cdf0dbc50 362 Gene3D G3DSA:1.10.3720.10 119 349 3.9E-21 T 13-10-2018 IPR035906 MetI-like superfamily P40_11395 36b2bec38c7b5152f842050cdf0dbc50 362 SUPERFAMILY SSF161098 123 340 8.37E-18 T 13-10-2018 IPR035906 MetI-like superfamily P40_11395 36b2bec38c7b5152f842050cdf0dbc50 362 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 148 355 6.8E-37 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_11960 cf1c2c7d5c79595ca284696b3d224a1c 318 ProSitePatterns PS00958 Transaldolase active site. 127 144 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 P40_11960 cf1c2c7d5c79595ca284696b3d224a1c 318 Gene3D G3DSA:3.20.20.70 1 316 3.4E-115 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_11960 cf1c2c7d5c79595ca284696b3d224a1c 318 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 P40_11960 cf1c2c7d5c79595ca284696b3d224a1c 318 SUPERFAMILY SSF51569 1 313 1.26E-93 T 13-10-2018 P40_11960 cf1c2c7d5c79595ca284696b3d224a1c 318 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 309 2.7E-84 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 P40_21565 b2874a67a48480723ad90bd2a1ae702d 74 Hamap MF_01396 ATP synthase subunit c [atpH]. 6 71 14.278 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21565 b2874a67a48480723ad90bd2a1ae702d 74 PRINTS PR00124 ATP synthase C subunit signature 46 71 1.8E-10 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21565 b2874a67a48480723ad90bd2a1ae702d 74 PRINTS PR00124 ATP synthase C subunit signature 29 44 1.8E-10 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21565 b2874a67a48480723ad90bd2a1ae702d 74 PRINTS PR00124 ATP synthase C subunit signature 8 27 1.8E-10 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21565 b2874a67a48480723ad90bd2a1ae702d 74 SUPERFAMILY SSF81333 4 73 1.96E-18 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily P40_21565 b2874a67a48480723ad90bd2a1ae702d 74 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 16 73 1.1E-28 T 13-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 P40_21565 b2874a67a48480723ad90bd2a1ae702d 74 Pfam PF00137 ATP synthase subunit C 7 69 1.7E-11 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 P40_21565 b2874a67a48480723ad90bd2a1ae702d 74 ProSitePatterns PS00605 ATP synthase c subunit signature. 36 57 - T 13-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21565 b2874a67a48480723ad90bd2a1ae702d 74 Gene3D G3DSA:1.20.20.10 1 74 1.2E-29 T 13-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_15670 7319491e136a006872fbeb65862badd5 316 SUPERFAMILY SSF55073 186 309 1.33E-7 T 13-10-2018 IPR029787 Nucleotide cyclase P40_15670 7319491e136a006872fbeb65862badd5 316 SMART SM00267 169 311 0.0029 T 13-10-2018 IPR000160 GGDEF domain P40_15670 7319491e136a006872fbeb65862badd5 316 Pfam PF00990 Diguanylate cyclase, GGDEF domain 222 275 7.3E-5 T 13-10-2018 IPR000160 GGDEF domain P40_15670 7319491e136a006872fbeb65862badd5 316 Gene3D G3DSA:3.30.70.270 173 305 4.7E-5 T 13-10-2018 P40_05010 149180eca285905449eafdadd1d990af 203 SUPERFAMILY SSF52507 4 200 1.15E-57 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 P40_05010 149180eca285905449eafdadd1d990af 203 Gene3D G3DSA:3.40.50.1950 1 202 4.0E-76 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 P40_05010 149180eca285905449eafdadd1d990af 203 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 4 198 2.2E-58 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like P40_05010 149180eca285905449eafdadd1d990af 203 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 3 200 35.297 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like P40_05010 149180eca285905449eafdadd1d990af 203 Pfam PF02441 Flavoprotein 4 179 1.4E-25 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 P40_18650 9bfccc692b2bedeba101bcafcb9525fd 89 SUPERFAMILY SSF47060 3 89 8.24E-35 T 13-10-2018 IPR009068 S15/NS1, RNA-binding P40_18650 9bfccc692b2bedeba101bcafcb9525fd 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 3.0E-29 T 13-10-2018 P40_18650 9bfccc692b2bedeba101bcafcb9525fd 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.508 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18650 9bfccc692b2bedeba101bcafcb9525fd 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18650 9bfccc692b2bedeba101bcafcb9525fd 89 Gene3D G3DSA:1.10.287.10 2 89 1.7E-35 T 13-10-2018 P40_18650 9bfccc692b2bedeba101bcafcb9525fd 89 Pfam PF00312 Ribosomal protein S15 8 88 6.7E-37 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18650 9bfccc692b2bedeba101bcafcb9525fd 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 5.8E-38 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18650 9bfccc692b2bedeba101bcafcb9525fd 89 SMART SM01387 8 88 1.8E-50 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_19320 70fb9506d25473478fcded708ccf0adb 716 SMART SM00965 306 354 2.7E-10 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 P40_19320 70fb9506d25473478fcded708ccf0adb 716 Gene3D G3DSA:3.55.50.30 264 378 5.1E-43 T 13-10-2018 P40_19320 70fb9506d25473478fcded708ccf0adb 716 Gene3D G3DSA:3.30.1370.120 379 445 5.9E-12 T 13-10-2018 IPR038591 NolW-like superfamily P40_19320 70fb9506d25473478fcded708ccf0adb 716 PRINTS PR00811 Bacterial general secretion pathway protein D signature 674 692 6.1E-19 T 13-10-2018 IPR001775 GspD/PilQ family P40_19320 70fb9506d25473478fcded708ccf0adb 716 PRINTS PR00811 Bacterial general secretion pathway protein D signature 552 576 6.1E-19 T 13-10-2018 IPR001775 GspD/PilQ family P40_19320 70fb9506d25473478fcded708ccf0adb 716 PRINTS PR00811 Bacterial general secretion pathway protein D signature 697 711 6.1E-19 T 13-10-2018 IPR001775 GspD/PilQ family P40_19320 70fb9506d25473478fcded708ccf0adb 716 PRINTS PR00811 Bacterial general secretion pathway protein D signature 446 456 6.1E-19 T 13-10-2018 IPR001775 GspD/PilQ family P40_19320 70fb9506d25473478fcded708ccf0adb 716 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 281 710 9.1E-150 T 13-10-2018 IPR013355 Type IV pilus secretin PilQ P40_19320 70fb9506d25473478fcded708ccf0adb 716 Pfam PF00263 Bacterial type II and III secretion system protein 556 710 2.5E-48 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 P40_19320 70fb9506d25473478fcded708ccf0adb 716 Gene3D G3DSA:2.60.40.3470 137 263 5.4E-32 T 13-10-2018 P40_19320 70fb9506d25473478fcded708ccf0adb 716 Pfam PF03958 Bacterial type II/III secretion system short domain 380 446 8.8E-13 T 13-10-2018 IPR005644 NolW-like P40_19320 70fb9506d25473478fcded708ccf0adb 716 Pfam PF07660 Secretin and TonB N terminus short domain 307 353 2.7E-8 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 P40_19320 70fb9506d25473478fcded708ccf0adb 716 Pfam PF11741 AMIN domain 48 133 1.6E-6 T 13-10-2018 IPR021731 AMIN domain P40_10625 464d84f65f0b244f7434df30bfde034d 1222 SUPERFAMILY SSF52172 829 945 2.99E-28 T 13-10-2018 IPR011006 CheY-like superfamily P40_10625 464d84f65f0b244f7434df30bfde034d 1222 SMART SM00065 284 428 2.9E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 SUPERFAMILY SSF52172 956 1069 1.71E-21 T 13-10-2018 IPR011006 CheY-like superfamily P40_10625 464d84f65f0b244f7434df30bfde034d 1222 Gene3D G3DSA:3.30.450.40 265 423 1.0E-19 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_10625 464d84f65f0b244f7434df30bfde034d 1222 SMART SM00388 552 620 2.3E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 Gene3D G3DSA:3.40.50.2300 954 1080 2.2E-22 T 13-10-2018 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 667 791 3.3E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_10625 464d84f65f0b244f7434df30bfde034d 1222 Gene3D G3DSA:3.40.50.12740 833 953 1.8E-31 T 13-10-2018 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 Gene3D G3DSA:3.40.50.12740 1101 1222 1.1E-41 T 13-10-2018 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 SMART SM00304 208 260 4.1E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 Gene3D G3DSA:1.10.287.130 518 618 2.7E-24 T 13-10-2018 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 SUPERFAMILY SSF55781 250 419 2.4E-26 T 13-10-2018 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 SUPERFAMILY SSF47384 535 622 4.12E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 SUPERFAMILY SSF158472 208 259 7.19E-10 T 13-10-2018 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 Pfam PF00512 His Kinase A (phospho-acceptor) domain 553 620 6.9E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 SUPERFAMILY SSF52172 1099 1221 1.22E-37 T 13-10-2018 IPR011006 CheY-like superfamily P40_10625 464d84f65f0b244f7434df30bfde034d 1222 Pfam PF00072 Response regulator receiver domain 1105 1215 1.1E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 Pfam PF00072 Response regulator receiver domain 959 1061 4.8E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 Pfam PF00072 Response regulator receiver domain 836 943 1.5E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 SUPERFAMILY SSF55874 609 789 3.71E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_10625 464d84f65f0b244f7434df30bfde034d 1222 Pfam PF00672 HAMP domain 208 257 5.2E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 Gene3D G3DSA:1.20.1480.50 176 264 3.1E-15 T 13-10-2018 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 SMART SM00387 667 792 1.4E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_10625 464d84f65f0b244f7434df30bfde034d 1222 Gene3D G3DSA:3.30.565.10 619 792 2.8E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_10625 464d84f65f0b244f7434df30bfde034d 1222 PRINTS PR00344 Bacterial sensor protein C-terminal signature 751 769 4.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 PRINTS PR00344 Bacterial sensor protein C-terminal signature 716 730 4.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 PRINTS PR00344 Bacterial sensor protein C-terminal signature 776 789 4.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 PRINTS PR00344 Bacterial sensor protein C-terminal signature 734 744 4.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 Pfam PF13185 GAF domain 284 419 3.3E-15 T 13-10-2018 IPR003018 GAF domain GO:0005515 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 SMART SM00448 834 944 5.5E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 SMART SM00448 956 1070 1.1E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_10625 464d84f65f0b244f7434df30bfde034d 1222 SMART SM00448 1102 1216 2.4E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_02420 037467cbb0f0f188bbed8194c1fcc26a 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 162 5.6E-24 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_02420 037467cbb0f0f188bbed8194c1fcc26a 171 Pfam PF04542 Sigma-70 region 2 12 78 4.3E-12 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_02420 037467cbb0f0f188bbed8194c1fcc26a 171 SUPERFAMILY SSF88659 103 163 1.09E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_02420 037467cbb0f0f188bbed8194c1fcc26a 171 Gene3D G3DSA:1.10.10.10 92 166 3.6E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_02420 037467cbb0f0f188bbed8194c1fcc26a 171 Gene3D G3DSA:1.10.1740.10 2 78 1.2E-8 T 13-10-2018 P40_02420 037467cbb0f0f188bbed8194c1fcc26a 171 Pfam PF08281 Sigma-70, region 4 110 161 8.2E-14 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_02420 037467cbb0f0f188bbed8194c1fcc26a 171 SUPERFAMILY SSF88946 10 96 1.29E-12 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_18280 41b724a04f8435e8c1a9578461e21956 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.571 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18280 41b724a04f8435e8c1a9578461e21956 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 6.5E-43 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18280 41b724a04f8435e8c1a9578461e21956 124 Gene3D G3DSA:2.40.50.140 1 124 1.1E-63 T 13-10-2018 P40_18280 41b724a04f8435e8c1a9578461e21956 124 SUPERFAMILY SSF50249 3 123 1.43E-52 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_18280 41b724a04f8435e8c1a9578461e21956 124 PIRSF PIRSF002133 1 124 1.7E-54 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18280 41b724a04f8435e8c1a9578461e21956 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 3.4E-69 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18280 41b724a04f8435e8c1a9578461e21956 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18280 41b724a04f8435e8c1a9578461e21956 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.5E-61 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18280 41b724a04f8435e8c1a9578461e21956 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.5E-61 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18280 41b724a04f8435e8c1a9578461e21956 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.5E-61 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18280 41b724a04f8435e8c1a9578461e21956 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.5E-61 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18280 41b724a04f8435e8c1a9578461e21956 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.5E-61 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18280 41b724a04f8435e8c1a9578461e21956 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.5E-61 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_19555 2b6f21768ad53383dddfe2a052e520ba 491 Gene3D G3DSA:3.50.50.60 1 165 4.7E-37 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_19555 2b6f21768ad53383dddfe2a052e520ba 491 Gene3D G3DSA:3.50.50.60 166 239 1.4E-13 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_19555 2b6f21768ad53383dddfe2a052e520ba 491 Pfam PF00743 Flavin-binding monooxygenase-like 88 227 4.8E-12 T 13-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 P40_19555 2b6f21768ad53383dddfe2a052e520ba 491 SUPERFAMILY SSF51905 14 396 9.17E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_19555 2b6f21768ad53383dddfe2a052e520ba 491 Gene3D G3DSA:3.50.50.60 332 439 4.4E-9 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_19555 2b6f21768ad53383dddfe2a052e520ba 491 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 190 215 2.6E-7 T 13-10-2018 P40_19555 2b6f21768ad53383dddfe2a052e520ba 491 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 2.6E-7 T 13-10-2018 P40_19555 2b6f21768ad53383dddfe2a052e520ba 491 Pfam PF13450 NAD(P)-binding Rossmann-like domain 17 67 2.8E-7 T 13-10-2018 P40_18950 3f017672da7303b4b96aba2196f39f19 271 Gene3D G3DSA:3.40.50.10310 11 261 7.4E-69 T 13-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 P40_18950 3f017672da7303b4b96aba2196f39f19 271 Pfam PF02633 Creatinine amidohydrolase 17 255 3.1E-64 T 13-10-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 P40_18950 3f017672da7303b4b96aba2196f39f19 271 SUPERFAMILY SSF102215 12 261 3.4E-72 T 13-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 P40_16775 bb52b7343eb736f826bde72b9368973f 316 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 9 304 8.6E-62 T 13-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 P40_16775 bb52b7343eb736f826bde72b9368973f 316 Gene3D G3DSA:1.20.58.1130 9 197 6.3E-78 T 13-10-2018 P40_16775 bb52b7343eb736f826bde72b9368973f 316 Gene3D G3DSA:1.20.1420.30 35 301 6.3E-78 T 13-10-2018 P40_16775 bb52b7343eb736f826bde72b9368973f 316 Pfam PF01699 Sodium/calcium exchanger protein 166 309 9.4E-29 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 P40_16775 bb52b7343eb736f826bde72b9368973f 316 Pfam PF01699 Sodium/calcium exchanger protein 5 142 2.0E-21 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 P40_15330 7a72486d704dafa85672016e54a36bcf 537 Pfam PF00512 His Kinase A (phospho-acceptor) domain 310 374 7.9E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_15330 7a72486d704dafa85672016e54a36bcf 537 SMART SM00304 256 308 6.4E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_15330 7a72486d704dafa85672016e54a36bcf 537 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 528 5.5E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_15330 7a72486d704dafa85672016e54a36bcf 537 SMART SM00387 417 529 5.5E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_15330 7a72486d704dafa85672016e54a36bcf 537 SUPERFAMILY SSF47384 292 374 1.77E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_15330 7a72486d704dafa85672016e54a36bcf 537 SUPERFAMILY SSF158472 259 307 4.84E-7 T 13-10-2018 P40_15330 7a72486d704dafa85672016e54a36bcf 537 SMART SM00388 309 374 1.2E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_15330 7a72486d704dafa85672016e54a36bcf 537 SUPERFAMILY SSF55874 363 527 4.85E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_15330 7a72486d704dafa85672016e54a36bcf 537 Pfam PF00672 HAMP domain 260 305 1.2E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_15330 7a72486d704dafa85672016e54a36bcf 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 482 3.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_15330 7a72486d704dafa85672016e54a36bcf 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 3.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_15330 7a72486d704dafa85672016e54a36bcf 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 3.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_15330 7a72486d704dafa85672016e54a36bcf 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 468 3.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_15330 7a72486d704dafa85672016e54a36bcf 537 Gene3D G3DSA:1.10.287.130 261 375 2.6E-26 T 13-10-2018 P40_15330 7a72486d704dafa85672016e54a36bcf 537 Gene3D G3DSA:3.30.565.10 385 535 3.1E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_16660 fe08c5aaea609f712b176895ca0f06c9 1128 SUPERFAMILY SSF52540 430 871 9.06E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_16660 fe08c5aaea609f712b176895ca0f06c9 1128 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 1124 0.0 T 13-10-2018 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type P40_16660 fe08c5aaea609f712b176895ca0f06c9 1128 Gene3D G3DSA:1.10.3210.30 90 170 8.7E-8 T 13-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily P40_17250 c35894e618d522a994ef91b147ed6409 373 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 369 1.0E-154 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 P40_17250 c35894e618d522a994ef91b147ed6409 373 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 362 1.5E-87 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 P40_17250 c35894e618d522a994ef91b147ed6409 373 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 369 4.2E-161 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 P40_17250 c35894e618d522a994ef91b147ed6409 373 Gene3D G3DSA:3.20.20.105 1 369 2.9E-160 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 P40_17250 c35894e618d522a994ef91b147ed6409 373 SUPERFAMILY SSF51713 1 365 5.62E-156 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 P40_17250 c35894e618d522a994ef91b147ed6409 373 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 365 55.063 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 P40_05245 a54a72894b929f82bccc720cf2343541 322 Gene3D G3DSA:3.60.10.10 41 317 1.5E-29 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily P40_05245 a54a72894b929f82bccc720cf2343541 322 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 45 308 6.7E-13 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase P40_05245 a54a72894b929f82bccc720cf2343541 322 SUPERFAMILY SSF56219 40 313 1.44E-31 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily P40_00470 5fabe0c8d31bee2f0af99e98f0ee0fdf 307 Pfam PF00682 HMGL-like 5 275 2.5E-42 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 P40_00470 5fabe0c8d31bee2f0af99e98f0ee0fdf 307 SUPERFAMILY SSF51569 1 289 9.52E-63 T 13-10-2018 P40_00470 5fabe0c8d31bee2f0af99e98f0ee0fdf 307 Gene3D G3DSA:3.20.20.70 1 297 5.7E-104 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_00470 5fabe0c8d31bee2f0af99e98f0ee0fdf 307 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_16320 0851137a66e2bf4a4936e8ac27478cb8 729 Pfam PF07793 Protein of unknown function (DUF1631) 21 723 2.2E-201 T 13-10-2018 IPR012434 Protein of unknown function DUF1631 P40_06145 da36a8bd1ba79c73aa5f3e39c9d399a6 205 SUPERFAMILY SSF52833 1 75 1.42E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_06145 da36a8bd1ba79c73aa5f3e39c9d399a6 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 194 2.0E-12 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal P40_06145 da36a8bd1ba79c73aa5f3e39c9d399a6 205 Gene3D G3DSA:1.20.1050.10 81 198 5.3E-40 T 13-10-2018 P40_06145 da36a8bd1ba79c73aa5f3e39c9d399a6 205 SUPERFAMILY SSF47616 76 197 3.55E-31 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_06145 da36a8bd1ba79c73aa5f3e39c9d399a6 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 7.9E-14 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_06145 da36a8bd1ba79c73aa5f3e39c9d399a6 205 Gene3D G3DSA:3.40.30.10 1 79 8.9E-25 T 13-10-2018 P40_14165 28764a345ad6e4028379e7b047ab925b 337 Gene3D G3DSA:3.20.20.70 10 336 1.0E-87 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_14165 28764a345ad6e4028379e7b047ab925b 337 SUPERFAMILY SSF51412 9 332 2.75E-57 T 13-10-2018 P40_14165 28764a345ad6e4028379e7b047ab925b 337 Pfam PF03060 Nitronate monooxygenase 12 324 1.0E-47 T 13-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 P40_00535 3db9adc0027a008de52da1e2ea67b3bd 481 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal P40_00535 3db9adc0027a008de52da1e2ea67b3bd 481 Gene3D G3DSA:3.40.50.620 3 206 3.1E-73 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_00535 3db9adc0027a008de52da1e2ea67b3bd 481 Pfam PF00875 DNA photolyase 3 169 2.2E-44 T 13-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 P40_00535 3db9adc0027a008de52da1e2ea67b3bd 481 Pfam PF03441 FAD binding domain of DNA photolyase 275 466 5.4E-78 T 13-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 P40_00535 3db9adc0027a008de52da1e2ea67b3bd 481 Gene3D G3DSA:1.25.40.80 131 289 3.1E-73 T 13-10-2018 P40_00535 3db9adc0027a008de52da1e2ea67b3bd 481 PRINTS PR00147 DNA photolyase signature 325 341 4.0E-28 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 P40_00535 3db9adc0027a008de52da1e2ea67b3bd 481 PRINTS PR00147 DNA photolyase signature 384 398 4.0E-28 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 P40_00535 3db9adc0027a008de52da1e2ea67b3bd 481 PRINTS PR00147 DNA photolyase signature 142 158 4.0E-28 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 P40_00535 3db9adc0027a008de52da1e2ea67b3bd 481 PRINTS PR00147 DNA photolyase signature 345 363 4.0E-28 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 P40_00535 3db9adc0027a008de52da1e2ea67b3bd 481 SUPERFAMILY SSF52425 2 175 9.29E-49 T 13-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 P40_00535 3db9adc0027a008de52da1e2ea67b3bd 481 SUPERFAMILY SSF48173 196 470 2.62E-100 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 P40_00535 3db9adc0027a008de52da1e2ea67b3bd 481 Gene3D G3DSA:1.10.579.10 293 472 2.9E-73 T 13-10-2018 P40_00895 b4e67d13ec2a064b4a54af73d82eabff 223 Pfam PF00156 Phosphoribosyl transferase domain 39 159 5.6E-12 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 P40_00895 b4e67d13ec2a064b4a54af73d82eabff 223 Gene3D G3DSA:3.40.50.2020 1 222 2.2E-72 T 13-10-2018 P40_00895 b4e67d13ec2a064b4a54af73d82eabff 223 SUPERFAMILY SSF53271 1 206 3.41E-44 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like P40_00895 b4e67d13ec2a064b4a54af73d82eabff 223 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 12 194 6.3E-57 T 13-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_00895 b4e67d13ec2a064b4a54af73d82eabff 223 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 223 31.89 T 13-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_13355 00769917b9dc670761fa46420555b4cb 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 44 56 3.9E-57 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 P40_13355 00769917b9dc670761fa46420555b4cb 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 262 287 3.9E-57 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 P40_13355 00769917b9dc670761fa46420555b4cb 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 3.9E-57 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 P40_13355 00769917b9dc670761fa46420555b4cb 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 117 144 3.9E-57 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 P40_13355 00769917b9dc670761fa46420555b4cb 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 95 117 3.9E-57 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 P40_13355 00769917b9dc670761fa46420555b4cb 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 240 262 3.9E-57 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 P40_13355 00769917b9dc670761fa46420555b4cb 290 Pfam PF01842 ACT domain 10 53 6.4E-10 T 13-10-2018 IPR002912 ACT domain P40_13355 00769917b9dc670761fa46420555b4cb 290 SUPERFAMILY SSF53328 94 288 8.37E-59 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P40_13355 00769917b9dc670761fa46420555b4cb 290 PIRSF PIRSF036480 6 289 2.8E-114 T 13-10-2018 P40_13355 00769917b9dc670761fa46420555b4cb 290 Gene3D G3DSA:3.30.70.260 7 93 3.7E-26 T 13-10-2018 P40_13355 00769917b9dc670761fa46420555b4cb 290 Gene3D G3DSA:3.40.50.170 94 289 1.8E-71 T 13-10-2018 P40_13355 00769917b9dc670761fa46420555b4cb 290 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 288 2.9E-121 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 P40_13355 00769917b9dc670761fa46420555b4cb 290 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 288 46.271 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 P40_13355 00769917b9dc670761fa46420555b4cb 290 SUPERFAMILY SSF55021 9 90 3.28E-17 T 13-10-2018 P40_13355 00769917b9dc670761fa46420555b4cb 290 Pfam PF00551 Formyl transferase 94 270 1.1E-40 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P40_03095 8393c8abe65a11ee7a3fa29eac3f42b7 209 Gene3D G3DSA:3.90.79.10 2 208 6.3E-57 T 13-10-2018 P40_03095 8393c8abe65a11ee7a3fa29eac3f42b7 209 Pfam PF00293 NUDIX domain 54 175 9.6E-9 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 P40_03095 8393c8abe65a11ee7a3fa29eac3f42b7 209 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 13 197 2.2E-41 T 13-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 P40_03095 8393c8abe65a11ee7a3fa29eac3f42b7 209 SUPERFAMILY SSF55811 15 200 4.33E-42 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 P40_13350 402a7de6612d03e964fc3c346215a21b 346 Gene3D G3DSA:3.30.70.2810 6 76 1.4E-15 T 13-10-2018 P40_13350 402a7de6612d03e964fc3c346215a21b 346 Gene3D G3DSA:3.40.50.150 170 344 1.4E-45 T 13-10-2018 P40_13350 402a7de6612d03e964fc3c346215a21b 346 Pfam PF01728 FtsJ-like methyltransferase 180 268 4.5E-8 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 P40_13350 402a7de6612d03e964fc3c346215a21b 346 Gene3D G3DSA:3.30.2300.20 79 165 7.6E-15 T 13-10-2018 P40_13350 402a7de6612d03e964fc3c346215a21b 346 SUPERFAMILY SSF53335 179 271 2.23E-14 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_19175 cc9cd6c75ce12124e4591dd95ed34f23 412 SUPERFAMILY SSF56645 4 263 4.19E-60 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_19175 cc9cd6c75ce12124e4591dd95ed34f23 412 Gene3D G3DSA:2.40.110.10 135 250 1.9E-45 T 13-10-2018 P40_19175 cc9cd6c75ce12124e4591dd95ed34f23 412 Gene3D G3DSA:1.10.540.10 5 133 1.2E-43 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_19175 cc9cd6c75ce12124e4591dd95ed34f23 412 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 132 2.3E-10 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_19175 cc9cd6c75ce12124e4591dd95ed34f23 412 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 238 2.0E-20 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_19175 cc9cd6c75ce12124e4591dd95ed34f23 412 SUPERFAMILY SSF47203 248 406 3.7E-40 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_19175 cc9cd6c75ce12124e4591dd95ed34f23 412 Gene3D G3DSA:1.20.140.10 251 410 4.2E-37 T 13-10-2018 P40_19175 cc9cd6c75ce12124e4591dd95ed34f23 412 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 250 400 1.4E-32 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 558 620 1.5E-22 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 624 0.0 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 Gene3D G3DSA:3.30.565.10 2 215 2.4E-72 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 8.6E-116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 8.6E-116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 8.6E-116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 8.6E-116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 8.6E-116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 8.6E-116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 8.6E-116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 8.6E-116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 8.6E-116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 8.6E-116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 8.6E-116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 8.6E-116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 8.6E-116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 8.6E-116 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 SUPERFAMILY SSF56719 388 621 6.28E-77 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 SMART SM00387 27 173 2.0E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 138 1.1E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 628 46.476 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 SUPERFAMILY SSF55874 5 214 3.93E-63 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 Gene3D G3DSA:3.40.50.670 390 623 4.7E-88 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 Pfam PF01751 Toprim domain 413 512 9.3E-12 T 13-10-2018 IPR006171 TOPRIM domain P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 SMART SM00433 34 624 2.1E-204 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 SUPERFAMILY SSF54211 217 382 1.1E-45 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 Gene3D G3DSA:3.30.230.10 216 389 1.1E-55 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 Pfam PF00204 DNA gyrase B 218 384 2.1E-40 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR00418 DNA topoisomerase II family signature 266 279 5.3E-59 T 13-10-2018 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR00418 DNA topoisomerase II family signature 517 529 5.3E-59 T 13-10-2018 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR00418 DNA topoisomerase II family signature 66 79 5.3E-59 T 13-10-2018 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR00418 DNA topoisomerase II family signature 109 123 5.3E-59 T 13-10-2018 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR00418 DNA topoisomerase II family signature 414 428 5.3E-59 T 13-10-2018 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR00418 DNA topoisomerase II family signature 31 46 5.3E-59 T 13-10-2018 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR00418 DNA topoisomerase II family signature 497 514 5.3E-59 T 13-10-2018 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR00418 DNA topoisomerase II family signature 562 578 5.3E-59 T 13-10-2018 P40_03180 9796332f8f75905873548b1dd7c5cb2d 628 PRINTS PR00418 DNA topoisomerase II family signature 479 495 5.3E-59 T 13-10-2018 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 Gene3D G3DSA:1.10.150.20 356 425 1.7E-28 T 13-10-2018 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 Pfam PF14520 Helix-hairpin-helix domain 436 490 1.9E-9 T 13-10-2018 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 Gene3D G3DSA:3.30.1480.10 1 132 6.7E-41 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 Gene3D G3DSA:3.30.300.20 281 349 1.2E-20 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta P40_18670 20acd15a3cf070be41c2107c3d56815a 501 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 346 8.3E-120 T 13-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 444 493 3.9E-17 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication P40_18670 20acd15a3cf070be41c2107c3d56815a 501 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 5.3E-20 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication P40_18670 20acd15a3cf070be41c2107c3d56815a 501 SUPERFAMILY SSF69705 1 129 3.66E-37 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 Pfam PF13184 NusA-like KH domain 233 299 9.9E-28 T 13-10-2018 IPR025249 KH domain, NusA-like GO:0003723 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 Gene3D G3DSA:1.10.150.20 435 493 1.8E-22 T 13-10-2018 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 Pfam PF00575 S1 RNA binding domain 135 198 1.0E-6 T 13-10-2018 IPR003029 S1 domain GO:0003676 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 SMART SM00322 233 296 5.4 T 13-10-2018 IPR004087 K Homology domain GO:0003676 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 SMART SM00322 304 418 0.6 T 13-10-2018 IPR004087 K Homology domain GO:0003676 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 Pfam PF08529 NusA N-terminal domain 4 126 1.9E-36 T 13-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 SUPERFAMILY SSF50249 135 202 3.35E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_18670 20acd15a3cf070be41c2107c3d56815a 501 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 28.574 T 13-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 Gene3D G3DSA:3.30.300.20 202 280 8.2E-31 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta P40_18670 20acd15a3cf070be41c2107c3d56815a 501 SUPERFAMILY SSF47794 360 420 5.81E-17 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 Gene3D G3DSA:2.40.50.140 138 201 5.9E-18 T 13-10-2018 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 SMART SM00316 136 203 4.6E-9 T 13-10-2018 IPR022967 RNA-binding domain, S1 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 SUPERFAMILY SSF54814 204 281 3.14E-29 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 SUPERFAMILY SSF47794 433 494 2.51E-16 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 P40_18670 20acd15a3cf070be41c2107c3d56815a 501 SUPERFAMILY SSF54814 282 347 3.47E-12 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 P40_08950 30649a3e4337dae51168b582c04c3084 299 SUPERFAMILY SSF53474 9 287 7.12E-53 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_08950 30649a3e4337dae51168b582c04c3084 299 Pfam PF00561 alpha/beta hydrolase fold 23 273 3.8E-17 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_08950 30649a3e4337dae51168b582c04c3084 299 Gene3D G3DSA:3.40.50.1820 1 285 5.0E-56 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_08950 30649a3e4337dae51168b582c04c3084 299 PRINTS PR00412 Epoxide hydrolase signature 48 63 2.1E-17 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_08950 30649a3e4337dae51168b582c04c3084 299 PRINTS PR00412 Epoxide hydrolase signature 262 284 2.1E-17 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_08950 30649a3e4337dae51168b582c04c3084 299 PRINTS PR00412 Epoxide hydrolase signature 28 46 2.1E-17 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_08950 30649a3e4337dae51168b582c04c3084 299 PRINTS PR00412 Epoxide hydrolase signature 92 105 2.1E-17 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_08950 30649a3e4337dae51168b582c04c3084 299 PRINTS PR00412 Epoxide hydrolase signature 226 242 2.1E-17 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_10185 e57f20670ba73eda4c8341eb10bf34ce 126 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 33 117 5.4E-26 T 13-10-2018 IPR019110 Uncharacterised protein family, RAQPRD P40_03155 484b51723cd2d21a50b372ea6f0b0b6c 394 Pfam PF02803 Thiolase, C-terminal domain 265 360 1.7E-9 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_03155 484b51723cd2d21a50b372ea6f0b0b6c 394 SUPERFAMILY SSF53901 16 386 6.61E-44 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_03155 484b51723cd2d21a50b372ea6f0b0b6c 394 PIRSF PIRSF000429 2 389 4.8E-62 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_03155 484b51723cd2d21a50b372ea6f0b0b6c 394 Pfam PF00108 Thiolase, N-terminal domain 8 230 1.5E-26 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 P40_03155 484b51723cd2d21a50b372ea6f0b0b6c 394 Gene3D G3DSA:3.40.47.10 7 392 2.8E-105 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_19300 aba2257d6f677bc67a2ce36c5aba37f6 1487 SUPERFAMILY SSF51395 455 1193 2.61E-251 T 13-10-2018 P40_19300 aba2257d6f677bc67a2ce36c5aba37f6 1487 Pfam PF00310 Glutamine amidotransferases class-II 21 433 2.9E-169 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain P40_19300 aba2257d6f677bc67a2ce36c5aba37f6 1487 SUPERFAMILY SSF69336 1217 1472 2.75E-91 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 P40_19300 aba2257d6f677bc67a2ce36c5aba37f6 1487 Gene3D G3DSA:3.20.20.70 489 1176 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_19300 aba2257d6f677bc67a2ce36c5aba37f6 1487 Pfam PF01645 Conserved region in glutamate synthase 798 1161 2.9E-151 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 P40_19300 aba2257d6f677bc67a2ce36c5aba37f6 1487 Gene3D G3DSA:3.60.20.10 21 551 0.0 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P40_19300 aba2257d6f677bc67a2ce36c5aba37f6 1487 Gene3D G3DSA:2.160.20.60 1197 1475 8.0E-106 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 P40_19300 aba2257d6f677bc67a2ce36c5aba37f6 1487 SUPERFAMILY SSF56235 21 436 5.06E-144 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P40_19300 aba2257d6f677bc67a2ce36c5aba37f6 1487 Gene3D G3DSA:3.20.20.70 438 797 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_19300 aba2257d6f677bc67a2ce36c5aba37f6 1487 Pfam PF01493 GXGXG motif 1241 1428 1.7E-79 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 P40_19300 aba2257d6f677bc67a2ce36c5aba37f6 1487 Pfam PF04898 Glutamate synthase central domain 463 741 2.0E-104 T 13-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 P40_00975 14a422221046d21f0e3c7b47deec3a56 390 SMART SM00382 202 356 6.7E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_00975 14a422221046d21f0e3c7b47deec3a56 390 SUPERFAMILY SSF52540 56 361 5.35E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_00975 14a422221046d21f0e3c7b47deec3a56 390 Pfam PF00437 Type II/IV secretion system protein 79 354 6.6E-80 T 13-10-2018 IPR001482 Type II/IV secretion system protein P40_00975 14a422221046d21f0e3c7b47deec3a56 390 Gene3D G3DSA:3.30.450.380 3 173 5.7E-41 T 13-10-2018 P40_00975 14a422221046d21f0e3c7b47deec3a56 390 Gene3D G3DSA:3.40.50.300 175 388 8.0E-63 T 13-10-2018 P40_07040 8d788c23e9364c9863d87ee53012bfcc 328 Gene3D G3DSA:1.20.58.410 1 71 1.4E-17 T 13-10-2018 P40_07040 8d788c23e9364c9863d87ee53012bfcc 328 Gene3D G3DSA:3.30.70.1660 85 321 6.6E-87 T 13-10-2018 P40_07040 8d788c23e9364c9863d87ee53012bfcc 328 SUPERFAMILY SSF75620 1 325 9.42E-118 T 13-10-2018 P40_07040 8d788c23e9364c9863d87ee53012bfcc 328 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 326 2.1E-141 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 P40_07040 8d788c23e9364c9863d87ee53012bfcc 328 Pfam PF03462 PCRF domain 1 175 2.6E-50 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 P40_07040 8d788c23e9364c9863d87ee53012bfcc 328 Pfam PF00472 RF-1 domain 183 300 2.0E-35 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 P40_07040 8d788c23e9364c9863d87ee53012bfcc 328 Gene3D G3DSA:3.30.160.20 181 284 6.6E-87 T 13-10-2018 P40_07040 8d788c23e9364c9863d87ee53012bfcc 328 SMART SM00937 40 150 2.8E-55 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 P40_07040 8d788c23e9364c9863d87ee53012bfcc 328 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 200 216 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 P40_07040 8d788c23e9364c9863d87ee53012bfcc 328 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 328 33.863 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 P40_11665 a73427fccab48448e78347dfd402d370 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 111 121 7.2E-6 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 P40_11665 a73427fccab48448e78347dfd402d370 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 69 80 7.2E-6 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 P40_11665 a73427fccab48448e78347dfd402d370 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 248 260 7.2E-6 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 P40_11665 a73427fccab48448e78347dfd402d370 382 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 374 382 7.2E-6 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 P40_11665 a73427fccab48448e78347dfd402d370 382 Gene3D G3DSA:2.40.160.10 32 382 1.9E-48 T 13-10-2018 IPR023614 Porin domain superfamily P40_11665 a73427fccab48448e78347dfd402d370 382 SUPERFAMILY SSF56935 33 382 1.47E-42 T 13-10-2018 P40_11665 a73427fccab48448e78347dfd402d370 382 Pfam PF13609 Gram-negative porin 5 349 1.1E-31 T 13-10-2018 P40_17900 9edbf99e8b57b3991a287cec892175b8 311 Gene3D G3DSA:3.40.1010.20 97 197 1.5E-107 T 13-10-2018 P40_17900 9edbf99e8b57b3991a287cec892175b8 311 Pfam PF02401 LytB protein 3 283 3.2E-88 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 P40_17900 9edbf99e8b57b3991a287cec892175b8 311 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 2.8E-97 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 P40_17900 9edbf99e8b57b3991a287cec892175b8 311 Gene3D G3DSA:3.40.1010.20 6 283 1.5E-107 T 13-10-2018 P40_17900 9edbf99e8b57b3991a287cec892175b8 311 Gene3D G3DSA:3.40.50.11270 12 96 1.5E-107 T 13-10-2018 P40_17900 9edbf99e8b57b3991a287cec892175b8 311 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 37.599 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 P40_03540 53d08eaf72abab1ca9a7d6939bd1ed5c 163 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 159 21.441 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_03540 53d08eaf72abab1ca9a7d6939bd1ed5c 163 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 16 149 3.1E-36 T 13-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_03540 53d08eaf72abab1ca9a7d6939bd1ed5c 163 SUPERFAMILY SSF52121 10 153 4.32E-44 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_03540 53d08eaf72abab1ca9a7d6939bd1ed5c 163 Gene3D G3DSA:3.40.50.960 8 160 2.8E-48 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_18745 821e4a25cf21741e729706ac189c804f 377 SUPERFAMILY SSF57938 135 211 2.22E-21 T 13-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily P40_18745 821e4a25cf21741e729706ac189c804f 377 Gene3D G3DSA:1.10.287.110 1 114 7.7E-38 T 13-10-2018 IPR036869 Chaperone J-domain superfamily P40_18745 821e4a25cf21741e729706ac189c804f 377 Gene3D G3DSA:2.60.260.20 118 250 2.1E-37 T 13-10-2018 P40_18745 821e4a25cf21741e729706ac189c804f 377 Gene3D G3DSA:2.60.260.20 255 362 7.9E-29 T 13-10-2018 P40_18745 821e4a25cf21741e729706ac189c804f 377 SMART SM00271 4 62 6.5E-32 T 13-10-2018 IPR001623 DnaJ domain P40_18745 821e4a25cf21741e729706ac189c804f 377 SUPERFAMILY SSF46565 1 111 2.09E-37 T 13-10-2018 IPR036869 Chaperone J-domain superfamily P40_18745 821e4a25cf21741e729706ac189c804f 377 Pfam PF00684 DnaJ central domain 148 208 5.0E-14 T 13-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 P40_18745 821e4a25cf21741e729706ac189c804f 377 SUPERFAMILY SSF49493 114 267 7.72E-22 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 P40_18745 821e4a25cf21741e729706ac189c804f 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 42.404 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 P40_18745 821e4a25cf21741e729706ac189c804f 377 PRINTS PR00625 DnaJ domain signature 25 40 1.5E-32 T 13-10-2018 IPR001623 DnaJ domain P40_18745 821e4a25cf21741e729706ac189c804f 377 PRINTS PR00625 DnaJ domain signature 62 81 1.5E-32 T 13-10-2018 IPR001623 DnaJ domain P40_18745 821e4a25cf21741e729706ac189c804f 377 PRINTS PR00625 DnaJ domain signature 42 62 1.5E-32 T 13-10-2018 IPR001623 DnaJ domain P40_18745 821e4a25cf21741e729706ac189c804f 377 PRINTS PR00625 DnaJ domain signature 7 25 1.5E-32 T 13-10-2018 IPR001623 DnaJ domain P40_18745 821e4a25cf21741e729706ac189c804f 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 13-10-2018 IPR018253 DnaJ domain, conserved site P40_18745 821e4a25cf21741e729706ac189c804f 377 Pfam PF00226 DnaJ domain 5 67 3.3E-27 T 13-10-2018 IPR001623 DnaJ domain P40_18745 821e4a25cf21741e729706ac189c804f 377 Gene3D G3DSA:2.10.230.10 148 208 2.1E-37 T 13-10-2018 P40_18745 821e4a25cf21741e729706ac189c804f 377 SUPERFAMILY SSF49493 260 345 3.01E-24 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 P40_18745 821e4a25cf21741e729706ac189c804f 377 Pfam PF01556 DnaJ C terminal domain 122 334 6.3E-43 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal P40_18745 821e4a25cf21741e729706ac189c804f 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 350 7.0E-139 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 P40_04360 2bac30ed19205d61ecfa4a2437c7dbe1 62 Gene3D G3DSA:2.20.25.10 9 62 9.2E-24 T 13-10-2018 P40_04360 2bac30ed19205d61ecfa4a2437c7dbe1 62 Pfam PF03966 Trm112p-like protein 3 42 6.6E-10 T 13-10-2018 IPR005651 Trm112-like P40_04360 2bac30ed19205d61ecfa4a2437c7dbe1 62 SUPERFAMILY SSF158997 1 56 4.71E-21 T 13-10-2018 P40_04360 2bac30ed19205d61ecfa4a2437c7dbe1 62 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 2 55 26.071 T 13-10-2018 IPR038053 Uncharacterised protein family UPF0434 P40_11215 181f7f2c78267ca65a6351f83a5e20e3 157 Pfam PF09278 MerR, DNA binding 44 107 6.3E-17 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding P40_11215 181f7f2c78267ca65a6351f83a5e20e3 157 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.3E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_11215 181f7f2c78267ca65a6351f83a5e20e3 157 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.3E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_11215 181f7f2c78267ca65a6351f83a5e20e3 157 SUPERFAMILY SSF46955 1 115 5.49E-28 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_11215 181f7f2c78267ca65a6351f83a5e20e3 157 Gene3D G3DSA:1.10.1660.10 1 120 6.4E-30 T 13-10-2018 P40_11215 181f7f2c78267ca65a6351f83a5e20e3 157 SMART SM00422 1 70 3.9E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_11215 181f7f2c78267ca65a6351f83a5e20e3 157 Pfam PF00376 MerR family regulatory protein 4 39 7.1E-9 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_03015 bdb979712c8bf33c95ebcf2d7c2271bd 281 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 25 232 6.0E-44 T 13-10-2018 P40_03015 bdb979712c8bf33c95ebcf2d7c2271bd 281 SUPERFAMILY SSF56112 36 195 1.25E-5 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_03015 bdb979712c8bf33c95ebcf2d7c2271bd 281 PIRSF PIRSF037318 2 266 3.8E-86 T 13-10-2018 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 P40_08055 62cfad36e78336e3480f097a7cb3747c 590 SUPERFAMILY SSF116726 298 382 8.11E-13 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 P40_08055 62cfad36e78336e3480f097a7cb3747c 590 Pfam PF03600 Citrate transporter 17 535 1.3E-53 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 P40_08055 62cfad36e78336e3480f097a7cb3747c 590 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 538 554 - T 13-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 P40_08055 62cfad36e78336e3480f097a7cb3747c 590 Gene3D G3DSA:3.30.70.1450 305 378 2.0E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 P40_08055 62cfad36e78336e3480f097a7cb3747c 590 Gene3D G3DSA:3.30.70.1450 213 289 3.8E-14 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 P40_08055 62cfad36e78336e3480f097a7cb3747c 590 SUPERFAMILY SSF116726 211 291 1.96E-17 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 P40_08055 62cfad36e78336e3480f097a7cb3747c 590 Pfam PF02080 TrkA-C domain 218 286 6.6E-11 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 P40_07320 7dba21c036c42bdd0d21a19829ed0888 762 Gene3D G3DSA:3.20.20.210 393 760 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 P40_07320 7dba21c036c42bdd0d21a19829ed0888 762 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 762 37.544 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 P40_07320 7dba21c036c42bdd0d21a19829ed0888 762 SUPERFAMILY SSF51726 5 398 4.19E-107 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 P40_07320 7dba21c036c42bdd0d21a19829ed0888 762 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 761 0.0 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 P40_07320 7dba21c036c42bdd0d21a19829ed0888 762 PIRSF PIRSF000382 1 762 0.0 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 P40_07320 7dba21c036c42bdd0d21a19829ed0888 762 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 435 757 1.2E-155 T 13-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 P40_07320 7dba21c036c42bdd0d21a19829ed0888 762 SUPERFAMILY SSF51726 400 760 4.97E-124 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 P40_07320 7dba21c036c42bdd0d21a19829ed0888 762 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 319 7.0E-116 T 13-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 P40_07320 7dba21c036c42bdd0d21a19829ed0888 762 Gene3D G3DSA:3.20.20.210 6 528 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 P40_07285 f1734cd4f4080718edff311c88805aa5 333 Pfam PF11141 Protein of unknown function (DUF2914) 268 331 1.3E-22 T 13-10-2018 IPR022606 Protein of unknown function DUF2914 P40_17705 a6c7aa0bc076e5cd8da442eb9bbb2264 376 Pfam PF03739 Predicted permease YjgP/YjgQ family 14 365 4.8E-65 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 P40_17705 a6c7aa0bc076e5cd8da442eb9bbb2264 376 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 11 365 1.0E-100 T 13-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 P40_08540 655f132e1770a54cb3b37fefae31839b 650 Pfam PF00364 Biotin-requiring enzyme 579 642 8.7E-14 T 13-10-2018 IPR000089 Biotin/lipoyl attachment P40_08540 655f132e1770a54cb3b37fefae31839b 650 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_08540 655f132e1770a54cb3b37fefae31839b 650 Gene3D G3DSA:3.30.470.130 1 446 2.2E-200 T 13-10-2018 P40_08540 655f132e1770a54cb3b37fefae31839b 650 SUPERFAMILY SSF52440 2 114 8.63E-50 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_08540 655f132e1770a54cb3b37fefae31839b 650 SUPERFAMILY SSF51246 332 444 5.76E-36 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 P40_08540 655f132e1770a54cb3b37fefae31839b 650 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 5.6E-45 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_08540 655f132e1770a54cb3b37fefae31839b 650 SUPERFAMILY SSF56059 84 346 1.34E-69 T 13-10-2018 P40_08540 655f132e1770a54cb3b37fefae31839b 650 Pfam PF02785 Biotin carboxylase C-terminal domain 337 442 2.6E-34 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_08540 655f132e1770a54cb3b37fefae31839b 650 SMART SM00878 337 443 1.3E-52 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_08540 655f132e1770a54cb3b37fefae31839b 650 SUPERFAMILY SSF51230 571 644 2.36E-19 T 13-10-2018 IPR011053 Single hybrid motif P40_08540 655f132e1770a54cb3b37fefae31839b 650 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 323 1.7E-76 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_08540 655f132e1770a54cb3b37fefae31839b 650 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 600 617 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_08540 655f132e1770a54cb3b37fefae31839b 650 Gene3D G3DSA:2.40.50.100 570 644 2.3E-21 T 13-10-2018 P40_16415 d9f255dfb56020067565c0fb4ade12b6 304 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 46.04 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 P40_16415 d9f255dfb56020067565c0fb4ade12b6 304 SUPERFAMILY SSF54211 133 277 2.43E-51 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_16415 d9f255dfb56020067565c0fb4ade12b6 304 Gene3D G3DSA:3.30.1700.10 128 299 1.4E-66 T 13-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 P40_16415 d9f255dfb56020067565c0fb4ade12b6 304 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 3.2E-107 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 P40_16415 d9f255dfb56020067565c0fb4ade12b6 304 Gene3D G3DSA:3.30.230.20 1 127 3.0E-49 T 13-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 P40_16415 d9f255dfb56020067565c0fb4ade12b6 304 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 297 1.8E-117 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 P40_16415 d9f255dfb56020067565c0fb4ade12b6 304 SUPERFAMILY SSF54211 3 124 9.1E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_08425 e58623773c2880e34a07f4c98fdf6dec 624 SUPERFAMILY SSF51971 255 594 7.77E-26 T 13-10-2018 P40_08425 e58623773c2880e34a07f4c98fdf6dec 624 SUPERFAMILY SSF53335 61 241 2.84E-6 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_08425 e58623773c2880e34a07f4c98fdf6dec 624 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 121 239 6.9E-38 T 13-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 P40_08425 e58623773c2880e34a07f4c98fdf6dec 624 Pfam PF01266 FAD dependent oxidoreductase 255 590 3.2E-32 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 P40_08425 e58623773c2880e34a07f4c98fdf6dec 624 Gene3D G3DSA:3.40.50.150 16 251 2.5E-90 T 13-10-2018 P40_08425 e58623773c2880e34a07f4c98fdf6dec 624 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 255 618 4.6E-78 T 13-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 P40_08425 e58623773c2880e34a07f4c98fdf6dec 624 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 14 614 22.854 T 13-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 P40_08425 e58623773c2880e34a07f4c98fdf6dec 624 Gene3D G3DSA:3.50.50.60 255 615 1.2E-92 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_08425 e58623773c2880e34a07f4c98fdf6dec 624 SUPERFAMILY SSF54373 452 540 1.24E-6 T 13-10-2018 P40_08425 e58623773c2880e34a07f4c98fdf6dec 624 Gene3D G3DSA:3.30.9.10 338 542 1.2E-92 T 13-10-2018 P40_13760 4c45db8e7d7eecefe90d760fe2c54151 237 PIRSF PIRSF006102 4 221 9.4E-74 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 P40_13760 4c45db8e7d7eecefe90d760fe2c54151 237 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 212 27.095 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 P40_13760 4c45db8e7d7eecefe90d760fe2c54151 237 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 9 211 7.4E-81 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 P40_13760 4c45db8e7d7eecefe90d760fe2c54151 237 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 202 7.0E-62 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 P40_06795 dc88e71ed4e66daac75644607f2b269c 286 SUPERFAMILY SSF54637 116 284 1.87E-52 T 13-10-2018 IPR029069 HotDog domain superfamily P40_06795 dc88e71ed4e66daac75644607f2b269c 286 Pfam PF13622 Thioesterase-like superfamily 33 283 6.0E-60 T 13-10-2018 P40_06795 dc88e71ed4e66daac75644607f2b269c 286 SUPERFAMILY SSF54637 4 113 4.23E-34 T 13-10-2018 IPR029069 HotDog domain superfamily P40_06795 dc88e71ed4e66daac75644607f2b269c 286 Gene3D G3DSA:3.10.129.90 2 286 4.2E-97 T 13-10-2018 P40_15585 eec2ca7dea22542dc18fd32f663c58eb 188 Gene3D G3DSA:2.40.50.140 131 188 5.4E-22 T 13-10-2018 P40_15585 eec2ca7dea22542dc18fd32f663c58eb 188 SUPERFAMILY SSF50249 67 129 1.59E-8 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_15585 eec2ca7dea22542dc18fd32f663c58eb 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 110 4.2E-10 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 P40_15585 eec2ca7dea22542dc18fd32f663c58eb 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 1.7E-20 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 P40_15585 eec2ca7dea22542dc18fd32f663c58eb 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 1.7E-12 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like P40_15585 eec2ca7dea22542dc18fd32f663c58eb 188 Gene3D G3DSA:2.40.50.140 67 129 5.9E-12 T 13-10-2018 P40_15585 eec2ca7dea22542dc18fd32f663c58eb 188 Gene3D G3DSA:2.30.30.30 3 64 3.6E-11 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 P40_15585 eec2ca7dea22542dc18fd32f663c58eb 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site P40_15585 eec2ca7dea22542dc18fd32f663c58eb 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 41.552 T 13-10-2018 IPR011897 Translation elongation factor P-like, YeiP P40_15585 eec2ca7dea22542dc18fd32f663c58eb 188 SUPERFAMILY SSF50104 3 64 2.59E-7 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily P40_15585 eec2ca7dea22542dc18fd32f663c58eb 188 PIRSF PIRSF005901 1 188 3.5E-57 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP P40_15585 eec2ca7dea22542dc18fd32f663c58eb 188 SUPERFAMILY SSF50249 132 188 3.26E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_15585 eec2ca7dea22542dc18fd32f663c58eb 188 SMART SM01185 69 124 2.2E-9 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 P40_15585 eec2ca7dea22542dc18fd32f663c58eb 188 SMART SM00841 132 187 8.7E-28 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 P40_07025 eacdd68ac790c5a9bdc663ac9c14b446 715 SUPERFAMILY SSF48179 624 714 3.74E-22 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_07025 eacdd68ac790c5a9bdc663ac9c14b446 715 SUPERFAMILY SSF52096 2 305 1.57E-69 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_07025 eacdd68ac790c5a9bdc663ac9c14b446 715 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 13-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 P40_07025 eacdd68ac790c5a9bdc663ac9c14b446 715 Gene3D G3DSA:1.10.1040.50 498 709 4.5E-77 T 13-10-2018 P40_07025 eacdd68ac790c5a9bdc663ac9c14b446 715 Gene3D G3DSA:3.40.50.720 314 497 2.4E-68 T 13-10-2018 P40_07025 eacdd68ac790c5a9bdc663ac9c14b446 715 SUPERFAMILY SSF51735 312 496 3.26E-56 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_07025 eacdd68ac790c5a9bdc663ac9c14b446 715 Gene3D G3DSA:3.90.226.10 1 313 7.2E-104 T 13-10-2018 P40_07025 eacdd68ac790c5a9bdc663ac9c14b446 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 592 1.2E-23 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 P40_07025 eacdd68ac790c5a9bdc663ac9c14b446 715 SUPERFAMILY SSF48179 496 638 2.72E-30 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_07025 eacdd68ac790c5a9bdc663ac9c14b446 715 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 2.1E-61 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 P40_07025 eacdd68ac790c5a9bdc663ac9c14b446 715 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 209 1.6E-40 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_07025 eacdd68ac790c5a9bdc663ac9c14b446 715 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 13-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 P40_16370 ad2ab0f15fb1ee3df6c137fefde162c5 407 Gene3D G3DSA:1.20.81.30 260 369 9.6E-30 T 13-10-2018 P40_16370 ad2ab0f15fb1ee3df6c137fefde162c5 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 13-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 P40_16370 ad2ab0f15fb1ee3df6c137fefde162c5 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 2.6E-17 T 13-10-2018 IPR003004 GspF/PilC family P40_16370 ad2ab0f15fb1ee3df6c137fefde162c5 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 2.6E-17 T 13-10-2018 IPR003004 GspF/PilC family P40_16370 ad2ab0f15fb1ee3df6c137fefde162c5 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 2.6E-17 T 13-10-2018 IPR003004 GspF/PilC family P40_16370 ad2ab0f15fb1ee3df6c137fefde162c5 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 2.6E-17 T 13-10-2018 IPR003004 GspF/PilC family P40_16370 ad2ab0f15fb1ee3df6c137fefde162c5 407 Gene3D G3DSA:1.20.81.30 59 175 2.3E-31 T 13-10-2018 P40_16370 ad2ab0f15fb1ee3df6c137fefde162c5 407 Pfam PF00482 Type II secretion system (T2SS), protein F 73 196 7.4E-31 T 13-10-2018 IPR018076 Type II secretion system F domain P40_16370 ad2ab0f15fb1ee3df6c137fefde162c5 407 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 7.9E-29 T 13-10-2018 IPR018076 Type II secretion system F domain P40_17910 b25fc0e98b79c07a1588ee0f47a4e4b9 167 ProSitePatterns PS00855 Signal peptidases II signature. 106 118 - T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_17910 b25fc0e98b79c07a1588ee0f47a4e4b9 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 139 155 1.1E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_17910 b25fc0e98b79c07a1588ee0f47a4e4b9 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 56 64 1.1E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_17910 b25fc0e98b79c07a1588ee0f47a4e4b9 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 103 118 1.1E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_17910 b25fc0e98b79c07a1588ee0f47a4e4b9 167 TIGRFAM TIGR00077 lspA: signal peptidase II 11 159 7.2E-42 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_17910 b25fc0e98b79c07a1588ee0f47a4e4b9 167 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 164 17.1 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_17910 b25fc0e98b79c07a1588ee0f47a4e4b9 167 Pfam PF01252 Signal peptidase (SPase) II 19 158 4.1E-39 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P40_18200 84eb6c89a6ed2149121f91b51bd06b9f 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 2 101 9.9E-37 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18200 84eb6c89a6ed2149121f91b51bd06b9f 104 SMART SM00739 3 30 2.6E-5 T 13-10-2018 IPR005824 KOW P40_18200 84eb6c89a6ed2149121f91b51bd06b9f 104 Pfam PF00467 KOW motif 7 31 3.1E-5 T 13-10-2018 IPR005824 KOW P40_18200 84eb6c89a6ed2149121f91b51bd06b9f 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 13-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18200 84eb6c89a6ed2149121f91b51bd06b9f 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 101 9.9E-24 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18200 84eb6c89a6ed2149121f91b51bd06b9f 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 96 19.413 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18200 84eb6c89a6ed2149121f91b51bd06b9f 104 Gene3D G3DSA:2.30.30.30 1 103 1.5E-38 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 P40_18200 84eb6c89a6ed2149121f91b51bd06b9f 104 SUPERFAMILY SSF50104 3 100 5.52E-33 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily P40_11590 93f8f0d3ceb0b9fbbdcfece9ce2f1171 284 SUPERFAMILY SSF51621 2 224 9.42E-67 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 P40_11590 93f8f0d3ceb0b9fbbdcfece9ce2f1171 284 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 5 214 6.0E-47 T 13-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 P40_11590 93f8f0d3ceb0b9fbbdcfece9ce2f1171 284 PIRSF PIRSF015582 1 284 3.4E-76 T 13-10-2018 IPR011206 Citrate lyase beta subunit-like P40_11590 93f8f0d3ceb0b9fbbdcfece9ce2f1171 284 Gene3D G3DSA:3.20.20.60 1 280 2.8E-86 T 13-10-2018 P40_14260 65c44b8ff0aa2f7485acc03e019a20f1 229 Gene3D G3DSA:1.20.950.20 5 220 1.3E-76 T 13-10-2018 P40_14260 65c44b8ff0aa2f7485acc03e019a20f1 229 Pfam PF02665 Nitrate reductase gamma subunit 10 228 1.5E-80 T 13-10-2018 IPR023234 NarG-like domain P40_14260 65c44b8ff0aa2f7485acc03e019a20f1 229 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 8 228 4.0E-87 T 13-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 P40_14260 65c44b8ff0aa2f7485acc03e019a20f1 229 SUPERFAMILY SSF103501 7 228 2.22E-68 T 13-10-2018 IPR036197 NarG-like superfamily P40_15815 5fb2c8d05a6ed94f5c3270e8430ccb86 195 SUPERFAMILY SSF54719 84 194 3.14E-46 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_15815 5fb2c8d05a6ed94f5c3270e8430ccb86 195 SUPERFAMILY SSF46609 1 84 3.67E-35 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_15815 5fb2c8d05a6ed94f5c3270e8430ccb86 195 PIRSF PIRSF000349 1 195 4.8E-88 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_15815 5fb2c8d05a6ed94f5c3270e8430ccb86 195 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 191 1.9E-41 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_15815 5fb2c8d05a6ed94f5c3270e8430ccb86 195 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 159 166 - T 13-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_15815 5fb2c8d05a6ed94f5c3270e8430ccb86 195 Gene3D G3DSA:2.40.500.20 83 195 5.9E-46 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_15815 5fb2c8d05a6ed94f5c3270e8430ccb86 195 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 4.0E-33 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_15815 5fb2c8d05a6ed94f5c3270e8430ccb86 195 Gene3D G3DSA:1.10.287.990 20 82 2.4E-24 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_15815 5fb2c8d05a6ed94f5c3270e8430ccb86 195 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.3E-22 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_15815 5fb2c8d05a6ed94f5c3270e8430ccb86 195 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 5.3E-22 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_15815 5fb2c8d05a6ed94f5c3270e8430ccb86 195 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 5.3E-22 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_15815 5fb2c8d05a6ed94f5c3270e8430ccb86 195 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.3E-22 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_15815 5fb2c8d05a6ed94f5c3270e8430ccb86 195 PRINTS PR01703 Manganese superoxide dismutase signature 157 169 5.3E-22 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P40_11585 f98689ed124ef124c33391ff375e242e 255 Gene3D G3DSA:3.40.50.720 5 254 6.1E-72 T 13-10-2018 P40_11585 f98689ed124ef124c33391ff375e242e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11585 f98689ed124ef124c33391ff375e242e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11585 f98689ed124ef124c33391ff375e242e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11585 f98689ed124ef124c33391ff375e242e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11585 f98689ed124ef124c33391ff375e242e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11585 f98689ed124ef124c33391ff375e242e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11585 f98689ed124ef124c33391ff375e242e 255 SUPERFAMILY SSF51735 9 254 5.21E-75 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_11585 f98689ed124ef124c33391ff375e242e 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 251 5.6E-55 T 13-10-2018 P40_00180 306bfb55e437295d46bd74dc75152d96 354 Gene3D G3DSA:3.40.50.720 1 347 1.1E-36 T 13-10-2018 P40_00180 306bfb55e437295d46bd74dc75152d96 354 SUPERFAMILY SSF51735 1 286 4.51E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_00180 306bfb55e437295d46bd74dc75152d96 354 Pfam PF07993 Male sterility protein 5 232 2.3E-21 T 13-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 P40_06640 3068d7085a82e5d6a329b700c1137774 112 Gene3D G3DSA:1.10.490.10 1 111 2.1E-29 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 P40_06640 3068d7085a82e5d6a329b700c1137774 112 SUPERFAMILY SSF46458 1 108 1.34E-19 T 13-10-2018 IPR009050 Globin-like superfamily P40_16700 d83cd79e9afe821bc494dd8b842d1179 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_16700 d83cd79e9afe821bc494dd8b842d1179 381 SUPERFAMILY SSF56645 5 242 6.81E-90 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_16700 d83cd79e9afe821bc494dd8b842d1179 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 379 1.5E-46 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_16700 d83cd79e9afe821bc494dd8b842d1179 381 Gene3D G3DSA:1.20.140.10 238 380 2.1E-48 T 13-10-2018 P40_16700 d83cd79e9afe821bc494dd8b842d1179 381 SUPERFAMILY SSF47203 228 379 2.09E-52 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_16700 d83cd79e9afe821bc494dd8b842d1179 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_16700 d83cd79e9afe821bc494dd8b842d1179 381 Gene3D G3DSA:2.40.110.10 122 237 5.7E-46 T 13-10-2018 P40_16700 d83cd79e9afe821bc494dd8b842d1179 381 PIRSF PIRSF016578 4 380 3.8E-15 T 13-10-2018 P40_16700 d83cd79e9afe821bc494dd8b842d1179 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 4.6E-26 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_16700 d83cd79e9afe821bc494dd8b842d1179 381 Gene3D G3DSA:1.10.540.10 1 121 7.8E-41 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_16700 d83cd79e9afe821bc494dd8b842d1179 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 119 1.3E-37 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_19975 920942df573b9edc32ff1eb9c7ebb51b 543 Gene3D G3DSA:3.30.450.20 34 183 3.1E-39 T 13-10-2018 P40_19975 920942df573b9edc32ff1eb9c7ebb51b 543 Gene3D G3DSA:1.10.287.950 220 513 2.7E-78 T 13-10-2018 P40_19975 920942df573b9edc32ff1eb9c7ebb51b 543 SMART SM01049 33 126 1.8E-27 T 13-10-2018 IPR033480 Single Cache domain 2 P40_19975 920942df573b9edc32ff1eb9c7ebb51b 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 478 9.6E-47 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_19975 920942df573b9edc32ff1eb9c7ebb51b 543 SMART SM00283 264 511 3.2E-78 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_19975 920942df573b9edc32ff1eb9c7ebb51b 543 SUPERFAMILY SSF58104 241 512 1.1E-66 T 13-10-2018 P40_19975 920942df573b9edc32ff1eb9c7ebb51b 543 Pfam PF17200 Single Cache domain 2 38 185 3.1E-40 T 13-10-2018 IPR033480 Single Cache domain 2 P40_09185 d591c57547bd19e55da663cdf2666d96 399 SUPERFAMILY SSF51735 12 160 2.55E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_09185 d591c57547bd19e55da663cdf2666d96 399 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 14 142 4.3E-45 T 13-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 P40_09185 d591c57547bd19e55da663cdf2666d96 399 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 14 393 46.438 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 P40_09185 d591c57547bd19e55da663cdf2666d96 399 SUPERFAMILY SSF69055 303 394 5.49E-28 T 13-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 P40_09185 d591c57547bd19e55da663cdf2666d96 399 Gene3D G3DSA:1.10.1740.10 314 398 8.5E-27 T 13-10-2018 P40_09185 d591c57547bd19e55da663cdf2666d96 399 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 13 395 4.9E-150 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 P40_09185 d591c57547bd19e55da663cdf2666d96 399 SUPERFAMILY SSF55347 136 275 1.47E-61 T 13-10-2018 P40_09185 d591c57547bd19e55da663cdf2666d96 399 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 156 240 7.9E-39 T 13-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 P40_09185 d591c57547bd19e55da663cdf2666d96 399 PIRSF PIRSF006205 11 398 2.0E-150 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 P40_09185 d591c57547bd19e55da663cdf2666d96 399 Pfam PF13288 DXP reductoisomerase C-terminal domain 272 388 6.0E-39 T 13-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 P40_09185 d591c57547bd19e55da663cdf2666d96 399 Gene3D G3DSA:3.40.50.720 5 160 3.0E-55 T 13-10-2018 P40_16890 92c5bad68291b7fc0c4d75f6befa55e6 292 PIRSF PIRSF038471 1 279 1.7E-72 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 P40_16890 92c5bad68291b7fc0c4d75f6befa55e6 292 Gene3D G3DSA:2.40.10.340 116 262 1.9E-34 T 13-10-2018 P40_16890 92c5bad68291b7fc0c4d75f6befa55e6 292 Pfam PF04085 rod shape-determining protein MreC 118 264 5.0E-38 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 P40_16890 92c5bad68291b7fc0c4d75f6befa55e6 292 Gene3D G3DSA:2.40.10.350 175 252 1.9E-34 T 13-10-2018 P40_16890 92c5bad68291b7fc0c4d75f6befa55e6 292 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 9 266 3.0E-55 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 Gene3D G3DSA:2.30.130.10 266 368 9.3E-32 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 259 35.102 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 SMART SM00359 277 360 2.3E-13 T 13-10-2018 IPR002478 PUA domain GO:0003723 P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 SUPERFAMILY SSF53633 6 257 8.9E-69 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 Pfam PF01472 PUA domain 277 351 8.2E-21 T 13-10-2018 IPR002478 PUA domain GO:0003723 P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 TIGRFAM TIGR01027 proB: glutamate 5-kinase 6 367 1.1E-129 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 SUPERFAMILY SSF88697 276 367 4.66E-23 T 13-10-2018 IPR015947 PUA-like superfamily P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 Gene3D G3DSA:3.40.1160.10 1 265 4.8E-86 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 PIRSF PIRSF000729 1 368 6.9E-126 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 4.8E-48 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 4.8E-48 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 4.8E-48 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 4.8E-48 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 4.8E-48 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 P40_17935 b0340ba09bc7ca9b23f1d18195d3da26 369 Pfam PF00696 Amino acid kinase family 6 232 1.4E-42 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 P40_01290 549a91636af46ed0665d059507d8efff 354 PIRSF PIRSF001359 1 329 5.3E-84 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 P40_01290 549a91636af46ed0665d059507d8efff 354 SUPERFAMILY SSF51569 3 328 8.64E-107 T 13-10-2018 P40_01290 549a91636af46ed0665d059507d8efff 354 Gene3D G3DSA:3.20.20.70 1 354 1.4E-154 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_01290 549a91636af46ed0665d059507d8efff 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 4.2E-99 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 P40_01290 549a91636af46ed0665d059507d8efff 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 1.2E-203 T 13-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 P40_01290 549a91636af46ed0665d059507d8efff 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 P40_01290 549a91636af46ed0665d059507d8efff 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 P40_01290 549a91636af46ed0665d059507d8efff 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 6.5E-94 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 P40_06940 fe4f17a86c183509fcfa3fcbac9811c9 314 Pfam PF01189 16S rRNA methyltransferase RsmB/F 104 310 1.4E-48 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 P40_06940 fe4f17a86c183509fcfa3fcbac9811c9 314 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 35 312 1.7E-64 T 13-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 P40_06940 fe4f17a86c183509fcfa3fcbac9811c9 314 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 2 100 6.4E-10 T 13-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 P40_06940 fe4f17a86c183509fcfa3fcbac9811c9 314 SUPERFAMILY SSF53335 3 311 1.67E-50 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_06940 fe4f17a86c183509fcfa3fcbac9811c9 314 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 86 100 8.3E-20 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase P40_06940 fe4f17a86c183509fcfa3fcbac9811c9 314 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 233 249 8.3E-20 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase P40_06940 fe4f17a86c183509fcfa3fcbac9811c9 314 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 115 125 8.3E-20 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase P40_06940 fe4f17a86c183509fcfa3fcbac9811c9 314 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 182 194 8.3E-20 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase P40_06940 fe4f17a86c183509fcfa3fcbac9811c9 314 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 296 313 8.3E-20 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase P40_06940 fe4f17a86c183509fcfa3fcbac9811c9 314 Gene3D G3DSA:3.40.50.150 1 313 9.2E-77 T 13-10-2018 P40_11015 62aa304400c9b14edd2062c2009b126f 468 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 268 279 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P40_11015 62aa304400c9b14edd2062c2009b126f 468 Pfam PF12801 4Fe-4S binding domain 91 129 1.3E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain P40_11015 62aa304400c9b14edd2062c2009b126f 468 SUPERFAMILY SSF54862 102 360 1.09E-31 T 13-10-2018 P40_11015 62aa304400c9b14edd2062c2009b126f 468 Pfam PF13746 4Fe-4S dicluster domain 216 320 6.3E-44 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain P40_11015 62aa304400c9b14edd2062c2009b126f 468 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 350 468 8.9E-30 T 13-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain P40_11015 62aa304400c9b14edd2062c2009b126f 468 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 38 467 4.1E-165 T 13-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 P40_11015 62aa304400c9b14edd2062c2009b126f 468 Gene3D G3DSA:2.60.40.10 352 468 2.0E-30 T 13-10-2018 IPR013783 Immunoglobulin-like fold P40_08870 aae42dbd1d173ce906a421a07f54027f 337 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 4 331 6.8E-108 T 13-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 P40_08870 aae42dbd1d173ce906a421a07f54027f 337 SUPERFAMILY SSF55909 3 332 1.64E-109 T 13-10-2018 P40_08870 aae42dbd1d173ce906a421a07f54027f 337 Gene3D G3DSA:3.75.10.10 1 337 5.6E-115 T 13-10-2018 P40_03935 1dc004be7abf01428979ea3439e1fc52 607 Gene3D G3DSA:3.90.780.10 391 590 5.3E-51 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_03935 1dc004be7abf01428979ea3439e1fc52 607 Gene3D G3DSA:3.60.21.10 29 388 1.0E-101 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like P40_03935 1dc004be7abf01428979ea3439e1fc52 607 SUPERFAMILY SSF55816 389 561 2.49E-38 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_03935 1dc004be7abf01428979ea3439e1fc52 607 SUPERFAMILY SSF56300 35 336 2.72E-69 T 13-10-2018 P40_03935 1dc004be7abf01428979ea3439e1fc52 607 ProSitePatterns PS00785 5'-nucleotidase signature 1. 40 52 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_03935 1dc004be7abf01428979ea3439e1fc52 607 Pfam PF02872 5'-nucleotidase, C-terminal domain 391 557 3.4E-31 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_03935 1dc004be7abf01428979ea3439e1fc52 607 PRINTS PR01607 Apyrase family signature 450 473 3.3E-34 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_03935 1dc004be7abf01428979ea3439e1fc52 607 PRINTS PR01607 Apyrase family signature 531 550 3.3E-34 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_03935 1dc004be7abf01428979ea3439e1fc52 607 PRINTS PR01607 Apyrase family signature 38 56 3.3E-34 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_03935 1dc004be7abf01428979ea3439e1fc52 607 PRINTS PR01607 Apyrase family signature 244 267 3.3E-34 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_03935 1dc004be7abf01428979ea3439e1fc52 607 PRINTS PR01607 Apyrase family signature 292 312 3.3E-34 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_03935 1dc004be7abf01428979ea3439e1fc52 607 PRINTS PR01607 Apyrase family signature 225 242 3.3E-34 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_15880 aff1889a058e0a07f15eb35654cbf611 526 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 511 6.0E-46 T 13-10-2018 IPR032090 Peptide chain release factor 3, C-terminal P40_15880 aff1889a058e0a07f15eb35654cbf611 526 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site P40_15880 aff1889a058e0a07f15eb35654cbf611 526 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 524 52.173 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 P40_15880 aff1889a058e0a07f15eb35654cbf611 526 PRINTS PR00315 GTP-binding elongation factor signature 82 92 3.8E-12 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_15880 aff1889a058e0a07f15eb35654cbf611 526 PRINTS PR00315 GTP-binding elongation factor signature 62 70 3.8E-12 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_15880 aff1889a058e0a07f15eb35654cbf611 526 PRINTS PR00315 GTP-binding elongation factor signature 98 109 3.8E-12 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_15880 aff1889a058e0a07f15eb35654cbf611 526 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.8E-12 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_15880 aff1889a058e0a07f15eb35654cbf611 526 PRINTS PR00315 GTP-binding elongation factor signature 134 143 3.8E-12 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_15880 aff1889a058e0a07f15eb35654cbf611 526 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 525 9.7E-271 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 P40_15880 aff1889a058e0a07f15eb35654cbf611 526 Pfam PF03144 Elongation factor Tu domain 2 311 377 6.1E-9 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 P40_15880 aff1889a058e0a07f15eb35654cbf611 526 SUPERFAMILY SSF52540 7 274 5.83E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_15880 aff1889a058e0a07f15eb35654cbf611 526 SUPERFAMILY SSF50447 259 390 7.54E-28 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P40_15880 aff1889a058e0a07f15eb35654cbf611 526 Gene3D G3DSA:3.30.70.3280 387 526 2.3E-50 T 13-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily P40_15880 aff1889a058e0a07f15eb35654cbf611 526 Gene3D G3DSA:3.40.50.300 69 376 1.1E-114 T 13-10-2018 P40_15880 aff1889a058e0a07f15eb35654cbf611 526 SUPERFAMILY SSF54980 390 465 7.19E-17 T 13-10-2018 IPR035647 EF-G domain III/V-like P40_15880 aff1889a058e0a07f15eb35654cbf611 526 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 144 6.9E-19 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P40_15880 aff1889a058e0a07f15eb35654cbf611 526 Gene3D G3DSA:3.40.50.300 107 272 1.1E-114 T 13-10-2018 P40_15880 aff1889a058e0a07f15eb35654cbf611 526 Pfam PF00009 Elongation factor Tu GTP binding domain 9 274 1.3E-46 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 SUPERFAMILY SSF53671 17 320 1.28E-94 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 19 319 7.5E-90 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 Gene3D G3DSA:3.40.50.1370 19 317 1.1E-89 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 19 163 1.0E-38 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 Gene3D G3DSA:3.40.50.1370 151 306 1.1E-89 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 65 72 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 65 84 8.3E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 284 307 8.3E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 151 162 8.3E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 281 8.3E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 170 317 4.7E-26 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 18 321 41.619 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 276 281 2.4E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 93 102 2.4E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 235 244 2.4E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 300 314 2.4E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 55 77 2.4E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_00385 9788f0b87d49a2065ff5c09ffda41cbb 339 PRINTS PR00101 Aspartate carbamoyltransferase signature 150 167 2.4E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_14820 5800bc3dcd11c8c9beb331fab1ebdf22 454 SMART SM00387 340 446 1.4E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_14820 5800bc3dcd11c8c9beb331fab1ebdf22 454 SUPERFAMILY SSF47384 220 286 4.12E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_14820 5800bc3dcd11c8c9beb331fab1ebdf22 454 Gene3D G3DSA:3.30.565.10 308 447 5.8E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_14820 5800bc3dcd11c8c9beb331fab1ebdf22 454 SUPERFAMILY SSF55874 310 443 4.06E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_14820 5800bc3dcd11c8c9beb331fab1ebdf22 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 3.4E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_14820 5800bc3dcd11c8c9beb331fab1ebdf22 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 3.4E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_14820 5800bc3dcd11c8c9beb331fab1ebdf22 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 443 7.1E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_14820 5800bc3dcd11c8c9beb331fab1ebdf22 454 Gene3D G3DSA:1.10.287.130 184 291 6.6E-10 T 13-10-2018 P40_18135 ff215c85d972ce59f3fb13fdea280ec5 208 SUPERFAMILY SSF55174 3 208 2.62E-70 T 13-10-2018 P40_18135 ff215c85d972ce59f3fb13fdea280ec5 208 Pfam PF01479 S4 domain 99 145 2.6E-19 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18135 ff215c85d972ce59f3fb13fdea280ec5 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 5.3E-81 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 P40_18135 ff215c85d972ce59f3fb13fdea280ec5 208 SMART SM00363 98 160 4.9E-19 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18135 ff215c85d972ce59f3fb13fdea280ec5 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 36.468 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 P40_18135 ff215c85d972ce59f3fb13fdea280ec5 208 SMART SM01390 3 97 8.1E-46 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 P40_18135 ff215c85d972ce59f3fb13fdea280ec5 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 7.7E-31 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 P40_18135 ff215c85d972ce59f3fb13fdea280ec5 208 Gene3D G3DSA:1.10.1050.10 1 104 5.8E-42 T 13-10-2018 P40_18135 ff215c85d972ce59f3fb13fdea280ec5 208 Gene3D G3DSA:3.10.290.10 105 193 6.0E-37 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 P40_18135 ff215c85d972ce59f3fb13fdea280ec5 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 13-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_15745 dc7bdbf15745ec9c830a65f5be118d13 151 Gene3D G3DSA:3.30.1490.190 92 151 2.8E-12 T 13-10-2018 P40_15745 dc7bdbf15745ec9c830a65f5be118d13 151 Gene3D G3DSA:1.10.10.10 1 89 6.9E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_15745 dc7bdbf15745ec9c830a65f5be118d13 151 SUPERFAMILY SSF46785 12 147 2.33E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_15745 dc7bdbf15745ec9c830a65f5be118d13 151 Pfam PF01475 Ferric uptake regulator family 18 114 4.3E-9 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 P40_14390 967c09f76403a4c0e86aec04ac481866 159 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 158 3.5E-50 T 13-10-2018 IPR008136 CinA, C-terminal P40_14390 967c09f76403a4c0e86aec04ac481866 159 Gene3D G3DSA:3.90.950.20 1 158 1.4E-60 T 13-10-2018 IPR036653 CinA-like, C-terminal P40_14390 967c09f76403a4c0e86aec04ac481866 159 SUPERFAMILY SSF142433 6 158 7.85E-56 T 13-10-2018 IPR036653 CinA-like, C-terminal P40_14390 967c09f76403a4c0e86aec04ac481866 159 Pfam PF02464 Competence-damaged protein 9 156 1.2E-58 T 13-10-2018 IPR008136 CinA, C-terminal P40_19585 ad9ad6b43b0a70bd36b2de9628340e03 107 Gene3D G3DSA:1.20.1440.40 2 106 4.5E-33 T 13-10-2018 IPR036814 YqcC-like superfamily P40_19585 ad9ad6b43b0a70bd36b2de9628340e03 107 SUPERFAMILY SSF158452 5 106 2.09E-34 T 13-10-2018 IPR036814 YqcC-like superfamily P40_19585 ad9ad6b43b0a70bd36b2de9628340e03 107 PIRSF PIRSF006257 2 106 1.7E-33 T 13-10-2018 IPR007384 Protein of unknown function UCP006257 P40_19585 ad9ad6b43b0a70bd36b2de9628340e03 107 Pfam PF04287 tRNA pseudouridine synthase C 8 103 9.9E-34 T 13-10-2018 IPR023376 YqcC-like domain P40_05390 09241a789768f59efe2538302212e62c 199 SUPERFAMILY SSF110111 67 185 1.96E-40 T 13-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05390 09241a789768f59efe2538302212e62c 199 PIRSF PIRSF005413 7 198 4.8E-62 T 13-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05390 09241a789768f59efe2538302212e62c 199 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 39 182 2.7E-47 T 13-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05390 09241a789768f59efe2538302212e62c 199 Gene3D G3DSA:2.60.370.10 62 197 3.2E-42 T 13-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_15045 f00cb8c49e907437ae2e72451a50b3cd 473 Gene3D G3DSA:1.25.40.10 258 470 4.3E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_15045 f00cb8c49e907437ae2e72451a50b3cd 473 Pfam PF01435 Peptidase family M48 60 246 1.2E-32 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 P40_15045 f00cb8c49e907437ae2e72451a50b3cd 473 Gene3D G3DSA:3.30.2010.10 57 140 2.5E-8 T 13-10-2018 P40_15045 f00cb8c49e907437ae2e72451a50b3cd 473 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 1 473 39.857 T 13-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 P40_15045 f00cb8c49e907437ae2e72451a50b3cd 473 Pfam PF14559 Tetratricopeptide repeat 343 408 1.6E-7 T 13-10-2018 P40_15045 f00cb8c49e907437ae2e72451a50b3cd 473 SUPERFAMILY SSF48452 277 447 1.9E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_01265 f18fa78c461474995eec27103bd9c6f2 337 Gene3D G3DSA:3.40.50.150 132 316 3.1E-29 T 13-10-2018 P40_01265 f18fa78c461474995eec27103bd9c6f2 337 Pfam PF12840 Helix-turn-helix domain 19 74 4.6E-10 T 13-10-2018 P40_01265 f18fa78c461474995eec27103bd9c6f2 337 SMART SM00418 17 94 8.0E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_01265 f18fa78c461474995eec27103bd9c6f2 337 SUPERFAMILY SSF53335 166 314 8.13E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_01265 f18fa78c461474995eec27103bd9c6f2 337 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 19 34 1.6E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_01265 f18fa78c461474995eec27103bd9c6f2 337 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 1.6E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_01265 f18fa78c461474995eec27103bd9c6f2 337 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 1.6E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_01265 f18fa78c461474995eec27103bd9c6f2 337 Pfam PF13489 Methyltransferase domain 147 279 6.1E-17 T 13-10-2018 P40_01265 f18fa78c461474995eec27103bd9c6f2 337 Gene3D G3DSA:1.10.10.10 2 92 6.8E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_01265 f18fa78c461474995eec27103bd9c6f2 337 SUPERFAMILY SSF46785 17 181 3.29E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_04495 0e146f3b078eaa051beadd6399d41b9c 202 Gene3D G3DSA:1.10.357.10 12 199 1.8E-27 T 13-10-2018 P40_04495 0e146f3b078eaa051beadd6399d41b9c 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.3E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_04495 0e146f3b078eaa051beadd6399d41b9c 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.3E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_04495 0e146f3b078eaa051beadd6399d41b9c 202 SUPERFAMILY SSF46689 2 78 1.05E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_04495 0e146f3b078eaa051beadd6399d41b9c 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 2.5E-16 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_04495 0e146f3b078eaa051beadd6399d41b9c 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site P40_20065 5f5f2bdd7b2624bc804d865fe0739201 456 Pfam PF05292 Malonyl-CoA decarboxylase C-terminal domain 184 329 3.6E-75 T 13-10-2018 IPR007956 Malonyl-CoA decarboxylase, C-terminal GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 P40_20065 5f5f2bdd7b2624bc804d865fe0739201 456 Pfam PF05292 Malonyl-CoA decarboxylase C-terminal domain 364 427 4.6E-23 T 13-10-2018 IPR007956 Malonyl-CoA decarboxylase, C-terminal GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 P40_20065 5f5f2bdd7b2624bc804d865fe0739201 456 Gene3D G3DSA:3.40.630.150 183 456 6.3E-107 T 13-10-2018 P40_20065 5f5f2bdd7b2624bc804d865fe0739201 456 Pfam PF17408 Malonyl-CoA decarboxylase N-terminal domain 95 181 3.3E-25 T 13-10-2018 IPR035372 Malonyl-CoA decarboxylase, N-terminal KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 P40_20065 5f5f2bdd7b2624bc804d865fe0739201 456 Gene3D G3DSA:1.20.140.90 48 182 3.4E-36 T 13-10-2018 IPR038351 Malonyl-CoA decarboxylase, N-terminal domain superfamily KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 P40_13815 dbf676728c69344bf78df8af71b2c9c1 747 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 324 743 33.276 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 P40_13815 dbf676728c69344bf78df8af71b2c9c1 747 SUPERFAMILY SSF51735 10 177 1.4E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_13815 dbf676728c69344bf78df8af71b2c9c1 747 Gene3D G3DSA:3.40.50.720 8 184 2.3E-56 T 13-10-2018 P40_13815 dbf676728c69344bf78df8af71b2c9c1 747 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 328 741 1.7E-124 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 P40_13815 dbf676728c69344bf78df8af71b2c9c1 747 Gene3D G3DSA:3.65.10.10 336 545 1.5E-156 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 P40_13815 dbf676728c69344bf78df8af71b2c9c1 747 Pfam PF02153 Prephenate dehydrogenase 23 279 1.3E-73 T 13-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 P40_13815 dbf676728c69344bf78df8af71b2c9c1 747 Gene3D G3DSA:3.65.10.10 328 734 1.5E-156 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 P40_13815 dbf676728c69344bf78df8af71b2c9c1 747 ProSitePatterns PS00885 EPSP synthase signature 2. 655 673 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 P40_13815 dbf676728c69344bf78df8af71b2c9c1 747 ProSitePatterns PS00104 EPSP synthase signature 1. 403 417 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 P40_13815 dbf676728c69344bf78df8af71b2c9c1 747 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 321 735 3.7E-118 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 P40_13815 dbf676728c69344bf78df8af71b2c9c1 747 SUPERFAMILY SSF55205 318 742 5.72E-131 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 P40_13815 dbf676728c69344bf78df8af71b2c9c1 747 Gene3D G3DSA:1.10.3660.10 185 289 2.5E-34 T 13-10-2018 P40_13815 dbf676728c69344bf78df8af71b2c9c1 747 SUPERFAMILY SSF48179 181 289 7.71E-35 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_03570 dcb79ce5bdd99f057b72cfa9e8f6aa22 636 Pfam PF07696 7TMR-DISM extracellular 2 39 172 1.9E-30 T 13-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 P40_03570 dcb79ce5bdd99f057b72cfa9e8f6aa22 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 590 5.0E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_03570 dcb79ce5bdd99f057b72cfa9e8f6aa22 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 633 5.0E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_03570 dcb79ce5bdd99f057b72cfa9e8f6aa22 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 576 5.0E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_03570 dcb79ce5bdd99f057b72cfa9e8f6aa22 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 613 5.0E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_03570 dcb79ce5bdd99f057b72cfa9e8f6aa22 636 SUPERFAMILY SSF55874 486 634 1.31E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_03570 dcb79ce5bdd99f057b72cfa9e8f6aa22 636 Pfam PF07695 7TM diverse intracellular signalling 185 387 1.1E-35 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 P40_03570 dcb79ce5bdd99f057b72cfa9e8f6aa22 636 Gene3D G3DSA:1.10.287.130 388 478 1.0E-8 T 13-10-2018 P40_03570 dcb79ce5bdd99f057b72cfa9e8f6aa22 636 SUPERFAMILY SSF47384 405 476 1.24E-8 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_03570 dcb79ce5bdd99f057b72cfa9e8f6aa22 636 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 526 635 6.5E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_03570 dcb79ce5bdd99f057b72cfa9e8f6aa22 636 Gene3D G3DSA:2.60.40.2380 34 181 2.0E-29 T 13-10-2018 P40_03570 dcb79ce5bdd99f057b72cfa9e8f6aa22 636 Gene3D G3DSA:3.30.565.10 491 636 4.8E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_03570 dcb79ce5bdd99f057b72cfa9e8f6aa22 636 SMART SM00387 525 636 1.0E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 SUPERFAMILY SSF81271 375 447 3.49E-20 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 Pfam PF13291 ACT domain 624 701 4.4E-14 T 13-10-2018 IPR002912 ACT domain P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 Gene3D G3DSA:1.10.3210.10 2 190 1.2E-76 T 13-10-2018 P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 SMART SM00954 235 345 2.8E-61 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 Pfam PF02824 TGS domain 389 447 6.2E-21 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 Gene3D G3DSA:3.10.20.30 381 455 5.6E-30 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 Pfam PF13328 HD domain 26 175 5.2E-52 T 13-10-2018 IPR003607 HD/PDEase domain P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 Gene3D G3DSA:3.30.460.10 194 325 6.9E-47 T 13-10-2018 P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 7.9E-36 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 SUPERFAMILY SSF109604 4 190 1.78E-71 T 13-10-2018 P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 SUPERFAMILY SSF81301 181 392 2.45E-60 T 13-10-2018 P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 Gene3D G3DSA:3.30.70.260 625 702 6.2E-11 T 13-10-2018 P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 700 1.3E-243 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 SMART SM00471 41 153 6.9E-8 T 13-10-2018 IPR003607 HD/PDEase domain P40_00810 414fb5ecb6771bf87bdae08420acbeb0 702 SUPERFAMILY SSF55021 628 701 1.92E-6 T 13-10-2018 P40_15550 20af8b98361b116a1634220aea87b49b 249 Gene3D G3DSA:1.10.10.1880 178 247 2.1E-19 T 13-10-2018 P40_15550 20af8b98361b116a1634220aea87b49b 249 Pfam PF01936 NYN domain 16 148 4.8E-33 T 13-10-2018 IPR021139 NYN domain, limkain-b1-type P40_15550 20af8b98361b116a1634220aea87b49b 249 Gene3D G3DSA:3.40.50.1010 6 152 1.7E-13 T 13-10-2018 P40_15550 20af8b98361b116a1634220aea87b49b 249 Pfam PF12872 OST-HTH/LOTUS domain 183 244 1.6E-12 T 13-10-2018 IPR025605 OST-HTH/LOTUS domain P40_03320 261b654aaf93db3c6713ed440040e733 329 SUPERFAMILY SSF51430 1 312 2.75E-102 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_03320 261b654aaf93db3c6713ed440040e733 329 Pfam PF00248 Aldo/keto reductase family 16 308 6.3E-78 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain P40_03320 261b654aaf93db3c6713ed440040e733 329 Gene3D G3DSA:3.20.20.100 1 327 6.0E-122 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_16540 8709d6c1494cfd99ceed788c8ed05656 664 SUPERFAMILY SSF53649 276 651 2.04E-57 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 P40_16540 8709d6c1494cfd99ceed788c8ed05656 664 Pfam PF00884 Sulfatase 278 567 3.5E-38 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 P40_16540 8709d6c1494cfd99ceed788c8ed05656 664 PIRSF PIRSF005091 9 663 5.3E-68 T 13-10-2018 IPR012160 Lipoteichoic acid synthase-like P40_16540 8709d6c1494cfd99ceed788c8ed05656 664 Gene3D G3DSA:3.40.720.10 273 576 4.9E-57 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 P40_18655 1375fa576b0b8ef5b28ca12b4d0808d4 305 SUPERFAMILY SSF55120 10 222 3.45E-77 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_18655 1375fa576b0b8ef5b28ca12b4d0808d4 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 303 18.437 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_18655 1375fa576b0b8ef5b28ca12b4d0808d4 305 SUPERFAMILY SSF88697 245 304 3.78E-13 T 13-10-2018 IPR015947 PUA-like superfamily P40_18655 1375fa576b0b8ef5b28ca12b4d0808d4 305 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 246 303 3.6E-19 T 13-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_18655 1375fa576b0b8ef5b28ca12b4d0808d4 305 Gene3D G3DSA:2.30.130.10 244 305 1.8E-25 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 P40_18655 1375fa576b0b8ef5b28ca12b4d0808d4 305 Gene3D G3DSA:3.30.2350.10 1 242 4.4E-89 T 13-10-2018 P40_18655 1375fa576b0b8ef5b28ca12b4d0808d4 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 242 1.1E-17 T 13-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 P40_18655 1375fa576b0b8ef5b28ca12b4d0808d4 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 3.0E-57 T 13-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 P40_18655 1375fa576b0b8ef5b28ca12b4d0808d4 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 1.7E-78 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_11130 bc1538eb2fd0511154183829836c137e 304 Hamap MF_01805 Segregation and condensation protein A [scpA]. 46 277 22.508 T 13-10-2018 IPR003768 Segregation and condensation protein A P40_11130 bc1538eb2fd0511154183829836c137e 304 Pfam PF02616 Segregation and condensation protein ScpA 63 274 1.5E-31 T 13-10-2018 IPR003768 Segregation and condensation protein A P40_02240 5ffe00c00e3c5203e96e38993b04ec95 374 Gene3D G3DSA:3.40.190.170 20 341 3.2E-61 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_02240 5ffe00c00e3c5203e96e38993b04ec95 374 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 315 3.4E-19 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_06655 bbb8fef23a85a84362697892d1dd3b41 225 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 84 137 8.6E-13 T 13-10-2018 P40_06655 bbb8fef23a85a84362697892d1dd3b41 225 Gene3D G3DSA:3.40.50.150 43 182 6.0E-19 T 13-10-2018 P40_06655 bbb8fef23a85a84362697892d1dd3b41 225 SUPERFAMILY SSF53335 57 175 1.86E-19 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_01945 f6ca7f353ba42b6cab2f817321f28990 200 SUPERFAMILY SSF56925 44 200 3.92E-15 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P40_01945 f6ca7f353ba42b6cab2f817321f28990 200 Pfam PF13505 Outer membrane protein beta-barrel domain 13 200 8.1E-9 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel P40_01945 f6ca7f353ba42b6cab2f817321f28990 200 Gene3D G3DSA:2.40.160.20 23 200 1.5E-43 T 13-10-2018 P40_01945 f6ca7f353ba42b6cab2f817321f28990 200 TIGRFAM TIGR03304 OMP85_target: outer membrane insertion C-terminal signal 191 200 0.075 T 13-10-2018 IPR017690 Outer membrane insertion C-terminal signal, omp85 target P40_09750 c78cdd50f90969094f0d06cdb8b68bc9 315 SUPERFAMILY SSF56349 6 294 7.57E-40 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 P40_09750 c78cdd50f90969094f0d06cdb8b68bc9 315 Gene3D G3DSA:1.10.443.10 109 306 4.6E-28 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 P40_09750 c78cdd50f90969094f0d06cdb8b68bc9 315 Pfam PF00589 Phage integrase family 144 294 3.1E-21 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 P40_09750 c78cdd50f90969094f0d06cdb8b68bc9 315 Gene3D G3DSA:1.10.150.130 2 106 7.0E-9 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal P40_02575 c33bf5178d239c38cb0d994f66b8c658 644 SUPERFAMILY SSF56300 69 323 1.12E-24 T 13-10-2018 P40_02575 c33bf5178d239c38cb0d994f66b8c658 644 Pfam PF00149 Calcineurin-like phosphoesterase 69 279 9.1E-6 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 P40_02575 c33bf5178d239c38cb0d994f66b8c658 644 Gene3D G3DSA:2.60.120.200 473 643 1.9E-15 T 13-10-2018 P40_02575 c33bf5178d239c38cb0d994f66b8c658 644 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 525 638 2.5E-13 T 13-10-2018 P40_02575 c33bf5178d239c38cb0d994f66b8c658 644 Gene3D G3DSA:3.60.21.10 73 318 3.6E-11 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like P40_02575 c33bf5178d239c38cb0d994f66b8c658 644 SUPERFAMILY SSF49899 403 639 9.51E-18 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily P40_01165 3ea5772d0c03e49d9bef653e16c99535 444 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 54 77 - T 13-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 P40_01165 3ea5772d0c03e49d9bef653e16c99535 444 Gene3D G3DSA:3.30.830.10 19 240 6.7E-80 T 13-10-2018 P40_01165 3ea5772d0c03e49d9bef653e16c99535 444 Gene3D G3DSA:3.30.830.10 245 436 6.0E-51 T 13-10-2018 P40_01165 3ea5772d0c03e49d9bef653e16c99535 444 SUPERFAMILY SSF63411 245 440 4.0E-36 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 P40_01165 3ea5772d0c03e49d9bef653e16c99535 444 Pfam PF05193 Peptidase M16 inactive domain 188 368 1.2E-26 T 13-10-2018 IPR007863 Peptidase M16, C-terminal P40_01165 3ea5772d0c03e49d9bef653e16c99535 444 Pfam PF00675 Insulinase (Peptidase family M16) 33 178 9.3E-29 T 13-10-2018 IPR011765 Peptidase M16, N-terminal P40_01165 3ea5772d0c03e49d9bef653e16c99535 444 SUPERFAMILY SSF63411 21 227 3.85E-62 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 P40_08830 2033a2887b8142f027d0f2aea0c5317c 391 Gene3D G3DSA:3.40.50.2000 192 344 1.5E-23 T 13-10-2018 P40_08830 2033a2887b8142f027d0f2aea0c5317c 391 Pfam PF13579 Glycosyl transferase 4-like domain 20 175 1.5E-14 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 P40_08830 2033a2887b8142f027d0f2aea0c5317c 391 Pfam PF00534 Glycosyl transferases group 1 193 331 7.4E-19 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 P40_08830 2033a2887b8142f027d0f2aea0c5317c 391 Gene3D G3DSA:3.40.50.2000 5 191 9.6E-13 T 13-10-2018 P40_08830 2033a2887b8142f027d0f2aea0c5317c 391 SUPERFAMILY SSF53756 8 343 7.59E-45 T 13-10-2018 P40_13665 24c61742286dbc8c33381e0605d12d24 322 Pfam PF05175 Methyltransferase small domain 154 319 6.7E-51 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 P40_13665 24c61742286dbc8c33381e0605d12d24 322 Pfam PF08468 Methyltransferase small domain N-terminal 59 141 2.8E-14 T 13-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 P40_13665 24c61742286dbc8c33381e0605d12d24 322 Gene3D G3DSA:3.40.50.150 1 142 1.1E-15 T 13-10-2018 P40_13665 24c61742286dbc8c33381e0605d12d24 322 Gene3D G3DSA:3.40.50.150 143 322 2.2E-49 T 13-10-2018 P40_13665 24c61742286dbc8c33381e0605d12d24 322 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 1 322 34.492 T 13-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 P40_13665 24c61742286dbc8c33381e0605d12d24 322 SUPERFAMILY SSF53335 150 319 9.86E-31 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_13665 24c61742286dbc8c33381e0605d12d24 322 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 251 257 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 P40_20220 89ea54b6b786d16a8d787795bae95a7a 395 SUPERFAMILY SSF89796 13 389 9.68E-116 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_20220 89ea54b6b786d16a8d787795bae95a7a 395 Gene3D G3DSA:3.40.50.10540 14 390 4.9E-120 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_20220 89ea54b6b786d16a8d787795bae95a7a 395 Gene3D G3DSA:3.30.1540.10 240 331 4.9E-120 T 13-10-2018 P40_20220 89ea54b6b786d16a8d787795bae95a7a 395 Pfam PF02515 CoA-transferase family III 15 381 2.1E-114 T 13-10-2018 IPR003673 CoA-transferase family III GO:0003824 P40_12010 d4091f35186871d63d594d5cf3c8c6f0 599 SUPERFAMILY SSF56801 33 574 3.79E-137 T 13-10-2018 P40_12010 d4091f35186871d63d594d5cf3c8c6f0 599 Gene3D G3DSA:3.40.50.12780 42 469 9.9E-107 T 13-10-2018 P40_12010 d4091f35186871d63d594d5cf3c8c6f0 599 ProSitePatterns PS00455 Putative AMP-binding domain signature. 217 228 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_12010 d4091f35186871d63d594d5cf3c8c6f0 599 Pfam PF13193 AMP-binding enzyme C-terminal domain 485 547 6.2E-15 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_12010 d4091f35186871d63d594d5cf3c8c6f0 599 Gene3D G3DSA:3.30.300.30 470 572 3.2E-26 T 13-10-2018 P40_12010 d4091f35186871d63d594d5cf3c8c6f0 599 Pfam PF00501 AMP-binding enzyme 70 476 1.4E-90 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_12240 7d051c8ddc555a02510b9154c6ee9231 438 Gene3D G3DSA:2.40.160.60 242 438 1.3E-13 T 13-10-2018 P40_12240 7d051c8ddc555a02510b9154c6ee9231 438 SUPERFAMILY SSF56935 50 437 1.1E-9 T 13-10-2018 P40_12240 7d051c8ddc555a02510b9154c6ee9231 438 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 290 438 2.0E-8 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) P40_11795 e8fd59e0025d5a599d6a427d33f3f8bf 242 SUPERFAMILY SSF53850 23 238 1.36E-46 T 13-10-2018 P40_11795 e8fd59e0025d5a599d6a427d33f3f8bf 242 PIRSF PIRSF004846 2 240 1.1E-35 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 P40_11795 e8fd59e0025d5a599d6a427d33f3f8bf 242 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 28 230 2.2E-48 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 P40_11795 e8fd59e0025d5a599d6a427d33f3f8bf 242 Gene3D G3DSA:3.40.190.10 103 202 2.6E-66 T 13-10-2018 P40_11795 e8fd59e0025d5a599d6a427d33f3f8bf 242 Pfam PF13531 Bacterial extracellular solute-binding protein 23 238 3.5E-39 T 13-10-2018 P40_11795 e8fd59e0025d5a599d6a427d33f3f8bf 242 Gene3D G3DSA:3.40.190.10 27 237 2.6E-66 T 13-10-2018 P40_09790 db1f27601f5abe777f93359bc814de9b 516 Pfam PF13193 AMP-binding enzyme C-terminal domain 421 497 2.0E-19 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_09790 db1f27601f5abe777f93359bc814de9b 516 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_09790 db1f27601f5abe777f93359bc814de9b 516 Pfam PF00501 AMP-binding enzyme 8 412 1.2E-99 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_09790 db1f27601f5abe777f93359bc814de9b 516 Gene3D G3DSA:3.40.50.12780 2 405 1.0E-114 T 13-10-2018 P40_09790 db1f27601f5abe777f93359bc814de9b 516 Gene3D G3DSA:3.30.300.310 408 511 9.2E-32 T 13-10-2018 P40_09790 db1f27601f5abe777f93359bc814de9b 516 SUPERFAMILY SSF56801 3 510 4.45E-149 T 13-10-2018 P40_10930 cbacafcbc55dbaa1748d062047df1bb2 404 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 145 1.2E-41 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal P40_10930 cbacafcbc55dbaa1748d062047df1bb2 404 SUPERFAMILY SSF52283 2 176 2.81E-45 T 13-10-2018 P40_10930 cbacafcbc55dbaa1748d062047df1bb2 404 SUPERFAMILY SSF51735 145 325 4.33E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_10930 cbacafcbc55dbaa1748d062047df1bb2 404 Gene3D G3DSA:3.40.50.720 3 371 4.3E-139 T 13-10-2018 P40_10930 cbacafcbc55dbaa1748d062047df1bb2 404 SMART SM01003 4 145 5.4E-62 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal P40_10930 cbacafcbc55dbaa1748d062047df1bb2 404 SMART SM01002 154 319 1.0E-77 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain P40_10930 cbacafcbc55dbaa1748d062047df1bb2 404 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 150 374 1.0E-68 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain P40_10930 cbacafcbc55dbaa1748d062047df1bb2 404 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 178 203 - T 13-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 P40_10930 cbacafcbc55dbaa1748d062047df1bb2 404 Gene3D G3DSA:3.40.50.720 145 326 4.3E-139 T 13-10-2018 P40_18215 1adc721cbf46b28b594a1a66e47920cd 63 SUPERFAMILY SSF46561 1 61 1.7E-21 T 13-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18215 1adc721cbf46b28b594a1a66e47920cd 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.348 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18215 1adc721cbf46b28b594a1a66e47920cd 63 Pfam PF00831 Ribosomal L29 protein 4 60 2.7E-22 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18215 1adc721cbf46b28b594a1a66e47920cd 63 Gene3D G3DSA:1.10.287.310 1 63 3.6E-27 T 13-10-2018 P40_18215 1adc721cbf46b28b594a1a66e47920cd 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.5E-19 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18215 1adc721cbf46b28b594a1a66e47920cd 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 13-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_01810 98f154af5ce2833792098dd695e18579 516 SUPERFAMILY SSF56024 55 242 7.18E-43 T 13-10-2018 P40_01810 98f154af5ce2833792098dd695e18579 516 SMART SM00155 407 434 6.2E-6 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 P40_01810 98f154af5ce2833792098dd695e18579 516 SMART SM00155 167 194 0.03 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 P40_01810 98f154af5ce2833792098dd695e18579 516 SUPERFAMILY SSF56024 283 462 5.3E-31 T 13-10-2018 P40_01810 98f154af5ce2833792098dd695e18579 516 Pfam PF13091 PLD-like domain 320 459 5.7E-21 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 P40_01810 98f154af5ce2833792098dd695e18579 516 Pfam PF13091 PLD-like domain 81 199 6.5E-14 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 P40_01810 98f154af5ce2833792098dd695e18579 516 Gene3D G3DSA:3.30.870.10 55 253 1.9E-38 T 13-10-2018 P40_01810 98f154af5ce2833792098dd695e18579 516 Gene3D G3DSA:3.30.870.10 287 472 1.5E-37 T 13-10-2018 P40_08695 84d038e1d9be31547696da4cbce065b9 340 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 10 337 48.221 T 13-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 P40_08695 84d038e1d9be31547696da4cbce065b9 340 Gene3D G3DSA:3.20.20.300 7 335 3.6E-114 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 P40_08695 84d038e1d9be31547696da4cbce065b9 340 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 240 257 - T 13-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 P40_08695 84d038e1d9be31547696da4cbce065b9 340 SUPERFAMILY SSF51445 10 322 2.53E-82 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily P40_08695 84d038e1d9be31547696da4cbce065b9 340 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 10 299 5.3E-77 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 P40_06865 a544062b1f5abfc592cfd5bfe65869f8 330 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 319 6.2E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_06865 a544062b1f5abfc592cfd5bfe65869f8 330 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 288 303 6.2E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_06865 a544062b1f5abfc592cfd5bfe65869f8 330 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 273 315 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 P40_06865 a544062b1f5abfc592cfd5bfe65869f8 330 Pfam PF12833 Helix-turn-helix domain 242 321 1.8E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_06865 a544062b1f5abfc592cfd5bfe65869f8 330 SUPERFAMILY SSF46689 219 270 5.97E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06865 a544062b1f5abfc592cfd5bfe65869f8 330 Gene3D G3DSA:1.10.10.60 219 325 4.2E-32 T 13-10-2018 P40_06865 a544062b1f5abfc592cfd5bfe65869f8 330 Gene3D G3DSA:3.40.50.880 1 209 2.6E-56 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_06865 a544062b1f5abfc592cfd5bfe65869f8 330 SUPERFAMILY SSF52317 1 200 2.08E-42 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_06865 a544062b1f5abfc592cfd5bfe65869f8 330 Pfam PF01965 DJ-1/PfpI family 42 180 1.3E-15 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 P40_06865 a544062b1f5abfc592cfd5bfe65869f8 330 SMART SM00342 236 319 8.6E-32 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_06865 a544062b1f5abfc592cfd5bfe65869f8 330 SUPERFAMILY SSF46689 272 323 3.29E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_07600 25d3377ab1ffb0c8e4f393d36c02cd27 400 SUPERFAMILY SSF53901 279 399 1.05E-41 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_07600 25d3377ab1ffb0c8e4f393d36c02cd27 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 5.1E-133 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_07600 25d3377ab1ffb0c8e4f393d36c02cd27 400 PIRSF PIRSF000429 1 400 8.0E-122 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_07600 25d3377ab1ffb0c8e4f393d36c02cd27 400 Pfam PF02803 Thiolase, C-terminal domain 278 398 7.4E-44 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_07600 25d3377ab1ffb0c8e4f393d36c02cd27 400 Pfam PF00108 Thiolase, N-terminal domain 5 269 2.2E-69 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 P40_07600 25d3377ab1ffb0c8e4f393d36c02cd27 400 Gene3D G3DSA:3.40.47.10 141 394 6.3E-145 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_07600 25d3377ab1ffb0c8e4f393d36c02cd27 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 P40_07600 25d3377ab1ffb0c8e4f393d36c02cd27 400 SUPERFAMILY SSF53901 1 274 5.77E-72 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_07600 25d3377ab1ffb0c8e4f393d36c02cd27 400 Gene3D G3DSA:3.40.47.10 4 287 6.3E-145 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 818 1041 2.8E-48 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 SUPERFAMILY SSF52440 13 123 5.47E-46 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 SUPERFAMILY SSF51246 341 452 1.73E-36 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 SUPERFAMILY SSF56059 94 362 1.54E-67 T 13-10-2018 P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 SMART SM00878 346 450 3.4E-54 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 Gene3D G3DSA:3.30.1360.40 802 896 1.5E-30 T 13-10-2018 P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 Pfam PF02785 Biotin carboxylase C-terminal domain 346 450 6.4E-35 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 Gene3D G3DSA:2.40.50.100 1142 1212 8.6E-22 T 13-10-2018 P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 163 177 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 460 783 2.9E-96 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 Gene3D G3DSA:2.40.100.10 641 789 1.7E-59 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 127 331 2.7E-60 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 SMART SM00797 481 778 5.1E-165 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 14 1212 0.0 T 13-10-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 Gene3D G3DSA:2.40.100.10 900 1123 4.1E-97 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 SUPERFAMILY SSF50891 642 768 4.17E-32 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 Pfam PF00364 Biotin-requiring enzyme 1153 1212 9.2E-16 T 13-10-2018 IPR000089 Biotin/lipoyl attachment P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1169 1186 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 Pfam PF00289 Biotin carboxylase, N-terminal domain 13 120 1.6E-43 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 SMART SM00796 817 1050 3.5E-110 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 SUPERFAMILY SSF160467 818 910 9.02E-20 T 13-10-2018 P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 Gene3D G3DSA:3.30.470.130 3 455 1.1E-181 T 13-10-2018 P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 SUPERFAMILY SSF50891 934 1066 9.86E-26 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 SUPERFAMILY SSF51230 1143 1213 4.58E-19 T 13-10-2018 IPR011053 Single hybrid motif P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 482 761 2.8E-89 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B P40_03480 146a259667bcd7e62e5e10a3a567e832 1218 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_00475 b98a36106c74649814459ca372ed7368 283 Pfam PF01674 Lipase (class 2) 86 188 1.2E-10 T 13-10-2018 IPR002918 Lipase EstA/Esterase EstB GO:0016787 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 P40_00475 b98a36106c74649814459ca372ed7368 283 Gene3D G3DSA:3.40.50.1820 73 282 8.2E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_00475 b98a36106c74649814459ca372ed7368 283 SUPERFAMILY SSF53474 84 266 1.84E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_04390 7a3d50dc61bea7287568094a740ddfeb 522 Gene3D G3DSA:2.40.160.50 141 522 1.7E-63 T 13-10-2018 P40_04390 7a3d50dc61bea7287568094a740ddfeb 522 Pfam PF08479 POTRA domain, ShlB-type 31 104 3.2E-16 T 13-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type P40_04390 7a3d50dc61bea7287568094a740ddfeb 522 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 167 455 6.4E-19 T 13-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal P40_04390 7a3d50dc61bea7287568094a740ddfeb 522 Gene3D G3DSA:3.10.20.310 15 104 1.1E-14 T 13-10-2018 P40_13785 6d3870b5263b49b134d6a59835103572 231 Gene3D G3DSA:3.20.20.70 2 231 1.1E-82 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_13785 6d3870b5263b49b134d6a59835103572 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 8 226 9.9E-56 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_13785 6d3870b5263b49b134d6a59835103572 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 58 71 - T 13-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_13785 6d3870b5263b49b134d6a59835103572 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 1.3E-48 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_13785 6d3870b5263b49b134d6a59835103572 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 4 231 40.266 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_13785 6d3870b5263b49b134d6a59835103572 231 SUPERFAMILY SSF51366 5 229 1.57E-75 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 P40_13785 6d3870b5263b49b134d6a59835103572 231 SMART SM00934 6 226 5.3E-94 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P40_01845 617dc002c39eec6ce57ff64df8b93d8a 384 PIRSF PIRSF016578 102 373 2.3E-8 T 13-10-2018 P40_01845 617dc002c39eec6ce57ff64df8b93d8a 384 PIRSF PIRSF016578 4 86 2.1E-7 T 13-10-2018 P40_01845 617dc002c39eec6ce57ff64df8b93d8a 384 SUPERFAMILY SSF56645 6 241 8.9E-79 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_01845 617dc002c39eec6ce57ff64df8b93d8a 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 5.5E-30 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_01845 617dc002c39eec6ce57ff64df8b93d8a 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 377 1.7E-45 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_01845 617dc002c39eec6ce57ff64df8b93d8a 384 SUPERFAMILY SSF47203 229 381 1.01E-51 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_01845 617dc002c39eec6ce57ff64df8b93d8a 384 Gene3D G3DSA:1.20.140.10 230 376 5.2E-124 T 13-10-2018 P40_01845 617dc002c39eec6ce57ff64df8b93d8a 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_01845 617dc002c39eec6ce57ff64df8b93d8a 384 Gene3D G3DSA:2.40.110.10 120 229 5.2E-124 T 13-10-2018 P40_01845 617dc002c39eec6ce57ff64df8b93d8a 384 Gene3D G3DSA:1.10.540.10 8 119 5.2E-124 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_01845 617dc002c39eec6ce57ff64df8b93d8a 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 117 3.6E-25 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_00640 e248a532667961ccce06e5b3041e5a20 425 Pfam PF01189 16S rRNA methyltransferase RsmB/F 231 421 4.0E-56 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 P40_00640 e248a532667961ccce06e5b3041e5a20 425 Gene3D G3DSA:3.30.70.1170 166 220 1.9E-13 T 13-10-2018 P40_00640 e248a532667961ccce06e5b3041e5a20 425 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 21 422 6.7E-101 T 13-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 P40_00640 e248a532667961ccce06e5b3041e5a20 425 Pfam PF01029 NusB family 20 120 3.7E-17 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 P40_00640 e248a532667961ccce06e5b3041e5a20 425 SUPERFAMILY SSF48013 2 142 4.58E-22 T 13-10-2018 IPR035926 NusB-like superfamily P40_00640 e248a532667961ccce06e5b3041e5a20 425 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 212 226 4.1E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase P40_00640 e248a532667961ccce06e5b3041e5a20 425 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 307 319 4.1E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase P40_00640 e248a532667961ccce06e5b3041e5a20 425 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 357 373 4.1E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase P40_00640 e248a532667961ccce06e5b3041e5a20 425 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 405 422 4.1E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase P40_00640 e248a532667961ccce06e5b3041e5a20 425 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 241 251 4.1E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase P40_00640 e248a532667961ccce06e5b3041e5a20 425 SUPERFAMILY SSF53335 131 422 1.82E-73 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_00640 e248a532667961ccce06e5b3041e5a20 425 Gene3D G3DSA:3.40.50.150 221 423 9.5E-64 T 13-10-2018 P40_00640 e248a532667961ccce06e5b3041e5a20 425 Gene3D G3DSA:1.10.940.10 1 132 1.9E-23 T 13-10-2018 IPR035926 NusB-like superfamily P40_04610 20083f605fdc26e13d4a03a7cd0b55f1 118 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 2.3E-24 T 13-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 P40_04610 20083f605fdc26e13d4a03a7cd0b55f1 118 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 8.9E-35 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 P40_04610 20083f605fdc26e13d4a03a7cd0b55f1 118 Pfam PF02152 Dihydroneopterin aldolase 4 113 2.2E-32 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 P40_04610 20083f605fdc26e13d4a03a7cd0b55f1 118 SUPERFAMILY SSF55620 1 114 1.45E-35 T 13-10-2018 P40_04610 20083f605fdc26e13d4a03a7cd0b55f1 118 Gene3D G3DSA:3.30.1130.10 1 118 3.2E-40 T 13-10-2018 P40_04610 20083f605fdc26e13d4a03a7cd0b55f1 118 SMART SM00905 4 114 4.9E-48 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 P40_08180 f4cd4a3d7bb98d5d19bf992604918541 418 Pfam PF04932 O-Antigen ligase 184 338 1.6E-17 T 13-10-2018 IPR007016 O-antigen ligase-related P40_15030 2c3133364349aeb69628998bbcf51831 154 SUPERFAMILY SSF52833 4 154 1.96E-49 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_15030 2c3133364349aeb69628998bbcf51831 154 Gene3D G3DSA:3.40.30.10 2 153 4.6E-48 T 13-10-2018 P40_15030 2c3133364349aeb69628998bbcf51831 154 Pfam PF00578 AhpC/TSA family 7 133 1.5E-35 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P40_15030 2c3133364349aeb69628998bbcf51831 154 PIRSF PIRSF000239 1 154 7.5E-28 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P40_12595 355d5e2470f03c011ac13651ee196b59 330 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 5 324 4.1E-137 T 13-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 P40_12595 355d5e2470f03c011ac13651ee196b59 330 SUPERFAMILY SSF51679 4 324 1.57E-88 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 P40_12595 355d5e2470f03c011ac13651ee196b59 330 Gene3D G3DSA:3.20.20.30 2 328 2.0E-101 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 P40_12595 355d5e2470f03c011ac13651ee196b59 330 Pfam PF00296 Luciferase-like monooxygenase 19 300 2.6E-37 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 P40_18440 b4e23589d3b8f25ebfcfdeb52066d073 141 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 2 141 2.8E-49 T 13-10-2018 IPR005265 Uncharacterised protein family UPF0093 P40_18440 b4e23589d3b8f25ebfcfdeb52066d073 141 PIRSF PIRSF004638 1 141 4.4E-60 T 13-10-2018 IPR005265 Uncharacterised protein family UPF0093 P40_18440 b4e23589d3b8f25ebfcfdeb52066d073 141 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 141 4.9E-57 T 13-10-2018 IPR005265 Uncharacterised protein family UPF0093 P40_16500 ad553a5bf379f568981dc7afe6fb8870 285 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 212 1.3E-29 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 P40_16500 ad553a5bf379f568981dc7afe6fb8870 285 Gene3D G3DSA:3.40.1010.10 1 119 5.4E-43 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 P40_16500 ad553a5bf379f568981dc7afe6fb8870 285 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 12 233 35.411 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 P40_16500 ad553a5bf379f568981dc7afe6fb8870 285 PIRSF PIRSF005917 1 285 3.5E-98 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 P40_16500 ad553a5bf379f568981dc7afe6fb8870 285 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 13 279 2.1E-74 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 P40_16500 ad553a5bf379f568981dc7afe6fb8870 285 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 90 101 - T 13-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 P40_16500 ad553a5bf379f568981dc7afe6fb8870 285 SUPERFAMILY SSF53790 11 231 1.27E-77 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 P40_16500 ad553a5bf379f568981dc7afe6fb8870 285 Gene3D G3DSA:3.30.950.10 120 239 3.1E-37 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 P40_14505 35e1d12f746914d580eeb29b03a2b6e4 112 Gene3D G3DSA:1.20.120.160 1 112 7.4E-26 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_14505 35e1d12f746914d580eeb29b03a2b6e4 112 Pfam PF01627 Hpt domain 26 103 1.1E-13 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 P40_14505 35e1d12f746914d580eeb29b03a2b6e4 112 SUPERFAMILY SSF47226 4 111 2.09E-25 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_14505 35e1d12f746914d580eeb29b03a2b6e4 112 SMART SM00073 16 109 1.2E-6 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 P40_14445 f198388915d9bf92dbf4e7931b5524c0 177 Gene3D G3DSA:1.10.10.10 85 170 9.8E-12 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14445 f198388915d9bf92dbf4e7931b5524c0 177 Gene3D G3DSA:1.10.1740.10 2 76 5.2E-10 T 13-10-2018 P40_14445 f198388915d9bf92dbf4e7931b5524c0 177 SUPERFAMILY SSF88659 105 164 1.74E-9 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_14445 f198388915d9bf92dbf4e7931b5524c0 177 SUPERFAMILY SSF88946 7 97 7.85E-16 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_14445 f198388915d9bf92dbf4e7931b5524c0 177 Pfam PF04542 Sigma-70 region 2 14 78 6.2E-14 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_14445 f198388915d9bf92dbf4e7931b5524c0 177 Pfam PF08281 Sigma-70, region 4 111 162 3.0E-10 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_14445 f198388915d9bf92dbf4e7931b5524c0 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 160 9.1E-19 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_06600 4688eebf64850120766da1f8a329a6a6 245 Pfam PF13098 Thioredoxin-like domain 117 243 1.0E-22 T 13-10-2018 IPR012336 Thioredoxin-like fold P40_06600 4688eebf64850120766da1f8a329a6a6 245 Gene3D G3DSA:3.10.450.70 24 86 1.6E-9 T 13-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 P40_06600 4688eebf64850120766da1f8a329a6a6 245 SUPERFAMILY SSF54423 27 88 9.55E-8 T 13-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 P40_06600 4688eebf64850120766da1f8a329a6a6 245 Gene3D G3DSA:3.40.30.10 87 244 7.9E-43 T 13-10-2018 P40_06600 4688eebf64850120766da1f8a329a6a6 245 SUPERFAMILY SSF52833 97 244 7.49E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_06600 4688eebf64850120766da1f8a329a6a6 245 Pfam PF10411 Disulfide bond isomerase protein N-terminus 29 85 1.2E-13 T 13-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal P40_18305 7ec710626b385ead9fef6cc3622497a5 231 PIRSF PIRSF002155 1 227 2.4E-79 T 13-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18305 7ec710626b385ead9fef6cc3622497a5 231 Gene3D G3DSA:3.40.50.790 68 159 7.2E-80 T 13-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich P40_18305 7ec710626b385ead9fef6cc3622497a5 231 SUPERFAMILY SSF56808 6 225 6.41E-82 T 13-10-2018 IPR023674 Ribosomal protein L1-like P40_18305 7ec710626b385ead9fef6cc3622497a5 231 Pfam PF00687 Ribosomal protein L1p/L10e family 33 220 2.1E-53 T 13-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein P40_18305 7ec710626b385ead9fef6cc3622497a5 231 Gene3D G3DSA:3.30.190.20 25 221 7.2E-80 T 13-10-2018 P40_18305 7ec710626b385ead9fef6cc3622497a5 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 13-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18305 7ec710626b385ead9fef6cc3622497a5 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.6E-104 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 P40_18305 7ec710626b385ead9fef6cc3622497a5 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.42 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 P40_15930 6157791354c5e6e2a81b5db9b40acddd 350 Pfam PF01339 CheB methylesterase 159 337 6.5E-62 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 P40_15930 6157791354c5e6e2a81b5db9b40acddd 350 SMART SM00448 4 116 1.2E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_15930 6157791354c5e6e2a81b5db9b40acddd 350 Pfam PF00072 Response regulator receiver domain 6 109 5.9E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_15930 6157791354c5e6e2a81b5db9b40acddd 350 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.073 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 P40_15930 6157791354c5e6e2a81b5db9b40acddd 350 Gene3D G3DSA:3.40.50.180 148 348 2.5E-80 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal P40_15930 6157791354c5e6e2a81b5db9b40acddd 350 SUPERFAMILY SSF52172 1 108 4.41E-29 T 13-10-2018 IPR011006 CheY-like superfamily P40_15930 6157791354c5e6e2a81b5db9b40acddd 350 PIRSF PIRSF000876 1 346 1.4E-135 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 P40_15930 6157791354c5e6e2a81b5db9b40acddd 350 Gene3D G3DSA:3.40.50.2300 1 133 2.3E-31 T 13-10-2018 P40_15930 6157791354c5e6e2a81b5db9b40acddd 350 SUPERFAMILY SSF52738 156 341 3.14E-74 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal P40_14955 a9ff7acf7282ef73d1e5a9f1d6ec0cb2 339 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 87 1.2E-23 T 13-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 P40_14955 a9ff7acf7282ef73d1e5a9f1d6ec0cb2 339 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 338 9.7E-102 T 13-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 P40_14955 a9ff7acf7282ef73d1e5a9f1d6ec0cb2 339 SUPERFAMILY SSF55681 92 338 1.23E-81 T 13-10-2018 P40_14955 a9ff7acf7282ef73d1e5a9f1d6ec0cb2 339 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 338 49.094 T 13-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 P40_14955 a9ff7acf7282ef73d1e5a9f1d6ec0cb2 339 Pfam PF01409 tRNA synthetases class II core domain (F) 92 338 7.8E-103 T 13-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 P40_14955 a9ff7acf7282ef73d1e5a9f1d6ec0cb2 339 SUPERFAMILY SSF46589 12 99 1.67E-21 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 P40_14955 a9ff7acf7282ef73d1e5a9f1d6ec0cb2 339 Gene3D G3DSA:3.30.930.10 7 339 4.5E-118 T 13-10-2018 P40_07310 1efc634e857d94c6f3f65ac48ceba256 201 SUPERFAMILY SSF52172 5 191 2.13E-50 T 13-10-2018 IPR011006 CheY-like superfamily P40_07310 1efc634e857d94c6f3f65ac48ceba256 201 Gene3D G3DSA:3.40.50.2300 1 137 4.7E-18 T 13-10-2018 P40_07310 1efc634e857d94c6f3f65ac48ceba256 201 PIRSF PIRSF036382 1 198 3.1E-54 T 13-10-2018 IPR008327 Signal transduction response regulator, antiterminator P40_07310 1efc634e857d94c6f3f65ac48ceba256 201 Pfam PF00072 Response regulator receiver domain 11 112 1.2E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_07310 1efc634e857d94c6f3f65ac48ceba256 201 SMART SM00448 9 120 7.3E-7 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_07310 1efc634e857d94c6f3f65ac48ceba256 201 SMART SM01012 136 191 1.8E-23 T 13-10-2018 IPR005561 ANTAR domain GO:0003723 P40_07310 1efc634e857d94c6f3f65ac48ceba256 201 Pfam PF03861 ANTAR domain 139 191 3.8E-19 T 13-10-2018 IPR005561 ANTAR domain GO:0003723 P40_07310 1efc634e857d94c6f3f65ac48ceba256 201 Gene3D G3DSA:1.10.10.10 139 198 2.3E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_02350 5e74258c9643a977876b44b719c06a33 558 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 464 475 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 P40_02350 5e74258c9643a977876b44b719c06a33 558 Pfam PF00920 Dehydratase family 38 553 7.5E-211 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 P40_02350 5e74258c9643a977876b44b719c06a33 558 Gene3D G3DSA:3.50.30.80 378 527 4.4E-52 T 13-10-2018 P40_02350 5e74258c9643a977876b44b719c06a33 558 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 126 136 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 P40_02350 5e74258c9643a977876b44b719c06a33 558 SUPERFAMILY SSF143975 5 376 2.09E-131 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 P40_02350 5e74258c9643a977876b44b719c06a33 558 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 21 556 5.0E-222 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 P40_02350 5e74258c9643a977876b44b719c06a33 558 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 8 556 44.381 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 P40_02350 5e74258c9643a977876b44b719c06a33 558 SUPERFAMILY SSF52016 379 556 1.73E-56 T 13-10-2018 P40_09835 cf010168308f0ae516be0c9ee3efd365 439 SUPERFAMILY SSF56935 23 439 1.47E-15 T 13-10-2018 P40_09835 cf010168308f0ae516be0c9ee3efd365 439 Gene3D G3DSA:2.40.160.60 19 439 2.6E-19 T 13-10-2018 P40_09835 cf010168308f0ae516be0c9ee3efd365 439 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 290 409 7.4E-8 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) P40_14055 347191b39ada46b2aeeb2d315ebaac2f 248 Pfam PF14234 Domain of unknown function (DUF4336) 40 169 3.1E-9 T 13-10-2018 IPR025638 Protein of unknown function DUF4336 P40_14055 347191b39ada46b2aeeb2d315ebaac2f 248 SUPERFAMILY SSF56281 36 246 6.09E-15 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_04180 01fedf480e1e61b38c303a2062e4513c 430 Gene3D G3DSA:3.40.640.10 57 320 2.4E-105 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_04180 01fedf480e1e61b38c303a2062e4513c 430 Gene3D G3DSA:3.90.1150.10 21 410 2.4E-105 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_04180 01fedf480e1e61b38c303a2062e4513c 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_04180 01fedf480e1e61b38c303a2062e4513c 430 Pfam PF00202 Aminotransferase class-III 19 411 1.7E-74 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_04180 01fedf480e1e61b38c303a2062e4513c 430 SUPERFAMILY SSF53383 5 415 3.84E-106 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_04180 01fedf480e1e61b38c303a2062e4513c 430 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 4 414 9.9E-199 T 13-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 P40_04180 01fedf480e1e61b38c303a2062e4513c 430 PIRSF PIRSF000521 182 416 5.5E-31 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_04180 01fedf480e1e61b38c303a2062e4513c 430 PIRSF PIRSF000521 5 131 2.8E-6 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_04180 01fedf480e1e61b38c303a2062e4513c 430 PIRSF PIRSF000521 123 157 5.0 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_04180 01fedf480e1e61b38c303a2062e4513c 430 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 4 418 1.0E-149 T 13-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 P40_12955 2e00e8d5506ea448b56a5a6f26431025 389 PIRSF PIRSF001554 1 388 4.4E-155 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P40_12955 2e00e8d5506ea448b56a5a6f26431025 389 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.312 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P40_12955 2e00e8d5506ea448b56a5a6f26431025 389 SUPERFAMILY SSF56059 1 238 6.87E-82 T 13-10-2018 P40_12955 2e00e8d5506ea448b56a5a6f26431025 389 Pfam PF08442 ATP-grasp domain 2 203 4.3E-84 T 13-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P40_12955 2e00e8d5506ea448b56a5a6f26431025 389 Gene3D G3DSA:3.40.50.261 240 388 2.1E-55 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_12955 2e00e8d5506ea448b56a5a6f26431025 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.9E-174 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P40_12955 2e00e8d5506ea448b56a5a6f26431025 389 Pfam PF00549 CoA-ligase 262 382 1.9E-24 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_12955 2e00e8d5506ea448b56a5a6f26431025 389 Gene3D G3DSA:3.30.1490.20 21 104 3.9E-97 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_12955 2e00e8d5506ea448b56a5a6f26431025 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 13-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_12955 2e00e8d5506ea448b56a5a6f26431025 389 SUPERFAMILY SSF52210 239 384 3.92E-51 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_12955 2e00e8d5506ea448b56a5a6f26431025 389 Gene3D G3DSA:3.30.470.20 1 234 3.9E-97 T 13-10-2018 P40_17435 bf7364bc230c81cd512a0d258101e3a6 742 SUPERFAMILY SSF52540 150 651 3.9E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_17435 bf7364bc230c81cd512a0d258101e3a6 742 Gene3D G3DSA:3.40.50.300 422 653 3.5E-28 T 13-10-2018 P40_17435 bf7364bc230c81cd512a0d258101e3a6 742 Gene3D G3DSA:3.40.50.300 167 252 1.5E-9 T 13-10-2018 P40_17435 bf7364bc230c81cd512a0d258101e3a6 742 Pfam PF12696 TraM recognition site of TraD and TraG 502 630 7.2E-12 T 13-10-2018 IPR032689 TraD/TraG, TraM recognition site P40_17435 bf7364bc230c81cd512a0d258101e3a6 742 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 651 1.1E-256 T 13-10-2018 IPR022458 Conjugative coupling factor TraG/TraD P40_17435 bf7364bc230c81cd512a0d258101e3a6 742 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 651 0.0 T 13-10-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 P40_21015 1f05e48a3d1d518c21e836ffd43c2e1b 319 Pfam PF00005 ABC transporter 21 163 5.2E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_21015 1f05e48a3d1d518c21e836ffd43c2e1b 319 SMART SM00382 30 214 2.5E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_21015 1f05e48a3d1d518c21e836ffd43c2e1b 319 Gene3D G3DSA:3.40.50.300 1 237 6.5E-65 T 13-10-2018 P40_21015 1f05e48a3d1d518c21e836ffd43c2e1b 319 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_21015 1f05e48a3d1d518c21e836ffd43c2e1b 319 SUPERFAMILY SSF52540 2 226 5.53E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18485 53080c6c8a8428ebb52aaeeda3461093 321 Gene3D G3DSA:1.20.1270.170 146 310 5.3E-109 T 13-10-2018 P40_18485 53080c6c8a8428ebb52aaeeda3461093 321 Gene3D G3DSA:3.30.200.70 10 105 5.3E-109 T 13-10-2018 P40_18485 53080c6c8a8428ebb52aaeeda3461093 321 Gene3D G3DSA:1.10.510.10 57 261 5.3E-109 T 13-10-2018 P40_18485 53080c6c8a8428ebb52aaeeda3461093 321 Pfam PF01636 Phosphotransferase enzyme family 34 256 2.1E-35 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase P40_18485 53080c6c8a8428ebb52aaeeda3461093 321 SUPERFAMILY SSF56112 1 320 5.39E-73 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_18485 53080c6c8a8428ebb52aaeeda3461093 321 Hamap MF_01497 Stress response kinase A [srkA]. 1 321 43.258 T 13-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 P40_08815 5dc07196660fc269aeb7d545eb0c333d 380 Pfam PF01734 Patatin-like phospholipase 11 222 1.3E-20 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 P40_08815 5dc07196660fc269aeb7d545eb0c333d 380 Gene3D G3DSA:3.40.1090.10 2 114 6.7E-20 T 13-10-2018 P40_08815 5dc07196660fc269aeb7d545eb0c333d 380 Gene3D G3DSA:3.40.1090.10 115 246 1.8E-6 T 13-10-2018 P40_08815 5dc07196660fc269aeb7d545eb0c333d 380 SUPERFAMILY SSF52151 6 272 6.02E-47 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase P40_09930 804606f621a4307e0d67db550827500b 470 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 411 420 - T 13-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 P40_09930 804606f621a4307e0d67db550827500b 470 Gene3D G3DSA:1.10.630.10 45 470 6.2E-111 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_09930 804606f621a4307e0d67db550827500b 470 SUPERFAMILY SSF48264 77 461 3.01E-80 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_09930 804606f621a4307e0d67db550827500b 470 PRINTS PR00359 B-class P450 signature 210 225 2.4E-32 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 P40_09930 804606f621a4307e0d67db550827500b 470 PRINTS PR00359 B-class P450 signature 418 429 2.4E-32 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 P40_09930 804606f621a4307e0d67db550827500b 470 PRINTS PR00359 B-class P450 signature 409 418 2.4E-32 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 P40_09930 804606f621a4307e0d67db550827500b 470 PRINTS PR00359 B-class P450 signature 342 353 2.4E-32 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 P40_09930 804606f621a4307e0d67db550827500b 470 PRINTS PR00359 B-class P450 signature 359 386 2.4E-32 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 P40_09930 804606f621a4307e0d67db550827500b 470 PRINTS PR00359 B-class P450 signature 387 402 2.4E-32 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 P40_09930 804606f621a4307e0d67db550827500b 470 PRINTS PR00359 B-class P450 signature 147 158 2.4E-32 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 P40_09930 804606f621a4307e0d67db550827500b 470 Pfam PF00067 Cytochrome P450 338 442 4.1E-18 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_05330 5c21b1313093cbefb60e6e8a1e7918c0 67 Gene3D G3DSA:2.40.50.140 3 67 3.1E-23 T 13-10-2018 P40_05330 5c21b1313093cbefb60e6e8a1e7918c0 67 PIRSF PIRSF002599 1 67 6.8E-19 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 P40_05330 5c21b1313093cbefb60e6e8a1e7918c0 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 13-10-2018 IPR019844 Cold-shock conserved site P40_05330 5c21b1313093cbefb60e6e8a1e7918c0 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 3.0E-21 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 P40_05330 5c21b1313093cbefb60e6e8a1e7918c0 67 PRINTS PR00050 Cold shock protein signature 24 33 6.9E-12 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 P40_05330 5c21b1313093cbefb60e6e8a1e7918c0 67 PRINTS PR00050 Cold shock protein signature 4 19 6.9E-12 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 P40_05330 5c21b1313093cbefb60e6e8a1e7918c0 67 PRINTS PR00050 Cold shock protein signature 39 57 6.9E-12 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 P40_05330 5c21b1313093cbefb60e6e8a1e7918c0 67 SUPERFAMILY SSF50249 1 65 4.5E-20 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_05330 5c21b1313093cbefb60e6e8a1e7918c0 67 SMART SM00357 3 66 1.2E-14 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 P40_05735 525f9b96fa00f1c004361419baade1d0 680 SUPERFAMILY SSF56935 11 663 9.52E-84 T 13-10-2018 P40_05735 525f9b96fa00f1c004361419baade1d0 680 Gene3D G3DSA:2.170.130.10 5 138 1.1E-28 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_05735 525f9b96fa00f1c004361419baade1d0 680 Pfam PF07715 TonB-dependent Receptor Plug Domain 19 128 7.3E-21 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_05735 525f9b96fa00f1c004361419baade1d0 680 Pfam PF00593 TonB dependent receptor 248 636 6.3E-18 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_05760 625b104728100f6a4f3c407c60ef2553 523 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 2.6E-7 T 13-10-2018 P40_05760 625b104728100f6a4f3c407c60ef2553 523 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 2.6E-7 T 13-10-2018 P40_05760 625b104728100f6a4f3c407c60ef2553 523 PRINTS PR00096 Glutamine amidotransferase superfamily signature 175 188 2.6E-7 T 13-10-2018 P40_05760 625b104728100f6a4f3c407c60ef2553 523 Pfam PF00117 Glutamine amidotransferase class-I 11 197 1.5E-41 T 13-10-2018 IPR017926 Glutamine amidotransferase P40_05760 625b104728100f6a4f3c407c60ef2553 523 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 523 55.908 T 13-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 P40_05760 625b104728100f6a4f3c407c60ef2553 523 Pfam PF02540 NAD synthase 212 293 4.6E-9 T 13-10-2018 IPR022310 NAD/GMP synthase P40_05760 625b104728100f6a4f3c407c60ef2553 523 PRINTS PR00097 Anthranilate synthase component II signature 175 188 3.8E-6 T 13-10-2018 P40_05760 625b104728100f6a4f3c407c60ef2553 523 PRINTS PR00097 Anthranilate synthase component II signature 53 62 3.8E-6 T 13-10-2018 P40_05760 625b104728100f6a4f3c407c60ef2553 523 PRINTS PR00097 Anthranilate synthase component II signature 80 91 3.8E-6 T 13-10-2018 P40_05760 625b104728100f6a4f3c407c60ef2553 523 SUPERFAMILY SSF52317 6 235 3.28E-58 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_05760 625b104728100f6a4f3c407c60ef2553 523 Gene3D G3DSA:3.40.50.620 207 403 1.4E-77 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_05760 625b104728100f6a4f3c407c60ef2553 523 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 9.2E-5 T 13-10-2018 P40_05760 625b104728100f6a4f3c407c60ef2553 523 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 9.2E-5 T 13-10-2018 P40_05760 625b104728100f6a4f3c407c60ef2553 523 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 9.2E-5 T 13-10-2018 P40_05760 625b104728100f6a4f3c407c60ef2553 523 Gene3D G3DSA:3.30.300.10 404 523 1.5E-52 T 13-10-2018 P40_05760 625b104728100f6a4f3c407c60ef2553 523 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 203 2.9E-77 T 13-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 P40_05760 625b104728100f6a4f3c407c60ef2553 523 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 210 523 3.4E-151 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 P40_05760 625b104728100f6a4f3c407c60ef2553 523 SUPERFAMILY SSF52402 195 420 1.94E-58 T 13-10-2018 P40_05760 625b104728100f6a4f3c407c60ef2553 523 SUPERFAMILY SSF54810 403 523 7.72E-51 T 13-10-2018 P40_05760 625b104728100f6a4f3c407c60ef2553 523 Pfam PF00958 GMP synthase C terminal domain 431 522 1.6E-43 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 P40_05760 625b104728100f6a4f3c407c60ef2553 523 Gene3D G3DSA:3.40.50.880 8 204 4.2E-55 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_02300 c1015598a180ed8cf50d8f98eca0c0d2 476 SUPERFAMILY SSF63829 179 368 3.27E-7 T 13-10-2018 P40_02300 c1015598a180ed8cf50d8f98eca0c0d2 476 Pfam PF13449 Esterase-like activity of phytase 68 442 1.2E-53 T 13-10-2018 IPR027372 Phytase-like domain P40_14800 f14ef8089b34657ad807585e6c70bc11 249 Pfam PF05275 Copper resistance protein B precursor (CopB) 40 247 1.0E-67 T 13-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 P40_15215 379470100b88a6b46b9e92d818fb831c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.1E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15215 379470100b88a6b46b9e92d818fb831c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.1E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15215 379470100b88a6b46b9e92d818fb831c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15215 379470100b88a6b46b9e92d818fb831c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.1E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15215 379470100b88a6b46b9e92d818fb831c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.1E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15215 379470100b88a6b46b9e92d818fb831c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.1E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15215 379470100b88a6b46b9e92d818fb831c 246 Gene3D G3DSA:3.40.50.720 8 246 9.6E-76 T 13-10-2018 P40_15215 379470100b88a6b46b9e92d818fb831c 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 1.6E-57 T 13-10-2018 P40_15215 379470100b88a6b46b9e92d818fb831c 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 0.0065 T 13-10-2018 P40_15215 379470100b88a6b46b9e92d818fb831c 246 SUPERFAMILY SSF51735 8 245 5.92E-76 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_15215 379470100b88a6b46b9e92d818fb831c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.2E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15215 379470100b88a6b46b9e92d818fb831c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.2E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15215 379470100b88a6b46b9e92d818fb831c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.2E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_16235 847829012b7aa77b0273b37c1870fa3a 670 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 44 652 1.1E-175 T 13-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ P40_16235 847829012b7aa77b0273b37c1870fa3a 670 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 136 571 1.8E-100 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_04110 3d3627851c0f9dae82c32245db632abe 180 SUPERFAMILY SSF49401 25 180 2.09E-26 T 13-10-2018 IPR008966 Adhesion domain superfamily P40_04110 3d3627851c0f9dae82c32245db632abe 180 Gene3D G3DSA:2.60.40.1090 25 180 1.3E-32 T 13-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 P40_04110 3d3627851c0f9dae82c32245db632abe 180 Pfam PF16970 Type-1 fimbrial protein, A 51 180 2.1E-20 T 13-10-2018 IPR039458 Type-1 fimbrial protein, A P40_02215 049b59f12ddbecab439998d25ae02350 156 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 5 110 1.3E-17 T 13-10-2018 IPR012659 Conserved hypothetical protein CHP02444 P40_02215 049b59f12ddbecab439998d25ae02350 156 Pfam PF09523 Protein of unknown function (DUF2390) 5 108 1.9E-24 T 13-10-2018 IPR012659 Conserved hypothetical protein CHP02444 P40_16165 73a6ad2b7f32b50126998e331e8a1790 411 Gene3D G3DSA:3.20.20.450 65 211 6.1E-9 T 13-10-2018 IPR035919 EAL domain superfamily P40_16165 73a6ad2b7f32b50126998e331e8a1790 411 Gene3D G3DSA:1.10.3210.10 212 373 6.6E-26 T 13-10-2018 P40_16165 73a6ad2b7f32b50126998e331e8a1790 411 Pfam PF00563 EAL domain 90 200 1.0E-6 T 13-10-2018 IPR001633 EAL domain P40_16165 73a6ad2b7f32b50126998e331e8a1790 411 PIRSF PIRSF003180 13 408 1.8E-72 T 13-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing P40_16165 73a6ad2b7f32b50126998e331e8a1790 411 SUPERFAMILY SSF141868 60 205 1.01E-12 T 13-10-2018 IPR035919 EAL domain superfamily P40_16165 73a6ad2b7f32b50126998e331e8a1790 411 SUPERFAMILY SSF109604 192 377 7.53E-35 T 13-10-2018 P40_16165 73a6ad2b7f32b50126998e331e8a1790 411 Pfam PF08668 HDOD domain 216 346 1.6E-18 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 3.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 PRINTS PR00702 Acriflavin resistance protein family signature 30 54 3.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 PRINTS PR00702 Acriflavin resistance protein family signature 347 370 3.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 PRINTS PR00702 Acriflavin resistance protein family signature 58 76 3.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 3.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 SUPERFAMILY SSF82866 813 1041 1.7E-44 T 13-10-2018 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 Gene3D G3DSA:3.30.70.1430 581 680 8.2E-269 T 13-10-2018 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 Gene3D G3DSA:1.20.1640.10 524 1036 8.2E-269 T 13-10-2018 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 SUPERFAMILY SSF82693 60 149 7.32E-16 T 13-10-2018 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 Gene3D G3DSA:3.30.70.1320 152 343 8.2E-269 T 13-10-2018 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 Gene3D G3DSA:3.30.2090.10 730 817 8.2E-269 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 Gene3D G3DSA:1.20.1640.10 30 523 8.2E-269 T 13-10-2018 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 SUPERFAMILY SSF82714 199 282 3.53E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 Gene3D G3DSA:3.30.70.1440 681 878 8.2E-269 T 13-10-2018 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 Pfam PF00873 AcrB/AcrD/AcrF family 24 1039 2.0E-165 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 Gene3D G3DSA:3.30.2090.10 195 286 8.2E-269 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 SUPERFAMILY SSF82714 739 815 2.22E-11 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 SUPERFAMILY SSF82866 311 505 6.67E-35 T 13-10-2018 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 SUPERFAMILY SSF82693 156 341 7.59E-14 T 13-10-2018 P40_13315 1e0f57032338a012ad5ca1c6781be1ef 1062 Gene3D G3DSA:3.30.70.1430 60 825 8.2E-269 T 13-10-2018 P40_21435 97d916eb2e33a556cda9ca7a87825240 467 Pfam PF13091 PLD-like domain 41 186 3.4E-17 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 P40_21435 97d916eb2e33a556cda9ca7a87825240 467 Pfam PF13091 PLD-like domain 274 407 1.7E-17 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 P40_21435 97d916eb2e33a556cda9ca7a87825240 467 Gene3D G3DSA:3.30.870.10 21 212 2.5E-37 T 13-10-2018 P40_21435 97d916eb2e33a556cda9ca7a87825240 467 SUPERFAMILY SSF56024 273 422 9.87E-26 T 13-10-2018 P40_21435 97d916eb2e33a556cda9ca7a87825240 467 Gene3D G3DSA:3.30.870.10 246 424 5.2E-30 T 13-10-2018 P40_21435 97d916eb2e33a556cda9ca7a87825240 467 SMART SM00155 358 385 0.0016 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 P40_21435 97d916eb2e33a556cda9ca7a87825240 467 SMART SM00155 127 154 9.1E-5 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 P40_21435 97d916eb2e33a556cda9ca7a87825240 467 SUPERFAMILY SSF56024 19 201 5.38E-39 T 13-10-2018 P40_01785 6f4ae0830548527d0857e46061eddd4e 295 Pfam PF00561 alpha/beta hydrolase fold 30 154 6.7E-19 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_01785 6f4ae0830548527d0857e46061eddd4e 295 SUPERFAMILY SSF53474 10 290 6.25E-61 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_01785 6f4ae0830548527d0857e46061eddd4e 295 PRINTS PR00412 Epoxide hydrolase signature 118 131 4.1E-10 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_01785 6f4ae0830548527d0857e46061eddd4e 295 PRINTS PR00412 Epoxide hydrolase signature 104 117 4.1E-10 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_01785 6f4ae0830548527d0857e46061eddd4e 295 PRINTS PR00412 Epoxide hydrolase signature 266 288 4.1E-10 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_01785 6f4ae0830548527d0857e46061eddd4e 295 PRINTS PR00412 Epoxide hydrolase signature 35 53 4.1E-10 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_01785 6f4ae0830548527d0857e46061eddd4e 295 Gene3D G3DSA:3.40.50.1820 11 292 4.7E-80 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_08755 c3040fe642a30df5193da31cece67a33 1149 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 29 1103 27.833 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 P40_08755 c3040fe642a30df5193da31cece67a33 1149 SUPERFAMILY SSF52540 25 341 1.66E-95 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_08755 c3040fe642a30df5193da31cece67a33 1149 SMART SM00487 597 787 1.7E-32 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_08755 c3040fe642a30df5193da31cece67a33 1149 Gene3D G3DSA:3.40.50.300 478 987 1.6E-235 T 13-10-2018 P40_08755 c3040fe642a30df5193da31cece67a33 1149 Pfam PF00270 DEAD/DEAH box helicase 602 762 1.2E-19 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 P40_08755 c3040fe642a30df5193da31cece67a33 1149 Gene3D G3DSA:3.40.50.300 539 778 1.6E-235 T 13-10-2018 P40_08755 c3040fe642a30df5193da31cece67a33 1149 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 149 1078 0.0 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 P40_08755 c3040fe642a30df5193da31cece67a33 1149 SUPERFAMILY SSF143517 991 1144 7.45E-42 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain P40_08755 c3040fe642a30df5193da31cece67a33 1149 Gene3D G3DSA:3.90.1150.50 1002 1147 1.1E-40 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain P40_08755 c3040fe642a30df5193da31cece67a33 1149 SMART SM00982 1005 1105 7.4E-47 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 P40_08755 c3040fe642a30df5193da31cece67a33 1149 Gene3D G3DSA:3.30.2060.10 132 217 1.6E-113 T 13-10-2018 P40_08755 c3040fe642a30df5193da31cece67a33 1149 SMART SM01058 478 573 2.1E-48 T 13-10-2018 IPR003711 CarD-like/TRCF domain P40_08755 c3040fe642a30df5193da31cece67a33 1149 SMART SM00490 823 907 4.9E-16 T 13-10-2018 IPR001650 Helicase, C-terminal P40_08755 c3040fe642a30df5193da31cece67a33 1149 Gene3D G3DSA:2.30.30.840 482 538 1.6E-235 T 13-10-2018 P40_08755 c3040fe642a30df5193da31cece67a33 1149 Pfam PF03461 TRCF domain 1006 1097 4.3E-26 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 P40_08755 c3040fe642a30df5193da31cece67a33 1149 Pfam PF02559 CarD-like/TRCF domain 479 572 7.1E-26 T 13-10-2018 IPR003711 CarD-like/TRCF domain P40_08755 c3040fe642a30df5193da31cece67a33 1149 SUPERFAMILY SSF52540 779 987 2.72E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_08755 c3040fe642a30df5193da31cece67a33 1149 SUPERFAMILY SSF52540 522 780 9.37E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_08755 c3040fe642a30df5193da31cece67a33 1149 Pfam PF00271 Helicase conserved C-terminal domain 802 906 1.4E-15 T 13-10-2018 IPR001650 Helicase, C-terminal P40_08755 c3040fe642a30df5193da31cece67a33 1149 SUPERFAMILY SSF52540 349 463 4.6E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_08755 c3040fe642a30df5193da31cece67a33 1149 Gene3D G3DSA:3.40.50.11180 28 335 1.6E-113 T 13-10-2018 P40_08755 c3040fe642a30df5193da31cece67a33 1149 Gene3D G3DSA:3.40.50.11140 353 451 5.2E-10 T 13-10-2018 P40_08755 c3040fe642a30df5193da31cece67a33 1149 SUPERFAMILY SSF141259 470 545 1.83E-21 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily P40_20085 924c774b5d639fad163ae3014eaee82e 212 Gene3D G3DSA:3.40.50.2300 3 134 5.0E-43 T 13-10-2018 P40_20085 924c774b5d639fad163ae3014eaee82e 212 SUPERFAMILY SSF46894 140 202 1.74E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_20085 924c774b5d639fad163ae3014eaee82e 212 SMART SM00448 8 119 8.2E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_20085 924c774b5d639fad163ae3014eaee82e 212 SUPERFAMILY SSF52172 9 157 3.84E-31 T 13-10-2018 IPR011006 CheY-like superfamily P40_20085 924c774b5d639fad163ae3014eaee82e 212 SMART SM00421 143 200 1.8E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20085 924c774b5d639fad163ae3014eaee82e 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 200 3.5E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20085 924c774b5d639fad163ae3014eaee82e 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20085 924c774b5d639fad163ae3014eaee82e 212 Gene3D G3DSA:1.10.10.10 137 202 4.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_20085 924c774b5d639fad163ae3014eaee82e 212 Pfam PF00072 Response regulator receiver domain 10 119 3.1E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_20085 924c774b5d639fad163ae3014eaee82e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.8E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20085 924c774b5d639fad163ae3014eaee82e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.8E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20085 924c774b5d639fad163ae3014eaee82e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.8E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_13285 2c91a0faea6f4ad0b6aec35c90c6e2f5 742 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 132 709 5.2E-83 T 13-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 P40_13285 2c91a0faea6f4ad0b6aec35c90c6e2f5 742 SMART SM00849 504 680 1.6E-4 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_13285 2c91a0faea6f4ad0b6aec35c90c6e2f5 742 SUPERFAMILY SSF56281 491 713 4.2E-37 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_13285 2c91a0faea6f4ad0b6aec35c90c6e2f5 742 Gene3D G3DSA:3.60.15.10 493 722 8.9E-43 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_13285 2c91a0faea6f4ad0b6aec35c90c6e2f5 742 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 232 406 7.9E-15 T 13-10-2018 IPR004477 ComEC/Rec2-related protein P40_13285 2c91a0faea6f4ad0b6aec35c90c6e2f5 742 Pfam PF13567 Domain of unknown function (DUF4131) 18 175 5.1E-14 T 13-10-2018 IPR025405 Domain of unknown function DUF4131 P40_13285 2c91a0faea6f4ad0b6aec35c90c6e2f5 742 Pfam PF03772 Competence protein 211 463 2.6E-48 T 13-10-2018 IPR004477 ComEC/Rec2-related protein P40_13285 2c91a0faea6f4ad0b6aec35c90c6e2f5 742 Pfam PF00753 Metallo-beta-lactamase superfamily 502 567 3.2E-7 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_09875 78bd8674069eadb737a932b5842f7cfa 152 PIRSF PIRSF018072 1 150 6.7E-42 T 13-10-2018 IPR016709 Uncharacterised protein family UPF0336 P40_09875 78bd8674069eadb737a932b5842f7cfa 152 Pfam PF13452 N-terminal half of MaoC dehydratase 6 137 6.3E-43 T 13-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 P40_09875 78bd8674069eadb737a932b5842f7cfa 152 SUPERFAMILY SSF54637 6 147 1.79E-35 T 13-10-2018 IPR029069 HotDog domain superfamily P40_09875 78bd8674069eadb737a932b5842f7cfa 152 Gene3D G3DSA:3.10.129.10 1 152 6.4E-38 T 13-10-2018 P40_20460 ea478131e0e9e5c5711a2980f74c6d3f 523 ProSitePatterns PS00455 Putative AMP-binding domain signature. 179 190 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_20460 ea478131e0e9e5c5711a2980f74c6d3f 523 Pfam PF00501 AMP-binding enzyme 24 427 8.2E-106 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_20460 ea478131e0e9e5c5711a2980f74c6d3f 523 Gene3D G3DSA:3.40.50.12780 5 420 8.1E-114 T 13-10-2018 P40_20460 ea478131e0e9e5c5711a2980f74c6d3f 523 Gene3D G3DSA:3.30.300.310 423 523 5.4E-31 T 13-10-2018 P40_20460 ea478131e0e9e5c5711a2980f74c6d3f 523 SUPERFAMILY SSF56801 15 523 3.53E-155 T 13-10-2018 P40_20460 ea478131e0e9e5c5711a2980f74c6d3f 523 Pfam PF13193 AMP-binding enzyme C-terminal domain 437 511 4.4E-22 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_07335 965fc218c2fd2bffd5e8ea4575c1aed5 155 Pfam PF01928 CYTH domain 3 142 2.5E-11 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 P40_07335 965fc218c2fd2bffd5e8ea4575c1aed5 155 PIRSF PIRSF016487 1 155 2.1E-56 T 13-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like P40_07335 965fc218c2fd2bffd5e8ea4575c1aed5 155 Gene3D G3DSA:2.40.320.10 1 150 5.5E-47 T 13-10-2018 P40_07335 965fc218c2fd2bffd5e8ea4575c1aed5 155 SMART SM01118 2 148 5.1E-25 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 P40_07335 965fc218c2fd2bffd5e8ea4575c1aed5 155 SUPERFAMILY SSF55154 1 149 2.94E-41 T 13-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 P40_17570 c4ba20c2ddadc0f37bdbe488847c90c3 60 Pfam PF02599 Global regulator protein family 10 60 3.7E-16 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 P40_17570 c4ba20c2ddadc0f37bdbe488847c90c3 60 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 10 58 2.0E-8 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 P40_17570 c4ba20c2ddadc0f37bdbe488847c90c3 60 SUPERFAMILY SSF117130 9 59 3.14E-12 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 P40_17570 c4ba20c2ddadc0f37bdbe488847c90c3 60 Gene3D G3DSA:3.30.70.1680 10 60 1.8E-17 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 P40_14460 2eb8f46599c12e150d8619eecf7af88f 89 Pfam PF07498 Rho termination factor, N-terminal domain 60 86 3.8E-6 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 P40_07590 879e8f909299ab14385e6fcd498e9ba5 448 Gene3D G3DSA:1.20.1250.20 7 441 1.4E-81 T 13-10-2018 P40_07590 879e8f909299ab14385e6fcd498e9ba5 448 Pfam PF07690 Major Facilitator Superfamily 34 400 7.9E-50 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_07590 879e8f909299ab14385e6fcd498e9ba5 448 SUPERFAMILY SSF103473 17 436 4.32E-83 T 13-10-2018 IPR036259 MFS transporter superfamily P40_17180 0d31835edee6d56ee7dffa160346c08b 283 SUPERFAMILY SSF103481 40 136 3.01E-6 T 13-10-2018 P40_17180 0d31835edee6d56ee7dffa160346c08b 283 SUPERFAMILY SSF103481 181 276 2.88E-14 T 13-10-2018 P40_17180 0d31835edee6d56ee7dffa160346c08b 283 Pfam PF00892 EamA-like transporter family 147 275 4.7E-16 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_17180 0d31835edee6d56ee7dffa160346c08b 283 Pfam PF00892 EamA-like transporter family 8 133 1.8E-10 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_06685 afa2c363c47fd848da44fda087134a49 1856 Pfam PF01835 MG2 domain 622 704 1.5E-14 T 13-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 P40_06685 afa2c363c47fd848da44fda087134a49 1856 Pfam PF00207 Alpha-2-macroglobulin family 1195 1279 1.0E-6 T 13-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 P40_06685 afa2c363c47fd848da44fda087134a49 1856 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1391 1415 2.1E-8 T 13-10-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming P40_06685 afa2c363c47fd848da44fda087134a49 1856 SMART SM01359 981 1124 1.3E-38 T 13-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 P40_06685 afa2c363c47fd848da44fda087134a49 1856 Gene3D G3DSA:2.60.40.1930 622 717 1.2E-5 T 13-10-2018 P40_06685 afa2c363c47fd848da44fda087134a49 1856 Gene3D G3DSA:1.50.10.20 1387 1643 5.8E-28 T 13-10-2018 P40_06685 afa2c363c47fd848da44fda087134a49 1856 SMART SM01360 1187 1280 1.2E-16 T 13-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 P40_06685 afa2c363c47fd848da44fda087134a49 1856 SUPERFAMILY SSF48239 1389 1642 4.36E-37 T 13-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid P40_06685 afa2c363c47fd848da44fda087134a49 1856 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 522 615 4.2E-15 T 13-10-2018 P40_06685 afa2c363c47fd848da44fda087134a49 1856 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 982 1123 5.1E-18 T 13-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 P40_11450 b290678de10fa6f8a3a4d3f17bccea75 441 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 2.6E-41 T 13-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 P40_11450 b290678de10fa6f8a3a4d3f17bccea75 441 Gene3D G3DSA:1.10.3120.10 116 418 5.6E-104 T 13-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 P40_11450 b290678de10fa6f8a3a4d3f17bccea75 441 SUPERFAMILY SSF109998 248 430 9.81E-50 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily P40_11450 b290678de10fa6f8a3a4d3f17bccea75 441 Gene3D G3DSA:3.30.70.1050 1 115 2.4E-37 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 P40_11450 b290678de10fa6f8a3a4d3f17bccea75 441 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 414 2.5E-35 T 13-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 P40_11450 b290678de10fa6f8a3a4d3f17bccea75 441 PIRSF PIRSF003095 1 435 4.5E-127 T 13-10-2018 IPR005215 Trigger factor GO:0015031 P40_11450 b290678de10fa6f8a3a4d3f17bccea75 441 Hamap MF_00303 Trigger factor [tig]. 1 419 21.972 T 13-10-2018 IPR005215 Trigger factor GO:0015031 P40_11450 b290678de10fa6f8a3a4d3f17bccea75 441 SUPERFAMILY SSF102735 1 131 5.75E-39 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 P40_11450 b290678de10fa6f8a3a4d3f17bccea75 441 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 237 7.0E-16 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain P40_11450 b290678de10fa6f8a3a4d3f17bccea75 441 Gene3D G3DSA:3.10.50.40 150 246 5.6E-104 T 13-10-2018 P40_11450 b290678de10fa6f8a3a4d3f17bccea75 441 TIGRFAM TIGR00115 tig: trigger factor 11 413 2.7E-142 T 13-10-2018 IPR005215 Trigger factor GO:0015031 P40_11450 b290678de10fa6f8a3a4d3f17bccea75 441 SUPERFAMILY SSF54534 94 241 8.05E-37 T 13-10-2018 P40_00960 ed8781c59561c27142b1ceb766cf94b7 303 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 119 226 8.2E-23 T 13-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain P40_00960 ed8781c59561c27142b1ceb766cf94b7 303 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 12 297 7.9E-40 T 13-10-2018 IPR017592 Pilus assembly, Flp-type CpaB P40_00960 ed8781c59561c27142b1ceb766cf94b7 303 Pfam PF08666 SAF domain 53 112 2.4E-5 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 P40_00960 ed8781c59561c27142b1ceb766cf94b7 303 SMART SM00858 52 112 5.7E-8 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 P40_18260 f7d50aef74a965b488d0fc9e2deee3b4 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 13-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18260 f7d50aef74a965b488d0fc9e2deee3b4 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 3.4E-35 T 13-10-2018 IPR027486 Ribosomal protein S10 domain P40_18260 f7d50aef74a965b488d0fc9e2deee3b4 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.0E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18260 f7d50aef74a965b488d0fc9e2deee3b4 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.0E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18260 f7d50aef74a965b488d0fc9e2deee3b4 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.0E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18260 f7d50aef74a965b488d0fc9e2deee3b4 103 SUPERFAMILY SSF54999 5 101 1.57E-36 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily P40_18260 f7d50aef74a965b488d0fc9e2deee3b4 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.135 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18260 f7d50aef74a965b488d0fc9e2deee3b4 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 2.8E-46 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18260 f7d50aef74a965b488d0fc9e2deee3b4 103 Gene3D G3DSA:3.30.70.600 1 103 2.0E-37 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily P40_18260 f7d50aef74a965b488d0fc9e2deee3b4 103 SMART SM01403 7 101 1.3E-55 T 13-10-2018 IPR027486 Ribosomal protein S10 domain P40_16735 99cfa1dc5975e857357e6bc6b229dd40 367 Pfam PF13180 PDZ domain 268 358 2.5E-15 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_16735 99cfa1dc5975e857357e6bc6b229dd40 367 SUPERFAMILY SSF50494 45 265 3.1E-62 T 13-10-2018 IPR009003 Peptidase S1, PA clan P40_16735 99cfa1dc5975e857357e6bc6b229dd40 367 Gene3D G3DSA:2.40.10.120 45 262 1.6E-74 T 13-10-2018 P40_16735 99cfa1dc5975e857357e6bc6b229dd40 367 Pfam PF13365 Trypsin-like peptidase domain 95 229 5.7E-32 T 13-10-2018 P40_16735 99cfa1dc5975e857357e6bc6b229dd40 367 SUPERFAMILY SSF50156 226 349 9.86E-23 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 P40_16735 99cfa1dc5975e857357e6bc6b229dd40 367 PRINTS PR00834 HtrA/DegQ protease family signature 125 145 2.4E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_16735 99cfa1dc5975e857357e6bc6b229dd40 367 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 2.4E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_16735 99cfa1dc5975e857357e6bc6b229dd40 367 PRINTS PR00834 HtrA/DegQ protease family signature 104 116 2.4E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_16735 99cfa1dc5975e857357e6bc6b229dd40 367 PRINTS PR00834 HtrA/DegQ protease family signature 165 189 2.4E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_16735 99cfa1dc5975e857357e6bc6b229dd40 367 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 2.4E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_16735 99cfa1dc5975e857357e6bc6b229dd40 367 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 2.4E-52 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_16735 99cfa1dc5975e857357e6bc6b229dd40 367 SMART SM00228 268 350 5.0E-12 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_16735 99cfa1dc5975e857357e6bc6b229dd40 367 Gene3D G3DSA:2.30.42.10 266 365 7.0E-24 T 13-10-2018 P40_17765 4e2b88fafece170173d2416ecc7ddc14 262 Pfam PF01066 CDP-alcohol phosphatidyltransferase 36 99 1.6E-11 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 P40_17765 4e2b88fafece170173d2416ecc7ddc14 262 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 43 203 6.6E-38 T 13-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 P40_17765 4e2b88fafece170173d2416ecc7ddc14 262 Gene3D G3DSA:1.20.120.1760 30 161 3.4E-15 T 13-10-2018 P40_17765 4e2b88fafece170173d2416ecc7ddc14 262 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 77 99 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 Gene3D G3DSA:1.10.287.380 864 936 8.6E-21 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 918 0.0 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 Gene3D G3DSA:3.40.50.620 332 545 2.1E-65 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 Gene3D G3DSA:3.90.740.10 195 331 4.1E-54 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 SUPERFAMILY SSF46589 871 935 5.75E-17 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 SUPERFAMILY SSF52374 1 608 7.78E-138 T 13-10-2018 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 PRINTS PR00986 Valyl-tRNA synthetase signature 227 244 7.5E-36 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 PRINTS PR00986 Valyl-tRNA synthetase signature 473 491 7.5E-36 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 PRINTS PR00986 Valyl-tRNA synthetase signature 343 356 7.5E-36 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 PRINTS PR00986 Valyl-tRNA synthetase signature 33 44 7.5E-36 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 PRINTS PR00986 Valyl-tRNA synthetase signature 442 463 7.5E-36 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 Gene3D G3DSA:3.40.50.620 2 194 7.1E-64 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 SUPERFAMILY SSF47323 609 886 1.4E-73 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 Pfam PF08264 Anticodon-binding domain of tRNA 643 813 5.1E-47 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 Gene3D G3DSA:1.10.730.10 546 804 3.6E-76 T 13-10-2018 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 598 4.2E-225 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 871 936 3.4E-20 T 13-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 SUPERFAMILY SSF50677 187 339 7.33E-65 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 P40_17720 2411d06d5fbbe9708b05d6e49e53b824 938 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 936 16.451 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 P40_15040 ac19b2b9e59c86a56dc6cfc4deaa8e86 81 Gene3D G3DSA:3.30.110.40 1 76 2.3E-25 T 13-10-2018 IPR036868 TusA-like domain superfamily P40_15040 ac19b2b9e59c86a56dc6cfc4deaa8e86 81 Pfam PF01206 Sulfurtransferase TusA 6 73 4.9E-22 T 13-10-2018 IPR001455 TusA-like domain P40_15040 ac19b2b9e59c86a56dc6cfc4deaa8e86 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 13-10-2018 IPR001455 TusA-like domain P40_15040 ac19b2b9e59c86a56dc6cfc4deaa8e86 81 SUPERFAMILY SSF64307 2 73 8.11E-22 T 13-10-2018 IPR036868 TusA-like domain superfamily P40_15660 33380d1a89b6b637d1da65665f0776d9 248 SUPERFAMILY SSF53474 2 239 1.18E-35 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_15660 33380d1a89b6b637d1da65665f0776d9 248 Gene3D G3DSA:3.40.50.1820 1 239 1.5E-43 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_15660 33380d1a89b6b637d1da65665f0776d9 248 Pfam PF01738 Dienelactone hydrolase family 21 238 6.7E-40 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 P40_02975 7df526a440e0191816df6658be19664a 226 SUPERFAMILY SSF109755 32 210 7.67E-11 T 13-10-2018 P40_02975 7df526a440e0191816df6658be19664a 226 Gene3D G3DSA:1.20.58.220 4 226 5.8E-61 T 13-10-2018 IPR038078 PhoU-like domain superfamily P40_02975 7df526a440e0191816df6658be19664a 226 Pfam PF01865 Protein of unknown function DUF47 8 225 8.5E-59 T 13-10-2018 IPR018445 Putative phosphate transport regulator P40_02975 7df526a440e0191816df6658be19664a 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 6 225 5.4E-55 T 13-10-2018 IPR002727 Protein of unknown function DUF47 P40_20055 ad23f00b6a8c355cac179d26c57dcaed 587 SUPERFAMILY SSF47203 288 468 1.01E-44 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_20055 ad23f00b6a8c355cac179d26c57dcaed 587 Gene3D G3DSA:2.40.110.10 160 288 1.5E-27 T 13-10-2018 P40_20055 ad23f00b6a8c355cac179d26c57dcaed 587 Gene3D G3DSA:1.10.540.10 29 158 2.0E-16 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_20055 ad23f00b6a8c355cac179d26c57dcaed 587 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 447 5.4E-26 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_20055 ad23f00b6a8c355cac179d26c57dcaed 587 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 156 7.7E-12 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_20055 ad23f00b6a8c355cac179d26c57dcaed 587 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 464 583 2.8E-20 T 13-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain P40_20055 ad23f00b6a8c355cac179d26c57dcaed 587 Gene3D G3DSA:1.20.140.10 289 452 9.4E-50 T 13-10-2018 P40_20055 ad23f00b6a8c355cac179d26c57dcaed 587 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 269 1.1E-13 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_20055 ad23f00b6a8c355cac179d26c57dcaed 587 SUPERFAMILY SSF56645 38 280 9.95E-58 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_20055 ad23f00b6a8c355cac179d26c57dcaed 587 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 4.9E-10 T 13-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria P40_15360 5606f4248024c404527ed83e5a11fe9e 290 SUPERFAMILY SSF63829 24 280 4.9E-58 T 13-10-2018 P40_15360 5606f4248024c404527ed83e5a11fe9e 290 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 31 265 3.5E-39 T 13-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region P40_15360 5606f4248024c404527ed83e5a11fe9e 290 Gene3D G3DSA:2.120.10.30 21 286 1.5E-59 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_19960 f7fa85a6a88a227b1e61186052cdbdca 334 Pfam PF13609 Gram-negative porin 13 317 8.5E-41 T 13-10-2018 P40_19960 f7fa85a6a88a227b1e61186052cdbdca 334 SUPERFAMILY SSF56935 23 334 1.69E-52 T 13-10-2018 P40_19960 f7fa85a6a88a227b1e61186052cdbdca 334 Gene3D G3DSA:2.40.160.10 16 334 5.1E-58 T 13-10-2018 IPR023614 Porin domain superfamily P40_19670 4e0fed59b67ca759f5091a831710d4a3 437 Gene3D G3DSA:3.20.20.10 54 287 6.8E-36 T 13-10-2018 IPR029066 PLP-binding barrel P40_19670 4e0fed59b67ca759f5091a831710d4a3 437 Pfam PF01168 Alanine racemase, N-terminal domain 51 288 1.6E-24 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_19670 4e0fed59b67ca759f5091a831710d4a3 437 SUPERFAMILY SSF51419 52 290 1.5E-20 T 13-10-2018 IPR029066 PLP-binding barrel P40_21145 9f65c9d4a72e7040a1790502cd69b4cb 284 Gene3D G3DSA:3.40.190.290 172 269 1.6E-5 T 13-10-2018 P40_21145 9f65c9d4a72e7040a1790502cd69b4cb 284 SUPERFAMILY SSF53850 88 274 3.08E-24 T 13-10-2018 P40_21145 9f65c9d4a72e7040a1790502cd69b4cb 284 SUPERFAMILY SSF46785 2 109 1.36E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_21145 9f65c9d4a72e7040a1790502cd69b4cb 284 Pfam PF03466 LysR substrate binding domain 86 269 1.6E-19 T 13-10-2018 IPR005119 LysR, substrate-binding P40_21145 9f65c9d4a72e7040a1790502cd69b4cb 284 Gene3D G3DSA:1.10.10.10 3 84 3.2E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_21145 9f65c9d4a72e7040a1790502cd69b4cb 284 Gene3D G3DSA:3.40.190.10 85 171 5.5E-17 T 13-10-2018 P40_21145 9f65c9d4a72e7040a1790502cd69b4cb 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.0E-11 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 SMART SM00388 526 613 0.0027 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 269 390 1.1E-20 T 13-10-2018 IPR000014 PAS domain P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 SMART SM00387 655 766 2.1E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 Gene3D G3DSA:3.30.450.20 400 519 3.2E-9 T 13-10-2018 P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 SMART SM00091 269 335 3.3E-9 T 13-10-2018 IPR000014 PAS domain P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 SMART SM00091 160 220 290.0 T 13-10-2018 IPR000014 PAS domain P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 SMART SM00091 392 456 0.12 T 13-10-2018 IPR000014 PAS domain P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 SUPERFAMILY SSF47384 517 611 6.08E-7 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 656 764 3.4E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 SUPERFAMILY SSF55785 381 502 9.07E-12 T 13-10-2018 IPR035965 PAS domain superfamily P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 SMART SM00086 341 384 4.0E-5 T 13-10-2018 IPR001610 PAC motif P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 SMART SM00086 462 504 4.8 T 13-10-2018 IPR001610 PAC motif P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 Gene3D G3DSA:3.30.565.10 613 770 1.2E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 PRINTS PR00344 Bacterial sensor protein C-terminal signature 727 745 2.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 PRINTS PR00344 Bacterial sensor protein C-terminal signature 698 712 2.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 PRINTS PR00344 Bacterial sensor protein C-terminal signature 716 726 2.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 Gene3D G3DSA:3.30.450.20 268 399 7.8E-27 T 13-10-2018 P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 Gene3D G3DSA:1.10.287.130 531 611 2.1E-19 T 13-10-2018 P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 Pfam PF08447 PAS fold 293 377 1.2E-10 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 SUPERFAMILY SSF55874 603 768 1.7E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 SUPERFAMILY SSF55785 274 387 6.14E-24 T 13-10-2018 IPR035965 PAS domain superfamily P40_14125 972a9d3b2acfd4fff9c055e916572e92 771 Pfam PF00512 His Kinase A (phospho-acceptor) domain 527 610 1.3E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_13145 43c53e97d4950f6c57c2c6a670e988bb 522 SMART SM00020 4 243 2.4E-49 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 P40_13145 43c53e97d4950f6c57c2c6a670e988bb 522 Gene3D G3DSA:2.40.10.10 122 245 2.8E-33 T 13-10-2018 P40_13145 43c53e97d4950f6c57c2c6a670e988bb 522 Pfam PF00089 Trypsin 5 243 2.2E-42 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 P40_13145 43c53e97d4950f6c57c2c6a670e988bb 522 Gene3D G3DSA:2.40.10.10 17 121 2.1E-20 T 13-10-2018 P40_13145 43c53e97d4950f6c57c2c6a670e988bb 522 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 193 204 - T 13-10-2018 IPR033116 Serine proteases, trypsin family, serine active site P40_13145 43c53e97d4950f6c57c2c6a670e988bb 522 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 47 52 - T 13-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 P40_13145 43c53e97d4950f6c57c2c6a670e988bb 522 SUPERFAMILY SSF50494 5 248 2.45E-56 T 13-10-2018 IPR009003 Peptidase S1, PA clan P40_13145 43c53e97d4950f6c57c2c6a670e988bb 522 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 98 112 9.9E-13 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 P40_13145 43c53e97d4950f6c57c2c6a670e988bb 522 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 192 204 9.9E-13 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 P40_13145 43c53e97d4950f6c57c2c6a670e988bb 522 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 37 52 9.9E-13 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 P40_05380 416e18e32d867d6138b7d158d3addd2f 230 SUPERFAMILY SSF55120 61 227 2.56E-42 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_05380 416e18e32d867d6138b7d158d3addd2f 230 Pfam PF00849 RNA pseudouridylate synthase 62 190 6.6E-12 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_05380 416e18e32d867d6138b7d158d3addd2f 230 Gene3D G3DSA:3.30.70.580 63 227 4.7E-51 T 13-10-2018 P40_05380 416e18e32d867d6138b7d158d3addd2f 230 Gene3D G3DSA:3.10.290.10 1 62 3.6E-14 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 P40_05380 416e18e32d867d6138b7d158d3addd2f 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 4.4E-39 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 P40_05380 416e18e32d867d6138b7d158d3addd2f 230 Pfam PF01479 S4 domain 1 43 3.0E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_05380 416e18e32d867d6138b7d158d3addd2f 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 P40_05380 416e18e32d867d6138b7d158d3addd2f 230 Gene3D G3DSA:3.30.70.1560 128 209 4.7E-51 T 13-10-2018 P40_05380 416e18e32d867d6138b7d158d3addd2f 230 SMART SM00363 1 58 1.4E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_05380 416e18e32d867d6138b7d158d3addd2f 230 SUPERFAMILY SSF55174 1 90 1.7E-12 T 13-10-2018 P40_12835 e440f4ff16e639e0dced2334527bf32f 308 Gene3D G3DSA:1.10.8.10 18 106 3.0E-9 T 13-10-2018 P40_12835 e440f4ff16e639e0dced2334527bf32f 308 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 205 211 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 P40_12835 e440f4ff16e639e0dced2334527bf32f 308 SUPERFAMILY SSF53335 34 270 3.19E-50 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_12835 e440f4ff16e639e0dced2334527bf32f 308 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 20 302 8.9E-78 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 P40_12835 e440f4ff16e639e0dced2334527bf32f 308 PIRSF PIRSF037167 2 308 3.1E-130 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 P40_12835 e440f4ff16e639e0dced2334527bf32f 308 Pfam PF05175 Methyltransferase small domain 137 216 2.9E-14 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 P40_12835 e440f4ff16e639e0dced2334527bf32f 308 Gene3D G3DSA:3.40.50.150 107 277 9.4E-46 T 13-10-2018 P40_12835 e440f4ff16e639e0dced2334527bf32f 308 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 7 301 50.342 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 P40_12835 e440f4ff16e639e0dced2334527bf32f 308 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 14 296 2.1E-122 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 P40_09655 df0c4b30603a9ef6e11d17de78ab3984 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 315 331 6.7E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_09655 df0c4b30603a9ef6e11d17de78ab3984 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 315 6.7E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_09655 df0c4b30603a9ef6e11d17de78ab3984 345 SMART SM00342 249 331 3.5E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_09655 df0c4b30603a9ef6e11d17de78ab3984 345 Pfam PF12833 Helix-turn-helix domain 258 331 5.7E-15 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_09655 df0c4b30603a9ef6e11d17de78ab3984 345 SUPERFAMILY SSF46689 284 332 2.87E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_09655 df0c4b30603a9ef6e11d17de78ab3984 345 Gene3D G3DSA:1.10.10.60 229 338 1.3E-22 T 13-10-2018 P40_09655 df0c4b30603a9ef6e11d17de78ab3984 345 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 205 7.8E-31 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_14840 96a6bd979c9855afc645c85397a2daa3 333 Pfam PF09588 YqaJ-like viral recombinase domain 27 170 1.2E-33 T 13-10-2018 IPR019080 YqaJ viral recombinase P40_14840 96a6bd979c9855afc645c85397a2daa3 333 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 21 179 1.1E-39 T 13-10-2018 IPR017482 Putative phage-type endonuclease P40_14840 96a6bd979c9855afc645c85397a2daa3 333 Gene3D G3DSA:3.90.320.10 24 218 1.8E-38 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal P40_14840 96a6bd979c9855afc645c85397a2daa3 333 SUPERFAMILY SSF52980 26 216 6.97E-33 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 P40_17070 f195ea33d5677a76e1b086837a38d8c0 293 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 4 283 32.839 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 P40_17070 f195ea33d5677a76e1b086837a38d8c0 293 SUPERFAMILY SSF54211 6 156 4.33E-43 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_17070 f195ea33d5677a76e1b086837a38d8c0 293 Gene3D G3DSA:3.30.70.890 159 282 1.4E-28 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily P40_17070 f195ea33d5677a76e1b086837a38d8c0 293 Pfam PF00288 GHMP kinases N terminal domain 86 142 6.0E-8 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 P40_17070 f195ea33d5677a76e1b086837a38d8c0 293 SUPERFAMILY SSF55060 159 279 8.63E-30 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily P40_17070 f195ea33d5677a76e1b086837a38d8c0 293 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 281 1.6E-79 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 P40_17070 f195ea33d5677a76e1b086837a38d8c0 293 PIRSF PIRSF010376 2 282 3.5E-85 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 P40_17070 f195ea33d5677a76e1b086837a38d8c0 293 Gene3D G3DSA:3.30.230.10 1 158 7.0E-57 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P40_17070 f195ea33d5677a76e1b086837a38d8c0 293 Pfam PF08544 GHMP kinases C terminal 206 262 2.7E-7 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain P40_00815 ee0a1fcb400d271cabd6821b6bff2590 87 Gene3D G3DSA:3.90.940.10 1 82 4.9E-25 T 13-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 P40_00815 ee0a1fcb400d271cabd6821b6bff2590 87 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.307 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_00815 ee0a1fcb400d271cabd6821b6bff2590 87 Pfam PF01192 RNA polymerase Rpb6 8 59 1.0E-16 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 P40_00815 ee0a1fcb400d271cabd6821b6bff2590 87 SMART SM01409 8 61 3.2E-15 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 P40_00815 ee0a1fcb400d271cabd6821b6bff2590 87 SUPERFAMILY SSF63562 2 67 3.49E-24 T 13-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 P40_00815 ee0a1fcb400d271cabd6821b6bff2590 87 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 2 59 3.2E-22 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_11685 12d4ecbe30a04782534b1024925ff45f 376 SUPERFAMILY SSF53756 6 361 1.12E-65 T 13-10-2018 P40_11685 12d4ecbe30a04782534b1024925ff45f 376 Gene3D G3DSA:3.40.50.2000 182 360 1.8E-33 T 13-10-2018 P40_11685 12d4ecbe30a04782534b1024925ff45f 376 Pfam PF13439 Glycosyltransferase Family 4 15 174 1.4E-19 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 P40_11685 12d4ecbe30a04782534b1024925ff45f 376 Pfam PF13692 Glycosyl transferases group 1 198 324 1.2E-17 T 13-10-2018 P40_11685 12d4ecbe30a04782534b1024925ff45f 376 Gene3D G3DSA:3.40.50.2000 3 181 2.6E-13 T 13-10-2018 P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 Pfam PF13662 Toprim domain 264 328 4.0E-17 T 13-10-2018 IPR006171 TOPRIM domain P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 SUPERFAMILY SSF56731 117 426 8.24E-103 T 13-10-2018 P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 Pfam PF01807 CHC2 zinc finger 6 101 1.7E-40 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 SMART SM00493 263 334 7.8E-20 T 13-10-2018 IPR006171 TOPRIM domain P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 Pfam PF10410 DnaB-helicase binding domain of primase 374 426 1.2E-9 T 13-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 SUPERFAMILY SSF57783 4 101 1.28E-38 T 13-10-2018 P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 Gene3D G3DSA:1.20.50.20 372 426 1.0E-9 T 13-10-2018 P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 Gene3D G3DSA:3.90.980.10 112 244 2.9E-41 T 13-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 Gene3D G3DSA:3.40.1360.10 245 371 6.2E-41 T 13-10-2018 P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 SUPERFAMILY SSF117023 508 613 1.16E-6 T 13-10-2018 P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 Gene3D G3DSA:3.90.580.10 1 102 9.6E-40 T 13-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 Pfam PF08275 DNA primase catalytic core, N-terminal domain 128 254 1.8E-37 T 13-10-2018 IPR013264 DNA primase, catalytic core, N-terminal P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 Hamap MF_00974 DNA primase [dnaG]. 4 626 28.447 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 TIGRFAM TIGR01391 dnaG: DNA primase 5 420 3.2E-139 T 13-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 P40_04585 c624fe4622bf946e6fcbc6b3e6006da0 639 SMART SM00400 36 90 1.1E-37 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 P40_20315 53ca3c12ecdc5c8b04e27606dbbf7ec2 241 Gene3D G3DSA:3.40.50.720 2 241 3.2E-54 T 13-10-2018 P40_20315 53ca3c12ecdc5c8b04e27606dbbf7ec2 241 SUPERFAMILY SSF51735 5 230 2.39E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_20315 53ca3c12ecdc5c8b04e27606dbbf7ec2 241 Pfam PF00106 short chain dehydrogenase 6 193 2.9E-33 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20315 53ca3c12ecdc5c8b04e27606dbbf7ec2 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.9E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20315 53ca3c12ecdc5c8b04e27606dbbf7ec2 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.9E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20315 53ca3c12ecdc5c8b04e27606dbbf7ec2 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.9E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20315 53ca3c12ecdc5c8b04e27606dbbf7ec2 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 4.9E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20500 d7cd9eec781fa2617d1b626f46c91628 275 SUPERFAMILY SSF52096 10 272 1.61E-67 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_20500 d7cd9eec781fa2617d1b626f46c91628 275 Gene3D G3DSA:3.90.226.10 3 213 3.2E-66 T 13-10-2018 P40_20500 d7cd9eec781fa2617d1b626f46c91628 275 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 272 1.4E-38 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_20500 d7cd9eec781fa2617d1b626f46c91628 275 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 114 134 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 P40_20500 d7cd9eec781fa2617d1b626f46c91628 275 Gene3D G3DSA:1.10.12.10 214 273 7.0E-21 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_12690 74896dcbeb76c415263ef51574919f1f 637 SUPERFAMILY SSF46626 9 214 1.55E-17 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_12690 74896dcbeb76c415263ef51574919f1f 637 Gene3D G3DSA:1.10.760.10 85 221 1.6E-16 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_12690 74896dcbeb76c415263ef51574919f1f 637 Pfam PF03239 Iron permease FTR1 family 354 492 6.7E-17 T 13-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 P40_12690 74896dcbeb76c415263ef51574919f1f 637 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 128 211 7.2E-11 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_09890 0dbf894a2c7a7e5f7757f017584cb3cb 394 SUPERFAMILY SSF56645 16 238 1.31E-55 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_09890 0dbf894a2c7a7e5f7757f017584cb3cb 394 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 226 1.3E-20 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_09890 0dbf894a2c7a7e5f7757f017584cb3cb 394 Gene3D G3DSA:1.10.540.10 11 126 4.0E-21 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_09890 0dbf894a2c7a7e5f7757f017584cb3cb 394 Gene3D G3DSA:2.40.110.10 128 243 6.7E-30 T 13-10-2018 P40_09890 0dbf894a2c7a7e5f7757f017584cb3cb 394 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 387 9.0E-36 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_09890 0dbf894a2c7a7e5f7757f017584cb3cb 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 124 2.7E-18 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_09890 0dbf894a2c7a7e5f7757f017584cb3cb 394 Gene3D G3DSA:1.20.140.10 244 391 5.2E-42 T 13-10-2018 P40_09890 0dbf894a2c7a7e5f7757f017584cb3cb 394 SUPERFAMILY SSF47203 239 392 2.26E-44 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_06935 954d2f74ff35d31bf041c2d7575296b1 236 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 50 214 1.7E-30 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 P40_06935 954d2f74ff35d31bf041c2d7575296b1 236 SUPERFAMILY SSF52402 24 204 8.37E-41 T 13-10-2018 P40_06935 954d2f74ff35d31bf041c2d7575296b1 236 Gene3D G3DSA:3.40.50.620 9 236 5.7E-55 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_06935 954d2f74ff35d31bf041c2d7575296b1 236 PIRSF PIRSF000857 8 236 3.1E-60 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 P40_09060 54c6dc217610533ae88e2955293fc008 289 Pfam PF00085 Thioredoxin 8 107 1.0E-26 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 P40_09060 54c6dc217610533ae88e2955293fc008 289 SUPERFAMILY SSF52833 6 114 3.25E-35 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_09060 54c6dc217610533ae88e2955293fc008 289 Gene3D G3DSA:1.25.40.10 117 199 1.9E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_09060 54c6dc217610533ae88e2955293fc008 289 Pfam PF14559 Tetratricopeptide repeat 131 184 8.6E-7 T 13-10-2018 P40_09060 54c6dc217610533ae88e2955293fc008 289 Gene3D G3DSA:3.40.30.10 1 111 4.6E-34 T 13-10-2018 P40_09060 54c6dc217610533ae88e2955293fc008 289 Gene3D G3DSA:1.25.40.10 202 289 1.0E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_09060 54c6dc217610533ae88e2955293fc008 289 Pfam PF14561 Tetratricopeptide repeat 204 289 1.7E-17 T 13-10-2018 P40_05075 56c7324eedb4d6cdcdcae7c79667a068 90 Pfam PF04359 Protein of unknown function (DUF493) 5 90 4.9E-23 T 13-10-2018 IPR007454 Uncharacterised protein family UPF0250 P40_05075 56c7324eedb4d6cdcdcae7c79667a068 90 Gene3D G3DSA:3.30.70.260 2 90 3.1E-21 T 13-10-2018 P40_05075 56c7324eedb4d6cdcdcae7c79667a068 90 SUPERFAMILY SSF117991 5 90 3.66E-18 T 13-10-2018 IPR027471 YbeD-like domain superfamily P40_10660 00b5499177862a284b62b014cabb21f9 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_10660 00b5499177862a284b62b014cabb21f9 143 Pfam PF08334 Type II secretion system (T2SS), protein G 33 137 8.6E-40 T 13-10-2018 IPR013545 Type II secretion system protein G P40_10660 00b5499177862a284b62b014cabb21f9 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 8.2E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_10660 00b5499177862a284b62b014cabb21f9 143 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 1.8E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_10660 00b5499177862a284b62b014cabb21f9 143 Gene3D G3DSA:3.30.700.10 33 138 2.3E-36 T 13-10-2018 P40_10660 00b5499177862a284b62b014cabb21f9 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 1.5E-15 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 P40_10660 00b5499177862a284b62b014cabb21f9 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 1.5E-15 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 P40_10660 00b5499177862a284b62b014cabb21f9 143 SUPERFAMILY SSF54523 37 138 4.66E-33 T 13-10-2018 P40_10660 00b5499177862a284b62b014cabb21f9 143 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 137 1.6E-49 T 13-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 P40_04115 708f7f94a294bf4d0e3ec90b3ac7a75a 247 SUPERFAMILY SSF49354 19 148 6.02E-44 T 13-10-2018 IPR008962 PapD-like superfamily P40_04115 708f7f94a294bf4d0e3ec90b3ac7a75a 247 PRINTS PR00969 Pili chaperone signature 130 145 7.7E-35 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 P40_04115 708f7f94a294bf4d0e3ec90b3ac7a75a 247 PRINTS PR00969 Pili chaperone signature 73 94 7.7E-35 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 P40_04115 708f7f94a294bf4d0e3ec90b3ac7a75a 247 PRINTS PR00969 Pili chaperone signature 102 119 7.7E-35 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 P40_04115 708f7f94a294bf4d0e3ec90b3ac7a75a 247 PRINTS PR00969 Pili chaperone signature 24 33 7.7E-35 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 P40_04115 708f7f94a294bf4d0e3ec90b3ac7a75a 247 PRINTS PR00969 Pili chaperone signature 169 184 7.7E-35 T 13-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 P40_04115 708f7f94a294bf4d0e3ec90b3ac7a75a 247 Gene3D G3DSA:2.60.40.10 151 246 1.0E-23 T 13-10-2018 IPR013783 Immunoglobulin-like fold P40_04115 708f7f94a294bf4d0e3ec90b3ac7a75a 247 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 175 239 2.4E-17 T 13-10-2018 IPR016148 Pili assembly chaperone, C-terminal P40_04115 708f7f94a294bf4d0e3ec90b3ac7a75a 247 Gene3D G3DSA:2.60.40.10 25 149 4.1E-44 T 13-10-2018 IPR013783 Immunoglobulin-like fold P40_04115 708f7f94a294bf4d0e3ec90b3ac7a75a 247 SUPERFAMILY SSF49584 150 240 7.46E-18 T 13-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily P40_04115 708f7f94a294bf4d0e3ec90b3ac7a75a 247 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 148 5.1E-46 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 P40_09505 1bf96f4a8645ff5dd49a47c708faaf53 328 Pfam PF02885 Glycosyl transferase family, helical bundle domain 17 70 3.2E-17 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 P40_09505 1bf96f4a8645ff5dd49a47c708faaf53 328 Gene3D G3DSA:3.40.1030.10 80 326 7.5E-61 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 P40_09505 1bf96f4a8645ff5dd49a47c708faaf53 328 SUPERFAMILY SSF52418 83 324 7.72E-53 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 P40_09505 1bf96f4a8645ff5dd49a47c708faaf53 328 Pfam PF00591 Glycosyl transferase family, a/b domain 103 318 1.6E-10 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 P40_09505 1bf96f4a8645ff5dd49a47c708faaf53 328 Gene3D G3DSA:1.20.970.10 5 73 7.6E-25 T 13-10-2018 P40_09505 1bf96f4a8645ff5dd49a47c708faaf53 328 SUPERFAMILY SSF47648 11 72 1.83E-16 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 P40_17895 77e345645532ff6e6d53a3e0326e8743 143 SUPERFAMILY SSF54523 1 84 8.63E-10 T 13-10-2018 P40_17895 77e345645532ff6e6d53a3e0326e8743 143 Pfam PF12019 Type II transport protein GspH 31 130 2.4E-9 T 13-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 P40_17895 77e345645532ff6e6d53a3e0326e8743 143 Gene3D G3DSA:3.55.40.10 17 143 6.9E-23 T 13-10-2018 P40_01360 ba64346be63a447b34bf389a7fe309fc 440 SUPERFAMILY SSF53092 3 175 2.44E-58 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal P40_01360 ba64346be63a447b34bf389a7fe309fc 440 SMART SM01011 3 137 4.7E-71 T 13-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 P40_01360 ba64346be63a447b34bf389a7fe309fc 440 Pfam PF00557 Metallopeptidase family M24 182 414 1.5E-65 T 13-10-2018 IPR000994 Peptidase M24 P40_01360 ba64346be63a447b34bf389a7fe309fc 440 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 349 361 - T 13-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site P40_01360 ba64346be63a447b34bf389a7fe309fc 440 Pfam PF05195 Aminopeptidase P, N-terminal domain 8 127 6.4E-40 T 13-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 P40_01360 ba64346be63a447b34bf389a7fe309fc 440 Gene3D G3DSA:3.90.230.10 173 440 4.3E-103 T 13-10-2018 P40_01360 ba64346be63a447b34bf389a7fe309fc 440 SUPERFAMILY SSF55920 176 436 1.44E-87 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like P40_01360 ba64346be63a447b34bf389a7fe309fc 440 Gene3D G3DSA:3.40.350.10 3 172 1.8E-59 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal P40_12095 a6af365f8788106a56ee849b26739105 144 Gene3D G3DSA:2.170.150.20 16 144 1.5E-58 T 13-10-2018 P40_12095 a6af365f8788106a56ee849b26739105 144 Pfam PF01641 SelR domain 25 140 1.7E-49 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 P40_12095 a6af365f8788106a56ee849b26739105 144 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 16 142 36.313 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 P40_12095 a6af365f8788106a56ee849b26739105 144 SUPERFAMILY SSF51316 19 141 1.36E-54 T 13-10-2018 IPR011057 Mss4-like superfamily P40_12095 a6af365f8788106a56ee849b26739105 144 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 20 139 2.8E-50 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 P40_09775 beae36f1840cbfb2f83cccdc815f4529 293 Pfam PF10118 Predicted metal-dependent hydrolase 11 257 3.1E-84 T 13-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 P40_09775 beae36f1840cbfb2f83cccdc815f4529 293 PIRSF PIRSF007580 2 275 2.8E-79 T 13-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 P40_02050 d1e308edb56014b021f2b1409db2bc33 207 SUPERFAMILY SSF52833 8 83 6.87E-23 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_02050 d1e308edb56014b021f2b1409db2bc33 207 Gene3D G3DSA:3.40.30.10 2 201 1.5E-66 T 13-10-2018 P40_02050 d1e308edb56014b021f2b1409db2bc33 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 192 3.9E-11 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal P40_02050 d1e308edb56014b021f2b1409db2bc33 207 SUPERFAMILY SSF47616 73 194 9.82E-30 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_02050 d1e308edb56014b021f2b1409db2bc33 207 Pfam PF02798 Glutathione S-transferase, N-terminal domain 9 76 3.6E-15 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_02050 d1e308edb56014b021f2b1409db2bc33 207 Gene3D G3DSA:1.20.1050.10 83 191 1.5E-66 T 13-10-2018 P40_08800 c50e2646fb1168be70ff3b4a238f016d 342 SUPERFAMILY SSF143631 31 334 6.15E-103 T 13-10-2018 IPR003374 ApbE-like superfamily P40_08800 c50e2646fb1168be70ff3b4a238f016d 342 Pfam PF02424 ApbE family 36 313 3.0E-88 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 P40_08800 c50e2646fb1168be70ff3b4a238f016d 342 PIRSF PIRSF006268 1 336 6.2E-98 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 P40_08800 c50e2646fb1168be70ff3b4a238f016d 342 Gene3D G3DSA:3.10.520.20 20 342 5.9E-118 T 13-10-2018 P40_07220 1e8527fe8e3cc27b6da57b1ad929d675 405 SUPERFAMILY SSF53901 1 251 1.18E-63 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_07220 1e8527fe8e3cc27b6da57b1ad929d675 405 Gene3D G3DSA:3.40.47.10 1 252 3.5E-65 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_07220 1e8527fe8e3cc27b6da57b1ad929d675 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 360 1.5E-29 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal P40_07220 1e8527fe8e3cc27b6da57b1ad929d675 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 6.4E-46 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal P40_07220 1e8527fe8e3cc27b6da57b1ad929d675 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site P40_07220 1e8527fe8e3cc27b6da57b1ad929d675 405 SMART SM00825 Beta-ketoacyl synthase 4 405 7.4E-13 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain P40_07220 1e8527fe8e3cc27b6da57b1ad929d675 405 Gene3D G3DSA:3.40.47.10 258 404 1.4E-44 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_07220 1e8527fe8e3cc27b6da57b1ad929d675 405 SUPERFAMILY SSF53901 213 402 3.87E-59 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_09485 d54c4400d0ee4749b295ca4b50562578 443 Gene3D G3DSA:1.10.3710.10 339 440 1.2E-36 T 13-10-2018 P40_09485 d54c4400d0ee4749b295ca4b50562578 443 SMART SM00382 49 165 6.6E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_09485 d54c4400d0ee4749b295ca4b50562578 443 Gene3D G3DSA:3.40.50.300 2 164 1.6E-45 T 13-10-2018 P40_09485 d54c4400d0ee4749b295ca4b50562578 443 Gene3D G3DSA:1.10.8.60 165 235 1.7E-7 T 13-10-2018 P40_09485 d54c4400d0ee4749b295ca4b50562578 443 Pfam PF12002 MgsA AAA+ ATPase C terminal 261 427 6.2E-68 T 13-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal P40_09485 d54c4400d0ee4749b295ca4b50562578 443 Gene3D G3DSA:1.20.272.10 236 338 1.5E-42 T 13-10-2018 P40_09485 d54c4400d0ee4749b295ca4b50562578 443 SUPERFAMILY SSF52540 11 230 7.28E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_09485 d54c4400d0ee4749b295ca4b50562578 443 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 12 144 1.1E-16 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 P40_09485 d54c4400d0ee4749b295ca4b50562578 443 Pfam PF16193 AAA C-terminal domain 186 260 5.6E-22 T 13-10-2018 IPR032423 AAA C-terminal domain P40_09485 d54c4400d0ee4749b295ca4b50562578 443 SUPERFAMILY SSF48019 245 427 1.13E-73 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 P40_00820 9d6558db29e762e95287b4a499b4fe74 210 SMART SM00072 4 186 1.2E-65 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit P40_00820 9d6558db29e762e95287b4a499b4fe74 210 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 183 7.1E-73 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 P40_00820 9d6558db29e762e95287b4a499b4fe74 210 Hamap MF_00328 Guanylate kinase [gmk]. 3 186 35.982 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 P40_00820 9d6558db29e762e95287b4a499b4fe74 210 Pfam PF00625 Guanylate kinase 6 184 1.5E-52 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit P40_00820 9d6558db29e762e95287b4a499b4fe74 210 ProSitePatterns PS00856 Guanylate kinase-like signature. 39 56 - T 13-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 P40_00820 9d6558db29e762e95287b4a499b4fe74 210 Gene3D G3DSA:3.40.50.300 9 182 5.9E-69 T 13-10-2018 P40_00820 9d6558db29e762e95287b4a499b4fe74 210 SUPERFAMILY SSF52540 5 189 3.84E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_00820 9d6558db29e762e95287b4a499b4fe74 210 Gene3D G3DSA:3.30.63.10 36 95 5.9E-69 T 13-10-2018 P40_04875 b29354ed1b4f9f5f78aecc64934b910d 321 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 12 321 5.9E-144 T 13-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 P40_04875 b29354ed1b4f9f5f78aecc64934b910d 321 PIRSF PIRSF029693 9 321 1.0E-135 T 13-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 P40_09150 9061d3a860ac4a4ba64ba97a88301d25 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 256 3.2E-100 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 P40_09150 9061d3a860ac4a4ba64ba97a88301d25 264 Gene3D G3DSA:3.90.230.10 1 263 4.8E-113 T 13-10-2018 P40_09150 9061d3a860ac4a4ba64ba97a88301d25 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 98 114 2.3E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 P40_09150 9061d3a860ac4a4ba64ba97a88301d25 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 75 88 2.3E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 P40_09150 9061d3a860ac4a4ba64ba97a88301d25 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 168 180 2.3E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 P40_09150 9061d3a860ac4a4ba64ba97a88301d25 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 199 211 2.3E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 P40_09150 9061d3a860ac4a4ba64ba97a88301d25 264 SUPERFAMILY SSF55920 4 262 3.79E-91 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like P40_09150 9061d3a860ac4a4ba64ba97a88301d25 264 Pfam PF00557 Metallopeptidase family M24 12 248 7.6E-55 T 13-10-2018 IPR000994 Peptidase M24 P40_09150 9061d3a860ac4a4ba64ba97a88301d25 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 257 42.827 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 P40_09150 9061d3a860ac4a4ba64ba97a88301d25 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 174 192 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 P40_15225 66ef8899b6c48b09f08ce3e705f7bab3 132 SUPERFAMILY SSF52821 14 129 1.44E-25 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_15225 66ef8899b6c48b09f08ce3e705f7bab3 132 SMART SM00450 23 127 9.1E-12 T 13-10-2018 IPR001763 Rhodanese-like domain P40_15225 66ef8899b6c48b09f08ce3e705f7bab3 132 Gene3D G3DSA:3.40.250.10 2 132 6.5E-31 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_15225 66ef8899b6c48b09f08ce3e705f7bab3 132 Pfam PF00581 Rhodanese-like domain 24 123 3.4E-13 T 13-10-2018 IPR001763 Rhodanese-like domain P40_11700 76ab07aff78f874587ff44360cae09a3 322 SUPERFAMILY SSF103481 231 304 3.4E-7 T 13-10-2018 P40_11700 76ab07aff78f874587ff44360cae09a3 322 SUPERFAMILY SSF103481 42 143 1.44E-13 T 13-10-2018 P40_11700 76ab07aff78f874587ff44360cae09a3 322 Pfam PF00892 EamA-like transporter family 9 139 6.7E-15 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_11700 76ab07aff78f874587ff44360cae09a3 322 Pfam PF00892 EamA-like transporter family 149 300 2.8E-8 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_18510 da96478efbe3b5f4ea202086e0635aaf 297 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 267 5.1E-96 T 13-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 P40_18510 da96478efbe3b5f4ea202086e0635aaf 297 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 287 37.764 T 13-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 P40_18510 da96478efbe3b5f4ea202086e0635aaf 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 190 1.8E-11 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P40_18510 da96478efbe3b5f4ea202086e0635aaf 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.8E-11 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P40_18510 da96478efbe3b5f4ea202086e0635aaf 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 166 176 1.8E-11 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P40_18510 da96478efbe3b5f4ea202086e0635aaf 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.8E-11 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P40_18510 da96478efbe3b5f4ea202086e0635aaf 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.8E-11 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P40_18510 da96478efbe3b5f4ea202086e0635aaf 297 Gene3D G3DSA:3.40.50.620 78 214 1.1E-97 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_18510 da96478efbe3b5f4ea202086e0635aaf 297 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 125 228 6.0E-14 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 P40_18510 da96478efbe3b5f4ea202086e0635aaf 297 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 107 1.5E-25 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 P40_18510 da96478efbe3b5f4ea202086e0635aaf 297 Gene3D G3DSA:3.40.50.620 3 280 1.1E-97 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_18510 da96478efbe3b5f4ea202086e0635aaf 297 SUPERFAMILY SSF52374 3 277 8.81E-73 T 13-10-2018 P40_02395 5aaab4b8f9a4d58f700cd2187841a221 145 SUPERFAMILY SSF54637 6 133 1.07E-26 T 13-10-2018 IPR029069 HotDog domain superfamily P40_02395 5aaab4b8f9a4d58f700cd2187841a221 145 Pfam PF03061 Thioesterase superfamily 50 123 2.0E-14 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_02395 5aaab4b8f9a4d58f700cd2187841a221 145 Gene3D G3DSA:3.10.129.10 1 138 3.9E-38 T 13-10-2018 P40_12035 f095e4448751e8147f96b73ac12d03e8 487 Pfam PF00171 Aldehyde dehydrogenase family 21 480 2.1E-168 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_12035 f095e4448751e8147f96b73ac12d03e8 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 285 296 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 P40_12035 f095e4448751e8147f96b73ac12d03e8 487 Gene3D G3DSA:3.40.605.10 26 477 4.1E-180 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_12035 f095e4448751e8147f96b73ac12d03e8 487 Gene3D G3DSA:3.40.309.10 264 454 4.1E-180 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_12035 f095e4448751e8147f96b73ac12d03e8 487 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 32 479 1.5E-198 T 13-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 P40_12035 f095e4448751e8147f96b73ac12d03e8 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 257 264 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 P40_12035 f095e4448751e8147f96b73ac12d03e8 487 SUPERFAMILY SSF53720 7 484 8.51E-171 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_20225 0dc35f4d8dec5bbf7a3d8ad3ed0c18cf 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.2E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20225 0dc35f4d8dec5bbf7a3d8ad3ed0c18cf 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.2E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20225 0dc35f4d8dec5bbf7a3d8ad3ed0c18cf 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.2E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20225 0dc35f4d8dec5bbf7a3d8ad3ed0c18cf 251 SUPERFAMILY SSF51735 5 231 9.53E-61 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_20225 0dc35f4d8dec5bbf7a3d8ad3ed0c18cf 251 Gene3D G3DSA:3.40.50.720 6 251 2.1E-67 T 13-10-2018 P40_20225 0dc35f4d8dec5bbf7a3d8ad3ed0c18cf 251 Pfam PF00106 short chain dehydrogenase 6 199 5.6E-50 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20225 0dc35f4d8dec5bbf7a3d8ad3ed0c18cf 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_20225 0dc35f4d8dec5bbf7a3d8ad3ed0c18cf 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 7.6E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20225 0dc35f4d8dec5bbf7a3d8ad3ed0c18cf 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 7.6E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20225 0dc35f4d8dec5bbf7a3d8ad3ed0c18cf 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 7.6E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20225 0dc35f4d8dec5bbf7a3d8ad3ed0c18cf 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.6E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_17220 4beb63cdf2206f75e82fbdc3a5a7ef03 323 Gene3D G3DSA:3.40.50.720 39 312 4.0E-90 T 13-10-2018 P40_17220 4beb63cdf2206f75e82fbdc3a5a7ef03 323 SUPERFAMILY SSF51735 103 284 7.09E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_17220 4beb63cdf2206f75e82fbdc3a5a7ef03 323 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 225 239 3.0E-5 T 13-10-2018 P40_17220 4beb63cdf2206f75e82fbdc3a5a7ef03 323 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 3.0E-5 T 13-10-2018 P40_17220 4beb63cdf2206f75e82fbdc3a5a7ef03 323 Gene3D G3DSA:3.40.50.720 102 289 4.0E-90 T 13-10-2018 P40_17220 4beb63cdf2206f75e82fbdc3a5a7ef03 323 SUPERFAMILY SSF52283 24 134 4.68E-8 T 13-10-2018 P40_17220 4beb63cdf2206f75e82fbdc3a5a7ef03 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 283 1.1E-52 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 P40_17220 4beb63cdf2206f75e82fbdc3a5a7ef03 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 38 314 3.9E-6 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 P40_17220 4beb63cdf2206f75e82fbdc3a5a7ef03 323 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site P40_14015 1b8c0ed403387398d48d7941ed252bb6 179 Pfam PF14110 Domain of unknown function (DUF4282) 45 125 1.8E-17 T 13-10-2018 IPR025557 Protein of unknown function DUF4282 P40_07640 bac065baf2f91509d8afcca81f3515c1 402 Gene3D G3DSA:1.20.140.10 248 401 1.4E-40 T 13-10-2018 P40_07640 bac065baf2f91509d8afcca81f3515c1 402 Gene3D G3DSA:1.10.540.10 1 131 6.9E-53 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_07640 bac065baf2f91509d8afcca81f3515c1 402 Gene3D G3DSA:2.40.110.10 132 247 2.6E-48 T 13-10-2018 P40_07640 bac065baf2f91509d8afcca81f3515c1 402 SUPERFAMILY SSF56645 1 260 3.27E-67 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_07640 bac065baf2f91509d8afcca81f3515c1 402 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 128 1.7E-15 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_07640 bac065baf2f91509d8afcca81f3515c1 402 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 247 397 6.4E-37 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_07640 bac065baf2f91509d8afcca81f3515c1 402 SUPERFAMILY SSF47203 245 400 3.06E-45 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_07640 bac065baf2f91509d8afcca81f3515c1 402 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 235 1.8E-19 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_16000 fa8a30b482f40f238090a95e6a83526e 449 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 211 431 4.9E-55 T 13-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 P40_16000 fa8a30b482f40f238090a95e6a83526e 449 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 105 3.2E-19 T 13-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 P40_16000 fa8a30b482f40f238090a95e6a83526e 449 Pfam PF07196 Flagellin hook IN motif 134 181 1.9E-9 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 54 250 1.3E-90 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 179 194 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 227 239 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 Pfam PF00813 FliP family 54 246 2.0E-78 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 172 184 4.8E-27 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 50 59 4.8E-27 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 122 136 4.8E-27 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 240 250 4.8E-27 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 162 4.8E-27 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 110 122 4.8E-27 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 52 71 1.1E-67 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 91 110 1.1E-67 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 179 199 1.1E-67 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 224 249 1.1E-67 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 200 221 1.1E-67 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 P40_16080 bde6e9808f47a74a64c81b8114cba6c3 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 71 91 1.1E-67 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 P40_05510 972a904b7652ffe53fdf2630715d5357 651 Gene3D G3DSA:3.30.450.40 23 214 5.9E-44 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_05510 972a904b7652ffe53fdf2630715d5357 651 Gene3D G3DSA:3.40.50.300 327 508 2.2E-61 T 13-10-2018 P40_05510 972a904b7652ffe53fdf2630715d5357 651 SUPERFAMILY SSF55781 70 213 7.06E-9 T 13-10-2018 P40_05510 972a904b7652ffe53fdf2630715d5357 651 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 550 559 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site P40_05510 972a904b7652ffe53fdf2630715d5357 651 Pfam PF01590 GAF domain 70 207 7.4E-6 T 13-10-2018 IPR003018 GAF domain GO:0005515 P40_05510 972a904b7652ffe53fdf2630715d5357 651 Gene3D G3DSA:1.10.8.60 509 587 2.5E-11 T 13-10-2018 P40_05510 972a904b7652ffe53fdf2630715d5357 651 Gene3D G3DSA:1.10.10.60 605 645 3.7E-8 T 13-10-2018 P40_05510 972a904b7652ffe53fdf2630715d5357 651 SUPERFAMILY SSF46689 603 643 5.38E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_05510 972a904b7652ffe53fdf2630715d5357 651 SMART SM00382 357 501 5.8E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_05510 972a904b7652ffe53fdf2630715d5357 651 Pfam PF02954 Bacterial regulatory protein, Fis family 611 641 5.3E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_05510 972a904b7652ffe53fdf2630715d5357 651 Pfam PF00158 Sigma-54 interaction domain 339 504 1.8E-64 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 P40_05510 972a904b7652ffe53fdf2630715d5357 651 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 361 374 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 P40_05510 972a904b7652ffe53fdf2630715d5357 651 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 424 439 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 P40_05510 972a904b7652ffe53fdf2630715d5357 651 SUPERFAMILY SSF52540 341 580 2.01E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_01820 44f797ca1f9308abda03f393fdd00fa2 209 SUPERFAMILY SSF50475 9 192 6.54E-34 T 13-10-2018 P40_01820 44f797ca1f9308abda03f393fdd00fa2 209 PIRSF PIRSF010372 1 208 1.5E-59 T 13-10-2018 IPR007396 Transcriptional regulator PAI 2-type P40_01820 44f797ca1f9308abda03f393fdd00fa2 209 Gene3D G3DSA:2.30.110.10 1 206 3.8E-64 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 P40_01820 44f797ca1f9308abda03f393fdd00fa2 209 Pfam PF04299 Putative FMN-binding domain 2 166 1.6E-52 T 13-10-2018 IPR007396 Transcriptional regulator PAI 2-type P40_21630 0294f558a3e392bcc6eab8ee8de60660 457 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 4 453 2.0E-150 T 13-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 P40_21630 0294f558a3e392bcc6eab8ee8de60660 457 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 4 267 1.1E-72 T 13-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 P40_21630 0294f558a3e392bcc6eab8ee8de60660 457 SUPERFAMILY SSF52777 4 147 1.22E-6 T 13-10-2018 P40_21630 0294f558a3e392bcc6eab8ee8de60660 457 Pfam PF06974 Protein of unknown function (DUF1298) 306 450 4.9E-43 T 13-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 SUPERFAMILY SSF100920 345 506 1.7E-33 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 SUPERFAMILY SSF53067 161 340 1.36E-39 T 13-10-2018 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 Gene3D G3DSA:2.60.34.10 341 519 2.1E-39 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 SUPERFAMILY SSF53067 2 157 2.02E-50 T 13-10-2018 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 Gene3D G3DSA:3.30.420.40 4 336 2.2E-106 T 13-10-2018 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 Gene3D G3DSA:3.30.420.40 159 326 2.2E-106 T 13-10-2018 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 6 13 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 PRINTS PR00301 70kDa heat shock protein signature 436 452 8.8E-39 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 PRINTS PR00301 70kDa heat shock protein signature 2 15 8.8E-39 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 PRINTS PR00301 70kDa heat shock protein signature 113 133 8.8E-39 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 PRINTS PR00301 70kDa heat shock protein signature 293 309 8.8E-39 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 PRINTS PR00301 70kDa heat shock protein signature 30 42 8.8E-39 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 PRINTS PR00301 70kDa heat shock protein signature 172 182 8.8E-39 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 PRINTS PR00301 70kDa heat shock protein signature 349 368 8.8E-39 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 PRINTS PR00301 70kDa heat shock protein signature 324 344 8.8E-39 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 Gene3D G3DSA:3.90.640.10 198 268 2.2E-106 T 13-10-2018 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 Pfam PF00012 Hsp70 protein 78 497 3.3E-108 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_16835 8e16368c6efab1065ba9bdc0cdc9b804 561 Pfam PF00012 Hsp70 protein 3 76 1.3E-17 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P40_12350 8a6ffc2e39495e8822abe1ad18bc5b02 197 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 6.3E-13 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_12350 8a6ffc2e39495e8822abe1ad18bc5b02 197 SUPERFAMILY SSF47616 71 194 1.17E-24 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_12350 8a6ffc2e39495e8822abe1ad18bc5b02 197 Pfam PF13410 Glutathione S-transferase, C-terminal domain 125 184 3.7E-7 T 13-10-2018 P40_12350 8a6ffc2e39495e8822abe1ad18bc5b02 197 Gene3D G3DSA:1.20.1050.10 83 192 4.3E-26 T 13-10-2018 P40_12350 8a6ffc2e39495e8822abe1ad18bc5b02 197 SUPERFAMILY SSF52833 1 83 2.06E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_12350 8a6ffc2e39495e8822abe1ad18bc5b02 197 Gene3D G3DSA:3.40.30.10 1 77 7.2E-20 T 13-10-2018 P40_17800 5db42d5b54380b492de3e0c32b1c49af 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 3.4E-60 T 13-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 P40_17800 5db42d5b54380b492de3e0c32b1c49af 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 1.6E-25 T 13-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 P40_17800 5db42d5b54380b492de3e0c32b1c49af 163 Gene3D G3DSA:3.30.70.1150 83 163 1.0E-27 T 13-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal P40_17800 5db42d5b54380b492de3e0c32b1c49af 163 Gene3D G3DSA:3.30.70.260 1 78 3.2E-33 T 13-10-2018 P40_17800 5db42d5b54380b492de3e0c32b1c49af 163 SUPERFAMILY SSF55021 79 162 6.1E-26 T 13-10-2018 P40_17800 5db42d5b54380b492de3e0c32b1c49af 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 7.0E-31 T 13-10-2018 P40_17800 5db42d5b54380b492de3e0c32b1c49af 163 Pfam PF13710 ACT domain 12 72 8.8E-16 T 13-10-2018 P40_17800 5db42d5b54380b492de3e0c32b1c49af 163 SUPERFAMILY SSF55021 1 75 1.4E-20 T 13-10-2018 P40_15405 2e6492cce05859ffbe73d345655f356c 645 SUPERFAMILY SSF51905 33 416 1.38E-51 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_15405 2e6492cce05859ffbe73d345655f356c 645 SUPERFAMILY SSF52833 446 633 5.81E-53 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_15405 2e6492cce05859ffbe73d345655f356c 645 Gene3D G3DSA:3.40.30.20 422 629 2.3E-57 T 13-10-2018 IPR038220 Phenol hydroxylase, C-terminal TRX-fold domain superfamily P40_15405 2e6492cce05859ffbe73d345655f356c 645 Pfam PF01494 FAD binding domain 33 406 1.6E-74 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 P40_15405 2e6492cce05859ffbe73d345655f356c 645 Gene3D G3DSA:3.50.50.60 34 403 7.9E-125 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_15405 2e6492cce05859ffbe73d345655f356c 645 SUPERFAMILY SSF54373 223 323 1.06E-31 T 13-10-2018 P40_15405 2e6492cce05859ffbe73d345655f356c 645 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 340 355 2.0E-33 T 13-10-2018 P40_15405 2e6492cce05859ffbe73d345655f356c 645 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 199 214 2.0E-33 T 13-10-2018 P40_15405 2e6492cce05859ffbe73d345655f356c 645 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 355 371 2.0E-33 T 13-10-2018 P40_15405 2e6492cce05859ffbe73d345655f356c 645 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 34 56 2.0E-33 T 13-10-2018 P40_15405 2e6492cce05859ffbe73d345655f356c 645 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 373 391 2.0E-33 T 13-10-2018 P40_15405 2e6492cce05859ffbe73d345655f356c 645 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 391 407 2.0E-33 T 13-10-2018 P40_15405 2e6492cce05859ffbe73d345655f356c 645 Pfam PF07976 Phenol hydroxylase, C-terminal dimerisation domain 436 596 4.6E-40 T 13-10-2018 IPR012941 Phenol hydroxylase, C-terminal dimerisation domain P40_15405 2e6492cce05859ffbe73d345655f356c 645 Gene3D G3DSA:3.30.9.50 102 320 7.9E-125 T 13-10-2018 P40_19655 e8b1a8ee4e75b5fead0e3ae1e3e8fa89 488 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 9.3E-173 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 P40_19655 e8b1a8ee4e75b5fead0e3ae1e3e8fa89 488 SUPERFAMILY SSF143968 323 487 3.27E-66 T 13-10-2018 P40_19655 e8b1a8ee4e75b5fead0e3ae1e3e8fa89 488 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 72.326 T 13-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 P40_19655 e8b1a8ee4e75b5fead0e3ae1e3e8fa89 488 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 2.1E-174 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 P40_19655 e8b1a8ee4e75b5fead0e3ae1e3e8fa89 488 Gene3D G3DSA:1.20.5.570 455 488 1.5E-14 T 13-10-2018 P40_19655 e8b1a8ee4e75b5fead0e3ae1e3e8fa89 488 Gene3D G3DSA:3.40.1670.10 337 454 3.6E-51 T 13-10-2018 P40_19655 e8b1a8ee4e75b5fead0e3ae1e3e8fa89 488 SUPERFAMILY SSF50475 3 322 1.14E-127 T 13-10-2018 P40_16470 15bd7fdfb734d5ad4239c2aa038b0825 490 Gene3D G3DSA:3.40.1190.10 101 334 2.0E-73 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 P40_16470 15bd7fdfb734d5ad4239c2aa038b0825 490 Gene3D G3DSA:3.40.1390.10 4 99 9.1E-20 T 13-10-2018 P40_16470 15bd7fdfb734d5ad4239c2aa038b0825 490 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 483 1.1E-148 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 P40_16470 15bd7fdfb734d5ad4239c2aa038b0825 490 Pfam PF08245 Mur ligase middle domain 110 310 4.0E-47 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 P40_16470 15bd7fdfb734d5ad4239c2aa038b0825 490 SUPERFAMILY SSF53623 101 328 1.7E-71 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 P40_16470 15bd7fdfb734d5ad4239c2aa038b0825 490 Gene3D G3DSA:3.90.190.20 340 488 7.8E-56 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 P40_16470 15bd7fdfb734d5ad4239c2aa038b0825 490 Pfam PF02875 Mur ligase family, glutamate ligase domain 331 415 9.7E-24 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 P40_16470 15bd7fdfb734d5ad4239c2aa038b0825 490 Pfam PF01225 Mur ligase family, catalytic domain 25 69 1.3E-8 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 P40_16470 15bd7fdfb734d5ad4239c2aa038b0825 490 SUPERFAMILY SSF53244 331 485 1.22E-49 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 P40_16470 15bd7fdfb734d5ad4239c2aa038b0825 490 SUPERFAMILY SSF63418 15 99 6.93E-18 T 13-10-2018 IPR035911 MurE/MurF, N-terminal P40_16470 15bd7fdfb734d5ad4239c2aa038b0825 490 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 483 33.717 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 P40_01530 795916962593ebc4a3f93ffb9f46c729 767 Pfam PF00593 TonB dependent receptor 301 765 4.8E-48 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_01530 795916962593ebc4a3f93ffb9f46c729 767 SMART SM00965 58 108 1.2E-9 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 P40_01530 795916962593ebc4a3f93ffb9f46c729 767 Gene3D G3DSA:2.40.170.20 238 767 1.6E-116 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_01530 795916962593ebc4a3f93ffb9f46c729 767 Gene3D G3DSA:2.170.130.10 113 236 4.4E-29 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_01530 795916962593ebc4a3f93ffb9f46c729 767 Gene3D G3DSA:3.55.50.30 36 104 1.8E-18 T 13-10-2018 P40_01530 795916962593ebc4a3f93ffb9f46c729 767 SUPERFAMILY SSF56935 112 767 1.69E-118 T 13-10-2018 P40_01530 795916962593ebc4a3f93ffb9f46c729 767 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 132 767 5.0E-105 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 P40_01530 795916962593ebc4a3f93ffb9f46c729 767 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 226 7.7E-14 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_12635 0c88204ba5d2fb0e4bc105eee07c07dd 255 Pfam PF13468 Glyoxalase-like domain 11 181 2.2E-7 T 13-10-2018 IPR025870 Glyoxalase-like domain P40_12635 0c88204ba5d2fb0e4bc105eee07c07dd 255 Gene3D G3DSA:3.10.180.10 1 129 7.5E-14 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_12635 0c88204ba5d2fb0e4bc105eee07c07dd 255 SUPERFAMILY SSF54593 3 239 1.54E-14 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_09375 46ce376e46bd7779fdba550447beb223 228 Gene3D G3DSA:3.40.50.150 18 220 8.6E-36 T 13-10-2018 P40_09375 46ce376e46bd7779fdba550447beb223 228 Pfam PF02390 Putative methyltransferase 55 217 6.1E-17 T 13-10-2018 P40_09375 46ce376e46bd7779fdba550447beb223 228 SUPERFAMILY SSF53335 37 217 7.37E-20 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_02955 757f4a1aaa6313cd1169f3f8ad750f9a 252 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 159 173 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 P40_02955 757f4a1aaa6313cd1169f3f8ad750f9a 252 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 17 251 35.961 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 P40_02955 757f4a1aaa6313cd1169f3f8ad750f9a 252 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 26 251 3.7E-76 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 P40_02955 757f4a1aaa6313cd1169f3f8ad750f9a 252 SUPERFAMILY SSF53335 15 248 1.56E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_02955 757f4a1aaa6313cd1169f3f8ad750f9a 252 Pfam PF01209 ubiE/COQ5 methyltransferase family 21 251 1.2E-88 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 P40_02955 757f4a1aaa6313cd1169f3f8ad750f9a 252 Gene3D G3DSA:3.40.50.150 32 252 4.3E-66 T 13-10-2018 P40_08105 6fac6ad9c17506305bb45dd9e95e4735 498 SMART SM01027 265 403 2.8E-54 T 13-10-2018 IPR022712 Beta-Casp domain P40_08105 6fac6ad9c17506305bb45dd9e95e4735 498 SMART SM00849 33 249 3.1E-10 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_08105 6fac6ad9c17506305bb45dd9e95e4735 498 Gene3D G3DSA:3.40.50.10890 233 431 1.3E-122 T 13-10-2018 P40_08105 6fac6ad9c17506305bb45dd9e95e4735 498 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 418 471 6.8E-10 T 13-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain P40_08105 6fac6ad9c17506305bb45dd9e95e4735 498 Pfam PF00753 Metallo-beta-lactamase superfamily 44 213 2.1E-10 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_08105 6fac6ad9c17506305bb45dd9e95e4735 498 SUPERFAMILY SSF56281 20 476 3.52E-108 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_08105 6fac6ad9c17506305bb45dd9e95e4735 498 Gene3D G3DSA:3.60.15.10 26 461 1.3E-122 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_08105 6fac6ad9c17506305bb45dd9e95e4735 498 Pfam PF10996 Beta-Casp domain 265 403 2.8E-29 T 13-10-2018 IPR022712 Beta-Casp domain P40_04605 79ee74b2c50b8fa4836c04bf5aaff4ed 201 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 13 194 7.3E-60 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 P40_04605 79ee74b2c50b8fa4836c04bf5aaff4ed 201 SMART SM01207 15 190 3.6E-80 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 P40_04605 79ee74b2c50b8fa4836c04bf5aaff4ed 201 Pfam PF02660 Glycerol-3-phosphate acyltransferase 16 189 2.3E-51 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 P40_04605 79ee74b2c50b8fa4836c04bf5aaff4ed 201 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 12 198 19.008 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 P40_16490 8e22d2c47c0e61c9f398a9f4787e4fa2 147 Pfam PF02381 MraZ protein, putative antitoxin-like 2 75 1.5E-12 T 13-10-2018 IPR020603 MraZ domain P40_16490 8e22d2c47c0e61c9f398a9f4787e4fa2 147 Pfam PF02381 MraZ protein, putative antitoxin-like 77 132 4.0E-15 T 13-10-2018 IPR020603 MraZ domain P40_16490 8e22d2c47c0e61c9f398a9f4787e4fa2 147 SUPERFAMILY SSF89447 2 135 8.22E-41 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily P40_16490 8e22d2c47c0e61c9f398a9f4787e4fa2 147 Gene3D G3DSA:2.40.330.20 1 145 2.9E-40 T 13-10-2018 IPR038619 MraZ superfamily P40_16490 8e22d2c47c0e61c9f398a9f4787e4fa2 147 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 144 1.1E-37 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 P40_16490 8e22d2c47c0e61c9f398a9f4787e4fa2 147 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 147 47.217 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 P40_16490 8e22d2c47c0e61c9f398a9f4787e4fa2 147 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 132 3.0E-32 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 P40_13525 f323e5bb5c838f8b05e5dd8384b59f88 726 Gene3D G3DSA:1.10.1040.50 510 717 2.8E-59 T 13-10-2018 P40_13525 f323e5bb5c838f8b05e5dd8384b59f88 726 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 328 506 8.5E-65 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 P40_13525 f323e5bb5c838f8b05e5dd8384b59f88 726 SUPERFAMILY SSF48179 508 649 9.35E-19 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_13525 f323e5bb5c838f8b05e5dd8384b59f88 726 SUPERFAMILY SSF51735 325 507 1.15E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_13525 f323e5bb5c838f8b05e5dd8384b59f88 726 Gene3D G3DSA:3.40.50.720 326 509 7.7E-71 T 13-10-2018 P40_13525 f323e5bb5c838f8b05e5dd8384b59f88 726 Gene3D G3DSA:3.90.226.10 1 325 2.4E-111 T 13-10-2018 P40_13525 f323e5bb5c838f8b05e5dd8384b59f88 726 SUPERFAMILY SSF48179 635 723 1.02E-15 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_13525 f323e5bb5c838f8b05e5dd8384b59f88 726 SUPERFAMILY SSF52096 11 317 2.25E-58 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_13525 f323e5bb5c838f8b05e5dd8384b59f88 726 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 509 609 3.2E-17 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 P40_13525 f323e5bb5c838f8b05e5dd8384b59f88 726 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 213 1.8E-33 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_03350 b9464904372b70238d265a5271a082ec 337 SMART SM01329 5 331 1.0E-181 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 P40_03350 b9464904372b70238d265a5271a082ec 337 Gene3D G3DSA:3.40.718.10 1 337 8.3E-140 T 13-10-2018 P40_03350 b9464904372b70238d265a5271a082ec 337 SUPERFAMILY SSF53659 3 335 5.57E-126 T 13-10-2018 P40_03350 b9464904372b70238d265a5271a082ec 337 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 P40_03350 b9464904372b70238d265a5271a082ec 337 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 331 1.3E-105 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 P40_11635 9ec0a83599bd4dae1135783f72b35329 350 SUPERFAMILY SSF56645 6 145 7.18E-8 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_11635 9ec0a83599bd4dae1135783f72b35329 350 Gene3D G3DSA:1.20.140.10 194 330 2.6E-24 T 13-10-2018 P40_11635 9ec0a83599bd4dae1135783f72b35329 350 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 199 310 4.6E-15 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_11635 9ec0a83599bd4dae1135783f72b35329 350 SUPERFAMILY SSF47203 196 329 4.19E-26 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_11635 9ec0a83599bd4dae1135783f72b35329 350 Gene3D G3DSA:1.10.540.10 1 94 5.3E-5 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_18465 6478fbb6e20b0d612b8a831d75be49b0 162 SMART SM00028 56 89 15.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_18465 6478fbb6e20b0d612b8a831d75be49b0 162 SMART SM00028 128 161 98.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_18465 6478fbb6e20b0d612b8a831d75be49b0 162 SMART SM00028 90 123 57.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_18465 6478fbb6e20b0d612b8a831d75be49b0 162 SUPERFAMILY SSF48452 55 159 5.69E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_18465 6478fbb6e20b0d612b8a831d75be49b0 162 Gene3D G3DSA:1.25.40.10 32 162 6.0E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_18465 6478fbb6e20b0d612b8a831d75be49b0 162 Pfam PF13428 Tetratricopeptide repeat 58 99 1.4E-5 T 13-10-2018 P40_10370 cb4e78befd1741b1926e826befb0baf0 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 24 289 1.8E-35 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_14395 9fe1b440b5cec24bdf9c3a9f1c1706f7 78 Gene3D G3DSA:1.20.120.1930 1 78 1.4E-25 T 13-10-2018 P40_14395 9fe1b440b5cec24bdf9c3a9f1c1706f7 78 Pfam PF16691 Domain of unknown function (DUF5062) 3 77 1.5E-31 T 13-10-2018 IPR032036 Protein of unknown function DUF5062 P40_10705 bb03293eea170c62c58439470e404249 1233 Gene3D G3DSA:1.10.288.10 939 1097 1.4E-141 T 13-10-2018 P40_10705 bb03293eea170c62c58439470e404249 1233 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 941 1213 8.3E-124 T 13-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_10705 bb03293eea170c62c58439470e404249 1233 SUPERFAMILY SSF51717 355 629 1.31E-91 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_10705 bb03293eea170c62c58439470e404249 1233 SUPERFAMILY SSF52242 745 895 2.62E-47 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 P40_10705 bb03293eea170c62c58439470e404249 1233 SMART SM01018 655 738 2.6E-46 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_10705 bb03293eea170c62c58439470e404249 1233 Gene3D G3DSA:3.10.196.10 910 1225 1.4E-141 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_10705 bb03293eea170c62c58439470e404249 1233 Gene3D G3DSA:3.20.20.330 2 339 2.9E-126 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 P40_10705 bb03293eea170c62c58439470e404249 1233 Gene3D G3DSA:3.40.50.280 746 897 1.0E-55 T 13-10-2018 P40_10705 bb03293eea170c62c58439470e404249 1233 Gene3D G3DSA:3.20.20.20 340 641 9.4E-134 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_10705 bb03293eea170c62c58439470e404249 1233 PIRSF PIRSF000381 2 1200 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_10705 bb03293eea170c62c58439470e404249 1233 Gene3D G3DSA:1.10.1240.10 647 735 1.2E-40 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_10705 bb03293eea170c62c58439470e404249 1233 Pfam PF02607 B12 binding domain 657 730 3.5E-25 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_10705 bb03293eea170c62c58439470e404249 1233 Pfam PF02574 Homocysteine S-methyltransferase 18 324 1.7E-81 T 13-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 P40_10705 bb03293eea170c62c58439470e404249 1233 SUPERFAMILY SSF47644 650 737 1.03E-28 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_10705 bb03293eea170c62c58439470e404249 1233 SUPERFAMILY SSF82282 9 398 2.35E-117 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 P40_10705 bb03293eea170c62c58439470e404249 1233 SUPERFAMILY SSF56507 904 1230 5.62E-130 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_10705 bb03293eea170c62c58439470e404249 1233 Pfam PF00809 Pterin binding enzyme 359 597 1.0E-60 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_10705 bb03293eea170c62c58439470e404249 1233 TIGRFAM TIGR02082 metH: methionine synthase 13 1195 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_10705 bb03293eea170c62c58439470e404249 1233 Pfam PF02310 B12 binding domain 750 840 3.7E-19 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 P40_10125 b7282c580bee84cc0b6656f680f7ffbd 141 Pfam PF07511 Protein of unknown function (DUF1525) 27 138 7.7E-34 T 13-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 P40_10125 b7282c580bee84cc0b6656f680f7ffbd 141 SUPERFAMILY SSF52833 66 137 8.34E-5 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_10125 b7282c580bee84cc0b6656f680f7ffbd 141 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 27 137 3.4E-35 T 13-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 P40_09370 92f561f62595128329ee92d05a9caf93 311 Gene3D G3DSA:2.20.110.10 236 309 1.3E-6 T 13-10-2018 P40_09370 92f561f62595128329ee92d05a9caf93 311 Pfam PF07661 MORN repeat variant 116 134 0.0019 T 13-10-2018 IPR011652 MORN variant P40_09370 92f561f62595128329ee92d05a9caf93 311 Pfam PF07661 MORN repeat variant 93 112 0.17 T 13-10-2018 IPR011652 MORN variant P40_09370 92f561f62595128329ee92d05a9caf93 311 SUPERFAMILY SSF82185 223 304 2.09E-10 T 13-10-2018 P40_09370 92f561f62595128329ee92d05a9caf93 311 Gene3D G3DSA:3.90.930.1 83 193 2.1E-14 T 13-10-2018 P40_09370 92f561f62595128329ee92d05a9caf93 311 SUPERFAMILY SSF82185 48 152 1.96E-16 T 13-10-2018 P40_11010 ba47d826490afb9a37a96186724dac6a 164 Pfam PF05751 FixH 21 157 8.8E-26 T 13-10-2018 IPR008620 Nitrogen fixation protein FixH P40_14520 e3894074f28acde02901fe61288cc6cc 319 Pfam PF04055 Radical SAM superfamily 30 165 7.9E-11 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P40_14520 e3894074f28acde02901fe61288cc6cc 319 SUPERFAMILY SSF102114 15 315 1.57E-39 T 13-10-2018 P40_14520 e3894074f28acde02901fe61288cc6cc 319 Gene3D G3DSA:3.20.20.70 18 290 1.7E-19 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_14520 e3894074f28acde02901fe61288cc6cc 319 Pfam PF12345 Protein of unknown function (DUF3641) 182 317 1.1E-54 T 13-10-2018 IPR024521 Domain of unknown function DUF3641 P40_14520 e3894074f28acde02901fe61288cc6cc 319 TIGRFAM TIGR04167 rSAM_SeCys: radical SAM/Cys-rich domain protein 18 318 8.0E-136 T 13-10-2018 IPR026351 Radical SAM/Cys-rich domain protein P40_21695 7e002afdad78eb3e7c5da4764770ef69 130 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 17 105 1.1E-17 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 P40_21695 7e002afdad78eb3e7c5da4764770ef69 130 Pfam PF00825 Ribonuclease P 17 122 4.3E-20 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 P40_21695 7e002afdad78eb3e7c5da4764770ef69 130 Gene3D G3DSA:3.30.230.10 12 129 2.0E-28 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P40_21695 7e002afdad78eb3e7c5da4764770ef69 130 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 17 130 15.841 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 P40_21695 7e002afdad78eb3e7c5da4764770ef69 130 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 29 102 2.0E-12 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 P40_21695 7e002afdad78eb3e7c5da4764770ef69 130 SUPERFAMILY SSF54211 17 122 1.09E-20 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_18940 25a1ae5fd8a8f2b53c7e594fe9f6343b 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 79 2.2E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_18940 25a1ae5fd8a8f2b53c7e594fe9f6343b 242 SUPERFAMILY SSF46785 13 83 3.96E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_18940 25a1ae5fd8a8f2b53c7e594fe9f6343b 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 8.8E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_18940 25a1ae5fd8a8f2b53c7e594fe9f6343b 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 8.8E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_18940 25a1ae5fd8a8f2b53c7e594fe9f6343b 242 Pfam PF07729 FCD domain 89 211 1.3E-21 T 13-10-2018 IPR011711 GntR, C-terminal P40_18940 25a1ae5fd8a8f2b53c7e594fe9f6343b 242 Gene3D G3DSA:1.10.10.10 4 79 5.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_18940 25a1ae5fd8a8f2b53c7e594fe9f6343b 242 Gene3D G3DSA:1.20.120.530 85 226 1.2E-21 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_18940 25a1ae5fd8a8f2b53c7e594fe9f6343b 242 SUPERFAMILY SSF48008 87 220 4.18E-20 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_18940 25a1ae5fd8a8f2b53c7e594fe9f6343b 242 SMART SM00895 89 213 1.2E-13 T 13-10-2018 IPR011711 GntR, C-terminal P40_18940 25a1ae5fd8a8f2b53c7e594fe9f6343b 242 SMART SM00345 21 79 1.8E-19 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_14740 e75c212bbc5f9b7aa44a020ba8b3476d 273 SUPERFAMILY SSF53098 99 263 4.81E-43 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_14740 e75c212bbc5f9b7aa44a020ba8b3476d 273 Gene3D G3DSA:3.30.420.10 104 246 2.8E-21 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_14740 e75c212bbc5f9b7aa44a020ba8b3476d 273 Pfam PF13276 HTH-like domain 40 90 8.3E-7 T 13-10-2018 IPR025948 HTH-like domain P40_14740 e75c212bbc5f9b7aa44a020ba8b3476d 273 Pfam PF13683 Integrase core domain 189 255 5.9E-27 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 P40_20385 f60fbcae225b760cdf5f78df946d5645 344 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 296 337 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 P40_20385 f60fbcae225b760cdf5f78df946d5645 344 SUPERFAMILY SSF46689 295 341 2.55E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_20385 f60fbcae225b760cdf5f78df946d5645 344 Gene3D G3DSA:1.10.10.60 241 343 2.4E-21 T 13-10-2018 P40_20385 f60fbcae225b760cdf5f78df946d5645 344 Pfam PF12833 Helix-turn-helix domain 266 341 8.9E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_20385 f60fbcae225b760cdf5f78df946d5645 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 310 325 1.7E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_20385 f60fbcae225b760cdf5f78df946d5645 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 325 341 1.7E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_20385 f60fbcae225b760cdf5f78df946d5645 344 SMART SM00342 260 341 6.7E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_20385 f60fbcae225b760cdf5f78df946d5645 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 34 216 2.1E-39 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_12965 eaf41f08152b8b39f016d41ea8099015 405 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 174 403 2.8E-82 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 P40_12965 eaf41f08152b8b39f016d41ea8099015 405 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 404 5.2E-183 T 13-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 P40_12965 eaf41f08152b8b39f016d41ea8099015 405 SUPERFAMILY SSF52777 175 404 6.23E-91 T 13-10-2018 P40_12965 eaf41f08152b8b39f016d41ea8099015 405 Pfam PF00364 Biotin-requiring enzyme 4 75 1.5E-18 T 13-10-2018 IPR000089 Biotin/lipoyl attachment P40_12965 eaf41f08152b8b39f016d41ea8099015 405 Gene3D G3DSA:3.30.559.10 173 405 7.7E-97 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 P40_12965 eaf41f08152b8b39f016d41ea8099015 405 SUPERFAMILY SSF51230 1 95 3.93E-24 T 13-10-2018 IPR011053 Single hybrid motif P40_12965 eaf41f08152b8b39f016d41ea8099015 405 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 P40_12965 eaf41f08152b8b39f016d41ea8099015 405 Gene3D G3DSA:4.10.320.10 105 158 4.8E-16 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 P40_12965 eaf41f08152b8b39f016d41ea8099015 405 Gene3D G3DSA:2.40.50.100 1 103 1.8E-21 T 13-10-2018 P40_12965 eaf41f08152b8b39f016d41ea8099015 405 Pfam PF02817 e3 binding domain 112 145 5.4E-13 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 P40_12965 eaf41f08152b8b39f016d41ea8099015 405 SUPERFAMILY SSF47005 105 149 2.09E-11 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 P40_11400 77752b5c84d2456ba462d5e9b8c71b0b 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 159 340 2.2E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_11400 77752b5c84d2456ba462d5e9b8c71b0b 343 SUPERFAMILY SSF161098 136 323 1.19E-17 T 13-10-2018 IPR035906 MetI-like superfamily P40_11400 77752b5c84d2456ba462d5e9b8c71b0b 343 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 8 50 2.0E-7 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain P40_11400 77752b5c84d2456ba462d5e9b8c71b0b 343 Gene3D G3DSA:1.10.3720.10 129 340 9.7E-15 T 13-10-2018 IPR035906 MetI-like superfamily P40_12210 03e926ea714b8042ca62d50fc87e7e75 317 SUPERFAMILY SSF54060 23 232 4.24E-77 T 13-10-2018 P40_12210 03e926ea714b8042ca62d50fc87e7e75 317 SUPERFAMILY SSF57884 270 317 8.63E-8 T 13-10-2018 IPR035451 Ada-like domain superfamily P40_12210 03e926ea714b8042ca62d50fc87e7e75 317 Pfam PF04231 Endonuclease I 27 231 6.2E-45 T 13-10-2018 IPR007346 Endonuclease I GO:0004518 P40_07015 555e4cf33c592b2a15b834161facd5f2 241 SUPERFAMILY SSF52540 37 209 1.02E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07015 555e4cf33c592b2a15b834161facd5f2 241 Pfam PF06414 Zeta toxin 32 218 7.1E-38 T 13-10-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 P40_07015 555e4cf33c592b2a15b834161facd5f2 241 Gene3D G3DSA:3.40.50.300 12 224 2.4E-31 T 13-10-2018 P40_12465 fb6825df17afc0cc47875dcf9220bb93 97 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 8 94 3.7E-36 T 13-10-2018 IPR014057 Uncharacterized protein HI1420 P40_12465 fb6825df17afc0cc47875dcf9220bb93 97 SUPERFAMILY SSF47413 33 92 1.64E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_20565 81df4b1a15e000bac23409a8965545c3 163 Gene3D G3DSA:3.30.70.920 60 143 1.3E-24 T 13-10-2018 P40_20565 81df4b1a15e000bac23409a8965545c3 163 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site P40_20565 81df4b1a15e000bac23409a8965545c3 163 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 5.1E-19 T 13-10-2018 P40_20565 81df4b1a15e000bac23409a8965545c3 163 SUPERFAMILY SSF54909 66 153 1.74E-20 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_20565 81df4b1a15e000bac23409a8965545c3 163 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 2.4E-21 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain P40_20565 81df4b1a15e000bac23409a8965545c3 163 SUPERFAMILY SSF46785 5 65 6.16E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_20565 81df4b1a15e000bac23409a8965545c3 163 SMART SM00344 6 115 9.7E-43 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 P40_20565 81df4b1a15e000bac23409a8965545c3 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.8E-18 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 P40_20565 81df4b1a15e000bac23409a8965545c3 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.8E-18 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 P40_20565 81df4b1a15e000bac23409a8965545c3 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.8E-18 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 P40_20565 81df4b1a15e000bac23409a8965545c3 163 Gene3D G3DSA:1.10.10.10 1 59 4.8E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_00165 7ebdf60a16358d069800dec61a17c2c8 252 SMART SM00342 151 235 5.9E-9 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_00165 7ebdf60a16358d069800dec61a17c2c8 252 Gene3D G3DSA:1.10.10.60 148 236 7.4E-18 T 13-10-2018 P40_00165 7ebdf60a16358d069800dec61a17c2c8 252 Pfam PF12833 Helix-turn-helix domain 158 233 6.9E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_19690 040399331be1238e60e602cf2ef7a75c 391 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 10 138 8.4E-16 T 13-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 P40_19690 040399331be1238e60e602cf2ef7a75c 391 Gene3D G3DSA:3.40.50.720 8 169 1.1E-38 T 13-10-2018 P40_19690 040399331be1238e60e602cf2ef7a75c 391 SUPERFAMILY SSF51735 10 161 1.55E-16 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_19165 efde4ec3c89a623681363a66651365a6 156 Pfam PF03358 NADPH-dependent FMN reductase 49 119 1.9E-5 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 P40_19165 efde4ec3c89a623681363a66651365a6 156 Gene3D G3DSA:3.40.50.360 3 152 2.5E-14 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_19165 efde4ec3c89a623681363a66651365a6 156 SUPERFAMILY SSF52218 6 148 5.43E-25 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_14750 b5bfbb2ed868e6a4398f830a31f1f18b 81 Pfam PF11431 Membrane transport protein MerF 24 66 1.8E-12 T 13-10-2018 IPR021091 Mercury ion transport, MerF P40_14750 b5bfbb2ed868e6a4398f830a31f1f18b 81 Gene3D G3DSA:1.20.58.2000 1 79 3.3E-24 T 13-10-2018 P40_07135 3afbbee7cc1d3fce97b025f4151bc2fb 302 SUPERFAMILY SSF54814 182 297 3.4E-39 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 P40_07135 3afbbee7cc1d3fce97b025f4151bc2fb 302 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 279 2.1E-93 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_07135 3afbbee7cc1d3fce97b025f4151bc2fb 302 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 59 74 1.6E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_07135 3afbbee7cc1d3fce97b025f4151bc2fb 302 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 10 30 1.6E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_07135 3afbbee7cc1d3fce97b025f4151bc2fb 302 SUPERFAMILY SSF52540 10 205 3.4E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07135 3afbbee7cc1d3fce97b025f4151bc2fb 302 Gene3D G3DSA:3.40.50.300 2 184 1.7E-50 T 13-10-2018 P40_07135 3afbbee7cc1d3fce97b025f4151bc2fb 302 Gene3D G3DSA:3.30.300.20 186 298 3.1E-40 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta P40_07135 3afbbee7cc1d3fce97b025f4151bc2fb 302 Pfam PF07650 KH domain 209 284 1.1E-16 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_07135 3afbbee7cc1d3fce97b025f4151bc2fb 302 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 164 1.3E-29 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P40_07135 3afbbee7cc1d3fce97b025f4151bc2fb 302 Pfam PF01926 50S ribosome-binding GTPase 10 125 1.8E-26 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_07135 3afbbee7cc1d3fce97b025f4151bc2fb 302 Hamap MF_00367 GTPase Era [era]. 5 296 35.85 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_20815 f237cade6b44decbb74fe94b07d366ed 105 PRINTS PR00606 Class ID cytochrome C signature 93 103 9.7E-26 T 13-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 P40_20815 f237cade6b44decbb74fe94b07d366ed 105 PRINTS PR00606 Class ID cytochrome C signature 82 92 9.7E-26 T 13-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 P40_20815 f237cade6b44decbb74fe94b07d366ed 105 PRINTS PR00606 Class ID cytochrome C signature 67 80 9.7E-26 T 13-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 P40_20815 f237cade6b44decbb74fe94b07d366ed 105 PRINTS PR00606 Class ID cytochrome C signature 29 42 9.7E-26 T 13-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 P40_20815 f237cade6b44decbb74fe94b07d366ed 105 PRINTS PR00606 Class ID cytochrome C signature 44 57 9.7E-26 T 13-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 P40_20815 f237cade6b44decbb74fe94b07d366ed 105 Gene3D G3DSA:1.10.760.10 24 105 3.9E-33 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_20815 f237cade6b44decbb74fe94b07d366ed 105 SUPERFAMILY SSF46626 27 104 6.84E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_20815 f237cade6b44decbb74fe94b07d366ed 105 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 22 101 1.2E-8 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_00345 83cb79d3ef8d187e9c59758226e48334 122 SMART SM00448 2 115 1.1E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_00345 83cb79d3ef8d187e9c59758226e48334 122 Gene3D G3DSA:3.40.50.12740 1 122 1.3E-43 T 13-10-2018 P40_00345 83cb79d3ef8d187e9c59758226e48334 122 Pfam PF00072 Response regulator receiver domain 4 115 4.7E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_00345 83cb79d3ef8d187e9c59758226e48334 122 SUPERFAMILY SSF52172 1 119 6.97E-39 T 13-10-2018 IPR011006 CheY-like superfamily P40_06175 8375d08f80ab155ec8d64cd11e7bf167 357 SUPERFAMILY SSF56235 29 334 1.39E-100 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P40_06175 8375d08f80ab155ec8d64cd11e7bf167 357 Gene3D G3DSA:3.60.60.10 29 357 1.7E-129 T 13-10-2018 P40_06175 8375d08f80ab155ec8d64cd11e7bf167 357 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 29 315 5.6E-47 T 13-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal P40_16720 a33416ed600ed0435389a01600bce706 404 Gene3D G3DSA:3.10.400.10 4 191 1.2E-63 T 13-10-2018 P40_16720 a33416ed600ed0435389a01600bce706 404 SUPERFAMILY SSF88697 5 169 1.99E-53 T 13-10-2018 IPR015947 PUA-like superfamily P40_16720 a33416ed600ed0435389a01600bce706 404 Gene3D G3DSA:3.40.50.620 192 391 7.4E-76 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_16720 a33416ed600ed0435389a01600bce706 404 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 7 382 4.3E-122 T 13-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 P40_16720 a33416ed600ed0435389a01600bce706 404 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 29 387 45.613 T 13-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 P40_16720 a33416ed600ed0435389a01600bce706 404 Pfam PF14306 PUA-like domain 5 163 7.2E-59 T 13-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 P40_16720 a33416ed600ed0435389a01600bce706 404 Pfam PF01747 ATP-sulfurylase 174 384 2.5E-86 T 13-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 P40_16720 a33416ed600ed0435389a01600bce706 404 SUPERFAMILY SSF52374 174 385 1.3E-82 T 13-10-2018 P40_01135 8753e2c5a353c0cac23b70fb328ac168 67 Gene3D G3DSA:3.10.20.30 4 67 1.1E-22 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_01135 8753e2c5a353c0cac23b70fb328ac168 67 Pfam PF02597 ThiS family 7 67 1.9E-15 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 P40_01135 8753e2c5a353c0cac23b70fb328ac168 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 67 2.0E-20 T 13-10-2018 IPR010035 ThiS, thiamine-biosynthesis P40_01135 8753e2c5a353c0cac23b70fb328ac168 67 SUPERFAMILY SSF54285 5 66 6.11E-19 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp P40_04320 498ae07566fac03af24cdee2fe7b9299 483 Gene3D G3DSA:3.50.50.60 307 481 3.8E-40 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_04320 498ae07566fac03af24cdee2fe7b9299 483 SUPERFAMILY SSF51905 7 395 5.77E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_04320 498ae07566fac03af24cdee2fe7b9299 483 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 8 232 6.7E-18 T 13-10-2018 P40_04320 498ae07566fac03af24cdee2fe7b9299 483 Gene3D G3DSA:3.50.50.60 2 166 1.6E-57 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_04320 498ae07566fac03af24cdee2fe7b9299 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.0E-5 T 13-10-2018 P40_04320 498ae07566fac03af24cdee2fe7b9299 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 4.0E-5 T 13-10-2018 P40_04320 498ae07566fac03af24cdee2fe7b9299 483 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 131 140 4.0E-5 T 13-10-2018 P40_07745 ec05aceb3fa6136fa76e4258d8e1c68e 506 Gene3D G3DSA:3.40.605.10 35 491 5.3E-164 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_07745 ec05aceb3fa6136fa76e4258d8e1c68e 506 Gene3D G3DSA:3.40.309.10 265 463 5.3E-164 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_07745 ec05aceb3fa6136fa76e4258d8e1c68e 506 SUPERFAMILY SSF53720 13 497 9.42E-161 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_07745 ec05aceb3fa6136fa76e4258d8e1c68e 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 P40_07745 ec05aceb3fa6136fa76e4258d8e1c68e 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 P40_07745 ec05aceb3fa6136fa76e4258d8e1c68e 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 3.6E-164 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_00985 74124898fad78b712d707e91c945b9e6 290 Pfam PF00482 Type II secretion system (T2SS), protein F 149 276 4.0E-14 T 13-10-2018 IPR018076 Type II secretion system F domain P40_21530 e9993e56c7503f535e73c94a67815cd4 461 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 321 352 8.2E-4 T 13-10-2018 IPR001451 Hexapeptide repeat P40_21530 e9993e56c7503f535e73c94a67815cd4 461 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 399 432 4.7E-8 T 13-10-2018 IPR001451 Hexapeptide repeat P40_21530 e9993e56c7503f535e73c94a67815cd4 461 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 287 319 1.6E-4 T 13-10-2018 IPR001451 Hexapeptide repeat P40_21530 e9993e56c7503f535e73c94a67815cd4 461 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 10 458 4.5E-194 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 P40_21530 e9993e56c7503f535e73c94a67815cd4 461 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 8 455 42.961 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 P40_21530 e9993e56c7503f535e73c94a67815cd4 461 Pfam PF12804 MobA-like NTP transferase domain 11 128 2.4E-24 T 13-10-2018 IPR025877 MobA-like NTP transferase P40_21530 e9993e56c7503f535e73c94a67815cd4 461 Gene3D G3DSA:3.90.550.10 5 230 2.5E-66 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_21530 e9993e56c7503f535e73c94a67815cd4 461 SUPERFAMILY SSF51161 257 441 2.19E-49 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily P40_21530 e9993e56c7503f535e73c94a67815cd4 461 Gene3D G3DSA:2.160.10.10 231 459 3.7E-68 T 13-10-2018 P40_21530 e9993e56c7503f535e73c94a67815cd4 461 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 406 434 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 P40_21530 e9993e56c7503f535e73c94a67815cd4 461 SUPERFAMILY SSF53448 7 255 7.32E-65 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_10885 ac72de4f9c4af631fe6db55f6b3a6c40 282 SUPERFAMILY SSF103481 43 144 2.35E-16 T 13-10-2018 P40_10885 ac72de4f9c4af631fe6db55f6b3a6c40 282 Pfam PF00892 EamA-like transporter family 8 140 1.3E-15 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_10885 ac72de4f9c4af631fe6db55f6b3a6c40 282 Pfam PF00892 EamA-like transporter family 152 273 1.2E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_10885 ac72de4f9c4af631fe6db55f6b3a6c40 282 SUPERFAMILY SSF103481 183 278 2.09E-13 T 13-10-2018 P40_07000 2db528c671704a8348a8f24286302584 198 Pfam PF01909 Nucleotidyltransferase domain 107 170 4.6E-6 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 P40_07000 2db528c671704a8348a8f24286302584 198 Gene3D G3DSA:1.10.10.10 2 87 5.1E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_07000 2db528c671704a8348a8f24286302584 198 SUPERFAMILY SSF81301 94 186 1.6E-13 T 13-10-2018 P40_07000 2db528c671704a8348a8f24286302584 198 SUPERFAMILY SSF46785 5 92 6.2E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_07000 2db528c671704a8348a8f24286302584 198 Gene3D G3DSA:3.30.460.10 88 180 2.1E-13 T 13-10-2018 P40_14265 37b14bafefd0aa02f299e80a6d2dde42 258 Gene3D G3DSA:1.10.4030.30 88 230 4.0E-25 T 13-10-2018 P40_14265 37b14bafefd0aa02f299e80a6d2dde42 258 SUPERFAMILY SSF54534 103 210 1.11E-22 T 13-10-2018 P40_14265 37b14bafefd0aa02f299e80a6d2dde42 258 SUPERFAMILY SSF109998 13 124 8.63E-9 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily P40_14265 37b14bafefd0aa02f299e80a6d2dde42 258 Pfam PF00639 PPIC-type PPIASE domain 113 206 2.3E-18 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 P40_14265 37b14bafefd0aa02f299e80a6d2dde42 258 Gene3D G3DSA:3.10.50.40 107 209 4.0E-25 T 13-10-2018 P40_16745 72cd56e4e61125d4da6d032c021b7909 352 SUPERFAMILY SSF53383 5 352 2.5E-74 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_16745 72cd56e4e61125d4da6d032c021b7909 352 Pfam PF00155 Aminotransferase class I and II 25 348 2.4E-52 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_16745 72cd56e4e61125d4da6d032c021b7909 352 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 P40_16745 72cd56e4e61125d4da6d032c021b7909 352 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 350 4.8E-88 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 P40_16745 72cd56e4e61125d4da6d032c021b7909 352 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 352 54.539 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 P40_16745 72cd56e4e61125d4da6d032c021b7909 352 Gene3D G3DSA:3.90.1150.10 20 342 1.1E-102 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_16745 72cd56e4e61125d4da6d032c021b7909 352 Gene3D G3DSA:3.40.640.10 38 259 1.1E-102 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_16605 76c7df30cc4036692f21dd4a21b87578 410 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 7.0E-6 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_16605 76c7df30cc4036692f21dd4a21b87578 410 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 7.0E-6 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_16605 76c7df30cc4036692f21dd4a21b87578 410 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 7.0E-6 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_16605 76c7df30cc4036692f21dd4a21b87578 410 Gene3D G3DSA:3.40.50.2300 25 363 2.8E-117 T 13-10-2018 P40_16605 76c7df30cc4036692f21dd4a21b87578 410 Gene3D G3DSA:3.40.50.2300 152 404 2.8E-117 T 13-10-2018 P40_16605 76c7df30cc4036692f21dd4a21b87578 410 Pfam PF13458 Periplasmic binding protein 25 373 4.9E-58 T 13-10-2018 IPR028081 Leucine-binding protein domain P40_16605 76c7df30cc4036692f21dd4a21b87578 410 SUPERFAMILY SSF53822 24 374 1.24E-56 T 13-10-2018 IPR028082 Periplasmic binding protein-like I P40_12855 65261a9a47ecae27a4f417a294f42b83 262 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 189 0.0017 T 13-10-2018 P40_12855 65261a9a47ecae27a4f417a294f42b83 262 Gene3D G3DSA:3.40.50.720 4 261 5.2E-60 T 13-10-2018 P40_12855 65261a9a47ecae27a4f417a294f42b83 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.3E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12855 65261a9a47ecae27a4f417a294f42b83 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.3E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12855 65261a9a47ecae27a4f417a294f42b83 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.3E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12855 65261a9a47ecae27a4f417a294f42b83 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.3E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12855 65261a9a47ecae27a4f417a294f42b83 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.3E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12855 65261a9a47ecae27a4f417a294f42b83 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.4E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12855 65261a9a47ecae27a4f417a294f42b83 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.4E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12855 65261a9a47ecae27a4f417a294f42b83 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.4E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12855 65261a9a47ecae27a4f417a294f42b83 262 Pfam PF00106 short chain dehydrogenase 7 193 7.9E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_12855 65261a9a47ecae27a4f417a294f42b83 262 SUPERFAMILY SSF51735 2 258 2.5E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_07230 d22b77206820d7ccae7fb272718d3f43 651 Pfam PF01578 Cytochrome C assembly protein 89 296 4.5E-54 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 6.2E-51 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 6.2E-51 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 6.2E-51 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 6.2E-51 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 630 643 6.2E-51 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 6.2E-51 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 6.2E-51 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 640 1.9E-223 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 637 1.6E-118 T 13-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.8E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.8E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.8E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.8E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.8E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.8E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.8E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07230 d22b77206820d7ccae7fb272718d3f43 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.8E-93 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_05230 13f764a7a4329cbc2267032af4125133 445 SMART SM00729 147 367 4.0E-59 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 P40_05230 13f764a7a4329cbc2267032af4125133 445 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 438 1.1E-182 T 13-10-2018 P40_05230 13f764a7a4329cbc2267032af4125133 445 Pfam PF01938 TRAM domain 378 439 7.4E-16 T 13-10-2018 IPR002792 TRAM domain P40_05230 13f764a7a4329cbc2267032af4125133 445 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 438 7.9E-146 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 P40_05230 13f764a7a4329cbc2267032af4125133 445 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 P40_05230 13f764a7a4329cbc2267032af4125133 445 Gene3D G3DSA:3.80.30.20 145 379 1.2E-79 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe P40_05230 13f764a7a4329cbc2267032af4125133 445 SUPERFAMILY SSF102114 128 372 1.07E-59 T 13-10-2018 P40_05230 13f764a7a4329cbc2267032af4125133 445 Pfam PF04055 Radical SAM superfamily 151 325 9.2E-28 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P40_05230 13f764a7a4329cbc2267032af4125133 445 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 3.5E-29 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 P40_05230 13f764a7a4329cbc2267032af4125133 445 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 441 71.188 T 13-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 P40_05230 13f764a7a4329cbc2267032af4125133 445 Gene3D G3DSA:3.40.50.12160 3 136 4.7E-33 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily P40_21535 de5a666b090f39de9dc8542a2f3cfc51 141 Gene3D G3DSA:2.60.15.10 3 90 1.7E-33 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21535 de5a666b090f39de9dc8542a2f3cfc51 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 86 2.0E-26 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21535 de5a666b090f39de9dc8542a2f3cfc51 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 2.0E-44 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21535 de5a666b090f39de9dc8542a2f3cfc51 141 Gene3D G3DSA:1.20.5.440 91 133 2.9E-11 T 13-10-2018 P40_21535 de5a666b090f39de9dc8542a2f3cfc51 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 5.9E-10 T 13-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain P40_21535 de5a666b090f39de9dc8542a2f3cfc51 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 22.124 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21535 de5a666b090f39de9dc8542a2f3cfc51 141 SUPERFAMILY SSF51344 3 86 2.35E-27 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21535 de5a666b090f39de9dc8542a2f3cfc51 141 SUPERFAMILY SSF46604 88 137 2.48E-10 T 13-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21535 de5a666b090f39de9dc8542a2f3cfc51 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 5.0E-33 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21685 021cdbffe9c7f08def90fe328e0c98e9 458 Gene3D G3DSA:1.20.120.430 124 458 4.1E-99 T 13-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 P40_21685 021cdbffe9c7f08def90fe328e0c98e9 458 SUPERFAMILY SSF52540 75 376 3.13E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_21685 021cdbffe9c7f08def90fe328e0c98e9 458 Gene3D G3DSA:3.40.50.300 219 386 4.1E-99 T 13-10-2018 P40_21685 021cdbffe9c7f08def90fe328e0c98e9 458 SUPERFAMILY SSF116878 123 458 3.14E-49 T 13-10-2018 P40_21685 021cdbffe9c7f08def90fe328e0c98e9 458 Pfam PF12631 MnmE helical domain 125 455 3.8E-59 T 13-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 P40_21685 021cdbffe9c7f08def90fe328e0c98e9 458 Pfam PF10396 GTP-binding protein TrmE N-terminus 8 122 2.8E-37 T 13-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 P40_21685 021cdbffe9c7f08def90fe328e0c98e9 458 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 346 4.5E-20 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P40_21685 021cdbffe9c7f08def90fe328e0c98e9 458 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 7 458 32.925 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 P40_21685 021cdbffe9c7f08def90fe328e0c98e9 458 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 13 458 2.7E-101 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 P40_21685 021cdbffe9c7f08def90fe328e0c98e9 458 Gene3D G3DSA:3.30.1360.120 1 123 1.1E-42 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 P40_21685 021cdbffe9c7f08def90fe328e0c98e9 458 Pfam PF01926 50S ribosome-binding GTPase 221 341 3.4E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_12205 5fa6c3adcf19e205bf0067b9a1a67c65 125 Gene3D G3DSA:1.10.760.10 5 116 6.0E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_12205 5fa6c3adcf19e205bf0067b9a1a67c65 125 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 15 107 9.2E-14 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_12205 5fa6c3adcf19e205bf0067b9a1a67c65 125 SUPERFAMILY SSF46626 6 117 2.64E-23 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_18490 e8ac28b1685f75657ece2c6483f27905 240 Pfam PF03749 Sugar fermentation stimulation protein 13 229 3.8E-67 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein P40_18490 e8ac28b1685f75657ece2c6483f27905 240 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 2 227 1.1E-56 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein P40_18490 e8ac28b1685f75657ece2c6483f27905 240 Gene3D G3DSA:2.40.50.580 1 82 1.3E-26 T 13-10-2018 P40_18490 e8ac28b1685f75657ece2c6483f27905 240 Gene3D G3DSA:3.40.1350.60 83 240 9.5E-45 T 13-10-2018 P40_18490 e8ac28b1685f75657ece2c6483f27905 240 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 240 52.648 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein P40_15100 c0c68d2e0958dbfb2655c96f245ed764 147 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 11 134 1.3E-47 T 13-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 P40_15100 c0c68d2e0958dbfb2655c96f245ed764 147 Gene3D G3DSA:3.10.129.10 2 139 5.2E-40 T 13-10-2018 P40_15100 c0c68d2e0958dbfb2655c96f245ed764 147 SUPERFAMILY SSF54637 10 137 5.61E-38 T 13-10-2018 IPR029069 HotDog domain superfamily P40_15100 c0c68d2e0958dbfb2655c96f245ed764 147 PIRSF PIRSF003230 2 142 2.2E-43 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 P40_15100 c0c68d2e0958dbfb2655c96f245ed764 147 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 14 128 4.8E-31 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 P40_15100 c0c68d2e0958dbfb2655c96f245ed764 147 Pfam PF03061 Thioesterase superfamily 25 109 1.2E-16 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_06135 e923c63cc9a0a07d0862e7fb68575b71 209 Gene3D G3DSA:3.40.50.720 1 208 2.5E-45 T 13-10-2018 P40_06135 e923c63cc9a0a07d0862e7fb68575b71 209 Pfam PF13460 NAD(P)H-binding 7 185 1.6E-36 T 13-10-2018 IPR016040 NAD(P)-binding domain P40_06135 e923c63cc9a0a07d0862e7fb68575b71 209 SUPERFAMILY SSF51735 1 199 2.67E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.5E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 4.5E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 PIRSF PIRSF006485 1 443 1.4E-169 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 179 346 1.2E-21 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 158 7.5E-17 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 Gene3D G3DSA:3.40.50.300 1 160 2.4E-43 T 13-10-2018 P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 Gene3D G3DSA:3.30.300.20 355 437 7.9E-19 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 Pfam PF01926 50S ribosome-binding GTPase 181 299 8.0E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 Pfam PF01926 50S ribosome-binding GTPase 5 119 9.4E-26 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 SUPERFAMILY SSF52540 4 167 2.31E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 SUPERFAMILY SSF52540 138 441 4.01E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 355 435 3.3E-23 T 13-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 Hamap MF_00195 GTPase Der [der]. 2 438 38.794 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 435 1.5E-172 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 P40_05730 9c3c24a7992fd814cf19a3869a3c10e0 465 Gene3D G3DSA:3.40.50.300 176 350 4.5E-49 T 13-10-2018 P40_12020 e406bd6f211b231fe01168ca61d54ab5 398 SUPERFAMILY SSF53850 34 337 2.5E-25 T 13-10-2018 P40_12020 e406bd6f211b231fe01168ca61d54ab5 398 Gene3D G3DSA:3.40.190.10 40 335 9.4E-29 T 13-10-2018 P40_12020 e406bd6f211b231fe01168ca61d54ab5 398 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 13 335 3.2E-29 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_12020 e406bd6f211b231fe01168ca61d54ab5 398 Gene3D G3DSA:3.40.190.10 124 269 9.4E-29 T 13-10-2018 P40_12020 e406bd6f211b231fe01168ca61d54ab5 398 Pfam PF16868 NMT1-like family 40 335 9.9E-18 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_20705 4077ce40ea90d6caf13872d36fd1edb1 324 Pfam PF12833 Helix-turn-helix domain 244 320 2.6E-15 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_20705 4077ce40ea90d6caf13872d36fd1edb1 324 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 288 303 5.1E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_20705 4077ce40ea90d6caf13872d36fd1edb1 324 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 319 5.1E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_20705 4077ce40ea90d6caf13872d36fd1edb1 324 Gene3D G3DSA:1.10.10.60 221 323 2.7E-18 T 13-10-2018 P40_20705 4077ce40ea90d6caf13872d36fd1edb1 324 SMART SM00342 238 319 2.1E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_20705 4077ce40ea90d6caf13872d36fd1edb1 324 SUPERFAMILY SSF46689 276 321 1.05E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_20705 4077ce40ea90d6caf13872d36fd1edb1 324 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 35 198 2.8E-34 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_01800 461f5a7a5b197554e4f97a24a7ed1d19 356 SUPERFAMILY SSF58104 17 89 9.94E-17 T 13-10-2018 P40_01800 461f5a7a5b197554e4f97a24a7ed1d19 356 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 20 88 8.5E-14 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_01800 461f5a7a5b197554e4f97a24a7ed1d19 356 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 52 81 4.9E-9 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_01800 461f5a7a5b197554e4f97a24a7ed1d19 356 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 23 50 4.9E-9 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_01800 461f5a7a5b197554e4f97a24a7ed1d19 356 Gene3D G3DSA:3.30.450.20 145 244 2.7E-10 T 13-10-2018 P40_01800 461f5a7a5b197554e4f97a24a7ed1d19 356 Gene3D G3DSA:1.10.287.950 2 111 3.5E-16 T 13-10-2018 P40_01800 461f5a7a5b197554e4f97a24a7ed1d19 356 SUPERFAMILY SSF103190 144 248 9.16E-5 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily P40_01800 461f5a7a5b197554e4f97a24a7ed1d19 356 Pfam PF02743 Cache domain 126 320 3.3E-12 T 13-10-2018 IPR033479 Double Cache domain 1 P40_10090 d19215ac825085657c5eadd3bd5a0bbe 498 Pfam PF07916 TraG-like protein, N-terminal region 16 477 1.1E-61 T 13-10-2018 IPR012931 TraG-like, N-terminal P40_17975 fb4fdc72bc03ace4a2dc3728e3c8b175 137 PIRSF PIRSF000714 3 121 1.3E-43 T 13-10-2018 IPR026026 Histidine triad hydrolase, Hint-type P40_17975 fb4fdc72bc03ace4a2dc3728e3c8b175 137 Pfam PF01230 HIT domain 13 99 5.7E-13 T 13-10-2018 IPR001310 Histidine triad (HIT) protein P40_17975 fb4fdc72bc03ace4a2dc3728e3c8b175 137 SUPERFAMILY SSF54197 12 117 2.38E-29 T 13-10-2018 IPR036265 HIT-like superfamily P40_17975 fb4fdc72bc03ace4a2dc3728e3c8b175 137 Gene3D G3DSA:3.30.428.10 3 122 9.5E-34 T 13-10-2018 IPR036265 HIT-like superfamily P40_06265 f13e757672cdc2da5da7074ae1123007 148 Gene3D G3DSA:3.40.630.30 8 142 1.2E-14 T 13-10-2018 P40_06265 f13e757672cdc2da5da7074ae1123007 148 SUPERFAMILY SSF55729 14 135 4.71E-17 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_06265 f13e757672cdc2da5da7074ae1123007 148 Pfam PF00583 Acetyltransferase (GNAT) family 28 132 5.7E-11 T 13-10-2018 IPR000182 GNAT domain P40_07450 b409b266f8e039692c6e8a63ae2f10af 257 Pfam PF01061 ABC-2 type transporter 10 219 8.0E-36 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 P40_07450 b409b266f8e039692c6e8a63ae2f10af 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 59 81 9.0E-6 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 P40_07450 b409b266f8e039692c6e8a63ae2f10af 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 9.0E-6 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 P40_07450 b409b266f8e039692c6e8a63ae2f10af 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 9.0E-6 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 P40_07450 b409b266f8e039692c6e8a63ae2f10af 257 PIRSF PIRSF006648 2 254 5.9E-25 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 P40_04135 118abfb477d8e7126a5813a4b27261ee 778 SMART SM00387 664 774 1.9E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_04135 118abfb477d8e7126a5813a4b27261ee 778 SUPERFAMILY SSF47384 549 619 8.83E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_04135 118abfb477d8e7126a5813a4b27261ee 778 SMART SM01080 36 327 7.2E-75 T 13-10-2018 IPR007890 CHASE2 P40_04135 118abfb477d8e7126a5813a4b27261ee 778 SMART SM00388 555 619 0.0015 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_04135 118abfb477d8e7126a5813a4b27261ee 778 Pfam PF05226 CHASE2 domain 24 328 1.7E-51 T 13-10-2018 IPR007890 CHASE2 P40_04135 118abfb477d8e7126a5813a4b27261ee 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 664 772 2.8E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_04135 118abfb477d8e7126a5813a4b27261ee 778 Gene3D G3DSA:1.10.287.130 546 621 2.1E-5 T 13-10-2018 P40_04135 118abfb477d8e7126a5813a4b27261ee 778 SUPERFAMILY SSF55874 609 772 7.07E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_04135 118abfb477d8e7126a5813a4b27261ee 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 701 715 4.7E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_04135 118abfb477d8e7126a5813a4b27261ee 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 758 771 4.7E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_04135 118abfb477d8e7126a5813a4b27261ee 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 734 752 4.7E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_04135 118abfb477d8e7126a5813a4b27261ee 778 PIRSF PIRSF037347 4 777 1.3E-171 T 13-10-2018 IPR017181 Signal transduction histidine kinase, CHASE2 sensor domain-containing, predicted P40_04135 118abfb477d8e7126a5813a4b27261ee 778 Gene3D G3DSA:3.30.565.10 632 776 2.8E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_00665 d3fc586c740eb5337d83749af72cd28f 182 Pfam PF01300 Telomere recombination 11 179 9.7E-46 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 P40_00665 d3fc586c740eb5337d83749af72cd28f 182 SUPERFAMILY SSF55821 5 181 6.1E-54 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily P40_00665 d3fc586c740eb5337d83749af72cd28f 182 Gene3D G3DSA:3.90.870.10 2 181 5.4E-57 T 13-10-2018 P40_00665 d3fc586c740eb5337d83749af72cd28f 182 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 179 7.2E-43 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 P40_00665 d3fc586c740eb5337d83749af72cd28f 182 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 2 181 35.734 T 13-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 P40_13225 cc831b5f01c7595458614fff8c0850de 325 SUPERFAMILY SSF52096 49 271 1.49E-43 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_13225 cc831b5f01c7595458614fff8c0850de 325 Pfam PF01343 Peptidase family S49 136 276 1.9E-36 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 P40_13225 cc831b5f01c7595458614fff8c0850de 325 Gene3D G3DSA:3.90.226.10 73 272 1.5E-65 T 13-10-2018 P40_13225 cc831b5f01c7595458614fff8c0850de 325 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 71 272 6.3E-48 T 13-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 P40_13225 cc831b5f01c7595458614fff8c0850de 325 Gene3D G3DSA:3.40.1750.20 174 242 1.5E-65 T 13-10-2018 P40_01320 21be06b3dee48e2293adabebe2e841a6 217 Gene3D G3DSA:3.40.50.1360 7 209 1.7E-76 T 13-10-2018 P40_01320 21be06b3dee48e2293adabebe2e841a6 217 Gene3D G3DSA:3.30.70.260 125 195 1.7E-76 T 13-10-2018 P40_01320 21be06b3dee48e2293adabebe2e841a6 217 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.199 T 13-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 P40_01320 21be06b3dee48e2293adabebe2e841a6 217 SUPERFAMILY SSF100950 1 146 5.11E-45 T 13-10-2018 IPR037171 NagB/RpiA transferase-like P40_01320 21be06b3dee48e2293adabebe2e841a6 217 SUPERFAMILY SSF75445 127 198 5.89E-24 T 13-10-2018 P40_01320 21be06b3dee48e2293adabebe2e841a6 217 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 212 2.4E-59 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 P40_01320 21be06b3dee48e2293adabebe2e841a6 217 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 213 1.7E-66 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 P40_19780 1f14675a5fac2afeda2bb90517021b52 310 Pfam PF16220 Domain of unknown function (DUF4880) 11 53 2.4E-11 T 13-10-2018 IPR032623 FecR, N-terminal P40_19780 1f14675a5fac2afeda2bb90517021b52 310 PIRSF PIRSF018266 1 310 7.6E-80 T 13-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component P40_19780 1f14675a5fac2afeda2bb90517021b52 310 Gene3D G3DSA:2.60.120.1440 103 231 2.6E-25 T 13-10-2018 P40_19780 1f14675a5fac2afeda2bb90517021b52 310 Pfam PF16344 Domain of unknown function (DUF4974) 211 298 7.6E-8 T 13-10-2018 IPR032508 Protein FecR, C-terminal P40_19780 1f14675a5fac2afeda2bb90517021b52 310 Pfam PF04773 FecR protein 109 200 5.3E-22 T 13-10-2018 IPR006860 FecR protein P40_18075 7c2f5c46707e2acf7c6005ba4738ac70 172 Hamap MF_00984 Single-stranded DNA-binding protein. 5 113 39.315 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 P40_18075 7c2f5c46707e2acf7c6005ba4738ac70 172 Gene3D G3DSA:2.40.50.140 1 117 2.3E-49 T 13-10-2018 P40_18075 7c2f5c46707e2acf7c6005ba4738ac70 172 SUPERFAMILY SSF50249 3 172 8.23E-61 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_18075 7c2f5c46707e2acf7c6005ba4738ac70 172 Pfam PF00436 Single-strand binding protein family 5 109 1.5E-41 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 P40_18075 7c2f5c46707e2acf7c6005ba4738ac70 172 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 172 2.7E-58 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 P40_13395 933bf4dcaf84f163098ee74333604b04 318 Pfam PF00756 Putative esterase 62 270 1.3E-15 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 P40_13395 933bf4dcaf84f163098ee74333604b04 318 Gene3D G3DSA:3.40.50.1820 37 311 1.7E-65 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_13395 933bf4dcaf84f163098ee74333604b04 318 SUPERFAMILY SSF53474 40 308 2.35E-51 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_18455 bd4669db7c1db265445c11dc244eabbc 429 Pfam PF00202 Aminotransferase class-III 34 398 1.4E-80 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_18455 bd4669db7c1db265445c11dc244eabbc 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 107.524 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 P40_18455 bd4669db7c1db265445c11dc244eabbc 429 Gene3D G3DSA:3.90.1150.10 8 420 1.9E-185 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_18455 bd4669db7c1db265445c11dc244eabbc 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_18455 bd4669db7c1db265445c11dc244eabbc 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 9.9E-197 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 P40_18455 bd4669db7c1db265445c11dc244eabbc 429 SUPERFAMILY SSF53383 2 426 1.09E-138 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_18455 bd4669db7c1db265445c11dc244eabbc 429 Gene3D G3DSA:3.40.640.10 71 319 1.9E-185 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_11640 ec75b584da5c450de0f204c0708e79a4 264 Gene3D G3DSA:3.90.226.10 1 202 3.7E-67 T 13-10-2018 P40_11640 ec75b584da5c450de0f204c0708e79a4 264 SUPERFAMILY SSF52096 2 261 2.31E-82 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_11640 ec75b584da5c450de0f204c0708e79a4 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 260 9.4E-61 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_11640 ec75b584da5c450de0f204c0708e79a4 264 Gene3D G3DSA:1.10.12.10 205 261 2.0E-14 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_21405 6c8e877cee471c356786779932b81fdf 327 SUPERFAMILY SSF55961 113 311 2.25E-13 T 13-10-2018 P40_21405 6c8e877cee471c356786779932b81fdf 327 SUPERFAMILY SSF50022 10 123 1.31E-31 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_21405 6c8e877cee471c356786779932b81fdf 327 Gene3D G3DSA:3.30.530.90 143 325 5.0E-29 T 13-10-2018 P40_21405 6c8e877cee471c356786779932b81fdf 327 Gene3D G3DSA:2.102.10.10 9 142 1.4E-39 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_21405 6c8e877cee471c356786779932b81fdf 327 Pfam PF00355 Rieske [2Fe-2S] domain 14 95 9.6E-19 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 P40_12515 d0d240c628c8a2c32d51a9095d5045af 311 SMART SM00849 35 219 6.2E-19 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_12515 d0d240c628c8a2c32d51a9095d5045af 311 Gene3D G3DSA:3.60.15.10 25 252 8.5E-30 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_12515 d0d240c628c8a2c32d51a9095d5045af 311 SUPERFAMILY SSF56281 33 297 3.92E-34 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_12515 d0d240c628c8a2c32d51a9095d5045af 311 Pfam PF00753 Metallo-beta-lactamase superfamily 73 191 1.9E-5 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_07410 eec9bce96e684060e466a1d90c9beef5 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 192 2.5E-5 T 13-10-2018 P40_07410 eec9bce96e684060e466a1d90c9beef5 253 SUPERFAMILY SSF51735 14 252 1.53E-68 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_07410 eec9bce96e684060e466a1d90c9beef5 253 Gene3D G3DSA:3.40.50.720 3 253 1.1E-67 T 13-10-2018 P40_07410 eec9bce96e684060e466a1d90c9beef5 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 252 1.7E-55 T 13-10-2018 P40_07410 eec9bce96e684060e466a1d90c9beef5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.4E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07410 eec9bce96e684060e466a1d90c9beef5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 1.4E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07410 eec9bce96e684060e466a1d90c9beef5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.4E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07410 eec9bce96e684060e466a1d90c9beef5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.4E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07410 eec9bce96e684060e466a1d90c9beef5 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.4E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15770 98d9a48185039d663b1e49ecbc302ccf 110 SUPERFAMILY SSF103481 5 106 1.12E-23 T 13-10-2018 P40_15770 98d9a48185039d663b1e49ecbc302ccf 110 Pfam PF00893 Small Multidrug Resistance protein 5 94 1.6E-30 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 P40_15770 98d9a48185039d663b1e49ecbc302ccf 110 Gene3D G3DSA:1.10.3730.20 1 110 7.8E-40 T 13-10-2018 P40_01950 4184cbab51a75aa9ac10b1cc6231b78c 105 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 63 5.2E-8 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain P40_01950 4184cbab51a75aa9ac10b1cc6231b78c 105 SUPERFAMILY SSF54909 3 74 3.19E-11 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_01950 4184cbab51a75aa9ac10b1cc6231b78c 105 Gene3D G3DSA:3.30.70.100 4 90 1.5E-9 T 13-10-2018 P40_15120 2264f98c2f9fbe35aadf38cd5a338e3c 244 Pfam PF01709 Transcriptional regulator 5 238 3.7E-95 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_15120 2264f98c2f9fbe35aadf38cd5a338e3c 244 SUPERFAMILY SSF75625 3 242 2.49E-93 T 13-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_15120 2264f98c2f9fbe35aadf38cd5a338e3c 244 Gene3D G3DSA:1.10.10.200 1 81 2.3E-35 T 13-10-2018 IPR017856 Integrase-like, N-terminal P40_15120 2264f98c2f9fbe35aadf38cd5a338e3c 244 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 35.57 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_15120 2264f98c2f9fbe35aadf38cd5a338e3c 244 Gene3D G3DSA:3.30.70.980 85 237 7.6E-54 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_15120 2264f98c2f9fbe35aadf38cd5a338e3c 244 Gene3D G3DSA:3.30.70.980 130 206 7.6E-54 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_15120 2264f98c2f9fbe35aadf38cd5a338e3c 244 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 239 1.1E-98 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04865 b57add46bccb532464171656b67b4806 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 13-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 P40_04865 b57add46bccb532464171656b67b4806 150 PIRSF PIRSF001399 1 146 2.8E-57 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 P40_04865 b57add46bccb532464171656b67b4806 150 Gene3D G3DSA:3.40.50.9100 1 149 9.3E-64 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 P40_04865 b57add46bccb532464171656b67b4806 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 144 7.0E-63 T 13-10-2018 P40_04865 b57add46bccb532464171656b67b4806 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 142 1.6E-59 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 P40_04865 b57add46bccb532464171656b67b4806 150 Pfam PF01220 Dehydroquinase class II 4 140 3.2E-59 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 P40_04865 b57add46bccb532464171656b67b4806 150 SUPERFAMILY SSF52304 3 146 6.54E-61 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 P40_04865 b57add46bccb532464171656b67b4806 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 70.716 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 P40_00655 a38c515a1c3a39ad8de4f1c2ef21fcdd 356 SUPERFAMILY SSF54106 32 80 2.62E-6 T 13-10-2018 P40_00655 a38c515a1c3a39ad8de4f1c2ef21fcdd 356 Gene3D G3DSA:3.10.350.10 33 79 3.1E-10 T 13-10-2018 IPR036779 LysM domain superfamily P40_00655 a38c515a1c3a39ad8de4f1c2ef21fcdd 356 Pfam PF01476 LysM domain 34 80 4.1E-11 T 13-10-2018 IPR018392 LysM domain P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 Gene3D G3DSA:3.30.420.340 377 549 3.7E-46 T 13-10-2018 IPR038476 UvrC homology region 2 superfamily P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 SMART SM00278 552 571 3.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 SMART SM00278 584 603 6.2 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 SUPERFAMILY SSF82771 17 99 6.67E-22 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 Pfam PF12826 Helix-hairpin-helix motif 557 605 3.6E-10 T 13-10-2018 P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 Pfam PF01541 GIY-YIG catalytic domain 18 92 6.3E-10 T 13-10-2018 IPR000305 GIY-YIG endonuclease P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 SUPERFAMILY SSF46600 190 242 1.01E-12 T 13-10-2018 IPR036876 UVR domain superfamily P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 Gene3D G3DSA:3.40.1440.10 4 101 3.7E-30 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 SUPERFAMILY SSF47781 522 605 1.37E-23 T 13-10-2018 IPR010994 RuvA domain 2-like P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 Pfam PF02151 UvrB/uvrC motif 204 237 5.5E-10 T 13-10-2018 IPR001943 UVR domain GO:0005515 P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 Gene3D G3DSA:1.10.150.20 551 605 8.9E-22 T 13-10-2018 P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 539 3.0E-46 T 13-10-2018 IPR001162 UvrC family homology region P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 SMART SM00465 16 97 2.4E-23 T 13-10-2018 IPR000305 GIY-YIG endonuclease P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 585 1.9E-182 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 P40_09725 ea22f8a53d38806607a2ecd2d3b123df 606 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 603 27.561 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 374 511 7.9E-23 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 PIRSF PIRSF001174 12 791 5.0E-276 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 Gene3D G3DSA:3.30.230.10 606 792 8.4E-73 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 TIGRFAM TIGR00763 lon: endopeptidase La 32 789 7.6E-284 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 SMART SM00382 370 515 5.1E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 696 704 - T 13-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 591 788 1.7E-77 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 SUPERFAMILY SSF88697 32 221 8.7E-20 T 13-10-2018 IPR015947 PUA-like superfamily P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 SUPERFAMILY SSF52540 324 607 2.8E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 31 222 3.7E-25 T 13-10-2018 IPR003111 Lon, substrate-binding domain P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 Gene3D G3DSA:1.10.8.60 514 605 9.3E-28 T 13-10-2018 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 Gene3D G3DSA:3.40.50.300 335 513 2.6E-64 T 13-10-2018 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 614 630 1.1E-49 T 13-10-2018 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 693 712 1.1E-49 T 13-10-2018 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 723 742 1.1E-49 T 13-10-2018 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 378 397 1.1E-49 T 13-10-2018 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 746 764 1.1E-49 T 13-10-2018 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 Gene3D G3DSA:1.20.58.1480 142 266 1.2E-30 T 13-10-2018 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 Hamap MF_01973 Lon protease [lon]. 30 792 59.901 T 13-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 Gene3D G3DSA:2.30.130.40 20 135 8.2E-16 T 13-10-2018 P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 SMART SM00464 29 223 4.0E-31 T 13-10-2018 IPR003111 Lon, substrate-binding domain P40_10870 0057ffe9a879a92c8582f07de764a6d9 792 SUPERFAMILY SSF54211 614 790 6.83E-49 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_07165 6ad31b5c21d7929b1fd55d6d99975c40 299 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 294 3.4E-153 T 13-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 P40_07165 6ad31b5c21d7929b1fd55d6d99975c40 299 Gene3D G3DSA:3.40.50.1100 37 142 9.7E-110 T 13-10-2018 P40_07165 6ad31b5c21d7929b1fd55d6d99975c40 299 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 283 2.4E-67 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme P40_07165 6ad31b5c21d7929b1fd55d6d99975c40 299 SUPERFAMILY SSF53686 3 291 9.3E-92 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme P40_07165 6ad31b5c21d7929b1fd55d6d99975c40 299 Gene3D G3DSA:3.40.50.1100 9 290 9.7E-110 T 13-10-2018 P40_07165 6ad31b5c21d7929b1fd55d6d99975c40 299 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 P40_07165 6ad31b5c21d7929b1fd55d6d99975c40 299 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 294 2.8E-121 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 P40_11895 35cdc9bfa335bee0e346108d1f8c9d6a 515 Gene3D G3DSA:3.50.50.60 363 515 1.2E-17 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_11895 35cdc9bfa335bee0e346108d1f8c9d6a 515 SUPERFAMILY SSF51905 23 513 4.92E-65 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_11895 35cdc9bfa335bee0e346108d1f8c9d6a 515 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 162 171 3.3E-5 T 13-10-2018 P40_11895 35cdc9bfa335bee0e346108d1f8c9d6a 515 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 29 51 3.3E-5 T 13-10-2018 P40_11895 35cdc9bfa335bee0e346108d1f8c9d6a 515 Pfam PF05199 GMC oxidoreductase 374 507 4.0E-23 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 P40_11895 35cdc9bfa335bee0e346108d1f8c9d6a 515 PIRSF PIRSF000137 381 515 1.4E-13 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_11895 35cdc9bfa335bee0e346108d1f8c9d6a 515 PIRSF PIRSF000137 13 187 9.6E-19 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_11895 35cdc9bfa335bee0e346108d1f8c9d6a 515 PIRSF PIRSF000137 197 306 3.1E-4 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_11895 35cdc9bfa335bee0e346108d1f8c9d6a 515 Pfam PF00732 GMC oxidoreductase 29 292 1.5E-44 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_11895 35cdc9bfa335bee0e346108d1f8c9d6a 515 Gene3D G3DSA:3.50.50.60 25 167 4.6E-22 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_11895 35cdc9bfa335bee0e346108d1f8c9d6a 515 Gene3D G3DSA:3.50.50.60 176 306 2.5E-13 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_07305 6dac85db4a1417443c4ca4b252bd153a 277 SUPERFAMILY SSF52540 4 226 1.14E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07305 6dac85db4a1417443c4ca4b252bd153a 277 Gene3D G3DSA:3.40.50.300 1 263 1.0E-61 T 13-10-2018 P40_07305 6dac85db4a1417443c4ca4b252bd153a 277 Pfam PF00005 ABC transporter 24 166 1.1E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_07305 6dac85db4a1417443c4ca4b252bd153a 277 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_07305 6dac85db4a1417443c4ca4b252bd153a 277 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 6.0E-102 T 13-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 P40_07305 6dac85db4a1417443c4ca4b252bd153a 277 SMART SM00382 33 216 2.5E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_07680 6f2bb08f048545d71989e45fcfe24162 474 Pfam PF00171 Aldehyde dehydrogenase family 13 472 6.9E-152 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_07680 6f2bb08f048545d71989e45fcfe24162 474 Gene3D G3DSA:3.40.309.10 250 441 8.7E-158 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_07680 6f2bb08f048545d71989e45fcfe24162 474 Gene3D G3DSA:3.40.605.10 26 468 8.7E-158 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_07680 6f2bb08f048545d71989e45fcfe24162 474 SUPERFAMILY SSF53720 5 473 1.31E-149 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_07680 6f2bb08f048545d71989e45fcfe24162 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 P40_11845 9eb0d06cd70eb1159cd689c9078d06bb 131 Pfam PF13411 MerR HTH family regulatory protein 7 72 1.3E-15 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_11845 9eb0d06cd70eb1159cd689c9078d06bb 131 Gene3D G3DSA:1.10.1660.10 1 127 1.2E-25 T 13-10-2018 P40_11845 9eb0d06cd70eb1159cd689c9078d06bb 131 SMART SM00422 7 74 5.2E-16 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_11845 9eb0d06cd70eb1159cd689c9078d06bb 131 SUPERFAMILY SSF46955 7 119 8.06E-24 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_19140 013074bea5914bf88717ca0d164495d8 557 Pfam PF08502 LeuA allosteric (dimerisation) domain 420 548 9.9E-14 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_19140 013074bea5914bf88717ca0d164495d8 557 SUPERFAMILY SSF51569 19 327 1.83E-96 T 13-10-2018 P40_19140 013074bea5914bf88717ca0d164495d8 557 SMART SM00917 419 549 6.4E-13 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_19140 013074bea5914bf88717ca0d164495d8 557 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 37 53 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_19140 013074bea5914bf88717ca0d164495d8 557 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 2 550 49.917 T 13-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_19140 013074bea5914bf88717ca0d164495d8 557 Gene3D G3DSA:3.20.20.70 9 373 3.9E-146 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_19140 013074bea5914bf88717ca0d164495d8 557 SUPERFAMILY SSF89000 385 435 5.1E-11 T 13-10-2018 P40_19140 013074bea5914bf88717ca0d164495d8 557 SUPERFAMILY SSF110921 449 548 1.01E-15 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_19140 013074bea5914bf88717ca0d164495d8 557 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 240 253 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_19140 013074bea5914bf88717ca0d164495d8 557 Pfam PF00682 HMGL-like 32 310 1.5E-74 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 P40_19140 013074bea5914bf88717ca0d164495d8 557 Gene3D G3DSA:3.30.160.270 374 548 1.5E-35 T 13-10-2018 P40_21110 e12b8c20eb3379f87bdf51b218e093e2 259 Gene3D G3DSA:3.40.50.300 1 218 9.1E-54 T 13-10-2018 P40_21110 e12b8c20eb3379f87bdf51b218e093e2 259 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_21110 e12b8c20eb3379f87bdf51b218e093e2 259 SMART SM00382 30 199 1.2E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_21110 e12b8c20eb3379f87bdf51b218e093e2 259 SUPERFAMILY SSF52540 5 218 2.05E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_21110 e12b8c20eb3379f87bdf51b218e093e2 259 Pfam PF00005 ABC transporter 21 149 2.2E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_09170 0efe40c4f3be651c98faa69470051d10 185 Gene3D G3DSA:3.30.1360.40 31 105 1.2E-66 T 13-10-2018 P40_09170 0efe40c4f3be651c98faa69470051d10 185 SUPERFAMILY SSF55194 3 184 1.44E-69 T 13-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 P40_09170 0efe40c4f3be651c98faa69470051d10 185 Gene3D G3DSA:1.10.132.20 12 182 1.2E-66 T 13-10-2018 P40_09170 0efe40c4f3be651c98faa69470051d10 185 Pfam PF01765 Ribosome recycling factor 23 183 1.3E-61 T 13-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 P40_09170 0efe40c4f3be651c98faa69470051d10 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 5.3E-69 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 P40_09170 0efe40c4f3be651c98faa69470051d10 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.224 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 P40_12670 e9644a13ad350552cfaa51b4b4a2765b 577 SUPERFAMILY SSF56801 16 569 1.11E-113 T 13-10-2018 P40_12670 e9644a13ad350552cfaa51b4b4a2765b 577 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_12670 e9644a13ad350552cfaa51b4b4a2765b 577 Pfam PF13193 AMP-binding enzyme C-terminal domain 480 556 2.5E-9 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_12670 e9644a13ad350552cfaa51b4b4a2765b 577 Gene3D G3DSA:3.30.300.30 468 574 1.7E-22 T 13-10-2018 P40_12670 e9644a13ad350552cfaa51b4b4a2765b 577 Pfam PF00501 AMP-binding enzyme 24 466 2.6E-68 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_12670 e9644a13ad350552cfaa51b4b4a2765b 577 Gene3D G3DSA:3.40.50.12780 10 372 6.3E-55 T 13-10-2018 P40_12670 e9644a13ad350552cfaa51b4b4a2765b 577 Gene3D G3DSA:3.40.50.12780 373 466 2.6E-21 T 13-10-2018 P40_18365 0042a416a1c7105ac1a07f4ff8c7b62e 322 Gene3D G3DSA:3.30.930.10 65 273 3.2E-54 T 13-10-2018 P40_18365 0042a416a1c7105ac1a07f4ff8c7b62e 322 SUPERFAMILY SSF55681 80 272 1.69E-52 T 13-10-2018 P40_18365 0042a416a1c7105ac1a07f4ff8c7b62e 322 Pfam PF08279 HTH domain 15 58 3.6E-12 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 P40_18365 0042a416a1c7105ac1a07f4ff8c7b62e 322 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 6 320 32.083 T 13-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 P40_18365 0042a416a1c7105ac1a07f4ff8c7b62e 322 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site P40_18365 0042a416a1c7105ac1a07f4ff8c7b62e 322 Pfam PF02237 Biotin protein ligase C terminal domain 277 320 7.3E-9 T 13-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_18365 0042a416a1c7105ac1a07f4ff8c7b62e 322 Gene3D G3DSA:2.30.30.100 275 322 2.0E-13 T 13-10-2018 P40_18365 0042a416a1c7105ac1a07f4ff8c7b62e 322 Gene3D G3DSA:1.10.10.10 2 63 5.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_18365 0042a416a1c7105ac1a07f4ff8c7b62e 322 Pfam PF03099 Biotin/lipoate A/B protein ligase family 103 210 1.3E-11 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 P40_18365 0042a416a1c7105ac1a07f4ff8c7b62e 322 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 5 75 2.8E-21 T 13-10-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 P40_18365 0042a416a1c7105ac1a07f4ff8c7b62e 322 SUPERFAMILY SSF46785 4 60 1.77E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_18365 0042a416a1c7105ac1a07f4ff8c7b62e 322 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 320 4.3E-52 T 13-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_18365 0042a416a1c7105ac1a07f4ff8c7b62e 322 SUPERFAMILY SSF50037 275 320 2.66E-8 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal P40_10805 5cea5bf6681cd3cc53d5eb716f5c6467 330 SUPERFAMILY SSF50129 4 145 3.35E-41 T 13-10-2018 IPR011032 GroES-like superfamily P40_10805 5cea5bf6681cd3cc53d5eb716f5c6467 330 Gene3D G3DSA:3.90.180.10 21 327 5.4E-117 T 13-10-2018 P40_10805 5cea5bf6681cd3cc53d5eb716f5c6467 330 SMART SM00829 14 326 1.1E-7 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P40_10805 5cea5bf6681cd3cc53d5eb716f5c6467 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 328 6.5E-129 T 13-10-2018 IPR014188 Acrylyl-CoA reductase AcuI P40_10805 5cea5bf6681cd3cc53d5eb716f5c6467 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 87 1.5E-5 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P40_10805 5cea5bf6681cd3cc53d5eb716f5c6467 330 SUPERFAMILY SSF51735 117 294 1.12E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_10805 5cea5bf6681cd3cc53d5eb716f5c6467 330 Gene3D G3DSA:3.40.50.720 127 296 5.4E-117 T 13-10-2018 P40_10805 5cea5bf6681cd3cc53d5eb716f5c6467 330 Pfam PF00107 Zinc-binding dehydrogenase 160 286 2.6E-13 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 P40_20695 82b52960bc14e1aac022fc7870bc621a 305 Pfam PF01758 Sodium Bile acid symporter family 19 206 1.6E-32 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 P40_20695 82b52960bc14e1aac022fc7870bc621a 305 Gene3D G3DSA:1.20.1530.20 5 294 1.5E-80 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 SUPERFAMILY SSF54849 136 206 6.87E-23 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 SUPERFAMILY SSF52029 184 375 2.84E-85 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 526 6.2E-260 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 524 5.7E-101 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 13-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 PRINTS PR00298 60kDa chaperonin signature 82 109 4.1E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 PRINTS PR00298 60kDa chaperonin signature 397 418 4.1E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 PRINTS PR00298 60kDa chaperonin signature 267 290 4.1E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 PRINTS PR00298 60kDa chaperonin signature 26 52 4.1E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 PRINTS PR00298 60kDa chaperonin signature 349 374 4.1E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 Hamap MF_00600 60 kDa chaperonin [groL]. 1 545 42.318 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 Gene3D G3DSA:3.30.260.10 135 409 2.1E-239 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 Gene3D G3DSA:3.50.7.10 191 371 2.1E-239 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 Gene3D G3DSA:1.10.560.10 7 520 2.1E-239 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily P40_16255 e3fb26012314f949d15d6ec22eaae8dd 546 SUPERFAMILY SSF48592 6 520 9.92E-79 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily P40_19170 a384f0b4b7a30d87294ddd40cb0c32f8 228 Gene3D G3DSA:3.40.109.10 1 223 1.3E-61 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 P40_19170 a384f0b4b7a30d87294ddd40cb0c32f8 228 SUPERFAMILY SSF55469 9 224 1.96E-42 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 P40_19170 a384f0b4b7a30d87294ddd40cb0c32f8 228 Pfam PF00881 Nitroreductase family 13 202 1.2E-30 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 P40_08635 da5a007c7dcf5d8f708540134f63f239 703 SUPERFAMILY SSF53335 139 345 1.27E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_08635 da5a007c7dcf5d8f708540134f63f239 703 SUPERFAMILY SSF53335 398 695 1.05E-61 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_08635 da5a007c7dcf5d8f708540134f63f239 703 Gene3D G3DSA:3.30.2130.30 5 248 1.4E-90 T 13-10-2018 P40_08635 da5a007c7dcf5d8f708540134f63f239 703 Pfam PF01170 Putative RNA methylase family UPF0020 154 350 1.2E-36 T 13-10-2018 IPR000241 Putative RNA methylase domain P40_08635 da5a007c7dcf5d8f708540134f63f239 703 PIRSF PIRSF037618 1 701 2.1E-216 T 13-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 P40_08635 da5a007c7dcf5d8f708540134f63f239 703 Gene3D G3DSA:3.30.750.80 394 485 2.8E-31 T 13-10-2018 P40_08635 da5a007c7dcf5d8f708540134f63f239 703 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 298 304 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 P40_08635 da5a007c7dcf5d8f708540134f63f239 703 Gene3D G3DSA:3.40.50.150 486 699 2.3E-63 T 13-10-2018 P40_08635 da5a007c7dcf5d8f708540134f63f239 703 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 190 201 - T 13-10-2018 IPR000241 Putative RNA methylase domain P40_08635 da5a007c7dcf5d8f708540134f63f239 703 Gene3D G3DSA:3.40.50.150 161 363 1.4E-90 T 13-10-2018 P40_08635 da5a007c7dcf5d8f708540134f63f239 703 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 479 655 2.1E-18 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 P40_00150 c0ab5553507be3cec0533090c4d932d0 587 Gene3D G3DSA:3.40.50.720 396 557 3.4E-37 T 13-10-2018 P40_00150 c0ab5553507be3cec0533090c4d932d0 587 SUPERFAMILY SSF51735 398 527 9.15E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_00150 c0ab5553507be3cec0533090c4d932d0 587 Gene3D G3DSA:1.20.1530.20 2 383 1.8E-79 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily P40_00150 c0ab5553507be3cec0533090c4d932d0 587 Pfam PF02254 TrkA-N domain 399 513 2.6E-23 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 P40_00150 c0ab5553507be3cec0533090c4d932d0 587 Pfam PF00999 Sodium/hydrogen exchanger family 10 371 2.7E-62 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 P40_00150 c0ab5553507be3cec0533090c4d932d0 587 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 13 280 2.7E-75 T 13-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 P40_15415 f84509b0608b61537313a64bb95cd815 213 Gene3D G3DSA:3.90.850.10 1 208 8.7E-60 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 P40_15415 f84509b0608b61537313a64bb95cd815 213 SUPERFAMILY SSF56529 2 204 6.28E-59 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 P40_15415 f84509b0608b61537313a64bb95cd815 213 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 2 203 4.0E-50 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 P40_15415 f84509b0608b61537313a64bb95cd815 213 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 1 202 1.2E-83 T 13-10-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 P40_15605 d61a6e098e2406eec1ae61cb8e0e02af 341 Gene3D G3DSA:3.40.190.10 31 308 4.1E-62 T 13-10-2018 P40_15605 d61a6e098e2406eec1ae61cb8e0e02af 341 SUPERFAMILY SSF53850 33 263 2.99E-31 T 13-10-2018 P40_15605 d61a6e098e2406eec1ae61cb8e0e02af 341 Pfam PF09084 NMT1/THI5 like 40 257 5.3E-37 T 13-10-2018 IPR015168 SsuA/THI5-like P40_15605 d61a6e098e2406eec1ae61cb8e0e02af 341 Gene3D G3DSA:3.40.190.10 112 218 4.1E-62 T 13-10-2018 P40_17835 61796709ee5327bd37cc2815b487c69d 271 SUPERFAMILY SSF48452 24 117 4.55E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_17835 61796709ee5327bd37cc2815b487c69d 271 Pfam PF13525 Outer membrane lipoprotein 26 232 1.5E-68 T 13-10-2018 IPR039565 Outer membrane lipoprotein BamD-like P40_17835 61796709ee5327bd37cc2815b487c69d 271 Gene3D G3DSA:1.25.40.10 28 249 8.1E-58 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_17835 61796709ee5327bd37cc2815b487c69d 271 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 239 35.945 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD P40_17835 61796709ee5327bd37cc2815b487c69d 271 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 4 244 1.9E-83 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 SUPERFAMILY SSF82714 703 786 7.32E-19 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 Gene3D G3DSA:3.30.70.1440 649 847 5.0E-291 T 13-10-2018 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 Gene3D G3DSA:1.20.1640.10 10 502 5.0E-291 T 13-10-2018 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 Gene3D G3DSA:3.30.2090.10 701 789 5.0E-291 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 Gene3D G3DSA:3.30.70.1430 553 648 5.0E-291 T 13-10-2018 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 SUPERFAMILY SSF82693 551 648 9.24E-15 T 13-10-2018 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 Pfam PF00873 AcrB/AcrD/AcrF family 5 1008 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 SUPERFAMILY SSF82866 290 489 2.88E-46 T 13-10-2018 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 SUPERFAMILY SSF82693 40 131 1.41E-21 T 13-10-2018 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 Gene3D G3DSA:3.30.2090.10 179 269 5.0E-291 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 SUPERFAMILY SSF82693 136 324 2.2E-22 T 13-10-2018 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 Gene3D G3DSA:3.30.70.1430 40 797 5.0E-291 T 13-10-2018 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 SUPERFAMILY SSF82866 812 1010 1.83E-44 T 13-10-2018 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 SUPERFAMILY SSF82693 661 835 2.96E-11 T 13-10-2018 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 Gene3D G3DSA:1.20.1640.10 503 1005 5.0E-291 T 13-10-2018 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 SUPERFAMILY SSF82714 183 266 3.14E-16 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 Gene3D G3DSA:3.30.70.1320 134 326 5.0E-291 T 13-10-2018 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 7.3E-69 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 PRINTS PR00702 Acriflavin resistance protein family signature 538 555 7.3E-69 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 7.3E-69 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.3E-69 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 7.3E-69 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 7.3E-69 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.3E-69 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 7.3E-69 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_20775 b06cdcaa2eebcb4745e678ad58e67796 1026 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 7.3E-69 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_01935 7f7e74d5e8342ca4cc9d806ad411eda2 448 Gene3D G3DSA:1.10.287.130 188 294 5.5E-9 T 13-10-2018 P40_01935 7f7e74d5e8342ca4cc9d806ad411eda2 448 Gene3D G3DSA:3.30.565.10 302 448 2.8E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_01935 7f7e74d5e8342ca4cc9d806ad411eda2 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 447 6.1E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_01935 7f7e74d5e8342ca4cc9d806ad411eda2 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 6.1E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_01935 7f7e74d5e8342ca4cc9d806ad411eda2 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 6.1E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_01935 7f7e74d5e8342ca4cc9d806ad411eda2 448 SUPERFAMILY SSF55874 310 448 2.36E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_01935 7f7e74d5e8342ca4cc9d806ad411eda2 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 447 3.8E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_01935 7f7e74d5e8342ca4cc9d806ad411eda2 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 289 1.3E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_01935 7f7e74d5e8342ca4cc9d806ad411eda2 448 SMART SM00387 344 448 2.9E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_01935 7f7e74d5e8342ca4cc9d806ad411eda2 448 SUPERFAMILY SSF47384 222 290 1.41E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_20965 9afac59384c3330b6e290b91bc01aeda 314 SUPERFAMILY SSF51197 48 303 4.85E-63 T 13-10-2018 P40_20965 9afac59384c3330b6e290b91bc01aeda 314 Gene3D G3DSA:2.60.120.620 13 310 4.8E-103 T 13-10-2018 P40_20965 9afac59384c3330b6e290b91bc01aeda 314 TIGRFAM TIGR02408 ectoine_ThpD: ectoine hydroxylase 37 303 8.5E-108 T 13-10-2018 IPR012774 Ectoine dioxygenase GO:0016706|GO:0055114 P40_20965 9afac59384c3330b6e290b91bc01aeda 314 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 59 275 6.3E-30 T 13-10-2018 IPR008775 Phytanoyl-CoA dioxygenase P40_06845 5cdbeae22be321f757609be4e4f620fe 389 Pfam PF00691 OmpA family 277 372 2.4E-23 T 13-10-2018 IPR006665 OmpA-like domain P40_06845 5cdbeae22be321f757609be4e4f620fe 389 ProSitePatterns PS01068 OmpA-like domain. 309 354 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 P40_06845 5cdbeae22be321f757609be4e4f620fe 389 SUPERFAMILY SSF103088 247 377 2.75E-37 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_06845 5cdbeae22be321f757609be4e4f620fe 389 SUPERFAMILY SSF56925 31 171 3.4E-10 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P40_06845 5cdbeae22be321f757609be4e4f620fe 389 Gene3D G3DSA:4.10.1080.10 191 268 1.2E-5 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 P40_06845 5cdbeae22be321f757609be4e4f620fe 389 Gene3D G3DSA:2.40.160.20 40 187 2.2E-11 T 13-10-2018 P40_06845 5cdbeae22be321f757609be4e4f620fe 389 Pfam PF13505 Outer membrane protein beta-barrel domain 11 171 4.7E-11 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel P40_06845 5cdbeae22be321f757609be4e4f620fe 389 Gene3D G3DSA:3.30.1330.60 269 380 1.2E-37 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_06845 5cdbeae22be321f757609be4e4f620fe 389 Pfam PF02412 Thrombospondin type 3 repeat 203 221 8.5E-4 T 13-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 P40_06845 5cdbeae22be321f757609be4e4f620fe 389 Pfam PF02412 Thrombospondin type 3 repeat 231 251 5.9E-6 T 13-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 P40_06845 5cdbeae22be321f757609be4e4f620fe 389 PRINTS PR01021 OMPA domain signature 322 338 8.3E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_06845 5cdbeae22be321f757609be4e4f620fe 389 PRINTS PR01021 OMPA domain signature 277 299 8.3E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_06845 5cdbeae22be321f757609be4e4f620fe 389 PRINTS PR01021 OMPA domain signature 307 322 8.3E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P40_06845 5cdbeae22be321f757609be4e4f620fe 389 SUPERFAMILY SSF103647 200 262 5.36E-18 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 P40_09290 27545a28e1a627c46adf2cef21424599 258 Gene3D G3DSA:2.70.70.10 129 254 7.0E-34 T 13-10-2018 IPR011055 Duplicated hybrid motif P40_09290 27545a28e1a627c46adf2cef21424599 258 Pfam PF01476 LysM domain 49 90 2.2E-13 T 13-10-2018 IPR018392 LysM domain P40_09290 27545a28e1a627c46adf2cef21424599 258 Pfam PF01551 Peptidase family M23 158 250 2.2E-28 T 13-10-2018 IPR016047 Peptidase M23 P40_09290 27545a28e1a627c46adf2cef21424599 258 SMART SM00257 48 92 6.1E-13 T 13-10-2018 IPR018392 LysM domain P40_09290 27545a28e1a627c46adf2cef21424599 258 Gene3D G3DSA:3.10.350.10 48 90 2.7E-14 T 13-10-2018 IPR036779 LysM domain superfamily P40_09290 27545a28e1a627c46adf2cef21424599 258 SUPERFAMILY SSF51261 51 254 3.98E-47 T 13-10-2018 IPR011055 Duplicated hybrid motif P40_18010 9119219cf01149a7b22da3f7017db0cb 445 SUPERFAMILY SSF56112 100 313 7.88E-23 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_18010 9119219cf01149a7b22da3f7017db0cb 445 Gene3D G3DSA:1.10.510.10 179 329 1.5E-5 T 13-10-2018 P40_18010 9119219cf01149a7b22da3f7017db0cb 445 Pfam PF03109 ABC1 family 119 234 3.0E-33 T 13-10-2018 IPR004147 UbiB domain P40_04210 254a57bfafc93930c0b04f5703662d36 172 Pfam PF13505 Outer membrane protein beta-barrel domain 14 172 1.9E-16 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel P40_04210 254a57bfafc93930c0b04f5703662d36 172 SUPERFAMILY SSF56925 26 172 8.89E-16 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P40_04210 254a57bfafc93930c0b04f5703662d36 172 Gene3D G3DSA:2.40.160.20 17 172 9.9E-10 T 13-10-2018 P40_02340 4129ea2593a9a43db47fe83d2dc0db03 439 Pfam PF00672 HAMP domain 170 220 5.9E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_02340 4129ea2593a9a43db47fe83d2dc0db03 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 424 6.3E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_02340 4129ea2593a9a43db47fe83d2dc0db03 439 SUPERFAMILY SSF55874 284 426 3.93E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_02340 4129ea2593a9a43db47fe83d2dc0db03 439 Gene3D G3DSA:3.30.565.10 288 429 3.2E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_02340 4129ea2593a9a43db47fe83d2dc0db03 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 4.2E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_02340 4129ea2593a9a43db47fe83d2dc0db03 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 4.2E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_02340 4129ea2593a9a43db47fe83d2dc0db03 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 4.2E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_02340 4129ea2593a9a43db47fe83d2dc0db03 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 4.2E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_02340 4129ea2593a9a43db47fe83d2dc0db03 439 SMART SM00387 318 426 3.1E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_02340 4129ea2593a9a43db47fe83d2dc0db03 439 SMART SM00304 170 223 4.8E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_02340 4129ea2593a9a43db47fe83d2dc0db03 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 278 9.4E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_02340 4129ea2593a9a43db47fe83d2dc0db03 439 SUPERFAMILY SSF47384 208 280 1.37E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_02340 4129ea2593a9a43db47fe83d2dc0db03 439 SMART SM00388 224 282 4.6E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_02340 4129ea2593a9a43db47fe83d2dc0db03 439 Gene3D G3DSA:1.10.287.130 168 277 6.4E-21 T 13-10-2018 P40_04080 01168e580a7bdda6f923a5bf434dabd7 640 ProSitePatterns PS00802 Transketolase signature 2. 434 450 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 P40_04080 01168e580a7bdda6f923a5bf434dabd7 640 Pfam PF02779 Transketolase, pyrimidine binding domain 328 487 1.1E-37 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain P40_04080 01168e580a7bdda6f923a5bf434dabd7 640 SMART SM00861 328 492 2.9E-63 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain P40_04080 01168e580a7bdda6f923a5bf434dabd7 640 SUPERFAMILY SSF52518 15 358 8.11E-79 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold P40_04080 01168e580a7bdda6f923a5bf434dabd7 640 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 18 289 1.4E-116 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 P40_04080 01168e580a7bdda6f923a5bf434dabd7 640 SUPERFAMILY SSF52518 321 490 6.51E-59 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold P40_04080 01168e580a7bdda6f923a5bf434dabd7 640 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 20 629 2.6E-249 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 P40_04080 01168e580a7bdda6f923a5bf434dabd7 640 ProSitePatterns PS00801 Transketolase signature 1. 43 62 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 P40_04080 01168e580a7bdda6f923a5bf434dabd7 640 Pfam PF02780 Transketolase, C-terminal domain 504 621 1.1E-23 T 13-10-2018 IPR033248 Transketolase, C-terminal domain P40_04080 01168e580a7bdda6f923a5bf434dabd7 640 SUPERFAMILY SSF52922 500 629 5.23E-31 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 P40_04080 01168e580a7bdda6f923a5bf434dabd7 640 Gene3D G3DSA:3.40.50.920 504 630 8.4E-40 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 P40_04080 01168e580a7bdda6f923a5bf434dabd7 640 Gene3D G3DSA:3.40.50.970 327 498 1.6E-63 T 13-10-2018 P40_04080 01168e580a7bdda6f923a5bf434dabd7 640 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 17 630 44.245 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 P40_05035 b7580c7edb0794df3a4b84308ab6500c 143 Pfam PF04170 NlpE N-terminal domain 33 135 3.3E-21 T 13-10-2018 IPR007298 Copper resistance lipoprotein NlpE P40_05035 b7580c7edb0794df3a4b84308ab6500c 143 Gene3D G3DSA:2.40.128.640 22 143 4.0E-17 T 13-10-2018 P40_01155 6939479ee90afad386135163f6c031e9 233 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_01155 6939479ee90afad386135163f6c031e9 233 Pfam PF00005 ABC transporter 18 165 3.2E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_01155 6939479ee90afad386135163f6c031e9 233 SMART SM00382 27 213 6.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_01155 6939479ee90afad386135163f6c031e9 233 SUPERFAMILY SSF52540 1 219 1.7E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_01155 6939479ee90afad386135163f6c031e9 233 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 3.7E-85 T 13-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 P40_01155 6939479ee90afad386135163f6c031e9 233 Gene3D G3DSA:3.40.50.300 1 226 6.5E-63 T 13-10-2018 P40_00400 639ab2e9930276993940215286bfcd2d 269 Gene3D G3DSA:3.40.30.10 128 269 2.4E-29 T 13-10-2018 P40_00400 639ab2e9930276993940215286bfcd2d 269 SUPERFAMILY SSF52833 132 268 1.62E-28 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_00400 639ab2e9930276993940215286bfcd2d 269 Pfam PF00578 AhpC/TSA family 135 246 3.6E-12 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P40_00400 639ab2e9930276993940215286bfcd2d 269 ProSitePatterns PS00194 Thioredoxin family active site. 161 179 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 P40_00400 639ab2e9930276993940215286bfcd2d 269 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 105 1.2E-6 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 P40_05650 33a4875c982218e8d7509dc9e1bbfda7 181 Gene3D G3DSA:3.90.1520.10 1 179 2.1E-45 T 13-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 P40_05650 33a4875c982218e8d7509dc9e1bbfda7 181 SUPERFAMILY SSF111126 1 178 1.67E-37 T 13-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily P40_05650 33a4875c982218e8d7509dc9e1bbfda7 181 Pfam PF07700 Haem-NO-binding 2 160 1.1E-36 T 13-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 P40_09235 53b74250e8c49358b3944b3765ccb785 323 Gene3D G3DSA:3.90.226.10 1 318 3.6E-115 T 13-10-2018 P40_09235 53b74250e8c49358b3944b3765ccb785 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 1.8E-48 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_09235 53b74250e8c49358b3944b3765ccb785 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 1.8E-48 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_09235 53b74250e8c49358b3944b3765ccb785 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 1.8E-48 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_09235 53b74250e8c49358b3944b3765ccb785 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 1.8E-48 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_09235 53b74250e8c49358b3944b3765ccb785 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 1.8E-48 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_09235 53b74250e8c49358b3944b3765ccb785 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 1.8E-48 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_09235 53b74250e8c49358b3944b3765ccb785 323 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 50.104 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_09235 53b74250e8c49358b3944b3765ccb785 323 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 148 2.0E-62 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_09235 53b74250e8c49358b3944b3765ccb785 323 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 318 9.0E-155 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_09235 53b74250e8c49358b3944b3765ccb785 323 SUPERFAMILY SSF52096 5 316 2.13E-99 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_09005 ab010cfe95cb0760d701ebddb4eebc05 241 SUPERFAMILY SSF52540 4 228 6.8E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_09005 ab010cfe95cb0760d701ebddb4eebc05 241 Gene3D G3DSA:3.40.50.300 1 236 1.3E-57 T 13-10-2018 P40_09005 ab010cfe95cb0760d701ebddb4eebc05 241 Pfam PF00005 ABC transporter 21 163 7.9E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_09005 ab010cfe95cb0760d701ebddb4eebc05 241 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_09005 ab010cfe95cb0760d701ebddb4eebc05 241 SMART SM00382 30 234 6.7E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_18190 494d253db46a5120a0b1c4971382ca16 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 13-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18190 494d253db46a5120a0b1c4971382ca16 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.385 T 13-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid P40_18190 494d253db46a5120a0b1c4971382ca16 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 6.2E-28 T 13-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18190 494d253db46a5120a0b1c4971382ca16 101 SUPERFAMILY SSF57716 2 101 3.66E-39 T 13-10-2018 P40_18190 494d253db46a5120a0b1c4971382ca16 101 Gene3D G3DSA:4.10.830.10 40 101 3.7E-24 T 13-10-2018 P40_00250 1d9d56c24e454af50de9f40c8c372202 153 SUPERFAMILY SSF141322 83 143 7.19E-9 T 13-10-2018 P40_00250 1d9d56c24e454af50de9f40c8c372202 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 7 143 1.5E-26 T 13-10-2018 IPR002810 NfeD-like, C-terminal domain P40_00250 1d9d56c24e454af50de9f40c8c372202 153 Gene3D G3DSA:2.40.50.140 78 151 5.6E-12 T 13-10-2018 P40_08995 8a08a362665e83be07881b220013aa61 408 Gene3D G3DSA:3.40.50.2300 148 371 9.4E-113 T 13-10-2018 P40_08995 8a08a362665e83be07881b220013aa61 408 SUPERFAMILY SSF53822 28 375 2.36E-67 T 13-10-2018 IPR028082 Periplasmic binding protein-like I P40_08995 8a08a362665e83be07881b220013aa61 408 Gene3D G3DSA:3.40.50.2300 37 365 9.4E-113 T 13-10-2018 P40_08995 8a08a362665e83be07881b220013aa61 408 Pfam PF13458 Periplasmic binding protein 27 372 1.3E-57 T 13-10-2018 IPR028081 Leucine-binding protein domain P40_11245 4d864be19e81391dacc9498b1dd59ca5 370 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 62 329 4.0E-15 T 13-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF P40_11245 4d864be19e81391dacc9498b1dd59ca5 370 Gene3D G3DSA:1.20.1260.10 119 337 1.4E-41 T 13-10-2018 IPR012347 Ferritin-like P40_11245 4d864be19e81391dacc9498b1dd59ca5 370 SUPERFAMILY SSF47240 112 342 6.57E-69 T 13-10-2018 IPR009078 Ferritin-like superfamily P40_00980 b118ce6d81d2f23ee3e61ca4b231d18e 306 Pfam PF00482 Type II secretion system (T2SS), protein F 143 262 1.6E-7 T 13-10-2018 IPR018076 Type II secretion system F domain P40_21555 9f123ceb89fdda6b2a8d9cd9850e28ae 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 8.0E-24 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21555 9f123ceb89fdda6b2a8d9cd9850e28ae 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 8.0E-24 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21555 9f123ceb89fdda6b2a8d9cd9850e28ae 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 8.0E-24 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21555 9f123ceb89fdda6b2a8d9cd9850e28ae 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 8.0E-24 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21555 9f123ceb89fdda6b2a8d9cd9850e28ae 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 8.0E-24 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21555 9f123ceb89fdda6b2a8d9cd9850e28ae 178 SUPERFAMILY SSF47928 3 105 8.89E-24 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21555 9f123ceb89fdda6b2a8d9cd9850e28ae 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 19.499 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21555 9f123ceb89fdda6b2a8d9cd9850e28ae 178 Gene3D G3DSA:1.10.520.20 2 106 4.5E-31 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21555 9f123ceb89fdda6b2a8d9cd9850e28ae 178 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 13-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21555 9f123ceb89fdda6b2a8d9cd9850e28ae 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 4.3E-53 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_21555 9f123ceb89fdda6b2a8d9cd9850e28ae 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 176 2.1E-47 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P40_06380 554873d1f7ef8237d2a84aeb063d9fb0 213 Gene3D G3DSA:3.40.50.720 1 212 4.2E-54 T 13-10-2018 P40_06380 554873d1f7ef8237d2a84aeb063d9fb0 213 Pfam PF13460 NAD(P)H-binding 7 197 4.2E-34 T 13-10-2018 IPR016040 NAD(P)-binding domain P40_06380 554873d1f7ef8237d2a84aeb063d9fb0 213 SUPERFAMILY SSF51735 1 211 2.7E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_10680 005c1d4d837be5d793b3f49852ddaaf0 350 SUPERFAMILY SSF54523 30 307 2.04E-12 T 13-10-2018 P40_10680 005c1d4d837be5d793b3f49852ddaaf0 350 PIRSF PIRSF002786 1 317 1.6E-43 T 13-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 P40_10680 005c1d4d837be5d793b3f49852ddaaf0 350 Gene3D G3DSA:1.10.40.60 98 211 5.9E-47 T 13-10-2018 IPR038072 GspK, central domain superfamily P40_10680 005c1d4d837be5d793b3f49852ddaaf0 350 Gene3D G3DSA:3.30.1300.30 38 303 5.9E-47 T 13-10-2018 P40_10680 005c1d4d837be5d793b3f49852ddaaf0 350 SUPERFAMILY SSF158544 100 194 6.02E-14 T 13-10-2018 IPR038072 GspK, central domain superfamily P40_10680 005c1d4d837be5d793b3f49852ddaaf0 350 Gene3D G3DSA:1.10.40.60 212 278 5.9E-47 T 13-10-2018 IPR038072 GspK, central domain superfamily P40_10680 005c1d4d837be5d793b3f49852ddaaf0 350 Pfam PF03934 Type II secretion system (T2SS), protein K 23 307 2.9E-52 T 13-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 P40_04085 d8b75cfe852bef1e15d6fa7609eea5ee 300 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 87 103 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site P40_04085 d8b75cfe852bef1e15d6fa7609eea5ee 300 Pfam PF00348 Polyprenyl synthetase 37 271 7.4E-59 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 P40_04085 d8b75cfe852bef1e15d6fa7609eea5ee 300 Gene3D G3DSA:1.10.600.10 7 300 2.1E-99 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily P40_04085 d8b75cfe852bef1e15d6fa7609eea5ee 300 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 219 231 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site P40_04085 d8b75cfe852bef1e15d6fa7609eea5ee 300 SUPERFAMILY SSF48576 12 284 5.04E-85 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily P40_18600 a4b3d1dc310de7d0c6c8d383b5ef442f 653 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 374 606 8.6E-20 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_18600 a4b3d1dc310de7d0c6c8d383b5ef442f 653 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 1 323 7.0E-71 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 P40_18600 a4b3d1dc310de7d0c6c8d383b5ef442f 653 SUPERFAMILY SSF51905 345 637 6.91E-32 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_18600 a4b3d1dc310de7d0c6c8d383b5ef442f 653 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 372 394 4.0E-7 T 13-10-2018 P40_18600 a4b3d1dc310de7d0c6c8d383b5ef442f 653 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 586 600 4.0E-7 T 13-10-2018 P40_18600 a4b3d1dc310de7d0c6c8d383b5ef442f 653 Gene3D G3DSA:3.40.50.720 374 630 1.1E-47 T 13-10-2018 P40_18600 a4b3d1dc310de7d0c6c8d383b5ef442f 653 Gene3D G3DSA:3.50.50.60 467 593 1.1E-47 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_18600 a4b3d1dc310de7d0c6c8d383b5ef442f 653 SUPERFAMILY SSF51395 1 343 7.59E-113 T 13-10-2018 P40_18600 a4b3d1dc310de7d0c6c8d383b5ef442f 653 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 497 515 1.0E-15 T 13-10-2018 P40_18600 a4b3d1dc310de7d0c6c8d383b5ef442f 653 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 585 601 1.0E-15 T 13-10-2018 P40_18600 a4b3d1dc310de7d0c6c8d383b5ef442f 653 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 455 473 1.0E-15 T 13-10-2018 P40_18600 a4b3d1dc310de7d0c6c8d383b5ef442f 653 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 373 392 1.0E-15 T 13-10-2018 P40_18600 a4b3d1dc310de7d0c6c8d383b5ef442f 653 Gene3D G3DSA:3.20.20.70 1 366 3.7E-128 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_21500 136f183a2bc3d4a9560e41d21b46d262 234 Gene3D G3DSA:3.40.50.300 1 234 1.2E-66 T 13-10-2018 P40_21500 136f183a2bc3d4a9560e41d21b46d262 234 SUPERFAMILY SSF52540 2 232 1.89E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_21500 136f183a2bc3d4a9560e41d21b46d262 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_21500 136f183a2bc3d4a9560e41d21b46d262 234 PIRSF PIRSF039137 1 234 1.8E-101 T 13-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 P40_21500 136f183a2bc3d4a9560e41d21b46d262 234 Pfam PF00005 ABC transporter 18 162 5.8E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_21500 136f183a2bc3d4a9560e41d21b46d262 234 SMART SM00382 26 217 5.3E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_15575 d545b89faeb901bea5d19493a55184a6 274 Pfam PF01694 Rhomboid family 132 266 1.1E-23 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 P40_15575 d545b89faeb901bea5d19493a55184a6 274 SUPERFAMILY SSF144091 90 272 7.06E-35 T 13-10-2018 P40_15575 d545b89faeb901bea5d19493a55184a6 274 Gene3D G3DSA:1.20.1540.10 90 266 8.3E-49 T 13-10-2018 IPR035952 Rhomboid-like superfamily P40_15575 d545b89faeb901bea5d19493a55184a6 274 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 71 5.5E-10 T 13-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 P40_09230 289a3a2a8554439cf5ef57168ab041fc 1167 Pfam PF02811 PHP domain 8 172 3.3E-44 T 13-10-2018 IPR004013 PHP domain GO:0003824 P40_09230 289a3a2a8554439cf5ef57168ab041fc 1167 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1042 0.0 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_09230 289a3a2a8554439cf5ef57168ab041fc 1167 Pfam PF14579 Helix-hairpin-helix motif 815 903 3.6E-26 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_09230 289a3a2a8554439cf5ef57168ab041fc 1167 Gene3D G3DSA:3.20.20.140 1 269 4.5E-94 T 13-10-2018 P40_09230 289a3a2a8554439cf5ef57168ab041fc 1167 SUPERFAMILY SSF89550 6 263 7.06E-15 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 P40_09230 289a3a2a8554439cf5ef57168ab041fc 1167 Pfam PF01336 OB-fold nucleic acid binding domain 1005 1082 3.7E-10 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 P40_09230 289a3a2a8554439cf5ef57168ab041fc 1167 Gene3D G3DSA:2.40.50.140 995 1084 3.4E-6 T 13-10-2018 P40_09230 289a3a2a8554439cf5ef57168ab041fc 1167 Gene3D G3DSA:1.10.10.1600 435 517 4.2E-27 T 13-10-2018 P40_09230 289a3a2a8554439cf5ef57168ab041fc 1167 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 742 1.7E-171 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_09230 289a3a2a8554439cf5ef57168ab041fc 1167 SMART SM00481 7 74 4.2E-24 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 Gene3D G3DSA:2.40.50.140 631 724 6.9E-30 T 13-10-2018 P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 SUPERFAMILY SSF158832 1 318 9.94E-120 T 13-10-2018 P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 Gene3D G3DSA:1.10.3500.10 111 498 2.8E-153 T 13-10-2018 IPR023323 Tex-like domain superfamily P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 Pfam PF16921 Tex protein YqgF-like domain 324 451 4.2E-51 T 13-10-2018 IPR032639 Tex protein, YqgF-like domain P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 SUPERFAMILY SSF47781 470 556 2.56E-26 T 13-10-2018 IPR010994 RuvA domain 2-like P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 SUPERFAMILY SSF47781 560 632 1.31E-19 T 13-10-2018 IPR010994 RuvA domain 2-like P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 SUPERFAMILY SSF50249 638 728 2.98E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 SMART SM00732 324 424 2.2E-33 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 Pfam PF12836 Helix-hairpin-helix motif 491 555 1.1E-26 T 13-10-2018 P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 Gene3D G3DSA:3.30.420.140 323 451 2.8E-153 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 Gene3D G3DSA:1.10.10.650 1 108 6.6E-43 T 13-10-2018 IPR023319 Tex-like protein, HTH domain superfamily P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 SMART SM00316 649 720 3.3E-27 T 13-10-2018 IPR022967 RNA-binding domain, S1 P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 Pfam PF00575 S1 RNA binding domain 649 720 6.6E-23 T 13-10-2018 IPR003029 S1 domain GO:0003676 P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 Pfam PF09371 Tex-like protein N-terminal domain 8 192 2.7E-71 T 13-10-2018 IPR018974 Tex-like protein, N-terminal P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 Gene3D G3DSA:1.10.150.310 499 630 7.5E-48 T 13-10-2018 P40_02325 55205ee44670ea174c0d9f5e8b5e083a 781 SUPERFAMILY SSF53098 320 469 4.1E-49 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_00310 248bc635c1e7f97ad4eb68102b213802 342 Gene3D G3DSA:3.60.15.10 61 336 2.0E-86 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_00310 248bc635c1e7f97ad4eb68102b213802 342 Pfam PF12706 Beta-lactamase superfamily domain 87 285 2.5E-41 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_00310 248bc635c1e7f97ad4eb68102b213802 342 PIRSF PIRSF038896 15 330 3.9E-113 T 13-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 P40_00310 248bc635c1e7f97ad4eb68102b213802 342 SUPERFAMILY SSF56281 53 290 1.44E-32 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_17170 f2be872ec0918c974d4b473d01c0a7a9 171 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 102 2.4E-10 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 P40_17170 f2be872ec0918c974d4b473d01c0a7a9 171 SUPERFAMILY SSF69118 7 163 3.88E-29 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 P40_17170 f2be872ec0918c974d4b473d01c0a7a9 171 Gene3D G3DSA:1.20.1290.10 1 165 5.4E-32 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 P40_19250 34b0318ab3298b89b9a9382e1282ec80 276 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 7 265 36.572 T 13-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 P40_19250 34b0318ab3298b89b9a9382e1282ec80 276 Gene3D G3DSA:3.40.50.1820 10 266 3.3E-60 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_19250 34b0318ab3298b89b9a9382e1282ec80 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 209 223 6.4E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_19250 34b0318ab3298b89b9a9382e1282ec80 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 6.4E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_19250 34b0318ab3298b89b9a9382e1282ec80 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 6.4E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_19250 34b0318ab3298b89b9a9382e1282ec80 276 SUPERFAMILY SSF53474 11 263 3.57E-50 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_19250 34b0318ab3298b89b9a9382e1282ec80 276 Pfam PF12697 Alpha/beta hydrolase family 24 258 5.4E-21 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_19250 34b0318ab3298b89b9a9382e1282ec80 276 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 22 263 3.3E-73 T 13-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 P40_08745 5729bfa4c666f597c2492d6e99fbf391 367 Pfam PF02371 Transposase IS116/IS110/IS902 family 230 310 4.9E-23 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_08745 5729bfa4c666f597c2492d6e99fbf391 367 Pfam PF01548 Transposase 22 162 1.6E-12 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_19925 5729bfa4c666f597c2492d6e99fbf391 367 Pfam PF02371 Transposase IS116/IS110/IS902 family 230 310 4.9E-23 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_19925 5729bfa4c666f597c2492d6e99fbf391 367 Pfam PF01548 Transposase 22 162 1.6E-12 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_10840 5729bfa4c666f597c2492d6e99fbf391 367 Pfam PF02371 Transposase IS116/IS110/IS902 family 230 310 4.9E-23 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_10840 5729bfa4c666f597c2492d6e99fbf391 367 Pfam PF01548 Transposase 22 162 1.6E-12 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_06625 5729bfa4c666f597c2492d6e99fbf391 367 Pfam PF02371 Transposase IS116/IS110/IS902 family 230 310 4.9E-23 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_06625 5729bfa4c666f597c2492d6e99fbf391 367 Pfam PF01548 Transposase 22 162 1.6E-12 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_14185 5729bfa4c666f597c2492d6e99fbf391 367 Pfam PF02371 Transposase IS116/IS110/IS902 family 230 310 4.9E-23 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_14185 5729bfa4c666f597c2492d6e99fbf391 367 Pfam PF01548 Transposase 22 162 1.6E-12 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_00805 5729bfa4c666f597c2492d6e99fbf391 367 Pfam PF02371 Transposase IS116/IS110/IS902 family 230 310 4.9E-23 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_00805 5729bfa4c666f597c2492d6e99fbf391 367 Pfam PF01548 Transposase 22 162 1.6E-12 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_04990 057abc8e5a4e0bae71b94dfd3f731b6d 420 Gene3D G3DSA:3.40.50.450 5 400 8.0E-156 T 13-10-2018 P40_04990 057abc8e5a4e0bae71b94dfd3f731b6d 420 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 399 44.56 T 13-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 P40_04990 057abc8e5a4e0bae71b94dfd3f731b6d 420 Pfam PF00365 Phosphofructokinase 10 323 3.7E-48 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 P40_04990 057abc8e5a4e0bae71b94dfd3f731b6d 420 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 237 249 1.4E-10 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 P40_04990 057abc8e5a4e0bae71b94dfd3f731b6d 420 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 179 195 1.4E-10 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 P40_04990 057abc8e5a4e0bae71b94dfd3f731b6d 420 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 137 154 1.4E-10 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 P40_04990 057abc8e5a4e0bae71b94dfd3f731b6d 420 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 1.4E-10 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 P40_04990 057abc8e5a4e0bae71b94dfd3f731b6d 420 SUPERFAMILY SSF53784 4 413 1.44E-108 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 P40_04990 057abc8e5a4e0bae71b94dfd3f731b6d 420 Gene3D G3DSA:3.40.50.460 142 387 8.0E-156 T 13-10-2018 P40_04990 057abc8e5a4e0bae71b94dfd3f731b6d 420 PIRSF PIRSF036483 2 418 2.6E-208 T 13-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 P40_01405 48168f01991bc26937467257506dd4f8 452 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 450 46.425 T 13-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 P40_01405 48168f01991bc26937467257506dd4f8 452 Pfam PF02347 Glycine cleavage system P-protein 3 442 5.2E-120 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 P40_01405 48168f01991bc26937467257506dd4f8 452 PIRSF PIRSF006815 1 451 1.1E-163 T 13-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 P40_01405 48168f01991bc26937467257506dd4f8 452 Gene3D G3DSA:3.40.640.10 80 353 3.2E-153 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_01405 48168f01991bc26937467257506dd4f8 452 SUPERFAMILY SSF53383 1 451 1.87E-112 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_01405 48168f01991bc26937467257506dd4f8 452 Gene3D G3DSA:3.90.1150.10 69 447 3.2E-153 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_15130 7508d6dab282c11aaf348aaf323fd081 125 Gene3D G3DSA:4.10.520.10 28 124 1.6E-20 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 P40_15130 7508d6dab282c11aaf348aaf323fd081 125 Pfam PF00216 Bacterial DNA-binding protein 28 123 7.5E-21 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_15130 7508d6dab282c11aaf348aaf323fd081 125 SMART SM00411 28 125 1.9E-10 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_15130 7508d6dab282c11aaf348aaf323fd081 125 SUPERFAMILY SSF47729 28 124 1.91E-17 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 P40_19875 3f1801ededc3dd8a07e5e0e4ccd68e3b 139 SUPERFAMILY SSF54637 8 135 1.16E-22 T 13-10-2018 IPR029069 HotDog domain superfamily P40_19875 3f1801ededc3dd8a07e5e0e4ccd68e3b 139 Gene3D G3DSA:3.10.129.10 3 136 4.2E-25 T 13-10-2018 P40_19875 3f1801ededc3dd8a07e5e0e4ccd68e3b 139 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 15 129 2.0E-11 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 P40_19875 3f1801ededc3dd8a07e5e0e4ccd68e3b 139 Pfam PF03061 Thioesterase superfamily 46 115 3.1E-11 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_14455 90101e5cdcbd0ed4222d7a1800068aa9 740 Pfam PF07715 TonB-dependent Receptor Plug Domain 142 234 7.9E-12 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_14455 90101e5cdcbd0ed4222d7a1800068aa9 740 Gene3D G3DSA:3.55.50.30 42 114 3.7E-23 T 13-10-2018 P40_14455 90101e5cdcbd0ed4222d7a1800068aa9 740 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 723 740 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site P40_14455 90101e5cdcbd0ed4222d7a1800068aa9 740 SMART SM00965 64 115 5.5E-10 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 P40_14455 90101e5cdcbd0ed4222d7a1800068aa9 740 SUPERFAMILY SSF56935 141 740 4.4E-54 T 13-10-2018 P40_14455 90101e5cdcbd0ed4222d7a1800068aa9 740 Pfam PF00593 TonB dependent receptor 340 738 1.4E-20 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_14455 90101e5cdcbd0ed4222d7a1800068aa9 740 Gene3D G3DSA:2.170.130.10 131 240 2.2E-32 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_14455 90101e5cdcbd0ed4222d7a1800068aa9 740 Gene3D G3DSA:2.40.170.20 241 740 1.7E-70 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_15070 c89d01f928822e1c6ded731edd521708 264 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 9 262 16.823 T 13-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 P40_15070 c89d01f928822e1c6ded731edd521708 264 Pfam PF13525 Outer membrane lipoprotein 139 262 1.3E-11 T 13-10-2018 IPR039565 Outer membrane lipoprotein BamD-like P40_15070 c89d01f928822e1c6ded731edd521708 264 Gene3D G3DSA:1.25.40.10 140 263 2.3E-29 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_15070 c89d01f928822e1c6ded731edd521708 264 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 141 257 2.6E-31 T 13-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal P40_15070 c89d01f928822e1c6ded731edd521708 264 Pfam PF16331 TolA binding protein trimerisation 58 114 2.2E-12 T 13-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 P40_15070 c89d01f928822e1c6ded731edd521708 264 SUPERFAMILY SSF48452 134 249 8.49E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_16885 fa56930511ba1abcc4e16d5b5096c427 163 Pfam PF04093 rod shape-determining protein MreD 10 153 4.0E-24 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 P40_16885 fa56930511ba1abcc4e16d5b5096c427 163 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 11 154 1.0E-32 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 P40_16885 fa56930511ba1abcc4e16d5b5096c427 163 PIRSF PIRSF018472 1 163 3.5E-51 T 13-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type P40_14570 1712b35c90de0a1c98c374d706fe4c0a 642 SUPERFAMILY SSF52540 21 378 1.3E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_14570 1712b35c90de0a1c98c374d706fe4c0a 642 SUPERFAMILY SSF52540 300 632 4.43E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_14570 1712b35c90de0a1c98c374d706fe4c0a 642 Gene3D G3DSA:3.40.50.300 128 370 1.6E-67 T 13-10-2018 P40_14570 1712b35c90de0a1c98c374d706fe4c0a 642 Gene3D G3DSA:3.40.50.300 501 621 4.4E-24 T 13-10-2018 P40_14570 1712b35c90de0a1c98c374d706fe4c0a 642 Gene3D G3DSA:3.40.50.300 383 500 1.2E-11 T 13-10-2018 P40_14570 1712b35c90de0a1c98c374d706fe4c0a 642 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 28 630 49.055 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 P40_14570 1712b35c90de0a1c98c374d706fe4c0a 642 Pfam PF13604 AAA domain 173 337 6.4E-31 T 13-10-2018 P40_14570 1712b35c90de0a1c98c374d706fe4c0a 642 Pfam PF13538 UvrD-like helicase C-terminal domain 559 605 4.8E-15 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain P40_14570 1712b35c90de0a1c98c374d706fe4c0a 642 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 19 632 5.3E-177 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 P40_14570 1712b35c90de0a1c98c374d706fe4c0a 642 Gene3D G3DSA:1.10.10.1020 13 127 1.1E-20 T 13-10-2018 P40_02060 6b54da271f588d19f220a60d07ffc7ff 284 SUPERFAMILY SSF53850 79 279 1.7E-41 T 13-10-2018 P40_02060 6b54da271f588d19f220a60d07ffc7ff 284 Gene3D G3DSA:3.40.190.10 89 275 1.3E-60 T 13-10-2018 P40_02060 6b54da271f588d19f220a60d07ffc7ff 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 53 3.7E-11 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_02060 6b54da271f588d19f220a60d07ffc7ff 284 Gene3D G3DSA:3.40.190.10 149 248 1.3E-60 T 13-10-2018 P40_02060 6b54da271f588d19f220a60d07ffc7ff 284 SUPERFAMILY SSF46785 15 100 3.13E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_02060 6b54da271f588d19f220a60d07ffc7ff 284 Pfam PF03466 LysR substrate binding domain 78 279 4.6E-40 T 13-10-2018 IPR005119 LysR, substrate-binding P40_02060 6b54da271f588d19f220a60d07ffc7ff 284 Gene3D G3DSA:1.10.10.10 13 82 7.3E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_09650 f3d101f270ac76ea2e1068522b34ed5e 276 Pfam PF13452 N-terminal half of MaoC dehydratase 74 135 2.9E-7 T 13-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 P40_09650 f3d101f270ac76ea2e1068522b34ed5e 276 Gene3D G3DSA:3.10.129.10 39 150 5.4E-10 T 13-10-2018 P40_09650 f3d101f270ac76ea2e1068522b34ed5e 276 Gene3D G3DSA:3.10.129.10 151 273 5.6E-12 T 13-10-2018 P40_09650 f3d101f270ac76ea2e1068522b34ed5e 276 SUPERFAMILY SSF54637 37 135 1.94E-5 T 13-10-2018 IPR029069 HotDog domain superfamily P40_09650 f3d101f270ac76ea2e1068522b34ed5e 276 SUPERFAMILY SSF54637 161 251 8.95E-13 T 13-10-2018 IPR029069 HotDog domain superfamily P40_15220 ddb36bff681945cbed73a806b32dc372 635 SUPERFAMILY SSF56801 3 622 1.31E-153 T 13-10-2018 P40_15220 ddb36bff681945cbed73a806b32dc372 635 ProSitePatterns PS00455 Putative AMP-binding domain signature. 236 247 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_15220 ddb36bff681945cbed73a806b32dc372 635 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 588 1.6E-21 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_15220 ddb36bff681945cbed73a806b32dc372 635 Gene3D G3DSA:3.30.300.30 496 624 2.5E-23 T 13-10-2018 P40_15220 ddb36bff681945cbed73a806b32dc372 635 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 56 2.1E-15 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 P40_15220 ddb36bff681945cbed73a806b32dc372 635 Gene3D G3DSA:3.40.50.12780 35 493 1.4E-100 T 13-10-2018 P40_15220 ddb36bff681945cbed73a806b32dc372 635 Pfam PF00501 AMP-binding enzyme 61 500 1.3E-84 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_00280 8696cf773e563cf341f7b7884efe3c00 400 SUPERFAMILY SSF103473 13 395 3.92E-48 T 13-10-2018 IPR036259 MFS transporter superfamily P40_00280 8696cf773e563cf341f7b7884efe3c00 400 Gene3D G3DSA:1.20.1250.20 14 396 3.9E-41 T 13-10-2018 P40_00280 8696cf773e563cf341f7b7884efe3c00 400 Pfam PF07690 Major Facilitator Superfamily 24 350 1.3E-25 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_09430 e45ad2abe3aad4fbe3e7279572177abe 90 PRINTS PR00050 Cold shock protein signature 4 19 2.1E-14 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 P40_09430 e45ad2abe3aad4fbe3e7279572177abe 90 PRINTS PR00050 Cold shock protein signature 25 34 2.1E-14 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 P40_09430 e45ad2abe3aad4fbe3e7279572177abe 90 PRINTS PR00050 Cold shock protein signature 40 58 2.1E-14 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 P40_09430 e45ad2abe3aad4fbe3e7279572177abe 90 SUPERFAMILY SSF50249 1 65 2.79E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_09430 e45ad2abe3aad4fbe3e7279572177abe 90 SMART SM00357 3 67 5.5E-22 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 P40_09430 e45ad2abe3aad4fbe3e7279572177abe 90 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 9.5E-25 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 P40_09430 e45ad2abe3aad4fbe3e7279572177abe 90 Gene3D G3DSA:2.40.50.140 1 65 3.2E-25 T 13-10-2018 P40_15410 ead3f8ed360e4af404966406a2d92d38 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 277 3.2E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_15410 ead3f8ed360e4af404966406a2d92d38 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 277 293 3.2E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_15410 ead3f8ed360e4af404966406a2d92d38 299 Pfam PF12833 Helix-turn-helix domain 216 294 1.2E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_15410 ead3f8ed360e4af404966406a2d92d38 299 Gene3D G3DSA:1.10.10.60 191 298 2.6E-26 T 13-10-2018 P40_15410 ead3f8ed360e4af404966406a2d92d38 299 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 7 294 3.8E-121 T 13-10-2018 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA P40_15410 ead3f8ed360e4af404966406a2d92d38 299 SUPERFAMILY SSF51182 38 129 1.42E-9 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_15410 ead3f8ed360e4af404966406a2d92d38 299 Pfam PF02311 AraC-like ligand binding domain 35 149 3.3E-10 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 P40_15410 ead3f8ed360e4af404966406a2d92d38 299 Gene3D G3DSA:2.60.120.10 33 103 1.1E-6 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_15410 ead3f8ed360e4af404966406a2d92d38 299 SMART SM00342 210 293 1.2E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_15410 ead3f8ed360e4af404966406a2d92d38 299 SUPERFAMILY SSF46689 248 295 1.84E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_09115 4971239764876be9899fb3942a073176 270 SUPERFAMILY SSF103481 35 132 1.19E-10 T 13-10-2018 P40_09115 4971239764876be9899fb3942a073176 270 SUPERFAMILY SSF103481 172 268 2.48E-15 T 13-10-2018 P40_09115 4971239764876be9899fb3942a073176 270 Pfam PF00892 EamA-like transporter family 137 267 3.0E-15 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_09115 4971239764876be9899fb3942a073176 270 Pfam PF00892 EamA-like transporter family 14 128 6.6E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_02385 5cc9d426435962765066b022aef1f30b 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.4E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02385 5cc9d426435962765066b022aef1f30b 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.4E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02385 5cc9d426435962765066b022aef1f30b 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.4E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02385 5cc9d426435962765066b022aef1f30b 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_02385 5cc9d426435962765066b022aef1f30b 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 5.8E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02385 5cc9d426435962765066b022aef1f30b 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 5.8E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02385 5cc9d426435962765066b022aef1f30b 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.8E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02385 5cc9d426435962765066b022aef1f30b 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 5.8E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02385 5cc9d426435962765066b022aef1f30b 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.8E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02385 5cc9d426435962765066b022aef1f30b 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 5.8E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02385 5cc9d426435962765066b022aef1f30b 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 261 2.9E-66 T 13-10-2018 P40_02385 5cc9d426435962765066b022aef1f30b 263 SUPERFAMILY SSF51735 8 262 5.16E-79 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_02385 5cc9d426435962765066b022aef1f30b 263 Gene3D G3DSA:3.40.50.720 1 262 1.9E-82 T 13-10-2018 P40_02385 5cc9d426435962765066b022aef1f30b 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 195 0.0071 T 13-10-2018 P40_17065 709d9c42553f2106690db1df5cfce107 186 Pfam PF03550 Outer membrane lipoprotein LolB 33 182 5.3E-38 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 P40_17065 709d9c42553f2106690db1df5cfce107 186 SUPERFAMILY SSF89392 16 183 1.26E-34 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX P40_17065 709d9c42553f2106690db1df5cfce107 186 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 30 183 7.7E-25 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 P40_17065 709d9c42553f2106690db1df5cfce107 186 Gene3D G3DSA:2.50.20.10 15 183 2.2E-39 T 13-10-2018 P40_19665 2c0dde8457b0da24c3b70e1fb6d3da78 457 TIGRFAM TIGR01679 bact_FAD_ox: FAD-linked oxidoreductase 37 450 1.6E-126 T 13-10-2018 P40_19665 2c0dde8457b0da24c3b70e1fb6d3da78 457 Pfam PF04030 D-arabinono-1,4-lactone oxidase 202 448 5.4E-55 T 13-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 P40_19665 2c0dde8457b0da24c3b70e1fb6d3da78 457 PIRSF PIRSF000136 28 453 1.3E-74 T 13-10-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 P40_19665 2c0dde8457b0da24c3b70e1fb6d3da78 457 Gene3D G3DSA:3.30.43.10 31 97 2.2E-17 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 P40_19665 2c0dde8457b0da24c3b70e1fb6d3da78 457 Pfam PF01565 FAD binding domain 68 178 5.7E-16 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 P40_19665 2c0dde8457b0da24c3b70e1fb6d3da78 457 SUPERFAMILY SSF56176 33 208 6.54E-35 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 P40_19665 2c0dde8457b0da24c3b70e1fb6d3da78 457 Gene3D G3DSA:3.30.465.10 101 219 4.4E-30 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 P40_19665 2c0dde8457b0da24c3b70e1fb6d3da78 457 Gene3D G3DSA:3.30.70.2520 320 412 6.4E-23 T 13-10-2018 P40_19665 2c0dde8457b0da24c3b70e1fb6d3da78 457 Gene3D G3DSA:1.10.45.10 413 450 8.4E-9 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 P40_10920 1d82e78aea07447cd75088f097b4b1af 458 Gene3D G3DSA:3.40.50.1220 274 457 3.3E-80 T 13-10-2018 P40_10920 1d82e78aea07447cd75088f097b4b1af 458 PIRSF PIRSF000204 1 457 1.1E-178 T 13-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 P40_10920 1d82e78aea07447cd75088f097b4b1af 458 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 452 4.4E-183 T 13-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 P40_10920 1d82e78aea07447cd75088f097b4b1af 458 SUPERFAMILY SSF52467 282 457 2.34E-69 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily P40_10670 d58cf5b92633d0ca5b70eaaca7ccaf3e 143 Pfam PF02501 Type II secretion system (T2SS), protein I 41 117 5.7E-16 T 13-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 P40_10670 d58cf5b92633d0ca5b70eaaca7ccaf3e 143 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 101 1.5E-14 T 13-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 P40_10670 d58cf5b92633d0ca5b70eaaca7ccaf3e 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_10670 d58cf5b92633d0ca5b70eaaca7ccaf3e 143 Gene3D G3DSA:3.30.1300.30 36 121 1.7E-14 T 13-10-2018 P40_10670 d58cf5b92633d0ca5b70eaaca7ccaf3e 143 SUPERFAMILY SSF54523 39 120 3.66E-14 T 13-10-2018 P40_10670 d58cf5b92633d0ca5b70eaaca7ccaf3e 143 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.3E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_10670 d58cf5b92633d0ca5b70eaaca7ccaf3e 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 2.8E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_14310 81ed6663a33a9bec30f597c185cb8ef7 756 Gene3D G3DSA:1.20.210.10 221 749 2.0E-167 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_14310 81ed6663a33a9bec30f597c185cb8ef7 756 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 281 724 2.2E-68 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_14310 81ed6663a33a9bec30f597c185cb8ef7 756 SUPERFAMILY SSF81442 275 748 1.57E-78 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05740 54b957568572270b57e8f299f8bdcbb2 284 Gene3D G3DSA:3.40.50.2300 112 242 5.6E-15 T 13-10-2018 P40_08505 0b0bd1e4d52f9550f572e1c94abbc08c 149 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 26 135 3.7E-35 T 13-10-2018 IPR008769 Poly granule associated P40_08505 0b0bd1e4d52f9550f572e1c94abbc08c 149 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 29 135 2.4E-31 T 13-10-2018 IPR008769 Poly granule associated P40_09030 3663f21ebc06a862ad24ae7fc71f1e0f 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 2.7E-20 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain P40_09030 3663f21ebc06a862ad24ae7fc71f1e0f 270 SUPERFAMILY SSF52540 2 268 3.64E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_09030 3663f21ebc06a862ad24ae7fc71f1e0f 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 267 7.5E-107 T 13-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 P40_09030 3663f21ebc06a862ad24ae7fc71f1e0f 270 PIRSF PIRSF003092 1 270 1.2E-89 T 13-10-2018 IPR025501 ATP binding protein MinD P40_09030 3663f21ebc06a862ad24ae7fc71f1e0f 270 Gene3D G3DSA:3.40.50.300 1 260 3.4E-67 T 13-10-2018 P40_04710 b23a4f82659aa66ecd3c1c25dce8efe1 153 Pfam PF01638 HxlR-like helix-turn-helix 20 105 7.0E-19 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type P40_04710 b23a4f82659aa66ecd3c1c25dce8efe1 153 SUPERFAMILY SSF46785 6 141 2.73E-34 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_04710 b23a4f82659aa66ecd3c1c25dce8efe1 153 Gene3D G3DSA:1.10.10.10 1 152 8.3E-42 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_07525 8e18f4faa22da7e8ad7bc5673f30bec2 152 SUPERFAMILY SSF54427 25 139 1.41E-7 T 13-10-2018 IPR032710 NTF2-like domain superfamily P40_07525 8e18f4faa22da7e8ad7bc5673f30bec2 152 Gene3D G3DSA:3.10.450.50 21 144 7.4E-6 T 13-10-2018 P40_21510 245b174e5d41ebfc43c282474fbc8072 326 Gene3D G3DSA:3.40.50.80 111 228 1.3E-25 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_21510 245b174e5d41ebfc43c282474fbc8072 326 SUPERFAMILY SSF54292 220 326 2.62E-27 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 P40_21510 245b174e5d41ebfc43c282474fbc8072 326 SUPERFAMILY SSF52343 107 233 4.71E-28 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_21510 245b174e5d41ebfc43c282474fbc8072 326 Gene3D G3DSA:3.10.20.30 231 326 5.0E-26 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_21510 245b174e5d41ebfc43c282474fbc8072 326 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 275 283 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 P40_21510 245b174e5d41ebfc43c282474fbc8072 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 39 49 2.3E-38 T 13-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 P40_21510 245b174e5d41ebfc43c282474fbc8072 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 49 61 2.3E-38 T 13-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 P40_21510 245b174e5d41ebfc43c282474fbc8072 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 61 75 2.3E-38 T 13-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 P40_21510 245b174e5d41ebfc43c282474fbc8072 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 146 155 2.3E-38 T 13-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 P40_21510 245b174e5d41ebfc43c282474fbc8072 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 2.3E-38 T 13-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 P40_21510 245b174e5d41ebfc43c282474fbc8072 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 99 113 2.3E-38 T 13-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 P40_21510 245b174e5d41ebfc43c282474fbc8072 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 85 99 2.3E-38 T 13-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 P40_21510 245b174e5d41ebfc43c282474fbc8072 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 121 140 2.3E-38 T 13-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 P40_21510 245b174e5d41ebfc43c282474fbc8072 326 Gene3D G3DSA:2.40.30.10 8 110 9.7E-23 T 13-10-2018 P40_21510 245b174e5d41ebfc43c282474fbc8072 326 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 245 314 2.1E-12 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 P40_21510 245b174e5d41ebfc43c282474fbc8072 326 Pfam PF00175 Oxidoreductase NAD-binding domain 122 209 4.3E-5 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 P40_21510 245b174e5d41ebfc43c282474fbc8072 326 SUPERFAMILY SSF63380 11 109 6.54E-23 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel P40_10655 da8c386bf4751c43912d3c7d88f77d01 406 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 3.8E-150 T 13-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 P40_10655 da8c386bf4751c43912d3c7d88f77d01 406 Gene3D G3DSA:1.20.81.30 257 368 5.7E-28 T 13-10-2018 P40_10655 da8c386bf4751c43912d3c7d88f77d01 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 8.2E-27 T 13-10-2018 IPR003004 GspF/PilC family P40_10655 da8c386bf4751c43912d3c7d88f77d01 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 8.2E-27 T 13-10-2018 IPR003004 GspF/PilC family P40_10655 da8c386bf4751c43912d3c7d88f77d01 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 8.2E-27 T 13-10-2018 IPR003004 GspF/PilC family P40_10655 da8c386bf4751c43912d3c7d88f77d01 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 8.2E-27 T 13-10-2018 IPR003004 GspF/PilC family P40_10655 da8c386bf4751c43912d3c7d88f77d01 406 Gene3D G3DSA:1.20.81.30 60 173 3.9E-30 T 13-10-2018 P40_10655 da8c386bf4751c43912d3c7d88f77d01 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 1.8E-30 T 13-10-2018 IPR018076 Type II secretion system F domain P40_10655 da8c386bf4751c43912d3c7d88f77d01 406 Pfam PF00482 Type II secretion system (T2SS), protein F 276 396 1.5E-30 T 13-10-2018 IPR018076 Type II secretion system F domain P40_13465 bff2503ccd442cbf09f58984f17ab037 397 SUPERFAMILY SSF56645 7 244 6.81E-70 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_13465 bff2503ccd442cbf09f58984f17ab037 397 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 4.1E-19 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_13465 bff2503ccd442cbf09f58984f17ab037 397 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 211 6.8E-19 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_13465 bff2503ccd442cbf09f58984f17ab037 397 Gene3D G3DSA:1.20.140.10 235 397 6.2E-23 T 13-10-2018 P40_13465 bff2503ccd442cbf09f58984f17ab037 397 SUPERFAMILY SSF47203 231 396 9.14E-11 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_13465 bff2503ccd442cbf09f58984f17ab037 397 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 395 3.2E-14 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_13465 bff2503ccd442cbf09f58984f17ab037 397 Gene3D G3DSA:2.40.110.10 125 234 8.3E-35 T 13-10-2018 P40_13465 bff2503ccd442cbf09f58984f17ab037 397 Gene3D G3DSA:1.10.540.10 5 119 4.1E-27 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_19095 4cc06dfeadb47d96ec8a1ac1c33bc84c 263 Gene3D G3DSA:1.10.3720.10 65 255 2.8E-27 T 13-10-2018 IPR035906 MetI-like superfamily P40_19095 4cc06dfeadb47d96ec8a1ac1c33bc84c 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 251 2.3E-25 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_19095 4cc06dfeadb47d96ec8a1ac1c33bc84c 263 SUPERFAMILY SSF161098 64 247 1.18E-32 T 13-10-2018 IPR035906 MetI-like superfamily P40_13670 f8dff7d9e4ce10d30a13d3d99a838a4c 647 Gene3D G3DSA:1.10.1240.20 390 459 6.6E-18 T 13-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 P40_13670 f8dff7d9e4ce10d30a13d3d99a838a4c 647 Gene3D G3DSA:1.25.20.10 23 379 8.6E-90 T 13-10-2018 P40_13670 f8dff7d9e4ce10d30a13d3d99a838a4c 647 SUPERFAMILY SSF48435 26 464 3.79E-106 T 13-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 P40_13670 f8dff7d9e4ce10d30a13d3d99a838a4c 647 SUPERFAMILY SSF53955 430 611 2.97E-48 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily P40_13670 f8dff7d9e4ce10d30a13d3d99a838a4c 647 Pfam PF01464 Transglycosylase SLT domain 472 579 5.8E-31 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 P40_13670 f8dff7d9e4ce10d30a13d3d99a838a4c 647 Gene3D G3DSA:1.10.530.10 461 625 1.4E-49 T 13-10-2018 P40_13670 f8dff7d9e4ce10d30a13d3d99a838a4c 647 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 488 516 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 P40_13670 f8dff7d9e4ce10d30a13d3d99a838a4c 647 Pfam PF14718 Soluble lytic murein transglycosylase L domain 397 459 4.3E-18 T 13-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 P40_09455 a0f0cdf48c7a45db83a1c0e7f9491bb5 666 Gene3D G3DSA:3.40.50.12780 71 521 6.7E-55 T 13-10-2018 P40_09455 a0f0cdf48c7a45db83a1c0e7f9491bb5 666 SUPERFAMILY SSF56801 24 644 2.09E-124 T 13-10-2018 P40_09455 a0f0cdf48c7a45db83a1c0e7f9491bb5 666 Pfam PF00501 AMP-binding enzyme 103 526 3.3E-45 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_09455 a0f0cdf48c7a45db83a1c0e7f9491bb5 666 ProSitePatterns PS00455 Putative AMP-binding domain signature. 270 281 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_09455 a0f0cdf48c7a45db83a1c0e7f9491bb5 666 Gene3D G3DSA:3.30.300.30 524 648 3.2E-12 T 13-10-2018 P40_09455 a0f0cdf48c7a45db83a1c0e7f9491bb5 666 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 7 655 6.4E-249 T 13-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 P40_09455 a0f0cdf48c7a45db83a1c0e7f9491bb5 666 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 41 94 2.8E-12 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 P40_13490 c7b62ca787084dfbd4623f5010431c63 701 SUPERFAMILY SSF56059 487 699 1.68E-34 T 13-10-2018 P40_13490 c7b62ca787084dfbd4623f5010431c63 701 SUPERFAMILY SSF52210 309 465 1.06E-24 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_13490 c7b62ca787084dfbd4623f5010431c63 701 Pfam PF13380 CoA binding domain 19 144 2.9E-23 T 13-10-2018 IPR003781 CoA-binding GO:0048037 P40_13490 c7b62ca787084dfbd4623f5010431c63 701 SUPERFAMILY SSF52210 141 302 1.09E-41 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_13490 c7b62ca787084dfbd4623f5010431c63 701 Gene3D G3DSA:3.30.1490.20 504 581 1.5E-70 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_13490 c7b62ca787084dfbd4623f5010431c63 701 SUPERFAMILY SSF51735 7 146 1.77E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_13490 c7b62ca787084dfbd4623f5010431c63 701 Pfam PF13549 ATP-grasp domain 486 698 7.0E-63 T 13-10-2018 P40_13490 c7b62ca787084dfbd4623f5010431c63 701 Gene3D G3DSA:3.40.50.261 140 306 1.7E-55 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_13490 c7b62ca787084dfbd4623f5010431c63 701 SMART SM00881 15 110 4.4E-32 T 13-10-2018 IPR003781 CoA-binding GO:0048037 P40_13490 c7b62ca787084dfbd4623f5010431c63 701 Gene3D G3DSA:3.40.50.261 308 471 2.9E-30 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_13490 c7b62ca787084dfbd4623f5010431c63 701 Gene3D G3DSA:3.30.470.20 486 698 1.5E-70 T 13-10-2018 P40_13490 c7b62ca787084dfbd4623f5010431c63 701 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 165 302 7.8E-50 T 13-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain P40_13490 c7b62ca787084dfbd4623f5010431c63 701 Gene3D G3DSA:3.40.50.720 9 139 1.8E-40 T 13-10-2018 P40_08415 348479eafe0000c1e6dfbddb9452e2bd 192 SUPERFAMILY SSF53955 21 170 1.53E-20 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily P40_08415 348479eafe0000c1e6dfbddb9452e2bd 192 Gene3D G3DSA:1.10.530.10 37 190 5.8E-15 T 13-10-2018 P40_14985 80c18a89e3e7c937cca8cf57c92d4d75 230 SMART SM00345 13 71 1.2E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_14985 80c18a89e3e7c937cca8cf57c92d4d75 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 9.2E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_14985 80c18a89e3e7c937cca8cf57c92d4d75 230 Gene3D G3DSA:1.20.120.530 76 217 6.0E-12 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_14985 80c18a89e3e7c937cca8cf57c92d4d75 230 Gene3D G3DSA:1.10.10.10 2 72 6.7E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14985 80c18a89e3e7c937cca8cf57c92d4d75 230 Pfam PF07729 FCD domain 82 203 6.2E-12 T 13-10-2018 IPR011711 GntR, C-terminal P40_14985 80c18a89e3e7c937cca8cf57c92d4d75 230 SUPERFAMILY SSF46785 4 75 3.12E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_14985 80c18a89e3e7c937cca8cf57c92d4d75 230 SMART SM00895 81 206 4.1E-4 T 13-10-2018 IPR011711 GntR, C-terminal P40_14985 80c18a89e3e7c937cca8cf57c92d4d75 230 SUPERFAMILY SSF48008 79 210 4.97E-10 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_14270 e432a162a879cecd103a4d35bc013189 125 PIRSF PIRSF037181 1 125 2.5E-44 T 13-10-2018 IPR014958 DGC P40_14270 e432a162a879cecd103a4d35bc013189 125 Pfam PF08859 DGC domain 11 116 1.1E-33 T 13-10-2018 IPR014958 DGC P40_12560 fe6c0c7dff7a610f569f4235c08db12e 169 SUPERFAMILY SSF49772 34 168 1.83E-49 T 13-10-2018 IPR036198 Ecotin superfamily P40_12560 fe6c0c7dff7a610f569f4235c08db12e 169 Pfam PF03974 Ecotin 38 159 2.2E-47 T 13-10-2018 IPR005658 Proteinase inhibitor I11, ecotin P40_12560 fe6c0c7dff7a610f569f4235c08db12e 169 PIRSF PIRSF006865 10 169 4.9E-52 T 13-10-2018 IPR005658 Proteinase inhibitor I11, ecotin P40_12560 fe6c0c7dff7a610f569f4235c08db12e 169 Gene3D G3DSA:2.60.40.550 29 168 1.3E-53 T 13-10-2018 P40_20415 299ef4579bcc758cb6aeabde59d28e3f 229 Pfam PF00072 Response regulator receiver domain 6 112 3.5E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_20415 299ef4579bcc758cb6aeabde59d28e3f 229 SUPERFAMILY SSF52172 2 119 6.83E-31 T 13-10-2018 IPR011006 CheY-like superfamily P40_20415 299ef4579bcc758cb6aeabde59d28e3f 229 SMART SM00862 148 224 1.2E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_20415 299ef4579bcc758cb6aeabde59d28e3f 229 Gene3D G3DSA:3.40.50.2300 1 117 8.4E-29 T 13-10-2018 P40_20415 299ef4579bcc758cb6aeabde59d28e3f 229 Gene3D G3DSA:1.10.10.10 118 228 1.1E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_20415 299ef4579bcc758cb6aeabde59d28e3f 229 SUPERFAMILY SSF46894 126 225 1.43E-26 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_20415 299ef4579bcc758cb6aeabde59d28e3f 229 SMART SM00448 1 112 2.6E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_20415 299ef4579bcc758cb6aeabde59d28e3f 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 2.8E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_15580 2fb08061be66f0b7374c34911b20b8c7 347 Pfam PF10023 Putative aminopeptidase 24 340 8.0E-117 T 13-10-2018 IPR014553 Predicted aminopeptidase P40_15580 2fb08061be66f0b7374c34911b20b8c7 347 PIRSF PIRSF029285 1 343 2.9E-99 T 13-10-2018 IPR014553 Predicted aminopeptidase P40_09965 0858e3b4837130e21ca2d2ae88d5299b 158 SUPERFAMILY SSF102712 59 128 4.45E-5 T 13-10-2018 P40_09965 0858e3b4837130e21ca2d2ae88d5299b 158 Gene3D G3DSA:3.40.140.10 35 158 3.3E-43 T 13-10-2018 P40_09965 0858e3b4837130e21ca2d2ae88d5299b 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site P40_09965 0858e3b4837130e21ca2d2ae88d5299b 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 22 158 2.9E-44 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 P40_09965 0858e3b4837130e21ca2d2ae88d5299b 158 Pfam PF04002 RadC-like JAB domain 38 156 4.3E-43 T 13-10-2018 IPR025657 RadC-like JAB domain P40_02715 ac72a5100ff24871935e898cc59e4a78 102 Gene3D G3DSA:3.40.630.30 3 99 1.3E-8 T 13-10-2018 P40_02715 ac72a5100ff24871935e898cc59e4a78 102 SUPERFAMILY SSF55729 20 87 3.3E-10 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_02715 ac72a5100ff24871935e898cc59e4a78 102 Pfam PF12568 Acetyltransferase (GNAT) domain 12 81 4.6E-5 T 13-10-2018 IPR000182 GNAT domain P40_14340 992c89695553b5be13762a056cf4dc0b 135 SMART SM00860 16 109 3.8E-4 T 13-10-2018 IPR018958 Knr4/Smi1-like domain P40_14340 992c89695553b5be13762a056cf4dc0b 135 SUPERFAMILY SSF160631 8 125 4.84E-15 T 13-10-2018 P40_14340 992c89695553b5be13762a056cf4dc0b 135 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 16 122 9.2E-7 T 13-10-2018 IPR018958 Knr4/Smi1-like domain P40_14340 992c89695553b5be13762a056cf4dc0b 135 Gene3D G3DSA:3.40.1580.10 4 129 1.2E-18 T 13-10-2018 IPR037883 Knr4/Smi1-like domain superfamily P40_05700 ad73688c93a8dbb5577ec53ac84473ff 257 Pfam PF13424 Tetratricopeptide repeat 103 169 1.8E-10 T 13-10-2018 P40_05700 ad73688c93a8dbb5577ec53ac84473ff 257 SMART SM00028 139 172 1.1E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_05700 ad73688c93a8dbb5577ec53ac84473ff 257 SMART SM00028 69 102 0.061 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_05700 ad73688c93a8dbb5577ec53ac84473ff 257 SMART SM00028 35 68 0.33 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_05700 ad73688c93a8dbb5577ec53ac84473ff 257 SMART SM00028 103 135 65.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_05700 ad73688c93a8dbb5577ec53ac84473ff 257 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 11 236 1.8E-58 T 13-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW P40_05700 ad73688c93a8dbb5577ec53ac84473ff 257 Pfam PF07719 Tetratricopeptide repeat 41 67 4.7E-5 T 13-10-2018 IPR013105 Tetratricopeptide repeat 2 P40_05700 ad73688c93a8dbb5577ec53ac84473ff 257 SUPERFAMILY SSF48452 39 199 1.78E-27 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_05700 ad73688c93a8dbb5577ec53ac84473ff 257 Gene3D G3DSA:1.25.40.10 34 250 1.8E-49 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_18625 88363dc6b6e6a6aaf0824f216e5536be 246 Gene3D G3DSA:1.10.10.10 5 81 5.3E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_18625 88363dc6b6e6a6aaf0824f216e5536be 246 SMART SM00895 103 225 4.6E-21 T 13-10-2018 IPR011711 GntR, C-terminal P40_18625 88363dc6b6e6a6aaf0824f216e5536be 246 SUPERFAMILY SSF48008 101 228 2.41E-23 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_18625 88363dc6b6e6a6aaf0824f216e5536be 246 Gene3D G3DSA:1.20.120.530 100 233 3.3E-22 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_18625 88363dc6b6e6a6aaf0824f216e5536be 246 SMART SM00345 20 78 1.4E-11 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_18625 88363dc6b6e6a6aaf0824f216e5536be 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 74 7.1E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_18625 88363dc6b6e6a6aaf0824f216e5536be 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 2.4E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_18625 88363dc6b6e6a6aaf0824f216e5536be 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 2.4E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_18625 88363dc6b6e6a6aaf0824f216e5536be 246 Pfam PF07729 FCD domain 104 223 1.1E-21 T 13-10-2018 IPR011711 GntR, C-terminal P40_18625 88363dc6b6e6a6aaf0824f216e5536be 246 SUPERFAMILY SSF46785 12 82 8.18E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_20095 6cf080e8f6fcbf8843e4208ced46135f 299 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 278 4.2E-22 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_20095 6cf080e8f6fcbf8843e4208ced46135f 299 Gene3D G3DSA:3.50.50.60 114 221 1.7E-94 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_20095 6cf080e8f6fcbf8843e4208ced46135f 299 Gene3D G3DSA:3.50.50.60 2 286 1.7E-94 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_20095 6cf080e8f6fcbf8843e4208ced46135f 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 9.2E-14 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_20095 6cf080e8f6fcbf8843e4208ced46135f 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 123 135 9.2E-14 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_20095 6cf080e8f6fcbf8843e4208ced46135f 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 9.2E-14 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_20095 6cf080e8f6fcbf8843e4208ced46135f 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 255 273 9.2E-14 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_20095 6cf080e8f6fcbf8843e4208ced46135f 299 SUPERFAMILY SSF51905 2 291 7.21E-31 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_20095 6cf080e8f6fcbf8843e4208ced46135f 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 7.9E-14 T 13-10-2018 P40_20095 6cf080e8f6fcbf8843e4208ced46135f 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 245 267 7.9E-14 T 13-10-2018 P40_20095 6cf080e8f6fcbf8843e4208ced46135f 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 7.9E-14 T 13-10-2018 P40_20095 6cf080e8f6fcbf8843e4208ced46135f 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 7.9E-14 T 13-10-2018 P40_00850 9adb7a540dfabb17f8f0e3656e833fe6 151 SUPERFAMILY SSF54637 18 151 2.42E-16 T 13-10-2018 IPR029069 HotDog domain superfamily P40_00850 9adb7a540dfabb17f8f0e3656e833fe6 151 Pfam PF13452 N-terminal half of MaoC dehydratase 11 143 7.3E-22 T 13-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 P40_00850 9adb7a540dfabb17f8f0e3656e833fe6 151 Gene3D G3DSA:3.10.129.10 8 151 2.8E-22 T 13-10-2018 P40_01700 2c9e52c70d6b5cf3480ed47bb76466bf 428 PIRSF PIRSF006066 1 428 1.6E-96 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_01700 2c9e52c70d6b5cf3480ed47bb76466bf 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 419 1.3E-90 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_01700 2c9e52c70d6b5cf3480ed47bb76466bf 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 424 1.8E-99 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_04470 0be5f9f0ed4ff290378d67e06facbbc4 1506 Pfam PF09992 Phosphodiester glycosidase 320 455 2.3E-25 T 13-10-2018 IPR018711 Phosphodiester glycosidase P40_04470 0be5f9f0ed4ff290378d67e06facbbc4 1506 Pfam PF00149 Calcineurin-like phosphoesterase 1228 1422 6.8E-15 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 P40_04470 0be5f9f0ed4ff290378d67e06facbbc4 1506 SUPERFAMILY SSF49363 1120 1217 1.24E-17 T 13-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 P40_04470 0be5f9f0ed4ff290378d67e06facbbc4 1506 Gene3D G3DSA:3.60.21.10 1221 1501 2.3E-34 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like P40_04470 0be5f9f0ed4ff290378d67e06facbbc4 1506 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 1124 1217 1.1E-16 T 13-10-2018 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 P40_04470 0be5f9f0ed4ff290378d67e06facbbc4 1506 SUPERFAMILY SSF49384 909 1015 4.19E-5 T 13-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 P40_04470 0be5f9f0ed4ff290378d67e06facbbc4 1506 Gene3D G3DSA:2.60.40.380 1123 1219 1.3E-12 T 13-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 P40_04470 0be5f9f0ed4ff290378d67e06facbbc4 1506 SUPERFAMILY SSF56300 1225 1501 2.31E-39 T 13-10-2018 P40_19530 c5cf533cd774756d8e76ffc215e9294c 160 Pfam PF04073 Aminoacyl-tRNA editing domain 25 141 7.4E-26 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 P40_19530 c5cf533cd774756d8e76ffc215e9294c 160 Gene3D G3DSA:3.90.960.10 1 154 4.3E-45 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 P40_19530 c5cf533cd774756d8e76ffc215e9294c 160 SUPERFAMILY SSF55826 5 152 1.44E-39 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 P40_06555 e647f5754497a07746349dbf65c7ab6e 419 Pfam PF03471 Transporter associated domain 343 418 1.4E-16 T 13-10-2018 IPR005170 Transporter-associated domain P40_06555 e647f5754497a07746349dbf65c7ab6e 419 SUPERFAMILY SSF56176 338 417 1.12E-18 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 P40_06555 e647f5754497a07746349dbf65c7ab6e 419 SUPERFAMILY SSF54631 192 328 3.05E-29 T 13-10-2018 P40_06555 e647f5754497a07746349dbf65c7ab6e 419 Pfam PF00571 CBS domain 204 262 5.3E-4 T 13-10-2018 IPR000644 CBS domain P40_06555 e647f5754497a07746349dbf65c7ab6e 419 Pfam PF00571 CBS domain 277 325 3.5E-5 T 13-10-2018 IPR000644 CBS domain P40_06555 e647f5754497a07746349dbf65c7ab6e 419 Gene3D G3DSA:3.30.465.10 339 418 9.4E-26 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 P40_06555 e647f5754497a07746349dbf65c7ab6e 419 Pfam PF01595 Domain of unknown function DUF21 12 181 8.3E-47 T 13-10-2018 IPR002550 CNNM, transmembrane domain P40_06555 e647f5754497a07746349dbf65c7ab6e 419 Gene3D G3DSA:3.10.580.10 186 338 1.1E-45 T 13-10-2018 P40_06555 e647f5754497a07746349dbf65c7ab6e 419 SMART SM01091 341 419 4.9E-22 T 13-10-2018 IPR005170 Transporter-associated domain P40_18450 19137473c0b327e839ccfb547f12e29e 212 Gene3D G3DSA:3.20.20.70 1 209 1.0E-58 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_18450 19137473c0b327e839ccfb547f12e29e 212 SUPERFAMILY SSF51391 4 198 3.27E-60 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 P40_18450 19137473c0b327e839ccfb547f12e29e 212 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 8 198 5.8E-60 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 P40_18450 19137473c0b327e839ccfb547f12e29e 212 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 6 210 26.5 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 P40_18450 19137473c0b327e839ccfb547f12e29e 212 Pfam PF02581 Thiamine monophosphate synthase 8 188 1.0E-58 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 P40_05465 1e43794a66bc9cf13078ba51d6a2101a 262 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 13-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 P40_05465 1e43794a66bc9cf13078ba51d6a2101a 262 Gene3D G3DSA:3.40.50.1860 7 221 3.3E-78 T 13-10-2018 P40_05465 1e43794a66bc9cf13078ba51d6a2101a 262 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 13-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 P40_05465 1e43794a66bc9cf13078ba51d6a2101a 262 SUPERFAMILY SSF53681 108 230 1.33E-31 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 P40_05465 1e43794a66bc9cf13078ba51d6a2101a 262 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 219 1.3E-57 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 P40_05465 1e43794a66bc9cf13078ba51d6a2101a 262 Gene3D G3DSA:3.40.50.1860 95 207 3.3E-78 T 13-10-2018 P40_05465 1e43794a66bc9cf13078ba51d6a2101a 262 Hamap MF_00258 Glutamate racemase [murI]. 3 252 30.178 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 P40_05465 1e43794a66bc9cf13078ba51d6a2101a 262 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 215 1.9E-23 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 P40_05465 1e43794a66bc9cf13078ba51d6a2101a 262 SUPERFAMILY SSF53681 4 106 1.7E-28 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 P40_07145 f9e8f3179f012d992486f41cd5c24ca5 242 SUPERFAMILY SSF63892 5 240 9.15E-98 T 13-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 P40_07145 f9e8f3179f012d992486f41cd5c24ca5 242 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 242 126.138 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 P40_07145 f9e8f3179f012d992486f41cd5c24ca5 242 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 7 240 3.1E-95 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 P40_07145 f9e8f3179f012d992486f41cd5c24ca5 242 Gene3D G3DSA:3.20.20.70 1 242 3.6E-104 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_07145 f9e8f3179f012d992486f41cd5c24ca5 242 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 7 239 3.1E-101 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 P40_17235 8f1759a048d011482dd571dd34c707d0 308 SUPERFAMILY SSF82866 72 289 9.55E-40 T 13-10-2018 P40_17235 8f1759a048d011482dd571dd34c707d0 308 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 116 279 7.3E-51 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P40_17235 8f1759a048d011482dd571dd34c707d0 308 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 37 281 4.1E-75 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 P40_17235 8f1759a048d011482dd571dd34c707d0 308 Pfam PF02355 Protein export membrane protein 114 290 7.6E-64 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial P40_17235 8f1759a048d011482dd571dd34c707d0 308 PRINTS PR01755 Bacterial translocase SecF protein signature 150 164 2.3E-27 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P40_17235 8f1759a048d011482dd571dd34c707d0 308 PRINTS PR01755 Bacterial translocase SecF protein signature 230 245 2.3E-27 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P40_17235 8f1759a048d011482dd571dd34c707d0 308 PRINTS PR01755 Bacterial translocase SecF protein signature 198 216 2.3E-27 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P40_17235 8f1759a048d011482dd571dd34c707d0 308 PRINTS PR01755 Bacterial translocase SecF protein signature 36 51 2.3E-27 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P40_17235 8f1759a048d011482dd571dd34c707d0 308 Pfam PF07549 SecD/SecF GG Motif 32 53 1.1E-7 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site P40_17235 8f1759a048d011482dd571dd34c707d0 308 Gene3D G3DSA:1.20.1640.10 104 298 2.9E-16 T 13-10-2018 P40_17235 8f1759a048d011482dd571dd34c707d0 308 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 9 293 27.408 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 SUPERFAMILY SSF53155 196 273 4.9E-17 T 13-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 Gene3D G3DSA:1.10.10.60 87 152 3.1E-22 T 13-10-2018 P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 SMART SM00342 105 187 9.0E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 Gene3D G3DSA:3.30.160.70 181 273 2.6E-28 T 13-10-2018 P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 Pfam PF12833 Helix-turn-helix domain 111 187 7.5E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 325 331 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 SUPERFAMILY SSF46689 92 137 7.53E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 PIRSF PIRSF000409 3 362 5.1E-136 T 13-10-2018 IPR016221 Bifunctional regulatory protein Ada P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 276 355 2.5E-32 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 Gene3D G3DSA:3.40.10.10 8 84 1.1E-31 T 13-10-2018 IPR035451 Ada-like domain superfamily P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 Gene3D G3DSA:1.10.10.10 274 359 3.1E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 SUPERFAMILY SSF46767 274 355 4.05E-31 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 Pfam PF02805 Metal binding domain of Ada 19 82 1.1E-31 T 13-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 SUPERFAMILY SSF57884 16 91 1.29E-32 T 13-10-2018 IPR035451 Ada-like domain superfamily P40_19885 f05c05009289a1e2f13fb35b6fe2655a 362 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 275 354 2.0E-36 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 P40_21400 df85dc07f8f3fa48c4f9832839e10b52 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 2.9E-16 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_21400 df85dc07f8f3fa48c4f9832839e10b52 205 Gene3D G3DSA:1.10.10.60 6 61 1.3E-17 T 13-10-2018 P40_21400 df85dc07f8f3fa48c4f9832839e10b52 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.8E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_21400 df85dc07f8f3fa48c4f9832839e10b52 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.8E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_21400 df85dc07f8f3fa48c4f9832839e10b52 205 SUPERFAMILY SSF48498 87 171 1.16E-9 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_21400 df85dc07f8f3fa48c4f9832839e10b52 205 SUPERFAMILY SSF46689 6 91 9.22E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_21400 df85dc07f8f3fa48c4f9832839e10b52 205 Gene3D G3DSA:1.10.357.10 62 198 1.2E-16 T 13-10-2018 P40_09160 ff7b720ade59e152e0f4fadfa97bb74c 293 SUPERFAMILY SSF46934 4 55 8.88E-18 T 13-10-2018 IPR009060 UBA-like superfamily GO:0005515 P40_09160 ff7b720ade59e152e0f4fadfa97bb74c 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 292 1.5E-102 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P40_09160 ff7b720ade59e152e0f4fadfa97bb74c 293 SUPERFAMILY SSF54713 57 147 7.63E-20 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 P40_09160 ff7b720ade59e152e0f4fadfa97bb74c 293 Gene3D G3DSA:1.10.286.20 193 239 4.9E-42 T 13-10-2018 P40_09160 ff7b720ade59e152e0f4fadfa97bb74c 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P40_09160 ff7b720ade59e152e0f4fadfa97bb74c 293 Gene3D G3DSA:3.30.479.20 57 151 7.3E-24 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 P40_09160 ff7b720ade59e152e0f4fadfa97bb74c 293 Gene3D G3DSA:1.10.8.10 1 56 6.1E-25 T 13-10-2018 P40_09160 ff7b720ade59e152e0f4fadfa97bb74c 293 Gene3D G3DSA:3.30.479.20 157 273 4.9E-42 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 P40_09160 ff7b720ade59e152e0f4fadfa97bb74c 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 291 79.111 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P40_09160 ff7b720ade59e152e0f4fadfa97bb74c 293 Pfam PF00889 Elongation factor TS 73 274 2.0E-68 T 13-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 P40_09160 ff7b720ade59e152e0f4fadfa97bb74c 293 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P40_09160 ff7b720ade59e152e0f4fadfa97bb74c 293 SUPERFAMILY SSF54713 152 292 2.22E-52 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 P40_10365 ace844e56e2934df1f2550c50a63419a 254 SMART SM00382 31 225 2.6E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_10365 ace844e56e2934df1f2550c50a63419a 254 SUPERFAMILY SSF52540 5 248 2.39E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10365 ace844e56e2934df1f2550c50a63419a 254 Gene3D G3DSA:3.40.50.300 6 252 3.3E-59 T 13-10-2018 P40_10365 ace844e56e2934df1f2550c50a63419a 254 Pfam PF00005 ABC transporter 23 177 1.5E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_10780 d0bed08b94aee73768bf6278b5dab074 530 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 528 327.969 T 13-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 P40_10780 d0bed08b94aee73768bf6278b5dab074 530 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 3 514 9.5E-246 T 13-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 P40_13860 ce8c011ec6027404ef106989aad5a4fd 393 SUPERFAMILY SSF53850 107 338 6.15E-6 T 13-10-2018 P40_13860 ce8c011ec6027404ef106989aad5a4fd 393 Gene3D G3DSA:3.40.190.170 119 374 1.2E-18 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_06645 beacad0993c437cee49cd6837c5aacda 399 Gene3D G3DSA:3.40.50.10540 7 392 2.3E-127 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_06645 beacad0993c437cee49cd6837c5aacda 399 SUPERFAMILY SSF89796 6 398 1.83E-130 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_06645 beacad0993c437cee49cd6837c5aacda 399 Gene3D G3DSA:3.30.1540.10 234 326 2.3E-127 T 13-10-2018 P40_06645 beacad0993c437cee49cd6837c5aacda 399 Pfam PF02515 CoA-transferase family III 8 374 3.6E-118 T 13-10-2018 IPR003673 CoA-transferase family III GO:0003824 P40_19820 ed97b5296f3c488612830b409384dcd8 140 Gene3D G3DSA:1.10.1660.10 1 126 1.2E-36 T 13-10-2018 P40_19820 ed97b5296f3c488612830b409384dcd8 140 SMART SM00422 2 71 7.4E-31 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_19820 ed97b5296f3c488612830b409384dcd8 140 Pfam PF09278 MerR, DNA binding 46 108 4.5E-21 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding P40_19820 ed97b5296f3c488612830b409384dcd8 140 SUPERFAMILY SSF46955 2 125 1.39E-37 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_19820 ed97b5296f3c488612830b409384dcd8 140 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_19820 ed97b5296f3c488612830b409384dcd8 140 Pfam PF00376 MerR family regulatory protein 3 40 8.1E-15 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_19820 ed97b5296f3c488612830b409384dcd8 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.9E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_19820 ed97b5296f3c488612830b409384dcd8 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.9E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_19820 ed97b5296f3c488612830b409384dcd8 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.9E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_00750 4f8365cb83fe615dc6ade82a9f378222 166 SUPERFAMILY SSF58113 18 155 1.96E-6 T 13-10-2018 P40_00750 4f8365cb83fe615dc6ade82a9f378222 166 Gene3D G3DSA:1.20.120.20 23 154 1.3E-6 T 13-10-2018 P40_18225 3b88d521eac433e8b9a24f7dff553bdf 230 Gene3D G3DSA:3.30.1140.32 108 208 1.4E-43 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18225 3b88d521eac433e8b9a24f7dff553bdf 230 SMART SM00322 60 125 1.2E-7 T 13-10-2018 IPR004087 K Homology domain GO:0003676 P40_18225 3b88d521eac433e8b9a24f7dff553bdf 230 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.96 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 P40_18225 3b88d521eac433e8b9a24f7dff553bdf 230 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.7E-95 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 P40_18225 3b88d521eac433e8b9a24f7dff553bdf 230 Pfam PF07650 KH domain 38 110 1.1E-20 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18225 3b88d521eac433e8b9a24f7dff553bdf 230 Gene3D G3DSA:3.30.300.20 18 107 1.3E-27 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta P40_18225 3b88d521eac433e8b9a24f7dff553bdf 230 SUPERFAMILY SSF54814 2 106 2.62E-37 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 P40_18225 3b88d521eac433e8b9a24f7dff553bdf 230 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 13-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18225 3b88d521eac433e8b9a24f7dff553bdf 230 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.3E-38 T 13-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18225 3b88d521eac433e8b9a24f7dff553bdf 230 SUPERFAMILY SSF54821 108 206 1.57E-38 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_05845 64a344373ffccf32ed3e95b2f095a516 314 Pfam PF00583 Acetyltransferase (GNAT) family 188 293 1.4E-17 T 13-10-2018 IPR000182 GNAT domain P40_05845 64a344373ffccf32ed3e95b2f095a516 314 SUPERFAMILY SSF55729 168 306 1.13E-24 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_05845 64a344373ffccf32ed3e95b2f095a516 314 SUPERFAMILY SSF46785 10 147 9.48E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_05845 64a344373ffccf32ed3e95b2f095a516 314 Gene3D G3DSA:3.40.630.30 163 311 1.8E-28 T 13-10-2018 P40_05845 64a344373ffccf32ed3e95b2f095a516 314 Gene3D G3DSA:1.10.10.10 4 140 5.2E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_05845 64a344373ffccf32ed3e95b2f095a516 314 Pfam PF12802 MarR family 38 94 1.8E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_10155 0a3ba7fda49a91648212512af53c5dfd 481 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 3 470 5.8E-148 T 13-10-2018 IPR021207 Integrating conjugative element protein, PFL4705 P40_18245 662c474d75a0725350d2235765dba96c 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.591 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 P40_18245 662c474d75a0725350d2235765dba96c 98 Pfam PF00276 Ribosomal protein L23 8 94 1.5E-31 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 P40_18245 662c474d75a0725350d2235765dba96c 98 SUPERFAMILY SSF54189 1 92 1.33E-30 T 13-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18245 662c474d75a0725350d2235765dba96c 98 Gene3D G3DSA:3.30.70.330 1 98 3.3E-36 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily P40_19745 7decea838929faf6e170f178cfb89162 619 Pfam PF02333 Phytase 303 612 2.3E-72 T 13-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 P40_19745 7decea838929faf6e170f178cfb89162 619 SUPERFAMILY SSF50956 50 281 9.68E-24 T 13-10-2018 P40_19745 7decea838929faf6e170f178cfb89162 619 Gene3D G3DSA:2.120.10.30 299 618 2.8E-109 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_19745 7decea838929faf6e170f178cfb89162 619 Gene3D G3DSA:2.120.10.30 77 252 4.9E-16 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_19745 7decea838929faf6e170f178cfb89162 619 SUPERFAMILY SSF50956 304 613 1.1E-74 T 13-10-2018 P40_07240 12f4b77240099c2e25f1c8ac879251bb 135 Pfam PF03918 Cytochrome C biogenesis protein 7 132 8.5E-51 T 13-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family P40_07240 12f4b77240099c2e25f1c8ac879251bb 135 Gene3D G3DSA:1.10.8.640 18 103 1.2E-36 T 13-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily P40_20490 be1a30ce9db7b4f6bf55c2ac5849e612 910 Gene3D G3DSA:1.10.10.10 845 909 1.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_20490 be1a30ce9db7b4f6bf55c2ac5849e612 910 Gene3D G3DSA:3.40.50.300 29 180 1.0E-6 T 13-10-2018 P40_20490 be1a30ce9db7b4f6bf55c2ac5849e612 910 Gene3D G3DSA:1.25.40.10 445 825 5.8E-48 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_20490 be1a30ce9db7b4f6bf55c2ac5849e612 910 SUPERFAMILY SSF46894 838 909 1.87E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_20490 be1a30ce9db7b4f6bf55c2ac5849e612 910 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 880 892 3.7E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20490 be1a30ce9db7b4f6bf55c2ac5849e612 910 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 850 864 3.7E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20490 be1a30ce9db7b4f6bf55c2ac5849e612 910 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 864 880 3.7E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20490 be1a30ce9db7b4f6bf55c2ac5849e612 910 SMART SM00421 847 904 1.0E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20490 be1a30ce9db7b4f6bf55c2ac5849e612 910 Pfam PF00196 Bacterial regulatory proteins, luxR family 849 904 1.8E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20490 be1a30ce9db7b4f6bf55c2ac5849e612 910 SUPERFAMILY SSF52540 43 236 1.33E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_20490 be1a30ce9db7b4f6bf55c2ac5849e612 910 SUPERFAMILY SSF48452 467 775 9.1E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_02800 40021f34e452d766a94a6eb12847132f 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 174 7.4E-37 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 P40_02800 40021f34e452d766a94a6eb12847132f 411 Gene3D G3DSA:2.40.340.10 334 405 4.3E-108 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 P40_02800 40021f34e452d766a94a6eb12847132f 411 SUPERFAMILY SSF63867 333 410 1.26E-10 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 P40_02800 40021f34e452d766a94a6eb12847132f 411 SUPERFAMILY SSF53218 185 327 3.4E-40 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily P40_02800 40021f34e452d766a94a6eb12847132f 411 Gene3D G3DSA:3.40.980.10 182 333 4.3E-108 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily P40_02800 40021f34e452d766a94a6eb12847132f 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 184 318 1.3E-29 T 13-10-2018 IPR001453 MoaB/Mog domain P40_02800 40021f34e452d766a94a6eb12847132f 411 SMART SM00852 187 325 1.5E-35 T 13-10-2018 IPR001453 MoaB/Mog domain P40_02800 40021f34e452d766a94a6eb12847132f 411 Pfam PF03454 MoeA C-terminal region (domain IV) 338 410 9.3E-9 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 P40_02800 40021f34e452d766a94a6eb12847132f 411 Gene3D G3DSA:2.170.190.11 52 148 4.3E-108 T 13-10-2018 P40_02800 40021f34e452d766a94a6eb12847132f 411 Pfam PF00994 Probable molybdopterin binding domain 188 323 1.9E-26 T 13-10-2018 IPR001453 MoaB/Mog domain P40_02800 40021f34e452d766a94a6eb12847132f 411 SUPERFAMILY SSF63882 9 182 1.28E-44 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 P40_02800 40021f34e452d766a94a6eb12847132f 411 Gene3D G3DSA:3.90.105.10 30 181 4.3E-108 T 13-10-2018 P40_11760 c2238fa82d809897c9d44f295498f0a3 201 SUPERFAMILY SSF47616 84 196 1.25E-26 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_11760 c2238fa82d809897c9d44f295498f0a3 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 4.9E-8 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_11760 c2238fa82d809897c9d44f295498f0a3 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 7.4E-9 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal P40_11760 c2238fa82d809897c9d44f295498f0a3 201 SUPERFAMILY SSF52833 1 78 9.54E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_11760 c2238fa82d809897c9d44f295498f0a3 201 Gene3D G3DSA:3.40.30.10 3 195 1.3E-63 T 13-10-2018 P40_11760 c2238fa82d809897c9d44f295498f0a3 201 Gene3D G3DSA:1.20.1050.10 83 188 1.3E-63 T 13-10-2018 P40_06300 2c42f5ba8ec9ddf0d3627f339d0e92e3 311 SUPERFAMILY SSF53850 93 296 1.77E-36 T 13-10-2018 P40_06300 2c42f5ba8ec9ddf0d3627f339d0e92e3 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 67 9.8E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_06300 2c42f5ba8ec9ddf0d3627f339d0e92e3 311 SUPERFAMILY SSF46785 4 82 2.21E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_06300 2c42f5ba8ec9ddf0d3627f339d0e92e3 311 Pfam PF03466 LysR substrate binding domain 92 292 8.5E-37 T 13-10-2018 IPR005119 LysR, substrate-binding P40_06300 2c42f5ba8ec9ddf0d3627f339d0e92e3 311 Gene3D G3DSA:1.10.10.10 7 88 2.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_06300 2c42f5ba8ec9ddf0d3627f339d0e92e3 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.7E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_06300 2c42f5ba8ec9ddf0d3627f339d0e92e3 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.7E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_06300 2c42f5ba8ec9ddf0d3627f339d0e92e3 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.7E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_06300 2c42f5ba8ec9ddf0d3627f339d0e92e3 311 Gene3D G3DSA:3.40.190.10 104 289 5.2E-55 T 13-10-2018 P40_06300 2c42f5ba8ec9ddf0d3627f339d0e92e3 311 Gene3D G3DSA:3.40.190.10 164 262 5.2E-55 T 13-10-2018 P40_07840 1f9d1c2f908755b266e91e1243d2088b 342 SUPERFAMILY SSF50129 1 142 7.38E-45 T 13-10-2018 IPR011032 GroES-like superfamily P40_07840 1f9d1c2f908755b266e91e1243d2088b 342 Gene3D G3DSA:3.40.50.720 125 305 3.0E-133 T 13-10-2018 P40_07840 1f9d1c2f908755b266e91e1243d2088b 342 Pfam PF16884 N-terminal domain of oxidoreductase 5 112 2.4E-41 T 13-10-2018 P40_07840 1f9d1c2f908755b266e91e1243d2088b 342 Gene3D G3DSA:3.90.180.10 9 334 3.0E-133 T 13-10-2018 P40_07840 1f9d1c2f908755b266e91e1243d2088b 342 Pfam PF00107 Zinc-binding dehydrogenase 157 278 7.6E-21 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 P40_07840 1f9d1c2f908755b266e91e1243d2088b 342 SMART SM00829 15 334 1.5E-5 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P40_07840 1f9d1c2f908755b266e91e1243d2088b 342 SUPERFAMILY SSF51735 123 302 1.43E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_12775 a9bd16ea60f2c3145ac2821ff6769dc8 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 13-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 P40_12775 a9bd16ea60f2c3145ac2821ff6769dc8 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 264 35.62 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 P40_12775 a9bd16ea60f2c3145ac2821ff6769dc8 267 Pfam PF00290 Tryptophan synthase alpha chain 8 263 2.6E-91 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 P40_12775 a9bd16ea60f2c3145ac2821ff6769dc8 267 Gene3D G3DSA:3.20.20.70 1 267 7.9E-105 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_12775 a9bd16ea60f2c3145ac2821ff6769dc8 267 SUPERFAMILY SSF51366 1 264 3.2E-95 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 P40_12775 a9bd16ea60f2c3145ac2821ff6769dc8 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 8.4E-79 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 P40_07300 5c2b8585e90f08fa609096735559e2d1 333 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 142 323 1.4E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_07300 5c2b8585e90f08fa609096735559e2d1 333 Gene3D G3DSA:1.10.3720.10 116 322 3.0E-19 T 13-10-2018 IPR035906 MetI-like superfamily P40_07300 5c2b8585e90f08fa609096735559e2d1 333 SUPERFAMILY SSF161098 117 316 6.15E-21 T 13-10-2018 IPR035906 MetI-like superfamily P40_10980 d3047f50a7d788f42bf9aec51dad7e8d 305 SUPERFAMILY SSF52402 163 297 3.93E-20 T 13-10-2018 P40_10980 d3047f50a7d788f42bf9aec51dad7e8d 305 Gene3D G3DSA:3.40.50.12370 3 305 3.2E-58 T 13-10-2018 P40_10980 d3047f50a7d788f42bf9aec51dad7e8d 305 SUPERFAMILY SSF52402 6 144 2.85E-11 T 13-10-2018 P40_10980 d3047f50a7d788f42bf9aec51dad7e8d 305 Pfam PF00582 Universal stress protein family 169 296 1.1E-14 T 13-10-2018 IPR006016 UspA P40_10980 d3047f50a7d788f42bf9aec51dad7e8d 305 Pfam PF00582 Universal stress protein family 8 142 2.7E-8 T 13-10-2018 IPR006016 UspA P40_21525 0d845edb1bed9355b082566bcafa37ff 609 Gene3D G3DSA:3.60.20.10 2 240 5.7E-78 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P40_21525 0d845edb1bed9355b082566bcafa37ff 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 40.777 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 P40_21525 0d845edb1bed9355b082566bcafa37ff 609 Gene3D G3DSA:3.40.50.10490 249 608 3.0E-147 T 13-10-2018 P40_21525 0d845edb1bed9355b082566bcafa37ff 609 Pfam PF01380 SIS domain 464 591 9.4E-28 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 P40_21525 0d845edb1bed9355b082566bcafa37ff 609 Pfam PF01380 SIS domain 292 418 6.1E-29 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 P40_21525 0d845edb1bed9355b082566bcafa37ff 609 Gene3D G3DSA:3.40.50.10490 447 594 3.0E-147 T 13-10-2018 P40_21525 0d845edb1bed9355b082566bcafa37ff 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.9E-262 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 P40_21525 0d845edb1bed9355b082566bcafa37ff 609 SUPERFAMILY SSF53697 245 609 2.5E-114 T 13-10-2018 P40_21525 0d845edb1bed9355b082566bcafa37ff 609 Pfam PF13522 Glutamine amidotransferase domain 53 189 1.7E-23 T 13-10-2018 P40_21525 0d845edb1bed9355b082566bcafa37ff 609 SUPERFAMILY SSF56235 2 235 2.57E-73 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P40_08215 0d0c7aae41ff976bd574a21c8be2d3c5 129 SUPERFAMILY SSF88723 1 121 9.53E-22 T 13-10-2018 IPR029060 PIN-like domain superfamily P40_08215 0d0c7aae41ff976bd574a21c8be2d3c5 129 Pfam PF01850 PIN domain 3 120 7.2E-16 T 13-10-2018 IPR002716 PIN domain P40_08215 0d0c7aae41ff976bd574a21c8be2d3c5 129 Gene3D G3DSA:3.40.50.1010 2 125 4.0E-14 T 13-10-2018 P40_12900 a03939fee6298efc553154d780195efc 341 Gene3D G3DSA:1.10.1040.10 189 336 9.8E-47 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 P40_12900 a03939fee6298efc553154d780195efc 341 Gene3D G3DSA:3.40.50.720 1 187 2.5E-61 T 13-10-2018 P40_12900 a03939fee6298efc553154d780195efc 341 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 188 209 - T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P40_12900 a03939fee6298efc553154d780195efc 341 SUPERFAMILY SSF51735 3 180 3.02E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_12900 a03939fee6298efc553154d780195efc 341 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 322 34.597 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P40_12900 a03939fee6298efc553154d780195efc 341 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 320 2.1E-47 T 13-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P40_12900 a03939fee6298efc553154d780195efc 341 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 159 6.7E-50 T 13-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P40_12900 a03939fee6298efc553154d780195efc 341 PIRSF PIRSF000114 1 332 4.0E-103 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P40_12900 a03939fee6298efc553154d780195efc 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 6.4E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P40_12900 a03939fee6298efc553154d780195efc 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 6.4E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P40_12900 a03939fee6298efc553154d780195efc 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 238 255 6.4E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P40_12900 a03939fee6298efc553154d780195efc 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 6.4E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P40_12900 a03939fee6298efc553154d780195efc 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 6.4E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P40_12900 a03939fee6298efc553154d780195efc 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 6.4E-43 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P40_12900 a03939fee6298efc553154d780195efc 341 SUPERFAMILY SSF48179 180 331 9.35E-51 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_05375 b349fb4c15fb604167b39d567c1054f3 80 Pfam PF11137 Protein of unknown function (DUF2909) 2 60 8.6E-21 T 13-10-2018 IPR021313 Protein of unknown function DUF2909 P40_02580 04e9604f2db2dcbe20bbea3d34d1172a 145 SUPERFAMILY SSF46785 13 143 4.69E-27 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_02580 04e9604f2db2dcbe20bbea3d34d1172a 145 Pfam PF12802 MarR family 35 93 1.3E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_02580 04e9604f2db2dcbe20bbea3d34d1172a 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site P40_02580 04e9604f2db2dcbe20bbea3d34d1172a 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 5.6E-6 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_02580 04e9604f2db2dcbe20bbea3d34d1172a 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 5.6E-6 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_02580 04e9604f2db2dcbe20bbea3d34d1172a 145 Gene3D G3DSA:1.10.10.10 2 143 6.3E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_02580 04e9604f2db2dcbe20bbea3d34d1172a 145 SMART SM00347 30 130 2.5E-19 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_14335 189ae7adbe380b269445f55762f57037 295 PIRSF PIRSF015558 6 292 5.4E-76 T 13-10-2018 IPR016634 WYL domain protein, s026 type P40_14335 189ae7adbe380b269445f55762f57037 295 Pfam PF13280 WYL domain 131 209 8.0E-14 T 13-10-2018 IPR026881 WYL domain P40_09080 b5dd24407fbce2b4d2e2bcbc850c2efe 626 Gene3D G3DSA:3.40.50.300 8 271 3.7E-46 T 13-10-2018 P40_09080 b5dd24407fbce2b4d2e2bcbc850c2efe 626 Pfam PF13307 Helicase C-terminal domain 449 605 1.4E-36 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 P40_09080 b5dd24407fbce2b4d2e2bcbc850c2efe 626 SMART SM00487 6 263 0.0033 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_09080 b5dd24407fbce2b4d2e2bcbc850c2efe 626 SMART SM00491 464 593 6.5E-39 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 P40_09080 b5dd24407fbce2b4d2e2bcbc850c2efe 626 Gene3D G3DSA:3.40.50.300 433 624 8.1E-37 T 13-10-2018 P40_09080 b5dd24407fbce2b4d2e2bcbc850c2efe 626 SUPERFAMILY SSF52540 176 579 3.71E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_09080 b5dd24407fbce2b4d2e2bcbc850c2efe 626 SUPERFAMILY SSF52540 7 584 8.44E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_09080 b5dd24407fbce2b4d2e2bcbc850c2efe 626 Pfam PF06733 DEAD_2 163 237 1.4E-5 T 13-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 P40_13750 75c329e25313c3206858ca81d3152520 341 Pfam PF03116 NQR2, RnfD, RnfE family 6 331 1.4E-106 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 P40_13750 75c329e25313c3206858ca81d3152520 341 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 332 2.3E-127 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 P40_13750 75c329e25313c3206858ca81d3152520 341 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 333 27.14 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 P40_10360 8351109f846c5a42055541964d65bd1f 237 Gene3D G3DSA:3.40.50.300 1 236 2.9E-55 T 13-10-2018 P40_10360 8351109f846c5a42055541964d65bd1f 237 SUPERFAMILY SSF52540 3 232 2.07E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10360 8351109f846c5a42055541964d65bd1f 237 Pfam PF00005 ABC transporter 20 164 9.2E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_10360 8351109f846c5a42055541964d65bd1f 237 SMART SM00382 29 213 4.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_10360 8351109f846c5a42055541964d65bd1f 237 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_11505 e82d8f86ce3283b3bd92972a10c06cc8 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 2.2E-12 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 P40_11505 e82d8f86ce3283b3bd92972a10c06cc8 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 154 2.2E-12 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 P40_11505 e82d8f86ce3283b3bd92972a10c06cc8 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 2.2E-12 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 P40_11505 e82d8f86ce3283b3bd92972a10c06cc8 196 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 23 164 2.0E-47 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 P40_11505 e82d8f86ce3283b3bd92972a10c06cc8 196 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 57 74 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 P40_11505 e82d8f86ce3283b3bd92972a10c06cc8 196 Gene3D G3DSA:2.40.100.10 19 188 2.1E-65 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily P40_11505 e82d8f86ce3283b3bd92972a10c06cc8 196 SUPERFAMILY SSF50891 19 187 2.19E-55 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily P40_06895 7c6a35199e3735197dcc7fac91608515 556 Gene3D G3DSA:3.40.50.300 3 212 9.2E-73 T 13-10-2018 P40_06895 7c6a35199e3735197dcc7fac91608515 556 Pfam PF00270 DEAD/DEAH box helicase 31 194 5.1E-48 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 P40_06895 7c6a35199e3735197dcc7fac91608515 556 Gene3D G3DSA:3.30.70.330 485 555 1.2E-9 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily P40_06895 7c6a35199e3735197dcc7fac91608515 556 SMART SM00487 25 223 4.8E-60 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_06895 7c6a35199e3735197dcc7fac91608515 556 Pfam PF03880 DbpA RNA binding domain 485 554 1.8E-19 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain P40_06895 7c6a35199e3735197dcc7fac91608515 556 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site P40_06895 7c6a35199e3735197dcc7fac91608515 556 SMART SM00490 259 340 2.7E-32 T 13-10-2018 IPR001650 Helicase, C-terminal P40_06895 7c6a35199e3735197dcc7fac91608515 556 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 556 43.486 T 13-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 P40_06895 7c6a35199e3735197dcc7fac91608515 556 Gene3D G3DSA:3.40.50.300 216 427 3.1E-52 T 13-10-2018 P40_06895 7c6a35199e3735197dcc7fac91608515 556 Pfam PF00271 Helicase conserved C-terminal domain 232 340 7.6E-30 T 13-10-2018 IPR001650 Helicase, C-terminal P40_06895 7c6a35199e3735197dcc7fac91608515 556 SUPERFAMILY SSF52540 75 362 2.3E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_19620 6843611ff58b16c1db59160a49711a39 289 SUPERFAMILY SSF46689 63 121 9.86E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_19620 6843611ff58b16c1db59160a49711a39 289 Gene3D G3DSA:1.10.10.60 65 127 2.1E-16 T 13-10-2018 P40_19620 6843611ff58b16c1db59160a49711a39 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 80 95 1.3E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_19620 6843611ff58b16c1db59160a49711a39 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 95 111 1.3E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_19620 6843611ff58b16c1db59160a49711a39 289 SMART SM00871 134 288 7.5E-45 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding P40_19620 6843611ff58b16c1db59160a49711a39 289 SUPERFAMILY SSF46689 10 61 3.4E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_19620 6843611ff58b16c1db59160a49711a39 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 64 107 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 P40_19620 6843611ff58b16c1db59160a49711a39 289 SUPERFAMILY SSF55136 134 288 4.06E-39 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily P40_19620 6843611ff58b16c1db59160a49711a39 289 SMART SM00342 27 111 2.5E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_19620 6843611ff58b16c1db59160a49711a39 289 Pfam PF12833 Helix-turn-helix domain 33 112 2.8E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_19620 6843611ff58b16c1db59160a49711a39 289 Gene3D G3DSA:1.10.10.60 10 64 1.9E-12 T 13-10-2018 P40_19620 6843611ff58b16c1db59160a49711a39 289 Gene3D G3DSA:3.20.80.10 134 289 4.3E-40 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily P40_19620 6843611ff58b16c1db59160a49711a39 289 Pfam PF06445 GyrI-like small molecule binding domain 134 288 8.2E-38 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain P40_17605 9c8d44149e58d21ef776bc332bc37a54 160 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 109 114 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site P40_17605 9c8d44149e58d21ef776bc332bc37a54 160 SUPERFAMILY SSF102712 52 128 1.07E-6 T 13-10-2018 P40_17605 9c8d44149e58d21ef776bc332bc37a54 160 TIGRFAM TIGR00608 radc: DNA repair protein RadC 34 160 1.2E-39 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 P40_17605 9c8d44149e58d21ef776bc332bc37a54 160 Gene3D G3DSA:3.40.140.10 36 160 1.2E-40 T 13-10-2018 P40_17605 9c8d44149e58d21ef776bc332bc37a54 160 Pfam PF04002 RadC-like JAB domain 40 158 7.0E-41 T 13-10-2018 IPR025657 RadC-like JAB domain P40_06950 3124bd099f7a2a3c74b5e93cad91aedd 730 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 165 1.3E-20 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_06950 3124bd099f7a2a3c74b5e93cad91aedd 730 Pfam PF00593 TonB dependent receptor 256 725 1.7E-38 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_06950 3124bd099f7a2a3c74b5e93cad91aedd 730 Gene3D G3DSA:2.170.130.10 48 173 3.1E-27 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_06950 3124bd099f7a2a3c74b5e93cad91aedd 730 SUPERFAMILY SSF56935 34 730 1.2E-119 T 13-10-2018 P40_06950 3124bd099f7a2a3c74b5e93cad91aedd 730 Gene3D G3DSA:2.40.170.20 180 730 9.4E-102 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_06950 3124bd099f7a2a3c74b5e93cad91aedd 730 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 69 730 7.6E-67 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 P40_16805 f9a62b6a3501066d57998f5b5fe78829 488 PRINTS PR00045 Sigma-54 factor signature 461 479 5.6E-31 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 P40_16805 f9a62b6a3501066d57998f5b5fe78829 488 PRINTS PR00045 Sigma-54 factor signature 199 216 5.6E-31 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 P40_16805 f9a62b6a3501066d57998f5b5fe78829 488 PRINTS PR00045 Sigma-54 factor signature 403 414 5.6E-31 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 P40_16805 f9a62b6a3501066d57998f5b5fe78829 488 PRINTS PR00045 Sigma-54 factor signature 387 399 5.6E-31 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 P40_16805 f9a62b6a3501066d57998f5b5fe78829 488 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 375 394 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 P40_16805 f9a62b6a3501066d57998f5b5fe78829 488 Gene3D G3DSA:1.10.10.60 428 485 1.1E-24 T 13-10-2018 P40_16805 f9a62b6a3501066d57998f5b5fe78829 488 Gene3D G3DSA:1.10.10.1330 124 247 6.0E-19 T 13-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily P40_16805 f9a62b6a3501066d57998f5b5fe78829 488 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 466 473 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 P40_16805 f9a62b6a3501066d57998f5b5fe78829 488 Pfam PF04552 Sigma-54, DNA binding domain 328 486 6.2E-71 T 13-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding P40_16805 f9a62b6a3501066d57998f5b5fe78829 488 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 5.4E-16 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 P40_16805 f9a62b6a3501066d57998f5b5fe78829 488 Pfam PF04963 Sigma-54 factor, core binding domain 119 315 1.7E-52 T 13-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 P40_16805 f9a62b6a3501066d57998f5b5fe78829 488 PIRSF PIRSF000774 1 488 1.1E-151 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 P40_16805 f9a62b6a3501066d57998f5b5fe78829 488 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 485 1.1E-147 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 P40_11810 541f3aa5422ff5e6b1a46b85842b392d 508 Gene3D G3DSA:3.40.50.1820 2 501 4.3E-125 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_11810 541f3aa5422ff5e6b1a46b85842b392d 508 Pfam PF00135 Carboxylesterase family 6 465 2.6E-91 T 13-10-2018 IPR002018 Carboxylesterase, type B P40_11810 541f3aa5422ff5e6b1a46b85842b392d 508 SUPERFAMILY SSF53474 5 481 2.86E-104 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_11810 541f3aa5422ff5e6b1a46b85842b392d 508 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 77 87 - T 13-10-2018 IPR019819 Carboxylesterase type B, conserved site P40_11810 541f3aa5422ff5e6b1a46b85842b392d 508 PRINTS PR00878 Cholinesterase signature 100 129 1.8E-5 T 13-10-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 P40_11810 541f3aa5422ff5e6b1a46b85842b392d 508 PRINTS PR00878 Cholinesterase signature 423 435 1.8E-5 T 13-10-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 P40_11810 541f3aa5422ff5e6b1a46b85842b392d 508 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 172 187 - T 13-10-2018 IPR019826 Carboxylesterase type B, active site P40_05640 bc0680555457c6b91fb4652169fb4267 157 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.1E-46 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type P40_05640 bc0680555457c6b91fb4652169fb4267 157 Pfam PF02082 Transcriptional regulator 1 83 5.1E-28 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type P40_05640 bc0680555457c6b91fb4652169fb4267 157 SUPERFAMILY SSF46785 2 132 2.45E-37 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_05640 bc0680555457c6b91fb4652169fb4267 157 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 2.4E-65 T 13-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 P40_05640 bc0680555457c6b91fb4652169fb4267 157 Gene3D G3DSA:1.10.10.10 1 145 3.3E-53 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_11565 3f64a178cf9a1c0878c669284edc4e89 568 SUPERFAMILY SSF53649 41 540 3.27E-82 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 P40_11565 3f64a178cf9a1c0878c669284edc4e89 568 Gene3D G3DSA:3.40.720.10 28 559 1.4E-93 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 P40_11565 3f64a178cf9a1c0878c669284edc4e89 568 Pfam PF00884 Sulfatase 41 397 9.7E-45 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 P40_02720 1e270e2dc59b440dd6d0fe9369b3f42f 201 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 P40_02720 1e270e2dc59b440dd6d0fe9369b3f42f 201 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 3.3E-62 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 P40_02720 1e270e2dc59b440dd6d0fe9369b3f42f 201 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 41.768 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 P40_02720 1e270e2dc59b440dd6d0fe9369b3f42f 201 Gene3D G3DSA:3.30.230.40 92 199 1.6E-38 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 P40_02720 1e270e2dc59b440dd6d0fe9369b3f42f 201 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 P40_02720 1e270e2dc59b440dd6d0fe9369b3f42f 201 SUPERFAMILY SSF54211 4 88 1.9E-32 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_02720 1e270e2dc59b440dd6d0fe9369b3f42f 201 SUPERFAMILY SSF54211 90 180 8.5E-35 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_02720 1e270e2dc59b440dd6d0fe9369b3f42f 201 Gene3D G3DSA:3.30.230.40 1 91 1.4E-36 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 P40_13835 fe49c1d6d241576908f651fc012c8bab 899 SUPERFAMILY SSF101904 534 885 5.75E-98 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal P40_13835 fe49c1d6d241576908f651fc012c8bab 899 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 5 876 23.858 T 13-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P40_13835 fe49c1d6d241576908f651fc012c8bab 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 589 639 1.9E-7 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 P40_13835 fe49c1d6d241576908f651fc012c8bab 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 686 723 3.6E-5 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 P40_13835 fe49c1d6d241576908f651fc012c8bab 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 728 772 2.5E-12 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 P40_13835 fe49c1d6d241576908f651fc012c8bab 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 779 823 8.6E-14 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 P40_13835 fe49c1d6d241576908f651fc012c8bab 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 541 584 2.4E-6 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 P40_13835 fe49c1d6d241576908f651fc012c8bab 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 828 874 4.8E-11 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 P40_13835 fe49c1d6d241576908f651fc012c8bab 899 Gene3D G3DSA:3.90.199.10 33 522 6.6E-229 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 P40_13835 fe49c1d6d241576908f651fc012c8bab 899 Gene3D G3DSA:1.10.268.10 370 494 6.6E-229 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 P40_13835 fe49c1d6d241576908f651fc012c8bab 899 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 507 1.3E-153 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P40_13835 fe49c1d6d241576908f651fc012c8bab 899 Gene3D G3DSA:3.30.1360.40 236 333 6.6E-229 T 13-10-2018 P40_13835 fe49c1d6d241576908f651fc012c8bab 899 SMART SM00434 11 500 6.1E-286 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P40_13835 fe49c1d6d241576908f651fc012c8bab 899 SUPERFAMILY SSF56719 30 522 6.41E-182 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 P40_13835 fe49c1d6d241576908f651fc012c8bab 899 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 639 1.3E-295 T 13-10-2018 P40_20655 9700d26af9dd33b2d127756002ebf89f 357 Gene3D G3DSA:2.40.50.100 46 103 3.0E-5 T 13-10-2018 P40_20655 9700d26af9dd33b2d127756002ebf89f 357 SUPERFAMILY SSF111369 43 250 3.66E-15 T 13-10-2018 P40_20655 9700d26af9dd33b2d127756002ebf89f 357 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 273 9.6E-19 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain P40_20655 9700d26af9dd33b2d127756002ebf89f 357 Gene3D G3DSA:1.10.287.470 104 171 2.3E-11 T 13-10-2018 P40_20655 9700d26af9dd33b2d127756002ebf89f 357 Gene3D G3DSA:2.40.30.170 214 332 4.6E-24 T 13-10-2018 P40_20655 9700d26af9dd33b2d127756002ebf89f 357 Pfam PF00529 HlyD membrane-fusion protein of T1SS 24 323 1.3E-6 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 P40_04260 7016c8278078b15036e108df02b8878c 90 Pfam PF03869 Arc-like DNA binding domain 9 47 3.1E-14 T 13-10-2018 IPR005569 Arc-like DNA binding domain GO:0003677 P40_04260 7016c8278078b15036e108df02b8878c 90 Gene3D G3DSA:1.10.1220.10 1 52 9.7E-22 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 P40_04260 7016c8278078b15036e108df02b8878c 90 SUPERFAMILY SSF47598 7 47 3.25E-12 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 P40_15925 04ea358ef7520b043f3bc59e16c62552 583 Gene3D G3DSA:1.10.287.950 216 518 5.8E-92 T 13-10-2018 P40_15925 04ea358ef7520b043f3bc59e16c62552 583 Pfam PF02203 Tar ligand binding domain homologue 6 155 4.9E-13 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 P40_15925 04ea358ef7520b043f3bc59e16c62552 583 SUPERFAMILY SSF47170 45 179 4.19E-11 T 13-10-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily P40_15925 04ea358ef7520b043f3bc59e16c62552 583 SUPERFAMILY SSF58104 236 523 7.32E-75 T 13-10-2018 P40_15925 04ea358ef7520b043f3bc59e16c62552 583 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 484 2.0E-53 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_15925 04ea358ef7520b043f3bc59e16c62552 583 SMART SM00283 269 516 2.8E-89 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_15925 04ea358ef7520b043f3bc59e16c62552 583 SMART SM00304 216 268 1.4E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_12260 e9444fc6abafe5699ba48d31453eebb8 310 Pfam PF04754 Putative transposase, YhgA-like 3 199 7.2E-30 T 13-10-2018 IPR006842 Transposase (putative), YhgA-like P40_12260 e9444fc6abafe5699ba48d31453eebb8 310 Pfam PF14261 Domain of unknown function (DUF4351) 254 307 7.5E-8 T 13-10-2018 IPR025587 Domain of unknown function DUF4351 P40_07455 ea71d2ea8b4616a39cf9c2ef10fc4358 273 Gene3D G3DSA:3.30.1130.10 15 132 8.2E-41 T 13-10-2018 P40_07455 ea71d2ea8b4616a39cf9c2ef10fc4358 273 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 15 124 8.6E-42 T 13-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 P40_07455 ea71d2ea8b4616a39cf9c2ef10fc4358 273 PIRSF PIRSF004750 1 273 2.6E-103 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 P40_07455 ea71d2ea8b4616a39cf9c2ef10fc4358 273 SUPERFAMILY SSF55620 177 258 2.08E-9 T 13-10-2018 P40_07455 ea71d2ea8b4616a39cf9c2ef10fc4358 273 Gene3D G3DSA:3.30.1130.10 137 273 3.4E-50 T 13-10-2018 P40_07455 ea71d2ea8b4616a39cf9c2ef10fc4358 273 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 273 126.993 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 P40_07455 ea71d2ea8b4616a39cf9c2ef10fc4358 273 TIGRFAM TIGR03138 QueF: queuine synthase 4 273 3.0E-107 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 P40_07455 ea71d2ea8b4616a39cf9c2ef10fc4358 273 Pfam PF14489 QueF-like protein 187 260 2.0E-20 T 13-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 P40_21700 1b0143dacebe53094d94f3fec2672c62 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.3E-27 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_21700 1b0143dacebe53094d94f3fec2672c62 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.917 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_21700 1b0143dacebe53094d94f3fec2672c62 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 13-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_21700 1b0143dacebe53094d94f3fec2672c62 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 26 4.0E-7 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_21700 1b0143dacebe53094d94f3fec2672c62 44 Pfam PF00468 Ribosomal protein L34 1 44 5.4E-26 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_09450 dd16221fb4cced2c66acc0c2c219cd03 249 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 106 228 2.0E-37 T 13-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 P40_09450 dd16221fb4cced2c66acc0c2c219cd03 249 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 15 85 1.2E-18 T 13-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 P40_09450 dd16221fb4cced2c66acc0c2c219cd03 249 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 5 234 40.616 T 13-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 P40_09450 dd16221fb4cced2c66acc0c2c219cd03 249 SUPERFAMILY SSF55729 80 235 5.72E-23 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_09450 dd16221fb4cced2c66acc0c2c219cd03 249 PIRSF PIRSF037208 1 244 6.1E-89 T 13-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 P40_18585 b03dde590b78abd67a558e02632983d7 512 SUPERFAMILY SSF53901 290 405 6.55E-20 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_18585 b03dde590b78abd67a558e02632983d7 512 Gene3D G3DSA:2.40.50.840 434 508 1.2E-14 T 13-10-2018 P40_14560 9c840adc568a12240179e95e472456d2 1129 PIRSF PIRSF000980 4 1125 0.0 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 P40_14560 9c840adc568a12240179e95e472456d2 1129 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 4 1122 20.004 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 P40_14560 9c840adc568a12240179e95e472456d2 1129 Gene3D G3DSA:3.40.50.10930 7 310 1.8E-114 T 13-10-2018 P40_14560 9c840adc568a12240179e95e472456d2 1129 Gene3D G3DSA:1.10.10.990 854 912 9.7E-6 T 13-10-2018 P40_14560 9c840adc568a12240179e95e472456d2 1129 Gene3D G3DSA:1.10.10.160 83 202 1.8E-114 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily P40_14560 9c840adc568a12240179e95e472456d2 1129 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 5 795 1.6E-289 T 13-10-2018 P40_14560 9c840adc568a12240179e95e472456d2 1129 Gene3D G3DSA:1.10.486.10 450 658 3.9E-192 T 13-10-2018 P40_14560 9c840adc568a12240179e95e472456d2 1129 Gene3D G3DSA:3.40.50.300 337 796 3.9E-192 T 13-10-2018 P40_14560 9c840adc568a12240179e95e472456d2 1129 SUPERFAMILY SSF52980 812 1117 1.77E-56 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 P40_14560 9c840adc568a12240179e95e472456d2 1129 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 5 1076 0.0 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 P40_14560 9c840adc568a12240179e95e472456d2 1129 SUPERFAMILY SSF52540 4 349 6.59E-104 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_14560 9c840adc568a12240179e95e472456d2 1129 SUPERFAMILY SSF52540 357 799 1.12E-91 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_21305 66212e05f8f01443c44b26341f5b2d39 948 SUPERFAMILY SSF141868 691 939 2.35E-93 T 13-10-2018 IPR035919 EAL domain superfamily P40_21305 66212e05f8f01443c44b26341f5b2d39 948 Pfam PF13426 PAS domain 399 501 5.0E-13 T 13-10-2018 IPR000014 PAS domain P40_21305 66212e05f8f01443c44b26341f5b2d39 948 SUPERFAMILY SSF55785 270 384 6.98E-17 T 13-10-2018 IPR035965 PAS domain superfamily P40_21305 66212e05f8f01443c44b26341f5b2d39 948 SMART SM00091 264 331 6.3 T 13-10-2018 IPR000014 PAS domain P40_21305 66212e05f8f01443c44b26341f5b2d39 948 SMART SM00091 389 455 7.7E-11 T 13-10-2018 IPR000014 PAS domain P40_21305 66212e05f8f01443c44b26341f5b2d39 948 SMART SM00086 338 381 1.3E-6 T 13-10-2018 IPR001610 PAC motif P40_21305 66212e05f8f01443c44b26341f5b2d39 948 SMART SM00086 461 503 2.3E-6 T 13-10-2018 IPR001610 PAC motif P40_21305 66212e05f8f01443c44b26341f5b2d39 948 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 513 673 1.1E-32 T 13-10-2018 IPR000160 GGDEF domain P40_21305 66212e05f8f01443c44b26341f5b2d39 948 SMART SM00052 685 931 1.3E-122 T 13-10-2018 IPR001633 EAL domain P40_21305 66212e05f8f01443c44b26341f5b2d39 948 Pfam PF00563 EAL domain 692 926 4.7E-77 T 13-10-2018 IPR001633 EAL domain P40_21305 66212e05f8f01443c44b26341f5b2d39 948 SUPERFAMILY SSF55785 381 501 1.27E-23 T 13-10-2018 IPR035965 PAS domain superfamily P40_21305 66212e05f8f01443c44b26341f5b2d39 948 SUPERFAMILY SSF55073 519 676 4.55E-45 T 13-10-2018 IPR029787 Nucleotide cyclase P40_21305 66212e05f8f01443c44b26341f5b2d39 948 Gene3D G3DSA:3.30.450.20 257 377 2.2E-23 T 13-10-2018 P40_21305 66212e05f8f01443c44b26341f5b2d39 948 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 386 509 7.6E-21 T 13-10-2018 IPR000014 PAS domain P40_21305 66212e05f8f01443c44b26341f5b2d39 948 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 291 387 1.9E-6 T 13-10-2018 IPR000014 PAS domain P40_21305 66212e05f8f01443c44b26341f5b2d39 948 Pfam PF08447 PAS fold 291 374 1.3E-19 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 P40_21305 66212e05f8f01443c44b26341f5b2d39 948 Pfam PF00990 Diguanylate cyclase, GGDEF domain 515 671 3.4E-41 T 13-10-2018 IPR000160 GGDEF domain P40_21305 66212e05f8f01443c44b26341f5b2d39 948 Gene3D G3DSA:3.30.450.20 383 511 7.9E-30 T 13-10-2018 P40_21305 66212e05f8f01443c44b26341f5b2d39 948 Gene3D G3DSA:3.30.70.270 512 687 1.3E-54 T 13-10-2018 P40_21305 66212e05f8f01443c44b26341f5b2d39 948 SMART SM00267 503 675 8.5E-57 T 13-10-2018 IPR000160 GGDEF domain P40_21305 66212e05f8f01443c44b26341f5b2d39 948 Gene3D G3DSA:3.20.20.450 688 940 4.1E-106 T 13-10-2018 IPR035919 EAL domain superfamily P40_10895 a82561e36c5d6372ea5ec2d65d377bd0 185 Pfam PF13563 2'-5' RNA ligase superfamily 32 171 1.7E-9 T 13-10-2018 P40_10895 a82561e36c5d6372ea5ec2d65d377bd0 185 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 1 175 4.2E-24 T 13-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 P40_10895 a82561e36c5d6372ea5ec2d65d377bd0 185 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 185 17.386 T 13-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 P40_10895 a82561e36c5d6372ea5ec2d65d377bd0 185 Gene3D G3DSA:3.90.1140.10 1 184 4.4E-32 T 13-10-2018 P40_10895 a82561e36c5d6372ea5ec2d65d377bd0 185 SUPERFAMILY SSF55144 1 179 1.1E-28 T 13-10-2018 IPR009097 Cyclic phosphodiesterase P40_02370 2303e3c2c643d0ea2a6a376321781bd1 264 Gene3D G3DSA:3.10.180.10 4 130 1.4E-15 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_02370 2303e3c2c643d0ea2a6a376321781bd1 264 Pfam PF13468 Glyoxalase-like domain 11 181 6.0E-8 T 13-10-2018 IPR025870 Glyoxalase-like domain P40_02370 2303e3c2c643d0ea2a6a376321781bd1 264 SUPERFAMILY SSF54593 164 252 3.86E-5 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_02370 2303e3c2c643d0ea2a6a376321781bd1 264 SUPERFAMILY SSF54593 2 133 6.23E-15 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_01970 19fd53cf6d5146df275f69eec17a4a03 139 Gene3D G3DSA:3.30.530.20 2 139 2.9E-14 T 13-10-2018 IPR023393 START-like domain superfamily P40_01970 19fd53cf6d5146df275f69eec17a4a03 139 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 2 138 8.2E-14 T 13-10-2018 IPR019587 Polyketide cyclase/dehydrase P40_01970 19fd53cf6d5146df275f69eec17a4a03 139 SUPERFAMILY SSF55961 1 138 5.69E-24 T 13-10-2018 P40_18235 53498baec870d92a6bb37544438571b7 91 Gene3D G3DSA:3.30.860.10 1 91 4.1E-40 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18235 53498baec870d92a6bb37544438571b7 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.619 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18235 53498baec870d92a6bb37544438571b7 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 13-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18235 53498baec870d92a6bb37544438571b7 91 PIRSF PIRSF002144 1 91 1.2E-30 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18235 53498baec870d92a6bb37544438571b7 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.3E-22 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18235 53498baec870d92a6bb37544438571b7 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.3E-22 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18235 53498baec870d92a6bb37544438571b7 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.3E-22 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18235 53498baec870d92a6bb37544438571b7 91 Pfam PF00203 Ribosomal protein S19 3 83 6.7E-36 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18235 53498baec870d92a6bb37544438571b7 91 SUPERFAMILY SSF54570 3 83 2.75E-34 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18235 53498baec870d92a6bb37544438571b7 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 2.3E-43 T 13-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 P40_16635 f5807c13ce6dfb677814e6899cba80af 399 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 392 3.3E-35 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_16635 f5807c13ce6dfb677814e6899cba80af 399 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 353 372 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_16635 f5807c13ce6dfb677814e6899cba80af 399 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 232 1.1E-21 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_16635 f5807c13ce6dfb677814e6899cba80af 399 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 125 5.5E-18 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_16635 f5807c13ce6dfb677814e6899cba80af 399 Gene3D G3DSA:1.20.140.10 245 398 2.2E-40 T 13-10-2018 P40_16635 f5807c13ce6dfb677814e6899cba80af 399 SUPERFAMILY SSF56645 1 257 1.11E-71 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_16635 f5807c13ce6dfb677814e6899cba80af 399 Gene3D G3DSA:1.10.540.10 1 128 6.0E-55 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_16635 f5807c13ce6dfb677814e6899cba80af 399 Gene3D G3DSA:2.40.110.10 129 244 9.6E-49 T 13-10-2018 P40_16635 f5807c13ce6dfb677814e6899cba80af 399 SUPERFAMILY SSF47203 242 398 1.14E-44 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_12675 5a52e96bf29e51bd9a4ad7f02579bb71 80 Pfam PF04325 Protein of unknown function (DUF465) 29 74 1.6E-11 T 13-10-2018 IPR007420 Protein of unknown function DUF465 P40_12675 5a52e96bf29e51bd9a4ad7f02579bb71 80 Gene3D G3DSA:1.20.58.660 11 80 5.4E-17 T 13-10-2018 P40_20290 c73acd8f452cc23440614f665fa75386 150 Pfam PF13430 Domain of unknown function (DUF4112) 13 115 1.2E-32 T 13-10-2018 IPR025187 Protein of unknown function DUF4112 P40_13240 c2cd769f57b290a598770aa80381f637 1130 Hamap MF_00970 Ribonuclease E [rne]. 1 1083 33.931 T 13-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 P40_13240 c2cd769f57b290a598770aa80381f637 1130 Pfam PF10150 Ribonuclease E/G family 119 388 4.7E-98 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 P40_13240 c2cd769f57b290a598770aa80381f637 1130 Pfam PF00575 S1 RNA binding domain 33 116 1.7E-14 T 13-10-2018 IPR003029 S1 domain GO:0003676 P40_13240 c2cd769f57b290a598770aa80381f637 1130 SMART SM00316 34 117 3.8E-11 T 13-10-2018 IPR022967 RNA-binding domain, S1 P40_13240 c2cd769f57b290a598770aa80381f637 1130 SUPERFAMILY SSF50249 37 123 1.72E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_13240 c2cd769f57b290a598770aa80381f637 1130 Gene3D G3DSA:2.40.50.140 28 123 4.0E-32 T 13-10-2018 P40_13240 c2cd769f57b290a598770aa80381f637 1130 Gene3D G3DSA:3.40.1260.20 398 506 8.5E-37 T 13-10-2018 P40_13240 c2cd769f57b290a598770aa80381f637 1130 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 422 6.3E-170 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 P40_21600 9f603e2c09d5a62b1765691369059f1d 566 SMART SM01091 486 566 8.7E-8 T 13-10-2018 IPR005170 Transporter-associated domain P40_21600 9f603e2c09d5a62b1765691369059f1d 566 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 5.4E-46 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 P40_21600 9f603e2c09d5a62b1765691369059f1d 566 Gene3D G3DSA:1.20.1530.20 7 391 8.9E-18 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily P40_21600 9f603e2c09d5a62b1765691369059f1d 566 Pfam PF03471 Transporter associated domain 488 563 3.4E-5 T 13-10-2018 IPR005170 Transporter-associated domain P40_09035 5d0be8935fabfa49becc1b350f0acf4e 242 Gene3D G3DSA:2.160.20.70 131 241 1.4E-31 T 13-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 P40_09035 5d0be8935fabfa49becc1b350f0acf4e 242 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 8 86 1.1E-7 T 13-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 P40_09035 5d0be8935fabfa49becc1b350f0acf4e 242 Gene3D G3DSA:3.30.750.120 4 121 4.0E-12 T 13-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily P40_09035 5d0be8935fabfa49becc1b350f0acf4e 242 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 11 235 4.4E-56 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 P40_09035 5d0be8935fabfa49becc1b350f0acf4e 242 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 136 234 2.0E-30 T 13-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 P40_09035 5d0be8935fabfa49becc1b350f0acf4e 242 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 10 239 23.966 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 P40_09035 5d0be8935fabfa49becc1b350f0acf4e 242 SUPERFAMILY SSF63848 134 237 2.62E-30 T 13-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 P40_06825 90520e4833e6c519e7db25fe7be38722 670 SUPERFAMILY SSF51971 334 521 2.82E-45 T 13-10-2018 P40_06825 90520e4833e6c519e7db25fe7be38722 670 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 2.2E-16 T 13-10-2018 P40_06825 90520e4833e6c519e7db25fe7be38722 670 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 2.2E-16 T 13-10-2018 P40_06825 90520e4833e6c519e7db25fe7be38722 670 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 460 478 2.2E-16 T 13-10-2018 P40_06825 90520e4833e6c519e7db25fe7be38722 670 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 500 518 2.2E-16 T 13-10-2018 P40_06825 90520e4833e6c519e7db25fe7be38722 670 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 642 1.3E-28 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_06825 90520e4833e6c519e7db25fe7be38722 670 SUPERFAMILY SSF51395 4 363 9.58E-110 T 13-10-2018 P40_06825 90520e4833e6c519e7db25fe7be38722 670 SUPERFAMILY SSF51905 470 628 2.02E-21 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_06825 90520e4833e6c519e7db25fe7be38722 670 Gene3D G3DSA:3.40.50.720 376 663 5.1E-113 T 13-10-2018 P40_06825 90520e4833e6c519e7db25fe7be38722 670 Gene3D G3DSA:3.50.50.60 472 626 5.1E-113 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_06825 90520e4833e6c519e7db25fe7be38722 670 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 331 3.4E-77 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 P40_06825 90520e4833e6c519e7db25fe7be38722 670 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 402 1.6E-5 T 13-10-2018 P40_06825 90520e4833e6c519e7db25fe7be38722 670 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 461 475 1.6E-5 T 13-10-2018 P40_06825 90520e4833e6c519e7db25fe7be38722 670 Gene3D G3DSA:3.20.20.70 3 369 9.7E-121 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_09345 0ed2d790ad35cfe217b989cc0ce349ca 309 SUPERFAMILY SSF53850 89 298 2.35E-51 T 13-10-2018 P40_09345 0ed2d790ad35cfe217b989cc0ce349ca 309 Gene3D G3DSA:3.40.190.10 91 291 6.9E-74 T 13-10-2018 P40_09345 0ed2d790ad35cfe217b989cc0ce349ca 309 Gene3D G3DSA:3.40.190.10 163 266 6.9E-74 T 13-10-2018 P40_09345 0ed2d790ad35cfe217b989cc0ce349ca 309 SUPERFAMILY SSF46785 4 111 1.88E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_09345 0ed2d790ad35cfe217b989cc0ce349ca 309 Gene3D G3DSA:1.10.10.10 3 89 1.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_09345 0ed2d790ad35cfe217b989cc0ce349ca 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_09345 0ed2d790ad35cfe217b989cc0ce349ca 309 Pfam PF03466 LysR substrate binding domain 88 294 2.4E-50 T 13-10-2018 IPR005119 LysR, substrate-binding P40_03280 3f1512cead30fe8e5318dfa22cba3d64 262 Gene3D G3DSA:1.10.12.10 205 262 2.5E-15 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_03280 3f1512cead30fe8e5318dfa22cba3d64 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 261 4.6E-54 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_03280 3f1512cead30fe8e5318dfa22cba3d64 262 Gene3D G3DSA:3.90.226.10 1 204 1.5E-67 T 13-10-2018 P40_03280 3f1512cead30fe8e5318dfa22cba3d64 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 P40_03280 3f1512cead30fe8e5318dfa22cba3d64 262 SUPERFAMILY SSF52096 6 262 9.54E-76 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_03560 1694bc3b05e5f531b0171c3e3c41822d 356 Pfam PF00633 Helix-hairpin-helix motif 102 129 1.8E-8 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 P40_03560 1694bc3b05e5f531b0171c3e3c41822d 356 Gene3D G3DSA:1.10.1670.10 12 213 7.7E-88 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 P40_03560 1694bc3b05e5f531b0171c3e3c41822d 356 SMART SM00478 41 192 9.9E-48 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 P40_03560 1694bc3b05e5f531b0171c3e3c41822d 356 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 194 210 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 P40_03560 1694bc3b05e5f531b0171c3e3c41822d 356 Gene3D G3DSA:1.10.340.30 23 134 7.7E-88 T 13-10-2018 P40_03560 1694bc3b05e5f531b0171c3e3c41822d 356 SUPERFAMILY SSF55811 222 347 1.15E-27 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 P40_03560 1694bc3b05e5f531b0171c3e3c41822d 356 SUPERFAMILY SSF48150 6 225 2.51E-77 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 P40_03560 1694bc3b05e5f531b0171c3e3c41822d 356 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 171 1.6E-21 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 P40_03560 1694bc3b05e5f531b0171c3e3c41822d 356 Pfam PF14815 NUDIX domain 237 345 1.2E-25 T 13-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 P40_03560 1694bc3b05e5f531b0171c3e3c41822d 356 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 8 276 5.7E-114 T 13-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 P40_03560 1694bc3b05e5f531b0171c3e3c41822d 356 Gene3D G3DSA:3.90.79.10 228 354 6.0E-17 T 13-10-2018 P40_09240 8f4f7e0f2307f768accff4e2b7b92ae2 422 SUPERFAMILY SSF82829 228 309 9.29E-19 T 13-10-2018 P40_09240 8f4f7e0f2307f768accff4e2b7b92ae2 422 SUPERFAMILY SSF52402 15 223 3.99E-58 T 13-10-2018 P40_09240 8f4f7e0f2307f768accff4e2b7b92ae2 422 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 195 1.7E-49 T 13-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 P40_09240 8f4f7e0f2307f768accff4e2b7b92ae2 422 Pfam PF11734 TilS substrate C-terminal domain 352 422 2.8E-12 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 P40_09240 8f4f7e0f2307f768accff4e2b7b92ae2 422 Gene3D G3DSA:1.20.59.20 226 310 9.2E-14 T 13-10-2018 P40_09240 8f4f7e0f2307f768accff4e2b7b92ae2 422 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 353 395 1.7E-8 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 P40_09240 8f4f7e0f2307f768accff4e2b7b92ae2 422 Pfam PF01171 PP-loop family 19 192 2.7E-48 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 P40_09240 8f4f7e0f2307f768accff4e2b7b92ae2 422 Pfam PF09179 TilS substrate binding domain 240 306 5.3E-16 T 13-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 P40_09240 8f4f7e0f2307f768accff4e2b7b92ae2 422 SUPERFAMILY SSF56037 321 411 4.45E-13 T 13-10-2018 P40_09240 8f4f7e0f2307f768accff4e2b7b92ae2 422 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 6 299 22.792 T 13-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 P40_09240 8f4f7e0f2307f768accff4e2b7b92ae2 422 Gene3D G3DSA:3.40.50.620 10 225 1.4E-65 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_09240 8f4f7e0f2307f768accff4e2b7b92ae2 422 SMART SM00977 352 422 8.1E-12 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 P40_13840 ceb6843d7e1faff98d4c3d1c60f66d32 442 Pfam PF01979 Amidohydrolase family 63 411 4.6E-69 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P40_13840 ceb6843d7e1faff98d4c3d1c60f66d32 442 Gene3D G3DSA:2.30.40.10 16 430 6.2E-167 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_13840 ceb6843d7e1faff98d4c3d1c60f66d32 442 SUPERFAMILY SSF51338 7 437 2.64E-25 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_13840 ceb6843d7e1faff98d4c3d1c60f66d32 442 Gene3D G3DSA:3.20.20.140 66 356 6.2E-167 T 13-10-2018 P40_13840 ceb6843d7e1faff98d4c3d1c60f66d32 442 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 7 438 40.772 T 13-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 P40_13840 ceb6843d7e1faff98d4c3d1c60f66d32 442 SUPERFAMILY SSF51556 65 364 3.83E-100 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_12945 388a953a1f5aa805c0a40481e71c8fe4 423 Pfam PF00144 Beta-lactamase 20 408 7.8E-75 T 13-10-2018 IPR001466 Beta-lactamase-related P40_12945 388a953a1f5aa805c0a40481e71c8fe4 423 SUPERFAMILY SSF56601 14 418 1.45E-97 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like P40_12945 388a953a1f5aa805c0a40481e71c8fe4 423 Gene3D G3DSA:3.40.710.10 16 422 5.3E-133 T 13-10-2018 P40_03855 95cd39efe0bb4ff7effeb44f91a81e9e 219 Gene3D G3DSA:1.20.1050.10 83 194 9.0E-42 T 13-10-2018 P40_03855 95cd39efe0bb4ff7effeb44f91a81e9e 219 SUPERFAMILY SSF47616 82 212 1.08E-26 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_03855 95cd39efe0bb4ff7effeb44f91a81e9e 219 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 80 2.3E-11 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_03855 95cd39efe0bb4ff7effeb44f91a81e9e 219 Pfam PF13410 Glutathione S-transferase, C-terminal domain 128 190 4.9E-10 T 13-10-2018 P40_03855 95cd39efe0bb4ff7effeb44f91a81e9e 219 Gene3D G3DSA:3.40.30.10 5 197 9.0E-42 T 13-10-2018 P40_03855 95cd39efe0bb4ff7effeb44f91a81e9e 219 SUPERFAMILY SSF52833 1 105 2.24E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_05630 79fa3937b7626399b177a811832365f1 169 Pfam PF13683 Integrase core domain 78 144 2.2E-34 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 P40_05630 79fa3937b7626399b177a811832365f1 169 SUPERFAMILY SSF53098 1 149 5.94E-39 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_05630 79fa3937b7626399b177a811832365f1 169 Gene3D G3DSA:3.30.420.10 1 168 3.2E-17 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_02845 a52626930615dd235caf33312fa9fa16 181 SUPERFAMILY SSF50630 14 160 1.69E-31 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily P40_02845 a52626930615dd235caf33312fa9fa16 181 Pfam PF05618 Putative ATP-dependant zinc protease 14 159 5.5E-31 T 13-10-2018 P40_02845 a52626930615dd235caf33312fa9fa16 181 Gene3D G3DSA:2.40.70.10 11 155 3.3E-37 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily P40_13445 a190deaaeef5102b928ebc4e8f2e3f8e 314 Gene3D G3DSA:2.60.120.1440 96 226 7.9E-20 T 13-10-2018 P40_13445 a190deaaeef5102b928ebc4e8f2e3f8e 314 Pfam PF16220 Domain of unknown function (DUF4880) 2 44 1.9E-14 T 13-10-2018 IPR032623 FecR, N-terminal P40_13445 a190deaaeef5102b928ebc4e8f2e3f8e 314 PIRSF PIRSF018266 1 314 4.8E-81 T 13-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component P40_13445 a190deaaeef5102b928ebc4e8f2e3f8e 314 Pfam PF04773 FecR protein 102 194 6.0E-17 T 13-10-2018 IPR006860 FecR protein P40_05140 034584048e7124241eca0716790fc989 167 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 6 162 17.218 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 P40_05140 034584048e7124241eca0716790fc989 167 Pfam PF04390 Lipopolysaccharide-assembly 36 157 2.7E-8 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 P40_05140 034584048e7124241eca0716790fc989 167 Gene3D G3DSA:3.30.160.150 20 167 2.4E-25 T 13-10-2018 P40_17985 506cd860c18c6421f070dd1b81b596cd 338 Gene3D G3DSA:1.10.10.60 238 338 1.2E-24 T 13-10-2018 P40_17985 506cd860c18c6421f070dd1b81b596cd 338 Pfam PF12833 Helix-turn-helix domain 262 337 1.8E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_17985 506cd860c18c6421f070dd1b81b596cd 338 SUPERFAMILY SSF46689 291 337 2.46E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_17985 506cd860c18c6421f070dd1b81b596cd 338 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 211 4.2E-29 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_17985 506cd860c18c6421f070dd1b81b596cd 338 SMART SM00342 255 337 2.6E-27 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_17985 506cd860c18c6421f070dd1b81b596cd 338 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 5.5E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_17985 506cd860c18c6421f070dd1b81b596cd 338 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 5.5E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_03030 9c11b3a2e5527a00cd2bf2b3abf97096 256 Pfam PF04230 Polysaccharide pyruvyl transferase 41 190 8.5E-9 T 13-10-2018 IPR007345 Polysaccharide pyruvyl transferase P40_11790 73896ca1497f384ae30d3bcfbae3a51f 225 Gene3D G3DSA:1.10.3720.10 4 222 2.0E-55 T 13-10-2018 IPR035906 MetI-like superfamily P40_11790 73896ca1497f384ae30d3bcfbae3a51f 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 218 2.7E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_11790 73896ca1497f384ae30d3bcfbae3a51f 225 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 219 6.8E-72 T 13-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 P40_11790 73896ca1497f384ae30d3bcfbae3a51f 225 SUPERFAMILY SSF161098 8 218 7.06E-49 T 13-10-2018 IPR035906 MetI-like superfamily P40_16375 ee0d0b366d88693ea44056fa5bf07aa0 287 Pfam PF01478 Type IV leader peptidase family 136 243 5.3E-25 T 13-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 P40_16375 ee0d0b366d88693ea44056fa5bf07aa0 287 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 18 123 2.2E-36 T 13-10-2018 IPR010627 Peptidase A24A, N-terminal P40_16375 ee0d0b366d88693ea44056fa5bf07aa0 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 223 238 3.9E-28 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial P40_16375 ee0d0b366d88693ea44056fa5bf07aa0 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 200 210 3.9E-28 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial P40_16375 ee0d0b366d88693ea44056fa5bf07aa0 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 142 159 3.9E-28 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial P40_16375 ee0d0b366d88693ea44056fa5bf07aa0 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 211 222 3.9E-28 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial P40_15755 e6679073adf705ddf965bd140a14667e 574 SUPERFAMILY SSF47203 285 445 5.8E-38 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_15755 e6679073adf705ddf965bd140a14667e 574 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 276 1.0E-18 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_15755 e6679073adf705ddf965bd140a14667e 574 SUPERFAMILY SSF56645 90 296 1.44E-40 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_15755 e6679073adf705ddf965bd140a14667e 574 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 287 442 2.6E-33 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_15755 e6679073adf705ddf965bd140a14667e 574 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 402 421 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_15755 e6679073adf705ddf965bd140a14667e 574 Gene3D G3DSA:1.20.140.10 288 445 1.8E-36 T 13-10-2018 P40_15755 e6679073adf705ddf965bd140a14667e 574 Gene3D G3DSA:2.40.110.20 135 287 6.5E-45 T 13-10-2018 P40_19825 7d1dbc242124af44bdba093c18a80d1e 409 Pfam PF03600 Citrate transporter 5 356 2.6E-25 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 P40_11440 1cd4f6079f905540ac73a251cbffd45d 426 Gene3D G3DSA:3.30.50.30 3 53 1.2E-25 T 13-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily P40_11440 1cd4f6079f905540ac73a251cbffd45d 426 Gene3D G3DSA:1.10.8.60 317 424 1.5E-40 T 13-10-2018 P40_11440 1cd4f6079f905540ac73a251cbffd45d 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 11 413 4.7E-207 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 P40_11440 1cd4f6079f905540ac73a251cbffd45d 426 SMART SM01086 318 413 6.3E-31 T 13-10-2018 IPR019489 Clp ATPase, C-terminal P40_11440 1cd4f6079f905540ac73a251cbffd45d 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 3.9E-20 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 P40_11440 1cd4f6079f905540ac73a251cbffd45d 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 318 392 6.2E-16 T 13-10-2018 IPR019489 Clp ATPase, C-terminal P40_11440 1cd4f6079f905540ac73a251cbffd45d 426 SMART SM00994 13 52 2.5E-24 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 P40_11440 1cd4f6079f905540ac73a251cbffd45d 426 SUPERFAMILY SSF57716 14 49 1.14E-11 T 13-10-2018 P40_11440 1cd4f6079f905540ac73a251cbffd45d 426 Gene3D G3DSA:3.40.50.300 58 316 1.1E-109 T 13-10-2018 P40_11440 1cd4f6079f905540ac73a251cbffd45d 426 SMART SM00382 113 265 1.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_11440 1cd4f6079f905540ac73a251cbffd45d 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 6 416 53.698 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 P40_11440 1cd4f6079f905540ac73a251cbffd45d 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 311 1.7E-49 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_11440 1cd4f6079f905540ac73a251cbffd45d 426 SUPERFAMILY SSF52540 63 398 2.82E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07905 3b4f430a5ec816a9c9f37aa41778b365 140 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 136 12.377 T 13-10-2018 IPR022907 VapC family GO:0004540 P40_07905 3b4f430a5ec816a9c9f37aa41778b365 140 SUPERFAMILY SSF88723 1 137 8.97E-32 T 13-10-2018 IPR029060 PIN-like domain superfamily P40_07905 3b4f430a5ec816a9c9f37aa41778b365 140 Pfam PF01850 PIN domain 2 122 3.6E-14 T 13-10-2018 IPR002716 PIN domain P40_07905 3b4f430a5ec816a9c9f37aa41778b365 140 Gene3D G3DSA:3.40.50.1010 1 138 1.7E-41 T 13-10-2018 P40_18205 8ebaa793597c33076272ab65c5563987 122 SMART SM01374 1 122 2.0E-85 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 P40_18205 8ebaa793597c33076272ab65c5563987 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.5E-55 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 P40_18205 8ebaa793597c33076272ab65c5563987 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.1E-58 T 13-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 P40_18205 8ebaa793597c33076272ab65c5563987 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.41 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 P40_18205 8ebaa793597c33076272ab65c5563987 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 13-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18205 8ebaa793597c33076272ab65c5563987 122 SUPERFAMILY SSF50193 1 122 3.53E-51 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 P40_18205 8ebaa793597c33076272ab65c5563987 122 Gene3D G3DSA:2.40.150.20 1 122 1.5E-54 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 P40_12650 309912d8e10f7cb0ee91b6cf14e6fc5c 255 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_12650 309912d8e10f7cb0ee91b6cf14e6fc5c 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 228 249 4.5E-7 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal P40_12650 309912d8e10f7cb0ee91b6cf14e6fc5c 255 SMART SM00382 28 227 1.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_12650 309912d8e10f7cb0ee91b6cf14e6fc5c 255 Gene3D G3DSA:3.40.50.300 2 254 8.6E-61 T 13-10-2018 P40_12650 309912d8e10f7cb0ee91b6cf14e6fc5c 255 Pfam PF00005 ABC transporter 19 178 9.5E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_12650 309912d8e10f7cb0ee91b6cf14e6fc5c 255 SUPERFAMILY SSF52540 3 249 1.78E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03490 444c6958362d247f12a4a8b5546bdd51 300 Gene3D G3DSA:3.40.190.290 91 299 3.7E-38 T 13-10-2018 P40_03490 444c6958362d247f12a4a8b5546bdd51 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.6E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_03490 444c6958362d247f12a4a8b5546bdd51 300 SUPERFAMILY SSF46785 1 111 3.27E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_03490 444c6958362d247f12a4a8b5546bdd51 300 SUPERFAMILY SSF53850 91 298 3.38E-38 T 13-10-2018 P40_03490 444c6958362d247f12a4a8b5546bdd51 300 Pfam PF03466 LysR substrate binding domain 90 295 1.8E-39 T 13-10-2018 IPR005119 LysR, substrate-binding P40_03490 444c6958362d247f12a4a8b5546bdd51 300 Gene3D G3DSA:1.10.10.10 1 89 2.6E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_02695 ac54166788c01b887c9c15e93d26ee6c 499 Gene3D G3DSA:3.50.50.60 158 249 6.5E-14 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_02695 ac54166788c01b887c9c15e93d26ee6c 499 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 176 200 2.7E-5 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_02695 ac54166788c01b887c9c15e93d26ee6c 499 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 2.7E-5 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_02695 ac54166788c01b887c9c15e93d26ee6c 499 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 57 4.7E-7 T 13-10-2018 P40_02695 ac54166788c01b887c9c15e93d26ee6c 499 Pfam PF00743 Flavin-binding monooxygenase-like 82 344 1.4E-11 T 13-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 P40_02695 ac54166788c01b887c9c15e93d26ee6c 499 SUPERFAMILY SSF51905 1 386 2.87E-51 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_02695 ac54166788c01b887c9c15e93d26ee6c 499 Gene3D G3DSA:3.50.50.60 313 437 6.7E-8 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_02695 ac54166788c01b887c9c15e93d26ee6c 499 Gene3D G3DSA:3.50.50.60 4 157 5.0E-35 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_02695 ac54166788c01b887c9c15e93d26ee6c 499 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.1E-5 T 13-10-2018 P40_02695 ac54166788c01b887c9c15e93d26ee6c 499 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 180 198 4.1E-5 T 13-10-2018 P40_09705 e65dca922242a98c76dfa3b435e2a26a 337 Gene3D G3DSA:3.40.50.300 10 337 7.3E-89 T 13-10-2018 P40_09705 e65dca922242a98c76dfa3b435e2a26a 337 SUPERFAMILY SSF52540 16 325 2.04E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_09705 e65dca922242a98c76dfa3b435e2a26a 337 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 17 334 3.2E-82 T 13-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 P40_09705 e65dca922242a98c76dfa3b435e2a26a 337 Pfam PF02374 Anion-transporting ATPase 14 335 8.2E-75 T 13-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 P40_20030 6cd8dbe773a96bd41f6bbfed2d3e6afb 369 Pfam PF00196 Bacterial regulatory proteins, luxR family 309 359 1.6E-6 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20030 6cd8dbe773a96bd41f6bbfed2d3e6afb 369 SUPERFAMILY SSF46894 297 363 1.05E-12 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_20030 6cd8dbe773a96bd41f6bbfed2d3e6afb 369 SMART SM00421 306 363 1.0E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20030 6cd8dbe773a96bd41f6bbfed2d3e6afb 369 Gene3D G3DSA:1.10.10.10 258 368 1.8E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_20030 6cd8dbe773a96bd41f6bbfed2d3e6afb 369 ProSitePatterns PS00622 LuxR-type HTH domain signature. 323 350 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20305 7563846ba722615e5b2187e66e5c71c3 396 Gene3D G3DSA:1.20.1720.10 14 389 1.8E-93 T 13-10-2018 P40_20305 7563846ba722615e5b2187e66e5c71c3 396 Pfam PF07690 Major Facilitator Superfamily 17 358 6.0E-49 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_20305 7563846ba722615e5b2187e66e5c71c3 396 SUPERFAMILY SSF103473 8 383 2.62E-61 T 13-10-2018 IPR036259 MFS transporter superfamily P40_20305 7563846ba722615e5b2187e66e5c71c3 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 11 389 3.2E-74 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 P40_09120 e57321664aaa2be5f1ea5c09087952fc 524 PIRSF PIRSF036492 13 493 3.1E-84 T 13-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 P40_09120 e57321664aaa2be5f1ea5c09087952fc 524 SUPERFAMILY SSF53720 7 465 2.23E-128 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_09120 e57321664aaa2be5f1ea5c09087952fc 524 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 262 273 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 P40_09120 e57321664aaa2be5f1ea5c09087952fc 524 Pfam PF00171 Aldehyde dehydrogenase family 6 464 2.2E-125 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_09120 e57321664aaa2be5f1ea5c09087952fc 524 Gene3D G3DSA:3.40.605.10 9 459 2.6E-136 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_09120 e57321664aaa2be5f1ea5c09087952fc 524 Gene3D G3DSA:3.40.309.10 238 431 2.6E-136 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_09120 e57321664aaa2be5f1ea5c09087952fc 524 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 234 241 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 P40_13950 11c6c70c27ffeda7b028fdf3fa509b91 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 218 3.4E-25 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_13950 11c6c70c27ffeda7b028fdf3fa509b91 380 Gene3D G3DSA:1.10.540.10 5 122 1.0E-35 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_13950 11c6c70c27ffeda7b028fdf3fa509b91 380 Gene3D G3DSA:2.40.110.10 123 235 3.4E-44 T 13-10-2018 P40_13950 11c6c70c27ffeda7b028fdf3fa509b91 380 SUPERFAMILY SSF47203 229 378 8.54E-47 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_13950 11c6c70c27ffeda7b028fdf3fa509b91 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 1.5E-43 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_13950 11c6c70c27ffeda7b028fdf3fa509b91 380 Gene3D G3DSA:1.20.140.10 236 380 7.9E-46 T 13-10-2018 P40_13950 11c6c70c27ffeda7b028fdf3fa509b91 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 120 7.9E-29 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_13950 11c6c70c27ffeda7b028fdf3fa509b91 380 SUPERFAMILY SSF56645 6 241 3.01E-79 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_19535 67190d6bb9fceb396555f9066014ca0a 132 SUPERFAMILY SSF54534 46 122 1.31E-14 T 13-10-2018 P40_19535 67190d6bb9fceb396555f9066014ca0a 132 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 47 122 6.5E-16 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 P40_19535 67190d6bb9fceb396555f9066014ca0a 132 Gene3D G3DSA:3.10.50.30 42 131 2.9E-28 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 P40_19535 67190d6bb9fceb396555f9066014ca0a 132 PIRSF PIRSF006092 22 124 8.2E-23 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 P40_19535 67190d6bb9fceb396555f9066014ca0a 132 Pfam PF14760 Rnk N-terminus 4 41 6.9E-9 T 13-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain P40_19260 1b79282474059711c0381a4e55a42fd5 385 Pfam PF04055 Radical SAM superfamily 64 221 3.6E-15 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P40_19260 1b79282474059711c0381a4e55a42fd5 385 Hamap MF_01694 Biotin synthase [bioB]. 19 327 42.634 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 P40_19260 1b79282474059711c0381a4e55a42fd5 385 Gene3D G3DSA:3.20.20.70 18 328 1.0E-127 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_19260 1b79282474059711c0381a4e55a42fd5 385 SMART SM00729 57 269 1.9E-41 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 P40_19260 1b79282474059711c0381a4e55a42fd5 385 SMART SM00876 234 326 7.9E-46 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 P40_19260 1b79282474059711c0381a4e55a42fd5 385 SUPERFAMILY SSF102114 19 326 1.83E-93 T 13-10-2018 P40_19260 1b79282474059711c0381a4e55a42fd5 385 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 234 324 7.8E-19 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 P40_19260 1b79282474059711c0381a4e55a42fd5 385 TIGRFAM TIGR00433 bioB: biotin synthase 29 324 5.9E-127 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 P40_19260 1b79282474059711c0381a4e55a42fd5 385 PIRSF PIRSF001619 2 332 4.5E-137 T 13-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 P40_20495 66b4f08b94e6923dd40c416fc097b999 435 Pfam PF13660 Domain of unknown function (DUF4147) 21 241 6.1E-83 T 13-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 P40_20495 66b4f08b94e6923dd40c416fc097b999 435 SUPERFAMILY SSF82544 17 433 1.57E-144 T 13-10-2018 P40_20495 66b4f08b94e6923dd40c416fc097b999 435 Gene3D G3DSA:3.40.50.10180 50 264 1.3E-136 T 13-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 P40_20495 66b4f08b94e6923dd40c416fc097b999 435 Pfam PF05161 MOFRL family 323 427 5.2E-36 T 13-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 P40_20495 66b4f08b94e6923dd40c416fc097b999 435 Gene3D G3DSA:3.40.1480.10 265 428 1.3E-136 T 13-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily P40_04295 8b5efbaf374ecfed015738a87bba8ea9 203 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 184 2.3E-28 T 13-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 P40_04295 8b5efbaf374ecfed015738a87bba8ea9 203 PIRSF PIRSF011489 1 195 3.0E-56 T 13-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 P40_05265 bf5879ac8bc816aa37a44a0c72a10319 236 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 11 157 6.3E-10 T 13-10-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family P40_05265 bf5879ac8bc816aa37a44a0c72a10319 236 SUPERFAMILY SSF54001 10 175 2.26E-27 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily P40_05265 bf5879ac8bc816aa37a44a0c72a10319 236 Gene3D G3DSA:3.90.1720.10 1 181 5.3E-27 T 13-10-2018 P40_20445 f6bb14e97e4831eb76010867784cd8e6 375 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 157 316 3.0E-15 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_20445 f6bb14e97e4831eb76010867784cd8e6 375 Gene3D G3DSA:3.40.190.170 20 345 3.8E-64 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_17020 5bde8764697e41641126b810ea631712 598 Gene3D G3DSA:3.40.50.2300 466 590 9.1E-17 T 13-10-2018 P40_17020 5bde8764697e41641126b810ea631712 598 SMART SM00448 466 578 6.8E-10 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_17020 5bde8764697e41641126b810ea631712 598 SMART SM00388 219 284 2.1E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_17020 5bde8764697e41641126b810ea631712 598 SUPERFAMILY SSF55874 273 439 1.31E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_17020 5bde8764697e41641126b810ea631712 598 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 439 6.4E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_17020 5bde8764697e41641126b810ea631712 598 SUPERFAMILY SSF47384 202 284 2.75E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_17020 5bde8764697e41641126b810ea631712 598 SMART SM00387 330 441 3.8E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_17020 5bde8764697e41641126b810ea631712 598 SUPERFAMILY SSF52172 468 587 2.99E-18 T 13-10-2018 IPR011006 CheY-like superfamily P40_17020 5bde8764697e41641126b810ea631712 598 Gene3D G3DSA:1.10.287.130 185 282 1.1E-15 T 13-10-2018 P40_17020 5bde8764697e41641126b810ea631712 598 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 1.3E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_17020 5bde8764697e41641126b810ea631712 598 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 438 1.3E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_17020 5bde8764697e41641126b810ea631712 598 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 1.3E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_17020 5bde8764697e41641126b810ea631712 598 Pfam PF00512 His Kinase A (phospho-acceptor) domain 220 284 4.1E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_17020 5bde8764697e41641126b810ea631712 598 Gene3D G3DSA:3.30.565.10 290 448 6.2E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_17020 5bde8764697e41641126b810ea631712 598 Pfam PF00072 Response regulator receiver domain 469 578 6.8E-9 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_16590 037637f8259eda92db1ee4e1f72f42a3 548 Gene3D G3DSA:3.50.50.60 31 107 1.2E-18 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_16590 037637f8259eda92db1ee4e1f72f42a3 548 Gene3D G3DSA:3.50.50.60 156 344 1.2E-14 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_16590 037637f8259eda92db1ee4e1f72f42a3 548 Pfam PF13450 NAD(P)-binding Rossmann-like domain 35 102 9.0E-13 T 13-10-2018 P40_16590 037637f8259eda92db1ee4e1f72f42a3 548 SUPERFAMILY SSF51905 30 532 9.72E-43 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_00775 1243456e2315693f7604266640d4baed 367 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 339 32.736 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 P40_00775 1243456e2315693f7604266640d4baed 367 Pfam PF02222 ATP-grasp domain 102 268 1.9E-51 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type P40_00775 1243456e2315693f7604266640d4baed 367 SUPERFAMILY SSF52440 2 82 4.32E-10 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_00775 1243456e2315693f7604266640d4baed 367 Gene3D G3DSA:3.30.470.20 93 336 2.2E-86 T 13-10-2018 P40_00775 1243456e2315693f7604266640d4baed 367 SUPERFAMILY SSF51246 293 355 1.41E-16 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 P40_00775 1243456e2315693f7604266640d4baed 367 Gene3D G3DSA:3.30.1490.20 108 170 2.2E-86 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_00775 1243456e2315693f7604266640d4baed 367 Gene3D G3DSA:3.40.50.20 1 83 1.5E-18 T 13-10-2018 P40_00775 1243456e2315693f7604266640d4baed 367 SUPERFAMILY SSF56059 93 287 1.56E-52 T 13-10-2018 P40_02040 da81ce37af281c98c3aae223114fa39c 269 Gene3D G3DSA:1.20.1080.10 1 249 1.2E-68 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 P40_02040 da81ce37af281c98c3aae223114fa39c 269 Pfam PF01226 Formate/nitrite transporter 8 257 9.1E-66 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 P40_16570 c387596b778920bcb3fe362ef11410a7 131 Gene3D G3DSA:3.30.230.10 3 131 1.7E-51 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P40_16570 c387596b778920bcb3fe362ef11410a7 131 Pfam PF00380 Ribosomal protein S9/S16 11 131 1.8E-45 T 13-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 P40_16570 c387596b778920bcb3fe362ef11410a7 131 ProSitePatterns PS00360 Ribosomal protein S9 signature. 70 88 - T 13-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 P40_16570 c387596b778920bcb3fe362ef11410a7 131 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 2 131 32.764 T 13-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid P40_16570 c387596b778920bcb3fe362ef11410a7 131 SUPERFAMILY SSF54211 8 131 7.59E-48 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_03130 12ad50801bd364c5a9d3d33366c786d0 324 SUPERFAMILY SSF51735 108 277 2.51E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_03130 12ad50801bd364c5a9d3d33366c786d0 324 Pfam PF00107 Zinc-binding dehydrogenase 147 269 3.3E-22 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 P40_03130 12ad50801bd364c5a9d3d33366c786d0 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 85 3.2E-8 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P40_03130 12ad50801bd364c5a9d3d33366c786d0 324 Gene3D G3DSA:3.40.50.720 116 259 5.1E-80 T 13-10-2018 P40_03130 12ad50801bd364c5a9d3d33366c786d0 324 SMART SM00829 5 320 1.1E-19 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P40_03130 12ad50801bd364c5a9d3d33366c786d0 324 Gene3D G3DSA:3.90.180.10 14 320 5.1E-80 T 13-10-2018 P40_03130 12ad50801bd364c5a9d3d33366c786d0 324 SUPERFAMILY SSF50129 3 134 2.13E-27 T 13-10-2018 IPR011032 GroES-like superfamily P40_08465 49cd4bea37069fda4e8f1ba05c9a2535 379 Pfam PF12698 ABC-2 family transporter protein 24 368 5.2E-25 T 13-10-2018 P40_10770 bcc6181ba1b9139c99a8b09b11ca6c46 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.6E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_10770 bcc6181ba1b9139c99a8b09b11ca6c46 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.6E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_10770 bcc6181ba1b9139c99a8b09b11ca6c46 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.6E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_10770 bcc6181ba1b9139c99a8b09b11ca6c46 324 Gene3D G3DSA:3.40.190.10 92 303 3.4E-99 T 13-10-2018 P40_10770 bcc6181ba1b9139c99a8b09b11ca6c46 324 Pfam PF03466 LysR substrate binding domain 89 292 6.1E-42 T 13-10-2018 IPR005119 LysR, substrate-binding P40_10770 bcc6181ba1b9139c99a8b09b11ca6c46 324 Gene3D G3DSA:1.10.10.10 1 86 2.2E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_10770 bcc6181ba1b9139c99a8b09b11ca6c46 324 SUPERFAMILY SSF53850 90 321 1.57E-44 T 13-10-2018 P40_10770 bcc6181ba1b9139c99a8b09b11ca6c46 324 SUPERFAMILY SSF46785 1 89 3.53E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_10770 bcc6181ba1b9139c99a8b09b11ca6c46 324 Gene3D G3DSA:3.40.190.10 167 267 3.4E-99 T 13-10-2018 P40_10770 bcc6181ba1b9139c99a8b09b11ca6c46 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 2.0E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_00645 05bc08d31a027ee3ef142cc20b42dd3f 321 Pfam PF02911 Formyl transferase, C-terminal domain 212 310 9.5E-28 T 13-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P40_00645 05bc08d31a027ee3ef142cc20b42dd3f 321 SUPERFAMILY SSF53328 9 212 1.57E-63 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P40_00645 05bc08d31a027ee3ef142cc20b42dd3f 321 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 11 310 3.2E-95 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 P40_00645 05bc08d31a027ee3ef142cc20b42dd3f 321 Gene3D G3DSA:3.40.50.170 4 214 3.9E-78 T 13-10-2018 P40_00645 05bc08d31a027ee3ef142cc20b42dd3f 321 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 141 164 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P40_00645 05bc08d31a027ee3ef142cc20b42dd3f 321 SUPERFAMILY SSF50486 213 314 8.24E-30 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 P40_00645 05bc08d31a027ee3ef142cc20b42dd3f 321 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 10 313 35.736 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 P40_00645 05bc08d31a027ee3ef142cc20b42dd3f 321 Pfam PF00551 Formyl transferase 12 189 1.8E-43 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P40_00645 05bc08d31a027ee3ef142cc20b42dd3f 321 Gene3D G3DSA:3.10.25.10 215 320 4.2E-30 T 13-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P40_19330 806bbcaabd47b4ace66709c37532fee2 228 Pfam PF04350 Pilus assembly protein, PilO 63 205 2.0E-53 T 13-10-2018 IPR007445 Pilus assembly protein, PilO P40_19330 806bbcaabd47b4ace66709c37532fee2 228 Gene3D G3DSA:1.10.287.540 70 105 7.9E-9 T 13-10-2018 P40_19330 806bbcaabd47b4ace66709c37532fee2 228 PIRSF PIRSF016482 3 221 5.3E-66 T 13-10-2018 IPR007445 Pilus assembly protein, PilO P40_19330 806bbcaabd47b4ace66709c37532fee2 228 Gene3D G3DSA:3.30.70.60 106 214 1.8E-37 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 P40_11550 c36eb68da27408d2351569227b0a7aa5 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 52 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site P40_11550 c36eb68da27408d2351569227b0a7aa5 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 1.4E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_11550 c36eb68da27408d2351569227b0a7aa5 196 SUPERFAMILY SSF48498 77 191 3.32E-27 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_11550 c36eb68da27408d2351569227b0a7aa5 196 Gene3D G3DSA:1.10.357.10 2 195 5.6E-47 T 13-10-2018 P40_11550 c36eb68da27408d2351569227b0a7aa5 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 4.9E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_11550 c36eb68da27408d2351569227b0a7aa5 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 4.9E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_11550 c36eb68da27408d2351569227b0a7aa5 196 SUPERFAMILY SSF46689 3 80 3.03E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_17440 efbe74c743bcc50f7433279464d0bd07 237 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 19 237 1.6E-73 T 13-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type P40_17440 efbe74c743bcc50f7433279464d0bd07 237 Pfam PF14348 Domain of unknown function (DUF4400) 55 234 5.0E-60 T 13-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type P40_07620 cf572ea53429a1764c47b20fa7ebf7de 394 Gene3D G3DSA:1.20.140.10 241 394 2.4E-29 T 13-10-2018 P40_07620 cf572ea53429a1764c47b20fa7ebf7de 394 SUPERFAMILY SSF56645 4 249 9.29E-70 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_07620 cf572ea53429a1764c47b20fa7ebf7de 394 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 389 4.6E-20 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_07620 cf572ea53429a1764c47b20fa7ebf7de 394 Gene3D G3DSA:2.40.110.10 130 240 8.2E-36 T 13-10-2018 P40_07620 cf572ea53429a1764c47b20fa7ebf7de 394 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 224 6.8E-20 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_07620 cf572ea53429a1764c47b20fa7ebf7de 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 126 5.6E-21 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_07620 cf572ea53429a1764c47b20fa7ebf7de 394 SUPERFAMILY SSF47203 236 391 8.38E-18 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_07620 cf572ea53429a1764c47b20fa7ebf7de 394 Gene3D G3DSA:1.10.540.10 2 125 1.7E-31 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_19815 6e9b657cab9fbb0c67b2da7c0692255c 302 SUPERFAMILY SSF161111 21 212 4.45E-50 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_19815 6e9b657cab9fbb0c67b2da7c0692255c 302 SUPERFAMILY SSF160240 221 290 5.1E-10 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 P40_19815 6e9b657cab9fbb0c67b2da7c0692255c 302 Gene3D G3DSA:1.20.1510.10 19 213 3.5E-38 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_19815 6e9b657cab9fbb0c67b2da7c0692255c 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 21 291 4.2E-74 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 P40_19815 6e9b657cab9fbb0c67b2da7c0692255c 302 Pfam PF01545 Cation efflux family 24 211 3.2E-42 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 P40_21210 4a6cf8b0d5c5413638a197031b45e762 195 Gene3D G3DSA:1.10.357.10 3 193 2.9E-48 T 13-10-2018 P40_21210 4a6cf8b0d5c5413638a197031b45e762 195 SUPERFAMILY SSF46689 7 74 4.59E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_21210 4a6cf8b0d5c5413638a197031b45e762 195 Pfam PF13305 WHG domain 89 171 5.9E-16 T 13-10-2018 IPR025996 WHG domain P40_21210 4a6cf8b0d5c5413638a197031b45e762 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 2.5E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_21210 4a6cf8b0d5c5413638a197031b45e762 195 SUPERFAMILY SSF48498 86 192 2.82E-18 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_21210 4a6cf8b0d5c5413638a197031b45e762 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.5E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_21210 4a6cf8b0d5c5413638a197031b45e762 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.5E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_00525 624485b593316171b6b8ab85a6a0a2cf 323 Pfam PF04463 Protein of unknown function (DUF523) 15 155 3.9E-34 T 13-10-2018 IPR007553 Domain of unknown function DUF523 P40_00525 624485b593316171b6b8ab85a6a0a2cf 323 PIRSF PIRSF037004 7 323 2.0E-108 T 13-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 P40_00525 624485b593316171b6b8ab85a6a0a2cf 323 Pfam PF08349 Protein of unknown function (DUF1722) 198 314 6.0E-32 T 13-10-2018 IPR013560 Domain of unknown function DUF1722 P40_21605 f7a99f765b4197b4c6bbf221367ac006 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21605 f7a99f765b4197b4c6bbf221367ac006 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21605 f7a99f765b4197b4c6bbf221367ac006 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21605 f7a99f765b4197b4c6bbf221367ac006 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_21605 f7a99f765b4197b4c6bbf221367ac006 269 Gene3D G3DSA:3.40.50.720 1 259 5.7E-67 T 13-10-2018 P40_21605 f7a99f765b4197b4c6bbf221367ac006 269 Pfam PF00106 short chain dehydrogenase 8 198 2.3E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21605 f7a99f765b4197b4c6bbf221367ac006 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.5E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21605 f7a99f765b4197b4c6bbf221367ac006 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.5E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21605 f7a99f765b4197b4c6bbf221367ac006 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.5E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21605 f7a99f765b4197b4c6bbf221367ac006 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.5E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21605 f7a99f765b4197b4c6bbf221367ac006 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.5E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21605 f7a99f765b4197b4c6bbf221367ac006 269 SUPERFAMILY SSF51735 1 263 1.35E-66 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_19755 e2846ab0988ab05f78e1a1c997ac59f9 300 Gene3D G3DSA:3.30.70.270 131 299 9.3E-21 T 13-10-2018 P40_19755 e2846ab0988ab05f78e1a1c997ac59f9 300 SUPERFAMILY SSF55073 158 294 1.49E-16 T 13-10-2018 IPR029787 Nucleotide cyclase P40_19755 e2846ab0988ab05f78e1a1c997ac59f9 300 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 158 294 1.7E-13 T 13-10-2018 IPR000160 GGDEF domain P40_19755 e2846ab0988ab05f78e1a1c997ac59f9 300 Pfam PF00990 Diguanylate cyclase, GGDEF domain 147 294 1.6E-17 T 13-10-2018 IPR000160 GGDEF domain P40_19755 e2846ab0988ab05f78e1a1c997ac59f9 300 SMART SM00267 134 300 3.0E-8 T 13-10-2018 IPR000160 GGDEF domain P40_20345 042a585d2e837ade4f04773079dc244f 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 P40_20345 042a585d2e837ade4f04773079dc244f 112 Gene3D G3DSA:3.30.70.120 1 112 3.6E-46 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal P40_20345 042a585d2e837ade4f04773079dc244f 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.3E-43 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 P40_20345 042a585d2e837ade4f04773079dc244f 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 P40_20345 042a585d2e837ade4f04773079dc244f 112 PRINTS PR00340 P-II protein signature 52 75 2.5E-43 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 P40_20345 042a585d2e837ade4f04773079dc244f 112 PRINTS PR00340 P-II protein signature 23 41 2.5E-43 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 P40_20345 042a585d2e837ade4f04773079dc244f 112 PRINTS PR00340 P-II protein signature 2 17 2.5E-43 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 P40_20345 042a585d2e837ade4f04773079dc244f 112 PRINTS PR00340 P-II protein signature 83 103 2.5E-43 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 P40_20345 042a585d2e837ade4f04773079dc244f 112 SUPERFAMILY SSF54913 1 112 1.78E-45 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta P40_20345 042a585d2e837ade4f04773079dc244f 112 PIRSF PIRSF039144 1 112 2.6E-56 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 P40_20345 042a585d2e837ade4f04773079dc244f 112 SMART SM00938 4 105 4.5E-67 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 P40_05365 9c83d3cdb60842f594d187f308572d3e 204 SUPERFAMILY SSF52833 48 188 6.5E-6 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_05365 9c83d3cdb60842f594d187f308572d3e 204 Gene3D G3DSA:3.40.30.10 46 190 2.7E-7 T 13-10-2018 P40_14370 15f8d27fa2b788dc4cfaadb78a3dc176 255 Pfam PF01925 Sulfite exporter TauE/SafE 14 247 7.6E-34 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 P40_03820 f27038762e5b61b03d4d28b81c112019 525 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 483 8.4E-45 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_03820 f27038762e5b61b03d4d28b81c112019 525 Gene3D G3DSA:1.10.287.950 215 518 7.3E-84 T 13-10-2018 P40_03820 f27038762e5b61b03d4d28b81c112019 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 3.1E-46 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_03820 f27038762e5b61b03d4d28b81c112019 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 3.1E-46 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_03820 f27038762e5b61b03d4d28b81c112019 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 3.1E-46 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_03820 f27038762e5b61b03d4d28b81c112019 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 3.1E-46 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_03820 f27038762e5b61b03d4d28b81c112019 525 SUPERFAMILY SSF58104 236 517 2.88E-69 T 13-10-2018 P40_03820 f27038762e5b61b03d4d28b81c112019 525 SMART SM00304 214 268 6.3E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_03820 f27038762e5b61b03d4d28b81c112019 525 SMART SM00283 269 516 1.0E-82 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_03820 f27038762e5b61b03d4d28b81c112019 525 Pfam PF00672 HAMP domain 215 263 5.6E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_17590 7ac9fb6f0d87dfd6b8efb9a7bf912f24 961 SUPERFAMILY SSF69279 199 381 3.57E-10 T 13-10-2018 P40_17590 7ac9fb6f0d87dfd6b8efb9a7bf912f24 961 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 723 878 1.7E-35 T 13-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal P40_17590 7ac9fb6f0d87dfd6b8efb9a7bf912f24 961 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 557 662 3.5E-37 T 13-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain P40_17590 7ac9fb6f0d87dfd6b8efb9a7bf912f24 961 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 1 490 4.3E-81 T 13-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset P40_17590 7ac9fb6f0d87dfd6b8efb9a7bf912f24 961 Gene3D G3DSA:3.30.1920.30 215 279 1.2E-57 T 13-10-2018 P40_17590 7ac9fb6f0d87dfd6b8efb9a7bf912f24 961 Gene3D G3DSA:2.30.110.50 2 323 1.2E-57 T 13-10-2018 P40_17590 7ac9fb6f0d87dfd6b8efb9a7bf912f24 961 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 3 490 3.6E-61 T 13-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein P40_17590 7ac9fb6f0d87dfd6b8efb9a7bf912f24 961 Gene3D G3DSA:3.55.50.10 78 179 1.2E-57 T 13-10-2018 P40_17590 7ac9fb6f0d87dfd6b8efb9a7bf912f24 961 Gene3D G3DSA:2.40.50.230 385 490 2.3E-36 T 13-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily P40_17590 7ac9fb6f0d87dfd6b8efb9a7bf912f24 961 SUPERFAMILY SSF69279 1 171 1.11E-40 T 13-10-2018 P40_17590 7ac9fb6f0d87dfd6b8efb9a7bf912f24 961 SUPERFAMILY SSF69255 391 486 4.71E-27 T 13-10-2018 P40_17590 7ac9fb6f0d87dfd6b8efb9a7bf912f24 961 Pfam PF05954 Phage late control gene D protein (GPD) 10 325 8.2E-62 T 13-10-2018 P40_06450 a48e0e75a997ab4322fb8bc8b673f9a9 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 P40_06450 a48e0e75a997ab4322fb8bc8b673f9a9 262 Gene3D G3DSA:3.90.226.10 1 202 8.1E-75 T 13-10-2018 P40_06450 a48e0e75a997ab4322fb8bc8b673f9a9 262 SUPERFAMILY SSF52096 1 234 1.44E-68 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_06450 a48e0e75a997ab4322fb8bc8b673f9a9 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 223 7.0E-42 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_03105 bdf7403d23d941314d915b576b5e6bd5 268 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 199 254 4.0E-14 T 13-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 P40_03105 bdf7403d23d941314d915b576b5e6bd5 268 Pfam PF00149 Calcineurin-like phosphoesterase 9 199 1.2E-16 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 P40_03105 bdf7403d23d941314d915b576b5e6bd5 268 Gene3D G3DSA:3.60.21.10 2 265 1.4E-73 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like P40_03105 bdf7403d23d941314d915b576b5e6bd5 268 SUPERFAMILY SSF56300 9 263 6.23E-55 T 13-10-2018 P40_03105 bdf7403d23d941314d915b576b5e6bd5 268 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 8 254 37.668 T 13-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 P40_12140 c2d42f55cb56ebdc35e4fe38b7f4ecf9 1296 Pfam PF02514 CobN/Magnesium Chelatase 125 1177 4.7E-288 T 13-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 P40_12135 0ba9c87858bdf6c3bbada5ed3ff84a6f 616 Gene3D G3DSA:2.40.170.20 134 616 7.3E-126 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_12135 0ba9c87858bdf6c3bbada5ed3ff84a6f 616 Gene3D G3DSA:2.170.130.10 2 128 7.2E-41 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_12135 0ba9c87858bdf6c3bbada5ed3ff84a6f 616 Pfam PF07715 TonB-dependent Receptor Plug Domain 15 123 1.3E-26 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_12135 0ba9c87858bdf6c3bbada5ed3ff84a6f 616 Pfam PF00593 TonB dependent receptor 215 614 3.3E-59 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_12135 0ba9c87858bdf6c3bbada5ed3ff84a6f 616 SUPERFAMILY SSF56935 4 616 1.45E-124 T 13-10-2018 P40_09065 a496cdab715efc843b8d711c12b24bbe 437 TIGRFAM TIGR00836 amt: ammonium transporter 33 435 3.7E-132 T 13-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 P40_09065 a496cdab715efc843b8d711c12b24bbe 437 Gene3D G3DSA:1.10.3430.10 22 437 1.2E-138 T 13-10-2018 IPR029020 Ammonium/urea transporter P40_09065 a496cdab715efc843b8d711c12b24bbe 437 SUPERFAMILY SSF111352 29 416 2.09E-127 T 13-10-2018 P40_09065 a496cdab715efc843b8d711c12b24bbe 437 Pfam PF00909 Ammonium Transporter Family 35 435 1.4E-113 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 P40_18355 9cbddf8c025af33ed31d9b7cdcf8230d 228 Gene3D G3DSA:3.30.70.1070 115 183 1.9E-8 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 P40_18355 9cbddf8c025af33ed31d9b7cdcf8230d 228 SUPERFAMILY SSF110997 150 202 4.71E-5 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 P40_18355 9cbddf8c025af33ed31d9b7cdcf8230d 228 SUPERFAMILY SSF110997 71 144 7.98E-12 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 P40_18355 9cbddf8c025af33ed31d9b7cdcf8230d 228 Pfam PF05036 Sporulation related domain 74 144 1.6E-8 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 P40_20950 471b1392798302e9bc42a92eee4fb355 296 Gene3D G3DSA:1.10.1040.10 164 296 2.7E-46 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 P40_20950 471b1392798302e9bc42a92eee4fb355 296 SUPERFAMILY SSF48179 162 293 2.04E-40 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_20950 471b1392798302e9bc42a92eee4fb355 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 290 3.4E-34 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 P40_20950 471b1392798302e9bc42a92eee4fb355 296 SUPERFAMILY SSF51735 1 161 1.73E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_20950 471b1392798302e9bc42a92eee4fb355 296 Gene3D G3DSA:3.40.50.720 1 163 2.2E-52 T 13-10-2018 P40_20950 471b1392798302e9bc42a92eee4fb355 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 159 1.0E-45 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 P40_20950 471b1392798302e9bc42a92eee4fb355 296 PIRSF PIRSF000103 1 296 7.7E-77 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 P40_20950 471b1392798302e9bc42a92eee4fb355 296 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 5 291 1.3E-127 T 13-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 P40_18570 c3a86af46d8d26c1a93d61b01bb259f0 494 Pfam PF07690 Major Facilitator Superfamily 14 406 2.5E-57 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_18570 c3a86af46d8d26c1a93d61b01bb259f0 494 Gene3D G3DSA:1.20.1250.20 255 487 5.4E-14 T 13-10-2018 P40_18570 c3a86af46d8d26c1a93d61b01bb259f0 494 Gene3D G3DSA:1.20.1720.10 11 245 1.8E-54 T 13-10-2018 P40_18570 c3a86af46d8d26c1a93d61b01bb259f0 494 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 1.3E-7 T 13-10-2018 P40_18570 c3a86af46d8d26c1a93d61b01bb259f0 494 PRINTS PR01036 Tetracycline resistance protein TetB signature 258 283 1.3E-7 T 13-10-2018 P40_18570 c3a86af46d8d26c1a93d61b01bb259f0 494 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 1.3E-7 T 13-10-2018 P40_18570 c3a86af46d8d26c1a93d61b01bb259f0 494 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 1.3E-7 T 13-10-2018 P40_18570 c3a86af46d8d26c1a93d61b01bb259f0 494 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 1.3E-7 T 13-10-2018 P40_18570 c3a86af46d8d26c1a93d61b01bb259f0 494 SUPERFAMILY SSF103473 7 490 4.84E-71 T 13-10-2018 IPR036259 MFS transporter superfamily P40_18570 c3a86af46d8d26c1a93d61b01bb259f0 494 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 10 469 7.5E-129 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 SMART SM00493 2 125 1.8E-19 T 13-10-2018 IPR006171 TOPRIM domain P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 Pfam PF01131 DNA topoisomerase 153 603 2.3E-115 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 Gene3D G3DSA:2.70.20.10 214 499 2.0E-153 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 Gene3D G3DSA:1.10.460.10 160 612 2.0E-153 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 9.7E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 190 208 9.7E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 9.7E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 404 420 9.7E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 532 546 9.7E-25 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 704 4.5E-216 T 13-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 Pfam PF01751 Toprim domain 4 131 1.1E-14 T 13-10-2018 IPR006171 TOPRIM domain P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 Gene3D G3DSA:3.40.50.140 2 152 1.3E-49 T 13-10-2018 P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 SMART SM00436 125 220 1.5E-37 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 Gene3D G3DSA:1.10.290.10 287 418 2.0E-153 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 330 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 SUPERFAMILY SSF56712 3 618 1.24E-176 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain P40_10255 5e50cec0ad1f4c1adf4b166289dd6853 711 SMART SM00437 278 569 1.5E-57 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 P40_02790 f51d47f1f844dbdee3c278b5af45cbac 175 Pfam PF02391 MoaE protein 11 122 4.1E-36 T 13-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 P40_02790 f51d47f1f844dbdee3c278b5af45cbac 175 SUPERFAMILY SSF54690 8 141 7.72E-42 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 P40_02790 f51d47f1f844dbdee3c278b5af45cbac 175 Gene3D G3DSA:3.90.1170.40 1 139 6.2E-47 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 P40_16050 9e66a8e90d67b21f4f674008aa033d7c 151 PRINTS PR01004 Flagellar FliJ protein signature 126 146 9.3E-12 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 P40_16050 9e66a8e90d67b21f4f674008aa033d7c 151 PRINTS PR01004 Flagellar FliJ protein signature 4 26 9.3E-12 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 P40_16050 9e66a8e90d67b21f4f674008aa033d7c 151 PRINTS PR01004 Flagellar FliJ protein signature 63 84 9.3E-12 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 P40_16050 9e66a8e90d67b21f4f674008aa033d7c 151 PRINTS PR01004 Flagellar FliJ protein signature 27 43 9.3E-12 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 P40_16050 9e66a8e90d67b21f4f674008aa033d7c 151 PRINTS PR01004 Flagellar FliJ protein signature 86 107 9.3E-12 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 P40_16050 9e66a8e90d67b21f4f674008aa033d7c 151 PRINTS PR01004 Flagellar FliJ protein signature 44 61 9.3E-12 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 P40_16050 9e66a8e90d67b21f4f674008aa033d7c 151 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 144 3.6E-26 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 P40_16050 9e66a8e90d67b21f4f674008aa033d7c 151 Pfam PF02050 Flagellar FliJ protein 19 140 4.8E-26 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 P40_16050 9e66a8e90d67b21f4f674008aa033d7c 151 PIRSF PIRSF019404 1 147 1.2E-37 T 13-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 P40_20530 cc4a43482ed4699dbc8253e328b87c66 430 SUPERFAMILY SSF56645 26 272 1.18E-58 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_20530 cc4a43482ed4699dbc8253e328b87c66 430 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 147 1.1E-9 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_20530 cc4a43482ed4699dbc8253e328b87c66 430 SUPERFAMILY SSF47203 260 425 9.02E-42 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_20530 cc4a43482ed4699dbc8253e328b87c66 430 PIRSF PIRSF016578 55 104 19.0 T 13-10-2018 P40_20530 cc4a43482ed4699dbc8253e328b87c66 430 PIRSF PIRSF016578 271 414 2.3E-7 T 13-10-2018 P40_20530 cc4a43482ed4699dbc8253e328b87c66 430 PIRSF PIRSF016578 163 230 8.4E-4 T 13-10-2018 P40_20530 cc4a43482ed4699dbc8253e328b87c66 430 Gene3D G3DSA:1.20.140.10 266 417 3.9E-37 T 13-10-2018 P40_20530 cc4a43482ed4699dbc8253e328b87c66 430 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 151 234 2.8E-22 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_20530 cc4a43482ed4699dbc8253e328b87c66 430 Gene3D G3DSA:2.40.110.10 151 265 4.2E-32 T 13-10-2018 P40_20530 cc4a43482ed4699dbc8253e328b87c66 430 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 262 414 1.2E-37 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_20530 cc4a43482ed4699dbc8253e328b87c66 430 Gene3D G3DSA:1.10.540.10 1 149 1.5E-20 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_03995 71f0f9a6b5f16c03e7ea1a21a2074b83 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 32 142 8.4E-22 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 P40_03995 71f0f9a6b5f16c03e7ea1a21a2074b83 156 Pfam PF03061 Thioesterase superfamily 60 135 2.2E-13 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_03995 71f0f9a6b5f16c03e7ea1a21a2074b83 156 SUPERFAMILY SSF54637 14 139 4.03E-31 T 13-10-2018 IPR029069 HotDog domain superfamily P40_03995 71f0f9a6b5f16c03e7ea1a21a2074b83 156 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 32 144 3.7E-47 T 13-10-2018 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 P40_03995 71f0f9a6b5f16c03e7ea1a21a2074b83 156 Gene3D G3DSA:3.10.129.10 14 156 2.1E-51 T 13-10-2018 P40_12005 92f3c29f76acc844db05d57e107a721f 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 257 8.4E-67 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_12005 92f3c29f76acc844db05d57e107a721f 258 Gene3D G3DSA:1.10.12.10 201 258 6.0E-16 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_12005 92f3c29f76acc844db05d57e107a721f 258 Gene3D G3DSA:3.90.226.10 1 198 7.7E-67 T 13-10-2018 P40_12005 92f3c29f76acc844db05d57e107a721f 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 P40_12005 92f3c29f76acc844db05d57e107a721f 258 SUPERFAMILY SSF52096 1 258 6.64E-84 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_18115 50f94c614d0c9bcced0d11cca5c9ff2f 571 Pfam PF01740 STAS domain 470 566 3.7E-10 T 13-10-2018 IPR002645 STAS domain P40_18115 50f94c614d0c9bcced0d11cca5c9ff2f 571 Gene3D G3DSA:3.30.750.24 460 569 3.1E-21 T 13-10-2018 IPR036513 STAS domain superfamily P40_18115 50f94c614d0c9bcced0d11cca5c9ff2f 571 TIGRFAM TIGR00815 sulP: sulfate permease 21 566 2.7E-114 T 13-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 P40_18115 50f94c614d0c9bcced0d11cca5c9ff2f 571 SUPERFAMILY SSF52091 464 570 8.63E-15 T 13-10-2018 IPR036513 STAS domain superfamily P40_18115 50f94c614d0c9bcced0d11cca5c9ff2f 571 Pfam PF00916 Sulfate permease family 29 412 8.1E-76 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 P40_02655 a66963290cb2f7a0c72323d157349470 309 Gene3D G3DSA:1.10.620.20 29 187 5.9E-6 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 P40_02655 a66963290cb2f7a0c72323d157349470 309 SUPERFAMILY SSF47240 12 246 1.59E-44 T 13-10-2018 IPR009078 Ferritin-like superfamily P40_07655 abf4f597f0d2e5a7185b1a4cfe7e534f 260 SUPERFAMILY SSF51735 4 259 3.89E-77 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_07655 abf4f597f0d2e5a7185b1a4cfe7e534f 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 258 6.1E-66 T 13-10-2018 P40_07655 abf4f597f0d2e5a7185b1a4cfe7e534f 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_07655 abf4f597f0d2e5a7185b1a4cfe7e534f 260 Gene3D G3DSA:3.40.50.720 2 259 2.1E-79 T 13-10-2018 P40_07655 abf4f597f0d2e5a7185b1a4cfe7e534f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.8E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07655 abf4f597f0d2e5a7185b1a4cfe7e534f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.8E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07655 abf4f597f0d2e5a7185b1a4cfe7e534f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 2.8E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07655 abf4f597f0d2e5a7185b1a4cfe7e534f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.8E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07655 abf4f597f0d2e5a7185b1a4cfe7e534f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.8E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07655 abf4f597f0d2e5a7185b1a4cfe7e534f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.8E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07655 abf4f597f0d2e5a7185b1a4cfe7e534f 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07655 abf4f597f0d2e5a7185b1a4cfe7e534f 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07655 abf4f597f0d2e5a7185b1a4cfe7e534f 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_10850 a9cfca36105baf15915097e8e8cc7b4b 554 Pfam PF03109 ABC1 family 117 235 2.1E-35 T 13-10-2018 IPR004147 UbiB domain P40_10850 a9cfca36105baf15915097e8e8cc7b4b 554 SUPERFAMILY SSF56112 99 431 2.18E-22 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_14485 68d44100e7a3638b7c183fddbb5d99e3 198 Gene3D G3DSA:1.10.357.10 1 195 4.4E-24 T 13-10-2018 P40_14485 68d44100e7a3638b7c183fddbb5d99e3 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 4.8E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_14485 68d44100e7a3638b7c183fddbb5d99e3 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 4.8E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_14485 68d44100e7a3638b7c183fddbb5d99e3 198 SUPERFAMILY SSF46689 7 87 4.51E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_14485 68d44100e7a3638b7c183fddbb5d99e3 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 1.8E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_00120 43db7ffa837096ff4094867ac9c62922 464 SUPERFAMILY SSF55103 223 463 5.56E-60 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 P40_00120 43db7ffa837096ff4094867ac9c62922 464 Gene3D G3DSA:3.30.70.2740 336 421 2.7E-27 T 13-10-2018 P40_00120 43db7ffa837096ff4094867ac9c62922 464 Gene3D G3DSA:1.10.45.10 422 461 4.4E-13 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 P40_00120 43db7ffa837096ff4094867ac9c62922 464 Pfam PF01565 FAD binding domain 42 180 6.4E-40 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 P40_00120 43db7ffa837096ff4094867ac9c62922 464 Gene3D G3DSA:3.30.465.40 7 222 1.3E-67 T 13-10-2018 P40_00120 43db7ffa837096ff4094867ac9c62922 464 SUPERFAMILY SSF56176 7 218 9.35E-68 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 P40_00120 43db7ffa837096ff4094867ac9c62922 464 Gene3D G3DSA:3.30.70.2190 223 333 9.5E-25 T 13-10-2018 P40_00120 43db7ffa837096ff4094867ac9c62922 464 Pfam PF02913 FAD linked oxidases, C-terminal domain 218 461 2.3E-62 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 P40_18780 85fc4faf6eac5cf58dffc2d37d76c9ab 98 Hamap MF_00460 Protein RnfH [rnfH]. 5 97 23.455 T 13-10-2018 IPR005346 RnfH protein P40_18780 85fc4faf6eac5cf58dffc2d37d76c9ab 98 SUPERFAMILY SSF54285 4 80 7.72E-21 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp P40_18780 85fc4faf6eac5cf58dffc2d37d76c9ab 98 Pfam PF03658 RnfH family Ubiquitin 5 89 2.0E-29 T 13-10-2018 IPR005346 RnfH protein P40_18780 85fc4faf6eac5cf58dffc2d37d76c9ab 98 Gene3D G3DSA:3.10.20.280 1 90 2.4E-28 T 13-10-2018 IPR037021 RnfH superfamily P40_04825 9fa9b42e610ea657155c783015d0f108 93 PRINTS PR01591 DNA-binding protein FIS signature 37 52 2.5E-10 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 P40_04825 9fa9b42e610ea657155c783015d0f108 93 PRINTS PR01591 DNA-binding protein FIS signature 21 37 2.5E-10 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 P40_04825 9fa9b42e610ea657155c783015d0f108 93 PRINTS PR01591 DNA-binding protein FIS signature 52 64 2.5E-10 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 P40_04825 9fa9b42e610ea657155c783015d0f108 93 PIRSF PIRSF002097 2 93 5.2E-37 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 P40_04825 9fa9b42e610ea657155c783015d0f108 93 SUPERFAMILY SSF46689 12 92 7.17E-24 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_04825 9fa9b42e610ea657155c783015d0f108 93 Pfam PF02954 Bacterial regulatory protein, Fis family 50 90 1.1E-15 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_04825 9fa9b42e610ea657155c783015d0f108 93 Gene3D G3DSA:1.10.10.60 2 92 3.2E-29 T 13-10-2018 P40_04825 9fa9b42e610ea657155c783015d0f108 93 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 73 93 6.3E-15 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_04825 9fa9b42e610ea657155c783015d0f108 93 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 56 73 6.3E-15 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_06550 e14cdda09ec9cfb30f650ae83527e9e0 306 SUPERFAMILY SSF52151 13 281 1.17E-53 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase P40_06550 e14cdda09ec9cfb30f650ae83527e9e0 306 Gene3D G3DSA:3.40.1090.10 103 198 9.6E-16 T 13-10-2018 P40_06550 e14cdda09ec9cfb30f650ae83527e9e0 306 Gene3D G3DSA:3.40.1090.10 2 102 1.5E-22 T 13-10-2018 P40_06550 e14cdda09ec9cfb30f650ae83527e9e0 306 Pfam PF01734 Patatin-like phospholipase 17 73 1.1E-10 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 P40_06550 e14cdda09ec9cfb30f650ae83527e9e0 306 Pfam PF01734 Patatin-like phospholipase 122 175 3.3E-10 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 P40_09620 7584132b4a70cbf9b28645f65744774a 245 Gene3D G3DSA:3.40.50.720 2 244 4.7E-62 T 13-10-2018 P40_09620 7584132b4a70cbf9b28645f65744774a 245 SUPERFAMILY SSF51735 4 244 4.65E-61 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_09620 7584132b4a70cbf9b28645f65744774a 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 242 1.1E-49 T 13-10-2018 P40_09620 7584132b4a70cbf9b28645f65744774a 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_09620 7584132b4a70cbf9b28645f65744774a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 7.9E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09620 7584132b4a70cbf9b28645f65744774a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 7.9E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09620 7584132b4a70cbf9b28645f65744774a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 7.9E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09620 7584132b4a70cbf9b28645f65744774a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.9E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09620 7584132b4a70cbf9b28645f65744774a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 7.9E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09620 7584132b4a70cbf9b28645f65744774a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 7.9E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 SMART SM00722 193 367 4.5E-24 T 13-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 SMART SM00722 34 187 3.5E-21 T 13-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 35 420 7.6E-139 T 13-10-2018 IPR026464 Nitrous oxide reductase family maturation protein NosD P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 SMART SM00710 137 166 26.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 SMART SM00710 167 188 4.6 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 SMART SM00710 256 282 4000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 SMART SM00710 315 353 2500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 SMART SM00710 211 232 3900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 SMART SM00710 189 210 980.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 SMART SM00710 292 313 140.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 SMART SM00710 115 136 1.1 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 SMART SM00710 85 113 260.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 Gene3D G3DSA:2.160.20.10 226 354 3.9E-10 T 13-10-2018 IPR012334 Pectin lyase fold P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 Pfam PF05048 Periplasmic copper-binding protein (NosD) 144 383 2.2E-69 T 13-10-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 Gene3D G3DSA:2.160.20.10 50 225 3.6E-15 T 13-10-2018 IPR012334 Pectin lyase fold P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 288 329 3.9E-6 T 13-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 183 220 1.3E-5 T 13-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 161 200 6.8E-7 T 13-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 P40_20840 cc51e35c941fad10c0d7ba8ed7bac3f3 433 SUPERFAMILY SSF51126 21 407 3.38E-52 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor P40_04375 a0165459f26054e0896855572f498751 595 Gene3D G3DSA:1.10.540.10 27 160 9.1E-17 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_04375 a0165459f26054e0896855572f498751 595 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 35 3.3E-9 T 13-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria P40_04375 a0165459f26054e0896855572f498751 595 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 471 591 1.6E-30 T 13-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain P40_04375 a0165459f26054e0896855572f498751 595 Gene3D G3DSA:1.20.140.10 291 460 6.4E-44 T 13-10-2018 P40_04375 a0165459f26054e0896855572f498751 595 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 286 457 5.0E-19 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_04375 a0165459f26054e0896855572f498751 595 Gene3D G3DSA:2.40.110.10 161 290 1.3E-28 T 13-10-2018 P40_04375 a0165459f26054e0896855572f498751 595 SUPERFAMILY SSF56645 40 284 1.83E-56 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_04375 a0165459f26054e0896855572f498751 595 SUPERFAMILY SSF47203 291 475 3.54E-47 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_04375 a0165459f26054e0896855572f498751 595 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 275 7.1E-19 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_04375 a0165459f26054e0896855572f498751 595 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 158 1.5E-11 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_12390 c565835445edfefe4aea31598a03304b 299 SUPERFAMILY SSF50998 37 242 5.18E-6 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily P40_12390 c565835445edfefe4aea31598a03304b 299 Gene3D G3DSA:2.130.10.10 141 299 3.3E-6 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_18995 3497e83115bc347bd3e458267f4a6b48 402 Gene3D G3DSA:1.20.1250.20 202 387 4.1E-17 T 13-10-2018 P40_18995 3497e83115bc347bd3e458267f4a6b48 402 SUPERFAMILY SSF103473 11 388 7.46E-44 T 13-10-2018 IPR036259 MFS transporter superfamily P40_18995 3497e83115bc347bd3e458267f4a6b48 402 Pfam PF07690 Major Facilitator Superfamily 31 322 6.1E-22 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_18995 3497e83115bc347bd3e458267f4a6b48 402 Gene3D G3DSA:1.20.1250.20 9 194 2.3E-15 T 13-10-2018 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 Gene3D G3DSA:3.30.70.380 698 791 6.7E-29 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 Gene3D G3DSA:3.30.930.10 487 687 1.9E-59 T 13-10-2018 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 790 5.2E-251 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 Pfam PF03147 Ferredoxin-fold anticodon binding domain 697 790 1.9E-29 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 Gene3D G3DSA:3.30.56.10 400 475 3.9E-24 T 13-10-2018 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 Gene3D G3DSA:3.50.40.10 197 393 4.5E-79 T 13-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 Pfam PF03483 B3/4 domain 211 384 7.5E-69 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 Pfam PF01588 Putative tRNA binding domain 45 144 8.4E-24 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 784 45.177 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 SMART SM00873 211 384 3.3E-96 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 SUPERFAMILY SSF55681 467 686 4.17E-49 T 13-10-2018 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 SMART SM00896 697 790 2.6E-39 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 Gene3D G3DSA:2.40.50.140 39 153 7.6E-70 T 13-10-2018 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 SUPERFAMILY SSF54991 691 790 1.16E-29 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.2E-19 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 SUPERFAMILY SSF46955 404 475 3.48E-18 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 Gene3D G3DSA:3.30.56.10 6 179 7.6E-70 T 13-10-2018 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 SUPERFAMILY SSF56037 194 390 1.18E-74 T 13-10-2018 P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 SUPERFAMILY SSF50249 36 195 6.61E-49 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_14950 19b2b5d8c795cfa8366c7c1864620e91 791 SMART SM00874 402 471 4.9E-28 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 P40_05620 d0ece73d1f2a878434273347362fb932 119 Gene3D G3DSA:1.10.260.40 5 88 3.2E-9 T 13-10-2018 P40_05620 d0ece73d1f2a878434273347362fb932 119 SMART SM00530 11 66 0.0042 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_05620 d0ece73d1f2a878434273347362fb932 119 SUPERFAMILY SSF47413 7 68 7.41E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_07380 8bc9bb3dbddece7cf9892bd58b517b22 176 Pfam PF14345 GDYXXLXY protein 17 161 4.6E-31 T 13-10-2018 IPR025833 GDYXXLXY protein P40_00580 8799b7373c6eec420715745428ab9888 420 SMART SM00388 215 277 1.0E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_00580 8799b7373c6eec420715745428ab9888 420 SUPERFAMILY SSF55874 268 419 6.55E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_00580 8799b7373c6eec420715745428ab9888 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 5.6E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_00580 8799b7373c6eec420715745428ab9888 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 5.6E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_00580 8799b7373c6eec420715745428ab9888 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 420 5.6E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_00580 8799b7373c6eec420715745428ab9888 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 401 5.6E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_00580 8799b7373c6eec420715745428ab9888 420 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 419 7.1E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_00580 8799b7373c6eec420715745428ab9888 420 SUPERFAMILY SSF47384 198 276 1.08E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_00580 8799b7373c6eec420715745428ab9888 420 Gene3D G3DSA:1.10.287.130 155 278 3.6E-20 T 13-10-2018 P40_00580 8799b7373c6eec420715745428ab9888 420 SMART SM00387 320 420 4.0E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_00580 8799b7373c6eec420715745428ab9888 420 Gene3D G3DSA:3.30.565.10 280 420 1.1E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_00580 8799b7373c6eec420715745428ab9888 420 Pfam PF00512 His Kinase A (phospho-acceptor) domain 217 276 1.7E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_09480 0f4ad4f762338333556328064aa2ec11 203 Gene3D G3DSA:2.50.20.10 18 201 1.4E-50 T 13-10-2018 P40_09480 0f4ad4f762338333556328064aa2ec11 203 SUPERFAMILY SSF89392 20 202 3.26E-46 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX P40_09480 0f4ad4f762338333556328064aa2ec11 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 30 192 1.5E-41 T 13-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like P40_09480 0f4ad4f762338333556328064aa2ec11 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 5 201 4.4E-22 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 P40_09480 0f4ad4f762338333556328064aa2ec11 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 202 26.947 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 P40_01575 205be73fb6287324c71bf052b0161bb0 328 SUPERFAMILY SSF50129 1 155 1.83E-29 T 13-10-2018 IPR011032 GroES-like superfamily P40_01575 205be73fb6287324c71bf052b0161bb0 328 Gene3D G3DSA:3.90.180.10 18 313 7.3E-90 T 13-10-2018 P40_01575 205be73fb6287324c71bf052b0161bb0 328 Pfam PF13602 Zinc-binding dehydrogenase 190 313 4.2E-23 T 13-10-2018 P40_01575 205be73fb6287324c71bf052b0161bb0 328 SUPERFAMILY SSF51735 121 288 1.09E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_01575 205be73fb6287324c71bf052b0161bb0 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 93 2.8E-5 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P40_01575 205be73fb6287324c71bf052b0161bb0 328 SMART SM00829 10 313 3.9E-16 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P40_01575 205be73fb6287324c71bf052b0161bb0 328 Gene3D G3DSA:3.40.50.720 132 264 7.3E-90 T 13-10-2018 P40_07945 9ef137c3260a5047dc32e7e81db86719 306 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 251 2.6E-40 T 13-10-2018 P40_07945 9ef137c3260a5047dc32e7e81db86719 306 SUPERFAMILY SSF51735 7 259 4.31E-62 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_07945 9ef137c3260a5047dc32e7e81db86719 306 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 206 2.8E-7 T 13-10-2018 P40_07945 9ef137c3260a5047dc32e7e81db86719 306 Gene3D G3DSA:3.40.50.720 6 295 4.3E-70 T 13-10-2018 P40_07945 9ef137c3260a5047dc32e7e81db86719 306 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_07945 9ef137c3260a5047dc32e7e81db86719 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.3E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07945 9ef137c3260a5047dc32e7e81db86719 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.3E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07945 9ef137c3260a5047dc32e7e81db86719 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.3E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07945 9ef137c3260a5047dc32e7e81db86719 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.3E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07945 9ef137c3260a5047dc32e7e81db86719 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 1.3E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07945 9ef137c3260a5047dc32e7e81db86719 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 1.3E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07945 9ef137c3260a5047dc32e7e81db86719 306 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 4.0E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07945 9ef137c3260a5047dc32e7e81db86719 306 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 4.0E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_17980 c8ccd34f2a0067e5305586215f12f483 129 Pfam PF01124 MAPEG family 5 119 2.1E-17 T 13-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein P40_17980 c8ccd34f2a0067e5305586215f12f483 129 Gene3D G3DSA:1.20.120.550 1 129 6.9E-39 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily P40_17980 c8ccd34f2a0067e5305586215f12f483 129 SUPERFAMILY SSF161084 3 127 3.53E-38 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily P40_07735 3f6a0e3f52e84a4166198379f3bf31b9 242 SUPERFAMILY SSF81296 159 241 1.23E-13 T 13-10-2018 IPR014756 Immunoglobulin E-set P40_07735 3f6a0e3f52e84a4166198379f3bf31b9 242 Pfam PF08770 Sulphur oxidation protein SoxZ 164 240 1.1E-11 T 13-10-2018 IPR014880 Sulphur oxidation protein SoxZ P40_07735 3f6a0e3f52e84a4166198379f3bf31b9 242 Gene3D G3DSA:2.60.40.2470 10 133 2.6E-19 T 13-10-2018 IPR038162 Ig-like SoxY domain superfamily P40_07735 3f6a0e3f52e84a4166198379f3bf31b9 242 TIGRFAM TIGR04557 fuse_rel_SoxYZ: quinoprotein dehydrogenase-associated SoxYZ-like carrier 23 238 6.4E-57 T 13-10-2018 IPR030831 Quinoprotein dehydrogenase-associated SoxYZ-like carrier P40_07735 3f6a0e3f52e84a4166198379f3bf31b9 242 Pfam PF13501 Sulfur oxidation protein SoxY 29 133 1.3E-23 T 13-10-2018 IPR032711 Ig-like SoxY domain P40_07735 3f6a0e3f52e84a4166198379f3bf31b9 242 Gene3D G3DSA:2.60.40.10 147 241 3.6E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold P40_19635 8b059eb6a4b796e21ed1873d622c486f 419 Gene3D G3DSA:3.40.50.300 130 417 2.2E-133 T 13-10-2018 P40_19635 8b059eb6a4b796e21ed1873d622c486f 419 SUPERFAMILY SSF50249 48 125 1.46E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_19635 8b059eb6a4b796e21ed1873d622c486f 419 SUPERFAMILY SSF52540 90 371 2.31E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_19635 8b059eb6a4b796e21ed1873d622c486f 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.5E-25 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_19635 8b059eb6a4b796e21ed1873d622c486f 419 SMART SM00959 5 47 2.1E-17 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 P40_19635 8b059eb6a4b796e21ed1873d622c486f 419 Gene3D G3DSA:1.10.720.10 1 47 2.2E-19 T 13-10-2018 P40_19635 8b059eb6a4b796e21ed1873d622c486f 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.4E-215 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 P40_19635 8b059eb6a4b796e21ed1873d622c486f 419 Gene3D G3DSA:2.40.50.140 48 117 2.4E-34 T 13-10-2018 P40_19635 8b059eb6a4b796e21ed1873d622c486f 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 2.9E-17 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 P40_19635 8b059eb6a4b796e21ed1873d622c486f 419 SMART SM00357 52 118 1.1E-18 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 P40_19635 8b059eb6a4b796e21ed1873d622c486f 419 SUPERFAMILY SSF68912 1 46 1.84E-12 T 13-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily P40_19635 8b059eb6a4b796e21ed1873d622c486f 419 SMART SM00382 170 355 3.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_19635 8b059eb6a4b796e21ed1873d622c486f 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 250.236 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 P40_19635 8b059eb6a4b796e21ed1873d622c486f 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 1.2E-31 T 13-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 P40_15085 46566e405c0db4cfe289b4af7b30e7f2 289 Pfam PF13103 TonB C terminal 197 275 9.6E-13 T 13-10-2018 P40_15085 46566e405c0db4cfe289b4af7b30e7f2 289 SUPERFAMILY SSF74653 194 286 1.57E-15 T 13-10-2018 P40_15085 46566e405c0db4cfe289b4af7b30e7f2 289 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 217 284 2.0E-9 T 13-10-2018 IPR006260 TonB/TolA, C-terminal P40_15085 46566e405c0db4cfe289b4af7b30e7f2 289 Gene3D G3DSA:3.30.1150.10 159 288 1.9E-26 T 13-10-2018 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 5 211 3.0E-80 T 13-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 PIRSF PIRSF001438 1 309 4.6E-122 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 5 296 7.3E-111 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 Gene3D G3DSA:3.40.190.10 5 209 1.5E-85 T 13-10-2018 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 Gene3D G3DSA:3.40.190.10 102 201 1.5E-85 T 13-10-2018 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 SUPERFAMILY SSF54782 219 307 1.2E-26 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 SUPERFAMILY SSF53850 4 218 1.3E-83 T 13-10-2018 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 13-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 4 296 39.247 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 Gene3D G3DSA:3.30.160.40 222 305 8.0E-27 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 294 2.5E-19 T 13-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 PRINTS PR00151 Porphobilinogen deaminase signature 44 64 3.1E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 PRINTS PR00151 Porphobilinogen deaminase signature 123 140 3.1E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 PRINTS PR00151 Porphobilinogen deaminase signature 142 159 3.1E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 3.1E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_19455 64dbf87e22e0f431032bf02a27ade3af 309 PRINTS PR00151 Porphobilinogen deaminase signature 75 94 3.1E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_07790 8737283aa37f3473e395fbe093213280 256 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 6 238 9.8E-56 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 P40_07790 8737283aa37f3473e395fbe093213280 256 SUPERFAMILY SSF64167 6 251 1.83E-67 T 13-10-2018 P40_07790 8737283aa37f3473e395fbe093213280 256 Gene3D G3DSA:3.40.1210.10 5 253 4.6E-76 T 13-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 P40_07790 8737283aa37f3473e395fbe093213280 256 Pfam PF01975 Survival protein SurE 7 186 9.4E-56 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 P40_07790 8737283aa37f3473e395fbe093213280 256 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 5 255 30.112 T 13-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 P40_03190 e841c303aaa815db400d6149425a9eba 306 SUPERFAMILY SSF69593 12 285 7.59E-47 T 13-10-2018 P40_03190 e841c303aaa815db400d6149425a9eba 306 SMART SM00563 85 227 6.0E-17 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_03190 e841c303aaa815db400d6149425a9eba 306 Pfam PF01553 Acyltransferase 72 226 2.0E-15 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_04400 cbe45e436b84e4f4ae0dc246a6e04c73 141 Gene3D G3DSA:3.30.420.270 67 134 4.7E-13 T 13-10-2018 P40_04400 cbe45e436b84e4f4ae0dc246a6e04c73 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 19 137 2.3E-28 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 P40_10910 9787da4728e28ebc06c7dda14808ecec 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 154 2.1E-15 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_10910 9787da4728e28ebc06c7dda14808ecec 171 SUPERFAMILY SSF88946 3 82 2.16E-14 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_10910 9787da4728e28ebc06c7dda14808ecec 171 Gene3D G3DSA:1.10.1740.10 1 65 1.8E-21 T 13-10-2018 P40_10910 9787da4728e28ebc06c7dda14808ecec 171 Pfam PF04542 Sigma-70 region 2 12 73 1.1E-9 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_10910 9787da4728e28ebc06c7dda14808ecec 171 Pfam PF08281 Sigma-70, region 4 101 151 5.6E-14 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_10910 9787da4728e28ebc06c7dda14808ecec 171 SUPERFAMILY SSF88659 99 156 2.4E-14 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_10910 9787da4728e28ebc06c7dda14808ecec 171 Gene3D G3DSA:1.10.10.10 96 156 3.6E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_05300 f76fc3580c36c38bd60a9ba2b3a08f28 193 Gene3D G3DSA:3.40.50.150 1 187 2.4E-14 T 13-10-2018 P40_05300 f76fc3580c36c38bd60a9ba2b3a08f28 193 Pfam PF06080 Protein of unknown function (DUF938) 3 192 1.3E-50 T 13-10-2018 IPR010342 Protein of unknown function DUF938 P40_05300 f76fc3580c36c38bd60a9ba2b3a08f28 193 SUPERFAMILY SSF53335 17 174 1.71E-19 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_02440 56a50922a809d5fd0b3b916c314beaa8 408 Pfam PF01471 Putative peptidoglycan binding domain 331 386 1.6E-13 T 13-10-2018 IPR002477 Peptidoglycan binding-like P40_02440 56a50922a809d5fd0b3b916c314beaa8 408 Gene3D G3DSA:1.10.101.10 322 388 9.9E-13 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 P40_02440 56a50922a809d5fd0b3b916c314beaa8 408 SUPERFAMILY SSF47090 323 388 1.88E-16 T 13-10-2018 IPR036365 PGBD-like superfamily P40_02440 56a50922a809d5fd0b3b916c314beaa8 408 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 19 315 6.3E-109 T 13-10-2018 IPR011970 Lytic murein transglycosylase P40_02440 56a50922a809d5fd0b3b916c314beaa8 408 Pfam PF13406 Transglycosylase SLT domain 20 311 8.1E-109 T 13-10-2018 IPR031304 Transglycosylase SLT domain 2 P40_02440 56a50922a809d5fd0b3b916c314beaa8 408 SUPERFAMILY SSF53955 11 317 4.5E-99 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily P40_02440 56a50922a809d5fd0b3b916c314beaa8 408 Gene3D G3DSA:1.10.8.350 34 195 2.1E-86 T 13-10-2018 P40_02440 56a50922a809d5fd0b3b916c314beaa8 408 Gene3D G3DSA:1.10.530.10 62 310 2.1E-86 T 13-10-2018 P40_10390 96dddafe43624c72f930e461236d4486 483 SUPERFAMILY SSF47240 111 350 4.87E-50 T 13-10-2018 IPR009078 Ferritin-like superfamily P40_10390 96dddafe43624c72f930e461236d4486 483 TIGRFAM TIGR03225 benzo_boxB: benzoyl-CoA oxygenase, B subunit 8 481 1.8E-270 T 13-10-2018 IPR017635 Benzoyl-CoA oxygenase, B subunit KEGG: 00362+1.14.13.208|MetaCyc: PWY-1361 P40_10390 96dddafe43624c72f930e461236d4486 483 Gene3D G3DSA:1.10.620.20 7 483 6.0E-227 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 P40_19245 e3de2fd5036c3ff956d66e86bcd7c1b5 278 Gene3D G3DSA:3.40.50.150 22 232 3.3E-27 T 13-10-2018 P40_19245 e3de2fd5036c3ff956d66e86bcd7c1b5 278 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 20 275 25.127 T 13-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 P40_19245 e3de2fd5036c3ff956d66e86bcd7c1b5 278 Pfam PF08241 Methyltransferase domain 65 158 6.9E-17 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 P40_19245 e3de2fd5036c3ff956d66e86bcd7c1b5 278 SUPERFAMILY SSF53335 26 275 8.76E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_09860 058cada63c8cf46ee5ad5ccd40e14933 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 8.6E-43 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_09860 058cada63c8cf46ee5ad5ccd40e14933 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 120 1.2E-30 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_09860 058cada63c8cf46ee5ad5ccd40e14933 383 SUPERFAMILY SSF56645 6 246 1.03E-76 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_09860 058cada63c8cf46ee5ad5ccd40e14933 383 SUPERFAMILY SSF47203 232 381 8.86E-49 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_09860 058cada63c8cf46ee5ad5ccd40e14933 383 Gene3D G3DSA:1.20.140.10 239 383 7.9E-45 T 13-10-2018 P40_09860 058cada63c8cf46ee5ad5ccd40e14933 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 220 6.0E-26 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_09860 058cada63c8cf46ee5ad5ccd40e14933 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_09860 058cada63c8cf46ee5ad5ccd40e14933 383 Gene3D G3DSA:1.10.540.10 1 122 4.9E-34 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_09860 058cada63c8cf46ee5ad5ccd40e14933 383 Gene3D G3DSA:2.40.110.10 123 238 2.0E-39 T 13-10-2018 P40_09810 7d7fc5142204da5d9958f131d7cf6f1c 303 Pfam PF10118 Predicted metal-dependent hydrolase 24 268 5.5E-72 T 13-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 P40_09810 7d7fc5142204da5d9958f131d7cf6f1c 303 PIRSF PIRSF007580 7 287 2.7E-64 T 13-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 P40_03660 a2c67b8d0afc289db1524735eff9df4c 392 PIRSF PIRSF001549 6 328 2.2E-46 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 P40_03660 a2c67b8d0afc289db1524735eff9df4c 392 SUPERFAMILY SSF55681 7 324 5.45E-59 T 13-10-2018 P40_03660 a2c67b8d0afc289db1524735eff9df4c 392 Gene3D G3DSA:3.30.930.10 4 328 5.2E-72 T 13-10-2018 P40_03660 a2c67b8d0afc289db1524735eff9df4c 392 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 372 31.708 T 13-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 P40_03660 a2c67b8d0afc289db1524735eff9df4c 392 Pfam PF13393 Histidyl-tRNA synthetase 12 321 1.9E-111 T 13-10-2018 P40_03660 a2c67b8d0afc289db1524735eff9df4c 392 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 15 325 5.5E-84 T 13-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 P40_11915 302f6286e77eaa59bad49bef96d9c06f 194 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 13 184 5.6E-58 T 13-10-2018 IPR010195 Uncharacterised peroxidase-related P40_11915 302f6286e77eaa59bad49bef96d9c06f 194 Pfam PF02627 Carboxymuconolactone decarboxylase family 46 102 9.6E-12 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 P40_11915 302f6286e77eaa59bad49bef96d9c06f 194 SUPERFAMILY SSF69118 13 192 6.02E-53 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 P40_11915 302f6286e77eaa59bad49bef96d9c06f 194 Gene3D G3DSA:1.20.5.810 13 64 2.8E-25 T 13-10-2018 P40_11915 302f6286e77eaa59bad49bef96d9c06f 194 Gene3D G3DSA:1.20.1290.10 67 190 1.2E-34 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 P40_11915 302f6286e77eaa59bad49bef96d9c06f 194 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 67 112 6.6E-12 T 13-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 P40_18895 329ee891cc6da5b6bb9c0f5e261c8cf6 304 SUPERFAMILY SSF51430 33 302 5.24E-54 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_18895 329ee891cc6da5b6bb9c0f5e261c8cf6 304 Pfam PF00248 Aldo/keto reductase family 54 299 2.8E-32 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain P40_18895 329ee891cc6da5b6bb9c0f5e261c8cf6 304 Gene3D G3DSA:3.20.20.100 32 303 1.4E-46 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_04265 f239ccf7f69a0db911e390c17163cd5d 316 SUPERFAMILY SSF46785 5 84 1.43E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_04265 f239ccf7f69a0db911e390c17163cd5d 316 SUPERFAMILY SSF53850 90 307 4.34E-37 T 13-10-2018 P40_04265 f239ccf7f69a0db911e390c17163cd5d 316 Gene3D G3DSA:1.10.10.10 1 86 4.8E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_04265 f239ccf7f69a0db911e390c17163cd5d 316 Pfam PF03466 LysR substrate binding domain 93 308 3.1E-19 T 13-10-2018 IPR005119 LysR, substrate-binding P40_04265 f239ccf7f69a0db911e390c17163cd5d 316 Gene3D G3DSA:3.40.190.10 170 279 3.0E-58 T 13-10-2018 P40_04265 f239ccf7f69a0db911e390c17163cd5d 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_04265 f239ccf7f69a0db911e390c17163cd5d 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_04265 f239ccf7f69a0db911e390c17163cd5d 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_04265 f239ccf7f69a0db911e390c17163cd5d 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.2E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_04265 f239ccf7f69a0db911e390c17163cd5d 316 Gene3D G3DSA:3.40.190.10 92 303 3.0E-58 T 13-10-2018 P40_12600 8a68be19a9d5415f38b0835a0ceb4801 377 Gene3D G3DSA:1.10.540.10 3 118 1.3E-19 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_12600 8a68be19a9d5415f38b0835a0ceb4801 377 SUPERFAMILY SSF47203 225 365 7.09E-30 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_12600 8a68be19a9d5415f38b0835a0ceb4801 377 SUPERFAMILY SSF56645 4 218 7.07E-38 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_12600 8a68be19a9d5415f38b0835a0ceb4801 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 351 3.3E-20 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_12600 8a68be19a9d5415f38b0835a0ceb4801 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 2.5E-11 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_12600 8a68be19a9d5415f38b0835a0ceb4801 377 Gene3D G3DSA:2.40.110.10 129 223 7.1E-18 T 13-10-2018 P40_12600 8a68be19a9d5415f38b0835a0ceb4801 377 Gene3D G3DSA:1.20.140.10 224 374 1.9E-27 T 13-10-2018 P40_12600 8a68be19a9d5415f38b0835a0ceb4801 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 208 8.0E-9 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_00380 1bf18691507db39d4e4d0ad74460dd81 177 SUPERFAMILY SSF53271 32 159 1.7E-32 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like P40_00380 1bf18691507db39d4e4d0ad74460dd81 177 Pfam PF00156 Phosphoribosyl transferase domain 36 143 1.0E-16 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 P40_00380 1bf18691507db39d4e4d0ad74460dd81 177 Gene3D G3DSA:3.40.50.2020 3 174 2.6E-38 T 13-10-2018 P40_19275 2edfa9f4bb56e065b802d0d8c0776a52 410 SUPERFAMILY SSF56645 4 258 1.83E-51 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_19275 2edfa9f4bb56e065b802d0d8c0776a52 410 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 144 243 2.0E-21 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_19275 2edfa9f4bb56e065b802d0d8c0776a52 410 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 259 406 7.5E-43 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_19275 2edfa9f4bb56e065b802d0d8c0776a52 410 Gene3D G3DSA:2.40.110.10 142 261 1.1E-32 T 13-10-2018 P40_19275 2edfa9f4bb56e065b802d0d8c0776a52 410 SUPERFAMILY SSF47203 256 409 1.48E-42 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_19275 2edfa9f4bb56e065b802d0d8c0776a52 410 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 145 157 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_19275 2edfa9f4bb56e065b802d0d8c0776a52 410 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 138 3.4E-9 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_19275 2edfa9f4bb56e065b802d0d8c0776a52 410 Gene3D G3DSA:1.10.540.10 1 141 1.1E-15 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_19275 2edfa9f4bb56e065b802d0d8c0776a52 410 Gene3D G3DSA:1.20.140.10 262 409 3.6E-42 T 13-10-2018 P40_19955 9e6c9afd5728a6d6183940aed0d1c5e1 332 SUPERFAMILY SSF53850 22 330 2.67E-82 T 13-10-2018 P40_19955 9e6c9afd5728a6d6183940aed0d1c5e1 332 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 148 156 - T 13-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 P40_19955 9e6c9afd5728a6d6183940aed0d1c5e1 332 Gene3D G3DSA:3.40.190.10 29 297 4.6E-132 T 13-10-2018 P40_19955 9e6c9afd5728a6d6183940aed0d1c5e1 332 Gene3D G3DSA:3.40.190.10 117 327 4.6E-132 T 13-10-2018 P40_19955 9e6c9afd5728a6d6183940aed0d1c5e1 332 Pfam PF13531 Bacterial extracellular solute-binding protein 42 282 4.0E-38 T 13-10-2018 P40_19955 9e6c9afd5728a6d6183940aed0d1c5e1 332 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 22 328 3.2E-145 T 13-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 P40_18785 eaf95863910fb0d9401bab06fd7e2c1d 466 Pfam PF00209 Sodium:neurotransmitter symporter family 150 461 1.3E-19 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 P40_18785 eaf95863910fb0d9401bab06fd7e2c1d 466 Pfam PF00209 Sodium:neurotransmitter symporter family 11 125 7.7E-24 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 P40_18785 eaf95863910fb0d9401bab06fd7e2c1d 466 SUPERFAMILY SSF161070 10 461 4.45E-124 T 13-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 P40_18785 eaf95863910fb0d9401bab06fd7e2c1d 466 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 1.5E-15 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 P40_18785 eaf95863910fb0d9401bab06fd7e2c1d 466 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 1.5E-15 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 P40_18785 eaf95863910fb0d9401bab06fd7e2c1d 466 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 271 291 1.5E-15 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 P40_18785 eaf95863910fb0d9401bab06fd7e2c1d 466 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 441 461 1.5E-15 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 P40_18785 eaf95863910fb0d9401bab06fd7e2c1d 466 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 33 47 - T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 P40_18555 37dddbfbbc22f4af7fb2abf92238e8f1 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 5.0E-48 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 P40_18555 37dddbfbbc22f4af7fb2abf92238e8f1 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 66.389 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 P40_18555 37dddbfbbc22f4af7fb2abf92238e8f1 126 SUPERFAMILY SSF50692 1 115 4.72E-46 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily P40_18555 37dddbfbbc22f4af7fb2abf92238e8f1 126 Gene3D G3DSA:2.40.40.20 1 126 8.3E-51 T 13-10-2018 P40_18555 37dddbfbbc22f4af7fb2abf92238e8f1 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 8.3E-46 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 P40_18555 37dddbfbbc22f4af7fb2abf92238e8f1 126 PIRSF PIRSF006246 1 125 2.3E-48 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 P40_18555 37dddbfbbc22f4af7fb2abf92238e8f1 126 Pfam PF02261 Aspartate decarboxylase 1 114 5.0E-47 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 P40_21085 fce96f525247572ebca5391699ee8a60 921 SUPERFAMILY SSF56672 510 921 5.89E-156 T 13-10-2018 P40_21085 fce96f525247572ebca5391699ee8a60 921 Pfam PF00476 DNA polymerase family A 539 919 4.0E-155 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_21085 fce96f525247572ebca5391699ee8a60 921 SMART SM00475 5 266 4.2E-137 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 P40_21085 fce96f525247572ebca5391699ee8a60 921 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 169 270 3.4E-31 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 P40_21085 fce96f525247572ebca5391699ee8a60 921 SUPERFAMILY SSF88723 4 168 3.68E-56 T 13-10-2018 IPR029060 PIN-like domain superfamily P40_21085 fce96f525247572ebca5391699ee8a60 921 SMART SM00279 171 206 4.3E-13 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 P40_21085 fce96f525247572ebca5391699ee8a60 921 Pfam PF01612 3'-5' exonuclease 317 505 7.7E-44 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 P40_21085 fce96f525247572ebca5391699ee8a60 921 Gene3D G3DSA:3.30.420.10 314 530 5.0E-74 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_21085 fce96f525247572ebca5391699ee8a60 921 SUPERFAMILY SSF53098 314 506 1.32E-58 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_21085 fce96f525247572ebca5391699ee8a60 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 716 5.3E-69 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_21085 fce96f525247572ebca5391699ee8a60 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 838 854 5.3E-69 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_21085 fce96f525247572ebca5391699ee8a60 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 784 795 5.3E-69 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_21085 fce96f525247572ebca5391699ee8a60 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 868 881 5.3E-69 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_21085 fce96f525247572ebca5391699ee8a60 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 5.3E-69 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_21085 fce96f525247572ebca5391699ee8a60 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 643 665 5.3E-69 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_21085 fce96f525247572ebca5391699ee8a60 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 723 736 5.3E-69 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_21085 fce96f525247572ebca5391699ee8a60 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 747 772 5.3E-69 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_21085 fce96f525247572ebca5391699ee8a60 921 SMART SM00482 674 885 8.2E-112 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_21085 fce96f525247572ebca5391699ee8a60 921 Gene3D G3DSA:1.10.150.20 702 845 1.7E-111 T 13-10-2018 P40_21085 fce96f525247572ebca5391699ee8a60 921 Gene3D G3DSA:1.10.150.20 172 251 1.1E-96 T 13-10-2018 P40_21085 fce96f525247572ebca5391699ee8a60 921 Gene3D G3DSA:1.20.1060.10 531 646 5.1E-41 T 13-10-2018 P40_21085 fce96f525247572ebca5391699ee8a60 921 ProSitePatterns PS00447 DNA polymerase family A signature. 747 766 - T 13-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_21085 fce96f525247572ebca5391699ee8a60 921 SMART SM00474 317 505 9.6E-47 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 P40_21085 fce96f525247572ebca5391699ee8a60 921 Gene3D G3DSA:3.30.70.370 652 917 1.7E-111 T 13-10-2018 P40_21085 fce96f525247572ebca5391699ee8a60 921 SUPERFAMILY SSF47807 169 288 9.87E-32 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily P40_21085 fce96f525247572ebca5391699ee8a60 921 TIGRFAM TIGR00593 pola: DNA polymerase I 8 921 5.1E-286 T 13-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P40_21085 fce96f525247572ebca5391699ee8a60 921 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 168 2.6E-53 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 P40_21085 fce96f525247572ebca5391699ee8a60 921 Gene3D G3DSA:3.40.50.1010 8 282 1.1E-96 T 13-10-2018 P40_09935 4b80f41c5ba0fb529c772ec889812b60 549 PIRSF PIRSF000137 1 547 2.1E-152 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_09935 4b80f41c5ba0fb529c772ec889812b60 549 SUPERFAMILY SSF51905 2 541 1.58E-90 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_09935 4b80f41c5ba0fb529c772ec889812b60 549 Gene3D G3DSA:3.50.50.60 5 536 5.2E-183 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_09935 4b80f41c5ba0fb529c772ec889812b60 549 Pfam PF05199 GMC oxidoreductase 396 531 1.3E-40 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 P40_09935 4b80f41c5ba0fb529c772ec889812b60 549 Gene3D G3DSA:1.10.1220.110 99 156 5.2E-183 T 13-10-2018 P40_09935 4b80f41c5ba0fb529c772ec889812b60 549 Gene3D G3DSA:4.10.450.10 39 202 5.2E-183 T 13-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 P40_09935 4b80f41c5ba0fb529c772ec889812b60 549 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 260 274 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_09935 4b80f41c5ba0fb529c772ec889812b60 549 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 84 107 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_09935 4b80f41c5ba0fb529c772ec889812b60 549 SUPERFAMILY SSF54373 296 482 6.97E-57 T 13-10-2018 P40_09935 4b80f41c5ba0fb529c772ec889812b60 549 Pfam PF00732 GMC oxidoreductase 6 301 2.9E-84 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_09935 4b80f41c5ba0fb529c772ec889812b60 549 Gene3D G3DSA:3.30.410.40 157 479 5.2E-183 T 13-10-2018 P40_21245 a46b59edf22fe4833ef6d53dc4d9dec4 164 SMART SM00226 5 140 1.6E-41 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I P40_21245 a46b59edf22fe4833ef6d53dc4d9dec4 164 Gene3D G3DSA:3.40.50.2300 5 141 2.5E-40 T 13-10-2018 P40_21245 a46b59edf22fe4833ef6d53dc4d9dec4 164 SUPERFAMILY SSF52788 5 139 1.27E-39 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily P40_21245 a46b59edf22fe4833ef6d53dc4d9dec4 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 42 58 9.4E-5 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 P40_21245 a46b59edf22fe4833ef6d53dc4d9dec4 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 7 24 9.4E-5 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 P40_21245 a46b59edf22fe4833ef6d53dc4d9dec4 164 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 137 1.2E-23 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I P40_04905 23656c479b37886f5a8857926b637a6a 444 SMART SM00388 223 288 2.8E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_04905 23656c479b37886f5a8857926b637a6a 444 SMART SM00387 332 441 1.6E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_04905 23656c479b37886f5a8857926b637a6a 444 SUPERFAMILY SSF55874 278 438 2.36E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_04905 23656c479b37886f5a8857926b637a6a 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.0E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_04905 23656c479b37886f5a8857926b637a6a 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 1.0E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_04905 23656c479b37886f5a8857926b637a6a 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 426 2.4E-14 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_04905 23656c479b37886f5a8857926b637a6a 444 Gene3D G3DSA:1.10.287.130 173 287 1.2E-16 T 13-10-2018 P40_04905 23656c479b37886f5a8857926b637a6a 444 SUPERFAMILY SSF47384 206 287 1.8E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_04905 23656c479b37886f5a8857926b637a6a 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 286 6.2E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_04905 23656c479b37886f5a8857926b637a6a 444 Gene3D G3DSA:3.30.565.10 288 439 1.6E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_17680 a6d5b2e4abf6277bbad78b59b03edaa3 201 Gene3D G3DSA:2.40.10.10 68 186 2.0E-18 T 13-10-2018 P40_17680 a6d5b2e4abf6277bbad78b59b03edaa3 201 SUPERFAMILY SSF50494 2 175 2.7E-13 T 13-10-2018 IPR009003 Peptidase S1, PA clan P40_17680 a6d5b2e4abf6277bbad78b59b03edaa3 201 Gene3D G3DSA:2.40.10.10 2 197 2.0E-18 T 13-10-2018 P40_13485 26055e939b7860f8a24bf7ad1a5af15b 342 Gene3D G3DSA:3.40.190.10 120 266 1.4E-58 T 13-10-2018 P40_13485 26055e939b7860f8a24bf7ad1a5af15b 342 SUPERFAMILY SSF53850 29 330 1.09E-46 T 13-10-2018 P40_13485 26055e939b7860f8a24bf7ad1a5af15b 342 Pfam PF16868 NMT1-like family 33 329 9.6E-47 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_13485 26055e939b7860f8a24bf7ad1a5af15b 342 Gene3D G3DSA:3.40.190.10 33 329 1.4E-58 T 13-10-2018 P40_13485 26055e939b7860f8a24bf7ad1a5af15b 342 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 12 329 6.4E-42 T 13-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P40_03090 3f08a3db18ec47bb8a40e480508c2e76 625 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 136 590 99.81 T 13-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 P40_03090 3f08a3db18ec47bb8a40e480508c2e76 625 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 136 588 4.0E-217 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 P40_03090 3f08a3db18ec47bb8a40e480508c2e76 625 Gene3D G3DSA:3.20.20.540 209 521 9.2E-156 T 13-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 P40_03090 3f08a3db18ec47bb8a40e480508c2e76 625 Pfam PF13667 ThiC-associated domain 20 97 1.7E-32 T 13-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 P40_03090 3f08a3db18ec47bb8a40e480508c2e76 625 Pfam PF01964 Radical SAM ThiC family 138 586 9.0E-201 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 P40_13040 178624a672d09889e65e568a297f606f 239 PIRSF PIRSF009120 1 239 1.6E-100 T 13-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 P40_13040 178624a672d09889e65e568a297f606f 239 Gene3D G3DSA:3.60.20.10 2 222 9.0E-28 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P40_13040 178624a672d09889e65e568a297f606f 239 SUPERFAMILY SSF56235 2 228 1.12E-36 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P40_13040 178624a672d09889e65e568a297f606f 239 Pfam PF00227 Proteasome subunit 4 182 7.6E-11 T 13-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 P40_10395 1001215675595964a85b2ef949c56dc1 547 SUPERFAMILY SSF52096 301 536 9.33E-12 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_10395 1001215675595964a85b2ef949c56dc1 547 TIGRFAM TIGR03222 benzo_boxC: benzoyl-CoA-dihydrodiol lyase 2 547 7.3E-277 T 13-10-2018 IPR017633 Benzoyl-CoA-dihydrodiol lyase KEGG: 00362+4.1.2.44|MetaCyc: PWY-1361 P40_10395 1001215675595964a85b2ef949c56dc1 547 Pfam PF00378 Enoyl-CoA hydratase/isomerase 42 231 6.6E-20 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_10395 1001215675595964a85b2ef949c56dc1 547 Gene3D G3DSA:3.90.226.10 253 482 5.4E-256 T 13-10-2018 P40_10395 1001215675595964a85b2ef949c56dc1 547 SUPERFAMILY SSF52096 10 231 1.36E-32 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_10395 1001215675595964a85b2ef949c56dc1 547 Gene3D G3DSA:3.90.226.10 2 547 5.4E-256 T 13-10-2018 P40_18145 7a03e659172b6657ede9d8add25e98ab 118 Pfam PF00416 Ribosomal protein S13/S18 3 62 2.6E-14 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18145 7a03e659172b6657ede9d8add25e98ab 118 Pfam PF00416 Ribosomal protein S13/S18 64 108 2.1E-17 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18145 7a03e659172b6657ede9d8add25e98ab 118 SUPERFAMILY SSF46946 2 114 6.02E-46 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 P40_18145 7a03e659172b6657ede9d8add25e98ab 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.7E-53 T 13-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18145 7a03e659172b6657ede9d8add25e98ab 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 13-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18145 7a03e659172b6657ede9d8add25e98ab 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 13-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18145 7a03e659172b6657ede9d8add25e98ab 118 PIRSF PIRSF002134 1 118 1.3E-41 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18145 7a03e659172b6657ede9d8add25e98ab 118 Gene3D G3DSA:1.10.8.50 1 71 1.7E-28 T 13-10-2018 P40_18145 7a03e659172b6657ede9d8add25e98ab 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.012 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_10720 24c3a62027dca4acbd9440ba17892134 374 Gene3D G3DSA:3.40.50.150 8 178 3.2E-44 T 13-10-2018 P40_10720 24c3a62027dca4acbd9440ba17892134 374 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 300 306 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 P40_10720 24c3a62027dca4acbd9440ba17892134 374 SUPERFAMILY SSF53335 191 348 2.98E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_10720 24c3a62027dca4acbd9440ba17892134 374 Pfam PF05175 Methyltransferase small domain 199 368 5.7E-52 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 P40_10720 24c3a62027dca4acbd9440ba17892134 374 Gene3D G3DSA:3.40.50.150 186 372 1.5E-51 T 13-10-2018 P40_10720 24c3a62027dca4acbd9440ba17892134 374 PIRSF PIRSF037565 1 372 2.0E-102 T 13-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 P40_12055 0214ac6b5546d831d052cda2655fdf80 605 SUPERFAMILY SSF55486 192 457 2.49E-10 T 13-10-2018 P40_12055 0214ac6b5546d831d052cda2655fdf80 605 Pfam PF13180 PDZ domain 508 576 2.1E-11 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_12055 0214ac6b5546d831d052cda2655fdf80 605 SUPERFAMILY SSF50156 499 581 4.47E-11 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 P40_12055 0214ac6b5546d831d052cda2655fdf80 605 Gene3D G3DSA:2.60.40.3650 9 184 4.0E-65 T 13-10-2018 P40_12055 0214ac6b5546d831d052cda2655fdf80 605 Gene3D G3DSA:2.30.42.10 498 602 5.8E-20 T 13-10-2018 P40_12055 0214ac6b5546d831d052cda2655fdf80 605 Gene3D G3DSA:1.10.390.60 186 461 4.6E-104 T 13-10-2018 P40_12055 0214ac6b5546d831d052cda2655fdf80 605 PIRSF PIRSF016493 5 602 5.8E-219 T 13-10-2018 IPR024191 Peptidase M61 P40_12055 0214ac6b5546d831d052cda2655fdf80 605 SMART SM00228 498 567 1.6E-4 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_12055 0214ac6b5546d831d052cda2655fdf80 605 Pfam PF05299 M61 glycyl aminopeptidase 281 396 2.7E-45 T 13-10-2018 IPR007963 Peptidase M61, catalytic domain P40_09140 a581a384ea6201c4949e85db4e9cda82 393 Gene3D G3DSA:3.90.1150.10 13 378 4.8E-118 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_09140 a581a384ea6201c4949e85db4e9cda82 393 Pfam PF00155 Aminotransferase class I and II 32 371 3.3E-46 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_09140 a581a384ea6201c4949e85db4e9cda82 393 Gene3D G3DSA:3.40.640.10 42 287 4.8E-118 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_09140 a581a384ea6201c4949e85db4e9cda82 393 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 390 2.4E-196 T 13-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 P40_09140 a581a384ea6201c4949e85db4e9cda82 393 SUPERFAMILY SSF53383 2 392 8.76E-89 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_05040 95fdb74f6d8a2faee870a3decbd62592 221 Gene3D G3DSA:1.20.1050.10 84 211 6.4E-27 T 13-10-2018 P40_05040 95fdb74f6d8a2faee870a3decbd62592 221 Pfam PF00043 Glutathione S-transferase, C-terminal domain 147 205 4.3E-6 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal P40_05040 95fdb74f6d8a2faee870a3decbd62592 221 Gene3D G3DSA:3.40.30.10 1 83 1.5E-35 T 13-10-2018 P40_05040 95fdb74f6d8a2faee870a3decbd62592 221 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 74 2.5E-16 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_05040 95fdb74f6d8a2faee870a3decbd62592 221 SUPERFAMILY SSF52833 1 85 4.81E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_05040 95fdb74f6d8a2faee870a3decbd62592 221 SUPERFAMILY SSF47616 87 210 1.36E-18 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_10675 e60cd9732b3d125de95a460125064e07 207 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 21 2.8E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_10675 e60cd9732b3d125de95a460125064e07 207 Pfam PF11612 Type II secretion system (T2SS), protein J 56 199 1.9E-40 T 13-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 P40_10675 e60cd9732b3d125de95a460125064e07 207 Gene3D G3DSA:3.10.610.10 36 140 2.4E-26 T 13-10-2018 P40_10675 e60cd9732b3d125de95a460125064e07 207 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 21 1.3E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_10675 e60cd9732b3d125de95a460125064e07 207 SUPERFAMILY SSF54523 37 201 1.1E-37 T 13-10-2018 P40_10675 e60cd9732b3d125de95a460125064e07 207 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 4 201 5.3E-34 T 13-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 P40_20955 b197d1f21008e065e538ab5cda677e2d 331 Pfam PF01548 Transposase 5 150 3.0E-26 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_20955 b197d1f21008e065e538ab5cda677e2d 331 Pfam PF02371 Transposase IS116/IS110/IS902 family 197 283 2.9E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_09460 b197d1f21008e065e538ab5cda677e2d 331 Pfam PF01548 Transposase 5 150 3.0E-26 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_09460 b197d1f21008e065e538ab5cda677e2d 331 Pfam PF02371 Transposase IS116/IS110/IS902 family 197 283 2.9E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_20820 b197d1f21008e065e538ab5cda677e2d 331 Pfam PF01548 Transposase 5 150 3.0E-26 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_20820 b197d1f21008e065e538ab5cda677e2d 331 Pfam PF02371 Transposase IS116/IS110/IS902 family 197 283 2.9E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_01225 b197d1f21008e065e538ab5cda677e2d 331 Pfam PF01548 Transposase 5 150 3.0E-26 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_01225 b197d1f21008e065e538ab5cda677e2d 331 Pfam PF02371 Transposase IS116/IS110/IS902 family 197 283 2.9E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_14375 b197d1f21008e065e538ab5cda677e2d 331 Pfam PF01548 Transposase 5 150 3.0E-26 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_14375 b197d1f21008e065e538ab5cda677e2d 331 Pfam PF02371 Transposase IS116/IS110/IS902 family 197 283 2.9E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_05990 2271cad87d2a28185a4ed196edcff1e8 183 Gene3D G3DSA:2.40.30.100 8 95 5.4E-8 T 13-10-2018 IPR037079 AF2212/PG0164-like superfamily P40_05990 2271cad87d2a28185a4ed196edcff1e8 183 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 100 159 1.7E-23 T 13-10-2018 P40_05990 2271cad87d2a28185a4ed196edcff1e8 183 Pfam PF08922 Domain of unknown function (DUF1905) 10 92 4.7E-17 T 13-10-2018 IPR015018 Protein of unknown function DUF1905 P40_05990 2271cad87d2a28185a4ed196edcff1e8 183 SUPERFAMILY SSF141694 10 94 1.02E-16 T 13-10-2018 P40_00605 ad534a7e5d05cb3808f3b77b122c7506 382 SUPERFAMILY SSF47203 274 378 6.28E-5 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_00605 ad534a7e5d05cb3808f3b77b122c7506 382 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_00605 ad534a7e5d05cb3808f3b77b122c7506 382 Gene3D G3DSA:1.10.540.10 5 126 1.4E-27 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_00605 ad534a7e5d05cb3808f3b77b122c7506 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 2.6E-19 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_00605 ad534a7e5d05cb3808f3b77b122c7506 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 125 4.5E-23 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_00605 ad534a7e5d05cb3808f3b77b122c7506 382 SUPERFAMILY SSF56645 12 246 1.13E-64 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_00605 ad534a7e5d05cb3808f3b77b122c7506 382 Gene3D G3DSA:1.20.140.10 241 382 6.1E-10 T 13-10-2018 P40_00605 ad534a7e5d05cb3808f3b77b122c7506 382 Gene3D G3DSA:2.40.110.10 128 240 3.3E-33 T 13-10-2018 P40_00605 ad534a7e5d05cb3808f3b77b122c7506 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 276 379 2.9E-5 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_03315 8414c21a41b2e345851c756600fd7021 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_03315 8414c21a41b2e345851c756600fd7021 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_03315 8414c21a41b2e345851c756600fd7021 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_03315 8414c21a41b2e345851c756600fd7021 304 Gene3D G3DSA:1.10.10.10 3 89 8.6E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_03315 8414c21a41b2e345851c756600fd7021 304 Pfam PF03466 LysR substrate binding domain 88 293 5.3E-45 T 13-10-2018 IPR005119 LysR, substrate-binding P40_03315 8414c21a41b2e345851c756600fd7021 304 Gene3D G3DSA:3.40.190.290 90 292 9.1E-71 T 13-10-2018 P40_03315 8414c21a41b2e345851c756600fd7021 304 SUPERFAMILY SSF46785 4 85 5.75E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_03315 8414c21a41b2e345851c756600fd7021 304 SUPERFAMILY SSF53850 86 297 8.53E-51 T 13-10-2018 P40_03315 8414c21a41b2e345851c756600fd7021 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.3E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_07995 44b39359a44eaed8bbe014a9e4467046 142 SUPERFAMILY SSF82784 1 140 7.72E-46 T 13-10-2018 IPR036102 OsmC/Ohr superfamily P40_07995 44b39359a44eaed8bbe014a9e4467046 142 Gene3D G3DSA:3.30.300.20 48 141 4.6E-35 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta P40_07995 44b39359a44eaed8bbe014a9e4467046 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 140 2.6E-56 T 13-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 P40_07995 44b39359a44eaed8bbe014a9e4467046 142 Gene3D G3DSA:2.20.25.10 1 47 1.3E-23 T 13-10-2018 P40_07995 44b39359a44eaed8bbe014a9e4467046 142 Pfam PF02566 OsmC-like protein 43 138 5.0E-18 T 13-10-2018 IPR003718 OsmC/Ohr family P40_17515 1502817dfb9e4b5d2b210d9a15afd0cd 321 Pfam PF06834 TraU protein 27 307 3.1E-66 T 13-10-2018 IPR009649 TraU P40_17515 1502817dfb9e4b5d2b210d9a15afd0cd 321 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 20 317 2.8E-118 T 13-10-2018 IPR026331 Integrating conjugative element protein PFL_4710 P40_17215 5a84f0b8591ed5d22dd5d7d31626265a 416 Gene3D G3DSA:3.40.640.10 48 311 1.2E-153 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_17215 5a84f0b8591ed5d22dd5d7d31626265a 416 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 229 266 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_17215 5a84f0b8591ed5d22dd5d7d31626265a 416 PIRSF PIRSF000521 14 118 3.2E-8 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_17215 5a84f0b8591ed5d22dd5d7d31626265a 416 PIRSF PIRSF000521 109 415 7.8E-48 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_17215 5a84f0b8591ed5d22dd5d7d31626265a 416 Gene3D G3DSA:3.90.1150.10 11 409 1.2E-153 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_17215 5a84f0b8591ed5d22dd5d7d31626265a 416 SUPERFAMILY SSF53383 13 413 2.96E-132 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_17215 5a84f0b8591ed5d22dd5d7d31626265a 416 Pfam PF00202 Aminotransferase class-III 14 412 4.5E-124 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P40_09900 b689113ae306343af368dfc59e2cc317 549 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 30 233 1.5E-19 T 13-10-2018 P40_09900 b689113ae306343af368dfc59e2cc317 549 SUPERFAMILY SSF51905 303 475 9.06E-16 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_09900 b689113ae306343af368dfc59e2cc317 549 Gene3D G3DSA:3.50.50.60 13 190 1.5E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_09900 b689113ae306343af368dfc59e2cc317 549 Gene3D G3DSA:3.50.50.60 316 501 2.9E-25 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_09900 b689113ae306343af368dfc59e2cc317 549 SUPERFAMILY SSF51905 28 253 4.53E-50 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_09900 b689113ae306343af368dfc59e2cc317 549 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 150 158 5.4E-6 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_09900 b689113ae306343af368dfc59e2cc317 549 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 28 50 5.4E-6 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_09900 b689113ae306343af368dfc59e2cc317 549 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 189 213 5.4E-6 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P40_17280 49737156e81d8a8a0504fb75fa0bb015 270 Gene3D G3DSA:3.40.50.300 1 263 4.6E-42 T 13-10-2018 P40_17280 49737156e81d8a8a0504fb75fa0bb015 270 Pfam PF13614 AAA domain 2 151 6.2E-22 T 13-10-2018 IPR025669 AAA domain P40_17280 49737156e81d8a8a0504fb75fa0bb015 270 SUPERFAMILY SSF52540 1 262 5.96E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07185 05a825225036a3044f584157b0055797 247 TIGRFAM TIGR00444 mazG: MazG family protein 1 244 5.7E-94 T 13-10-2018 IPR011551 NTP pyrophosphohydrolase MazG P40_07185 05a825225036a3044f584157b0055797 247 SUPERFAMILY SSF101386 128 223 9.16E-27 T 13-10-2018 P40_07185 05a825225036a3044f584157b0055797 247 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 17 90 2.2E-26 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core P40_07185 05a825225036a3044f584157b0055797 247 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 161 219 8.7E-8 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core P40_07185 05a825225036a3044f584157b0055797 247 SUPERFAMILY SSF101386 3 91 2.24E-22 T 13-10-2018 P40_07185 05a825225036a3044f584157b0055797 247 Gene3D G3DSA:1.10.287.1080 121 247 2.4E-44 T 13-10-2018 P40_07185 05a825225036a3044f584157b0055797 247 Gene3D G3DSA:1.10.287.1080 1 114 7.1E-43 T 13-10-2018 P40_04830 89004ac2d4816edff1d16c6cff1c7a81 346 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 P40_04830 89004ac2d4816edff1d16c6cff1c7a81 346 Pfam PF01207 Dihydrouridine synthase (Dus) 13 319 6.2E-106 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 P40_04830 89004ac2d4816edff1d16c6cff1c7a81 346 PIRSF PIRSF006621 1 327 1.6E-103 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 P40_04830 89004ac2d4816edff1d16c6cff1c7a81 346 Gene3D G3DSA:3.20.20.70 7 248 7.9E-78 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_04830 89004ac2d4816edff1d16c6cff1c7a81 346 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 6.3E-123 T 13-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 P40_04830 89004ac2d4816edff1d16c6cff1c7a81 346 SUPERFAMILY SSF51395 10 318 5.68E-90 T 13-10-2018 P40_04830 89004ac2d4816edff1d16c6cff1c7a81 346 Gene3D G3DSA:1.10.1200.80 251 328 6.6E-11 T 13-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 P40_04830 89004ac2d4816edff1d16c6cff1c7a81 346 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.019 T 13-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 P40_00305 79dca42424a0ff9d5e41a3785c9b3b4d 339 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 13 290 8.3E-42 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 P40_00305 79dca42424a0ff9d5e41a3785c9b3b4d 339 PIRSF PIRSF026649 2 300 1.9E-62 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 P40_13460 da9619ec7d9e4b09aba1e21bb34ddb40 369 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 352 4.8E-20 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_13460 da9619ec7d9e4b09aba1e21bb34ddb40 369 SUPERFAMILY SSF56645 1 216 4.71E-37 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_13460 da9619ec7d9e4b09aba1e21bb34ddb40 369 Gene3D G3DSA:1.10.540.10 1 118 2.0E-24 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_13460 da9619ec7d9e4b09aba1e21bb34ddb40 369 Gene3D G3DSA:2.40.110.10 120 226 1.3E-11 T 13-10-2018 P40_13460 da9619ec7d9e4b09aba1e21bb34ddb40 369 Gene3D G3DSA:1.20.140.10 230 367 3.2E-25 T 13-10-2018 P40_13460 da9619ec7d9e4b09aba1e21bb34ddb40 369 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.4E-15 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_13460 da9619ec7d9e4b09aba1e21bb34ddb40 369 SUPERFAMILY SSF47203 226 364 8.05E-26 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_20505 8795f11db1e09e8830be88581c63a7b6 302 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 33 263 2.5E-42 T 13-10-2018 P40_20505 8795f11db1e09e8830be88581c63a7b6 302 Gene3D G3DSA:3.40.50.720 5 296 1.7E-70 T 13-10-2018 P40_20505 8795f11db1e09e8830be88581c63a7b6 302 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 24 163 0.0078 T 13-10-2018 P40_20505 8795f11db1e09e8830be88581c63a7b6 302 SUPERFAMILY SSF51735 22 265 3.74E-64 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_20505 8795f11db1e09e8830be88581c63a7b6 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 5.4E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20505 8795f11db1e09e8830be88581c63a7b6 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 5.4E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20505 8795f11db1e09e8830be88581c63a7b6 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 25 42 5.4E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20505 8795f11db1e09e8830be88581c63a7b6 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 212 5.4E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20505 8795f11db1e09e8830be88581c63a7b6 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 100 111 5.4E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_03645 9b142645f437a7cd903c54968f311a97 394 Pfam PF01145 SPFH domain / Band 7 family 81 251 1.8E-27 T 13-10-2018 IPR001107 Band 7 domain P40_03645 9b142645f437a7cd903c54968f311a97 394 SUPERFAMILY SSF117892 109 242 6.28E-21 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily P40_03645 9b142645f437a7cd903c54968f311a97 394 SMART SM00244 77 237 2.3E-25 T 13-10-2018 IPR001107 Band 7 domain P40_03645 9b142645f437a7cd903c54968f311a97 394 PRINTS PR00721 Stomatin signature 84 106 4.6E-5 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_03645 9b142645f437a7cd903c54968f311a97 394 PRINTS PR00721 Stomatin signature 166 183 4.6E-5 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_03645 9b142645f437a7cd903c54968f311a97 394 PRINTS PR00721 Stomatin signature 131 152 4.6E-5 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_03645 9b142645f437a7cd903c54968f311a97 394 Gene3D G3DSA:3.30.479.30 105 239 1.6E-18 T 13-10-2018 P40_03645 9b142645f437a7cd903c54968f311a97 394 TIGRFAM TIGR01933 hflK: HflK protein 79 339 1.1E-98 T 13-10-2018 IPR010201 HflK GO:0016021 P40_03645 9b142645f437a7cd903c54968f311a97 394 Pfam PF12221 Bacterial membrane protein N terminal 1 46 9.1E-16 T 13-10-2018 IPR020980 Menbrane protein HflK, N-terminal P40_08200 ed7b4c538cbbe3e3d4f38f3af76381c1 276 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 31 254 2.5E-30 T 13-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system P40_08200 ed7b4c538cbbe3e3d4f38f3af76381c1 276 Gene3D G3DSA:3.10.450.620 17 126 2.4E-5 T 13-10-2018 P40_09855 5c64fddb4082a2cd2903156ef03d16c4 594 Pfam PF00501 AMP-binding enzyme 58 492 7.3E-64 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_09855 5c64fddb4082a2cd2903156ef03d16c4 594 Gene3D G3DSA:3.40.50.12780 38 488 1.8E-72 T 13-10-2018 P40_09855 5c64fddb4082a2cd2903156ef03d16c4 594 Gene3D G3DSA:3.30.300.310 489 591 7.9E-25 T 13-10-2018 P40_09855 5c64fddb4082a2cd2903156ef03d16c4 594 Pfam PF13193 AMP-binding enzyme C-terminal domain 501 576 4.9E-11 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_09855 5c64fddb4082a2cd2903156ef03d16c4 594 SUPERFAMILY SSF56801 49 589 9.03E-102 T 13-10-2018 P40_21540 52ffcce30bef6ad0dae61d6ff85f404d 461 SUPERFAMILY SSF52540 75 346 1.41E-91 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_21540 52ffcce30bef6ad0dae61d6ff85f404d 461 SUPERFAMILY SSF47917 343 457 7.32E-52 T 13-10-2018 P40_21540 52ffcce30bef6ad0dae61d6ff85f404d 461 SUPERFAMILY SSF50615 2 72 5.49E-25 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_21540 52ffcce30bef6ad0dae61d6ff85f404d 461 SMART SM00382 140 325 0.0059 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_21540 52ffcce30bef6ad0dae61d6ff85f404d 461 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 454 1.2E-250 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 P40_21540 52ffcce30bef6ad0dae61d6ff85f404d 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 331 340 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_21540 52ffcce30bef6ad0dae61d6ff85f404d 461 Gene3D G3DSA:2.40.10.170 1 73 8.6E-30 T 13-10-2018 P40_21540 52ffcce30bef6ad0dae61d6ff85f404d 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 340 4.2E-64 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_21540 52ffcce30bef6ad0dae61d6ff85f404d 461 Gene3D G3DSA:1.10.1140.10 343 459 4.2E-56 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_21540 52ffcce30bef6ad0dae61d6ff85f404d 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 1.6E-20 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P40_21540 52ffcce30bef6ad0dae61d6ff85f404d 461 Gene3D G3DSA:3.40.50.300 74 342 1.4E-112 T 13-10-2018 P40_21540 52ffcce30bef6ad0dae61d6ff85f404d 461 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 458 55.986 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 P40_17325 cb8bd001751893354de357f6dacd0373 131 Pfam PF01850 PIN domain 5 117 4.4E-9 T 13-10-2018 IPR002716 PIN domain P40_17325 cb8bd001751893354de357f6dacd0373 131 SUPERFAMILY SSF88723 3 124 1.12E-17 T 13-10-2018 IPR029060 PIN-like domain superfamily P40_17325 cb8bd001751893354de357f6dacd0373 131 Gene3D G3DSA:3.40.50.1010 2 127 3.0E-6 T 13-10-2018 P40_18970 def9e9654fff86db30d023769271a04b 542 SUPERFAMILY SSF53474 12 337 6.29E-57 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_18970 def9e9654fff86db30d023769271a04b 542 Gene3D G3DSA:2.60.120.260 342 540 6.2E-34 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily P40_18970 def9e9654fff86db30d023769271a04b 542 SUPERFAMILY SSF49785 331 536 1.83E-42 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily P40_18970 def9e9654fff86db30d023769271a04b 542 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 313 509 1.2E-27 T 13-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 P40_18970 def9e9654fff86db30d023769271a04b 542 Gene3D G3DSA:1.10.3020.10 141 228 3.9E-102 T 13-10-2018 P40_18970 def9e9654fff86db30d023769271a04b 542 SMART SM00939 301 530 1.5E-51 T 13-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 P40_18970 def9e9654fff86db30d023769271a04b 542 Gene3D G3DSA:3.40.50.1820 11 332 3.9E-102 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_18970 def9e9654fff86db30d023769271a04b 542 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 15 277 2.7E-67 T 13-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 P40_18970 def9e9654fff86db30d023769271a04b 542 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 11 536 1.3E-128 T 13-10-2018 IPR005674 CocE/Serine esterase GO:0016787 P40_18880 b56632b1c45993eb3fb9d45a24966ca9 478 Gene3D G3DSA:3.40.309.10 250 437 1.6E-168 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_18880 b56632b1c45993eb3fb9d45a24966ca9 478 Pfam PF00171 Aldehyde dehydrogenase family 10 467 2.6E-165 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_18880 b56632b1c45993eb3fb9d45a24966ca9 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 P40_18880 b56632b1c45993eb3fb9d45a24966ca9 478 SUPERFAMILY SSF53720 3 471 7.98E-162 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_18880 b56632b1c45993eb3fb9d45a24966ca9 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 P40_18880 b56632b1c45993eb3fb9d45a24966ca9 478 Gene3D G3DSA:3.40.605.10 6 465 1.6E-168 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_15840 2d246210b302aa2241d50cec5f632715 480 SUPERFAMILY SSF56024 287 449 2.92E-15 T 13-10-2018 P40_15840 2d246210b302aa2241d50cec5f632715 480 SUPERFAMILY SSF56024 35 258 4.08E-15 T 13-10-2018 P40_15840 2d246210b302aa2241d50cec5f632715 480 Gene3D G3DSA:3.30.870.10 292 447 1.5E-21 T 13-10-2018 P40_15840 2d246210b302aa2241d50cec5f632715 480 Pfam PF13091 PLD-like domain 300 443 1.3E-18 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 P40_07150 4be4dd666359f66c416ad4fa48b2af0d 105 SUPERFAMILY SSF46689 6 102 4.3E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_07150 4be4dd666359f66c416ad4fa48b2af0d 105 Gene3D G3DSA:1.10.10.60 10 91 8.1E-11 T 13-10-2018 P40_07150 4be4dd666359f66c416ad4fa48b2af0d 105 Pfam PF01527 Transposase 4 83 3.2E-13 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 P40_05310 e809016976aeeff902afc54899067714 250 Pfam PF01553 Acyltransferase 61 185 1.9E-29 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_05310 e809016976aeeff902afc54899067714 250 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 58 186 6.2E-35 T 13-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 P40_05310 e809016976aeeff902afc54899067714 250 SUPERFAMILY SSF69593 15 239 9.55E-47 T 13-10-2018 P40_05310 e809016976aeeff902afc54899067714 250 SMART SM00563 75 189 8.0E-37 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_00450 0e9a7f28cf708aa7133dd87c84a29cad 234 Gene3D G3DSA:3.20.20.10 3 230 3.6E-78 T 13-10-2018 IPR029066 PLP-binding barrel P40_00450 0e9a7f28cf708aa7133dd87c84a29cad 234 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 4 225 6.0E-70 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 P40_00450 0e9a7f28cf708aa7133dd87c84a29cad 234 PIRSF PIRSF004848 1 231 2.1E-69 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 P40_00450 0e9a7f28cf708aa7133dd87c84a29cad 234 Pfam PF01168 Alanine racemase, N-terminal domain 11 225 1.4E-27 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_00450 0e9a7f28cf708aa7133dd87c84a29cad 234 SUPERFAMILY SSF51419 6 223 3.4E-76 T 13-10-2018 IPR029066 PLP-binding barrel P40_00450 0e9a7f28cf708aa7133dd87c84a29cad 234 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 P40_00450 0e9a7f28cf708aa7133dd87c84a29cad 234 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 224 30.515 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 P40_09610 a1a91d13f9119c43505a6207001ba1e9 278 SMART SM00530 17 89 8.6E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_09610 a1a91d13f9119c43505a6207001ba1e9 278 SUPERFAMILY SSF47413 37 88 6.62E-5 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_09610 a1a91d13f9119c43505a6207001ba1e9 278 Pfam PF13560 Helix-turn-helix domain 13 87 1.6E-14 T 13-10-2018 P40_09610 a1a91d13f9119c43505a6207001ba1e9 278 Gene3D G3DSA:3.30.450.180 113 233 1.2E-10 T 13-10-2018 P40_15635 42e200f7e0e35bbcd40274b6b7bd0f7a 490 ProSitePatterns PS00482 Dihydroorotase signature 1. 60 68 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_15635 42e200f7e0e35bbcd40274b6b7bd0f7a 490 Pfam PF01979 Amidohydrolase family 53 429 4.8E-29 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P40_15635 42e200f7e0e35bbcd40274b6b7bd0f7a 490 Gene3D G3DSA:2.30.40.10 7 443 6.5E-148 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_15635 42e200f7e0e35bbcd40274b6b7bd0f7a 490 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 19 432 1.5E-94 T 13-10-2018 P40_15635 42e200f7e0e35bbcd40274b6b7bd0f7a 490 SUPERFAMILY SSF51556 57 375 1.82E-100 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_15635 42e200f7e0e35bbcd40274b6b7bd0f7a 490 Gene3D G3DSA:3.20.20.140 57 371 6.5E-148 T 13-10-2018 P40_15635 42e200f7e0e35bbcd40274b6b7bd0f7a 490 SUPERFAMILY SSF51338 4 438 2.49E-29 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_15635 42e200f7e0e35bbcd40274b6b7bd0f7a 490 ProSitePatterns PS00483 Dihydroorotase signature 2. 309 320 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P40_21580 e1b4582ed11c91026f6609437e98a43b 307 SUPERFAMILY SSF110849 53 188 2.56E-34 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily P40_21580 e1b4582ed11c91026f6609437e98a43b 307 Gene3D G3DSA:1.10.10.2830 131 244 3.1E-35 T 13-10-2018 P40_21580 e1b4582ed11c91026f6609437e98a43b 307 Gene3D G3DSA:3.90.1530.30 67 130 1.2E-28 T 13-10-2018 P40_21580 e1b4582ed11c91026f6609437e98a43b 307 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 51 225 2.2E-59 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 P40_21580 e1b4582ed11c91026f6609437e98a43b 307 Pfam PF02195 ParB-like nuclease domain 56 144 3.5E-28 T 13-10-2018 IPR003115 ParB/Sulfiredoxin P40_21580 e1b4582ed11c91026f6609437e98a43b 307 SMART SM00470 54 144 7.9E-36 T 13-10-2018 IPR003115 ParB/Sulfiredoxin P40_19880 32f96d15ba1b554361d12b3f5eed9495 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 5.4E-22 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 P40_19880 32f96d15ba1b554361d12b3f5eed9495 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.4E-22 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 P40_19880 32f96d15ba1b554361d12b3f5eed9495 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 196 206 5.4E-22 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 P40_19880 32f96d15ba1b554361d12b3f5eed9495 332 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 144 165 5.4E-22 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 P40_19880 32f96d15ba1b554361d12b3f5eed9495 332 Gene3D G3DSA:3.40.50.620 5 324 2.0E-98 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_19880 32f96d15ba1b554361d12b3f5eed9495 332 SUPERFAMILY SSF52374 5 329 1.88E-77 T 13-10-2018 P40_19880 32f96d15ba1b554361d12b3f5eed9495 332 Gene3D G3DSA:1.10.240.10 190 297 2.0E-98 T 13-10-2018 P40_19880 32f96d15ba1b554361d12b3f5eed9495 332 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 329 2.3E-68 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 P40_19880 32f96d15ba1b554361d12b3f5eed9495 332 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_19880 32f96d15ba1b554361d12b3f5eed9495 332 Pfam PF00579 tRNA synthetases class I (W and Y) 4 284 7.1E-52 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_16015 2bbadb1069b4f62127694b84e73a84a3 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.0E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_16015 2bbadb1069b4f62127694b84e73a84a3 297 SUPERFAMILY SSF46785 4 87 1.89E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_16015 2bbadb1069b4f62127694b84e73a84a3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.1E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_16015 2bbadb1069b4f62127694b84e73a84a3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.1E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_16015 2bbadb1069b4f62127694b84e73a84a3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.1E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_16015 2bbadb1069b4f62127694b84e73a84a3 297 Gene3D G3DSA:3.40.190.10 103 283 3.4E-62 T 13-10-2018 P40_16015 2bbadb1069b4f62127694b84e73a84a3 297 Gene3D G3DSA:3.40.190.10 163 257 3.4E-62 T 13-10-2018 P40_16015 2bbadb1069b4f62127694b84e73a84a3 297 Pfam PF03466 LysR substrate binding domain 92 287 1.3E-39 T 13-10-2018 IPR005119 LysR, substrate-binding P40_16015 2bbadb1069b4f62127694b84e73a84a3 297 SUPERFAMILY SSF53850 93 290 8.87E-38 T 13-10-2018 P40_16015 2bbadb1069b4f62127694b84e73a84a3 297 Gene3D G3DSA:1.10.10.10 6 95 2.6E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_06715 5820503970c8a392d6b27de48673f40c 630 Pfam PF12848 ABC transporter 223 298 1.4E-10 T 13-10-2018 IPR032781 ABC-transporter extension domain P40_06715 5820503970c8a392d6b27de48673f40c 630 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_06715 5820503970c8a392d6b27de48673f40c 630 Gene3D G3DSA:3.40.50.300 4 278 2.1E-69 T 13-10-2018 P40_06715 5820503970c8a392d6b27de48673f40c 630 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_06715 5820503970c8a392d6b27de48673f40c 630 Pfam PF16326 ABC transporter C-terminal domain 558 626 4.5E-20 T 13-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 P40_06715 5820503970c8a392d6b27de48673f40c 630 Pfam PF00005 ABC transporter 334 468 1.2E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_06715 5820503970c8a392d6b27de48673f40c 630 Pfam PF00005 ABC transporter 20 184 3.5E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_06715 5820503970c8a392d6b27de48673f40c 630 SUPERFAMILY SSF52540 3 238 3.94E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_06715 5820503970c8a392d6b27de48673f40c 630 Gene3D G3DSA:3.40.50.300 281 548 4.1E-65 T 13-10-2018 P40_06715 5820503970c8a392d6b27de48673f40c 630 SMART SM00382 28 229 4.4E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_06715 5820503970c8a392d6b27de48673f40c 630 SMART SM00382 343 513 1.4E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_06715 5820503970c8a392d6b27de48673f40c 630 Gene3D G3DSA:1.10.287.380 549 630 7.9E-24 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 P40_06715 5820503970c8a392d6b27de48673f40c 630 SUPERFAMILY SSF52540 311 522 1.1E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_05020 8cf9258ade70efb59636aca4cb019f7c 165 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 161 2.7E-15 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 P40_07585 560a08c3171c8126d03f304be6e799b8 566 Gene3D G3DSA:3.40.50.12780 17 460 6.3E-113 T 13-10-2018 P40_07585 560a08c3171c8126d03f304be6e799b8 566 SUPERFAMILY SSF56801 9 560 2.49E-139 T 13-10-2018 P40_07585 560a08c3171c8126d03f304be6e799b8 566 Gene3D G3DSA:3.30.300.310 461 563 5.7E-25 T 13-10-2018 P40_07585 560a08c3171c8126d03f304be6e799b8 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 549 5.8E-18 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_07585 560a08c3171c8126d03f304be6e799b8 566 Pfam PF00501 AMP-binding enzyme 30 462 3.0E-99 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_07585 560a08c3171c8126d03f304be6e799b8 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_11570 93f24be6da167ecf8ffff1769646addc 444 PIRSF PIRSF006066 5 444 8.6E-83 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_11570 93f24be6da167ecf8ffff1769646addc 444 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 436 2.8E-87 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_11570 93f24be6da167ecf8ffff1769646addc 444 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 441 5.8E-90 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 Gene3D G3DSA:3.30.230.80 232 397 2.6E-63 T 13-10-2018 P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 PIRSF PIRSF002583 1 625 1.8E-199 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 26 35 - T 13-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 PRINTS PR00775 90kDa heat shock protein signature 191 209 2.0E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 PRINTS PR00775 90kDa heat shock protein signature 27 49 2.0E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 PRINTS PR00775 90kDa heat shock protein signature 6 26 2.0E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 PRINTS PR00775 90kDa heat shock protein signature 76 93 2.0E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 PRINTS PR00775 90kDa heat shock protein signature 173 190 2.0E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 PRINTS PR00775 90kDa heat shock protein signature 121 143 2.0E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 PRINTS PR00775 90kDa heat shock protein signature 94 111 2.0E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 SUPERFAMILY SSF54211 232 484 1.06E-89 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 SUPERFAMILY SSF55874 6 212 3.11E-65 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 SMART SM00387 28 185 1.3E-11 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 SUPERFAMILY SSF110942 507 618 1.44E-29 T 13-10-2018 IPR037196 HSP90, C-terminal domain P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 Gene3D G3DSA:3.40.50.11260 398 486 1.2E-26 T 13-10-2018 P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 Pfam PF00183 Hsp90 protein 220 620 2.2E-111 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 Hamap MF_00505 Chaperone protein HtpG [htpG]. 3 619 30.712 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 Gene3D G3DSA:1.20.120.790 497 619 5.3E-37 T 13-10-2018 IPR037196 HSP90, C-terminal domain P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 Gene3D G3DSA:3.30.565.10 1 231 1.4E-77 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_12905 3a9d4c02676d0aba3a002199655ac81a 625 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 170 4.7E-12 T 13-10-2018 P40_16400 b796df3cc85f260414d0443f293f635f 910 Gene3D G3DSA:3.40.50.300 23 411 1.8E-175 T 13-10-2018 P40_16400 b796df3cc85f260414d0443f293f635f 910 SUPERFAMILY SSF52540 412 614 3.43E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_16400 b796df3cc85f260414d0443f293f635f 910 SMART SM00957 6 398 5.3E-297 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 P40_16400 b796df3cc85f260414d0443f293f635f 910 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 814 0.0 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P40_16400 b796df3cc85f260414d0443f293f635f 910 Pfam PF02810 SEC-C motif 889 907 1.6E-9 T 13-10-2018 IPR004027 SEC-C motif P40_16400 b796df3cc85f260414d0443f293f635f 910 ProSitePatterns PS01312 SecA family signature. 496 511 - T 13-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 P40_16400 b796df3cc85f260414d0443f293f635f 910 SUPERFAMILY SSF81886 616 897 1.44E-79 T 13-10-2018 IPR036266 SecA, Wing/Scaffold superfamily P40_16400 b796df3cc85f260414d0443f293f635f 910 Gene3D G3DSA:3.40.50.300 413 616 6.2E-89 T 13-10-2018 P40_16400 b796df3cc85f260414d0443f293f635f 910 Gene3D G3DSA:3.90.1440.10 229 364 1.8E-175 T 13-10-2018 P40_16400 b796df3cc85f260414d0443f293f635f 910 SUPERFAMILY SSF81767 227 364 3.01E-42 T 13-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 P40_16400 b796df3cc85f260414d0443f293f635f 910 Gene3D G3DSA:1.10.3060.10 617 829 4.1E-74 T 13-10-2018 P40_16400 b796df3cc85f260414d0443f293f635f 910 Pfam PF07517 SecA DEAD-like domain 7 398 3.5E-131 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 P40_16400 b796df3cc85f260414d0443f293f635f 910 PRINTS PR00906 SecA protein signature 170 190 2.9E-70 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P40_16400 b796df3cc85f260414d0443f293f635f 910 PRINTS PR00906 SecA protein signature 63 87 2.9E-70 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P40_16400 b796df3cc85f260414d0443f293f635f 910 PRINTS PR00906 SecA protein signature 409 422 2.9E-70 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P40_16400 b796df3cc85f260414d0443f293f635f 910 PRINTS PR00906 SecA protein signature 335 357 2.9E-70 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P40_16400 b796df3cc85f260414d0443f293f635f 910 PRINTS PR00906 SecA protein signature 117 127 2.9E-70 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P40_16400 b796df3cc85f260414d0443f293f635f 910 PRINTS PR00906 SecA protein signature 372 389 2.9E-70 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P40_16400 b796df3cc85f260414d0443f293f635f 910 PRINTS PR00906 SecA protein signature 101 115 2.9E-70 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P40_16400 b796df3cc85f260414d0443f293f635f 910 SMART SM00958 228 354 2.3E-75 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 P40_16400 b796df3cc85f260414d0443f293f635f 910 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 828 20.063 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P40_16400 b796df3cc85f260414d0443f293f635f 910 Pfam PF07516 SecA Wing and Scaffold domain 613 824 3.1E-68 T 13-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 P40_16400 b796df3cc85f260414d0443f293f635f 910 Pfam PF01043 SecA preprotein cross-linking domain 232 354 3.3E-38 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 P40_16400 b796df3cc85f260414d0443f293f635f 910 SUPERFAMILY SSF52540 5 411 6.89E-87 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07315 9c1ead6cc608ca1c6abe1df847342992 386 SUPERFAMILY SSF53850 4 253 9.99E-28 T 13-10-2018 P40_07315 9c1ead6cc608ca1c6abe1df847342992 386 Pfam PF13379 NMT1-like family 4 250 4.8E-71 T 13-10-2018 P40_07315 9c1ead6cc608ca1c6abe1df847342992 386 Gene3D G3DSA:3.40.190.10 93 214 2.8E-121 T 13-10-2018 P40_07315 9c1ead6cc608ca1c6abe1df847342992 386 Gene3D G3DSA:3.40.190.10 7 358 2.8E-121 T 13-10-2018 P40_07370 36ad198036d9fc16b537786de13de4dd 495 Gene3D G3DSA:3.30.470.20 368 484 1.9E-20 T 13-10-2018 P40_07370 36ad198036d9fc16b537786de13de4dd 495 Pfam PF08443 RimK-like ATP-grasp domain 285 462 2.1E-9 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 P40_07370 36ad198036d9fc16b537786de13de4dd 495 SUPERFAMILY SSF56059 276 480 6.7E-41 T 13-10-2018 P40_07370 36ad198036d9fc16b537786de13de4dd 495 Gene3D G3DSA:3.40.50.20 211 299 8.2E-6 T 13-10-2018 P40_07370 36ad198036d9fc16b537786de13de4dd 495 Gene3D G3DSA:3.30.1490.20 301 367 1.1E-6 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_07370 36ad198036d9fc16b537786de13de4dd 495 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 175 3.2E-49 T 13-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain P40_13135 d4d9cd73875fdaca7538bdafade1b42d 373 SUPERFAMILY SSF53383 10 373 3.93E-80 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_13135 d4d9cd73875fdaca7538bdafade1b42d 373 Pfam PF00266 Aminotransferase class-V 60 347 2.1E-48 T 13-10-2018 IPR000192 Aminotransferase class V domain P40_13135 d4d9cd73875fdaca7538bdafade1b42d 373 Gene3D G3DSA:3.40.640.10 29 286 4.8E-101 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_13135 d4d9cd73875fdaca7538bdafade1b42d 373 Gene3D G3DSA:3.90.1150.10 16 369 4.8E-101 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_02265 83c570749d147bdf46dc0cbf50989753 540 Gene3D G3DSA:3.90.226.10 1 273 3.0E-68 T 13-10-2018 P40_02265 83c570749d147bdf46dc0cbf50989753 540 SUPERFAMILY SSF52096 40 271 1.49E-52 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_02265 83c570749d147bdf46dc0cbf50989753 540 Gene3D G3DSA:3.90.226.10 275 540 1.4E-86 T 13-10-2018 P40_02265 83c570749d147bdf46dc0cbf50989753 540 SUPERFAMILY SSF52096 238 519 9.02E-76 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_02265 83c570749d147bdf46dc0cbf50989753 540 Pfam PF01039 Carboxyl transferase domain 49 526 1.9E-116 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 P40_00070 1fea249922108d315892aac78a181a1c 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 2.9E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00070 1fea249922108d315892aac78a181a1c 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 2.9E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00070 1fea249922108d315892aac78a181a1c 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 2.9E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00070 1fea249922108d315892aac78a181a1c 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 2.9E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00070 1fea249922108d315892aac78a181a1c 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 2.9E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00070 1fea249922108d315892aac78a181a1c 690 SMART SM00836 585 685 3.9E-4 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 P40_00070 1fea249922108d315892aac78a181a1c 690 Pfam PF05746 DALR anticodon binding domain 582 680 3.2E-9 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 P40_00070 1fea249922108d315892aac78a181a1c 690 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 689 1.4E-250 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00070 1fea249922108d315892aac78a181a1c 690 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 5.7E-214 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00070 1fea249922108d315892aac78a181a1c 690 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 688 25.84 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P40_00070 1fea249922108d315892aac78a181a1c 690 SUPERFAMILY SSF109604 340 491 4.08E-14 T 13-10-2018 P40_13300 06d04a6a04361873925cada31d088b28 462 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 3.8E-101 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_13300 06d04a6a04361873925cada31d088b28 462 Pfam PF01554 MatE 17 176 2.2E-31 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_13300 06d04a6a04361873925cada31d088b28 462 Pfam PF01554 MatE 243 403 1.8E-35 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_13300 06d04a6a04361873925cada31d088b28 462 PIRSF PIRSF006603 8 454 6.1E-59 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_03160 7d27ee260efc90a35e9ebfcc946d8805 187 Gene3D G3DSA:3.30.450.20 12 119 1.2E-16 T 13-10-2018 P40_03160 7d27ee260efc90a35e9ebfcc946d8805 187 Pfam PF00196 Bacterial regulatory proteins, luxR family 128 181 5.6E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_03160 7d27ee260efc90a35e9ebfcc946d8805 187 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 100 1.8E-11 T 13-10-2018 IPR000014 PAS domain P40_03160 7d27ee260efc90a35e9ebfcc946d8805 187 SUPERFAMILY SSF55785 13 108 3.49E-12 T 13-10-2018 IPR035965 PAS domain superfamily P40_03160 7d27ee260efc90a35e9ebfcc946d8805 187 Pfam PF13426 PAS domain 30 103 1.3E-6 T 13-10-2018 IPR000014 PAS domain P40_03160 7d27ee260efc90a35e9ebfcc946d8805 187 SMART SM00421 126 183 5.5E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_03160 7d27ee260efc90a35e9ebfcc946d8805 187 Gene3D G3DSA:1.10.10.10 120 185 2.5E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_03160 7d27ee260efc90a35e9ebfcc946d8805 187 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 159 1.3E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_03160 7d27ee260efc90a35e9ebfcc946d8805 187 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 129 143 1.3E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_03160 7d27ee260efc90a35e9ebfcc946d8805 187 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 171 1.3E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_03160 7d27ee260efc90a35e9ebfcc946d8805 187 SUPERFAMILY SSF46894 109 184 2.96E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_04345 a744fb8d9642dc3fb553b7c2824c0ed4 189 Pfam PF00857 Isochorismatase family 11 186 1.3E-34 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 P40_04345 a744fb8d9642dc3fb553b7c2824c0ed4 189 Gene3D G3DSA:3.40.50.850 6 189 3.0E-56 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_04345 a744fb8d9642dc3fb553b7c2824c0ed4 189 SUPERFAMILY SSF52499 8 186 6.02E-47 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_15865 ca017cf7cb91591cbbd5e0a289d5f4f9 518 SUPERFAMILY SSF56801 9 512 4.84E-133 T 13-10-2018 P40_15865 ca017cf7cb91591cbbd5e0a289d5f4f9 518 Gene3D G3DSA:3.40.50.12780 2 410 9.6E-94 T 13-10-2018 P40_15865 ca017cf7cb91591cbbd5e0a289d5f4f9 518 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_15865 ca017cf7cb91591cbbd5e0a289d5f4f9 518 Gene3D G3DSA:3.30.300.310 411 513 1.4E-29 T 13-10-2018 P40_15865 ca017cf7cb91591cbbd5e0a289d5f4f9 518 Pfam PF00501 AMP-binding enzyme 18 415 4.1E-87 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_15865 ca017cf7cb91591cbbd5e0a289d5f4f9 518 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 499 2.9E-18 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_15495 273fb08553145de56490f32ffb155877 344 Pfam PF00005 ABC transporter 43 201 3.2E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_15495 273fb08553145de56490f32ffb155877 344 Gene3D G3DSA:3.40.50.300 19 343 2.6E-104 T 13-10-2018 P40_15495 273fb08553145de56490f32ffb155877 344 SMART SM00382 51 251 2.5E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_15495 273fb08553145de56490f32ffb155877 344 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_15495 273fb08553145de56490f32ffb155877 344 SUPERFAMILY SSF52540 22 272 7.38E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_15495 273fb08553145de56490f32ffb155877 344 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 251 337 2.9E-29 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 P40_15495 273fb08553145de56490f32ffb155877 344 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 253 318 3.7E-21 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 P40_20425 28ab2d48df9a92822fc1c76147d761b4 280 SUPERFAMILY SSF51197 36 273 6.96E-57 T 13-10-2018 P40_20425 28ab2d48df9a92822fc1c76147d761b4 280 Gene3D G3DSA:2.60.120.620 25 277 1.6E-73 T 13-10-2018 P40_20425 28ab2d48df9a92822fc1c76147d761b4 280 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 42 219 3.3E-31 T 13-10-2018 IPR008775 Phytanoyl-CoA dioxygenase P40_04035 39da7249a422432fe9e0830aaabeb722 294 Gene3D G3DSA:1.10.10.10 8 97 1.3E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_04035 39da7249a422432fe9e0830aaabeb722 294 Gene3D G3DSA:3.40.190.10 164 263 1.2E-44 T 13-10-2018 P40_04035 39da7249a422432fe9e0830aaabeb722 294 Pfam PF03466 LysR substrate binding domain 92 290 1.4E-31 T 13-10-2018 IPR005119 LysR, substrate-binding P40_04035 39da7249a422432fe9e0830aaabeb722 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 5.5E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_04035 39da7249a422432fe9e0830aaabeb722 294 SUPERFAMILY SSF46785 5 88 3.27E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_04035 39da7249a422432fe9e0830aaabeb722 294 SUPERFAMILY SSF53850 93 293 2.71E-33 T 13-10-2018 P40_04035 39da7249a422432fe9e0830aaabeb722 294 Gene3D G3DSA:3.40.190.10 104 288 1.2E-44 T 13-10-2018 P40_04035 39da7249a422432fe9e0830aaabeb722 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 4.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_04035 39da7249a422432fe9e0830aaabeb722 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 4.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_04035 39da7249a422432fe9e0830aaabeb722 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 4.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_04965 7bf317b79fbe4405c41ca74a234a8e31 211 Pfam PF09601 Protein of unknown function (DUF2459) 25 178 3.6E-34 T 13-10-2018 IPR011727 Conserved hypothetical protein CHP02117 P40_13660 612e3cab69d8b96596267ab7242f06bb 328 SUPERFAMILY SSF51735 3 324 2.08E-59 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_13660 612e3cab69d8b96596267ab7242f06bb 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 224 2.1E-28 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 P40_13660 612e3cab69d8b96596267ab7242f06bb 328 Gene3D G3DSA:3.40.50.720 2 328 7.4E-98 T 13-10-2018 P40_18410 fd9daf8802fe6301e6ec2ce9cad6aa70 363 Gene3D G3DSA:3.30.420.40 13 358 2.0E-122 T 13-10-2018 P40_18410 fd9daf8802fe6301e6ec2ce9cad6aa70 363 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 363 40.069 T 13-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 P40_18410 fd9daf8802fe6301e6ec2ce9cad6aa70 363 SUPERFAMILY SSF53067 6 336 1.13E-29 T 13-10-2018 P40_18410 fd9daf8802fe6301e6ec2ce9cad6aa70 363 Gene3D G3DSA:3.30.420.40 145 323 2.0E-122 T 13-10-2018 P40_18410 fd9daf8802fe6301e6ec2ce9cad6aa70 363 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 361 2.8E-137 T 13-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 P40_12045 71d06a2fa718d89e535385771be476f5 376 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 286 373 2.1E-19 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 P40_12045 71d06a2fa718d89e535385771be476f5 376 Gene3D G3DSA:3.40.47.10 220 374 8.6E-39 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_12045 71d06a2fa718d89e535385771be476f5 376 SUPERFAMILY SSF53901 4 374 1.97E-52 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_12045 71d06a2fa718d89e535385771be476f5 376 Gene3D G3DSA:3.40.47.10 1 217 4.9E-58 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_12045 71d06a2fa718d89e535385771be476f5 376 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 152 233 1.2E-18 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 P40_10750 5545b1237d3a3cc8eddce6cbdb216197 157 Pfam PF10675 Protein of unknown function (DUF2489) 30 139 3.3E-23 T 13-10-2018 IPR019617 Domain of unknown function DUF2489 P40_06990 f052aca6edc1171424fb6b4316728169 257 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 96 250 2.0E-50 T 13-10-2018 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system P40_06990 f052aca6edc1171424fb6b4316728169 257 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 8 94 3.0E-28 T 13-10-2018 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain P40_09320 c8fceec7277c5d8d7f6afd16e631a21f 385 Gene3D G3DSA:3.40.50.720 91 257 8.8E-100 T 13-10-2018 P40_09320 c8fceec7277c5d8d7f6afd16e631a21f 385 Gene3D G3DSA:3.30.1370.170 292 367 5.9E-9 T 13-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 P40_09320 c8fceec7277c5d8d7f6afd16e631a21f 385 Pfam PF11890 Domain of unknown function (DUF3410) 298 350 4.5E-8 T 13-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 P40_09320 c8fceec7277c5d8d7f6afd16e631a21f 385 Gene3D G3DSA:3.40.50.720 2 274 8.8E-100 T 13-10-2018 P40_09320 c8fceec7277c5d8d7f6afd16e631a21f 385 SUPERFAMILY SSF51735 90 254 3.0E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_09320 c8fceec7277c5d8d7f6afd16e631a21f 385 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 246 9.8E-27 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 P40_09320 c8fceec7277c5d8d7f6afd16e631a21f 385 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 355 40.681 T 13-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 P40_09320 c8fceec7277c5d8d7f6afd16e631a21f 385 SUPERFAMILY SSF52283 12 107 1.87E-16 T 13-10-2018 P40_09320 c8fceec7277c5d8d7f6afd16e631a21f 385 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 118 145 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 P40_09320 c8fceec7277c5d8d7f6afd16e631a21f 385 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 33 107 1.1E-14 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 P40_04790 186453385b8fb61cf9d6b9f96dc8aeaf 267 PIRSF PIRSF001356 3 267 1.2E-134 T 13-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 P40_04790 186453385b8fb61cf9d6b9f96dc8aeaf 267 Gene3D G3DSA:3.60.90.10 98 191 2.8E-7 T 13-10-2018 P40_04790 186453385b8fb61cf9d6b9f96dc8aeaf 267 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 8 267 2.1E-139 T 13-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 P40_04790 186453385b8fb61cf9d6b9f96dc8aeaf 267 Pfam PF02675 S-adenosylmethionine decarboxylase 43 175 1.4E-32 T 13-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 P40_04790 186453385b8fb61cf9d6b9f96dc8aeaf 267 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 267 161.986 T 13-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 P40_04790 186453385b8fb61cf9d6b9f96dc8aeaf 267 Gene3D G3DSA:3.30.360.110 40 89 4.8E-5 T 13-10-2018 P40_04790 186453385b8fb61cf9d6b9f96dc8aeaf 267 SUPERFAMILY SSF56276 46 179 3.65E-24 T 13-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 P40_21415 0ca49cf8668df7a12dd4621d7c441296 387 Pfam PF00487 Fatty acid desaturase 113 327 2.0E-31 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 P40_00625 46e74e926a22755b3d10e1ed287ed7de 344 SUPERFAMILY SSF51556 33 338 2.53E-35 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_00625 46e74e926a22755b3d10e1ed287ed7de 344 Pfam PF04909 Amidohydrolase 34 338 2.1E-33 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P40_00625 46e74e926a22755b3d10e1ed287ed7de 344 Gene3D G3DSA:3.20.20.140 31 342 1.5E-73 T 13-10-2018 P40_20010 5437e7f098974fb2d5ad7e7fb46fe4de 520 Gene3D G3DSA:3.40.50.12780 5 402 4.5E-97 T 13-10-2018 P40_20010 5437e7f098974fb2d5ad7e7fb46fe4de 520 Gene3D G3DSA:3.30.300.310 406 512 2.1E-29 T 13-10-2018 P40_20010 5437e7f098974fb2d5ad7e7fb46fe4de 520 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 497 4.4E-16 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_20010 5437e7f098974fb2d5ad7e7fb46fe4de 520 Pfam PF00501 AMP-binding enzyme 8 410 1.5E-84 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_20010 5437e7f098974fb2d5ad7e7fb46fe4de 520 ProSitePatterns PS00455 Putative AMP-binding domain signature. 159 170 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_20010 5437e7f098974fb2d5ad7e7fb46fe4de 520 SUPERFAMILY SSF56801 7 509 3.66E-132 T 13-10-2018 P40_05210 d98cd6319c8cfbf470c7514381dcfa7d 266 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 7 265 2.0E-110 T 13-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 P40_05210 d98cd6319c8cfbf470c7514381dcfa7d 266 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 8 263 7.1E-96 T 13-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 P40_05210 d98cd6319c8cfbf470c7514381dcfa7d 266 Gene3D G3DSA:1.10.3720.10 8 265 3.8E-58 T 13-10-2018 IPR035906 MetI-like superfamily P40_05210 d98cd6319c8cfbf470c7514381dcfa7d 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 69 265 4.9E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_05210 d98cd6319c8cfbf470c7514381dcfa7d 266 SUPERFAMILY SSF161098 16 256 1.03E-49 T 13-10-2018 IPR035906 MetI-like superfamily P40_01340 424321641ba7660ce282f89d8d917fdf 194 PIRSF PIRSF006806 6 194 3.1E-30 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase P40_01340 424321641ba7660ce282f89d8d917fdf 194 Gene3D G3DSA:3.40.50.10420 7 194 2.1E-46 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily P40_01340 424321641ba7660ce282f89d8d917fdf 194 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 10 190 1.4E-34 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase P40_01340 424321641ba7660ce282f89d8d917fdf 194 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 9 190 1.1E-43 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase P40_01340 424321641ba7660ce282f89d8d917fdf 194 SUPERFAMILY SSF100950 8 193 1.09E-45 T 13-10-2018 IPR037171 NagB/RpiA transferase-like P40_02675 78a944310e2962328553bcd9a6b3d12c 105 Pfam PF01845 CcdB protein 3 104 1.1E-33 T 13-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 P40_02675 78a944310e2962328553bcd9a6b3d12c 105 Gene3D G3DSA:2.30.30.110 1 105 1.7E-35 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor P40_02675 78a944310e2962328553bcd9a6b3d12c 105 SUPERFAMILY SSF50118 2 105 1.44E-30 T 13-10-2018 P40_02675 78a944310e2962328553bcd9a6b3d12c 105 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 18 104 1.0E-16 T 13-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 P40_15615 1849bdb31c8deb988665610845d3d353 301 Gene3D G3DSA:1.10.10.10 1 89 6.3E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_15615 1849bdb31c8deb988665610845d3d353 301 Pfam PF03466 LysR substrate binding domain 88 293 1.1E-30 T 13-10-2018 IPR005119 LysR, substrate-binding P40_15615 1849bdb31c8deb988665610845d3d353 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.2E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_15615 1849bdb31c8deb988665610845d3d353 301 Gene3D G3DSA:3.40.190.290 91 298 1.4E-31 T 13-10-2018 P40_15615 1849bdb31c8deb988665610845d3d353 301 SUPERFAMILY SSF46785 3 111 9.38E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_15615 1849bdb31c8deb988665610845d3d353 301 SUPERFAMILY SSF53850 83 296 2.48E-29 T 13-10-2018 P40_15915 fccead30c76f4c4a795448cae3a4aed2 218 Pfam PF04344 Chemotaxis phosphatase, CheZ 17 218 2.8E-75 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 P40_15915 fccead30c76f4c4a795448cae3a4aed2 218 Gene3D G3DSA:1.10.287.500 36 169 3.0E-50 T 13-10-2018 P40_15915 fccead30c76f4c4a795448cae3a4aed2 218 Gene3D G3DSA:1.20.5.590 8 35 4.5E-7 T 13-10-2018 P40_15915 fccead30c76f4c4a795448cae3a4aed2 218 PIRSF PIRSF002884 2 218 7.1E-78 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 P40_15915 fccead30c76f4c4a795448cae3a4aed2 218 SUPERFAMILY SSF75708 15 217 1.27E-62 T 13-10-2018 P40_00835 319e570fec2083d3cf36bc21f0841cd7 429 SUPERFAMILY SSF55035 111 219 4.45E-32 T 13-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 P40_00835 319e570fec2083d3cf36bc21f0841cd7 429 Gene3D G3DSA:3.90.770.10 42 375 3.9E-140 T 13-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 P40_00835 319e570fec2083d3cf36bc21f0841cd7 429 ProSitePatterns PS01192 Hydroxymethylglutaryl-coenzyme A reductases signature 3. 371 384 - T 13-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 P40_00835 319e570fec2083d3cf36bc21f0841cd7 429 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 174 192 3.4E-6 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 P40_00835 319e570fec2083d3cf36bc21f0841cd7 429 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 77 97 3.4E-6 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 P40_00835 319e570fec2083d3cf36bc21f0841cd7 429 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 313 334 3.4E-6 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 P40_00835 319e570fec2083d3cf36bc21f0841cd7 429 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 50 71 3.4E-6 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 P40_00835 319e570fec2083d3cf36bc21f0841cd7 429 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 16 386 6.4E-114 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 P40_00835 319e570fec2083d3cf36bc21f0841cd7 429 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 4 386 8.7E-129 T 13-10-2018 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 P40_00835 319e570fec2083d3cf36bc21f0841cd7 429 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 325 332 - T 13-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 P40_00835 319e570fec2083d3cf36bc21f0841cd7 429 Gene3D G3DSA:1.10.8.660 376 426 2.4E-15 T 13-10-2018 P40_00835 319e570fec2083d3cf36bc21f0841cd7 429 Gene3D G3DSA:3.30.70.420 111 220 3.9E-140 T 13-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 P40_00835 319e570fec2083d3cf36bc21f0841cd7 429 SUPERFAMILY SSF56542 6 427 1.44E-104 T 13-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 P40_00835 319e570fec2083d3cf36bc21f0841cd7 429 ProSitePatterns PS00066 Hydroxymethylglutaryl-coenzyme A reductases signature 1. 176 190 - T 13-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 P40_01170 0688f684cc168192323ce8f7a68e6857 470 SUPERFAMILY SSF63411 38 245 9.83E-41 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 P40_01170 0688f684cc168192323ce8f7a68e6857 470 Gene3D G3DSA:3.30.830.10 263 453 1.1E-51 T 13-10-2018 P40_01170 0688f684cc168192323ce8f7a68e6857 470 Pfam PF05193 Peptidase M16 inactive domain 207 382 6.3E-28 T 13-10-2018 IPR007863 Peptidase M16, C-terminal P40_01170 0688f684cc168192323ce8f7a68e6857 470 SUPERFAMILY SSF63411 268 457 1.67E-44 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 P40_01170 0688f684cc168192323ce8f7a68e6857 470 Gene3D G3DSA:3.30.830.10 43 253 2.0E-43 T 13-10-2018 P40_13055 00e3728dbf84c0192ea060b8ea767a59 479 SUPERFAMILY SSF56059 21 467 8.14E-69 T 13-10-2018 P40_13055 00e3728dbf84c0192ea060b8ea767a59 479 Gene3D G3DSA:3.40.50.11290 214 311 4.4E-43 T 13-10-2018 P40_13055 00e3728dbf84c0192ea060b8ea767a59 479 Gene3D G3DSA:3.30.1490.270 349 408 5.3E-27 T 13-10-2018 P40_13055 00e3728dbf84c0192ea060b8ea767a59 479 PIRSF PIRSF005522 1 478 1.2E-231 T 13-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 P40_13055 00e3728dbf84c0192ea060b8ea767a59 479 Pfam PF14403 Circularly permuted ATP-grasp type 2 78 452 2.8E-164 T 13-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 P40_04735 c60ab76f8af288c8c8b6b6c390ceccc1 209 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 29 208 1.8E-80 T 13-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 P40_04735 c60ab76f8af288c8c8b6b6c390ceccc1 209 SUPERFAMILY SSF81452 18 206 6.54E-58 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04735 c60ab76f8af288c8c8b6b6c390ceccc1 209 Gene3D G3DSA:1.20.120.80 23 208 9.2E-57 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04735 c60ab76f8af288c8c8b6b6c390ceccc1 209 Pfam PF00510 Cytochrome c oxidase subunit III 25 206 6.6E-16 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_06520 af7b4d305509940043eb2a585555cc4b 235 SUPERFAMILY SSF54637 16 213 5.48E-30 T 13-10-2018 IPR029069 HotDog domain superfamily P40_06520 af7b4d305509940043eb2a585555cc4b 235 Gene3D G3DSA:1.20.58.350 34 82 1.4E-42 T 13-10-2018 P40_06520 af7b4d305509940043eb2a585555cc4b 235 Gene3D G3DSA:3.10.129.10 83 213 1.4E-42 T 13-10-2018 P40_13370 bbf5afef62aa4d87627275a5f15b5b0e 319 SUPERFAMILY SSF111369 30 108 2.09E-7 T 13-10-2018 P40_13370 bbf5afef62aa4d87627275a5f15b5b0e 319 Gene3D G3DSA:2.40.50.100 191 229 3.3E-10 T 13-10-2018 P40_13370 bbf5afef62aa4d87627275a5f15b5b0e 319 Gene3D G3DSA:1.10.287.470 66 90 8.9E-10 T 13-10-2018 P40_13370 bbf5afef62aa4d87627275a5f15b5b0e 319 Gene3D G3DSA:2.40.50.100 31 65 8.9E-10 T 13-10-2018 P40_13370 bbf5afef62aa4d87627275a5f15b5b0e 319 SUPERFAMILY SSF111369 101 158 9.68E-5 T 13-10-2018 P40_13370 bbf5afef62aa4d87627275a5f15b5b0e 319 Pfam PF13437 HlyD family secretion protein 195 274 1.3E-7 T 13-10-2018 P40_13370 bbf5afef62aa4d87627275a5f15b5b0e 319 Gene3D G3DSA:1.10.287.470 167 190 3.3E-10 T 13-10-2018 P40_13370 bbf5afef62aa4d87627275a5f15b5b0e 319 Gene3D G3DSA:2.40.30.170 230 268 3.3E-10 T 13-10-2018 P40_13370 bbf5afef62aa4d87627275a5f15b5b0e 319 Gene3D G3DSA:1.10.287.470 97 161 6.4E-12 T 13-10-2018 P40_13370 bbf5afef62aa4d87627275a5f15b5b0e 319 Pfam PF13533 Biotin-lipoyl like 43 80 2.5E-6 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain P40_02925 b48be8bf6504b47521bdc871664afe15 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 9.5E-50 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 P40_02925 b48be8bf6504b47521bdc871664afe15 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 12 39 9.5E-50 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 P40_02925 b48be8bf6504b47521bdc871664afe15 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 9.5E-50 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 P40_02925 b48be8bf6504b47521bdc871664afe15 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 158 186 9.5E-50 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 P40_02925 b48be8bf6504b47521bdc871664afe15 259 ProSitePatterns PS01218 TatC family signature. 158 177 - T 13-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site P40_02925 b48be8bf6504b47521bdc871664afe15 259 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 13 230 6.7E-71 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 P40_02925 b48be8bf6504b47521bdc871664afe15 259 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 11 242 16.406 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 P40_02925 b48be8bf6504b47521bdc871664afe15 259 Pfam PF00902 Sec-independent protein translocase protein (TatC) 16 225 1.9E-62 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 P40_06270 50568d8ad0e137262cdc1cb734d73223 155 SMART SM00347 39 139 8.2E-25 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_06270 50568d8ad0e137262cdc1cb734d73223 155 Pfam PF01047 MarR family 46 102 2.3E-13 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_06270 50568d8ad0e137262cdc1cb734d73223 155 Gene3D G3DSA:1.10.10.10 11 153 3.8E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_06270 50568d8ad0e137262cdc1cb734d73223 155 SUPERFAMILY SSF46785 21 151 1.92E-30 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_00285 baf428c4851745816fb3d7097bdfc388 287 Pfam PF03466 LysR substrate binding domain 87 285 1.5E-42 T 13-10-2018 IPR005119 LysR, substrate-binding P40_00285 baf428c4851745816fb3d7097bdfc388 287 Gene3D G3DSA:3.40.190.290 90 286 2.7E-43 T 13-10-2018 P40_00285 baf428c4851745816fb3d7097bdfc388 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.0E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_00285 baf428c4851745816fb3d7097bdfc388 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.0E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_00285 baf428c4851745816fb3d7097bdfc388 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.0E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_00285 baf428c4851745816fb3d7097bdfc388 287 Gene3D G3DSA:1.10.10.10 1 84 5.2E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_00285 baf428c4851745816fb3d7097bdfc388 287 SUPERFAMILY SSF53850 88 285 5.12E-37 T 13-10-2018 P40_00285 baf428c4851745816fb3d7097bdfc388 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-23 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_00285 baf428c4851745816fb3d7097bdfc388 287 SUPERFAMILY SSF46785 1 86 4.69E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_15335 d9ac537f4c4542f50aade3c54c03648a 240 Gene3D G3DSA:1.10.10.10 131 239 5.7E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_15335 d9ac537f4c4542f50aade3c54c03648a 240 SUPERFAMILY SSF52172 5 131 7.54E-40 T 13-10-2018 IPR011006 CheY-like superfamily P40_15335 d9ac537f4c4542f50aade3c54c03648a 240 Pfam PF00072 Response regulator receiver domain 11 120 3.0E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_15335 d9ac537f4c4542f50aade3c54c03648a 240 SUPERFAMILY SSF46894 133 234 5.1E-28 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_15335 d9ac537f4c4542f50aade3c54c03648a 240 SMART SM00862 157 233 7.2E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_15335 d9ac537f4c4542f50aade3c54c03648a 240 Gene3D G3DSA:3.40.50.2300 2 129 2.7E-36 T 13-10-2018 P40_15335 d9ac537f4c4542f50aade3c54c03648a 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 4.5E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_15335 d9ac537f4c4542f50aade3c54c03648a 240 SMART SM00448 9 119 1.8E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_18740 26cfe741bb88d5ccccad628badca24ca 275 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 264 35.785 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_18740 26cfe741bb88d5ccccad628badca24ca 275 SUPERFAMILY SSF51735 1 265 1.28E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_18740 26cfe741bb88d5ccccad628badca24ca 275 PIRSF PIRSF000161 1 266 7.1E-89 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_18740 26cfe741bb88d5ccccad628badca24ca 275 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 127 263 2.5E-43 T 13-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_18740 26cfe741bb88d5ccccad628badca24ca 275 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 264 3.9E-102 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_18740 26cfe741bb88d5ccccad628badca24ca 275 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 124 5.2E-40 T 13-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_18740 26cfe741bb88d5ccccad628badca24ca 275 Gene3D G3DSA:3.30.360.10 126 233 1.6E-103 T 13-10-2018 P40_18740 26cfe741bb88d5ccccad628badca24ca 275 Gene3D G3DSA:3.40.50.720 2 263 1.6E-103 T 13-10-2018 P40_18740 26cfe741bb88d5ccccad628badca24ca 275 SUPERFAMILY SSF55347 126 235 1.98E-37 T 13-10-2018 P40_18740 26cfe741bb88d5ccccad628badca24ca 275 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 149 166 - T 13-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_07910 5acfc81744cde787bb54f2aa3f970fc2 80 SUPERFAMILY SSF47598 2 68 9.27E-18 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 P40_07910 5acfc81744cde787bb54f2aa3f970fc2 80 Gene3D G3DSA:1.10.1220.10 10 57 7.1E-16 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 P40_15785 5236e586214f3294be7b172031a0706d 265 SUPERFAMILY SSF53474 7 260 1.47E-41 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_15785 5236e586214f3294be7b172031a0706d 265 Gene3D G3DSA:3.40.50.1820 7 259 2.4E-39 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_15785 5236e586214f3294be7b172031a0706d 265 Pfam PF12697 Alpha/beta hydrolase family 34 253 1.6E-16 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_09425 13c92f3bbe61e5d8d90d2ac8c7de518f 420 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 305 324 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 P40_09425 13c92f3bbe61e5d8d90d2ac8c7de518f 420 SUPERFAMILY SSF53659 4 418 1.67E-144 T 13-10-2018 P40_09425 13c92f3bbe61e5d8d90d2ac8c7de518f 420 SMART SM01329 30 414 1.6E-174 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 P40_09425 13c92f3bbe61e5d8d90d2ac8c7de518f 420 Gene3D G3DSA:3.40.718.10 1 419 6.3E-183 T 13-10-2018 P40_09425 13c92f3bbe61e5d8d90d2ac8c7de518f 420 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 418 1.1E-220 T 13-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 P40_09425 13c92f3bbe61e5d8d90d2ac8c7de518f 420 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 414 6.6E-115 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 P40_04070 ca023722faa4dbfc2cc9416c76ba11b8 303 Gene3D G3DSA:3.90.650.10 142 303 6.1E-39 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P40_04070 ca023722faa4dbfc2cc9416c76ba11b8 303 Pfam PF00586 AIR synthase related protein, N-terminal domain 25 134 1.3E-22 T 13-10-2018 IPR016188 PurM-like, N-terminal domain P40_04070 ca023722faa4dbfc2cc9416c76ba11b8 303 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 303 25.853 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 P40_04070 ca023722faa4dbfc2cc9416c76ba11b8 303 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 303 1.7E-84 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 P40_04070 ca023722faa4dbfc2cc9416c76ba11b8 303 PIRSF PIRSF005303 1 303 1.8E-73 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 P40_04070 ca023722faa4dbfc2cc9416c76ba11b8 303 SUPERFAMILY SSF56042 139 289 1.13E-29 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P40_04070 ca023722faa4dbfc2cc9416c76ba11b8 303 Gene3D G3DSA:3.30.1330.10 1 140 9.5E-48 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P40_04070 ca023722faa4dbfc2cc9416c76ba11b8 303 SUPERFAMILY SSF55326 3 137 2.24E-35 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P40_14245 8ea0452b71669bd420c6102443e8894e 1248 Pfam PF00384 Molybdopterin oxidoreductase 108 835 7.7E-168 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_14245 8ea0452b71669bd420c6102443e8894e 1248 SUPERFAMILY SSF53706 5 1071 0.0 T 13-10-2018 P40_14245 8ea0452b71669bd420c6102443e8894e 1248 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 779 796 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 P40_14245 8ea0452b71669bd420c6102443e8894e 1248 Pfam PF01568 Molydopterin dinucleotide binding domain 1089 1201 9.1E-22 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 P40_14245 8ea0452b71669bd420c6102443e8894e 1248 SMART SM00926 43 105 1.3E-7 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_14245 8ea0452b71669bd420c6102443e8894e 1248 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 P40_14245 8ea0452b71669bd420c6102443e8894e 1248 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 6.7E-16 T 13-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 P40_14245 8ea0452b71669bd420c6102443e8894e 1248 SUPERFAMILY SSF50692 1078 1236 1.04E-46 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily P40_14245 8ea0452b71669bd420c6102443e8894e 1248 Gene3D G3DSA:3.40.50.12440 44 1246 0.0 T 13-10-2018 P40_14245 8ea0452b71669bd420c6102443e8894e 1248 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1236 0.0 T 13-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 P40_07100 c5fd9990b6de021da7928d1fedb9c321 325 PIRSF PIRSF005427 1 325 1.7E-86 T 13-10-2018 IPR005588 MucB/RseB P40_07100 c5fd9990b6de021da7928d1fedb9c321 325 Gene3D G3DSA:2.50.20.10 29 205 1.3E-47 T 13-10-2018 P40_07100 c5fd9990b6de021da7928d1fedb9c321 325 Gene3D G3DSA:3.30.200.100 222 325 3.8E-20 T 13-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily P40_07100 c5fd9990b6de021da7928d1fedb9c321 325 Pfam PF03888 MucB/RseB N-terminal domain 31 201 8.3E-50 T 13-10-2018 IPR033434 MucB/RseB, N-terminal P40_07100 c5fd9990b6de021da7928d1fedb9c321 325 Pfam PF17188 MucB/RseB C-terminal domain 226 320 1.5E-20 T 13-10-2018 IPR033436 MucB/RseB, C-terminal P40_09625 bda6f7bb94b562926d1566fce2009a68 345 Pfam PF01636 Phosphotransferase enzyme family 32 257 4.0E-32 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase P40_09625 bda6f7bb94b562926d1566fce2009a68 345 Gene3D G3DSA:3.30.200.20 7 108 2.4E-21 T 13-10-2018 P40_09625 bda6f7bb94b562926d1566fce2009a68 345 SUPERFAMILY SSF56112 9 340 3.79E-48 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_09625 bda6f7bb94b562926d1566fce2009a68 345 Gene3D G3DSA:3.90.1200.10 116 345 1.6E-53 T 13-10-2018 P40_03960 624d81b9364eba5bedf55dad195acb3a 248 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_03960 624d81b9364eba5bedf55dad195acb3a 248 Pfam PF00005 ABC transporter 32 176 5.5E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_03960 624d81b9364eba5bedf55dad195acb3a 248 SUPERFAMILY SSF52540 14 246 1.85E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03960 624d81b9364eba5bedf55dad195acb3a 248 SMART SM00382 41 227 7.8E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_03960 624d81b9364eba5bedf55dad195acb3a 248 Gene3D G3DSA:3.40.50.300 13 248 2.3E-64 T 13-10-2018 P40_12440 ebd1b88523e20cbbf692e8ef61b29e40 223 Gene3D G3DSA:3.40.50.10420 37 220 1.9E-36 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily P40_12440 ebd1b88523e20cbbf692e8ef61b29e40 223 SUPERFAMILY SSF100950 37 221 4.18E-43 T 13-10-2018 IPR037171 NagB/RpiA transferase-like P40_12440 ebd1b88523e20cbbf692e8ef61b29e40 223 Pfam PF02589 LUD domain 43 220 6.8E-29 T 13-10-2018 IPR003741 LUD domain P40_02610 3572441027a56cb285d05b9347a42792 351 SUPERFAMILY SSF52540 16 258 2.1E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_02610 3572441027a56cb285d05b9347a42792 351 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 326 1.6E-26 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 P40_02610 3572441027a56cb285d05b9347a42792 351 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 306 3.1E-14 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 P40_02610 3572441027a56cb285d05b9347a42792 351 Gene3D G3DSA:3.40.50.300 14 337 1.5E-97 T 13-10-2018 P40_02610 3572441027a56cb285d05b9347a42792 351 Pfam PF00005 ABC transporter 36 185 2.6E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_02610 3572441027a56cb285d05b9347a42792 351 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_02610 3572441027a56cb285d05b9347a42792 351 SMART SM00382 44 236 1.8E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_11485 1366a88a3a3d819153d474f1acafd20b 701 Pfam PF04632 Fusaric acid resistance protein family 17 673 6.4E-160 T 13-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 P40_02660 891e33bf82d01e2cb1e30dd5ff68f93a 484 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 2 207 1.7E-19 T 13-10-2018 P40_02660 891e33bf82d01e2cb1e30dd5ff68f93a 484 Gene3D G3DSA:3.50.50.60 302 479 1.2E-37 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_02660 891e33bf82d01e2cb1e30dd5ff68f93a 484 SUPERFAMILY SSF51905 1 403 6.05E-62 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_02660 891e33bf82d01e2cb1e30dd5ff68f93a 484 Gene3D G3DSA:3.50.50.60 1 161 7.7E-57 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_18660 db8258ddc9bbfc862993f8fe45ec42df 136 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 14 103 2.0E-20 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 P40_18660 db8258ddc9bbfc862993f8fe45ec42df 136 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 11 116 24.946 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 P40_18660 db8258ddc9bbfc862993f8fe45ec42df 136 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 11 118 3.0E-24 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 P40_18660 db8258ddc9bbfc862993f8fe45ec42df 136 Gene3D G3DSA:3.30.300.20 7 109 3.0E-31 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta P40_18660 db8258ddc9bbfc862993f8fe45ec42df 136 SUPERFAMILY SSF89919 9 119 1.96E-31 T 13-10-2018 IPR023799 Ribosome-binding factor A domain superfamily P40_18660 db8258ddc9bbfc862993f8fe45ec42df 136 Pfam PF02033 Ribosome-binding factor A 12 116 8.4E-29 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 P40_03215 e913c38037342c2b196bb918d403a2da 288 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 286 53.616 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_03215 e913c38037342c2b196bb918d403a2da 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 1.4E-21 T 13-10-2018 IPR002220 DapA-like GO:0016829 P40_03215 e913c38037342c2b196bb918d403a2da 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 1.4E-21 T 13-10-2018 IPR002220 DapA-like GO:0016829 P40_03215 e913c38037342c2b196bb918d403a2da 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 1.4E-21 T 13-10-2018 IPR002220 DapA-like GO:0016829 P40_03215 e913c38037342c2b196bb918d403a2da 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 1.4E-21 T 13-10-2018 IPR002220 DapA-like GO:0016829 P40_03215 e913c38037342c2b196bb918d403a2da 288 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 37 54 - T 13-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_03215 e913c38037342c2b196bb918d403a2da 288 SUPERFAMILY SSF51569 1 286 1.47E-89 T 13-10-2018 P40_03215 e913c38037342c2b196bb918d403a2da 288 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 284 5.1E-83 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 P40_03215 e913c38037342c2b196bb918d403a2da 288 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 162 - T 13-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 P40_03215 e913c38037342c2b196bb918d403a2da 288 Gene3D G3DSA:3.20.20.70 1 287 5.3E-99 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_03215 e913c38037342c2b196bb918d403a2da 288 Pfam PF00701 Dihydrodipicolinate synthetase family 2 285 1.4E-78 T 13-10-2018 IPR002220 DapA-like GO:0016829 P40_03215 e913c38037342c2b196bb918d403a2da 288 SMART SM01130 1 288 7.2E-114 T 13-10-2018 IPR002220 DapA-like GO:0016829 P40_03215 e913c38037342c2b196bb918d403a2da 288 PIRSF PIRSF001365 1 287 1.8E-76 T 13-10-2018 IPR002220 DapA-like GO:0016829 P40_06595 07e3a0091dc215ead97e849adafdcf05 303 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 14 301 3.9E-102 T 13-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 P40_06595 07e3a0091dc215ead97e849adafdcf05 303 Gene3D G3DSA:1.10.443.10 115 295 1.3E-71 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 P40_06595 07e3a0091dc215ead97e849adafdcf05 303 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 8 301 60.85 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 P40_06595 07e3a0091dc215ead97e849adafdcf05 303 SUPERFAMILY SSF56349 11 292 1.41E-62 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 P40_06595 07e3a0091dc215ead97e849adafdcf05 303 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 95 9.0E-24 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 P40_06595 07e3a0091dc215ead97e849adafdcf05 303 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 301 59.472 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD P40_06595 07e3a0091dc215ead97e849adafdcf05 303 Pfam PF00589 Phage integrase family 117 287 4.9E-52 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 P40_06595 07e3a0091dc215ead97e849adafdcf05 303 Gene3D G3DSA:1.10.150.130 5 112 5.1E-26 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal P40_06595 07e3a0091dc215ead97e849adafdcf05 303 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 14 301 5.0E-118 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 P40_09025 743cd19d6734550561ba767fbddc3446 86 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 18.37 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 P40_09025 743cd19d6734550561ba767fbddc3446 86 SUPERFAMILY SSF55229 33 82 1.7E-15 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 P40_09025 743cd19d6734550561ba767fbddc3446 86 Gene3D G3DSA:3.30.1070.10 20 79 2.5E-27 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 P40_09025 743cd19d6734550561ba767fbddc3446 86 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 1.1E-28 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 P40_09025 743cd19d6734550561ba767fbddc3446 86 Pfam PF03776 Septum formation topological specificity factor MinE 14 81 3.9E-24 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 P40_00410 8b7b546e24c1935f78576301703da5d6 435 Gene3D G3DSA:1.10.287.130 171 287 5.9E-16 T 13-10-2018 P40_00410 8b7b546e24c1935f78576301703da5d6 435 SUPERFAMILY SSF47384 206 285 2.35E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_00410 8b7b546e24c1935f78576301703da5d6 435 Pfam PF08521 Two-component sensor kinase N-terminal 19 145 7.3E-9 T 13-10-2018 IPR013727 Two-component sensor kinase, N-terminal P40_00410 8b7b546e24c1935f78576301703da5d6 435 SMART SM00388 223 287 1.6E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_00410 8b7b546e24c1935f78576301703da5d6 435 SMART SM00387 327 433 3.3E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_00410 8b7b546e24c1935f78576301703da5d6 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 285 3.3E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_00410 8b7b546e24c1935f78576301703da5d6 435 SUPERFAMILY SSF55874 309 430 1.7E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_00410 8b7b546e24c1935f78576301703da5d6 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 430 1.3E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_00410 8b7b546e24c1935f78576301703da5d6 435 Gene3D G3DSA:3.30.565.10 297 434 2.5E-22 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_16250 6446398330bfe9a3c91f9e1838896276 310 Pfam PF03466 LysR substrate binding domain 88 294 1.4E-36 T 13-10-2018 IPR005119 LysR, substrate-binding P40_16250 6446398330bfe9a3c91f9e1838896276 310 SUPERFAMILY SSF46785 1 86 3.3E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_16250 6446398330bfe9a3c91f9e1838896276 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.5E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_16250 6446398330bfe9a3c91f9e1838896276 310 Gene3D G3DSA:1.10.10.10 1 88 1.4E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_16250 6446398330bfe9a3c91f9e1838896276 310 Gene3D G3DSA:3.40.190.290 91 294 1.2E-51 T 13-10-2018 P40_16250 6446398330bfe9a3c91f9e1838896276 310 SUPERFAMILY SSF53850 89 297 1.81E-40 T 13-10-2018 P40_18230 24bf3c2b6a371095c2f4ca731684012d 114 ProSitePatterns PS00464 Ribosomal protein L22 signature. 85 109 - T 13-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18230 24bf3c2b6a371095c2f4ca731684012d 114 Gene3D G3DSA:3.90.470.10 1 114 1.6E-47 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 P40_18230 24bf3c2b6a371095c2f4ca731684012d 114 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 3 112 28.789 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18230 24bf3c2b6a371095c2f4ca731684012d 114 SUPERFAMILY SSF54843 3 113 1.12E-44 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 P40_18230 24bf3c2b6a371095c2f4ca731684012d 114 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 7 109 4.3E-47 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18230 24bf3c2b6a371095c2f4ca731684012d 114 Pfam PF00237 Ribosomal protein L22p/L17e 7 109 2.6E-39 T 13-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 P40_04445 f591d5e4c9d6c7b57ad7558423671d04 224 SMART SM00965 61 112 2.1E-11 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 P40_04445 f591d5e4c9d6c7b57ad7558423671d04 224 Pfam PF07660 Secretin and TonB N terminus short domain 61 111 1.8E-9 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 P40_04445 f591d5e4c9d6c7b57ad7558423671d04 224 Gene3D G3DSA:3.55.50.30 40 121 1.7E-22 T 13-10-2018 P40_02780 e3d45c7d56aa718fd2736b5a5c84e762 334 SUPERFAMILY SSF102114 13 283 2.35E-69 T 13-10-2018 P40_02780 e3d45c7d56aa718fd2736b5a5c84e762 334 SMART SM00729 23 225 2.0E-4 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 P40_02780 e3d45c7d56aa718fd2736b5a5c84e762 334 Pfam PF06463 Molybdenum Cofactor Synthesis C 195 316 1.7E-33 T 13-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 P40_02780 e3d45c7d56aa718fd2736b5a5c84e762 334 Gene3D G3DSA:3.20.20.70 11 334 5.0E-86 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_02780 e3d45c7d56aa718fd2736b5a5c84e762 334 Pfam PF04055 Radical SAM superfamily 29 184 2.2E-30 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P40_02780 e3d45c7d56aa718fd2736b5a5c84e762 334 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 14 334 36.908 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 P40_02780 e3d45c7d56aa718fd2736b5a5c84e762 334 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 29 40 - T 13-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 P40_02780 e3d45c7d56aa718fd2736b5a5c84e762 334 Pfam PF13353 4Fe-4S single cluster domain 30 133 3.1E-11 T 13-10-2018 P40_02780 e3d45c7d56aa718fd2736b5a5c84e762 334 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 14 334 1.2E-103 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 P40_08850 65912360506c4f8abf28d2e911000d92 151 Gene3D G3DSA:2.60.120.1140 10 144 3.0E-37 T 13-10-2018 IPR038695 Saro_0823-like superfamily P40_08850 65912360506c4f8abf28d2e911000d92 151 Pfam PF02643 Uncharacterized ACR, COG1430 29 137 9.3E-32 T 13-10-2018 IPR003795 Protein of unknown function DUF192 P40_00340 bd71f64f56cb76b4b16e83bfec1d7d91 182 Gene3D G3DSA:2.30.30.40 38 162 1.6E-19 T 13-10-2018 P40_00340 bd71f64f56cb76b4b16e83bfec1d7d91 182 SMART SM00260 32 170 3.4E-14 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 P40_00340 bd71f64f56cb76b4b16e83bfec1d7d91 182 Gene3D G3DSA:2.40.50.180 55 121 1.6E-19 T 13-10-2018 P40_00340 bd71f64f56cb76b4b16e83bfec1d7d91 182 SUPERFAMILY SSF50341 34 175 7.06E-28 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 P40_00340 bd71f64f56cb76b4b16e83bfec1d7d91 182 Pfam PF01584 CheW-like domain 37 172 4.5E-24 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 P40_11255 415aee465b7b6995681c205c499432f2 156 SUPERFAMILY SSF54637 14 144 1.73E-26 T 13-10-2018 IPR029069 HotDog domain superfamily P40_11255 415aee465b7b6995681c205c499432f2 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 126 7.0E-14 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 P40_11255 415aee465b7b6995681c205c499432f2 156 Gene3D G3DSA:3.10.129.10 7 153 9.3E-47 T 13-10-2018 P40_11255 415aee465b7b6995681c205c499432f2 156 Pfam PF03061 Thioesterase superfamily 56 132 4.0E-13 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_18165 22ef1106eb2e60b007640ab0ef0a7f45 60 SUPERFAMILY SSF55129 3 58 2.09E-21 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily P40_18165 22ef1106eb2e60b007640ab0ef0a7f45 60 Gene3D G3DSA:3.30.1390.20 1 58 3.4E-27 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily P40_18165 22ef1106eb2e60b007640ab0ef0a7f45 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 58 3.9E-24 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18165 22ef1106eb2e60b007640ab0ef0a7f45 60 PIRSF PIRSF002211 1 60 4.3E-28 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18165 22ef1106eb2e60b007640ab0ef0a7f45 60 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 4.7E-21 T 13-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain P40_18165 22ef1106eb2e60b007640ab0ef0a7f45 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 21.344 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_02965 dc2f34fcd22bae8f89066dbcbff3c0ba 436 SUPERFAMILY SSF53633 3 288 3.91E-65 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily P40_02965 dc2f34fcd22bae8f89066dbcbff3c0ba 436 Gene3D G3DSA:3.40.1160.10 5 288 2.4E-85 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily P40_02965 dc2f34fcd22bae8f89066dbcbff3c0ba 436 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 436 204.88 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 P40_02965 dc2f34fcd22bae8f89066dbcbff3c0ba 436 SUPERFAMILY SSF55729 291 414 9.43E-21 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_02965 dc2f34fcd22bae8f89066dbcbff3c0ba 436 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 7 436 2.1E-175 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 P40_02965 dc2f34fcd22bae8f89066dbcbff3c0ba 436 Pfam PF00696 Amino acid kinase family 24 261 8.6E-23 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 P40_02965 dc2f34fcd22bae8f89066dbcbff3c0ba 436 Gene3D G3DSA:3.40.630.30 289 436 7.4E-40 T 13-10-2018 P40_02965 dc2f34fcd22bae8f89066dbcbff3c0ba 436 Pfam PF00583 Acetyltransferase (GNAT) family 325 397 1.1E-9 T 13-10-2018 IPR000182 GNAT domain P40_02965 dc2f34fcd22bae8f89066dbcbff3c0ba 436 PIRSF PIRSF000423 1 436 8.0E-186 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 P40_07070 b49b822649313a031a90923ba01df62f 317 Pfam PF01571 Aminomethyltransferase folate-binding domain 28 125 2.3E-7 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain P40_07070 b49b822649313a031a90923ba01df62f 317 Gene3D G3DSA:2.40.30.160 194 303 4.2E-26 T 13-10-2018 P40_07070 b49b822649313a031a90923ba01df62f 317 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 224 291 2.7E-5 T 13-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 P40_07070 b49b822649313a031a90923ba01df62f 317 SUPERFAMILY SSF103025 22 240 4.55E-48 T 13-10-2018 P40_07070 b49b822649313a031a90923ba01df62f 317 Gene3D G3DSA:3.30.70.1630 28 191 5.1E-26 T 13-10-2018 P40_07070 b49b822649313a031a90923ba01df62f 317 Gene3D G3DSA:3.30.70.1400 29 115 5.1E-26 T 13-10-2018 P40_07070 b49b822649313a031a90923ba01df62f 317 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 185 248 6.7E-23 T 13-10-2018 IPR017703 YgfZ/GcvT conserved site P40_12360 627099cfb218aa3f66d83fd7db35a6fd 292 Gene3D G3DSA:1.10.10.10 2 90 1.7E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_12360 627099cfb218aa3f66d83fd7db35a6fd 292 Pfam PF03466 LysR substrate binding domain 88 283 7.1E-47 T 13-10-2018 IPR005119 LysR, substrate-binding P40_12360 627099cfb218aa3f66d83fd7db35a6fd 292 Gene3D G3DSA:3.40.190.290 91 284 5.0E-60 T 13-10-2018 P40_12360 627099cfb218aa3f66d83fd7db35a6fd 292 SUPERFAMILY SSF53850 89 288 2.53E-46 T 13-10-2018 P40_12360 627099cfb218aa3f66d83fd7db35a6fd 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.0E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_12360 627099cfb218aa3f66d83fd7db35a6fd 292 SUPERFAMILY SSF46785 3 112 1.82E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_04870 df8dab50989569ff4b33ed220529e450 640 SUPERFAMILY SSF74863 36 156 6.28E-23 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily P40_04870 df8dab50989569ff4b33ed220529e450 640 Gene3D G3DSA:2.60.40.1250 33 171 5.0E-27 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily P40_04870 df8dab50989569ff4b33ed220529e450 640 Pfam PF13899 Thioredoxin-like 525 607 4.7E-13 T 13-10-2018 P40_04870 df8dab50989569ff4b33ed220529e450 640 Gene3D G3DSA:3.40.30.10 509 634 7.1E-28 T 13-10-2018 P40_04870 df8dab50989569ff4b33ed220529e450 640 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 217 413 2.5E-22 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 P40_04870 df8dab50989569ff4b33ed220529e450 640 SUPERFAMILY SSF52833 530 632 1.86E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_04870 df8dab50989569ff4b33ed220529e450 640 ProSitePatterns PS00194 Thioredoxin family active site. 542 560 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 P40_04870 df8dab50989569ff4b33ed220529e450 640 Pfam PF11412 Disulphide bond corrector protein DsbC 39 156 2.8E-21 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain P40_16245 92859e310c7ecad042a5615679fe33af 488 SUPERFAMILY SSF56801 6 486 5.36E-122 T 13-10-2018 P40_16245 92859e310c7ecad042a5615679fe33af 488 ProSitePatterns PS00455 Putative AMP-binding domain signature. 141 152 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_16245 92859e310c7ecad042a5615679fe33af 488 Pfam PF13193 AMP-binding enzyme C-terminal domain 400 475 6.2E-16 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_16245 92859e310c7ecad042a5615679fe33af 488 Pfam PF00501 AMP-binding enzyme 12 391 4.4E-70 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_16245 92859e310c7ecad042a5615679fe33af 488 Gene3D G3DSA:3.40.50.12780 3 383 2.3E-93 T 13-10-2018 P40_16245 92859e310c7ecad042a5615679fe33af 488 Gene3D G3DSA:3.30.300.310 387 488 8.5E-28 T 13-10-2018 P40_09145 d8612ae7c1d51ce0f76d2506a86f4e16 897 Pfam PF08335 GlnD PII-uridylyltransferase 181 321 3.8E-33 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 P40_09145 d8612ae7c1d51ce0f76d2506a86f4e16 897 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 40 884 9.1E-298 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 P40_09145 d8612ae7c1d51ce0f76d2506a86f4e16 897 SUPERFAMILY SSF55021 701 776 1.22E-5 T 13-10-2018 P40_09145 d8612ae7c1d51ce0f76d2506a86f4e16 897 Pfam PF01909 Nucleotidyltransferase domain 74 108 2.7E-6 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 P40_09145 d8612ae7c1d51ce0f76d2506a86f4e16 897 SUPERFAMILY SSF81301 11 172 1.74E-20 T 13-10-2018 P40_09145 d8612ae7c1d51ce0f76d2506a86f4e16 897 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 895 316.401 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 P40_09145 d8612ae7c1d51ce0f76d2506a86f4e16 897 SMART SM00471 454 601 1.5E-10 T 13-10-2018 IPR003607 HD/PDEase domain P40_09145 d8612ae7c1d51ce0f76d2506a86f4e16 897 Gene3D G3DSA:1.10.3210.10 447 586 3.5E-7 T 13-10-2018 P40_09145 d8612ae7c1d51ce0f76d2506a86f4e16 897 SUPERFAMILY SSF55021 811 882 7.5E-8 T 13-10-2018 P40_09145 d8612ae7c1d51ce0f76d2506a86f4e16 897 Pfam PF01966 HD domain 459 564 3.7E-12 T 13-10-2018 IPR006674 HD domain P40_09145 d8612ae7c1d51ce0f76d2506a86f4e16 897 SUPERFAMILY SSF81593 202 298 3.77E-8 T 13-10-2018 P40_09145 d8612ae7c1d51ce0f76d2506a86f4e16 897 SUPERFAMILY SSF109604 425 587 2.54E-15 T 13-10-2018 P40_09145 d8612ae7c1d51ce0f76d2506a86f4e16 897 PIRSF PIRSF006288 14 891 0.0 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 P40_16300 474c71744ca148ca9b9140f16f5423da 569 Pfam PF00364 Biotin-requiring enzyme 5 76 1.5E-18 T 13-10-2018 IPR000089 Biotin/lipoyl attachment P40_16300 474c71744ca148ca9b9140f16f5423da 569 Pfam PF00364 Biotin-requiring enzyme 132 203 1.3E-18 T 13-10-2018 IPR000089 Biotin/lipoyl attachment P40_16300 474c71744ca148ca9b9140f16f5423da 569 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 341 568 4.0E-82 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 P40_16300 474c71744ca148ca9b9140f16f5423da 569 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 154 183 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 P40_16300 474c71744ca148ca9b9140f16f5423da 569 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 5 569 4.9E-196 T 13-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 P40_16300 474c71744ca148ca9b9140f16f5423da 569 SUPERFAMILY SSF51230 131 216 1.14E-19 T 13-10-2018 IPR011053 Single hybrid motif P40_16300 474c71744ca148ca9b9140f16f5423da 569 SUPERFAMILY SSF51230 5 92 2.36E-20 T 13-10-2018 IPR011053 Single hybrid motif P40_16300 474c71744ca148ca9b9140f16f5423da 569 SUPERFAMILY SSF52777 333 569 8.45E-86 T 13-10-2018 P40_16300 474c71744ca148ca9b9140f16f5423da 569 SUPERFAMILY SSF47005 269 312 7.59E-12 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 P40_16300 474c71744ca148ca9b9140f16f5423da 569 Gene3D G3DSA:4.10.320.10 261 314 3.1E-19 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 P40_16300 474c71744ca148ca9b9140f16f5423da 569 Gene3D G3DSA:3.30.559.10 325 569 2.1E-95 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 P40_16300 474c71744ca148ca9b9140f16f5423da 569 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 P40_16300 474c71744ca148ca9b9140f16f5423da 569 Gene3D G3DSA:2.40.50.100 130 208 7.5E-20 T 13-10-2018 P40_16300 474c71744ca148ca9b9140f16f5423da 569 Gene3D G3DSA:2.40.50.100 3 82 2.4E-20 T 13-10-2018 P40_16300 474c71744ca148ca9b9140f16f5423da 569 Pfam PF02817 e3 binding domain 273 307 6.5E-14 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 P40_10635 c1c85e889826ebb24dd7dbff1dc2d917 163 Pfam PF00072 Response regulator receiver domain 7 118 5.3E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_10635 c1c85e889826ebb24dd7dbff1dc2d917 163 Gene3D G3DSA:3.40.50.12740 3 160 3.2E-39 T 13-10-2018 P40_10635 c1c85e889826ebb24dd7dbff1dc2d917 163 SUPERFAMILY SSF52172 5 143 1.71E-35 T 13-10-2018 IPR011006 CheY-like superfamily P40_10635 c1c85e889826ebb24dd7dbff1dc2d917 163 SMART SM00448 4 118 2.3E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_00435 2cafbdba75d57f3bcf24129f97284c96 284 SUPERFAMILY SSF51182 6 280 6.99E-84 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_00435 2cafbdba75d57f3bcf24129f97284c96 284 Pfam PF02678 Pirin 21 121 5.3E-37 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 P40_00435 2cafbdba75d57f3bcf24129f97284c96 284 Gene3D G3DSA:2.60.120.10 17 277 2.1E-97 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_00435 2cafbdba75d57f3bcf24129f97284c96 284 Gene3D G3DSA:2.60.120.10 143 250 2.1E-97 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_00435 2cafbdba75d57f3bcf24129f97284c96 284 Pfam PF05726 Pirin C-terminal cupin domain 180 280 2.1E-34 T 13-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 P40_00435 2cafbdba75d57f3bcf24129f97284c96 284 PIRSF PIRSF006232 2 284 2.1E-97 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 P40_04860 d185a1f3a2ab6291fd3d4f5f624f4782 150 Gene3D G3DSA:2.40.50.100 73 149 1.1E-30 T 13-10-2018 P40_04860 d185a1f3a2ab6291fd3d4f5f624f4782 150 SUPERFAMILY SSF51230 75 149 1.7E-24 T 13-10-2018 IPR011053 Single hybrid motif P40_04860 d185a1f3a2ab6291fd3d4f5f624f4782 150 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 149 4.9E-57 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 P40_04860 d185a1f3a2ab6291fd3d4f5f624f4782 150 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 106 123 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_04860 d185a1f3a2ab6291fd3d4f5f624f4782 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 79 92 2.0E-17 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 P40_04860 d185a1f3a2ab6291fd3d4f5f624f4782 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 96 110 2.0E-17 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 P40_04860 d185a1f3a2ab6291fd3d4f5f624f4782 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 111 124 2.0E-17 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 P40_04860 d185a1f3a2ab6291fd3d4f5f624f4782 150 Pfam PF00364 Biotin-requiring enzyme 77 149 1.4E-24 T 13-10-2018 IPR000089 Biotin/lipoyl attachment P40_21495 2cec01bca7203a76170cf71128a6554a 267 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_21495 2cec01bca7203a76170cf71128a6554a 267 SMART SM00382 37 237 1.2E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_21495 2cec01bca7203a76170cf71128a6554a 267 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 239 259 1.8E-10 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal P40_21495 2cec01bca7203a76170cf71128a6554a 267 Pfam PF00005 ABC transporter 28 188 2.2E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_21495 2cec01bca7203a76170cf71128a6554a 267 SUPERFAMILY SSF52540 11 259 5.33E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_21495 2cec01bca7203a76170cf71128a6554a 267 Gene3D G3DSA:3.40.50.300 10 261 1.2E-58 T 13-10-2018 P40_02445 38f14f4d49d9b550b5bfc0c465282e6a 303 PIRSF PIRSF035875 2 298 8.1E-63 T 13-10-2018 IPR017039 Virulence factor BrkB P40_02445 38f14f4d49d9b550b5bfc0c465282e6a 303 Pfam PF03631 Virulence factor BrkB 26 282 5.6E-53 T 13-10-2018 IPR017039 Virulence factor BrkB P40_02445 38f14f4d49d9b550b5bfc0c465282e6a 303 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 29 276 5.5E-26 T 13-10-2018 IPR017039 Virulence factor BrkB P40_08545 6c9b6bef64866b9741bb40e0b10d8d87 271 SUPERFAMILY SSF52096 3 267 3.11E-74 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_08545 6c9b6bef64866b9741bb40e0b10d8d87 271 Gene3D G3DSA:1.10.12.10 212 270 8.7E-24 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_08545 6c9b6bef64866b9741bb40e0b10d8d87 271 Gene3D G3DSA:3.90.226.10 6 211 2.4E-66 T 13-10-2018 P40_08545 6c9b6bef64866b9741bb40e0b10d8d87 271 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 267 5.5E-49 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_19660 f9061e045f7a07bf5b65a7cbb8f2295c 307 SUPERFAMILY SSF51735 13 256 1.31E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_19660 f9061e045f7a07bf5b65a7cbb8f2295c 307 Pfam PF00106 short chain dehydrogenase 15 217 2.3E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19660 f9061e045f7a07bf5b65a7cbb8f2295c 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.7E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19660 f9061e045f7a07bf5b65a7cbb8f2295c 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.7E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19660 f9061e045f7a07bf5b65a7cbb8f2295c 307 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 2.7E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19660 f9061e045f7a07bf5b65a7cbb8f2295c 307 Gene3D G3DSA:3.40.50.720 1 307 3.5E-82 T 13-10-2018 P40_14355 68a8734393b458b37837fb704ba86db2 62 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 55 1.1E-29 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 P40_14355 68a8734393b458b37837fb704ba86db2 62 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-11 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 P40_14355 68a8734393b458b37837fb704ba86db2 62 SUPERFAMILY SSF117130 1 54 9.02E-21 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 P40_14355 68a8734393b458b37837fb704ba86db2 62 Gene3D G3DSA:3.30.70.1680 1 59 7.1E-30 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 P40_14355 68a8734393b458b37837fb704ba86db2 62 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 62 17.134 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 P40_14355 68a8734393b458b37837fb704ba86db2 62 Pfam PF02599 Global regulator protein family 1 52 1.0E-26 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 P40_02305 020fbf979e012a9b8000049a9cf5df4d 240 Pfam PF04172 LrgB-like family 20 233 4.2E-72 T 13-10-2018 IPR007300 CidB/LrgB family P40_01850 4dfa0f1044415ee69aebbacc4c5ae6df 320 Gene3D G3DSA:3.40.190.10 127 245 1.7E-82 T 13-10-2018 P40_01850 4dfa0f1044415ee69aebbacc4c5ae6df 320 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 50 314 2.3E-59 T 13-10-2018 IPR005064 Bordetella uptake gene GO:0030288 P40_01850 4dfa0f1044415ee69aebbacc4c5ae6df 320 Gene3D G3DSA:3.40.190.150 31 304 1.7E-82 T 13-10-2018 P40_01850 4dfa0f1044415ee69aebbacc4c5ae6df 320 SUPERFAMILY SSF53850 107 284 1.21E-10 T 13-10-2018 P40_01850 4dfa0f1044415ee69aebbacc4c5ae6df 320 PIRSF PIRSF017082 1 319 1.3E-78 T 13-10-2018 IPR005064 Bordetella uptake gene GO:0030288 P40_11115 fd9d70891ed2a6fda8c7330cdc1f1c60 238 Pfam PF04452 RNA methyltransferase 18 234 1.0E-41 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 P40_11115 fd9d70891ed2a6fda8c7330cdc1f1c60 238 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 228 4.7E-25 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 P40_11115 fd9d70891ed2a6fda8c7330cdc1f1c60 238 PIRSF PIRSF015601 1 237 4.8E-41 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 P40_11115 fd9d70891ed2a6fda8c7330cdc1f1c60 238 SUPERFAMILY SSF75217 71 235 7.41E-32 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases P40_11115 fd9d70891ed2a6fda8c7330cdc1f1c60 238 Gene3D G3DSA:3.40.1280.10 4 237 2.8E-32 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal P40_08245 e0b05aafc3f54402bd02fe3dcdc05d91 127 PIRSF PIRSF018634 2 125 8.3E-40 T 13-10-2018 IPR009387 Toxin HigB-2 P40_08245 e0b05aafc3f54402bd02fe3dcdc05d91 127 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 2 121 1.9E-44 T 13-10-2018 IPR009387 Toxin HigB-2 P40_03765 5834fa2eb4742301b093af5f5a67b39b 362 Pfam PF03929 PepSY-associated TM region 6 355 3.5E-69 T 13-10-2018 IPR005625 PepSY-associated TM protein P40_03765 5834fa2eb4742301b093af5f5a67b39b 362 Pfam PF03413 Peptidase propeptide and YPEB domain 238 302 4.5E-4 T 13-10-2018 IPR025711 PepSY domain P40_18720 923b15efc491c26860116275f1bdcad5 103 SMART SM01103 3 86 3.3E-35 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 P40_18720 923b15efc491c26860116275f1bdcad5 103 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.1E-20 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 P40_18720 923b15efc491c26860116275f1bdcad5 103 SUPERFAMILY SSF75471 1 96 1.44E-26 T 13-10-2018 IPR035920 YhbY-like superfamily P40_18720 923b15efc491c26860116275f1bdcad5 103 Gene3D G3DSA:3.30.110.60 1 101 1.3E-28 T 13-10-2018 IPR035920 YhbY-like superfamily P40_18720 923b15efc491c26860116275f1bdcad5 103 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 12 88 1.0E-17 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 P40_19285 404fb5fb83296db09961b64fc0d6fae8 152 Gene3D G3DSA:3.10.129.10 4 151 5.6E-42 T 13-10-2018 P40_19285 404fb5fb83296db09961b64fc0d6fae8 152 SUPERFAMILY SSF54637 10 148 3.56E-32 T 13-10-2018 IPR029069 HotDog domain superfamily P40_19285 404fb5fb83296db09961b64fc0d6fae8 152 Pfam PF14539 Domain of unknown function (DUF4442) 9 141 3.2E-21 T 13-10-2018 IPR027961 Protein of unknown function DUF4442 P40_03700 dbc3e4a4a3b31812015b42088df79d2e 585 SUPERFAMILY SSF56300 144 554 7.9E-32 T 13-10-2018 P40_03700 dbc3e4a4a3b31812015b42088df79d2e 585 Gene3D G3DSA:2.60.40.380 42 142 3.2E-35 T 13-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 P40_03700 dbc3e4a4a3b31812015b42088df79d2e 585 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 50 140 4.2E-32 T 13-10-2018 IPR032093 Phospholipase D, N-terminal P40_03700 dbc3e4a4a3b31812015b42088df79d2e 585 Pfam PF09423 PhoD-like phosphatase 151 551 3.5E-127 T 13-10-2018 IPR018946 Alkaline phosphatase D-related P40_21050 19e87ffa87d9555f45095025724de252 158 Pfam PF08534 Redoxin 5 154 7.4E-36 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 P40_21050 19e87ffa87d9555f45095025724de252 158 Gene3D G3DSA:3.40.30.10 1 158 9.7E-58 T 13-10-2018 P40_21050 19e87ffa87d9555f45095025724de252 158 SUPERFAMILY SSF52833 1 146 1.26E-32 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_04040 26e0f528a09ae8e415785e40faadb4e0 231 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 217 25.052 T 13-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 P40_04040 26e0f528a09ae8e415785e40faadb4e0 231 Pfam PF02525 Flavodoxin-like fold 3 215 2.6E-36 T 13-10-2018 IPR003680 Flavodoxin-like fold P40_04040 26e0f528a09ae8e415785e40faadb4e0 231 Gene3D G3DSA:3.40.50.360 1 218 8.6E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_04040 26e0f528a09ae8e415785e40faadb4e0 231 SUPERFAMILY SSF52218 1 220 1.69E-41 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_02495 4eb546b697fb37668e20914ffec359d6 380 Pfam PF06433 Methylamine dehydrogenase heavy chain (MADH) 44 378 1.6E-48 T 13-10-2018 IPR009451 Amine dehydrogenase heavy chain GO:0030058|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 P40_02495 4eb546b697fb37668e20914ffec359d6 380 Gene3D G3DSA:2.130.10.10 21 380 9.7E-122 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_02495 4eb546b697fb37668e20914ffec359d6 380 SUPERFAMILY SSF50969 20 377 5.3E-83 T 13-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like P40_11120 d31c8114b2bf71fcd45b0132578c2da1 280 Gene3D G3DSA:3.10.290.10 1 59 2.3E-22 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 P40_11120 d31c8114b2bf71fcd45b0132578c2da1 280 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 P40_11120 d31c8114b2bf71fcd45b0132578c2da1 280 SUPERFAMILY SSF55174 5 95 4.56E-18 T 13-10-2018 P40_11120 d31c8114b2bf71fcd45b0132578c2da1 280 SUPERFAMILY SSF55120 66 237 5.04E-41 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_11120 d31c8114b2bf71fcd45b0132578c2da1 280 Gene3D G3DSA:3.30.70.1560 129 221 1.4E-48 T 13-10-2018 P40_11120 d31c8114b2bf71fcd45b0132578c2da1 280 Gene3D G3DSA:3.30.70.580 68 229 1.4E-48 T 13-10-2018 P40_11120 d31c8114b2bf71fcd45b0132578c2da1 280 Pfam PF01479 S4 domain 4 48 7.0E-14 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_11120 d31c8114b2bf71fcd45b0132578c2da1 280 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 234 2.3E-50 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 P40_11120 d31c8114b2bf71fcd45b0132578c2da1 280 Pfam PF00849 RNA pseudouridylate synthase 67 201 2.2E-14 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_11120 d31c8114b2bf71fcd45b0132578c2da1 280 SMART SM00363 3 59 2.5E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_01295 8aa08570bcda6c03b9584e0628f8a9d4 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 1.4E-13 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_01295 8aa08570bcda6c03b9584e0628f8a9d4 208 SUPERFAMILY SSF48498 97 207 1.09E-5 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_01295 8aa08570bcda6c03b9584e0628f8a9d4 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 5.0E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_01295 8aa08570bcda6c03b9584e0628f8a9d4 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 5.0E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_01295 8aa08570bcda6c03b9584e0628f8a9d4 208 SUPERFAMILY SSF46689 13 95 1.39E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_01295 8aa08570bcda6c03b9584e0628f8a9d4 208 Gene3D G3DSA:1.10.357.10 66 207 9.7E-10 T 13-10-2018 P40_01295 8aa08570bcda6c03b9584e0628f8a9d4 208 Gene3D G3DSA:1.10.10.60 5 65 1.6E-16 T 13-10-2018 P40_01295 8aa08570bcda6c03b9584e0628f8a9d4 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 66 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site P40_01680 6d6964e2a0a3a50c94a6c8d71a68e5ca 252 SUPERFAMILY SSF55781 79 250 4.38E-35 T 13-10-2018 P40_01680 6d6964e2a0a3a50c94a6c8d71a68e5ca 252 Pfam PF01614 Bacterial transcriptional regulator 124 248 1.4E-18 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal P40_01680 6d6964e2a0a3a50c94a6c8d71a68e5ca 252 Pfam PF09339 IclR helix-turn-helix domain 8 54 6.0E-12 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 P40_01680 6d6964e2a0a3a50c94a6c8d71a68e5ca 252 SMART SM00346 6 95 3.3E-18 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 P40_01680 6d6964e2a0a3a50c94a6c8d71a68e5ca 252 Gene3D G3DSA:3.30.450.40 80 249 3.2E-41 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_01680 6d6964e2a0a3a50c94a6c8d71a68e5ca 252 SUPERFAMILY SSF46785 6 76 3.96E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_01680 6d6964e2a0a3a50c94a6c8d71a68e5ca 252 Gene3D G3DSA:1.10.10.10 3 76 5.2E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_04005 cd76834121e4380e52db4420aa106ae2 433 SUPERFAMILY SSF56801 26 405 1.7E-67 T 13-10-2018 P40_04005 cd76834121e4380e52db4420aa106ae2 433 Pfam PF00501 AMP-binding enzyme 97 293 3.9E-18 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_04005 cd76834121e4380e52db4420aa106ae2 433 Gene3D G3DSA:3.30.300.30 333 432 4.5E-30 T 13-10-2018 P40_04005 cd76834121e4380e52db4420aa106ae2 433 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 15 431 1.4E-222 T 13-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 P40_04005 cd76834121e4380e52db4420aa106ae2 433 Gene3D G3DSA:3.40.50.12780 1 332 2.9E-140 T 13-10-2018 P40_04005 cd76834121e4380e52db4420aa106ae2 433 PIRSF PIRSF006444 5 433 2.0E-208 T 13-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 P40_04005 cd76834121e4380e52db4420aa106ae2 433 Pfam PF14535 AMP-binding enzyme C-terminal domain 339 431 4.8E-26 T 13-10-2018 IPR028154 AMP-dependent ligase, C-terminal P40_15065 e1a453cdf3dc4d47f3eef24047264854 213 SUPERFAMILY SSF102114 25 102 6.41E-13 T 13-10-2018 P40_15065 e1a453cdf3dc4d47f3eef24047264854 213 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 210 35.753 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 P40_15065 e1a453cdf3dc4d47f3eef24047264854 213 PIRSF PIRSF000370 1 213 5.6E-68 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 P40_15065 e1a453cdf3dc4d47f3eef24047264854 213 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 3 213 1.5E-107 T 13-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE P40_15065 e1a453cdf3dc4d47f3eef24047264854 213 Pfam PF13394 4Fe-4S single cluster domain 24 106 9.2E-12 T 13-10-2018 P40_15065 e1a453cdf3dc4d47f3eef24047264854 213 Pfam PF04055 Radical SAM superfamily 26 109 1.2E-12 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P40_15065 e1a453cdf3dc4d47f3eef24047264854 213 Gene3D G3DSA:3.20.20.70 3 207 5.1E-34 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_08075 025cba46ac9c9f9f628aa418c076d67f 128 Pfam PF01850 PIN domain 5 119 4.7E-13 T 13-10-2018 IPR002716 PIN domain P40_08075 025cba46ac9c9f9f628aa418c076d67f 128 SUPERFAMILY SSF88723 1 124 3.36E-20 T 13-10-2018 IPR029060 PIN-like domain superfamily P40_08075 025cba46ac9c9f9f628aa418c076d67f 128 Gene3D G3DSA:3.40.50.1010 1 125 2.6E-11 T 13-10-2018 P40_03980 ff7f09ac8002ca6cab4aefff769d91f8 386 Gene3D G3DSA:3.40.50.2300 150 380 2.5E-104 T 13-10-2018 P40_03980 ff7f09ac8002ca6cab4aefff769d91f8 386 SUPERFAMILY SSF53822 30 385 1.22E-85 T 13-10-2018 IPR028082 Periplasmic binding protein-like I P40_03980 ff7f09ac8002ca6cab4aefff769d91f8 386 Gene3D G3DSA:3.40.50.2300 33 370 2.5E-104 T 13-10-2018 P40_03980 ff7f09ac8002ca6cab4aefff769d91f8 386 Pfam PF13458 Periplasmic binding protein 31 380 2.1E-65 T 13-10-2018 IPR028081 Leucine-binding protein domain P40_03980 ff7f09ac8002ca6cab4aefff769d91f8 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 54 70 3.6E-5 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_03980 ff7f09ac8002ca6cab4aefff769d91f8 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 32 48 3.6E-5 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_03980 ff7f09ac8002ca6cab4aefff769d91f8 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 73 91 3.6E-5 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_03980 ff7f09ac8002ca6cab4aefff769d91f8 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 260 278 3.6E-5 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_16485 9c631a7f1c848c6fc4153464dba21290 311 SUPERFAMILY SSF81799 116 215 1.83E-33 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 P40_16485 9c631a7f1c848c6fc4153464dba21290 311 PIRSF PIRSF004486 3 311 2.3E-98 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 P40_16485 9c631a7f1c848c6fc4153464dba21290 311 Pfam PF01795 MraW methylase family 7 309 4.3E-100 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 P40_16485 9c631a7f1c848c6fc4153464dba21290 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 9 310 37.351 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 P40_16485 9c631a7f1c848c6fc4153464dba21290 311 SUPERFAMILY SSF53335 9 310 8.88E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_16485 9c631a7f1c848c6fc4153464dba21290 311 Gene3D G3DSA:3.40.50.150 12 309 1.0E-98 T 13-10-2018 P40_16485 9c631a7f1c848c6fc4153464dba21290 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 309 7.7E-100 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 P40_16485 9c631a7f1c848c6fc4153464dba21290 311 Gene3D G3DSA:1.10.150.170 114 216 1.0E-98 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 P40_14550 1adc0469b937aa0961fb772d7fb5bdc4 465 SUPERFAMILY SSF46785 1 81 3.47E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_14550 1adc0469b937aa0961fb772d7fb5bdc4 465 SUPERFAMILY SSF53383 89 465 1.33E-93 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_14550 1adc0469b937aa0961fb772d7fb5bdc4 465 SMART SM00345 7 66 4.5E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_14550 1adc0469b937aa0961fb772d7fb5bdc4 465 Gene3D G3DSA:1.10.10.10 1 68 1.3E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14550 1adc0469b937aa0961fb772d7fb5bdc4 465 Pfam PF00155 Aminotransferase class I and II 120 460 1.8E-27 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_14550 1adc0469b937aa0961fb772d7fb5bdc4 465 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 6.6E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_14550 1adc0469b937aa0961fb772d7fb5bdc4 465 Gene3D G3DSA:3.40.640.10 141 359 3.6E-103 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_14550 1adc0469b937aa0961fb772d7fb5bdc4 465 Gene3D G3DSA:3.90.1150.10 96 464 3.6E-103 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 Pfam PF00106 short chain dehydrogenase 318 507 1.6E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 454 482 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 Gene3D G3DSA:3.40.50.720 315 568 3.3E-72 T 13-10-2018 P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 393 404 8.3E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 447 455 8.3E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 467 486 8.3E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 Pfam PF00561 alpha/beta hydrolase fold 35 142 3.4E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 SUPERFAMILY SSF51735 316 578 6.06E-67 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 441 457 2.2E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 467 486 2.2E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 393 404 2.2E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 319 336 2.2E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 488 505 2.2E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 Gene3D G3DSA:3.40.50.1820 8 294 2.7E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 SUPERFAMILY SSF53474 8 292 4.41E-42 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_21385 070fe67998dcb2e8d29c76c9b8d96d45 584 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 318 502 0.0044 T 13-10-2018 P40_01995 56dc9975ef7ab88be9608ce357cc6e77 375 Gene3D G3DSA:3.90.180.10 19 369 3.2E-122 T 13-10-2018 P40_01995 56dc9975ef7ab88be9608ce357cc6e77 375 Pfam PF00107 Zinc-binding dehydrogenase 204 321 1.2E-25 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 P40_01995 56dc9975ef7ab88be9608ce357cc6e77 375 SUPERFAMILY SSF50129 4 200 8.37E-61 T 13-10-2018 IPR011032 GroES-like superfamily P40_01995 56dc9975ef7ab88be9608ce357cc6e77 375 Gene3D G3DSA:3.40.50.720 181 317 3.2E-122 T 13-10-2018 P40_01995 56dc9975ef7ab88be9608ce357cc6e77 375 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 68 82 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 P40_01995 56dc9975ef7ab88be9608ce357cc6e77 375 SUPERFAMILY SSF51735 166 339 3.95E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_01995 56dc9975ef7ab88be9608ce357cc6e77 375 SUPERFAMILY SSF50129 327 374 7.06E-10 T 13-10-2018 IPR011032 GroES-like superfamily P40_01995 56dc9975ef7ab88be9608ce357cc6e77 375 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 36 162 2.8E-28 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P40_01995 56dc9975ef7ab88be9608ce357cc6e77 375 SMART SM00829 18 373 1.1E-7 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P40_06345 5c3f3c1437b6194b3ce9f136cb2ef08e 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 37 68 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site P40_06345 5c3f3c1437b6194b3ce9f136cb2ef08e 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 2.6E-17 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_06345 5c3f3c1437b6194b3ce9f136cb2ef08e 203 SUPERFAMILY SSF46689 13 89 7.48E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06345 5c3f3c1437b6194b3ce9f136cb2ef08e 203 Gene3D G3DSA:1.10.357.10 9 200 2.0E-31 T 13-10-2018 P40_06345 5c3f3c1437b6194b3ce9f136cb2ef08e 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 2.9E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_06345 5c3f3c1437b6194b3ce9f136cb2ef08e 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 2.9E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_08040 33a0c07177e02983f53f3c9c463d7372 377 Gene3D G3DSA:3.10.560.10 68 255 1.0E-110 T 13-10-2018 P40_08040 33a0c07177e02983f53f3c9c463d7372 377 Gene3D G3DSA:3.10.560.10 57 342 1.0E-110 T 13-10-2018 P40_08040 33a0c07177e02983f53f3c9c463d7372 377 Pfam PF10531 SLBB domain 257 306 1.9E-5 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_08040 33a0c07177e02983f53f3c9c463d7372 377 Pfam PF10531 SLBB domain 174 221 8.3E-13 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_08040 33a0c07177e02983f53f3c9c463d7372 377 Gene3D G3DSA:3.30.1950.10 89 170 1.0E-110 T 13-10-2018 P40_08040 33a0c07177e02983f53f3c9c463d7372 377 Pfam PF02563 Polysaccharide biosynthesis/export protein 81 166 2.8E-26 T 13-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 P40_12630 9ab5b1230e13dc35808d44535a74c543 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 372 3.7E-23 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_12630 9ab5b1230e13dc35808d44535a74c543 387 Gene3D G3DSA:2.40.110.10 117 222 4.3E-18 T 13-10-2018 P40_12630 9ab5b1230e13dc35808d44535a74c543 387 Gene3D G3DSA:1.10.540.10 1 116 2.4E-24 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_12630 9ab5b1230e13dc35808d44535a74c543 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 119 210 8.5E-14 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_12630 9ab5b1230e13dc35808d44535a74c543 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 115 1.7E-15 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_12630 9ab5b1230e13dc35808d44535a74c543 387 SUPERFAMILY SSF56645 1 222 3.53E-44 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_12630 9ab5b1230e13dc35808d44535a74c543 387 SUPERFAMILY SSF47203 232 372 4.83E-33 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_12630 9ab5b1230e13dc35808d44535a74c543 387 Gene3D G3DSA:1.20.140.10 230 378 7.5E-30 T 13-10-2018 P40_15245 a8be1fa63d6e23cf3a8d6d8205e5bad2 357 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 57 326 4.0E-59 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 P40_15245 a8be1fa63d6e23cf3a8d6d8205e5bad2 357 SUPERFAMILY SSF53187 31 327 2.38E-74 T 13-10-2018 P40_15245 a8be1fa63d6e23cf3a8d6d8205e5bad2 357 Gene3D G3DSA:3.40.630.10 25 328 2.0E-94 T 13-10-2018 P40_15245 a8be1fa63d6e23cf3a8d6d8205e5bad2 357 PIRSF PIRSF039012 11 332 3.9E-90 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 P40_02860 875d9218609bddbec6d21d8d011f11ec 618 PIRSF PIRSF004950 1 616 2.6E-145 T 13-10-2018 IPR012159 Inner membrane protein YejM P40_02860 875d9218609bddbec6d21d8d011f11ec 618 Pfam PF11893 Domain of unknown function (DUF3413) 16 241 3.5E-23 T 13-10-2018 IPR024588 Inner membrane protein YejM, N-terminal P40_02860 875d9218609bddbec6d21d8d011f11ec 618 SUPERFAMILY SSF53649 247 567 8.11E-65 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 P40_02860 875d9218609bddbec6d21d8d011f11ec 618 Gene3D G3DSA:3.40.720.10 238 534 3.5E-62 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 P40_02860 875d9218609bddbec6d21d8d011f11ec 618 Pfam PF00884 Sulfatase 249 528 4.1E-38 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 P40_11240 0145010080e161b6971967435cd51c66 420 SUPERFAMILY SSF103473 17 409 8.89E-55 T 13-10-2018 IPR036259 MFS transporter superfamily P40_11240 0145010080e161b6971967435cd51c66 420 Pfam PF07690 Major Facilitator Superfamily 19 362 3.4E-43 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_11240 0145010080e161b6971967435cd51c66 420 PRINTS PR01035 Tetracycline resistance protein signature 321 341 4.1E-15 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 P40_11240 0145010080e161b6971967435cd51c66 420 PRINTS PR01035 Tetracycline resistance protein signature 179 199 4.1E-15 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 P40_11240 0145010080e161b6971967435cd51c66 420 PRINTS PR01035 Tetracycline resistance protein signature 356 379 4.1E-15 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 P40_11240 0145010080e161b6971967435cd51c66 420 PRINTS PR01035 Tetracycline resistance protein signature 24 40 4.1E-15 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 P40_11240 0145010080e161b6971967435cd51c66 420 PRINTS PR01035 Tetracycline resistance protein signature 151 173 4.1E-15 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 P40_11240 0145010080e161b6971967435cd51c66 420 Gene3D G3DSA:1.20.1250.20 14 409 5.1E-56 T 13-10-2018 P40_10505 43e2435a2669d03a82723e89c6c89362 1247 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 26 1205 4.5E-203 T 13-10-2018 IPR017731 Type VI secretion system, IcmF P40_10505 43e2435a2669d03a82723e89c6c89362 1247 Pfam PF06761 Intracellular multiplication and human macrophage-killing 497 834 6.3E-81 T 13-10-2018 IPR009612 ImcF-related P40_10505 43e2435a2669d03a82723e89c6c89362 1247 SUPERFAMILY SSF52540 126 270 4.78E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10505 43e2435a2669d03a82723e89c6c89362 1247 Pfam PF14331 ImcF-related N-terminal domain 192 447 1.6E-80 T 13-10-2018 IPR025743 ImcF-related, N-terminal domain P40_10505 43e2435a2669d03a82723e89c6c89362 1247 Pfam PF06744 Type VI secretion protein IcmF C-terminal 982 1177 1.3E-44 T 13-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal P40_12550 0f4778d50eda7a5f2b08d1157fac2a72 227 Gene3D G3DSA:3.30.70.1290 1 136 2.3E-15 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 P40_12550 0f4778d50eda7a5f2b08d1157fac2a72 227 Pfam PF01797 Transposase IS200 like 13 107 9.0E-6 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 P40_12550 0f4778d50eda7a5f2b08d1157fac2a72 227 SMART SM01321 3 109 1.6E-8 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 P40_12550 0f4778d50eda7a5f2b08d1157fac2a72 227 SUPERFAMILY SSF143422 25 108 5.36E-11 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 P40_18445 cf5bf8d8072f92763a7997d15c21c62c 264 SUPERFAMILY SSF53613 2 258 4.09E-63 T 13-10-2018 IPR029056 Ribokinase-like P40_18445 cf5bf8d8072f92763a7997d15c21c62c 264 Pfam PF08543 Phosphomethylpyrimidine kinase 12 256 1.0E-64 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 P40_18445 cf5bf8d8072f92763a7997d15c21c62c 264 Gene3D G3DSA:3.40.1190.20 1 262 1.2E-73 T 13-10-2018 IPR029056 Ribokinase-like P40_02985 85a646eed4968145858856a143eba92a 955 Gene3D G3DSA:3.30.460.100 46 286 1.3E-73 T 13-10-2018 P40_02985 85a646eed4968145858856a143eba92a 955 Gene3D G3DSA:3.30.460.100 569 819 3.3E-90 T 13-10-2018 P40_02985 85a646eed4968145858856a143eba92a 955 Gene3D G3DSA:1.20.120.1510 456 568 1.7E-28 T 13-10-2018 P40_02985 85a646eed4968145858856a143eba92a 955 SUPERFAMILY SSF81301 32 293 4.77E-79 T 13-10-2018 P40_02985 85a646eed4968145858856a143eba92a 955 SUPERFAMILY SSF81301 534 823 1.16E-83 T 13-10-2018 P40_02985 85a646eed4968145858856a143eba92a 955 Gene3D G3DSA:1.20.120.330 820 954 8.4E-45 T 13-10-2018 P40_02985 85a646eed4968145858856a143eba92a 955 SUPERFAMILY SSF81593 294 443 1.26E-45 T 13-10-2018 P40_02985 85a646eed4968145858856a143eba92a 955 Pfam PF08335 GlnD PII-uridylyltransferase 838 925 4.8E-8 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 P40_02985 85a646eed4968145858856a143eba92a 955 Pfam PF08335 GlnD PII-uridylyltransferase 304 443 7.9E-46 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 P40_02985 85a646eed4968145858856a143eba92a 955 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 560 813 4.3E-88 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 P40_02985 85a646eed4968145858856a143eba92a 955 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 38 282 8.8E-76 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 P40_02985 85a646eed4968145858856a143eba92a 955 SUPERFAMILY SSF81593 823 951 4.63E-31 T 13-10-2018 P40_02985 85a646eed4968145858856a143eba92a 955 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 34 953 19.235 T 13-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 P40_02985 85a646eed4968145858856a143eba92a 955 Gene3D G3DSA:1.20.120.330 292 447 3.8E-55 T 13-10-2018 P40_10425 c6040dc0e7ac6520cdc67e83d7b23a8f 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 5 51 1.8E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_10425 c6040dc0e7ac6520cdc67e83d7b23a8f 184 Gene3D G3DSA:1.10.357.10 48 183 2.6E-20 T 13-10-2018 P40_10425 c6040dc0e7ac6520cdc67e83d7b23a8f 184 SUPERFAMILY SSF48498 70 158 5.56E-11 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_10425 c6040dc0e7ac6520cdc67e83d7b23a8f 184 SUPERFAMILY SSF46689 2 64 5.99E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_10425 c6040dc0e7ac6520cdc67e83d7b23a8f 184 Gene3D G3DSA:1.10.10.60 1 47 4.3E-15 T 13-10-2018 P40_10425 c6040dc0e7ac6520cdc67e83d7b23a8f 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 5 18 1.5E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_10425 c6040dc0e7ac6520cdc67e83d7b23a8f 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 49 1.5E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_10425 c6040dc0e7ac6520cdc67e83d7b23a8f 184 ProSitePatterns PS01081 TetR-type HTH domain signature. 17 47 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site P40_13700 c20d282c14885da3b10e92b25802da39 348 SMART SM00729 55 280 1.1E-6 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 P40_13700 c20d282c14885da3b10e92b25802da39 348 Pfam PF04055 Radical SAM superfamily 59 237 1.2E-9 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P40_13700 c20d282c14885da3b10e92b25802da39 348 SUPERFAMILY SSF102114 40 287 3.01E-11 T 13-10-2018 P40_07280 24c6cd1549e282948e0b57e213bb9c24 432 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 430 4.5E-155 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 P40_07280 24c6cd1549e282948e0b57e213bb9c24 432 PIRSF PIRSF015658 1 432 2.4E-171 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 P40_07280 24c6cd1549e282948e0b57e213bb9c24 432 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 426 2.4E-168 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 P40_20200 16b33648c13177eebeabac338e83e984 114 Gene3D G3DSA:1.10.760.10 26 110 8.0E-26 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_20200 16b33648c13177eebeabac338e83e984 114 SUPERFAMILY SSF46626 20 112 7.56E-16 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_20200 16b33648c13177eebeabac338e83e984 114 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 29 106 2.3E-16 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_20200 16b33648c13177eebeabac338e83e984 114 PRINTS PR00607 Class IE cytochrome C signature 97 108 2.0E-9 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 P40_20200 16b33648c13177eebeabac338e83e984 114 PRINTS PR00607 Class IE cytochrome C signature 82 94 2.0E-9 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 P40_20200 16b33648c13177eebeabac338e83e984 114 PRINTS PR00607 Class IE cytochrome C signature 40 51 2.0E-9 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 P40_15705 0cfed461da2330e7e5dc18e5dc482a38 434 SUPERFAMILY SSF56436 178 422 1.51E-66 T 13-10-2018 IPR016187 C-type lectin fold P40_15705 0cfed461da2330e7e5dc18e5dc482a38 434 Pfam PF12867 DinB superfamily 19 148 1.5E-9 T 13-10-2018 IPR024775 DinB-like domain P40_15705 0cfed461da2330e7e5dc18e5dc482a38 434 Pfam PF03781 Sulfatase-modifying factor enzyme 1 343 420 1.3E-8 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 P40_15705 0cfed461da2330e7e5dc18e5dc482a38 434 Pfam PF03781 Sulfatase-modifying factor enzyme 1 180 320 6.4E-20 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 P40_15705 0cfed461da2330e7e5dc18e5dc482a38 434 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 14 420 2.8E-167 T 13-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 P40_15705 0cfed461da2330e7e5dc18e5dc482a38 434 Gene3D G3DSA:3.90.1580.10 337 430 1.1E-10 T 13-10-2018 P40_15705 0cfed461da2330e7e5dc18e5dc482a38 434 Gene3D G3DSA:3.90.1580.10 179 336 1.6E-23 T 13-10-2018 P40_05165 5f50583d01e4d09f55a67f2f4572e272 557 Gene3D G3DSA:3.90.190.10 1 140 4.3E-42 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like P40_05165 5f50583d01e4d09f55a67f2f4572e272 557 SUPERFAMILY SSF51905 156 299 1.41E-28 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_05165 5f50583d01e4d09f55a67f2f4572e272 557 SUPERFAMILY SSF51905 156 542 6.7E-25 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_05165 5f50583d01e4d09f55a67f2f4572e272 557 Gene3D G3DSA:3.50.50.60 271 412 2.1E-89 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_05165 5f50583d01e4d09f55a67f2f4572e272 557 SUPERFAMILY SSF52799 6 133 2.24E-6 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like P40_05165 5f50583d01e4d09f55a67f2f4572e272 557 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 446 453 3.7E-5 T 13-10-2018 P40_05165 5f50583d01e4d09f55a67f2f4572e272 557 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 180 3.7E-5 T 13-10-2018 P40_05165 5f50583d01e4d09f55a67f2f4572e272 557 Pfam PF04273 Putative phosphatase (DUF442) 3 111 3.7E-37 T 13-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 P40_05165 5f50583d01e4d09f55a67f2f4572e272 557 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 158 281 1.0E-9 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_05165 5f50583d01e4d09f55a67f2f4572e272 557 Gene3D G3DSA:3.50.50.60 159 476 2.1E-89 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_05165 5f50583d01e4d09f55a67f2f4572e272 557 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 3 136 1.2E-40 T 13-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 P40_16225 577e06a65f99738743887b1281dd7ee6 217 SMART SM00448 8 121 8.6E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_16225 577e06a65f99738743887b1281dd7ee6 217 SUPERFAMILY SSF46894 147 215 1.73E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_16225 577e06a65f99738743887b1281dd7ee6 217 SUPERFAMILY SSF52172 8 139 3.42E-28 T 13-10-2018 IPR011006 CheY-like superfamily P40_16225 577e06a65f99738743887b1281dd7ee6 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 3.5E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_16225 577e06a65f99738743887b1281dd7ee6 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 3.5E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_16225 577e06a65f99738743887b1281dd7ee6 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 3.5E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_16225 577e06a65f99738743887b1281dd7ee6 217 Gene3D G3DSA:3.40.50.12740 8 215 8.0E-54 T 13-10-2018 P40_16225 577e06a65f99738743887b1281dd7ee6 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 207 2.9E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_16225 577e06a65f99738743887b1281dd7ee6 217 Pfam PF00072 Response regulator receiver domain 10 122 9.3E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_16225 577e06a65f99738743887b1281dd7ee6 217 SMART SM00421 152 209 2.5E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_05840 faeee6673f17d30f26dbc0fd91816ea7 304 SUPERFAMILY SSF51182 25 302 1.22E-70 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_05840 faeee6673f17d30f26dbc0fd91816ea7 304 Pfam PF05726 Pirin C-terminal cupin domain 193 289 2.7E-16 T 13-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 P40_05840 faeee6673f17d30f26dbc0fd91816ea7 304 Gene3D G3DSA:2.60.120.10 162 260 1.1E-64 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_05840 faeee6673f17d30f26dbc0fd91816ea7 304 PIRSF PIRSF006232 18 298 3.5E-81 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 P40_05840 faeee6673f17d30f26dbc0fd91816ea7 304 Gene3D G3DSA:2.60.120.10 34 285 1.1E-64 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_05840 faeee6673f17d30f26dbc0fd91816ea7 304 Pfam PF02678 Pirin 35 140 8.1E-31 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 P40_08740 1ed1fe30d2f8349927b24cc9b97a6c6b 345 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 64 78 6.9E-12 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 P40_08740 1ed1fe30d2f8349927b24cc9b97a6c6b 345 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 281 292 6.9E-12 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 P40_08740 1ed1fe30d2f8349927b24cc9b97a6c6b 345 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 171 191 6.9E-12 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 P40_08740 1ed1fe30d2f8349927b24cc9b97a6c6b 345 Gene3D G3DSA:3.40.50.720 132 331 3.3E-119 T 13-10-2018 P40_08740 1ed1fe30d2f8349927b24cc9b97a6c6b 345 SUPERFAMILY SSF51735 137 339 1.26E-42 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_08740 1ed1fe30d2f8349927b24cc9b97a6c6b 345 Gene3D G3DSA:3.40.50.10860 10 338 3.3E-119 T 13-10-2018 P40_08740 1ed1fe30d2f8349927b24cc9b97a6c6b 345 PIRSF PIRSF000188 1 345 4.8E-126 T 13-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 P40_08740 1ed1fe30d2f8349927b24cc9b97a6c6b 345 SMART SM00839 139 343 1.1E-53 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 P40_08740 1ed1fe30d2f8349927b24cc9b97a6c6b 345 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 214 289 7.2E-9 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 P40_08740 1ed1fe30d2f8349927b24cc9b97a6c6b 345 SUPERFAMILY SSF53223 11 135 4.8E-37 T 13-10-2018 P40_08740 1ed1fe30d2f8349927b24cc9b97a6c6b 345 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 20 128 3.4E-19 T 13-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 P40_03410 977d69b4abe3999b821928a0b5088f63 185 SUPERFAMILY SSF110857 20 129 2.75E-12 T 13-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily P40_03410 977d69b4abe3999b821928a0b5088f63 185 Pfam PF04752 ChaC-like protein 20 182 1.7E-54 T 13-10-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 KEGG: 00480+4.3.2.7|MetaCyc: PWY-7942|Reactome: R-HSA-174403 P40_03410 977d69b4abe3999b821928a0b5088f63 185 Gene3D G3DSA:3.10.490.10 8 183 3.6E-15 T 13-10-2018 P40_01750 9cb41cc43dc854d0d73609f0348d060f 196 Gene3D G3DSA:1.10.357.10 8 195 6.5E-55 T 13-10-2018 P40_01750 9cb41cc43dc854d0d73609f0348d060f 196 SUPERFAMILY SSF48498 86 191 8.53E-16 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_01750 9cb41cc43dc854d0d73609f0348d060f 196 SUPERFAMILY SSF46689 10 89 9.75E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_01750 9cb41cc43dc854d0d73609f0348d060f 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 2.6E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_01750 9cb41cc43dc854d0d73609f0348d060f 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 2.6E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_01750 9cb41cc43dc854d0d73609f0348d060f 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 3.1E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_20165 42a6990a39d97ec4875f99be5fd7ad63 248 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 6 243 6.6E-37 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 P40_20165 42a6990a39d97ec4875f99be5fd7ad63 248 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 248 45.286 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 P40_20165 42a6990a39d97ec4875f99be5fd7ad63 248 Pfam PF02654 Cobalamin-5-phosphate synthase 9 242 9.3E-52 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 P40_13780 4954a7db7fa47e87a4fa763c2ac3905b 104 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 43 104 4.7E-22 T 13-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain P40_13780 4954a7db7fa47e87a4fa763c2ac3905b 104 Pfam PF12836 Helix-hairpin-helix motif 41 103 1.5E-23 T 13-10-2018 P40_13780 4954a7db7fa47e87a4fa763c2ac3905b 104 Gene3D G3DSA:1.10.150.320 22 103 6.6E-23 T 13-10-2018 P40_13780 4954a7db7fa47e87a4fa763c2ac3905b 104 SUPERFAMILY SSF47781 30 104 3.56E-29 T 13-10-2018 IPR010994 RuvA domain 2-like P40_13780 4954a7db7fa47e87a4fa763c2ac3905b 104 SMART SM00278 82 101 0.067 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 P40_13780 4954a7db7fa47e87a4fa763c2ac3905b 104 SMART SM00278 52 71 0.016 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 P40_01495 11ada1d6852c503bea2e584545a76db4 98 PIRSF PIRSF029218 1 98 1.6E-29 T 13-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 P40_01495 11ada1d6852c503bea2e584545a76db4 98 Gene3D G3DSA:3.30.2310.20 1 96 5.8E-29 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily P40_01495 11ada1d6852c503bea2e584545a76db4 98 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 91 2.8E-20 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family P40_16125 c8e379002aadec5ef3e5241e520b840f 245 SUPERFAMILY SSF117143 78 203 9.02E-16 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like P40_16125 c8e379002aadec5ef3e5241e520b840f 245 Pfam PF00460 Flagella basal body rod protein 5 35 1.1E-7 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 P40_16125 c8e379002aadec5ef3e5241e520b840f 245 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 1.6E-29 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G P40_16125 c8e379002aadec5ef3e5241e520b840f 245 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 241 1.3E-19 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain P40_02485 2508dc42138165897c83f814f518a53c 201 TIGRFAM TIGR02661 MauD: methylamine dehydrogenase accessory protein MauD 4 190 9.3E-64 T 13-10-2018 IPR013478 Methylamine dehydrogenase accessory protein MauD GO:0030416 P40_02485 2508dc42138165897c83f814f518a53c 201 SUPERFAMILY SSF52833 47 172 7.03E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_02485 2508dc42138165897c83f814f518a53c 201 Pfam PF00578 AhpC/TSA family 50 160 3.7E-7 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P40_02485 2508dc42138165897c83f814f518a53c 201 Gene3D G3DSA:3.40.30.10 34 175 9.0E-18 T 13-10-2018 P40_20115 e91ee157d150bd38a56b0c03e61d8211 203 SUPERFAMILY SSF52540 13 202 3.68E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_20115 e91ee157d150bd38a56b0c03e61d8211 203 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 33 202 3.8E-59 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 P40_20115 e91ee157d150bd38a56b0c03e61d8211 203 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 202 2.7E-69 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 P40_20115 e91ee157d150bd38a56b0c03e61d8211 203 PIRSF PIRSF015617 6 203 1.0E-70 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 P40_20115 e91ee157d150bd38a56b0c03e61d8211 203 Gene3D G3DSA:3.40.50.300 11 203 1.6E-65 T 13-10-2018 P40_14435 1f603d8f0a6db70b41ce7bf9d006c249 1216 Pfam PF13555 P-loop containing region of AAA domain 3 55 1.3E-9 T 13-10-2018 P40_14435 1f603d8f0a6db70b41ce7bf9d006c249 1216 Gene3D G3DSA:3.40.50.300 905 1168 1.5E-6 T 13-10-2018 P40_14435 1f603d8f0a6db70b41ce7bf9d006c249 1216 SUPERFAMILY SSF52540 18 341 3.45E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_14435 1f603d8f0a6db70b41ce7bf9d006c249 1216 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1050 1135 2.2E-17 T 13-10-2018 P40_06340 1eb40b712721c795f8e2d8e15e6191d1 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.6E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_06340 1eb40b712721c795f8e2d8e15e6191d1 303 Gene3D G3DSA:3.40.190.290 90 292 4.0E-68 T 13-10-2018 P40_06340 1eb40b712721c795f8e2d8e15e6191d1 303 Pfam PF03466 LysR substrate binding domain 88 291 2.2E-41 T 13-10-2018 IPR005119 LysR, substrate-binding P40_06340 1eb40b712721c795f8e2d8e15e6191d1 303 Gene3D G3DSA:1.10.10.10 3 86 4.8E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_06340 1eb40b712721c795f8e2d8e15e6191d1 303 SUPERFAMILY SSF53850 89 296 3.26E-45 T 13-10-2018 P40_06340 1eb40b712721c795f8e2d8e15e6191d1 303 SUPERFAMILY SSF46785 4 84 3.94E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_21325 f52dd724f811e9655b9b6df1a03cdbc9 307 Pfam PF13557 Putative MetA-pathway of phenol degradation 66 303 1.4E-38 T 13-10-2018 IPR025737 MetA-pathway of phenol degradation, putative P40_18475 cfcc289797ca023dca7450aeef9a2ae8 334 Pfam PF00294 pfkB family carbohydrate kinase 59 318 1.3E-53 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB P40_18475 cfcc289797ca023dca7450aeef9a2ae8 334 Gene3D G3DSA:3.40.1190.20 9 316 1.2E-78 T 13-10-2018 IPR029056 Ribokinase-like P40_18475 cfcc289797ca023dca7450aeef9a2ae8 334 Gene3D G3DSA:3.30.1110.10 15 135 1.2E-78 T 13-10-2018 P40_18475 cfcc289797ca023dca7450aeef9a2ae8 334 PRINTS PR00990 Ribokinase signature 58 77 2.7E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 P40_18475 cfcc289797ca023dca7450aeef9a2ae8 334 PRINTS PR00990 Ribokinase signature 208 223 2.7E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 P40_18475 cfcc289797ca023dca7450aeef9a2ae8 334 PRINTS PR00990 Ribokinase signature 246 257 2.7E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 P40_18475 cfcc289797ca023dca7450aeef9a2ae8 334 SUPERFAMILY SSF53613 4 320 1.71E-74 T 13-10-2018 IPR029056 Ribokinase-like P40_18475 cfcc289797ca023dca7450aeef9a2ae8 334 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 275 288 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 P40_05370 418477d924974ccf4c0d321816e351eb 249 Pfam PF02104 SURF1 family 18 227 4.2E-32 T 13-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_02270 2e55a9b4cc54733b699f6d4635748d24 661 SUPERFAMILY SSF52440 3 118 7.91E-50 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_02270 2e55a9b4cc54733b699f6d4635748d24 661 SUPERFAMILY SSF56059 88 353 1.94E-67 T 13-10-2018 P40_02270 2e55a9b4cc54733b699f6d4635748d24 661 Gene3D G3DSA:2.40.50.100 577 653 4.9E-19 T 13-10-2018 P40_02270 2e55a9b4cc54733b699f6d4635748d24 661 Pfam PF00364 Biotin-requiring enzyme 585 650 1.4E-12 T 13-10-2018 IPR000089 Biotin/lipoyl attachment P40_02270 2e55a9b4cc54733b699f6d4635748d24 661 SUPERFAMILY SSF51230 576 651 1.24E-17 T 13-10-2018 IPR011053 Single hybrid motif P40_02270 2e55a9b4cc54733b699f6d4635748d24 661 SMART SM00878 341 445 1.3E-51 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_02270 2e55a9b4cc54733b699f6d4635748d24 661 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_02270 2e55a9b4cc54733b699f6d4635748d24 661 Gene3D G3DSA:3.30.470.130 1 454 1.9E-196 T 13-10-2018 P40_02270 2e55a9b4cc54733b699f6d4635748d24 661 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 158 172 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_02270 2e55a9b4cc54733b699f6d4635748d24 661 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 121 327 6.5E-77 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P40_02270 2e55a9b4cc54733b699f6d4635748d24 661 Pfam PF02785 Biotin carboxylase C-terminal domain 341 446 1.8E-32 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_02270 2e55a9b4cc54733b699f6d4635748d24 661 SUPERFAMILY SSF51246 336 448 6.8E-36 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 P40_02270 2e55a9b4cc54733b699f6d4635748d24 661 Pfam PF00289 Biotin carboxylase, N-terminal domain 7 115 1.3E-44 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P40_18300 61846867fe608abb0ee73dcffe228c13 177 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 13-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18300 61846867fe608abb0ee73dcffe228c13 177 Gene3D G3DSA:3.30.70.1730 4 174 3.5E-37 T 13-10-2018 P40_18300 61846867fe608abb0ee73dcffe228c13 177 SUPERFAMILY SSF160369 4 172 1.1E-57 T 13-10-2018 P40_18300 61846867fe608abb0ee73dcffe228c13 177 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 30 174 4.0E-5 T 13-10-2018 P40_18300 61846867fe608abb0ee73dcffe228c13 177 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 28.58 T 13-10-2018 IPR022973 Ribosomal protein L10 P40_18300 61846867fe608abb0ee73dcffe228c13 177 Pfam PF00466 Ribosomal protein L10 5 101 1.3E-28 T 13-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 P40_06660 eaf78efb332d44fede1d3228b4535575 465 Pfam PF13365 Trypsin-like peptidase domain 98 234 6.8E-32 T 13-10-2018 P40_06660 eaf78efb332d44fede1d3228b4535575 465 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 43 463 7.1E-152 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 P40_06660 eaf78efb332d44fede1d3228b4535575 465 Gene3D G3DSA:2.30.42.10 380 464 3.8E-22 T 13-10-2018 P40_06660 eaf78efb332d44fede1d3228b4535575 465 Gene3D G3DSA:2.40.10.120 41 267 1.7E-84 T 13-10-2018 P40_06660 eaf78efb332d44fede1d3228b4535575 465 SUPERFAMILY SSF50156 396 464 2.5E-14 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 P40_06660 eaf78efb332d44fede1d3228b4535575 465 SMART SM00228 381 457 6.2E-5 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_06660 eaf78efb332d44fede1d3228b4535575 465 SMART SM00228 273 356 1.7E-15 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_06660 eaf78efb332d44fede1d3228b4535575 465 SUPERFAMILY SSF50156 231 356 3.68E-25 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 P40_06660 eaf78efb332d44fede1d3228b4535575 465 Gene3D G3DSA:2.30.42.10 268 375 1.7E-28 T 13-10-2018 P40_06660 eaf78efb332d44fede1d3228b4535575 465 PRINTS PR00834 HtrA/DegQ protease family signature 205 222 2.8E-56 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_06660 eaf78efb332d44fede1d3228b4535575 465 PRINTS PR00834 HtrA/DegQ protease family signature 108 120 2.8E-56 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_06660 eaf78efb332d44fede1d3228b4535575 465 PRINTS PR00834 HtrA/DegQ protease family signature 227 244 2.8E-56 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_06660 eaf78efb332d44fede1d3228b4535575 465 PRINTS PR00834 HtrA/DegQ protease family signature 129 149 2.8E-56 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_06660 eaf78efb332d44fede1d3228b4535575 465 PRINTS PR00834 HtrA/DegQ protease family signature 170 194 2.8E-56 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_06660 eaf78efb332d44fede1d3228b4535575 465 PRINTS PR00834 HtrA/DegQ protease family signature 314 326 2.8E-56 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P40_06660 eaf78efb332d44fede1d3228b4535575 465 Pfam PF13180 PDZ domain 273 361 1.6E-16 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_06660 eaf78efb332d44fede1d3228b4535575 465 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 391 439 1.9E-6 T 13-10-2018 IPR001478 PDZ domain GO:0005515 P40_06660 eaf78efb332d44fede1d3228b4535575 465 SUPERFAMILY SSF50494 43 269 2.43E-65 T 13-10-2018 IPR009003 Peptidase S1, PA clan P40_04685 69a8025301e54a3c9ba177e81f75c875 328 SUPERFAMILY SSF56112 34 308 1.75E-50 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_04685 69a8025301e54a3c9ba177e81f75c875 328 Gene3D G3DSA:3.90.1200.10 98 326 4.4E-66 T 13-10-2018 P40_04685 69a8025301e54a3c9ba177e81f75c875 328 Gene3D G3DSA:3.30.200.20 8 97 1.5E-20 T 13-10-2018 P40_04685 69a8025301e54a3c9ba177e81f75c875 328 Pfam PF01636 Phosphotransferase enzyme family 31 241 2.6E-29 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase P40_12885 1530f740eaf819ea2dbd086f75707841 273 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 268 5.7E-93 T 13-10-2018 P40_12885 1530f740eaf819ea2dbd086f75707841 273 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 262 2.1E-17 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase P40_12885 1530f740eaf819ea2dbd086f75707841 273 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 269 1.3E-80 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 P40_12885 1530f740eaf819ea2dbd086f75707841 273 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 13-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 P40_12885 1530f740eaf819ea2dbd086f75707841 273 Gene3D G3DSA:3.60.10.10 1 270 5.1E-73 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily P40_12885 1530f740eaf819ea2dbd086f75707841 273 SUPERFAMILY SSF56219 1 270 8.64E-80 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily P40_21640 483bfc767d49869324f3f991ee5a22b9 365 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 77 9.9E-11 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_21640 483bfc767d49869324f3f991ee5a22b9 365 SUPERFAMILY SSF52833 1 106 8.97E-15 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_21640 483bfc767d49869324f3f991ee5a22b9 365 Gene3D G3DSA:3.40.30.10 2 93 7.2E-7 T 13-10-2018 P40_21640 483bfc767d49869324f3f991ee5a22b9 365 Gene3D G3DSA:1.20.1050.10 94 232 2.1E-7 T 13-10-2018 P40_21640 483bfc767d49869324f3f991ee5a22b9 365 SUPERFAMILY SSF47616 84 233 4.04E-9 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_21640 483bfc767d49869324f3f991ee5a22b9 365 Pfam PF13410 Glutathione S-transferase, C-terminal domain 164 229 1.9E-8 T 13-10-2018 P40_06810 4876d0da367d3b1f0ea7fbbbd345e5e0 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 217 7.1E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_06810 4876d0da367d3b1f0ea7fbbbd345e5e0 222 SMART SM00862 146 217 4.7E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_06810 4876d0da367d3b1f0ea7fbbbd345e5e0 222 Pfam PF00072 Response regulator receiver domain 4 112 1.5E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_06810 4876d0da367d3b1f0ea7fbbbd345e5e0 222 Gene3D G3DSA:1.10.10.10 123 219 3.1E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_06810 4876d0da367d3b1f0ea7fbbbd345e5e0 222 SUPERFAMILY SSF46894 122 217 7.65E-25 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_06810 4876d0da367d3b1f0ea7fbbbd345e5e0 222 Gene3D G3DSA:3.40.50.2300 1 122 1.7E-39 T 13-10-2018 P40_06810 4876d0da367d3b1f0ea7fbbbd345e5e0 222 SMART SM00448 1 112 1.2E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_06810 4876d0da367d3b1f0ea7fbbbd345e5e0 222 SUPERFAMILY SSF52172 1 124 1.99E-39 T 13-10-2018 IPR011006 CheY-like superfamily P40_02900 14930ccc290c0de83b8816d44e8ca414 314 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 8 305 9.3E-92 T 13-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 P40_02900 14930ccc290c0de83b8816d44e8ca414 314 SUPERFAMILY SSF53474 4 291 6.81E-54 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_02900 14930ccc290c0de83b8816d44e8ca414 314 Pfam PF00561 alpha/beta hydrolase fold 35 290 1.9E-25 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_02900 14930ccc290c0de83b8816d44e8ca414 314 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 36 44 2.0E-12 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 P40_02900 14930ccc290c0de83b8816d44e8ca414 314 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 62 73 2.0E-12 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 P40_02900 14930ccc290c0de83b8816d44e8ca414 314 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 2.0E-12 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 P40_02900 14930ccc290c0de83b8816d44e8ca414 314 Gene3D G3DSA:3.40.50.1820 1 309 6.6E-89 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_02900 14930ccc290c0de83b8816d44e8ca414 314 PIRSF PIRSF006431 1 311 2.6E-106 T 13-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 P40_02900 14930ccc290c0de83b8816d44e8ca414 314 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 4.4E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_02900 14930ccc290c0de83b8816d44e8ca414 314 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 4.4E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_02900 14930ccc290c0de83b8816d44e8ca414 314 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 4.4E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_15740 9748a766ea20f28b753be92ee1bb78b3 348 Pfam PF04199 Putative cyclase 110 277 2.4E-18 T 13-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 P40_15740 9748a766ea20f28b753be92ee1bb78b3 348 Gene3D G3DSA:3.50.30.50 63 348 6.2E-20 T 13-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 P40_15740 9748a766ea20f28b753be92ee1bb78b3 348 SUPERFAMILY SSF102198 89 347 1.57E-19 T 13-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 P40_02690 3900049a233429f4c795f29b3ab7920f 289 Pfam PF05235 CHAD domain 29 229 6.3E-23 T 13-10-2018 IPR007899 CHAD domain P40_02690 3900049a233429f4c795f29b3ab7920f 289 SMART SM00880 9 263 7.7E-10 T 13-10-2018 IPR007899 CHAD domain P40_02690 3900049a233429f4c795f29b3ab7920f 289 Gene3D G3DSA:1.40.20.10 7 286 3.2E-18 T 13-10-2018 IPR038186 CHAD domain superfamily P40_19950 8e81aea33fdcb798856df308950f13ad 275 Gene3D G3DSA:1.10.3720.10 12 270 4.7E-72 T 13-10-2018 IPR035906 MetI-like superfamily P40_19950 8e81aea33fdcb798856df308950f13ad 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 267 3.2E-25 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_19950 8e81aea33fdcb798856df308950f13ad 275 SUPERFAMILY SSF161098 14 263 4.58E-56 T 13-10-2018 IPR035906 MetI-like superfamily P40_19950 8e81aea33fdcb798856df308950f13ad 275 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 265 5.4E-97 T 13-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 P40_19950 8e81aea33fdcb798856df308950f13ad 275 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 6 270 1.1E-123 T 13-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 P40_07845 14afb83f31e590b4d551ff0c25f666db 479 Gene3D G3DSA:1.20.1720.10 20 256 4.1E-45 T 13-10-2018 P40_07845 14afb83f31e590b4d551ff0c25f666db 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 22 46 1.6E-8 T 13-10-2018 P40_07845 14afb83f31e590b4d551ff0c25f666db 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 113 133 1.6E-8 T 13-10-2018 P40_07845 14afb83f31e590b4d551ff0c25f666db 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 208 226 1.6E-8 T 13-10-2018 P40_07845 14afb83f31e590b4d551ff0c25f666db 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 143 167 1.6E-8 T 13-10-2018 P40_07845 14afb83f31e590b4d551ff0c25f666db 479 Gene3D G3DSA:1.20.1250.20 264 475 2.5E-23 T 13-10-2018 P40_07845 14afb83f31e590b4d551ff0c25f666db 479 Pfam PF07690 Major Facilitator Superfamily 24 414 5.7E-49 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_07845 14afb83f31e590b4d551ff0c25f666db 479 SUPERFAMILY SSF103473 10 472 2.88E-71 T 13-10-2018 IPR036259 MFS transporter superfamily P40_07845 14afb83f31e590b4d551ff0c25f666db 479 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 423 1.2E-87 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 P40_15640 64aae9137496f6e1dc7ca394d88dd276 272 SUPERFAMILY SSF52540 6 247 2.77E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_15640 64aae9137496f6e1dc7ca394d88dd276 272 Gene3D G3DSA:3.40.50.300 4 270 2.3E-63 T 13-10-2018 P40_15640 64aae9137496f6e1dc7ca394d88dd276 272 SMART SM00382 35 224 3.8E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_15640 64aae9137496f6e1dc7ca394d88dd276 272 Pfam PF00005 ABC transporter 26 173 1.5E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_15640 64aae9137496f6e1dc7ca394d88dd276 272 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_09130 8480a768764308d06c178a04529b7152 344 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 132 172 1.2E-15 T 13-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 P40_09130 8480a768764308d06c178a04529b7152 344 Gene3D G3DSA:2.160.10.10 173 344 3.4E-70 T 13-10-2018 P40_09130 8480a768764308d06c178a04529b7152 344 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 254 285 3.2E-13 T 13-10-2018 IPR001451 Hexapeptide repeat P40_09130 8480a768764308d06c178a04529b7152 344 Gene3D G3DSA:3.30.60.70 132 172 7.9E-20 T 13-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 P40_09130 8480a768764308d06c178a04529b7152 344 Gene3D G3DSA:3.30.70.2010 1 131 3.3E-37 T 13-10-2018 P40_09130 8480a768764308d06c178a04529b7152 344 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 3 341 43.379 T 13-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 P40_09130 8480a768764308d06c178a04529b7152 344 SUPERFAMILY SSF51161 91 292 6.38E-35 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily P40_09130 8480a768764308d06c178a04529b7152 344 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 5 344 1.5E-195 T 13-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 P40_08225 2fb5b349dbd6751aefa64720ea3a3d1f 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 85 8.4E-11 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family P40_08225 2fb5b349dbd6751aefa64720ea3a3d1f 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 89 1.9E-15 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family P40_08225 2fb5b349dbd6751aefa64720ea3a3d1f 94 Gene3D G3DSA:3.30.2310.20 1 90 2.4E-26 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily P40_04425 41198a250c73ca9f9d6df30b5db47f23 321 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 204 225 - T 13-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 P40_04425 41198a250c73ca9f9d6df30b5db47f23 321 Gene3D G3DSA:1.10.4030.30 98 280 1.1E-29 T 13-10-2018 P40_04425 41198a250c73ca9f9d6df30b5db47f23 321 Gene3D G3DSA:3.10.50.40 167 267 1.1E-29 T 13-10-2018 P40_04425 41198a250c73ca9f9d6df30b5db47f23 321 Pfam PF00639 PPIC-type PPIASE domain 181 264 2.2E-20 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 P40_04425 41198a250c73ca9f9d6df30b5db47f23 321 SUPERFAMILY SSF54534 165 266 7.2E-25 T 13-10-2018 P40_04425 41198a250c73ca9f9d6df30b5db47f23 321 SUPERFAMILY SSF109998 77 192 2.39E-5 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily P40_10830 e6cf5ed4621327c0280eb985d5f43e8d 424 TIGRFAM TIGR00797 matE: MATE efflux family protein 1 396 1.3E-70 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_10830 e6cf5ed4621327c0280eb985d5f43e8d 424 PIRSF PIRSF006603 1 424 1.1E-62 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_10830 e6cf5ed4621327c0280eb985d5f43e8d 424 Pfam PF01554 MatE 2 158 4.3E-24 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_10830 e6cf5ed4621327c0280eb985d5f43e8d 424 Pfam PF01554 MatE 222 383 4.2E-21 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_19725 bc8d9ddc3caed0f2ef70195e0f06d5b3 337 SMART SM00829 10 332 3.1E-13 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P40_19725 bc8d9ddc3caed0f2ef70195e0f06d5b3 337 SUPERFAMILY SSF50129 1 144 9.28E-32 T 13-10-2018 IPR011032 GroES-like superfamily P40_19725 bc8d9ddc3caed0f2ef70195e0f06d5b3 337 Gene3D G3DSA:3.40.50.720 127 274 3.1E-103 T 13-10-2018 P40_19725 bc8d9ddc3caed0f2ef70195e0f06d5b3 337 SUPERFAMILY SSF51735 116 276 1.79E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_19725 bc8d9ddc3caed0f2ef70195e0f06d5b3 337 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 335 4.3E-119 T 13-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 P40_19725 bc8d9ddc3caed0f2ef70195e0f06d5b3 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 93 1.2E-6 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P40_19725 bc8d9ddc3caed0f2ef70195e0f06d5b3 337 Gene3D G3DSA:3.90.180.10 25 331 3.1E-103 T 13-10-2018 P40_19725 bc8d9ddc3caed0f2ef70195e0f06d5b3 337 Pfam PF13602 Zinc-binding dehydrogenase 192 332 1.5E-21 T 13-10-2018 P40_08265 3996357253147a2422e2fba5c25d98b0 440 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 430 2.7E-84 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_08265 3996357253147a2422e2fba5c25d98b0 440 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 435 3.0E-93 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_08265 3996357253147a2422e2fba5c25d98b0 440 PIRSF PIRSF006066 5 439 1.3E-78 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_07120 1e6dfb7b1832302559df4233d4cd6222 262 Gene3D G3DSA:2.10.109.10 56 242 1.8E-69 T 13-10-2018 P40_07120 1e6dfb7b1832302559df4233d4cd6222 262 ProSitePatterns PS00760 Signal peptidases I lysine active site. 124 136 - T 13-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 P40_07120 1e6dfb7b1832302559df4233d4cd6222 262 Gene3D G3DSA:2.170.230.10 133 201 1.8E-69 T 13-10-2018 P40_07120 1e6dfb7b1832302559df4233d4cd6222 262 ProSitePatterns PS00501 Signal peptidases I serine active site. 67 74 - T 13-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 P40_07120 1e6dfb7b1832302559df4233d4cd6222 262 SUPERFAMILY SSF51306 56 248 1.05E-68 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily P40_07120 1e6dfb7b1832302559df4233d4cd6222 262 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 44 241 2.2E-51 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 P40_07120 1e6dfb7b1832302559df4233d4cd6222 262 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 58 74 1.2E-25 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 P40_07120 1e6dfb7b1832302559df4233d4cd6222 262 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 202 221 1.2E-25 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 P40_07120 1e6dfb7b1832302559df4233d4cd6222 262 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 122 134 1.2E-25 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 P40_07120 1e6dfb7b1832302559df4233d4cd6222 262 Pfam PF10502 Signal peptidase, peptidase S26 196 239 3.5E-6 T 13-10-2018 IPR019533 Peptidase S26 P40_07120 1e6dfb7b1832302559df4233d4cd6222 262 ProSitePatterns PS00761 Signal peptidases I signature 3. 207 220 - T 13-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 P40_07120 1e6dfb7b1832302559df4233d4cd6222 262 Pfam PF00717 Peptidase S24-like 64 145 1.6E-20 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 Pfam PF08272 Topoisomerase I zinc-ribbon-like 776 811 7.5E-12 T 13-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 Pfam PF08272 Topoisomerase I zinc-ribbon-like 842 881 3.1E-19 T 13-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 750 56.347 T 13-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 Gene3D G3DSA:2.20.25.10 826 884 5.7E-25 T 13-10-2018 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 505 519 2.5E-35 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 117 130 2.5E-35 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 202 220 2.5E-35 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 328 337 2.5E-35 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 404 420 2.5E-35 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 323 337 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 Pfam PF01751 Toprim domain 5 153 1.4E-29 T 13-10-2018 IPR006171 TOPRIM domain P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 650 4.8E-241 T 13-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 SUPERFAMILY SSF56712 3 628 4.71E-197 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 SMART SM00493 3 143 5.9E-26 T 13-10-2018 IPR006171 TOPRIM domain P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 Gene3D G3DSA:3.30.65.10 716 762 1.2E-5 T 13-10-2018 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 Gene3D G3DSA:3.30.65.10 763 825 4.6E-26 T 13-10-2018 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 SUPERFAMILY SSF57783 762 824 4.25E-17 T 13-10-2018 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 Gene3D G3DSA:2.70.20.10 224 488 2.9E-159 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 SMART SM00436 144 232 4.5E-47 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 Pfam PF01131 DNA topoisomerase 168 579 3.9E-128 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 SMART SM00437 286 542 2.4E-115 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 728 763 3.5E-7 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 616 641 5.0E-7 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 Gene3D G3DSA:1.10.290.10 294 418 2.9E-159 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 SUPERFAMILY SSF57783 718 760 1.45E-6 T 13-10-2018 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 Gene3D G3DSA:1.10.460.10 176 586 2.9E-159 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 Gene3D G3DSA:3.40.50.140 1 174 1.6E-65 T 13-10-2018 P40_08670 a8deea7bd8efbeeace4bd4ed99126cd8 908 SUPERFAMILY SSF57783 827 883 1.62E-20 T 13-10-2018 P40_21140 30fb67cb65e60c3ec495c39247b7a0b6 199 Gene3D G3DSA:3.40.50.850 6 198 6.1E-43 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_21140 30fb67cb65e60c3ec495c39247b7a0b6 199 Pfam PF00857 Isochorismatase family 27 195 4.5E-32 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 P40_21140 30fb67cb65e60c3ec495c39247b7a0b6 199 SUPERFAMILY SSF52499 18 195 3.53E-38 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_11805 4b6493d6a27f1b38cd0e56b4f5214e60 110 PIRSF PIRSF003113 1 100 1.1E-32 T 13-10-2018 IPR002634 BolA protein P40_11805 4b6493d6a27f1b38cd0e56b4f5214e60 110 SUPERFAMILY SSF82657 1 89 4.58E-29 T 13-10-2018 IPR036065 BolA-like superfamily P40_11805 4b6493d6a27f1b38cd0e56b4f5214e60 110 Gene3D G3DSA:3.30.300.90 1 89 1.8E-31 T 13-10-2018 P40_11805 4b6493d6a27f1b38cd0e56b4f5214e60 110 Pfam PF01722 BolA-like protein 12 84 2.7E-27 T 13-10-2018 IPR002634 BolA protein P40_16880 ef4a304e07f3e1c592a819133a6ffceb 206 Pfam PF02545 Maf-like protein 13 193 3.3E-50 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 P40_16880 ef4a304e07f3e1c592a819133a6ffceb 206 Gene3D G3DSA:3.90.950.10 11 197 9.4E-61 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like P40_16880 ef4a304e07f3e1c592a819133a6ffceb 206 TIGRFAM TIGR00172 maf: septum formation protein Maf 12 192 4.6E-44 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 P40_16880 ef4a304e07f3e1c592a819133a6ffceb 206 Hamap MF_00528 Septum formation protein Maf [maf]. 12 199 30.933 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 P40_16880 ef4a304e07f3e1c592a819133a6ffceb 206 SUPERFAMILY SSF52972 11 192 7.19E-53 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like P40_16880 ef4a304e07f3e1c592a819133a6ffceb 206 PIRSF PIRSF006305 5 198 7.5E-46 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 P40_16790 783c5f85f47145f7f463035b391eb361 185 Gene3D G3DSA:2.60.450.10 61 184 6.2E-10 T 13-10-2018 P40_16790 783c5f85f47145f7f463035b391eb361 185 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 12 176 2.5E-28 T 13-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related P40_16790 783c5f85f47145f7f463035b391eb361 185 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 12 177 2.2E-32 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 P40_16505 0b0ba6435b224f4796026a7c55898310 599 Gene3D G3DSA:3.40.50.2300 366 585 7.7E-79 T 13-10-2018 P40_16505 0b0ba6435b224f4796026a7c55898310 599 Gene3D G3DSA:3.40.50.2300 264 584 7.7E-79 T 13-10-2018 P40_16505 0b0ba6435b224f4796026a7c55898310 599 Pfam PF04348 LppC putative lipoprotein 97 591 9.8E-109 T 13-10-2018 IPR007443 Penicillin-binding protein activator LpoA P40_16505 0b0ba6435b224f4796026a7c55898310 599 Gene3D G3DSA:1.25.40.650 153 258 4.3E-21 T 13-10-2018 P40_16505 0b0ba6435b224f4796026a7c55898310 599 SUPERFAMILY SSF53822 261 592 2.59E-65 T 13-10-2018 IPR028082 Periplasmic binding protein-like I P40_03045 5a2d2053a01de58d11249aa35af20473 304 PIRSF PIRSF026649 3 304 3.2E-94 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 P40_03045 5a2d2053a01de58d11249aa35af20473 304 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 304 42.767 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 P40_03045 5a2d2053a01de58d11249aa35af20473 304 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 13 304 1.0E-96 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 P40_03045 5a2d2053a01de58d11249aa35af20473 304 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 294 4.4E-70 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 P40_13645 ea837225d0735372ec70a891c13051ed 144 Gene3D G3DSA:1.10.10.10 1 144 1.1E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_13645 ea837225d0735372ec70a891c13051ed 144 SUPERFAMILY SSF46785 7 143 4.27E-27 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_13645 ea837225d0735372ec70a891c13051ed 144 Pfam PF12802 MarR family 35 95 1.5E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_13645 ea837225d0735372ec70a891c13051ed 144 SMART SM00347 29 132 1.5E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_13645 ea837225d0735372ec70a891c13051ed 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 2.1E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_13645 ea837225d0735372ec70a891c13051ed 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 2.1E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_13645 ea837225d0735372ec70a891c13051ed 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 2.1E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_13645 ea837225d0735372ec70a891c13051ed 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 2.1E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_14760 c776d4a02f6de27e589d634dda62d796 98 ProSitePatterns PS01047 Heavy-metal-associated domain. 29 58 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 P40_14760 c776d4a02f6de27e589d634dda62d796 98 Pfam PF00403 Heavy-metal-associated domain 27 86 3.0E-14 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 P40_14760 c776d4a02f6de27e589d634dda62d796 98 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 89 2.1E-38 T 13-10-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 P40_14760 c776d4a02f6de27e589d634dda62d796 98 PRINTS PR00946 Mercury scavenger protein signature 77 91 4.4E-28 T 13-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 P40_14760 c776d4a02f6de27e589d634dda62d796 98 PRINTS PR00946 Mercury scavenger protein signature 2 20 4.4E-28 T 13-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 P40_14760 c776d4a02f6de27e589d634dda62d796 98 PRINTS PR00946 Mercury scavenger protein signature 32 48 4.4E-28 T 13-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 P40_14760 c776d4a02f6de27e589d634dda62d796 98 PRINTS PR00946 Mercury scavenger protein signature 48 63 4.4E-28 T 13-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 P40_14760 c776d4a02f6de27e589d634dda62d796 98 PRINTS PR00946 Mercury scavenger protein signature 63 77 4.4E-28 T 13-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 P40_14760 c776d4a02f6de27e589d634dda62d796 98 Gene3D G3DSA:3.30.70.100 21 89 7.1E-21 T 13-10-2018 P40_14760 c776d4a02f6de27e589d634dda62d796 98 SUPERFAMILY SSF55008 20 92 2.36E-20 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 P40_19400 5439b0ce2e00718698678fb56f4eafc0 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 6.6E-207 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 P40_19400 5439b0ce2e00718698678fb56f4eafc0 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 184 325 6.4E-40 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_19400 5439b0ce2e00718698678fb56f4eafc0 443 Gene3D G3DSA:1.10.8.60 331 440 8.8E-36 T 13-10-2018 P40_19400 5439b0ce2e00718698678fb56f4eafc0 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 331 401 2.2E-6 T 13-10-2018 IPR019489 Clp ATPase, C-terminal P40_19400 5439b0ce2e00718698678fb56f4eafc0 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 42.294 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 P40_19400 5439b0ce2e00718698678fb56f4eafc0 443 SUPERFAMILY SSF52540 4 440 4.73E-88 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_19400 5439b0ce2e00718698678fb56f4eafc0 443 SMART SM01086 331 429 7.4E-17 T 13-10-2018 IPR019489 Clp ATPase, C-terminal P40_19400 5439b0ce2e00718698678fb56f4eafc0 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 145 7.3E-8 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_19400 5439b0ce2e00718698678fb56f4eafc0 443 SMART SM00382 49 328 2.0E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_00220 a380fa8628b320dbfe2c9d8615eb7cb9 649 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 131 564 1.3E-94 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_00220 a380fa8628b320dbfe2c9d8615eb7cb9 649 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 31 634 1.5E-183 T 13-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ P40_16535 6753ac67027d2dedaf6ecee315c81668 401 SUPERFAMILY SSF103473 12 396 6.8E-64 T 13-10-2018 IPR036259 MFS transporter superfamily P40_16535 6753ac67027d2dedaf6ecee315c81668 401 Gene3D G3DSA:1.20.1250.20 10 393 1.5E-58 T 13-10-2018 P40_16535 6753ac67027d2dedaf6ecee315c81668 401 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 25 387 7.3E-36 T 13-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB P40_20435 ed489fbd30093b7ab0407932568fb845 372 SUPERFAMILY SSF47203 225 368 3.7E-32 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_20435 ed489fbd30093b7ab0407932568fb845 372 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 224 364 1.3E-22 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_20435 ed489fbd30093b7ab0407932568fb845 372 Gene3D G3DSA:2.40.110.10 130 227 3.2E-10 T 13-10-2018 P40_20435 ed489fbd30093b7ab0407932568fb845 372 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 117 2.4E-9 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_20435 ed489fbd30093b7ab0407932568fb845 372 Gene3D G3DSA:1.20.140.10 229 372 5.2E-31 T 13-10-2018 P40_20435 ed489fbd30093b7ab0407932568fb845 372 SUPERFAMILY SSF56645 1 220 2.49E-30 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_20435 ed489fbd30093b7ab0407932568fb845 372 Gene3D G3DSA:1.10.540.10 3 119 1.2E-21 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_09070 3cd1beeba0a8c53b36a9adf9eaa6c50b 258 Gene3D G3DSA:3.40.50.300 7 253 8.4E-82 T 13-10-2018 P40_09070 3cd1beeba0a8c53b36a9adf9eaa6c50b 258 SUPERFAMILY SSF52540 38 227 1.27E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_09070 3cd1beeba0a8c53b36a9adf9eaa6c50b 258 PIRSF PIRSF028756 15 251 5.1E-56 T 13-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 P40_09070 3cd1beeba0a8c53b36a9adf9eaa6c50b 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 18 233 6.4E-54 T 13-10-2018 IPR022488 Polyphosphate kinase-2-related P40_17555 56720e752d2334ce24b692bc5f52794e 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 54 1.3E-12 T 13-10-2018 P40_17555 56720e752d2334ce24b692bc5f52794e 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 3.9E-22 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM P40_17555 56720e752d2334ce24b692bc5f52794e 84 Gene3D G3DSA:3.40.1620.10 1 40 5.5E-19 T 13-10-2018 P40_17555 56720e752d2334ce24b692bc5f52794e 84 Gene3D G3DSA:1.10.1220.170 41 84 2.5E-14 T 13-10-2018 P40_17555 56720e752d2334ce24b692bc5f52794e 84 SUPERFAMILY SSF143120 1 79 2.35E-24 T 13-10-2018 IPR036165 YefM-like superfamily P40_13685 48bd524b9c75481e566e096e84e4caac 158 Pfam PF14539 Domain of unknown function (DUF4442) 19 150 3.6E-54 T 13-10-2018 IPR027961 Protein of unknown function DUF4442 P40_13685 48bd524b9c75481e566e096e84e4caac 158 SUPERFAMILY SSF54637 18 150 1.07E-22 T 13-10-2018 IPR029069 HotDog domain superfamily P40_13685 48bd524b9c75481e566e096e84e4caac 158 Gene3D G3DSA:3.10.129.10 12 153 4.3E-41 T 13-10-2018 P40_03790 4fc8b044fc6746af47cc802f40125808 273 Gene3D G3DSA:3.90.1720.10 26 190 3.5E-16 T 13-10-2018 P40_03790 4fc8b044fc6746af47cc802f40125808 273 SUPERFAMILY SSF54001 35 231 1.18E-27 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily P40_03790 4fc8b044fc6746af47cc802f40125808 273 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 37 134 1.1E-11 T 13-10-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family P40_08760 916f808c690b17af5305845c494d0fd2 291 SUPERFAMILY SSF54637 6 114 4.66E-39 T 13-10-2018 IPR029069 HotDog domain superfamily P40_08760 916f808c690b17af5305845c494d0fd2 291 SUPERFAMILY SSF54637 117 283 2.75E-54 T 13-10-2018 IPR029069 HotDog domain superfamily P40_08760 916f808c690b17af5305845c494d0fd2 291 Pfam PF13622 Thioesterase-like superfamily 29 282 3.5E-58 T 13-10-2018 P40_08760 916f808c690b17af5305845c494d0fd2 291 Gene3D G3DSA:3.10.129.90 2 287 3.3E-102 T 13-10-2018 P40_08760 916f808c690b17af5305845c494d0fd2 291 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 1.1E-88 T 13-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 P40_06800 f6dfa6a2e2895b628eae9b991a8eb020 104 Pfam PF03413 Peptidase propeptide and YPEB domain 44 100 9.4E-12 T 13-10-2018 IPR025711 PepSY domain P40_06800 f6dfa6a2e2895b628eae9b991a8eb020 104 Gene3D G3DSA:3.10.450.40 33 104 6.0E-12 T 13-10-2018 P40_04695 39d3b708f98db193171920d730511882 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 8 218 4.4E-95 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 P40_04695 39d3b708f98db193171920d730511882 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 35 49 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 P40_04695 39d3b708f98db193171920d730511882 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 8 205 1.8E-86 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 P40_04695 39d3b708f98db193171920d730511882 224 PIRSF PIRSF001461 2 224 6.2E-100 T 13-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 P40_04695 39d3b708f98db193171920d730511882 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 138 160 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 P40_04695 39d3b708f98db193171920d730511882 224 Gene3D G3DSA:3.20.20.70 7 223 4.6E-83 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_04695 39d3b708f98db193171920d730511882 224 SUPERFAMILY SSF51366 6 220 5.18E-74 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 P40_21300 0899ef9dad8a54aadb3c206e1f7d8664 720 Gene3D G3DSA:1.10.10.160 115 189 6.5E-99 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily P40_21300 0899ef9dad8a54aadb3c206e1f7d8664 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 273 1.2E-72 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 P40_21300 0899ef9dad8a54aadb3c206e1f7d8664 720 Gene3D G3DSA:3.40.50.300 11 275 6.5E-99 T 13-10-2018 P40_21300 0899ef9dad8a54aadb3c206e1f7d8664 720 Pfam PF13361 UvrD-like helicase C-terminal domain 279 618 8.0E-76 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 P40_21300 0899ef9dad8a54aadb3c206e1f7d8664 720 Gene3D G3DSA:3.40.50.300 283 638 7.5E-129 T 13-10-2018 P40_21300 0899ef9dad8a54aadb3c206e1f7d8664 720 SUPERFAMILY SSF52540 6 644 2.6E-180 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_21300 0899ef9dad8a54aadb3c206e1f7d8664 720 Gene3D G3DSA:1.10.486.10 384 540 7.5E-129 T 13-10-2018 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 Gene3D G3DSA:3.20.20.60 407 744 5.2E-108 T 13-10-2018 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 Gene3D G3DSA:1.10.274.10 196 320 4.0E-61 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 Gene3D G3DSA:3.50.30.10 180 406 4.0E-61 T 13-10-2018 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 Pfam PF13185 GAF domain 17 154 1.7E-18 T 13-10-2018 IPR003018 GAF domain GO:0005515 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 SUPERFAMILY SSF51621 427 713 5.23E-101 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 Gene3D G3DSA:3.30.450.40 1 163 5.6E-49 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 SUPERFAMILY SSF55781 2 158 1.11E-32 T 13-10-2018 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 619 637 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 181 737 1.5E-137 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 425 713 1.8E-99 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 Pfam PF05524 PEP-utilising enzyme, N-terminal 179 300 2.8E-23 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 SUPERFAMILY SSF47831 204 315 7.06E-29 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 SMART SM00065 17 164 4.1E-24 T 13-10-2018 IPR003018 GAF domain GO:0005515 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 SUPERFAMILY SSF52009 299 419 1.44E-30 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 Pfam PF00391 PEP-utilising enzyme, mobile domain 325 398 5.4E-20 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 619 634 1.8E-24 T 13-10-2018 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 636 651 1.8E-24 T 13-10-2018 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 466 485 1.8E-24 T 13-10-2018 P40_02145 0bf8c4962a2a31cd2b241ebf09966adb 758 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 672 684 1.8E-24 T 13-10-2018 P40_08770 86145f2ba310a72a28ce5de5ddd36f47 448 Pfam PF11973 NQRA C-terminal domain 263 311 9.1E-21 T 13-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 P40_08770 86145f2ba310a72a28ce5de5ddd36f47 448 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 448 45.944 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 P40_08770 86145f2ba310a72a28ce5de5ddd36f47 448 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 447 2.6E-174 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 P40_08770 86145f2ba310a72a28ce5de5ddd36f47 448 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 3.2E-111 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 P40_01380 73d055af8f987ac1fdc60b70dacd5723 530 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 256 3.7E-13 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_01380 73d055af8f987ac1fdc60b70dacd5723 530 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 339 525 5.0E-10 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_01380 73d055af8f987ac1fdc60b70dacd5723 530 Gene3D G3DSA:1.10.3720.10 280 529 5.2E-32 T 13-10-2018 IPR035906 MetI-like superfamily P40_01380 73d055af8f987ac1fdc60b70dacd5723 530 SUPERFAMILY SSF161098 277 526 2.4E-36 T 13-10-2018 IPR035906 MetI-like superfamily P40_01380 73d055af8f987ac1fdc60b70dacd5723 530 SUPERFAMILY SSF161098 13 258 4.32E-40 T 13-10-2018 IPR035906 MetI-like superfamily P40_01380 73d055af8f987ac1fdc60b70dacd5723 530 Gene3D G3DSA:1.10.3720.10 12 264 4.9E-50 T 13-10-2018 IPR035906 MetI-like superfamily P40_09355 6c4ec312bea6cc7a194c7a8c7e7c4a64 343 Pfam PF00248 Aldo/keto reductase family 16 318 6.1E-69 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain P40_09355 6c4ec312bea6cc7a194c7a8c7e7c4a64 343 SUPERFAMILY SSF51430 1 318 3.01E-98 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_09355 6c4ec312bea6cc7a194c7a8c7e7c4a64 343 PRINTS PR00069 Aldo-keto reductase signature 48 72 2.5E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_09355 6c4ec312bea6cc7a194c7a8c7e7c4a64 343 PRINTS PR00069 Aldo-keto reductase signature 143 160 2.5E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_09355 6c4ec312bea6cc7a194c7a8c7e7c4a64 343 PRINTS PR00069 Aldo-keto reductase signature 112 130 2.5E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_09355 6c4ec312bea6cc7a194c7a8c7e7c4a64 343 Gene3D G3DSA:3.20.20.100 1 343 1.7E-141 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_06925 164c9015d071f83a707de5bc75e3e2a9 650 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 154 2.8E-28 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_06925 164c9015d071f83a707de5bc75e3e2a9 650 SUPERFAMILY SSF56935 21 650 1.42E-125 T 13-10-2018 P40_06925 164c9015d071f83a707de5bc75e3e2a9 650 Gene3D G3DSA:2.40.170.20 165 650 5.1E-140 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_06925 164c9015d071f83a707de5bc75e3e2a9 650 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 633 650 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site P40_06925 164c9015d071f83a707de5bc75e3e2a9 650 Pfam PF00593 TonB dependent receptor 185 649 2.1E-59 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_06925 164c9015d071f83a707de5bc75e3e2a9 650 Gene3D G3DSA:2.170.130.10 28 159 2.1E-40 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_07500 43a21f658e027658810f3a5548f535e2 92 Gene3D G3DSA:3.30.2310.20 1 92 4.9E-21 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily P40_07500 43a21f658e027658810f3a5548f535e2 92 SUPERFAMILY SSF143011 22 92 3.14E-13 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily P40_07500 43a21f658e027658810f3a5548f535e2 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 8 92 1.3E-17 T 13-10-2018 IPR007711 Toxin HigB-1 P40_08065 25cd714b715a70cb995448596806663b 166 SMART SM00738 7 105 1.5E-23 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 P40_08065 25cd714b715a70cb995448596806663b 166 SUPERFAMILY SSF82679 9 107 2.88E-29 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 P40_08065 25cd714b715a70cb995448596806663b 166 Pfam PF02357 Transcription termination factor nusG 9 101 3.6E-23 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 P40_08065 25cd714b715a70cb995448596806663b 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 10 163 1.1E-48 T 13-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 P40_08065 25cd714b715a70cb995448596806663b 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 7 166 45.196 T 13-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 P40_08065 25cd714b715a70cb995448596806663b 166 SUPERFAMILY SSF50104 113 164 3.21E-6 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily P40_08065 25cd714b715a70cb995448596806663b 166 Gene3D G3DSA:3.30.70.940 8 165 7.5E-54 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 SMART SM00100 2 121 2.2E-21 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 PRINTS PR00103 cAMP-dependent protein kinase signature 23 37 2.8E-5 T 13-10-2018 P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 PRINTS PR00103 cAMP-dependent protein kinase signature 140 152 2.8E-5 T 13-10-2018 P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 PRINTS PR00103 cAMP-dependent protein kinase signature 81 92 2.8E-5 T 13-10-2018 P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 PRINTS PR00103 cAMP-dependent protein kinase signature 38 52 2.8E-5 T 13-10-2018 P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 PRINTS PR00103 cAMP-dependent protein kinase signature 68 77 2.8E-5 T 13-10-2018 P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 SUPERFAMILY SSF46785 138 206 2.97E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 Gene3D G3DSA:1.10.10.10 138 206 1.0E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 Gene3D G3DSA:2.60.120.10 10 137 1.9E-46 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 Pfam PF00027 Cyclic nucleotide-binding domain 20 108 1.2E-23 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 Pfam PF00325 Bacterial regulatory proteins, crp family 165 195 2.2E-14 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 SUPERFAMILY SSF51206 11 136 8.25E-34 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 SMART SM00419 159 207 4.6E-15 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 181 196 4.7E-9 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 165 181 4.7E-9 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 70 88 - T 13-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site P40_04780 1b48a457c3ece7bfb2d753a583f58774 209 ProSitePatterns PS00042 Crp-type HTH domain signature. 167 190 - T 13-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 P40_11660 04bd8a1d11911ea00531824e253185bc 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 1.8E-8 T 13-10-2018 P40_11660 04bd8a1d11911ea00531824e253185bc 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 301 325 1.8E-8 T 13-10-2018 P40_11660 04bd8a1d11911ea00531824e253185bc 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 1.8E-8 T 13-10-2018 P40_11660 04bd8a1d11911ea00531824e253185bc 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 1.8E-8 T 13-10-2018 P40_11660 04bd8a1d11911ea00531824e253185bc 450 Pfam PF07690 Major Facilitator Superfamily 21 409 1.8E-45 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_11660 04bd8a1d11911ea00531824e253185bc 450 Gene3D G3DSA:1.20.1250.20 258 447 2.0E-22 T 13-10-2018 P40_11660 04bd8a1d11911ea00531824e253185bc 450 SUPERFAMILY SSF103473 7 442 9.02E-64 T 13-10-2018 IPR036259 MFS transporter superfamily P40_11660 04bd8a1d11911ea00531824e253185bc 450 Gene3D G3DSA:1.20.1720.10 15 242 8.9E-39 T 13-10-2018 P40_09570 c91508042219458fcef5bff20747bd7c 364 Gene3D G3DSA:3.40.50.1820 42 363 1.3E-19 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_09570 c91508042219458fcef5bff20747bd7c 364 Pfam PF00561 alpha/beta hydrolase fold 92 339 2.7E-13 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_09570 c91508042219458fcef5bff20747bd7c 364 SUPERFAMILY SSF53474 58 359 3.94E-33 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_04760 2e6c3d6ee2b83c41b0e201b328adcee3 496 Gene3D G3DSA:3.60.120.10 2 487 4.3E-181 T 13-10-2018 IPR005801 ADC synthase GO:0009058 P40_04760 2e6c3d6ee2b83c41b0e201b328adcee3 496 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 168 2.3E-31 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 P40_04760 2e6c3d6ee2b83c41b0e201b328adcee3 496 PRINTS PR00095 Anthranilate synthase component I signature 336 349 2.3E-25 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 P40_04760 2e6c3d6ee2b83c41b0e201b328adcee3 496 PRINTS PR00095 Anthranilate synthase component I signature 322 335 2.3E-25 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 P40_04760 2e6c3d6ee2b83c41b0e201b328adcee3 496 PRINTS PR00095 Anthranilate synthase component I signature 431 445 2.3E-25 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 P40_04760 2e6c3d6ee2b83c41b0e201b328adcee3 496 PRINTS PR00095 Anthranilate synthase component I signature 416 430 2.3E-25 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 P40_04760 2e6c3d6ee2b83c41b0e201b328adcee3 496 Pfam PF00425 chorismate binding enzyme 222 474 3.3E-98 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal P40_04760 2e6c3d6ee2b83c41b0e201b328adcee3 496 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 482 3.3E-171 T 13-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 P40_04760 2e6c3d6ee2b83c41b0e201b328adcee3 496 SUPERFAMILY SSF56322 14 484 1.7E-155 T 13-10-2018 IPR005801 ADC synthase GO:0009058 P40_01920 f91723efddbfa0eb217bcd431e54dee8 412 Gene3D G3DSA:3.40.50.1820 2 231 3.4E-53 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_01920 f91723efddbfa0eb217bcd431e54dee8 412 Gene3D G3DSA:3.10.450.50 239 376 2.8E-20 T 13-10-2018 P40_01920 f91723efddbfa0eb217bcd431e54dee8 412 SUPERFAMILY SSF54427 237 381 1.25E-22 T 13-10-2018 IPR032710 NTF2-like domain superfamily P40_01920 f91723efddbfa0eb217bcd431e54dee8 412 SUPERFAMILY SSF53474 2 230 3.93E-42 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_01920 f91723efddbfa0eb217bcd431e54dee8 412 Pfam PF01738 Dienelactone hydrolase family 15 230 2.6E-46 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 P40_20070 c2cd8b57e0fd51a2180fb389872563ae 144 SUPERFAMILY SSF54637 5 142 3.23E-43 T 13-10-2018 IPR029069 HotDog domain superfamily P40_20070 c2cd8b57e0fd51a2180fb389872563ae 144 Pfam PF01575 MaoC like domain 18 121 4.0E-24 T 13-10-2018 IPR002539 MaoC-like dehydratase domain P40_20070 c2cd8b57e0fd51a2180fb389872563ae 144 Gene3D G3DSA:3.10.129.10 3 141 7.3E-44 T 13-10-2018 P40_15280 47ead2fe0159eed16825fe71ad1f56c2 200 Pfam PF00578 AhpC/TSA family 5 139 1.7E-32 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P40_15280 47ead2fe0159eed16825fe71ad1f56c2 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 5.3E-12 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P40_15280 47ead2fe0159eed16825fe71ad1f56c2 200 Gene3D G3DSA:3.40.30.10 2 197 1.4E-70 T 13-10-2018 P40_15280 47ead2fe0159eed16825fe71ad1f56c2 200 SUPERFAMILY SSF52833 3 194 8.47E-65 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_15280 47ead2fe0159eed16825fe71ad1f56c2 200 PIRSF PIRSF000239 1 199 4.3E-56 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P40_20455 f94e4f73860b7f676a8d415b28f28133 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_20455 f94e4f73860b7f676a8d415b28f28133 517 Gene3D G3DSA:3.30.300.310 410 511 1.1E-32 T 13-10-2018 P40_20455 f94e4f73860b7f676a8d415b28f28133 517 Gene3D G3DSA:3.40.50.12780 2 407 3.6E-114 T 13-10-2018 P40_20455 f94e4f73860b7f676a8d415b28f28133 517 SUPERFAMILY SSF56801 3 510 1.57E-144 T 13-10-2018 P40_20455 f94e4f73860b7f676a8d415b28f28133 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 423 498 9.0E-22 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_20455 f94e4f73860b7f676a8d415b28f28133 517 Pfam PF00501 AMP-binding enzyme 10 414 3.9E-97 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_15230 454bd25a4429ee6a899deb78dcfc13e1 218 Gene3D G3DSA:1.10.357.10 15 215 1.8E-65 T 13-10-2018 P40_15230 454bd25a4429ee6a899deb78dcfc13e1 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 61 2.5E-13 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_15230 454bd25a4429ee6a899deb78dcfc13e1 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 3.6E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_15230 454bd25a4429ee6a899deb78dcfc13e1 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 3.6E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_15230 454bd25a4429ee6a899deb78dcfc13e1 218 SUPERFAMILY SSF46689 9 82 3.28E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_15230 454bd25a4429ee6a899deb78dcfc13e1 218 SUPERFAMILY SSF48498 87 214 4.36E-32 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_05765 d4045be6f9e6ee5447d7a9b9ee9236f7 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.1E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_05765 d4045be6f9e6ee5447d7a9b9ee9236f7 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.1E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_05765 d4045be6f9e6ee5447d7a9b9ee9236f7 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.1E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_05765 d4045be6f9e6ee5447d7a9b9ee9236f7 135 Gene3D G3DSA:1.10.1660.10 1 125 5.2E-34 T 13-10-2018 P40_05765 d4045be6f9e6ee5447d7a9b9ee9236f7 135 SMART SM00422 1 70 7.0E-29 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_05765 d4045be6f9e6ee5447d7a9b9ee9236f7 135 SUPERFAMILY SSF46955 1 126 2.86E-35 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_05765 d4045be6f9e6ee5447d7a9b9ee9236f7 135 Pfam PF09278 MerR, DNA binding 44 107 6.9E-20 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding P40_05765 d4045be6f9e6ee5447d7a9b9ee9236f7 135 Pfam PF00376 MerR family regulatory protein 2 39 2.3E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_05765 d4045be6f9e6ee5447d7a9b9ee9236f7 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_05765 d4045be6f9e6ee5447d7a9b9ee9236f7 135 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 3.0E-50 T 13-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 P40_19995 2b0ce440441a42e8f37700b0b35197be 177 SUPERFAMILY SSF46626 1 150 2.4E-12 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_19995 2b0ce440441a42e8f37700b0b35197be 177 Gene3D G3DSA:1.10.760.10 40 153 1.3E-10 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_19995 2b0ce440441a42e8f37700b0b35197be 177 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 74 148 1.1E-10 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_08680 1e7b65482e6013e31bce31702cb436bf 341 Gene3D G3DSA:3.10.580.10 172 319 3.2E-33 T 13-10-2018 P40_08680 1e7b65482e6013e31bce31702cb436bf 341 SUPERFAMILY SSF54631 183 319 2.1E-25 T 13-10-2018 P40_08680 1e7b65482e6013e31bce31702cb436bf 341 Pfam PF01595 Domain of unknown function DUF21 7 178 3.3E-29 T 13-10-2018 IPR002550 CNNM, transmembrane domain P40_08680 1e7b65482e6013e31bce31702cb436bf 341 Pfam PF00571 CBS domain 195 248 8.7E-7 T 13-10-2018 IPR000644 CBS domain P40_00695 87722ce0b43a87380ba2805df5231097 64 Pfam PF09526 Probable metal-binding protein (DUF2387) 1 50 4.2E-15 T 13-10-2018 IPR012658 Conserved hypothetical protein CHP02443 P40_00695 87722ce0b43a87380ba2805df5231097 64 SUPERFAMILY SSF57783 5 49 4.82E-5 T 13-10-2018 P40_14255 8639bfd020ee7911998f9c06e3d1627e 252 Pfam PF02613 Nitrate reductase delta subunit 34 153 1.0E-12 T 13-10-2018 IPR020945 DMSO/Nitrate reductase chaperone P40_14255 8639bfd020ee7911998f9c06e3d1627e 252 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 14 166 3.2E-37 T 13-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 P40_14255 8639bfd020ee7911998f9c06e3d1627e 252 SUPERFAMILY SSF89155 9 169 1.96E-29 T 13-10-2018 IPR036411 TorD-like superfamily P40_14255 8639bfd020ee7911998f9c06e3d1627e 252 Gene3D G3DSA:1.10.3480.10 5 252 3.4E-8 T 13-10-2018 P40_02075 e59b9161ccb8972627578aeb010fe0c8 135 SUPERFAMILY SSF54593 1 128 5.78E-24 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_02075 e59b9161ccb8972627578aeb010fe0c8 135 Gene3D G3DSA:3.10.180.10 1 135 1.7E-53 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_05645 181d134ccc085b004bf21b576976c5ad 386 Gene3D G3DSA:3.40.640.10 16 260 4.8E-153 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_05645 181d134ccc085b004bf21b576976c5ad 386 Pfam PF00266 Aminotransferase class-V 5 366 3.1E-80 T 13-10-2018 IPR000192 Aminotransferase class V domain P40_05645 181d134ccc085b004bf21b576976c5ad 386 SUPERFAMILY SSF53383 5 379 6.97E-108 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_05645 181d134ccc085b004bf21b576976c5ad 386 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 195 214 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site P40_05645 181d134ccc085b004bf21b576976c5ad 386 PIRSF PIRSF005572 2 382 1.4E-124 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 P40_05645 181d134ccc085b004bf21b576976c5ad 386 Gene3D G3DSA:3.90.1150.10 5 374 4.8E-153 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_03685 2103f25e01ee612ae0124c19cf493c6e 468 Pfam PF00245 Alkaline phosphatase 27 467 4.5E-106 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 P40_03685 2103f25e01ee612ae0124c19cf493c6e 468 Gene3D G3DSA:3.40.720.10 12 468 3.7E-144 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 P40_03685 2103f25e01ee612ae0124c19cf493c6e 468 SUPERFAMILY SSF53649 15 468 2.84E-128 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 P40_03685 2103f25e01ee612ae0124c19cf493c6e 468 SMART SM00098 28 467 1.4E-101 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 P40_03685 2103f25e01ee612ae0124c19cf493c6e 468 PRINTS PR00113 Alkaline phosphatase signature 27 47 4.7E-33 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 P40_03685 2103f25e01ee612ae0124c19cf493c6e 468 PRINTS PR00113 Alkaline phosphatase signature 84 99 4.7E-33 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 P40_03685 2103f25e01ee612ae0124c19cf493c6e 468 PRINTS PR00113 Alkaline phosphatase signature 200 210 4.7E-33 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 P40_03685 2103f25e01ee612ae0124c19cf493c6e 468 PRINTS PR00113 Alkaline phosphatase signature 279 308 4.7E-33 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 P40_06325 a3182b43183cb6b8efd189a1e535c602 202 Pfam PF01810 LysE type translocator 14 193 1.2E-17 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 P40_00140 d1cf8bf3c96f35c2f6eb0513cfc1feab 196 Gene3D G3DSA:3.40.50.10610 39 188 8.2E-36 T 13-10-2018 P40_00140 d1cf8bf3c96f35c2f6eb0513cfc1feab 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 6 187 1.2E-68 T 13-10-2018 IPR014094 Penicillin-binding protein activator LpoB P40_00140 d1cf8bf3c96f35c2f6eb0513cfc1feab 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 6.3E-58 T 13-10-2018 IPR014094 Penicillin-binding protein activator LpoB P40_15520 9f1b73e3496ad52b85b35c1840e1c1a6 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 223 6.9E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_15520 9f1b73e3496ad52b85b35c1840e1c1a6 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 207 6.9E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_15520 9f1b73e3496ad52b85b35c1840e1c1a6 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 223 235 6.9E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_15520 9f1b73e3496ad52b85b35c1840e1c1a6 256 SMART SM00091 13 79 3.6E-11 T 13-10-2018 IPR000014 PAS domain P40_15520 9f1b73e3496ad52b85b35c1840e1c1a6 256 Gene3D G3DSA:3.30.450.20 13 142 1.1E-27 T 13-10-2018 P40_15520 9f1b73e3496ad52b85b35c1840e1c1a6 256 ProSitePatterns PS00622 LuxR-type HTH domain signature. 207 234 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_15520 9f1b73e3496ad52b85b35c1840e1c1a6 256 SMART SM00086 86 127 0.0049 T 13-10-2018 IPR001610 PAC motif P40_15520 9f1b73e3496ad52b85b35c1840e1c1a6 256 Pfam PF00196 Bacterial regulatory proteins, luxR family 194 246 3.6E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_15520 9f1b73e3496ad52b85b35c1840e1c1a6 256 SUPERFAMILY SSF55785 24 136 6.7E-24 T 13-10-2018 IPR035965 PAS domain superfamily P40_15520 9f1b73e3496ad52b85b35c1840e1c1a6 256 Gene3D G3DSA:1.10.10.10 191 254 4.4E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_15520 9f1b73e3496ad52b85b35c1840e1c1a6 256 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 132 1.3E-19 T 13-10-2018 IPR000014 PAS domain P40_15520 9f1b73e3496ad52b85b35c1840e1c1a6 256 Pfam PF13426 PAS domain 25 126 3.9E-14 T 13-10-2018 IPR000014 PAS domain P40_15520 9f1b73e3496ad52b85b35c1840e1c1a6 256 SUPERFAMILY SSF46894 182 253 6.46E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_15520 9f1b73e3496ad52b85b35c1840e1c1a6 256 SMART SM00421 190 247 2.3E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_00700 b943da0aea9d1636f0ee801230c9c5c2 707 Gene3D G3DSA:2.170.130.10 24 157 1.6E-19 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_00700 b943da0aea9d1636f0ee801230c9c5c2 707 Pfam PF00593 TonB dependent receptor 268 705 5.5E-35 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_00700 b943da0aea9d1636f0ee801230c9c5c2 707 SUPERFAMILY SSF56935 28 707 5.27E-94 T 13-10-2018 P40_00700 b943da0aea9d1636f0ee801230c9c5c2 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 150 2.8E-13 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_00700 b943da0aea9d1636f0ee801230c9c5c2 707 Gene3D G3DSA:2.40.170.20 164 707 3.5E-64 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_06585 7ab3c29999f998f3135b5aef9602bea9 118 Gene3D G3DSA:2.30.30.790 6 118 1.6E-18 T 13-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_06585 7ab3c29999f998f3135b5aef9602bea9 118 Pfam PF01245 Ribosomal protein L19 7 116 3.9E-52 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_06585 7ab3c29999f998f3135b5aef9602bea9 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 13-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_06585 7ab3c29999f998f3135b5aef9602bea9 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 7 116 1.7E-51 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_06585 7ab3c29999f998f3135b5aef9602bea9 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 5 117 32.227 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_06585 7ab3c29999f998f3135b5aef9602bea9 118 SUPERFAMILY SSF50104 6 117 2.51E-48 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily P40_06585 7ab3c29999f998f3135b5aef9602bea9 118 PRINTS PR00061 Ribosomal protein L19 signature 91 116 4.4E-42 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_06585 7ab3c29999f998f3135b5aef9602bea9 118 PRINTS PR00061 Ribosomal protein L19 signature 7 36 4.4E-42 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_06585 7ab3c29999f998f3135b5aef9602bea9 118 PRINTS PR00061 Ribosomal protein L19 signature 37 66 4.4E-42 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_06585 7ab3c29999f998f3135b5aef9602bea9 118 PIRSF PIRSF002191 1 118 4.2E-52 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_19785 9d5298798ff96e714b56b27c03b0c9e4 775 Gene3D G3DSA:3.55.50.30 23 95 1.2E-24 T 13-10-2018 P40_19785 9d5298798ff96e714b56b27c03b0c9e4 775 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 234 2.3E-22 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_19785 9d5298798ff96e714b56b27c03b0c9e4 775 Pfam PF07660 Secretin and TonB N terminus short domain 45 96 6.5E-13 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 P40_19785 9d5298798ff96e714b56b27c03b0c9e4 775 SMART SM00965 45 96 3.2E-17 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 P40_19785 9d5298798ff96e714b56b27c03b0c9e4 775 Gene3D G3DSA:2.170.130.10 107 244 3.8E-38 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_19785 9d5298798ff96e714b56b27c03b0c9e4 775 Gene3D G3DSA:2.40.170.20 245 774 2.8E-143 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_19785 9d5298798ff96e714b56b27c03b0c9e4 775 SUPERFAMILY SSF56935 103 773 1.2E-149 T 13-10-2018 P40_19785 9d5298798ff96e714b56b27c03b0c9e4 775 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 131 772 6.4E-139 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 P40_19785 9d5298798ff96e714b56b27c03b0c9e4 775 Pfam PF00593 TonB dependent receptor 331 773 3.3E-66 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_06770 1dde2df9352f56060d339658e32e2a4d 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 2.8E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_06770 1dde2df9352f56060d339658e32e2a4d 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 2.8E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_06770 1dde2df9352f56060d339658e32e2a4d 340 SUPERFAMILY SSF46689 281 329 9.41E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06770 1dde2df9352f56060d339658e32e2a4d 340 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 202 1.1E-48 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_06770 1dde2df9352f56060d339658e32e2a4d 340 SMART SM00342 246 328 1.3E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_06770 1dde2df9352f56060d339658e32e2a4d 340 Pfam PF12833 Helix-turn-helix domain 252 329 1.4E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_06770 1dde2df9352f56060d339658e32e2a4d 340 Gene3D G3DSA:1.10.10.60 224 339 6.9E-28 T 13-10-2018 P40_04220 182711d0428d867fa661bf23631d036e 704 Gene3D G3DSA:2.170.130.10 57 174 9.5E-25 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_04220 182711d0428d867fa661bf23631d036e 704 Pfam PF00593 TonB dependent receptor 373 702 8.7E-38 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_04220 182711d0428d867fa661bf23631d036e 704 Gene3D G3DSA:2.40.170.20 176 704 9.3E-59 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_04220 182711d0428d867fa661bf23631d036e 704 SUPERFAMILY SSF56935 46 704 1.07E-88 T 13-10-2018 P40_04220 182711d0428d867fa661bf23631d036e 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 164 8.3E-17 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_08470 f3de6223972a14f8aecb30aa9023d82e 411 Gene3D G3DSA:3.20.20.70 3 355 1.5E-114 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_08470 f3de6223972a14f8aecb30aa9023d82e 411 SUPERFAMILY SSF51395 5 345 5.04E-101 T 13-10-2018 P40_08470 f3de6223972a14f8aecb30aa9023d82e 411 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 343 2.3E-53 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 P40_13175 2008b66e43b8c861c8ed835e25d95064 352 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 10 341 33.579 T 13-10-2018 IPR003770 Endolytic murein transglycosylase P40_13175 2008b66e43b8c861c8ed835e25d95064 352 Gene3D G3DSA:3.30.160.60 310 344 1.7E-12 T 13-10-2018 P40_13175 2008b66e43b8c861c8ed835e25d95064 352 Pfam PF02618 YceG-like family 42 334 6.9E-78 T 13-10-2018 IPR003770 Endolytic murein transglycosylase P40_13175 2008b66e43b8c861c8ed835e25d95064 352 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 7 337 1.1E-81 T 13-10-2018 IPR003770 Endolytic murein transglycosylase P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Gene3D G3DSA:3.90.930.1 1100 1257 7.2E-9 T 13-10-2018 P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Gene3D G3DSA:2.180.10.10 1952 2213 8.3E-35 T 13-10-2018 P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Gene3D G3DSA:2.180.10.10 1582 1778 1.1E-7 T 13-10-2018 P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Gene3D G3DSA:2.180.10.10 1815 1951 2.9E-17 T 13-10-2018 P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 SUPERFAMILY SSF54001 72 243 2.45E-11 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1304 1340 0.0034 T 13-10-2018 IPR006530 YD repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1470 1500 7.1E-5 T 13-10-2018 IPR006530 YD repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1571 1610 0.0021 T 13-10-2018 IPR006530 YD repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1667 1707 2.8E-9 T 13-10-2018 IPR006530 YD repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1692 1721 2.0E-5 T 13-10-2018 IPR006530 YD repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1613 1646 5.5E-5 T 13-10-2018 IPR006530 YD repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1529 1568 1.3E-9 T 13-10-2018 IPR006530 YD repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1826 1856 8.8E-4 T 13-10-2018 IPR006530 YD repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1159 1187 3.1E-5 T 13-10-2018 IPR006530 YD repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Pfam PF01841 Transglutaminase-like superfamily 68 220 3.7E-12 T 13-10-2018 IPR002931 Transglutaminase-like P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Gene3D G3DSA:3.10.620.30 60 226 1.8E-9 T 13-10-2018 P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2137 2213 8.1E-26 T 13-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Pfam PF05593 RHS Repeat 1137 1174 8.6E-7 T 13-10-2018 IPR031325 RHS repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Pfam PF05593 RHS Repeat 1613 1647 1.1E-5 T 13-10-2018 IPR031325 RHS repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Pfam PF05593 RHS Repeat 1592 1628 1.2E-4 T 13-10-2018 IPR031325 RHS repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Pfam PF05593 RHS Repeat 1826 1861 1.6E-8 T 13-10-2018 IPR031325 RHS repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Pfam PF05593 RHS Repeat 1159 1196 1.0E-5 T 13-10-2018 IPR031325 RHS repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Pfam PF05593 RHS Repeat 1688 1721 1.8E-8 T 13-10-2018 IPR031325 RHS repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Pfam PF05593 RHS Repeat 1529 1566 8.0E-12 T 13-10-2018 IPR031325 RHS repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Pfam PF05593 RHS Repeat 1667 1703 9.6E-7 T 13-10-2018 IPR031325 RHS repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Pfam PF05593 RHS Repeat 1558 1585 9.0E-6 T 13-10-2018 IPR031325 RHS repeat P40_09995 52bdb6ff0423105fc5010270e661eaba 2437 Gene3D G3DSA:3.90.930.1 1464 1581 1.2E-6 T 13-10-2018 P40_11380 a28915c4f7c30649764f5d5e0488a480 257 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 170 256 7.6E-24 T 13-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 P40_11380 a28915c4f7c30649764f5d5e0488a480 257 PIRSF PIRSF005457 1 257 4.3E-98 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 P40_11380 a28915c4f7c30649764f5d5e0488a480 257 SUPERFAMILY SSF56281 7 257 1.13E-69 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_11380 a28915c4f7c30649764f5d5e0488a480 257 Gene3D G3DSA:3.60.15.10 3 257 4.1E-87 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_11380 a28915c4f7c30649764f5d5e0488a480 257 SMART SM00849 13 169 3.5E-36 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_11380 a28915c4f7c30649764f5d5e0488a480 257 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 7 256 3.1E-104 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 P40_11380 a28915c4f7c30649764f5d5e0488a480 257 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 3 257 43.208 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 P40_11380 a28915c4f7c30649764f5d5e0488a480 257 Pfam PF00753 Metallo-beta-lactamase superfamily 15 169 6.3E-19 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_05890 5dc5919a1cd9217e8e3602a7a71afca6 84 Gene3D G3DSA:1.10.8.1250 12 84 8.9E-15 T 13-10-2018 IPR038296 Antitoxin ParD superfamily P40_05890 5dc5919a1cd9217e8e3602a7a71afca6 84 SUPERFAMILY SSF47598 1 46 1.89E-8 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 P40_05890 5dc5919a1cd9217e8e3602a7a71afca6 84 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 71 1.5E-10 T 13-10-2018 IPR022789 Antitoxin ParD P40_05890 5dc5919a1cd9217e8e3602a7a71afca6 84 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 7 68 4.9E-18 T 13-10-2018 IPR022789 Antitoxin ParD P40_06840 382cbbbd3529f4d90b681d5523aca4d4 314 Pfam PF01548 Transposase 10 149 4.2E-21 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_06840 382cbbbd3529f4d90b681d5523aca4d4 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 193 274 7.2E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_13020 678c4e98ee5c4371e036e59bd2ee6495 329 Gene3D G3DSA:3.20.20.140 12 324 2.8E-35 T 13-10-2018 P40_13020 678c4e98ee5c4371e036e59bd2ee6495 329 Pfam PF04909 Amidohydrolase 86 321 5.4E-16 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P40_13020 678c4e98ee5c4371e036e59bd2ee6495 329 SUPERFAMILY SSF51556 19 320 6.5E-26 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_19760 2491ad1706a0ddf6946bb7a363c26811 355 Pfam PF12833 Helix-turn-helix domain 267 341 5.2E-13 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_19760 2491ad1706a0ddf6946bb7a363c26811 355 SMART SM00342 260 342 3.2E-15 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_19760 2491ad1706a0ddf6946bb7a363c26811 355 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 35 216 1.5E-31 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_19760 2491ad1706a0ddf6946bb7a363c26811 355 Gene3D G3DSA:1.10.10.60 241 349 3.5E-20 T 13-10-2018 P40_19760 2491ad1706a0ddf6946bb7a363c26811 355 SUPERFAMILY SSF46689 296 343 1.7E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_02275 87813e4813e6768c2d980bbc6e956452 259 Gene3D G3DSA:3.90.226.10 1 199 3.4E-59 T 13-10-2018 P40_02275 87813e4813e6768c2d980bbc6e956452 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 258 2.5E-54 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_02275 87813e4813e6768c2d980bbc6e956452 259 Gene3D G3DSA:1.10.12.10 200 259 4.0E-15 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_02275 87813e4813e6768c2d980bbc6e956452 259 SUPERFAMILY SSF52096 3 259 3.22E-76 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_16070 93ffd83dfa087c184c076735daa9ee82 171 SUPERFAMILY SSF101801 86 169 1.09E-27 T 13-10-2018 IPR036429 SpoA-like superfamily P40_16070 93ffd83dfa087c184c076735daa9ee82 171 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 90 160 6.6E-27 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) P40_16070 93ffd83dfa087c184c076735daa9ee82 171 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 106 3.0E-30 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 P40_16070 93ffd83dfa087c184c076735daa9ee82 171 PRINTS PR00956 Flagellar motor switch protein FliN signature 107 123 3.0E-30 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 P40_16070 93ffd83dfa087c184c076735daa9ee82 171 PRINTS PR00956 Flagellar motor switch protein FliN signature 123 136 3.0E-30 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 P40_16070 93ffd83dfa087c184c076735daa9ee82 171 PRINTS PR00956 Flagellar motor switch protein FliN signature 136 151 3.0E-30 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 P40_16070 93ffd83dfa087c184c076735daa9ee82 171 Gene3D G3DSA:2.30.330.10 82 171 2.4E-36 T 13-10-2018 IPR036429 SpoA-like superfamily P40_16070 93ffd83dfa087c184c076735daa9ee82 171 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 88 162 1.1E-33 T 13-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 P40_19565 af263877f7ef9074d529e3e62c432818 292 Gene3D G3DSA:3.10.310.10 122 272 6.5E-99 T 13-10-2018 P40_19565 af263877f7ef9074d529e3e62c432818 292 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 283 1.1E-92 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 P40_19565 af263877f7ef9074d529e3e62c432818 292 Gene3D G3DSA:3.10.310.10 5 281 6.5E-99 T 13-10-2018 P40_19565 af263877f7ef9074d529e3e62c432818 292 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 71 85 - T 13-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 P40_19565 af263877f7ef9074d529e3e62c432818 292 Pfam PF01678 Diaminopimelate epimerase 5 130 1.2E-33 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 P40_19565 af263877f7ef9074d529e3e62c432818 292 Pfam PF01678 Diaminopimelate epimerase 159 278 7.3E-28 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 P40_19565 af263877f7ef9074d529e3e62c432818 292 SUPERFAMILY SSF54506 2 286 1.13E-49 T 13-10-2018 P40_19565 af263877f7ef9074d529e3e62c432818 292 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 285 38.873 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 P40_02990 ac62e980d9cbac22a42c4598cfa8ed0c 307 Gene3D G3DSA:3.20.10.10 132 307 1.2E-54 T 13-10-2018 P40_02990 ac62e980d9cbac22a42c4598cfa8ed0c 307 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 P40_02990 ac62e980d9cbac22a42c4598cfa8ed0c 307 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 304 2.4E-135 T 13-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 P40_02990 ac62e980d9cbac22a42c4598cfa8ed0c 307 Gene3D G3DSA:3.30.470.10 2 131 9.0E-41 T 13-10-2018 P40_02990 ac62e980d9cbac22a42c4598cfa8ed0c 307 SUPERFAMILY SSF56752 1 303 9.55E-105 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 P40_02990 ac62e980d9cbac22a42c4598cfa8ed0c 307 Pfam PF01063 Amino-transferase class IV 36 266 2.3E-53 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 P40_11965 572d40a859a1b6839e19bb2533b95ee7 146 Pfam PF05099 Tellurite resistance protein TerB 11 140 2.6E-38 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal P40_11965 572d40a859a1b6839e19bb2533b95ee7 146 Gene3D G3DSA:1.10.3680.10 8 136 5.5E-21 T 13-10-2018 IPR029024 TerB-like P40_11965 572d40a859a1b6839e19bb2533b95ee7 146 SUPERFAMILY SSF158682 3 143 6.15E-29 T 13-10-2018 IPR029024 TerB-like P40_04770 bc346e557746d0fdc1021197d31fd6a4 347 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 64 1.4E-17 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 P40_04770 bc346e557746d0fdc1021197d31fd6a4 347 Gene3D G3DSA:1.20.970.10 1 70 4.2E-29 T 13-10-2018 P40_04770 bc346e557746d0fdc1021197d31fd6a4 347 Gene3D G3DSA:3.40.1030.10 71 346 8.2E-105 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 P40_04770 bc346e557746d0fdc1021197d31fd6a4 347 SUPERFAMILY SSF47648 1 69 8.5E-20 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 P40_04770 bc346e557746d0fdc1021197d31fd6a4 347 Pfam PF00591 Glycosyl transferase family, a/b domain 76 329 1.9E-98 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 P40_04770 bc346e557746d0fdc1021197d31fd6a4 347 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 339 38.009 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 P40_04770 bc346e557746d0fdc1021197d31fd6a4 347 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 338 2.1E-119 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 P40_04770 bc346e557746d0fdc1021197d31fd6a4 347 SUPERFAMILY SSF52418 75 339 1.57E-88 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 P40_13345 f56c918e2f20a54c576aa2cb102778a2 423 Gene3D G3DSA:1.20.1250.20 216 407 1.6E-8 T 13-10-2018 P40_13345 f56c918e2f20a54c576aa2cb102778a2 423 Gene3D G3DSA:1.20.1250.20 9 207 3.3E-10 T 13-10-2018 P40_13345 f56c918e2f20a54c576aa2cb102778a2 423 Pfam PF13000 Acetyl-coenzyme A transporter 1 16 171 5.0E-16 T 13-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 P40_13345 f56c918e2f20a54c576aa2cb102778a2 423 SUPERFAMILY SSF103473 12 407 3.01E-29 T 13-10-2018 IPR036259 MFS transporter superfamily P40_16140 885fe7506c1a0f696c3c01a66bc73f0d 132 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 84 127 8.6E-14 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain P40_16140 885fe7506c1a0f696c3c01a66bc73f0d 132 Pfam PF00460 Flagella basal body rod protein 6 34 5.8E-9 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 P40_16140 885fe7506c1a0f696c3c01a66bc73f0d 132 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site P40_16140 885fe7506c1a0f696c3c01a66bc73f0d 132 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 2 130 7.2E-52 T 13-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 P40_18615 3ed73e279f127219f5048dbc782206d7 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 7.5E-81 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_18615 3ed73e279f127219f5048dbc782206d7 428 PIRSF PIRSF006066 1 428 3.7E-88 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_18615 3ed73e279f127219f5048dbc782206d7 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 424 8.8E-90 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_15970 0abdb260462d423be8f29a09ee4acce1 190 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 172 3.1E-85 T 13-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 P40_15970 0abdb260462d423be8f29a09ee4acce1 190 SUPERFAMILY SSF160930 5 160 2.75E-61 T 13-10-2018 P40_15970 0abdb260462d423be8f29a09ee4acce1 190 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 182 44.603 T 13-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 P40_15970 0abdb260462d423be8f29a09ee4acce1 190 PIRSF PIRSF003159 1 179 1.1E-88 T 13-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 P40_15970 0abdb260462d423be8f29a09ee4acce1 190 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 172 2.0E-79 T 13-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 P40_13110 c6ba0f0ad195dff051d41b4d1f9a8381 278 SUPERFAMILY SSF81324 24 236 3.01E-53 T 13-10-2018 P40_13110 c6ba0f0ad195dff051d41b4d1f9a8381 278 PRINTS PR00169 Potassium channel signature 209 235 5.8E-37 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 P40_13110 c6ba0f0ad195dff051d41b4d1f9a8381 278 PRINTS PR00169 Potassium channel signature 60 83 5.8E-37 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 P40_13110 c6ba0f0ad195dff051d41b4d1f9a8381 278 PRINTS PR00169 Potassium channel signature 180 202 5.8E-37 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 P40_13110 c6ba0f0ad195dff051d41b4d1f9a8381 278 PRINTS PR00169 Potassium channel signature 18 46 5.8E-37 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 P40_13110 c6ba0f0ad195dff051d41b4d1f9a8381 278 PRINTS PR00169 Potassium channel signature 86 106 5.8E-37 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 P40_13110 c6ba0f0ad195dff051d41b4d1f9a8381 278 PRINTS PR00169 Potassium channel signature 151 174 5.8E-37 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 P40_13110 c6ba0f0ad195dff051d41b4d1f9a8381 278 PRINTS PR00169 Potassium channel signature 122 148 5.8E-37 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 P40_13110 c6ba0f0ad195dff051d41b4d1f9a8381 278 Gene3D G3DSA:1.10.287.70 25 238 8.9E-58 T 13-10-2018 P40_13110 c6ba0f0ad195dff051d41b4d1f9a8381 278 Pfam PF00520 Ion transport protein 26 237 9.5E-31 T 13-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 P40_02555 cc572e7f685177d7c4fb852ba7bd6cc6 307 Pfam PF12697 Alpha/beta hydrolase family 32 260 1.3E-12 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_02555 cc572e7f685177d7c4fb852ba7bd6cc6 307 Gene3D G3DSA:1.10.10.800 139 223 3.5E-38 T 13-10-2018 P40_02555 cc572e7f685177d7c4fb852ba7bd6cc6 307 SUPERFAMILY SSF53474 4 298 8.86E-46 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_02555 cc572e7f685177d7c4fb852ba7bd6cc6 307 Gene3D G3DSA:3.40.50.1820 12 275 3.5E-38 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_21690 2dc4837271e20760e414be387bb86e14 579 Pfam PF02096 60Kd inner membrane protein 396 574 2.7E-60 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P40_21690 2dc4837271e20760e414be387bb86e14 579 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 395 574 1.9E-70 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_21690 2dc4837271e20760e414be387bb86e14 579 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 576 23.726 T 13-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 P40_21690 2dc4837271e20760e414be387bb86e14 579 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 5 377 3.5E-104 T 13-10-2018 IPR028053 Membrane insertase YidC, N-terminal P40_21690 2dc4837271e20760e414be387bb86e14 579 Gene3D G3DSA:2.70.98.90 88 361 2.8E-97 T 13-10-2018 IPR038221 YidC, periplasmic domain superfamily P40_21690 2dc4837271e20760e414be387bb86e14 579 PRINTS PR00701 60kDa inner membrane protein signature 2 23 3.2E-68 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P40_21690 2dc4837271e20760e414be387bb86e14 579 PRINTS PR00701 60kDa inner membrane protein signature 504 526 3.2E-68 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P40_21690 2dc4837271e20760e414be387bb86e14 579 PRINTS PR00701 60kDa inner membrane protein signature 278 293 3.2E-68 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P40_21690 2dc4837271e20760e414be387bb86e14 579 PRINTS PR00701 60kDa inner membrane protein signature 187 207 3.2E-68 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P40_21690 2dc4837271e20760e414be387bb86e14 579 PRINTS PR00701 60kDa inner membrane protein signature 245 263 3.2E-68 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P40_21690 2dc4837271e20760e414be387bb86e14 579 PRINTS PR00701 60kDa inner membrane protein signature 457 480 3.2E-68 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P40_21690 2dc4837271e20760e414be387bb86e14 579 PRINTS PR00701 60kDa inner membrane protein signature 540 563 3.2E-68 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P40_21690 2dc4837271e20760e414be387bb86e14 579 Pfam PF14849 YidC periplasmic domain 92 370 7.3E-86 T 13-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain P40_21690 2dc4837271e20760e414be387bb86e14 579 PRINTS PR01900 YidC translocation/secretion protein signature 381 397 5.6E-20 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P40_21690 2dc4837271e20760e414be387bb86e14 579 PRINTS PR01900 YidC translocation/secretion protein signature 529 553 5.6E-20 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P40_21690 2dc4837271e20760e414be387bb86e14 579 PRINTS PR01900 YidC translocation/secretion protein signature 510 525 5.6E-20 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P40_00445 ef02c79779d5dc8b6fa704fe91bb75b7 344 Gene3D G3DSA:3.30.450.90 1 100 3.6E-36 T 13-10-2018 P40_00445 ef02c79779d5dc8b6fa704fe91bb75b7 344 Pfam PF00437 Type II/IV secretion system protein 11 267 7.8E-46 T 13-10-2018 IPR001482 Type II/IV secretion system protein P40_00445 ef02c79779d5dc8b6fa704fe91bb75b7 344 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 2.7E-154 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 P40_00445 ef02c79779d5dc8b6fa704fe91bb75b7 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 13-10-2018 IPR001482 Type II/IV secretion system protein P40_00445 ef02c79779d5dc8b6fa704fe91bb75b7 344 SMART SM00382 122 256 7.8E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_00445 ef02c79779d5dc8b6fa704fe91bb75b7 344 Gene3D G3DSA:3.40.50.300 101 344 1.6E-108 T 13-10-2018 P40_00445 ef02c79779d5dc8b6fa704fe91bb75b7 344 SUPERFAMILY SSF52540 5 335 1.28E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_06470 ad821fce0e20a3dc482bf45ac5f08e63 139 SUPERFAMILY SSF54637 17 134 2.16E-33 T 13-10-2018 IPR029069 HotDog domain superfamily P40_06470 ad821fce0e20a3dc482bf45ac5f08e63 139 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 135 7.6E-23 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 P40_06470 ad821fce0e20a3dc482bf45ac5f08e63 139 Gene3D G3DSA:3.10.129.10 2 139 1.6E-39 T 13-10-2018 P40_06470 ad821fce0e20a3dc482bf45ac5f08e63 139 Pfam PF03061 Thioesterase superfamily 50 127 1.3E-13 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_12545 1442fc0b56ee95be1a2e2f88eb926be5 220 Pfam PF00581 Rhodanese-like domain 124 213 1.5E-13 T 13-10-2018 IPR001763 Rhodanese-like domain P40_12545 1442fc0b56ee95be1a2e2f88eb926be5 220 Gene3D G3DSA:3.40.250.10 116 219 1.3E-27 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_12545 1442fc0b56ee95be1a2e2f88eb926be5 220 SUPERFAMILY SSF46785 13 180 2.73E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_12545 1442fc0b56ee95be1a2e2f88eb926be5 220 Pfam PF12840 Helix-turn-helix domain 14 72 1.2E-10 T 13-10-2018 P40_12545 1442fc0b56ee95be1a2e2f88eb926be5 220 Gene3D G3DSA:1.10.10.10 3 104 5.7E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_12545 1442fc0b56ee95be1a2e2f88eb926be5 220 SUPERFAMILY SSF52821 117 220 3.8E-30 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_12545 1442fc0b56ee95be1a2e2f88eb926be5 220 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 1.8E-7 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_12545 1442fc0b56ee95be1a2e2f88eb926be5 220 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 1.8E-7 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_12545 1442fc0b56ee95be1a2e2f88eb926be5 220 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 1.8E-7 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_12545 1442fc0b56ee95be1a2e2f88eb926be5 220 SMART SM00418 14 92 1.2E-24 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_12545 1442fc0b56ee95be1a2e2f88eb926be5 220 SMART SM00450 121 217 1.6E-24 T 13-10-2018 IPR001763 Rhodanese-like domain P40_04895 f78c55ca3c3dc3f9b1065b484f5f061d 343 Pfam PF12833 Helix-turn-helix domain 263 340 1.4E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_04895 f78c55ca3c3dc3f9b1065b484f5f061d 343 Gene3D G3DSA:1.10.10.60 238 343 4.4E-24 T 13-10-2018 P40_04895 f78c55ca3c3dc3f9b1065b484f5f061d 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 323 339 5.7E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_04895 f78c55ca3c3dc3f9b1065b484f5f061d 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 308 323 5.7E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_04895 f78c55ca3c3dc3f9b1065b484f5f061d 343 SUPERFAMILY SSF46689 295 341 4.08E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_04895 f78c55ca3c3dc3f9b1065b484f5f061d 343 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 209 1.0E-29 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_04895 f78c55ca3c3dc3f9b1065b484f5f061d 343 SMART SM00342 256 339 3.0E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_18930 9ee78c2f7f125bf9c253e077a46b6492 389 ProSitePatterns PS00571 Amidases signature. 106 137 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 P40_18930 9ee78c2f7f125bf9c253e077a46b6492 389 SUPERFAMILY SSF75304 11 387 1.44E-85 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_18930 9ee78c2f7f125bf9c253e077a46b6492 389 Gene3D G3DSA:3.90.1300.10 14 387 4.6E-90 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_18930 9ee78c2f7f125bf9c253e077a46b6492 389 Pfam PF01425 Amidase 20 183 4.9E-49 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_18930 9ee78c2f7f125bf9c253e077a46b6492 389 Pfam PF01425 Amidase 262 377 1.3E-9 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_11310 874056bc06af08b07f1ce6395b8335af 271 SUPERFAMILY SSF54637 153 264 2.83E-9 T 13-10-2018 IPR029069 HotDog domain superfamily P40_11310 874056bc06af08b07f1ce6395b8335af 271 SUPERFAMILY SSF54637 25 103 1.15E-9 T 13-10-2018 IPR029069 HotDog domain superfamily P40_11310 874056bc06af08b07f1ce6395b8335af 271 Gene3D G3DSA:3.10.129.90 9 263 8.9E-19 T 13-10-2018 P40_11310 874056bc06af08b07f1ce6395b8335af 271 Pfam PF13622 Thioesterase-like superfamily 21 264 1.7E-30 T 13-10-2018 P40_11990 bb9b64016759f6799a619bfb383ef9cf 256 Gene3D G3DSA:3.40.50.720 1 248 1.5E-60 T 13-10-2018 P40_11990 bb9b64016759f6799a619bfb383ef9cf 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_11990 bb9b64016759f6799a619bfb383ef9cf 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 5.4E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11990 bb9b64016759f6799a619bfb383ef9cf 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 5.4E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11990 bb9b64016759f6799a619bfb383ef9cf 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 5.4E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11990 bb9b64016759f6799a619bfb383ef9cf 256 Pfam PF00106 short chain dehydrogenase 7 192 4.0E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11990 bb9b64016759f6799a619bfb383ef9cf 256 SUPERFAMILY SSF51735 1 245 1.95E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_11990 bb9b64016759f6799a619bfb383ef9cf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.1E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11990 bb9b64016759f6799a619bfb383ef9cf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11990 bb9b64016759f6799a619bfb383ef9cf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.1E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11990 bb9b64016759f6799a619bfb383ef9cf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.1E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11990 bb9b64016759f6799a619bfb383ef9cf 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.1E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_01460 a2db1e432815a0e62570d7cd46739750 355 Gene3D G3DSA:3.90.180.10 10 331 4.2E-92 T 13-10-2018 P40_01460 a2db1e432815a0e62570d7cd46739750 355 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 143 3.0E-22 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P40_01460 a2db1e432815a0e62570d7cd46739750 355 Gene3D G3DSA:3.40.50.720 161 297 4.2E-92 T 13-10-2018 P40_01460 a2db1e432815a0e62570d7cd46739750 355 Pfam PF00107 Zinc-binding dehydrogenase 184 311 4.0E-26 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 P40_01460 a2db1e432815a0e62570d7cd46739750 355 SUPERFAMILY SSF50129 1 181 2.59E-41 T 13-10-2018 IPR011032 GroES-like superfamily P40_01460 a2db1e432815a0e62570d7cd46739750 355 SUPERFAMILY SSF51735 147 316 8.58E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_01460 a2db1e432815a0e62570d7cd46739750 355 SMART SM00829 10 350 2.7E-4 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P40_01460 a2db1e432815a0e62570d7cd46739750 355 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 70 84 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 P40_18965 aab05a94825574a2f31b0e12c9b673a1 275 SUPERFAMILY SSF52540 20 245 2.6E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18965 aab05a94825574a2f31b0e12c9b673a1 275 Pfam PF00005 ABC transporter 36 178 3.3E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_18965 aab05a94825574a2f31b0e12c9b673a1 275 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_18965 aab05a94825574a2f31b0e12c9b673a1 275 SMART SM00382 45 238 2.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_18965 aab05a94825574a2f31b0e12c9b673a1 275 Gene3D G3DSA:3.40.50.300 18 272 4.7E-60 T 13-10-2018 P40_10550 7a2a36c2406105575d3f4a45031ba1f5 171 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 163 2.4E-62 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 P40_10550 7a2a36c2406105575d3f4a45031ba1f5 171 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 164 3.5E-61 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 P40_10550 7a2a36c2406105575d3f4a45031ba1f5 171 PIRSF PIRSF028301 2 171 1.1E-67 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 P40_15545 8e0a6b1c3571e8e4c4fce365b2c97a4c 199 Pfam PF03358 NADPH-dependent FMN reductase 16 141 4.4E-13 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 P40_15545 8e0a6b1c3571e8e4c4fce365b2c97a4c 199 Gene3D G3DSA:3.40.50.360 1 199 2.1E-74 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_15545 8e0a6b1c3571e8e4c4fce365b2c97a4c 199 SUPERFAMILY SSF52218 1 199 1.17E-59 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_15545 8e0a6b1c3571e8e4c4fce365b2c97a4c 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 199 5.1E-92 T 13-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 P40_15545 8e0a6b1c3571e8e4c4fce365b2c97a4c 199 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 199 40.948 T 13-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 P40_18975 70c4006465ffbe2473db77544bb1b7ec 141 Gene3D G3DSA:2.60.120.10 19 118 6.5E-19 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_18975 70c4006465ffbe2473db77544bb1b7ec 141 Pfam PF07883 Cupin domain 42 108 4.4E-17 T 13-10-2018 IPR013096 Cupin 2, conserved barrel P40_18975 70c4006465ffbe2473db77544bb1b7ec 141 SUPERFAMILY SSF51182 9 113 1.7E-24 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_08290 eed3bd4aba90dfa7e872fbd1152daba1 554 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 532 3.8E-13 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_08290 eed3bd4aba90dfa7e872fbd1152daba1 554 Gene3D G3DSA:3.40.50.12780 5 439 1.6E-95 T 13-10-2018 P40_08290 eed3bd4aba90dfa7e872fbd1152daba1 554 Pfam PF00501 AMP-binding enzyme 18 446 4.6E-84 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_08290 eed3bd4aba90dfa7e872fbd1152daba1 554 Gene3D G3DSA:3.30.300.30 440 546 1.8E-25 T 13-10-2018 P40_08290 eed3bd4aba90dfa7e872fbd1152daba1 554 SUPERFAMILY SSF56801 7 544 8.9E-136 T 13-10-2018 P40_18980 018a62ba8696a9c629ffb826ecf4fd05 264 Pfam PF00857 Isochorismatase family 55 248 2.2E-39 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 P40_18980 018a62ba8696a9c629ffb826ecf4fd05 264 SUPERFAMILY SSF52499 38 260 6.93E-47 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_18980 018a62ba8696a9c629ffb826ecf4fd05 264 Gene3D G3DSA:3.40.50.850 36 264 1.4E-53 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_06720 550c72458d53319a938ddb0c968cd2d5 197 Gene3D G3DSA:3.40.50.300 8 135 1.8E-6 T 13-10-2018 P40_06720 550c72458d53319a938ddb0c968cd2d5 197 SUPERFAMILY SSF52540 6 177 1.83E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_06720 550c72458d53319a938ddb0c968cd2d5 197 Pfam PF13521 AAA domain 12 175 3.9E-38 T 13-10-2018 IPR038727 NadR/Ttd14, AAA domain P40_00335 e68b92f0499a0b0bfe96612adb484820 672 SUPERFAMILY SSF58104 370 670 9.29E-68 T 13-10-2018 P40_00335 e68b92f0499a0b0bfe96612adb484820 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 429 458 3.3E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_00335 e68b92f0499a0b0bfe96612adb484820 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 506 533 3.3E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_00335 e68b92f0499a0b0bfe96612adb484820 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 535 564 3.3E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 P40_00335 e68b92f0499a0b0bfe96612adb484820 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 454 637 2.4E-42 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_00335 e68b92f0499a0b0bfe96612adb484820 672 SMART SM00283 408 669 2.1E-94 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 P40_00335 e68b92f0499a0b0bfe96612adb484820 672 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 49 142 1.3E-6 T 13-10-2018 IPR029095 NarX-like, N-terminal P40_00335 e68b92f0499a0b0bfe96612adb484820 672 Gene3D G3DSA:1.10.287.950 345 671 1.4E-66 T 13-10-2018 P40_02535 e37ff77df1880cb3463d8820552a3f89 479 Gene3D G3DSA:1.10.10.10 2 80 8.0E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_02535 e37ff77df1880cb3463d8820552a3f89 479 SMART SM00345 11 70 4.9E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_02535 e37ff77df1880cb3463d8820552a3f89 479 Pfam PF00155 Aminotransferase class I and II 125 450 1.0E-30 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_02535 e37ff77df1880cb3463d8820552a3f89 479 SUPERFAMILY SSF53383 93 470 1.77E-86 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_02535 e37ff77df1880cb3463d8820552a3f89 479 SUPERFAMILY SSF46785 6 74 4.31E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_02535 e37ff77df1880cb3463d8820552a3f89 479 Gene3D G3DSA:3.40.640.10 146 363 1.8E-94 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_02535 e37ff77df1880cb3463d8820552a3f89 479 Gene3D G3DSA:3.90.1150.10 103 468 1.8E-94 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_02535 e37ff77df1880cb3463d8820552a3f89 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 70 7.0E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_13810 6562b0caf10bbedafc7e54b1fb4a22ca 223 Pfam PF02224 Cytidylate kinase 5 217 5.6E-73 T 13-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 P40_13810 6562b0caf10bbedafc7e54b1fb4a22ca 223 Gene3D G3DSA:3.40.50.300 1 222 6.3E-80 T 13-10-2018 P40_13810 6562b0caf10bbedafc7e54b1fb4a22ca 223 TIGRFAM TIGR00017 cmk: cytidylate kinase 2 216 2.2E-79 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 P40_13810 6562b0caf10bbedafc7e54b1fb4a22ca 223 SUPERFAMILY SSF52540 3 216 2.67E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_13810 6562b0caf10bbedafc7e54b1fb4a22ca 223 Hamap MF_00238 Cytidylate kinase [cmk]. 3 221 32.81 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 P40_05500 5ee50a7470f77bcba6cee9b36ec9142d 278 Gene3D G3DSA:3.40.50.300 10 256 3.4E-56 T 13-10-2018 P40_05500 5ee50a7470f77bcba6cee9b36ec9142d 278 Pfam PF00005 ABC transporter 31 182 1.6E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_05500 5ee50a7470f77bcba6cee9b36ec9142d 278 SMART SM00382 40 234 1.9E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_05500 5ee50a7470f77bcba6cee9b36ec9142d 278 SUPERFAMILY SSF52540 13 254 4.87E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_02745 5fffb5d33e1d225c87170d3820524652 137 Gene3D G3DSA:3.30.160.20 1 137 1.6E-40 T 13-10-2018 P40_02745 5fffb5d33e1d225c87170d3820524652 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 P40_02745 5fffb5d33e1d225c87170d3820524652 137 SUPERFAMILY SSF75620 7 114 4.32E-13 T 13-10-2018 P40_02745 5fffb5d33e1d225c87170d3820524652 137 Pfam PF00472 RF-1 domain 7 130 3.6E-25 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 P40_09270 8255ecc9ba66cd0c80ec83e3766ea229 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 4 158 1.2E-67 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 P40_09270 8255ecc9ba66cd0c80ec83e3766ea229 160 Pfam PF02542 YgbB family 4 158 3.5E-64 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 P40_09270 8255ecc9ba66cd0c80ec83e3766ea229 160 Gene3D G3DSA:3.30.1330.50 1 160 9.3E-69 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 P40_09270 8255ecc9ba66cd0c80ec83e3766ea229 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 38 53 - T 13-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 P40_09270 8255ecc9ba66cd0c80ec83e3766ea229 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 3 159 35.946 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 P40_09270 8255ecc9ba66cd0c80ec83e3766ea229 160 SUPERFAMILY SSF69765 2 159 7.85E-64 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 P40_10175 ccc9c398d88e22c5806aaf1a9e8c4c89 114 Pfam PF11190 Protein of unknown function (DUF2976) 28 113 3.5E-32 T 13-10-2018 IPR021356 Integrating conjugative element protein PFL4702 P40_10175 ccc9c398d88e22c5806aaf1a9e8c4c89 114 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 14 114 1.8E-34 T 13-10-2018 IPR021356 Integrating conjugative element protein PFL4702 P40_14295 4051127f71482312cd94615cce9d8bf8 146 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 47 65 - T 13-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site P40_14295 4051127f71482312cd94615cce9d8bf8 146 Gene3D G3DSA:1.10.10.10 1 139 6.7E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14295 4051127f71482312cd94615cce9d8bf8 146 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 8.4E-34 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type P40_14295 4051127f71482312cd94615cce9d8bf8 146 Pfam PF02082 Transcriptional regulator 1 79 7.0E-24 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type P40_14295 4051127f71482312cd94615cce9d8bf8 146 SUPERFAMILY SSF46785 2 131 1.03E-34 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_20185 baa14650b8480da4a1af08a544edd04e 226 Pfam PF00072 Response regulator receiver domain 3 114 7.7E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_20185 baa14650b8480da4a1af08a544edd04e 226 SUPERFAMILY SSF52172 2 168 4.84E-43 T 13-10-2018 IPR011006 CheY-like superfamily P40_20185 baa14650b8480da4a1af08a544edd04e 226 Gene3D G3DSA:1.10.10.10 121 225 6.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_20185 baa14650b8480da4a1af08a544edd04e 226 SMART SM00862 146 220 1.2E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_20185 baa14650b8480da4a1af08a544edd04e 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 8.7E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_20185 baa14650b8480da4a1af08a544edd04e 226 SMART SM00448 1 113 2.5E-44 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_20185 baa14650b8480da4a1af08a544edd04e 226 Gene3D G3DSA:3.40.50.2300 1 120 5.3E-40 T 13-10-2018 P40_09700 558c839941570ef3fc1add9423275356 210 Pfam PF01810 LysE type translocator 16 204 1.1E-30 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 P40_09700 558c839941570ef3fc1add9423275356 210 PIRSF PIRSF006324 1 207 7.7E-51 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 P40_01805 18cc932c4d5d0b2d73cf9cbdd7e06e64 317 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 38 55 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 P40_01805 18cc932c4d5d0b2d73cf9cbdd7e06e64 317 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 143 160 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 P40_01805 18cc932c4d5d0b2d73cf9cbdd7e06e64 317 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 259 274 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 P40_01805 18cc932c4d5d0b2d73cf9cbdd7e06e64 317 PRINTS PR00069 Aldo-keto reductase signature 177 206 1.5E-57 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_01805 18cc932c4d5d0b2d73cf9cbdd7e06e64 317 PRINTS PR00069 Aldo-keto reductase signature 94 112 1.5E-57 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_01805 18cc932c4d5d0b2d73cf9cbdd7e06e64 317 PRINTS PR00069 Aldo-keto reductase signature 143 160 1.5E-57 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_01805 18cc932c4d5d0b2d73cf9cbdd7e06e64 317 PRINTS PR00069 Aldo-keto reductase signature 34 58 1.5E-57 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_01805 18cc932c4d5d0b2d73cf9cbdd7e06e64 317 PRINTS PR00069 Aldo-keto reductase signature 226 250 1.5E-57 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_01805 18cc932c4d5d0b2d73cf9cbdd7e06e64 317 PIRSF PIRSF000097 1 313 7.2E-121 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_01805 18cc932c4d5d0b2d73cf9cbdd7e06e64 317 Pfam PF00248 Aldo/keto reductase family 15 291 1.3E-59 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain P40_01805 18cc932c4d5d0b2d73cf9cbdd7e06e64 317 Gene3D G3DSA:3.20.20.100 1 310 3.4E-129 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_01805 18cc932c4d5d0b2d73cf9cbdd7e06e64 317 SUPERFAMILY SSF51430 4 298 6.29E-98 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_19800 e9545aa999f26b1afe9c7120d6e8d383 124 Pfam PF01903 CbiX 10 115 7.0E-25 T 13-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 P40_19800 e9545aa999f26b1afe9c7120d6e8d383 124 SUPERFAMILY SSF53800 2 120 3.14E-29 T 13-10-2018 P40_19800 e9545aa999f26b1afe9c7120d6e8d383 124 Gene3D G3DSA:3.40.50.1400 1 123 8.3E-34 T 13-10-2018 P40_18620 c1e076bc620f3d1e097a0bc23dab0643 337 Gene3D G3DSA:1.10.10.60 218 328 7.7E-22 T 13-10-2018 P40_18620 c1e076bc620f3d1e097a0bc23dab0643 337 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 15 194 1.1E-33 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_18620 c1e076bc620f3d1e097a0bc23dab0643 337 SUPERFAMILY SSF46689 273 322 7.62E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_18620 c1e076bc620f3d1e097a0bc23dab0643 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 289 304 2.0E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_18620 c1e076bc620f3d1e097a0bc23dab0643 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 304 320 2.0E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_18620 c1e076bc620f3d1e097a0bc23dab0643 337 SMART SM00342 238 320 2.5E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_18620 c1e076bc620f3d1e097a0bc23dab0643 337 Pfam PF12833 Helix-turn-helix domain 244 320 6.6E-16 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_20040 f170d072074095121bf74848e6a40892 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 530 4.1E-25 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_20040 f170d072074095121bf74848e6a40892 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_20040 f170d072074095121bf74848e6a40892 542 Gene3D G3DSA:3.30.300.310 442 542 5.7E-36 T 13-10-2018 P40_20040 f170d072074095121bf74848e6a40892 542 Gene3D G3DSA:3.40.50.12780 8 441 4.5E-111 T 13-10-2018 P40_20040 f170d072074095121bf74848e6a40892 542 Pfam PF00501 AMP-binding enzyme 29 446 8.1E-98 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_20040 f170d072074095121bf74848e6a40892 542 SUPERFAMILY SSF56801 17 540 9.16E-149 T 13-10-2018 P40_01940 d80e83e2e8b46e058d792a424c6022d3 225 Pfam PF00072 Response regulator receiver domain 4 112 7.1E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_01940 d80e83e2e8b46e058d792a424c6022d3 225 SUPERFAMILY SSF52172 1 178 1.01E-40 T 13-10-2018 IPR011006 CheY-like superfamily P40_01940 d80e83e2e8b46e058d792a424c6022d3 225 SMART SM00448 1 112 3.1E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_01940 d80e83e2e8b46e058d792a424c6022d3 225 SMART SM00862 145 220 1.3E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_01940 d80e83e2e8b46e058d792a424c6022d3 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 1.9E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_01940 d80e83e2e8b46e058d792a424c6022d3 225 Gene3D G3DSA:3.40.50.2300 1 121 3.4E-37 T 13-10-2018 P40_01940 d80e83e2e8b46e058d792a424c6022d3 225 Gene3D G3DSA:1.10.10.10 122 224 1.6E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14765 f19eb29fa4eef0ca3c62562b0646f631 116 Pfam PF02411 MerT mercuric transport protein 1 116 8.6E-54 T 13-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 P40_02545 048915564d93e14802a4cd6b53fd0706 184 Gene3D G3DSA:3.90.79.10 6 184 5.2E-44 T 13-10-2018 P40_02545 048915564d93e14802a4cd6b53fd0706 184 SUPERFAMILY SSF55811 6 177 3.79E-36 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 P40_02545 048915564d93e14802a4cd6b53fd0706 184 Pfam PF00293 NUDIX domain 46 168 3.7E-14 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 P40_02545 048915564d93e14802a4cd6b53fd0706 184 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 P40_18775 c62206436a5593d17b339ec81635d330 135 Gene3D G3DSA:3.30.1450.10 33 120 7.5E-25 T 13-10-2018 IPR037873 BamE-like P40_18775 c62206436a5593d17b339ec81635d330 135 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 3 108 26.041 T 13-10-2018 IPR026592 Outer membrane protein assembly factor BamE P40_18775 c62206436a5593d17b339ec81635d330 135 Pfam PF04355 SmpA / OmlA family 34 98 8.9E-24 T 13-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 P40_18985 6a1a9856dea0c5d094b853880a989029 350 Pfam PF13609 Gram-negative porin 11 332 7.5E-42 T 13-10-2018 P40_18985 6a1a9856dea0c5d094b853880a989029 350 Gene3D G3DSA:2.40.160.10 25 350 5.0E-55 T 13-10-2018 IPR023614 Porin domain superfamily P40_18985 6a1a9856dea0c5d094b853880a989029 350 SUPERFAMILY SSF56935 26 350 1.6E-54 T 13-10-2018 P40_09490 9a26b5362482b22d503eca29b7a9588c 131 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 10 121 8.4E-22 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 P40_09490 9a26b5362482b22d503eca29b7a9588c 131 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 9 126 18.509 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 P40_04480 793ccd9d47e96292f88ab4c07af12dd8 96 SUPERFAMILY SSF54909 1 94 6.79E-22 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_04480 793ccd9d47e96292f88ab4c07af12dd8 96 Gene3D G3DSA:3.30.70.100 1 92 1.1E-22 T 13-10-2018 P40_04480 793ccd9d47e96292f88ab4c07af12dd8 96 Pfam PF07045 Domain of unknown function (DUF1330) 2 94 6.2E-25 T 13-10-2018 IPR010753 Domain of unknown function DUF1330 P40_04765 06b53590edecb3c1356495b5a24ba964 196 SUPERFAMILY SSF52317 1 193 4.58E-57 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_04765 06b53590edecb3c1356495b5a24ba964 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 45 59 2.9E-6 T 13-10-2018 P40_04765 06b53590edecb3c1356495b5a24ba964 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 75 91 2.9E-6 T 13-10-2018 P40_04765 06b53590edecb3c1356495b5a24ba964 196 PRINTS PR00097 Anthranilate synthase component II signature 100 108 2.5E-37 T 13-10-2018 P40_04765 06b53590edecb3c1356495b5a24ba964 196 PRINTS PR00097 Anthranilate synthase component II signature 3 17 2.5E-37 T 13-10-2018 P40_04765 06b53590edecb3c1356495b5a24ba964 196 PRINTS PR00097 Anthranilate synthase component II signature 170 183 2.5E-37 T 13-10-2018 P40_04765 06b53590edecb3c1356495b5a24ba964 196 PRINTS PR00097 Anthranilate synthase component II signature 120 132 2.5E-37 T 13-10-2018 P40_04765 06b53590edecb3c1356495b5a24ba964 196 PRINTS PR00097 Anthranilate synthase component II signature 48 57 2.5E-37 T 13-10-2018 P40_04765 06b53590edecb3c1356495b5a24ba964 196 PRINTS PR00097 Anthranilate synthase component II signature 75 86 2.5E-37 T 13-10-2018 P40_04765 06b53590edecb3c1356495b5a24ba964 196 Pfam PF00117 Glutamine amidotransferase class-I 5 191 3.4E-57 T 13-10-2018 IPR017926 Glutamine amidotransferase P40_04765 06b53590edecb3c1356495b5a24ba964 196 Gene3D G3DSA:3.40.50.880 1 194 2.7E-63 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_04765 06b53590edecb3c1356495b5a24ba964 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 192 8.4E-88 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 P40_04765 06b53590edecb3c1356495b5a24ba964 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 9.1E-14 T 13-10-2018 P40_04765 06b53590edecb3c1356495b5a24ba964 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 75 86 9.1E-14 T 13-10-2018 P40_04765 06b53590edecb3c1356495b5a24ba964 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 170 183 9.1E-14 T 13-10-2018 P40_15145 1cdbed15d87d2f94537e14346740acfe 184 SMART SM00448 4 116 1.3E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_15145 1cdbed15d87d2f94537e14346740acfe 184 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 156 176 4.3E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_15145 1cdbed15d87d2f94537e14346740acfe 184 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 139 156 4.3E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_15145 1cdbed15d87d2f94537e14346740acfe 184 Gene3D G3DSA:1.10.10.60 122 175 1.5E-23 T 13-10-2018 P40_15145 1cdbed15d87d2f94537e14346740acfe 184 Pfam PF00072 Response regulator receiver domain 7 116 6.1E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_15145 1cdbed15d87d2f94537e14346740acfe 184 SUPERFAMILY SSF52172 5 154 2.28E-27 T 13-10-2018 IPR011006 CheY-like superfamily P40_15145 1cdbed15d87d2f94537e14346740acfe 184 Gene3D G3DSA:3.40.50.2300 3 121 6.7E-22 T 13-10-2018 P40_15145 1cdbed15d87d2f94537e14346740acfe 184 Pfam PF02954 Bacterial regulatory protein, Fis family 133 172 3.5E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_08025 5557e132896e5548ab5f1c830fb53ea8 203 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 84 113 - T 13-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site P40_08025 5557e132896e5548ab5f1c830fb53ea8 203 Pfam PF01205 Uncharacterized protein family UPF0029 24 129 4.5E-31 T 13-10-2018 IPR001498 Impact, N-terminal P40_08025 5557e132896e5548ab5f1c830fb53ea8 203 Pfam PF09186 Domain of unknown function (DUF1949) 145 191 9.3E-8 T 13-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal P40_08025 5557e132896e5548ab5f1c830fb53ea8 203 Gene3D G3DSA:3.30.230.30 5 137 4.2E-51 T 13-10-2018 IPR036956 Impact, N-terminal domain superfamily P40_08025 5557e132896e5548ab5f1c830fb53ea8 203 SUPERFAMILY SSF54980 141 191 5.04E-6 T 13-10-2018 IPR035647 EF-G domain III/V-like P40_08025 5557e132896e5548ab5f1c830fb53ea8 203 SUPERFAMILY SSF54211 8 136 3.3E-41 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_06335 94e8957905f6eeb1e1fee50482f8dc65 265 SMART SM00530 16 88 1.8E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_06335 94e8957905f6eeb1e1fee50482f8dc65 265 Pfam PF13560 Helix-turn-helix domain 12 91 2.7E-17 T 13-10-2018 P40_06335 94e8957905f6eeb1e1fee50482f8dc65 265 Gene3D G3DSA:3.30.450.180 115 259 1.3E-12 T 13-10-2018 P40_06335 94e8957905f6eeb1e1fee50482f8dc65 265 SUPERFAMILY SSF47413 36 84 4.97E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_06335 94e8957905f6eeb1e1fee50482f8dc65 265 Gene3D G3DSA:1.10.260.40 20 90 1.4E-6 T 13-10-2018 P40_05355 2efdf69eab7c439e66c732eda4b8a418 296 Pfam PF01040 UbiA prenyltransferase family 22 269 5.5E-64 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 P40_05355 2efdf69eab7c439e66c732eda4b8a418 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 7 287 1.4E-103 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 P40_05355 2efdf69eab7c439e66c732eda4b8a418 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 62 84 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site P40_05355 2efdf69eab7c439e66c732eda4b8a418 296 Gene3D G3DSA:1.10.357.140 14 175 8.9E-22 T 13-10-2018 P40_05355 2efdf69eab7c439e66c732eda4b8a418 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 5 288 20.294 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 P40_20980 3f86348d6a975f12738ab73c315589b8 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 426 1.4E-88 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_20980 3f86348d6a975f12738ab73c315589b8 435 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 431 1.1E-91 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_20980 3f86348d6a975f12738ab73c315589b8 435 PIRSF PIRSF006066 4 435 3.3E-85 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_17850 c537cdc8a85d1f1da0efdbd631792b92 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 4.2E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_17850 c537cdc8a85d1f1da0efdbd631792b92 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 469 4.2E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_17850 c537cdc8a85d1f1da0efdbd631792b92 527 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 502 4.2E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_17850 c537cdc8a85d1f1da0efdbd631792b92 527 Gene3D G3DSA:3.30.450.20 194 294 5.2E-5 T 13-10-2018 P40_17850 c537cdc8a85d1f1da0efdbd631792b92 527 SUPERFAMILY SSF55874 386 518 3.93E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_17850 c537cdc8a85d1f1da0efdbd631792b92 527 SMART SM00387 416 523 4.5E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_17850 c537cdc8a85d1f1da0efdbd631792b92 527 SMART SM00388 313 378 2.6E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_17850 c537cdc8a85d1f1da0efdbd631792b92 527 SUPERFAMILY SSF47384 301 378 2.55E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_17850 c537cdc8a85d1f1da0efdbd631792b92 527 Gene3D G3DSA:1.10.287.130 301 375 1.0E-16 T 13-10-2018 P40_17850 c537cdc8a85d1f1da0efdbd631792b92 527 Pfam PF00512 His Kinase A (phospho-acceptor) domain 313 375 3.2E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_17850 c537cdc8a85d1f1da0efdbd631792b92 527 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 518 2.8E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_17850 c537cdc8a85d1f1da0efdbd631792b92 527 Gene3D G3DSA:3.30.565.10 379 525 8.5E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_01235 1b3d8b43b363b7d2ef2acbd84f7dd3cf 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 1.3E-26 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P40_01235 1b3d8b43b363b7d2ef2acbd84f7dd3cf 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 P40_01235 1b3d8b43b363b7d2ef2acbd84f7dd3cf 369 Gene3D G3DSA:3.40.50.720 174 312 1.4E-154 T 13-10-2018 P40_01235 1b3d8b43b363b7d2ef2acbd84f7dd3cf 369 Gene3D G3DSA:3.90.180.10 6 364 1.4E-154 T 13-10-2018 P40_01235 1b3d8b43b363b7d2ef2acbd84f7dd3cf 369 SUPERFAMILY SSF51735 160 334 7.23E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_01235 1b3d8b43b363b7d2ef2acbd84f7dd3cf 369 Pfam PF00107 Zinc-binding dehydrogenase 197 324 7.0E-25 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 P40_01235 1b3d8b43b363b7d2ef2acbd84f7dd3cf 369 SUPERFAMILY SSF50129 1 185 2.13E-74 T 13-10-2018 IPR011032 GroES-like superfamily P40_01235 1b3d8b43b363b7d2ef2acbd84f7dd3cf 369 SMART SM00829 12 367 0.0032 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P40_01235 1b3d8b43b363b7d2ef2acbd84f7dd3cf 369 SUPERFAMILY SSF50129 318 369 1.88E-12 T 13-10-2018 IPR011032 GroES-like superfamily P40_01235 1b3d8b43b363b7d2ef2acbd84f7dd3cf 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 3.5E-219 T 13-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 P40_01015 7b5a713b04629cfb806ce19d379579d9 373 Gene3D G3DSA:3.40.190.170 32 360 3.2E-59 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_01015 7b5a713b04629cfb806ce19d379579d9 373 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 319 2.5E-19 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_13915 d1c71baa48cf98946643de32c152eb71 145 PIRSF PIRSF006173 1 144 2.2E-55 T 13-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 P40_02330 74996034a7f8596df6fa72f3418f4c3a 120 Pfam PF00072 Response regulator receiver domain 4 115 2.0E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_02330 74996034a7f8596df6fa72f3418f4c3a 120 Gene3D G3DSA:3.40.50.12740 1 120 6.6E-41 T 13-10-2018 P40_02330 74996034a7f8596df6fa72f3418f4c3a 120 SMART SM00448 2 115 2.1E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_02330 74996034a7f8596df6fa72f3418f4c3a 120 SUPERFAMILY SSF52172 1 120 2.99E-36 T 13-10-2018 IPR011006 CheY-like superfamily P40_04255 189e7d436fc9152f5535f5a44ca843e3 406 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 228 396 3.0E-47 T 13-10-2018 IPR000160 GGDEF domain P40_04255 189e7d436fc9152f5535f5a44ca843e3 406 SUPERFAMILY SSF55073 237 398 5.02E-44 T 13-10-2018 IPR029787 Nucleotide cyclase P40_04255 189e7d436fc9152f5535f5a44ca843e3 406 Gene3D G3DSA:3.30.70.270 218 399 6.9E-53 T 13-10-2018 P40_04255 189e7d436fc9152f5535f5a44ca843e3 406 SMART SM00267 221 397 3.8E-58 T 13-10-2018 IPR000160 GGDEF domain P40_04255 189e7d436fc9152f5535f5a44ca843e3 406 Pfam PF00990 Diguanylate cyclase, GGDEF domain 234 392 1.1E-42 T 13-10-2018 IPR000160 GGDEF domain P40_18915 c3649a35837fb215edbb8beb1be70cd0 125 Gene3D G3DSA:3.10.180.10 1 124 3.4E-24 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_18915 c3649a35837fb215edbb8beb1be70cd0 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 116 3.3E-6 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain P40_18915 c3649a35837fb215edbb8beb1be70cd0 125 SUPERFAMILY SSF54593 8 118 2.34E-20 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_08835 322d92d68abb4bf0f6482258d855326d 234 SUPERFAMILY SSF88713 12 158 3.18E-6 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 P40_01465 d12cb91bb8224dfcb46f86971c5860e5 128 Pfam PF14552 Tautomerase enzyme 36 112 6.4E-24 T 13-10-2018 IPR037479 Tautomerase, MSAD family P40_01465 d12cb91bb8224dfcb46f86971c5860e5 128 Gene3D G3DSA:3.30.429.10 1 128 1.4E-39 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily P40_01465 d12cb91bb8224dfcb46f86971c5860e5 128 SUPERFAMILY SSF55331 1 119 8.2E-33 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily P40_13640 078cdc7e8c79f08f097921e82f6b1bcc 108 Pfam PF00581 Rhodanese-like domain 8 102 2.0E-12 T 13-10-2018 IPR001763 Rhodanese-like domain P40_13640 078cdc7e8c79f08f097921e82f6b1bcc 108 SUPERFAMILY SSF52821 5 108 7.86E-26 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_13640 078cdc7e8c79f08f097921e82f6b1bcc 108 Gene3D G3DSA:3.40.250.10 3 108 4.8E-24 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_13640 078cdc7e8c79f08f097921e82f6b1bcc 108 SMART SM00450 5 105 1.2E-12 T 13-10-2018 IPR001763 Rhodanese-like domain P40_13640 078cdc7e8c79f08f097921e82f6b1bcc 108 ProSitePatterns PS00380 Rhodanese signature 1. 31 42 - T 13-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 P40_00735 6657df3d16f010f40a156474701866ac 258 SUPERFAMILY SSF63380 5 100 3.89E-24 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel P40_00735 6657df3d16f010f40a156474701866ac 258 SUPERFAMILY SSF52343 104 242 3.01E-38 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_00735 6657df3d16f010f40a156474701866ac 258 Gene3D G3DSA:3.40.50.80 101 254 3.6E-40 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P40_00735 6657df3d16f010f40a156474701866ac 258 Pfam PF00175 Oxidoreductase NAD-binding domain 113 228 8.3E-7 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 P40_00735 6657df3d16f010f40a156474701866ac 258 Gene3D G3DSA:2.40.30.10 1 98 2.2E-28 T 13-10-2018 P40_00735 6657df3d16f010f40a156474701866ac 258 Pfam PF00970 Oxidoreductase FAD-binding domain 16 98 1.2E-5 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 P40_19645 5ab5ac0258093b3ef5f2908b603bd493 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.3E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_19645 5ab5ac0258093b3ef5f2908b603bd493 301 Gene3D G3DSA:3.40.190.10 91 291 2.0E-55 T 13-10-2018 P40_19645 5ab5ac0258093b3ef5f2908b603bd493 301 Gene3D G3DSA:3.40.190.10 165 266 2.0E-55 T 13-10-2018 P40_19645 5ab5ac0258093b3ef5f2908b603bd493 301 Gene3D G3DSA:1.10.10.10 3 89 6.9E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_19645 5ab5ac0258093b3ef5f2908b603bd493 301 SUPERFAMILY SSF46785 3 87 1.25E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_19645 5ab5ac0258093b3ef5f2908b603bd493 301 SUPERFAMILY SSF53850 89 293 1.05E-37 T 13-10-2018 P40_19645 5ab5ac0258093b3ef5f2908b603bd493 301 Pfam PF03466 LysR substrate binding domain 88 291 7.3E-36 T 13-10-2018 IPR005119 LysR, substrate-binding P40_09980 4369b1fd03a29a289a928ebeea65e534 436 SUPERFAMILY SSF48239 10 221 1.57E-16 T 13-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid P40_09980 4369b1fd03a29a289a928ebeea65e534 436 Gene3D G3DSA:1.50.10.20 5 89 3.0E-7 T 13-10-2018 P40_09980 4369b1fd03a29a289a928ebeea65e534 436 SUPERFAMILY SSF52058 295 378 1.39E-8 T 13-10-2018 P40_09980 4369b1fd03a29a289a928ebeea65e534 436 Gene3D G3DSA:1.50.10.20 90 227 8.3E-7 T 13-10-2018 P40_09980 4369b1fd03a29a289a928ebeea65e534 436 Gene3D G3DSA:3.80.10.10 285 389 5.8E-17 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily P40_09110 b7c0088762bdb57b045524eb1fb56cce 269 Pfam PF04261 Dyp-type peroxidase family 26 264 2.3E-56 T 13-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 P40_09110 b7c0088762bdb57b045524eb1fb56cce 269 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 27 264 4.9E-57 T 13-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 P40_09110 b7c0088762bdb57b045524eb1fb56cce 269 SUPERFAMILY SSF54909 8 268 1.63E-72 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_15205 7d016623afbf0dbaaded4d671ff64c5c 207 Gene3D G3DSA:3.40.50.150 24 201 4.0E-34 T 13-10-2018 P40_15205 7d016623afbf0dbaaded4d671ff64c5c 207 SUPERFAMILY SSF53335 5 187 1.21E-31 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_15205 7d016623afbf0dbaaded4d671ff64c5c 207 Pfam PF08241 Methyltransferase domain 36 133 2.7E-19 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 P40_01980 a7cd2d6454146db691132093de78278a 421 Pfam PF08281 Sigma-70, region 4 116 167 2.1E-7 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_01980 a7cd2d6454146db691132093de78278a 421 SUPERFAMILY SSF48452 18 399 9.28E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_01980 a7cd2d6454146db691132093de78278a 421 Pfam PF04542 Sigma-70 region 2 16 83 1.9E-11 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_01980 a7cd2d6454146db691132093de78278a 421 SUPERFAMILY SSF88659 106 169 5.42E-11 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_01980 a7cd2d6454146db691132093de78278a 421 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 170 5.1E-15 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_01980 a7cd2d6454146db691132093de78278a 421 Gene3D G3DSA:1.10.1740.10 9 79 5.6E-8 T 13-10-2018 P40_01980 a7cd2d6454146db691132093de78278a 421 SUPERFAMILY SSF88946 13 93 8.63E-14 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_01980 a7cd2d6454146db691132093de78278a 421 Gene3D G3DSA:1.10.10.10 121 171 1.1E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_17320 3409a4e45f7df26ca5ce17fc2524d942 88 SUPERFAMILY SSF89447 1 38 1.92E-5 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily P40_17320 3409a4e45f7df26ca5ce17fc2524d942 88 SMART SM00966 4 50 4.7E-6 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 P40_17320 3409a4e45f7df26ca5ce17fc2524d942 88 Gene3D G3DSA:2.10.260.10 2 40 4.4E-6 T 13-10-2018 P40_14220 da2070ac3b7906249df9fdb55f48eae0 576 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 30 560 3.0E-168 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 P40_14220 da2070ac3b7906249df9fdb55f48eae0 576 Gene3D G3DSA:3.20.70.20 43 571 5.5E-106 T 13-10-2018 P40_14220 da2070ac3b7906249df9fdb55f48eae0 576 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 30 560 2.8E-135 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 P40_14220 da2070ac3b7906249df9fdb55f48eae0 576 SUPERFAMILY SSF51998 30 562 1.56E-154 T 13-10-2018 P40_19580 8162323beff57f0d6736abc28195f6fc 235 Gene3D G3DSA:3.40.50.1000 5 223 8.2E-61 T 13-10-2018 IPR023214 HAD superfamily P40_19580 8162323beff57f0d6736abc28195f6fc 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 201 7.5E-18 T 13-10-2018 P40_19580 8162323beff57f0d6736abc28195f6fc 235 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 201 6.9E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_19580 8162323beff57f0d6736abc28195f6fc 235 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 75 196 2.7E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_19580 8162323beff57f0d6736abc28195f6fc 235 SUPERFAMILY SSF56784 5 230 3.69E-40 T 13-10-2018 IPR036412 HAD-like superfamily P40_19580 8162323beff57f0d6736abc28195f6fc 235 Gene3D G3DSA:1.20.120.1600 18 105 8.2E-61 T 13-10-2018 P40_14250 9fef86e64f9f6263bd9b4c7184273b1c 518 SUPERFAMILY SSF54862 1 489 2.51E-180 T 13-10-2018 P40_14250 9fef86e64f9f6263bd9b4c7184273b1c 518 Gene3D G3DSA:3.30.70.20 1 297 2.7E-102 T 13-10-2018 P40_14250 9fef86e64f9f6263bd9b4c7184273b1c 518 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 2.5E-30 T 13-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 P40_14250 9fef86e64f9f6263bd9b4c7184273b1c 518 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 492 1.3E-304 T 13-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 P40_14250 9fef86e64f9f6263bd9b4c7184273b1c 518 Gene3D G3DSA:1.10.3650.10 358 434 2.8E-30 T 13-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 P40_14250 9fef86e64f9f6263bd9b4c7184273b1c 518 Pfam PF13247 4Fe-4S dicluster domain 175 271 1.7E-37 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain P40_17885 772e82ab62f609434ac5fece1a04c738 270 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 40 6.4E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_17885 772e82ab62f609434ac5fece1a04c738 270 Pfam PF07963 Prokaryotic N-terminal methylation motif 15 39 1.3E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_17885 772e82ab62f609434ac5fece1a04c738 270 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 18 38 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_17885 772e82ab62f609434ac5fece1a04c738 270 Pfam PF16074 Type IV Pilus-assembly protein W 144 264 2.4E-18 T 13-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 P40_17885 772e82ab62f609434ac5fece1a04c738 270 SUPERFAMILY SSF54523 20 125 1.96E-5 T 13-10-2018 P40_19030 87fe80458c370efaa2d3866f9e732611 176 SUPERFAMILY SSF158694 15 175 2.35E-51 T 13-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 P40_19030 87fe80458c370efaa2d3866f9e732611 176 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 16 173 4.5E-62 T 13-10-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 P40_19030 87fe80458c370efaa2d3866f9e732611 176 Gene3D G3DSA:1.10.3330.10 14 176 2.3E-59 T 13-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 P40_19030 87fe80458c370efaa2d3866f9e732611 176 Pfam PF09349 OHCU decarboxylase 14 171 3.9E-44 T 13-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 P40_15200 54eb15b59ed68ad4f81ed327ba64d69a 588 SUPERFAMILY SSF56300 4 231 2.06E-20 T 13-10-2018 P40_15200 54eb15b59ed68ad4f81ed327ba64d69a 588 Gene3D G3DSA:3.60.21.10 2 214 4.7E-11 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like P40_15200 54eb15b59ed68ad4f81ed327ba64d69a 588 Pfam PF00149 Calcineurin-like phosphoesterase 10 185 1.7E-7 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 P40_18640 df3d7d896bd10a0a0fc5ca9eacd80dbd 455 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 46 388 1.1E-124 T 13-10-2018 IPR030931 Group II intron reverse transcriptase/maturase P40_18640 df3d7d896bd10a0a0fc5ca9eacd80dbd 455 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 164 182 3.5E-6 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 P40_18640 df3d7d896bd10a0a0fc5ca9eacd80dbd 455 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 96 109 3.5E-6 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 P40_18640 df3d7d896bd10a0a0fc5ca9eacd80dbd 455 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 222 235 3.5E-6 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 P40_18640 df3d7d896bd10a0a0fc5ca9eacd80dbd 455 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 101 307 1.4E-42 T 13-10-2018 IPR000477 Reverse transcriptase domain P40_18640 df3d7d896bd10a0a0fc5ca9eacd80dbd 455 Pfam PF08388 Group II intron, maturase-specific domain 323 400 1.2E-17 T 13-10-2018 IPR013597 Group II intron, maturase-specific P40_18640 df3d7d896bd10a0a0fc5ca9eacd80dbd 455 SUPERFAMILY SSF56672 34 384 1.72E-54 T 13-10-2018 P40_00055 d5b94d204be63eb43c57837cd9c5db3d 389 Gene3D G3DSA:3.40.50.2300 148 276 7.1E-79 T 13-10-2018 P40_00055 d5b94d204be63eb43c57837cd9c5db3d 389 Gene3D G3DSA:3.40.50.2300 27 352 7.1E-79 T 13-10-2018 P40_00055 d5b94d204be63eb43c57837cd9c5db3d 389 SUPERFAMILY SSF53822 25 385 1.63E-76 T 13-10-2018 IPR028082 Periplasmic binding protein-like I P40_00055 d5b94d204be63eb43c57837cd9c5db3d 389 Pfam PF13458 Periplasmic binding protein 25 354 4.6E-56 T 13-10-2018 IPR028081 Leucine-binding protein domain P40_00055 d5b94d204be63eb43c57837cd9c5db3d 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 283 296 1.2E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_00055 d5b94d204be63eb43c57837cd9c5db3d 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 1.2E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_00055 d5b94d204be63eb43c57837cd9c5db3d 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 1.2E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_02170 20d6fa1aead55e6f00c4307f3f440006 175 SUPERFAMILY SSF53597 10 175 6.64E-61 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 P40_02170 20d6fa1aead55e6f00c4307f3f440006 175 Gene3D G3DSA:3.40.430.10 9 175 4.3E-61 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 P40_02170 20d6fa1aead55e6f00c4307f3f440006 175 Pfam PF00186 Dihydrofolate reductase 11 174 1.9E-60 T 13-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 P40_02170 20d6fa1aead55e6f00c4307f3f440006 175 PRINTS PR00070 Dihydrofolate reductase signature 22 32 3.3E-15 T 13-10-2018 P40_02170 20d6fa1aead55e6f00c4307f3f440006 175 PRINTS PR00070 Dihydrofolate reductase signature 36 44 3.3E-15 T 13-10-2018 P40_02170 20d6fa1aead55e6f00c4307f3f440006 175 PRINTS PR00070 Dihydrofolate reductase signature 49 60 3.3E-15 T 13-10-2018 P40_02170 20d6fa1aead55e6f00c4307f3f440006 175 PRINTS PR00070 Dihydrofolate reductase signature 106 120 3.3E-15 T 13-10-2018 P40_02170 20d6fa1aead55e6f00c4307f3f440006 175 PIRSF PIRSF000194 6 175 1.1E-64 T 13-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 P40_02170 20d6fa1aead55e6f00c4307f3f440006 175 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 22 44 - T 13-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 P40_21430 4c43f88ea1578003057376df0f42653b 536 SUPERFAMILY SSF56801 10 529 8.5E-140 T 13-10-2018 P40_21430 4c43f88ea1578003057376df0f42653b 536 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_21430 4c43f88ea1578003057376df0f42653b 536 Pfam PF13193 AMP-binding enzyme C-terminal domain 442 516 1.5E-14 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_21430 4c43f88ea1578003057376df0f42653b 536 Gene3D G3DSA:3.40.50.12780 11 428 1.8E-99 T 13-10-2018 P40_21430 4c43f88ea1578003057376df0f42653b 536 Gene3D G3DSA:3.30.300.310 429 532 4.1E-28 T 13-10-2018 P40_21430 4c43f88ea1578003057376df0f42653b 536 Pfam PF00501 AMP-binding enzyme 28 432 4.3E-90 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_06525 fede5df3e6939d4b613fb268b108e444 108 Gene3D G3DSA:3.30.70.120 1 105 5.7E-43 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal P40_06525 fede5df3e6939d4b613fb268b108e444 108 SUPERFAMILY SSF102705 3 105 9.81E-27 T 13-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily P40_03590 f1a61854de8dfde2f86f60367b8ad169 180 Hamap MF_00045 Oligoribonuclease [orn]. 2 180 43.891 T 13-10-2018 IPR022894 Oligoribonuclease GO:0000175 P40_03590 f1a61854de8dfde2f86f60367b8ad169 180 SMART SM00479 6 179 4.0E-23 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III P40_03590 f1a61854de8dfde2f86f60367b8ad169 180 Pfam PF00929 Exonuclease 8 169 9.7E-36 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III P40_03590 f1a61854de8dfde2f86f60367b8ad169 180 Gene3D G3DSA:3.30.420.10 2 180 6.3E-73 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_03590 f1a61854de8dfde2f86f60367b8ad169 180 SUPERFAMILY SSF53098 1 178 1.19E-48 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_01010 7434836cf936a250fa9d806130855789 260 SMART SM00346 13 101 1.4E-22 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 P40_01010 7434836cf936a250fa9d806130855789 260 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 12 254 1.7E-86 T 13-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 P40_01010 7434836cf936a250fa9d806130855789 260 SUPERFAMILY SSF55781 78 256 3.2E-41 T 13-10-2018 P40_01010 7434836cf936a250fa9d806130855789 260 Gene3D G3DSA:1.10.10.10 2 79 4.3E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_01010 7434836cf936a250fa9d806130855789 260 Pfam PF01614 Bacterial transcriptional regulator 131 253 4.8E-27 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal P40_01010 7434836cf936a250fa9d806130855789 260 SUPERFAMILY SSF46785 14 85 8.06E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_01010 7434836cf936a250fa9d806130855789 260 Pfam PF09339 IclR helix-turn-helix domain 17 66 2.3E-12 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 P40_01010 7434836cf936a250fa9d806130855789 260 Gene3D G3DSA:3.30.450.40 80 258 6.3E-49 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_01915 f6f61fad95e2e3bc26ced93a070e12b6 140 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 129 3.7E-10 T 13-10-2018 IPR028973 PhnB-like P40_01915 f6f61fad95e2e3bc26ced93a070e12b6 140 SUPERFAMILY SSF54593 2 132 3.32E-34 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_01915 f6f61fad95e2e3bc26ced93a070e12b6 140 Gene3D G3DSA:3.10.180.10 7 138 1.4E-45 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_10165 e1862dea20fb13357327a12048ae08e3 223 Pfam PF11444 Protein of unknown function (DUF2895) 8 203 1.6E-91 T 13-10-2018 IPR021548 Protein of unknown function DUF2895 P40_10165 e1862dea20fb13357327a12048ae08e3 223 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 204 5.4E-90 T 13-10-2018 IPR021548 Protein of unknown function DUF2895 P40_10080 b8fdf8f34747d535a5788de58973465e 472 Pfam PF13245 AAA domain 15 170 2.1E-12 T 13-10-2018 P40_10080 b8fdf8f34747d535a5788de58973465e 472 SUPERFAMILY SSF52540 16 469 3.67E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10080 b8fdf8f34747d535a5788de58973465e 472 Gene3D G3DSA:3.40.50.300 6 186 7.0E-27 T 13-10-2018 P40_17225 e4643bcc5f54b619a4d08b96d718b17b 469 SUPERFAMILY SSF75304 4 465 4.71E-133 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_17225 e4643bcc5f54b619a4d08b96d718b17b 469 ProSitePatterns PS00571 Amidases signature. 155 186 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 P40_17225 e4643bcc5f54b619a4d08b96d718b17b 469 Gene3D G3DSA:3.90.1300.10 1 466 5.4E-147 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_17225 e4643bcc5f54b619a4d08b96d718b17b 469 Pfam PF01425 Amidase 26 447 1.3E-103 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_01765 0ce7ac1f5e6899f87247381bbcf894de 171 SUPERFAMILY SSF55729 6 168 8.29E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_01765 0ce7ac1f5e6899f87247381bbcf894de 171 Pfam PF13420 Acetyltransferase (GNAT) domain 6 157 2.2E-24 T 13-10-2018 P40_01765 0ce7ac1f5e6899f87247381bbcf894de 171 Gene3D G3DSA:3.40.630.30 3 170 1.6E-43 T 13-10-2018 P40_14540 f9d4f48838365d05c0aacd96141afcc8 483 Pfam PF13396 Phospholipase_D-nuclease N-terminal 34 74 3.8E-9 T 13-10-2018 IPR027379 Cardiolipin synthase N-terminal P40_14540 f9d4f48838365d05c0aacd96141afcc8 483 SUPERFAMILY SSF56024 106 313 1.44E-44 T 13-10-2018 P40_14540 f9d4f48838365d05c0aacd96141afcc8 483 SUPERFAMILY SSF56024 275 457 5.16E-38 T 13-10-2018 P40_14540 f9d4f48838365d05c0aacd96141afcc8 483 SMART SM00155 396 423 0.12 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 P40_14540 f9d4f48838365d05c0aacd96141afcc8 483 SMART SM00155 225 252 0.0042 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 P40_14540 f9d4f48838365d05c0aacd96141afcc8 483 Gene3D G3DSA:3.30.870.10 315 453 8.2E-23 T 13-10-2018 P40_14540 f9d4f48838365d05c0aacd96141afcc8 483 Pfam PF13091 PLD-like domain 144 282 4.6E-16 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 P40_14540 f9d4f48838365d05c0aacd96141afcc8 483 Pfam PF13091 PLD-like domain 324 447 6.9E-24 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 P40_14540 f9d4f48838365d05c0aacd96141afcc8 483 Gene3D G3DSA:3.30.870.10 123 309 3.4E-42 T 13-10-2018 P40_13620 22bcbf9117c27c1e1b089b299c85d1f6 224 Pfam PF13649 Methyltransferase domain 45 138 8.3E-10 T 13-10-2018 P40_13620 22bcbf9117c27c1e1b089b299c85d1f6 224 Gene3D G3DSA:3.40.50.150 7 223 3.7E-33 T 13-10-2018 P40_13620 22bcbf9117c27c1e1b089b299c85d1f6 224 SUPERFAMILY SSF53335 13 221 3.55E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_08560 ba196828a9aec7db8eeec08460738885 290 SUPERFAMILY SSF51735 14 257 2.09E-68 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_08560 ba196828a9aec7db8eeec08460738885 290 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 198 1.5E-4 T 13-10-2018 P40_08560 ba196828a9aec7db8eeec08460738885 290 Gene3D G3DSA:3.40.50.720 2 271 1.5E-75 T 13-10-2018 P40_08560 ba196828a9aec7db8eeec08460738885 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 6.1E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_08560 ba196828a9aec7db8eeec08460738885 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 6.1E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_08560 ba196828a9aec7db8eeec08460738885 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 6.1E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_08560 ba196828a9aec7db8eeec08460738885 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 6.1E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_08560 ba196828a9aec7db8eeec08460738885 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 6.1E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_08560 ba196828a9aec7db8eeec08460738885 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 6.1E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_08560 ba196828a9aec7db8eeec08460738885 290 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 256 3.0E-54 T 13-10-2018 P40_14635 5bf3e5ffc4fc0b2ead98ff136daeba6e 1185 Pfam PF02384 N-6 DNA Methylase 481 575 3.9E-6 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 P40_14635 5bf3e5ffc4fc0b2ead98ff136daeba6e 1185 SUPERFAMILY SSF53335 74 648 5.33E-64 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_14635 5bf3e5ffc4fc0b2ead98ff136daeba6e 1185 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 488 494 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 P40_14635 5bf3e5ffc4fc0b2ead98ff136daeba6e 1185 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 240 256 9.4E-9 T 13-10-2018 P40_14635 5bf3e5ffc4fc0b2ead98ff136daeba6e 1185 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 485 497 9.4E-9 T 13-10-2018 P40_14635 5bf3e5ffc4fc0b2ead98ff136daeba6e 1185 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 313 327 9.4E-9 T 13-10-2018 P40_10520 2c5bd5724c57b903a3280e383a99d089 349 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 130 9.4E-38 T 13-10-2018 IPR010657 ImpA, N-terminal P40_10520 2c5bd5724c57b903a3280e383a99d089 349 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 5 339 1.0E-112 T 13-10-2018 IPR017740 Type VI secretion system-associated, ImpA P40_05940 78c7f5d1ac713b36cb6935deaf7217b8 378 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 13-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 P40_05940 78c7f5d1ac713b36cb6935deaf7217b8 378 SUPERFAMILY SSF51395 5 375 3.48E-94 T 13-10-2018 P40_05940 78c7f5d1ac713b36cb6935deaf7217b8 378 Gene3D G3DSA:3.20.20.70 2 378 2.6E-124 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_05940 78c7f5d1ac713b36cb6935deaf7217b8 378 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 378 72.92 T 13-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 P40_05940 78c7f5d1ac713b36cb6935deaf7217b8 378 Pfam PF01070 FMN-dependent dehydrogenase 13 375 4.4E-126 T 13-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 P40_05940 78c7f5d1ac713b36cb6935deaf7217b8 378 PIRSF PIRSF000138 1 378 1.8E-120 T 13-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 P40_18275 b787087ecf4f076795c922ea061141a6 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 6.5E-69 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 P40_18275 b787087ecf4f076795c922ea061141a6 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 13-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18275 b787087ecf4f076795c922ea061141a6 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 9.7E-68 T 13-10-2018 IPR023798 Ribosomal protein S7 domain P40_18275 b787087ecf4f076795c922ea061141a6 156 Gene3D G3DSA:1.10.455.10 2 155 9.7E-62 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily P40_18275 b787087ecf4f076795c922ea061141a6 156 PIRSF PIRSF002122 3 156 2.5E-58 T 13-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 P40_18275 b787087ecf4f076795c922ea061141a6 156 SUPERFAMILY SSF47973 6 149 4.58E-60 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily P40_18275 b787087ecf4f076795c922ea061141a6 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.6 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 P40_03880 5e6bd3b4d70a70cf99f6d00bb435f5bd 256 PIRSF PIRSF037834 2 256 1.3E-89 T 13-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 P40_03880 5e6bd3b4d70a70cf99f6d00bb435f5bd 256 Gene3D G3DSA:1.20.1260.10 2 256 1.3E-92 T 13-10-2018 IPR012347 Ferritin-like P40_03880 5e6bd3b4d70a70cf99f6d00bb435f5bd 256 Pfam PF05138 Phenylacetic acid catabolic protein 6 256 5.1E-87 T 13-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 P40_03880 5e6bd3b4d70a70cf99f6d00bb435f5bd 256 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 19 256 5.0E-79 T 13-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 P40_03880 5e6bd3b4d70a70cf99f6d00bb435f5bd 256 SUPERFAMILY SSF47240 9 250 1.49E-75 T 13-10-2018 IPR009078 Ferritin-like superfamily P40_09335 9438782adc6a852c24ede1331e52afb2 289 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 11 272 57.432 T 13-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 P40_09335 9438782adc6a852c24ede1331e52afb2 289 Gene3D G3DSA:3.40.50.620 4 269 2.8E-48 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_09335 9438782adc6a852c24ede1331e52afb2 289 PIRSF PIRSF004976 4 281 8.2E-73 T 13-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 P40_09335 9438782adc6a852c24ede1331e52afb2 289 SUPERFAMILY SSF52402 18 237 4.85E-54 T 13-10-2018 P40_09335 9438782adc6a852c24ede1331e52afb2 289 Pfam PF01171 PP-loop family 42 205 3.4E-12 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 P40_00575 1d7dc502f18c40b3b8c4fe22582d0243 339 Gene3D G3DSA:3.40.50.150 51 328 6.0E-75 T 13-10-2018 P40_00575 1d7dc502f18c40b3b8c4fe22582d0243 339 SUPERFAMILY SSF53335 58 327 8.59E-61 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_00575 1d7dc502f18c40b3b8c4fe22582d0243 339 Pfam PF02353 Mycolic acid cyclopropane synthetase 55 320 2.6E-39 T 13-10-2018 P40_02700 b3fa8df2f4ed175c97271c9c7454d658 409 SUPERFAMILY SSF55021 4 82 1.72E-12 T 13-10-2018 P40_02700 b3fa8df2f4ed175c97271c9c7454d658 409 SUPERFAMILY SSF56784 191 397 2.27E-54 T 13-10-2018 IPR036412 HAD-like superfamily P40_02700 b3fa8df2f4ed175c97271c9c7454d658 409 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 194 363 1.3E-35 T 13-10-2018 P40_02700 b3fa8df2f4ed175c97271c9c7454d658 409 Pfam PF13740 ACT domain 3 78 1.9E-24 T 13-10-2018 P40_02700 b3fa8df2f4ed175c97271c9c7454d658 409 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 179 397 1.3E-83 T 13-10-2018 P40_02700 b3fa8df2f4ed175c97271c9c7454d658 409 Gene3D G3DSA:3.30.70.260 2 83 1.5E-13 T 13-10-2018 P40_02700 b3fa8df2f4ed175c97271c9c7454d658 409 Gene3D G3DSA:3.40.50.1000 101 398 3.8E-87 T 13-10-2018 IPR023214 HAD superfamily P40_02700 b3fa8df2f4ed175c97271c9c7454d658 409 Pfam PF12710 haloacid dehalogenase-like hydrolase 195 362 4.8E-24 T 13-10-2018 P40_18805 f61a94c8486cf481b7768a4cc32f5845 316 Gene3D G3DSA:3.30.420.10 155 304 6.6E-24 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_18805 f61a94c8486cf481b7768a4cc32f5845 316 SUPERFAMILY SSF53098 131 304 1.01E-35 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_18805 f61a94c8486cf481b7768a4cc32f5845 316 Pfam PF13011 leucine-zipper of insertion element IS481 1 84 5.5E-30 T 13-10-2018 IPR024967 DNA-binding domain, IS481-type P40_18805 f61a94c8486cf481b7768a4cc32f5845 316 SUPERFAMILY SSF46689 7 111 3.4E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_18805 f61a94c8486cf481b7768a4cc32f5845 316 Pfam PF00665 Integrase core domain 130 264 2.5E-28 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 P40_15675 5de5b93653997b820263c1caeee027e7 572 SMART SM00020 24 270 1.5E-43 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 P40_15675 5de5b93653997b820263c1caeee027e7 572 SUPERFAMILY SSF50494 7 273 5.1E-52 T 13-10-2018 IPR009003 Peptidase S1, PA clan P40_15675 5de5b93653997b820263c1caeee027e7 572 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 52 67 3.8E-13 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 P40_15675 5de5b93653997b820263c1caeee027e7 572 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 219 231 3.8E-13 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 P40_15675 5de5b93653997b820263c1caeee027e7 572 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 115 129 3.8E-13 T 13-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 P40_15675 5de5b93653997b820263c1caeee027e7 572 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 220 231 - T 13-10-2018 IPR033116 Serine proteases, trypsin family, serine active site P40_15675 5de5b93653997b820263c1caeee027e7 572 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 62 67 - T 13-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 P40_15675 5de5b93653997b820263c1caeee027e7 572 Gene3D G3DSA:2.40.10.10 17 274 4.9E-48 T 13-10-2018 P40_15675 5de5b93653997b820263c1caeee027e7 572 Pfam PF00089 Trypsin 25 269 4.0E-39 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 P40_02980 aaa64aa9eccc29cac0a5f399d7782ccc 599 Pfam PF00437 Type II/IV secretion system protein 223 483 3.5E-73 T 13-10-2018 IPR001482 Type II/IV secretion system protein P40_02980 aaa64aa9eccc29cac0a5f399d7782ccc 599 Gene3D G3DSA:3.30.450.90 188 316 4.4E-42 T 13-10-2018 P40_02980 aaa64aa9eccc29cac0a5f399d7782ccc 599 SMART SM00382 344 467 1.0E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_02980 aaa64aa9eccc29cac0a5f399d7782ccc 599 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 70 173 2.4E-13 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal P40_02980 aaa64aa9eccc29cac0a5f399d7782ccc 599 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 411 425 - T 13-10-2018 IPR001482 Type II/IV secretion system protein P40_02980 aaa64aa9eccc29cac0a5f399d7782ccc 599 SUPERFAMILY SSF160246 55 164 3.66E-9 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily P40_02980 aaa64aa9eccc29cac0a5f399d7782ccc 599 Gene3D G3DSA:3.40.50.300 321 596 4.5E-102 T 13-10-2018 P40_02980 aaa64aa9eccc29cac0a5f399d7782ccc 599 SUPERFAMILY SSF52540 204 591 2.46E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_15165 6157e09572410e21714a3f8095f4ab98 571 SUPERFAMILY SSF55681 10 474 1.14E-107 T 13-10-2018 P40_15165 6157e09572410e21714a3f8095f4ab98 571 SUPERFAMILY SSF55826 218 387 1.96E-31 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 P40_15165 6157e09572410e21714a3f8095f4ab98 571 Gene3D G3DSA:3.90.960.10 240 386 8.5E-238 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 P40_15165 6157e09572410e21714a3f8095f4ab98 571 PIRSF PIRSF001535 1 571 7.6E-268 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 P40_15165 6157e09572410e21714a3f8095f4ab98 571 Gene3D G3DSA:3.40.50.800 4 551 8.5E-238 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily P40_15165 6157e09572410e21714a3f8095f4ab98 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 456 1.6E-48 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_15165 6157e09572410e21714a3f8095f4ab98 571 Pfam PF03129 Anticodon binding domain 472 567 1.4E-17 T 13-10-2018 IPR004154 Anticodon-binding P40_15165 6157e09572410e21714a3f8095f4ab98 571 SUPERFAMILY SSF52954 461 570 1.6E-28 T 13-10-2018 P40_15165 6157e09572410e21714a3f8095f4ab98 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 566 8.9E-245 T 13-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 P40_15165 6157e09572410e21714a3f8095f4ab98 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 373 6.8E-27 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 P40_15165 6157e09572410e21714a3f8095f4ab98 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 569 41.904 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 P40_15165 6157e09572410e21714a3f8095f4ab98 571 Gene3D G3DSA:3.30.930.10 11 462 8.5E-238 T 13-10-2018 P40_15165 6157e09572410e21714a3f8095f4ab98 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.3E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 P40_15165 6157e09572410e21714a3f8095f4ab98 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.3E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 P40_15165 6157e09572410e21714a3f8095f4ab98 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.3E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 P40_15165 6157e09572410e21714a3f8095f4ab98 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.3E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 P40_11190 566737f647d1c329fe8319067d6ccb2a 204 Gene3D G3DSA:3.40.50.1110 20 203 1.9E-64 T 13-10-2018 IPR036514 SGNH hydrolase superfamily P40_11190 566737f647d1c329fe8319067d6ccb2a 204 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 24 182 3.8E-25 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain P40_11190 566737f647d1c329fe8319067d6ccb2a 204 SUPERFAMILY SSF52266 22 198 3.51E-45 T 13-10-2018 P40_11190 566737f647d1c329fe8319067d6ccb2a 204 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 22 32 - T 13-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 P40_13795 bef929ef660938a7f6b38320f30b73c3 79 Pfam PF06305 Lipopolysaccharide assembly protein A domain 27 67 3.2E-6 T 13-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 P40_15325 73ce296b4491fdd8c61a13dc4d031363 489 Hamap MF_00186 Glycerol kinase [glpK]. 1 489 53.422 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 P40_15325 73ce296b4491fdd8c61a13dc4d031363 489 PIRSF PIRSF000538 1 489 2.6E-171 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 P40_15325 73ce296b4491fdd8c61a13dc4d031363 489 SUPERFAMILY SSF53067 251 488 3.24E-78 T 13-10-2018 P40_15325 73ce296b4491fdd8c61a13dc4d031363 489 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 2 488 3.5E-218 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 P40_15325 73ce296b4491fdd8c61a13dc4d031363 489 SUPERFAMILY SSF53067 2 251 1.3E-96 T 13-10-2018 P40_15325 73ce296b4491fdd8c61a13dc4d031363 489 Gene3D G3DSA:3.30.420.40 1 249 7.4E-108 T 13-10-2018 P40_15325 73ce296b4491fdd8c61a13dc4d031363 489 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 445 2.7E-53 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 P40_15325 73ce296b4491fdd8c61a13dc4d031363 489 Gene3D G3DSA:3.30.420.40 250 489 1.5E-85 T 13-10-2018 P40_15325 73ce296b4491fdd8c61a13dc4d031363 489 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 2 248 3.1E-78 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 P40_09665 c22e3fb12b3b13b474ef75303d7f88b1 565 Gene3D G3DSA:3.40.50.12780 18 447 1.1E-108 T 13-10-2018 P40_09665 c22e3fb12b3b13b474ef75303d7f88b1 565 Pfam PF13193 AMP-binding enzyme C-terminal domain 463 540 1.8E-21 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_09665 c22e3fb12b3b13b474ef75303d7f88b1 565 Gene3D G3DSA:3.30.300.310 450 555 7.0E-30 T 13-10-2018 P40_09665 c22e3fb12b3b13b474ef75303d7f88b1 565 Pfam PF00501 AMP-binding enzyme 31 454 8.0E-102 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_09665 c22e3fb12b3b13b474ef75303d7f88b1 565 SUPERFAMILY SSF56801 14 550 1.1E-150 T 13-10-2018 P40_09665 c22e3fb12b3b13b474ef75303d7f88b1 565 ProSitePatterns PS00455 Putative AMP-binding domain signature. 205 216 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_08975 70e0edc5d96eb630556bec8188b00b08 505 SUPERFAMILY SSF56801 4 502 4.97E-148 T 13-10-2018 P40_08975 70e0edc5d96eb630556bec8188b00b08 505 Pfam PF00501 AMP-binding enzyme 8 409 3.2E-99 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_08975 70e0edc5d96eb630556bec8188b00b08 505 Gene3D G3DSA:3.30.300.310 406 505 1.4E-32 T 13-10-2018 P40_08975 70e0edc5d96eb630556bec8188b00b08 505 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_08975 70e0edc5d96eb630556bec8188b00b08 505 Gene3D G3DSA:3.40.50.12780 1 403 4.9E-114 T 13-10-2018 P40_08975 70e0edc5d96eb630556bec8188b00b08 505 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 494 8.0E-20 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_20515 72adb33ead30a607795fa758acb9637e 377 Gene3D G3DSA:3.30.1540.10 216 304 4.1E-118 T 13-10-2018 P40_20515 72adb33ead30a607795fa758acb9637e 377 Gene3D G3DSA:3.40.50.10540 4 322 4.1E-118 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_20515 72adb33ead30a607795fa758acb9637e 377 Pfam PF02515 CoA-transferase family III 5 353 1.8E-86 T 13-10-2018 IPR003673 CoA-transferase family III GO:0003824 P40_20515 72adb33ead30a607795fa758acb9637e 377 SUPERFAMILY SSF89796 3 376 8.63E-119 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_03785 66b746ea3ff1acf05139c3e38c629724 347 SUPERFAMILY SSF53335 2 316 3.25E-48 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_03785 66b746ea3ff1acf05139c3e38c629724 347 Gene3D G3DSA:3.40.5.100 258 344 6.4E-19 T 13-10-2018 P40_03785 66b746ea3ff1acf05139c3e38c629724 347 Gene3D G3DSA:3.40.50.150 29 255 3.3E-66 T 13-10-2018 P40_03785 66b746ea3ff1acf05139c3e38c629724 347 Pfam PF13847 Methyltransferase domain 61 209 6.7E-29 T 13-10-2018 IPR025714 Methyltransferase domain P40_13280 4f05a590f0ad7dc56ef6f4f71d1eab47 211 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 187 7.0E-31 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel P40_20275 38557cf4c6420c45ebc9e64f3b35b522 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 238 245 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 P40_20275 38557cf4c6420c45ebc9e64f3b35b522 477 Gene3D G3DSA:3.40.309.10 243 436 1.2E-183 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_20275 38557cf4c6420c45ebc9e64f3b35b522 477 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 1 464 5.2E-202 T 13-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 P40_20275 38557cf4c6420c45ebc9e64f3b35b522 477 SUPERFAMILY SSF53720 1 469 1.96E-173 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_20275 38557cf4c6420c45ebc9e64f3b35b522 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 266 277 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 P40_20275 38557cf4c6420c45ebc9e64f3b35b522 477 Pfam PF00171 Aldehyde dehydrogenase family 8 466 8.0E-180 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_20275 38557cf4c6420c45ebc9e64f3b35b522 477 Gene3D G3DSA:3.40.605.10 1 464 1.2E-183 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_13085 5d5890a79005945ec13929fcb47739bd 512 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 369 389 - T 13-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site P40_13085 5d5890a79005945ec13929fcb47739bd 512 SUPERFAMILY SSF55729 6 140 9.12E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_13085 5d5890a79005945ec13929fcb47739bd 512 Gene3D G3DSA:3.60.110.10 221 506 1.8E-58 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P40_13085 5d5890a79005945ec13929fcb47739bd 512 Pfam PF00583 Acetyltransferase (GNAT) family 43 137 2.6E-6 T 13-10-2018 IPR000182 GNAT domain P40_13085 5d5890a79005945ec13929fcb47739bd 512 SUPERFAMILY SSF56317 221 487 7.72E-59 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P40_13085 5d5890a79005945ec13929fcb47739bd 512 Gene3D G3DSA:3.40.630.30 3 220 6.3E-51 T 13-10-2018 P40_13085 5d5890a79005945ec13929fcb47739bd 512 Pfam PF00795 Carbon-nitrogen hydrolase 224 481 6.2E-32 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 P40_21610 bc3695cb6c11bd6fbfab5a0bf6608897 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 193 274 7.2E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_21610 bc3695cb6c11bd6fbfab5a0bf6608897 314 Pfam PF01548 Transposase 10 149 7.6E-22 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_09175 74cafb1d701258cbb2f888c00940a083 262 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 20 247 2.2E-86 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 P40_09175 74cafb1d701258cbb2f888c00940a083 262 SUPERFAMILY SSF64005 18 243 3.14E-84 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 P40_09175 74cafb1d701258cbb2f888c00940a083 262 Pfam PF01255 Putative undecaprenyl diphosphate synthase 27 247 1.1E-77 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 P40_09175 74cafb1d701258cbb2f888c00940a083 262 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 20 248 39.892 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 P40_09175 74cafb1d701258cbb2f888c00940a083 262 Gene3D G3DSA:3.40.1180.10 10 248 6.3E-93 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 P40_09175 74cafb1d701258cbb2f888c00940a083 262 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 193 210 - T 13-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 P40_06725 089be1a6b08f156e4fabe45bde37751b 1076 SUPERFAMILY SSF50182 884 949 5.23E-16 T 13-10-2018 IPR010920 LSM domain superfamily P40_06725 089be1a6b08f156e4fabe45bde37751b 1076 SUPERFAMILY SSF82861 799 882 2.75E-7 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 P40_06725 089be1a6b08f156e4fabe45bde37751b 1076 Gene3D G3DSA:3.30.70.100 952 1045 6.6E-20 T 13-10-2018 P40_06725 089be1a6b08f156e4fabe45bde37751b 1076 SUPERFAMILY SSF82689 951 1050 2.09E-25 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 P40_06725 089be1a6b08f156e4fabe45bde37751b 1076 Gene3D G3DSA:2.30.30.60 899 948 5.8E-12 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily P40_06725 089be1a6b08f156e4fabe45bde37751b 1076 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 465 780 7.6E-88 T 13-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 P40_06725 089be1a6b08f156e4fabe45bde37751b 1076 Pfam PF12795 Mechanosensitive ion channel porin domain 18 244 1.7E-27 T 13-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain P40_06725 089be1a6b08f156e4fabe45bde37751b 1076 Pfam PF00924 Mechanosensitive ion channel 841 1040 4.3E-59 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 P40_06725 089be1a6b08f156e4fabe45bde37751b 1076 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 913 947 - T 13-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 P40_00035 c11647d5cefb98075afefac4c6d10d46 183 SUPERFAMILY SSF56784 1 178 1.52E-41 T 13-10-2018 IPR036412 HAD-like superfamily P40_00035 c11647d5cefb98075afefac4c6d10d46 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 147 9.0E-32 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 P40_00035 c11647d5cefb98075afefac4c6d10d46 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 145 5.2E-40 T 13-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 P40_00035 c11647d5cefb98075afefac4c6d10d46 183 Gene3D G3DSA:3.40.50.1000 1 177 4.0E-48 T 13-10-2018 IPR023214 HAD superfamily P40_00035 c11647d5cefb98075afefac4c6d10d46 183 PIRSF PIRSF004682 1 182 4.5E-51 T 13-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 P40_00035 c11647d5cefb98075afefac4c6d10d46 183 Pfam PF13242 HAD-hyrolase-like 101 157 7.6E-8 T 13-10-2018 P40_11945 67fecf1b4e0359c029dd6d089f2e9983 284 PRINTS PR01438 Universal stress protein signature 1 11 5.0E-11 T 13-10-2018 IPR006015 Universal stress protein A P40_11945 67fecf1b4e0359c029dd6d089f2e9983 284 PRINTS PR01438 Universal stress protein signature 244 256 5.0E-11 T 13-10-2018 IPR006015 Universal stress protein A P40_11945 67fecf1b4e0359c029dd6d089f2e9983 284 PRINTS PR01438 Universal stress protein signature 262 284 5.0E-11 T 13-10-2018 IPR006015 Universal stress protein A P40_11945 67fecf1b4e0359c029dd6d089f2e9983 284 Gene3D G3DSA:3.40.50.12370 2 284 2.3E-67 T 13-10-2018 P40_11945 67fecf1b4e0359c029dd6d089f2e9983 284 SUPERFAMILY SSF52402 167 284 4.55E-21 T 13-10-2018 P40_11945 67fecf1b4e0359c029dd6d089f2e9983 284 SUPERFAMILY SSF52402 1 158 2.51E-16 T 13-10-2018 P40_11945 67fecf1b4e0359c029dd6d089f2e9983 284 Pfam PF00582 Universal stress protein family 2 158 3.4E-11 T 13-10-2018 IPR006016 UspA P40_11945 67fecf1b4e0359c029dd6d089f2e9983 284 Pfam PF00582 Universal stress protein family 211 284 4.8E-11 T 13-10-2018 IPR006016 UspA P40_14580 a560bd086fa692d5e6b76bd0c6e2b5c7 107 Pfam PF07027 Protein of unknown function (DUF1318) 19 107 2.4E-33 T 13-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 P40_14580 a560bd086fa692d5e6b76bd0c6e2b5c7 107 PIRSF PIRSF025560 1 107 3.0E-35 T 13-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 P40_07555 a88916e3f4307d05157098a28ee06484 581 Pfam PF06980 Protein of unknown function (DUF1302) 32 581 2.6E-145 T 13-10-2018 IPR010727 Protein of unknown function DUF1302 P40_11940 eb84494e3d6e9ee5fe53e4450b2a6cd4 138 Pfam PF14347 Domain of unknown function (DUF4399) 47 138 9.0E-41 T 13-10-2018 IPR025512 Domain of unknown function DUF4399 P40_09825 a1ff8e14f96742d1b6e6836c59b80dc3 321 Gene3D G3DSA:3.40.50.1820 5 296 6.8E-57 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_09825 a1ff8e14f96742d1b6e6836c59b80dc3 321 SUPERFAMILY SSF53474 21 297 2.45E-46 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_09825 a1ff8e14f96742d1b6e6836c59b80dc3 321 Pfam PF12697 Alpha/beta hydrolase family 44 287 1.4E-17 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_07225 181a643c3e28f6c49ff75592e6703606 189 Pfam PF07977 FabA-like domain 46 175 4.1E-50 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 P40_07225 181a643c3e28f6c49ff75592e6703606 189 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 19 189 49.584 T 13-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 P40_07225 181a643c3e28f6c49ff75592e6703606 189 SUPERFAMILY SSF54637 20 187 1.99E-55 T 13-10-2018 IPR029069 HotDog domain superfamily P40_07225 181a643c3e28f6c49ff75592e6703606 189 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 21 188 8.9E-89 T 13-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 P40_07225 181a643c3e28f6c49ff75592e6703606 189 Gene3D G3DSA:3.10.129.10 19 189 2.0E-68 T 13-10-2018 P40_04340 dbd0d7398dd81ecc3d36f55613cef929 172 Gene3D G3DSA:3.40.220.10 1 168 3.5E-62 T 13-10-2018 P40_04340 dbd0d7398dd81ecc3d36f55613cef929 172 SUPERFAMILY SSF52949 4 168 3.03E-56 T 13-10-2018 P40_04340 dbd0d7398dd81ecc3d36f55613cef929 172 SMART SM00506 3 132 3.2E-44 T 13-10-2018 IPR002589 Macro domain P40_04340 dbd0d7398dd81ecc3d36f55613cef929 172 Pfam PF01661 Macro domain 21 132 2.0E-39 T 13-10-2018 IPR002589 Macro domain P40_03965 003d10f67ae7a07a54ef34cf1f1a5e57 264 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 3.1E-11 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal P40_03965 003d10f67ae7a07a54ef34cf1f1a5e57 264 SMART SM00382 29 237 1.2E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_03965 003d10f67ae7a07a54ef34cf1f1a5e57 264 Gene3D G3DSA:3.40.50.300 1 255 4.9E-60 T 13-10-2018 P40_03965 003d10f67ae7a07a54ef34cf1f1a5e57 264 Pfam PF00005 ABC transporter 21 180 7.6E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_03965 003d10f67ae7a07a54ef34cf1f1a5e57 264 SUPERFAMILY SSF52540 4 251 7.27E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_01960 c8b84074240de4fb4e249acfe13d99ef 275 Pfam PF00797 N-acetyltransferase 24 257 2.0E-72 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 P40_01960 c8b84074240de4fb4e249acfe13d99ef 275 Gene3D G3DSA:3.30.2140.10 6 252 5.9E-90 T 13-10-2018 P40_01960 c8b84074240de4fb4e249acfe13d99ef 275 Gene3D G3DSA:2.40.128.150 87 183 5.9E-90 T 13-10-2018 P40_01960 c8b84074240de4fb4e249acfe13d99ef 275 PRINTS PR01543 Arylamine N-acetyltransferase signature 104 129 4.3E-15 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 P40_01960 c8b84074240de4fb4e249acfe13d99ef 275 PRINTS PR01543 Arylamine N-acetyltransferase signature 23 46 4.3E-15 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 P40_01960 c8b84074240de4fb4e249acfe13d99ef 275 PRINTS PR01543 Arylamine N-acetyltransferase signature 47 70 4.3E-15 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 P40_01960 c8b84074240de4fb4e249acfe13d99ef 275 PRINTS PR01543 Arylamine N-acetyltransferase signature 71 93 4.3E-15 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 P40_01960 c8b84074240de4fb4e249acfe13d99ef 275 SUPERFAMILY SSF54001 3 259 3.53E-78 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily P40_19270 8c39da7dd8db15236f828dabab0e649e 224 SUPERFAMILY SSF142823 1 189 1.18E-46 T 13-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 P40_19270 8c39da7dd8db15236f828dabab0e649e 224 Gene3D G3DSA:3.90.1560.10 3 203 7.7E-45 T 13-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 P40_19270 8c39da7dd8db15236f828dabab0e649e 224 Pfam PF04029 2-phosphosulpholactate phosphatase 11 174 1.2E-43 T 13-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 P40_03495 23e19ae3944a4aa94a54841bcd9dffae 360 Gene3D G3DSA:3.30.1330.170 1 103 4.2E-36 T 13-10-2018 P40_03495 23e19ae3944a4aa94a54841bcd9dffae 360 Gene3D G3DSA:3.30.1330.180 104 250 5.7E-63 T 13-10-2018 P40_03495 23e19ae3944a4aa94a54841bcd9dffae 360 Gene3D G3DSA:3.30.1330.160 251 359 3.6E-41 T 13-10-2018 P40_03495 23e19ae3944a4aa94a54841bcd9dffae 360 Pfam PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) 5 355 2.0E-155 T 13-10-2018 IPR014086 Cyanuric acid hydrolase/Barbiturase GO:0016812 P40_03495 23e19ae3944a4aa94a54841bcd9dffae 360 TIGRFAM TIGR02714 amido_AtzD_TrzD: ring-opening amidohydrolases 5 356 2.3E-134 T 13-10-2018 IPR014086 Cyanuric acid hydrolase/Barbiturase GO:0016812 P40_03495 23e19ae3944a4aa94a54841bcd9dffae 360 Hamap MF_01989 Cyanuric acid amidohydrolase. 1 357 37.937 T 13-10-2018 IPR014086 Cyanuric acid hydrolase/Barbiturase GO:0016812 P40_02165 3441fd83b61da154a66573efb40f21a8 277 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 277 1.6E-90 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 P40_02165 3441fd83b61da154a66573efb40f21a8 277 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 86 1.8E-41 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 P40_02165 3441fd83b61da154a66573efb40f21a8 277 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.4E-41 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 P40_02165 3441fd83b61da154a66573efb40f21a8 277 PRINTS PR00108 Thymidylate synthase family signature 210 227 2.4E-41 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 P40_02165 3441fd83b61da154a66573efb40f21a8 277 PRINTS PR00108 Thymidylate synthase family signature 172 198 2.4E-41 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 P40_02165 3441fd83b61da154a66573efb40f21a8 277 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.4E-41 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 P40_02165 3441fd83b61da154a66573efb40f21a8 277 Pfam PF00303 Thymidylate synthase 2 277 7.5E-121 T 13-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 P40_02165 3441fd83b61da154a66573efb40f21a8 277 SUPERFAMILY SSF55831 1 277 3.53E-126 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 P40_02165 3441fd83b61da154a66573efb40f21a8 277 Gene3D G3DSA:3.30.572.10 1 277 1.6E-127 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 P40_02165 3441fd83b61da154a66573efb40f21a8 277 Hamap MF_00008 Thymidylate synthase [thyA]. 1 277 40.581 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 P40_19440 24e81f03c79b828bddad66b68471a76f 406 Gene3D G3DSA:1.25.40.10 245 401 5.1E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_19440 24e81f03c79b828bddad66b68471a76f 406 Gene3D G3DSA:1.25.40.10 70 222 2.1E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_19440 24e81f03c79b828bddad66b68471a76f 406 Pfam PF07219 HemY protein N-terminus 27 132 1.9E-20 T 13-10-2018 IPR010817 HemY, N-terminal P40_19440 24e81f03c79b828bddad66b68471a76f 406 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 387 1.7E-71 T 13-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 P40_19440 24e81f03c79b828bddad66b68471a76f 406 SUPERFAMILY SSF48452 91 390 3.63E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_14235 f426b870e077129af51094a074a5739c 155 Pfam PF02036 SCP-2 sterol transfer family 39 132 4.3E-11 T 13-10-2018 IPR003033 SCP2 sterol-binding domain P40_14235 f426b870e077129af51094a074a5739c 155 SUPERFAMILY SSF55718 48 135 2.77E-12 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily P40_20895 9b4f4ffe46b1760e807bf5f5747d7ef7 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 377 403 2.4E-14 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_20895 9b4f4ffe46b1760e807bf5f5747d7ef7 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 324 343 2.4E-14 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_20895 9b4f4ffe46b1760e807bf5f5747d7ef7 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 2.4E-14 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_20895 9b4f4ffe46b1760e807bf5f5747d7ef7 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 161 185 2.4E-14 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_20895 9b4f4ffe46b1760e807bf5f5747d7ef7 496 Pfam PF00361 Proton-conducting membrane transporter 126 415 2.4E-37 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P40_02105 f2db4e84fa872e9665a5578ca5a5f27e 140 SUPERFAMILY SSF52833 21 96 1.12E-6 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_02105 f2db4e84fa872e9665a5578ca5a5f27e 140 Pfam PF04214 Protein of unknown function, DUF 47 115 2.9E-32 T 13-10-2018 IPR007332 Protein of unknown function DUF411 P40_07490 be2d11fc53f14435c084974e0a207fe4 144 SUPERFAMILY SSF161084 14 132 6.8E-11 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily P40_07490 be2d11fc53f14435c084974e0a207fe4 144 Pfam PF01124 MAPEG family 8 132 2.0E-9 T 13-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein P40_07490 be2d11fc53f14435c084974e0a207fe4 144 Gene3D G3DSA:1.20.120.550 7 136 1.2E-7 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily P40_14420 55f3a5259a0ba72ac9ab98728a61049c 328 Pfam PF13310 Virulence protein RhuM family 62 132 1.6E-27 T 13-10-2018 IPR011204 Virulence protein RhuM-like P40_14420 55f3a5259a0ba72ac9ab98728a61049c 328 Pfam PF02661 Fic/DOC family 203 279 2.0E-9 T 13-10-2018 IPR003812 Fido domain P40_14420 55f3a5259a0ba72ac9ab98728a61049c 328 SUPERFAMILY SSF140931 246 283 1.1E-6 T 13-10-2018 IPR036597 Fido-like domain superfamily P40_14420 55f3a5259a0ba72ac9ab98728a61049c 328 Gene3D G3DSA:1.20.120.1870 204 325 4.1E-13 T 13-10-2018 P40_12875 90f7f3cb2e5f76023e8d99aed34ab3c6 291 SUPERFAMILY SSF53474 12 291 4.59E-51 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_12875 90f7f3cb2e5f76023e8d99aed34ab3c6 291 Gene3D G3DSA:3.40.50.1820 9 285 7.1E-57 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_12875 90f7f3cb2e5f76023e8d99aed34ab3c6 291 Pfam PF00561 alpha/beta hydrolase fold 38 161 1.0E-19 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_12875 90f7f3cb2e5f76023e8d99aed34ab3c6 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 6.8E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_12875 90f7f3cb2e5f76023e8d99aed34ab3c6 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 6.8E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_12875 90f7f3cb2e5f76023e8d99aed34ab3c6 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 6.8E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_01840 bbfaf5ea3a826e50a441e7808fbafd70 329 SUPERFAMILY SSF55781 146 311 1.37E-40 T 13-10-2018 P40_01840 bbfaf5ea3a826e50a441e7808fbafd70 329 Pfam PF01614 Bacterial transcriptional regulator 193 305 7.7E-26 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal P40_01840 bbfaf5ea3a826e50a441e7808fbafd70 329 Gene3D G3DSA:1.10.10.10 73 144 8.7E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_01840 bbfaf5ea3a826e50a441e7808fbafd70 329 Pfam PF09339 IclR helix-turn-helix domain 9 60 1.5E-14 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 P40_01840 bbfaf5ea3a826e50a441e7808fbafd70 329 SMART SM00346 7 102 6.4E-9 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 P40_01840 bbfaf5ea3a826e50a441e7808fbafd70 329 SUPERFAMILY SSF46785 77 148 7.4E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_01840 bbfaf5ea3a826e50a441e7808fbafd70 329 SUPERFAMILY SSF46785 8 75 2.98E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_01840 bbfaf5ea3a826e50a441e7808fbafd70 329 Gene3D G3DSA:3.30.450.40 155 313 5.8E-43 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_01840 bbfaf5ea3a826e50a441e7808fbafd70 329 Gene3D G3DSA:1.10.10.10 2 72 9.6E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_02085 4351f3ac09d3022d3a1c7618608a611e 242 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 151 163 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 P40_02085 4351f3ac09d3022d3a1c7618608a611e 242 Gene3D G3DSA:1.10.510.10 113 217 5.2E-7 T 13-10-2018 P40_02085 4351f3ac09d3022d3a1c7618608a611e 242 SUPERFAMILY SSF56112 25 232 2.6E-19 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_02085 4351f3ac09d3022d3a1c7618608a611e 242 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 60 174 4.9E-15 T 13-10-2018 P40_19000 f26565629bf19fdf5f90fc3b086cbb47 453 Gene3D G3DSA:2.30.40.10 26 428 1.1E-109 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_19000 f26565629bf19fdf5f90fc3b086cbb47 453 Pfam PF01979 Amidohydrolase family 57 407 9.0E-48 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P40_19000 f26565629bf19fdf5f90fc3b086cbb47 453 SUPERFAMILY SSF51556 60 377 1.27E-85 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_19000 f26565629bf19fdf5f90fc3b086cbb47 453 SUPERFAMILY SSF51338 21 452 3.09E-19 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_19000 f26565629bf19fdf5f90fc3b086cbb47 453 Gene3D G3DSA:3.20.20.140 61 378 1.1E-109 T 13-10-2018 P40_00890 52f2a33ec758a7d7325ab8720d394bee 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 13-10-2018 IPR018336 Ribonuclease PH, conserved site P40_00890 52f2a33ec758a7d7325ab8720d394bee 238 SUPERFAMILY SSF54211 1 181 5.57E-44 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P40_00890 52f2a33ec758a7d7325ab8720d394bee 238 SUPERFAMILY SSF55666 153 236 7.85E-24 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P40_00890 52f2a33ec758a7d7325ab8720d394bee 238 Gene3D G3DSA:3.30.230.70 10 237 7.5E-62 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P40_00890 52f2a33ec758a7d7325ab8720d394bee 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 223 1.2E-7 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P40_00890 52f2a33ec758a7d7325ab8720d394bee 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.3E-22 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P40_00890 52f2a33ec758a7d7325ab8720d394bee 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 2.1E-113 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 P40_00890 52f2a33ec758a7d7325ab8720d394bee 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.238 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 P40_16270 0c3f7bb1eb0deeb50e6ddd7264a12590 432 SUPERFAMILY SSF103473 10 426 2.09E-36 T 13-10-2018 IPR036259 MFS transporter superfamily P40_16270 0c3f7bb1eb0deeb50e6ddd7264a12590 432 Pfam PF07690 Major Facilitator Superfamily 15 381 3.8E-25 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_16270 0c3f7bb1eb0deeb50e6ddd7264a12590 432 Gene3D G3DSA:1.20.1250.20 232 428 1.4E-14 T 13-10-2018 P40_16270 0c3f7bb1eb0deeb50e6ddd7264a12590 432 Gene3D G3DSA:1.20.1250.20 7 204 1.2E-10 T 13-10-2018 P40_10430 353278b49c6391d44402c9810ae35467 335 Pfam PF12833 Helix-turn-helix domain 255 331 2.5E-13 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_10430 353278b49c6391d44402c9810ae35467 335 SMART SM00342 247 330 1.8E-14 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_10430 353278b49c6391d44402c9810ae35467 335 Gene3D G3DSA:1.10.10.60 227 333 4.8E-19 T 13-10-2018 P40_10430 353278b49c6391d44402c9810ae35467 335 SUPERFAMILY SSF46689 287 332 1.52E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_10430 353278b49c6391d44402c9810ae35467 335 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 45 204 2.5E-17 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_10430 353278b49c6391d44402c9810ae35467 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 9.7E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_10430 353278b49c6391d44402c9810ae35467 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 9.7E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_01400 ae010f7ffd46b21706470ffa98150b85 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 P40_01400 ae010f7ffd46b21706470ffa98150b85 128 SUPERFAMILY SSF51230 4 126 2.05E-46 T 13-10-2018 IPR011053 Single hybrid motif P40_01400 ae010f7ffd46b21706470ffa98150b85 128 Pfam PF01597 Glycine cleavage H-protein 8 126 1.1E-47 T 13-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate P40_01400 ae010f7ffd46b21706470ffa98150b85 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 41.928 T 13-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 P40_01400 ae010f7ffd46b21706470ffa98150b85 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 2.8E-52 T 13-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 P40_01400 ae010f7ffd46b21706470ffa98150b85 128 Gene3D G3DSA:2.40.50.100 2 128 1.9E-51 T 13-10-2018 P40_11040 32b4a5ef388b879ad1c516200e4e5c3d 142 SMART SM00422 1 70 2.5E-20 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_11040 32b4a5ef388b879ad1c516200e4e5c3d 142 Pfam PF13411 MerR HTH family regulatory protein 1 68 2.5E-15 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_11040 32b4a5ef388b879ad1c516200e4e5c3d 142 SUPERFAMILY SSF46955 1 112 3.66E-27 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_11040 32b4a5ef388b879ad1c516200e4e5c3d 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 6.9E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_11040 32b4a5ef388b879ad1c516200e4e5c3d 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.9E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_11040 32b4a5ef388b879ad1c516200e4e5c3d 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.9E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_11040 32b4a5ef388b879ad1c516200e4e5c3d 142 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_11040 32b4a5ef388b879ad1c516200e4e5c3d 142 Gene3D G3DSA:1.10.1660.10 1 123 1.6E-27 T 13-10-2018 P40_19365 d8313ff1d0446572db6ee4b5393cecf5 72 SUPERFAMILY SSF143800 1 67 4.71E-27 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_19365 d8313ff1d0446572db6ee4b5393cecf5 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 4.1E-31 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_19365 d8313ff1d0446572db6ee4b5393cecf5 72 PRINTS PR01249 Ribosomal protein L31 signature 46 64 6.0E-21 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_19365 d8313ff1d0446572db6ee4b5393cecf5 72 PRINTS PR01249 Ribosomal protein L31 signature 31 46 6.0E-21 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_19365 d8313ff1d0446572db6ee4b5393cecf5 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 6.0E-21 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_19365 d8313ff1d0446572db6ee4b5393cecf5 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_19365 d8313ff1d0446572db6ee4b5393cecf5 72 Pfam PF01197 Ribosomal protein L31 1 65 8.3E-31 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_19365 d8313ff1d0446572db6ee4b5393cecf5 72 Gene3D G3DSA:2.30.170.50 1 70 3.4E-31 T 13-10-2018 P40_19365 d8313ff1d0446572db6ee4b5393cecf5 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 28.094 T 13-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_04175 7ebb847d92b892d764c07ddac57a2c54 132 Pfam PF06339 Ectoine synthase 1 129 1.0E-53 T 13-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 P40_04175 7ebb847d92b892d764c07ddac57a2c54 132 SUPERFAMILY SSF51182 9 130 6.41E-17 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_04175 7ebb847d92b892d764c07ddac57a2c54 132 Hamap MF_01255 L-ectoine synthase [ectC]. 1 131 34.158 T 13-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 P40_04175 7ebb847d92b892d764c07ddac57a2c54 132 Gene3D G3DSA:2.60.120.10 1 119 1.5E-38 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_04175 7ebb847d92b892d764c07ddac57a2c54 132 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 121 1.0E-37 T 13-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 P40_11140 b02e78cb4c2261208c884a651d8b5f65 207 Pfam PF01300 Telomere recombination 23 199 1.3E-42 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 P40_11140 b02e78cb4c2261208c884a651d8b5f65 207 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 1.4E-60 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 P40_11140 b02e78cb4c2261208c884a651d8b5f65 207 SUPERFAMILY SSF55821 1 205 3.36E-62 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily P40_11140 b02e78cb4c2261208c884a651d8b5f65 207 Gene3D G3DSA:3.90.870.10 2 206 9.5E-63 T 13-10-2018 P40_10825 b8a00db3eeeff68d3e581a5da4fcacca 74 Pfam PF11174 Protein of unknown function (DUF2970) 14 69 3.9E-21 T 13-10-2018 IPR021344 Protein of unknown function DUF2970 P40_08925 24004743e2fea9a152feb2a917013379 112 Pfam PF09842 Predicted membrane protein (DUF2069) 6 106 5.9E-22 T 13-10-2018 IPR018643 Protein of unknown function DUF2069, membrane P40_07085 67749dabefc267fcdbd9af95510ae583 543 SUPERFAMILY SSF56425 233 348 2.39E-43 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_07085 67749dabefc267fcdbd9af95510ae583 543 PIRSF PIRSF000171 1 527 7.6E-34 T 13-10-2018 P40_07085 67749dabefc267fcdbd9af95510ae583 543 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 6 515 1.5E-197 T 13-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 P40_07085 67749dabefc267fcdbd9af95510ae583 543 Gene3D G3DSA:3.50.50.60 7 399 2.9E-159 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_07085 67749dabefc267fcdbd9af95510ae583 543 Gene3D G3DSA:3.90.700.10 243 353 2.9E-159 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_07085 67749dabefc267fcdbd9af95510ae583 543 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 372 2.2E-8 T 13-10-2018 P40_07085 67749dabefc267fcdbd9af95510ae583 543 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.2E-8 T 13-10-2018 P40_07085 67749dabefc267fcdbd9af95510ae583 543 SUPERFAMILY SSF51905 3 443 1.18E-75 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_07085 67749dabefc267fcdbd9af95510ae583 543 Pfam PF02910 Fumarate reductase flavoprotein C-term 436 519 7.0E-13 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_07085 67749dabefc267fcdbd9af95510ae583 543 SUPERFAMILY SSF46977 423 520 2.22E-28 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_07085 67749dabefc267fcdbd9af95510ae583 543 Gene3D G3DSA:1.20.58.100 420 533 3.5E-38 T 13-10-2018 P40_07085 67749dabefc267fcdbd9af95510ae583 543 Pfam PF00890 FAD binding domain 7 387 1.1E-100 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_00415 36deb320eb984cc809dc75d64ff864a9 177 Pfam PF13590 Domain of unknown function (DUF4136) 21 172 4.8E-24 T 13-10-2018 IPR025411 Domain of unknown function DUF4136 P40_00415 36deb320eb984cc809dc75d64ff864a9 177 Gene3D G3DSA:3.30.160.670 18 173 4.2E-17 T 13-10-2018 P40_07635 8040e5a7666359a1b2d7add621d383a4 225 Gene3D G3DSA:3.40.50.1240 1 221 2.3E-36 T 13-10-2018 IPR029033 Histidine phosphatase superfamily P40_07635 8040e5a7666359a1b2d7add621d383a4 225 SMART SM00855 3 168 2.8E-10 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_07635 8040e5a7666359a1b2d7add621d383a4 225 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 208 7.1E-23 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_07635 8040e5a7666359a1b2d7add621d383a4 225 SUPERFAMILY SSF53254 1 218 8.77E-39 T 13-10-2018 IPR029033 Histidine phosphatase superfamily P40_11735 ee1e3e56a253cdceebfea069f6f9bc68 213 Pfam PF01553 Acyltransferase 51 163 1.7E-11 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_11735 ee1e3e56a253cdceebfea069f6f9bc68 213 SUPERFAMILY SSF69593 32 185 1.15E-16 T 13-10-2018 P40_11735 ee1e3e56a253cdceebfea069f6f9bc68 213 SMART SM00563 52 164 1.0E-15 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_20855 866f960a86c7aa51f167e6b4080d11ab 278 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 59 252 2.0E-17 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase P40_20855 866f960a86c7aa51f167e6b4080d11ab 278 SUPERFAMILY SSF56219 19 256 1.96E-35 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily P40_20855 866f960a86c7aa51f167e6b4080d11ab 278 Gene3D G3DSA:3.60.10.10 20 268 7.5E-39 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily P40_15320 066873f71905a084a1efe833929a3017 362 SUPERFAMILY SSF55073 207 358 1.88E-43 T 13-10-2018 IPR029787 Nucleotide cyclase P40_15320 066873f71905a084a1efe833929a3017 362 Pfam PF00990 Diguanylate cyclase, GGDEF domain 202 357 1.3E-41 T 13-10-2018 IPR000160 GGDEF domain P40_15320 066873f71905a084a1efe833929a3017 362 Gene3D G3DSA:3.30.70.270 188 360 4.9E-51 T 13-10-2018 P40_15320 066873f71905a084a1efe833929a3017 362 SMART SM00267 191 361 2.2E-50 T 13-10-2018 IPR000160 GGDEF domain P40_15320 066873f71905a084a1efe833929a3017 362 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 201 358 1.6E-41 T 13-10-2018 IPR000160 GGDEF domain P40_03075 750152031a4d342d51a849b5ac6a4547 402 Gene3D G3DSA:3.50.50.60 9 61 4.4E-9 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_03075 750152031a4d342d51a849b5ac6a4547 402 Pfam PF01266 FAD dependent oxidoreductase 9 307 6.5E-7 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 P40_03075 750152031a4d342d51a849b5ac6a4547 402 SUPERFAMILY SSF51905 8 307 9.88E-13 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_16830 9ac1d0fc794445ced0ac73e3d916d962 442 SUPERFAMILY SSF46565 1 46 2.88E-6 T 13-10-2018 IPR036869 Chaperone J-domain superfamily P40_16830 9ac1d0fc794445ced0ac73e3d916d962 442 Gene3D G3DSA:1.10.287.110 1 59 1.1E-5 T 13-10-2018 IPR036869 Chaperone J-domain superfamily P40_16830 9ac1d0fc794445ced0ac73e3d916d962 442 Pfam PF06271 RDD family 294 424 5.2E-13 T 13-10-2018 IPR010432 RDD P40_16230 74db5a14adef702dcd3039f7531ca68b 749 Pfam PF00884 Sulfatase 40 494 3.7E-34 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 P40_16230 74db5a14adef702dcd3039f7531ca68b 749 SUPERFAMILY SSF53649 39 639 4.69E-58 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 P40_16230 74db5a14adef702dcd3039f7531ca68b 749 ProSitePatterns PS00149 Sulfatases signature 2. 138 148 - T 13-10-2018 IPR024607 Sulfatase, conserved site P40_16230 74db5a14adef702dcd3039f7531ca68b 749 ProSitePatterns PS00018 EF-hand calcium-binding domain. 692 704 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site P40_14110 f4088f2ba4291f2704e120906a96c15f 392 Pfam PF02803 Thiolase, C-terminal domain 271 391 9.5E-52 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_14110 f4088f2ba4291f2704e120906a96c15f 392 SUPERFAMILY SSF53901 3 270 7.44E-90 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_14110 f4088f2ba4291f2704e120906a96c15f 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 P40_14110 f4088f2ba4291f2704e120906a96c15f 392 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 P40_14110 f4088f2ba4291f2704e120906a96c15f 392 Pfam PF00108 Thiolase, N-terminal domain 4 262 3.6E-107 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 P40_14110 f4088f2ba4291f2704e120906a96c15f 392 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 P40_14110 f4088f2ba4291f2704e120906a96c15f 392 Gene3D G3DSA:3.40.47.10 126 389 2.9E-156 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_14110 f4088f2ba4291f2704e120906a96c15f 392 SUPERFAMILY SSF53901 272 392 9.77E-45 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_14110 f4088f2ba4291f2704e120906a96c15f 392 Gene3D G3DSA:3.40.47.10 6 276 2.9E-156 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_14110 f4088f2ba4291f2704e120906a96c15f 392 PIRSF PIRSF000429 1 392 5.8E-132 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_14110 f4088f2ba4291f2704e120906a96c15f 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 3.4E-148 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_04705 52cffce3990f2c418a1ac69041eabec3 179 Gene3D G3DSA:3.90.1720.10 57 178 2.1E-42 T 13-10-2018 P40_04705 52cffce3990f2c418a1ac69041eabec3 179 Pfam PF00877 NlpC/P60 family 70 174 2.1E-31 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain P40_04705 52cffce3990f2c418a1ac69041eabec3 179 SUPERFAMILY SSF54001 53 175 8.34E-42 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily P40_15490 9a41718555dde329dfef06e0b70d0594 292 Gene3D G3DSA:1.10.3720.10 63 277 6.6E-21 T 13-10-2018 IPR035906 MetI-like superfamily P40_15490 9a41718555dde329dfef06e0b70d0594 292 SUPERFAMILY SSF161098 69 257 3.05E-25 T 13-10-2018 IPR035906 MetI-like superfamily P40_15490 9a41718555dde329dfef06e0b70d0594 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 276 5.1E-27 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_07725 be9d65ba79f303e0966626d797acd5c9 631 Gene3D G3DSA:2.140.10.10 43 624 3.6E-246 T 13-10-2018 P40_07725 be9d65ba79f303e0966626d797acd5c9 631 SUPERFAMILY SSF50998 52 617 6.54E-146 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily P40_07725 be9d65ba79f303e0966626d797acd5c9 631 Pfam PF13360 PQQ-like domain 89 259 8.0E-16 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_07725 be9d65ba79f303e0966626d797acd5c9 631 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 290 311 - T 13-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 P40_07725 be9d65ba79f303e0966626d797acd5c9 631 SMART SM00564 205 243 190.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_07725 be9d65ba79f303e0966626d797acd5c9 631 SMART SM00564 105 137 2.1E-4 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_07725 be9d65ba79f303e0966626d797acd5c9 631 SMART SM00564 155 186 4.8E-5 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_07725 be9d65ba79f303e0966626d797acd5c9 631 SMART SM00564 535 566 6.3E-7 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_07725 be9d65ba79f303e0966626d797acd5c9 631 SMART SM00564 460 525 46.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P40_07725 be9d65ba79f303e0966626d797acd5c9 631 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 42 594 1.0E-233 T 13-10-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 P40_07725 be9d65ba79f303e0966626d797acd5c9 631 Pfam PF01011 PQQ enzyme repeat 540 576 1.5E-9 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P40_03010 64f685196d863572a4176d6852669e97 368 Gene3D G3DSA:3.40.50.2000 166 328 1.5E-97 T 13-10-2018 P40_03010 64f685196d863572a4176d6852669e97 368 Pfam PF00534 Glycosyl transferases group 1 182 329 2.7E-27 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 P40_03010 64f685196d863572a4176d6852669e97 368 Gene3D G3DSA:3.40.50.2000 12 165 1.5E-97 T 13-10-2018 P40_03010 64f685196d863572a4176d6852669e97 368 SUPERFAMILY SSF53756 2 334 2.86E-54 T 13-10-2018 P40_18105 997a37abe1e7ee746443e974378f3161 156 SUPERFAMILY SSF55136 3 147 7.32E-14 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily P40_18105 997a37abe1e7ee746443e974378f3161 156 Gene3D G3DSA:3.20.80.10 1 156 3.1E-38 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily P40_18105 997a37abe1e7ee746443e974378f3161 156 SMART SM00871 2 156 2.9E-22 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding P40_18105 997a37abe1e7ee746443e974378f3161 156 Pfam PF14526 Integron-associated effector binding protein 5 155 3.7E-21 T 13-10-2018 IPR029441 Integron-associated effector binding protein P40_20805 c9029e0f1150955b874d43b66fd1bdcb 224 Gene3D G3DSA:3.40.50.880 2 222 1.1E-74 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_20805 c9029e0f1150955b874d43b66fd1bdcb 224 Pfam PF01965 DJ-1/PfpI family 29 219 1.1E-11 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 P40_20805 c9029e0f1150955b874d43b66fd1bdcb 224 SUPERFAMILY SSF52317 5 221 4.94E-60 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_07795 a867597ad86dd9bc8676d26336fbe910 558 Pfam PF13193 AMP-binding enzyme C-terminal domain 463 540 3.6E-18 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_07795 a867597ad86dd9bc8676d26336fbe910 558 Gene3D G3DSA:3.30.300.310 450 555 3.7E-28 T 13-10-2018 P40_07795 a867597ad86dd9bc8676d26336fbe910 558 Gene3D G3DSA:3.40.50.12780 9 449 6.4E-118 T 13-10-2018 P40_07795 a867597ad86dd9bc8676d26336fbe910 558 Pfam PF00501 AMP-binding enzyme 31 453 2.1E-104 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_07795 a867597ad86dd9bc8676d26336fbe910 558 ProSitePatterns PS00455 Putative AMP-binding domain signature. 204 215 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_07795 a867597ad86dd9bc8676d26336fbe910 558 SUPERFAMILY SSF56801 15 552 2.09E-149 T 13-10-2018 P40_03725 5b377b98f65e23a64c56e022d683f106 103 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 5 100 5.6E-24 T 13-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 P40_03725 5b377b98f65e23a64c56e022d683f106 103 SUPERFAMILY SSF50249 4 103 2.3E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_03725 5b377b98f65e23a64c56e022d683f106 103 Gene3D G3DSA:2.40.50.140 4 103 1.4E-22 T 13-10-2018 P40_03725 5b377b98f65e23a64c56e022d683f106 103 PIRSF PIRSF003135 1 102 1.8E-16 T 13-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 P40_11730 252eb2c7b22ac1dd1613bb7a3be61178 726 SUPERFAMILY SSF56935 10 726 6.41E-97 T 13-10-2018 P40_11730 252eb2c7b22ac1dd1613bb7a3be61178 726 Pfam PF00593 TonB dependent receptor 235 725 1.1E-29 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_11730 252eb2c7b22ac1dd1613bb7a3be61178 726 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 35 725 5.9E-92 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 P40_11730 252eb2c7b22ac1dd1613bb7a3be61178 726 Pfam PF07715 TonB-dependent Receptor Plug Domain 33 135 9.2E-19 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_11730 252eb2c7b22ac1dd1613bb7a3be61178 726 Gene3D G3DSA:2.170.130.10 14 140 3.2E-23 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_11730 252eb2c7b22ac1dd1613bb7a3be61178 726 Gene3D G3DSA:2.40.170.20 152 726 8.1E-54 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_21295 baa03aebdbbf3a45b0cf9764d0e56d0f 376 Gene3D G3DSA:3.40.190.170 46 351 3.0E-132 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_21295 baa03aebdbbf3a45b0cf9764d0e56d0f 376 Gene3D G3DSA:3.40.190.10 165 337 3.0E-132 T 13-10-2018 P40_21295 baa03aebdbbf3a45b0cf9764d0e56d0f 376 PIRSF PIRSF039026 1 370 3.6E-137 T 13-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like P40_21295 baa03aebdbbf3a45b0cf9764d0e56d0f 376 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 50 334 1.1E-63 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_04590 68b733dcd05a60e06ee04c0ce91a794a 149 Gene3D G3DSA:1.10.10.410 92 148 1.2E-19 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal P40_04590 68b733dcd05a60e06ee04c0ce91a794a 149 Gene3D G3DSA:1.10.1510.10 1 91 1.1E-23 T 13-10-2018 P40_04590 68b733dcd05a60e06ee04c0ce91a794a 149 Pfam PF09424 Yqey-like protein 5 147 7.6E-53 T 13-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 P40_04590 68b733dcd05a60e06ee04c0ce91a794a 149 SUPERFAMILY SSF89095 4 147 6.8E-42 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 P40_08535 5961f04094d6e877389aa8356ddd3f4a 609 Pfam PF00501 AMP-binding enzyme 48 474 7.1E-67 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_08535 5961f04094d6e877389aa8356ddd3f4a 609 Gene3D G3DSA:3.40.50.12780 30 467 1.1E-67 T 13-10-2018 P40_08535 5961f04094d6e877389aa8356ddd3f4a 609 ProSitePatterns PS00455 Putative AMP-binding domain signature. 214 225 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_08535 5961f04094d6e877389aa8356ddd3f4a 609 Pfam PF13193 AMP-binding enzyme C-terminal domain 483 561 2.1E-5 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_08535 5961f04094d6e877389aa8356ddd3f4a 609 SUPERFAMILY SSF56801 48 573 2.22E-98 T 13-10-2018 P40_08535 5961f04094d6e877389aa8356ddd3f4a 609 Gene3D G3DSA:3.30.300.30 469 573 2.8E-9 T 13-10-2018 P40_16455 05ab4c243cacdeb7fe258d9a7d4fc8ee 441 Pfam PF02875 Mur ligase family, glutamate ligase domain 299 370 3.7E-8 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 P40_16455 05ab4c243cacdeb7fe258d9a7d4fc8ee 441 Pfam PF08245 Mur ligase middle domain 111 278 4.9E-24 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 P40_16455 05ab4c243cacdeb7fe258d9a7d4fc8ee 441 Gene3D G3DSA:3.90.190.20 298 435 1.5E-43 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 P40_16455 05ab4c243cacdeb7fe258d9a7d4fc8ee 441 SUPERFAMILY SSF53623 96 292 2.75E-47 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 P40_16455 05ab4c243cacdeb7fe258d9a7d4fc8ee 441 SUPERFAMILY SSF51984 8 95 3.01E-12 T 13-10-2018 P40_16455 05ab4c243cacdeb7fe258d9a7d4fc8ee 441 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 5 438 33.392 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 P40_16455 05ab4c243cacdeb7fe258d9a7d4fc8ee 441 Gene3D G3DSA:3.40.50.720 3 94 3.0E-17 T 13-10-2018 P40_16455 05ab4c243cacdeb7fe258d9a7d4fc8ee 441 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 436 2.0E-122 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 P40_16455 05ab4c243cacdeb7fe258d9a7d4fc8ee 441 Gene3D G3DSA:3.40.1190.10 95 297 8.3E-61 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 P40_16455 05ab4c243cacdeb7fe258d9a7d4fc8ee 441 SUPERFAMILY SSF53244 297 437 6.04E-45 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 P40_16380 9c76ecdb508d1423328b7edced9b201b 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 195 26.867 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 P40_16380 9c76ecdb508d1423328b7edced9b201b 201 SUPERFAMILY SSF52540 1 196 1.68E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_16380 9c76ecdb508d1423328b7edced9b201b 201 Pfam PF01121 Dephospho-CoA kinase 2 178 2.1E-63 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 P40_16380 9c76ecdb508d1423328b7edced9b201b 201 Gene3D G3DSA:3.40.50.300 1 200 4.3E-69 T 13-10-2018 P40_16380 9c76ecdb508d1423328b7edced9b201b 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 187 3.0E-53 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 P40_04200 e227aa5748b74f12f311ab5c0b881a6a 295 SUPERFAMILY SSF48452 180 262 4.13E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_04200 e227aa5748b74f12f311ab5c0b881a6a 295 SMART SM00028 232 265 3.1 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_04200 e227aa5748b74f12f311ab5c0b881a6a 295 SMART SM00028 198 231 28.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_04200 e227aa5748b74f12f311ab5c0b881a6a 295 Gene3D G3DSA:1.25.40.10 144 277 2.6E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_11870 859751fa8e4e4a6f915436bbb8049b49 655 Gene3D G3DSA:3.40.50.12780 68 508 2.4E-60 T 13-10-2018 P40_11870 859751fa8e4e4a6f915436bbb8049b49 655 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 40 95 9.8E-8 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 P40_11870 859751fa8e4e4a6f915436bbb8049b49 655 Gene3D G3DSA:3.30.300.30 528 652 7.6E-17 T 13-10-2018 P40_11870 859751fa8e4e4a6f915436bbb8049b49 655 SUPERFAMILY SSF56801 24 645 2.09E-125 T 13-10-2018 P40_11870 859751fa8e4e4a6f915436bbb8049b49 655 Pfam PF13193 AMP-binding enzyme C-terminal domain 545 617 6.3E-7 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_11870 859751fa8e4e4a6f915436bbb8049b49 655 Pfam PF00501 AMP-binding enzyme 99 529 1.8E-46 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_11870 859751fa8e4e4a6f915436bbb8049b49 655 ProSitePatterns PS00455 Putative AMP-binding domain signature. 266 277 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_11870 859751fa8e4e4a6f915436bbb8049b49 655 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 6 653 1.5E-254 T 13-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 P40_12610 d311ba9e16dbe3f34f10156ead5166a8 272 Gene3D G3DSA:3.90.226.10 2 212 3.4E-61 T 13-10-2018 P40_12610 d311ba9e16dbe3f34f10156ead5166a8 272 Gene3D G3DSA:1.10.12.10 218 271 3.6E-12 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_12610 d311ba9e16dbe3f34f10156ead5166a8 272 SUPERFAMILY SSF52096 1 271 1.01E-73 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_12610 d311ba9e16dbe3f34f10156ead5166a8 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 271 7.8E-49 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_19705 00297e08654bd3d14622fb88a100a4ea 166 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 153 1.5E-30 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_15870 acfb32825152af1a3162d0ccfac3259f 533 PIRSF PIRSF001362 415 532 8.6E-6 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 P40_15870 acfb32825152af1a3162d0ccfac3259f 533 PIRSF PIRSF001362 293 410 2.8E-12 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 P40_15870 acfb32825152af1a3162d0ccfac3259f 533 PIRSF PIRSF001362 1 291 3.3E-29 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 P40_15870 acfb32825152af1a3162d0ccfac3259f 533 SUPERFAMILY SSF51621 7 514 6.28E-123 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 P40_15870 acfb32825152af1a3162d0ccfac3259f 533 Pfam PF00463 Isocitrate lyase family 442 530 1.6E-12 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 P40_15870 acfb32825152af1a3162d0ccfac3259f 533 Pfam PF00463 Isocitrate lyase family 317 391 2.5E-10 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 P40_15870 acfb32825152af1a3162d0ccfac3259f 533 Pfam PF00463 Isocitrate lyase family 97 268 7.3E-19 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 P40_15870 acfb32825152af1a3162d0ccfac3259f 533 Gene3D G3DSA:3.20.20.60 415 531 5.5E-19 T 13-10-2018 P40_00760 fb74860b9d36e73d31a267b6b9e90a2e 300 SUPERFAMILY SSF53850 90 292 1.43E-37 T 13-10-2018 P40_00760 fb74860b9d36e73d31a267b6b9e90a2e 300 Pfam PF03466 LysR substrate binding domain 87 293 6.6E-42 T 13-10-2018 IPR005119 LysR, substrate-binding P40_00760 fb74860b9d36e73d31a267b6b9e90a2e 300 SUPERFAMILY SSF46785 1 87 1.82E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_00760 fb74860b9d36e73d31a267b6b9e90a2e 300 Gene3D G3DSA:3.40.190.10 161 268 4.5E-76 T 13-10-2018 P40_00760 fb74860b9d36e73d31a267b6b9e90a2e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_00760 fb74860b9d36e73d31a267b6b9e90a2e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.6E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_00760 fb74860b9d36e73d31a267b6b9e90a2e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.6E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_00760 fb74860b9d36e73d31a267b6b9e90a2e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.6E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_00760 fb74860b9d36e73d31a267b6b9e90a2e 300 Gene3D G3DSA:1.10.10.10 1 85 4.1E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_00760 fb74860b9d36e73d31a267b6b9e90a2e 300 Gene3D G3DSA:3.40.190.10 92 291 4.5E-76 T 13-10-2018 P40_15375 31064a5fe9e5dee42a4adede97122a48 339 Gene3D G3DSA:1.10.10.60 234 332 1.9E-23 T 13-10-2018 P40_15375 31064a5fe9e5dee42a4adede97122a48 339 Pfam PF12833 Helix-turn-helix domain 250 327 4.0E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_15375 31064a5fe9e5dee42a4adede97122a48 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 38 203 1.8E-36 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_15375 31064a5fe9e5dee42a4adede97122a48 339 SMART SM00342 244 326 2.9E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_15375 31064a5fe9e5dee42a4adede97122a48 339 SUPERFAMILY SSF46689 279 330 1.97E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_12375 e962ad67163f6788a828d25cdcaf66d3 226 Gene3D G3DSA:3.40.50.2300 1 121 4.9E-33 T 13-10-2018 P40_12375 e962ad67163f6788a828d25cdcaf66d3 226 Pfam PF00072 Response regulator receiver domain 3 113 9.1E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_12375 e962ad67163f6788a828d25cdcaf66d3 226 SMART SM00862 146 220 8.9E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_12375 e962ad67163f6788a828d25cdcaf66d3 226 SMART SM00448 1 113 2.8E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_12375 e962ad67163f6788a828d25cdcaf66d3 226 Gene3D G3DSA:1.10.10.10 122 226 1.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_12375 e962ad67163f6788a828d25cdcaf66d3 226 SUPERFAMILY SSF52172 2 172 9.96E-35 T 13-10-2018 IPR011006 CheY-like superfamily P40_12375 e962ad67163f6788a828d25cdcaf66d3 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 2.1E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_14795 3f8450ccde0b72545e0caf92db754793 428 Pfam PF13520 Amino acid permease 2 382 1.4E-30 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 P40_14795 3f8450ccde0b72545e0caf92db754793 428 Gene3D G3DSA:1.20.1740.10 1 425 2.9E-71 T 13-10-2018 P40_14795 3f8450ccde0b72545e0caf92db754793 428 PIRSF PIRSF006060 1 428 1.0E-53 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 P40_04910 d7af33297152353c656227c31d7dc235 208 SUPERFAMILY SSF48452 59 177 1.77E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_04910 d7af33297152353c656227c31d7dc235 208 Pfam PF13432 Tetratricopeptide repeat 136 184 3.0E-5 T 13-10-2018 P40_04910 d7af33297152353c656227c31d7dc235 208 Gene3D G3DSA:1.25.40.10 23 203 7.4E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_10955 36fa1b4a27252c3ba59fe1d4858ff2bd 187 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 11 176 2.3E-29 T 13-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like P40_10955 36fa1b4a27252c3ba59fe1d4858ff2bd 187 SUPERFAMILY SSF51197 10 178 4.67E-57 T 13-10-2018 P40_10955 36fa1b4a27252c3ba59fe1d4858ff2bd 187 Gene3D G3DSA:2.60.120.590 5 183 2.0E-55 T 13-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily P40_04060 a8d48a561c29c0f2765e8170c15967be 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 156 30.962 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_04060 a8d48a561c29c0f2765e8170c15967be 156 SUPERFAMILY SSF52121 7 156 1.7E-59 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_04060 a8d48a561c29c0f2765e8170c15967be 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 153 2.2E-57 T 13-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_04060 a8d48a561c29c0f2765e8170c15967be 156 Gene3D G3DSA:3.40.50.960 4 156 3.8E-60 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_04060 a8d48a561c29c0f2765e8170c15967be 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 152 3.3E-56 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P40_08785 f59b54dd7459d8b3cb87814b148b6a6a 221 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 1 205 34.866 T 13-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 P40_08785 f59b54dd7459d8b3cb87814b148b6a6a 221 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 205 2.4E-100 T 13-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 P40_08785 f59b54dd7459d8b3cb87814b148b6a6a 221 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 192 1.9E-60 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 P40_08785 f59b54dd7459d8b3cb87814b148b6a6a 221 PIRSF PIRSF006102 1 210 4.8E-66 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 P40_05825 f57fe747cae4e001b0a2c571d115bbcd 318 SUPERFAMILY SSF51182 38 72 7.32E-5 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_05825 f57fe747cae4e001b0a2c571d115bbcd 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 295 1.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_05825 f57fe747cae4e001b0a2c571d115bbcd 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 279 1.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_05825 f57fe747cae4e001b0a2c571d115bbcd 318 SMART SM00342 212 295 9.1E-27 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_05825 f57fe747cae4e001b0a2c571d115bbcd 318 Pfam PF12833 Helix-turn-helix domain 218 296 2.8E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_05825 f57fe747cae4e001b0a2c571d115bbcd 318 Pfam PF12852 Cupin 3 179 1.0E-29 T 13-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain P40_05825 f57fe747cae4e001b0a2c571d115bbcd 318 SUPERFAMILY SSF46689 195 245 2.78E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_05825 f57fe747cae4e001b0a2c571d115bbcd 318 SUPERFAMILY SSF51215 43 178 5.23E-5 T 13-10-2018 IPR037923 Transcription regulator HTH-like P40_05825 f57fe747cae4e001b0a2c571d115bbcd 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 249 291 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 P40_05825 f57fe747cae4e001b0a2c571d115bbcd 318 SUPERFAMILY SSF46689 248 297 4.94E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_05825 f57fe747cae4e001b0a2c571d115bbcd 318 Gene3D G3DSA:1.10.10.60 193 299 2.9E-24 T 13-10-2018 P40_04915 cbb9287435771d363458fe8474daa104 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_04915 cbb9287435771d363458fe8474daa104 265 Gene3D G3DSA:3.40.50.720 1 259 5.9E-50 T 13-10-2018 P40_04915 cbb9287435771d363458fe8474daa104 265 Pfam PF00106 short chain dehydrogenase 10 192 4.6E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04915 cbb9287435771d363458fe8474daa104 265 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 230 0.0048 T 13-10-2018 P40_04915 cbb9287435771d363458fe8474daa104 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04915 cbb9287435771d363458fe8474daa104 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.4E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04915 cbb9287435771d363458fe8474daa104 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.4E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04915 cbb9287435771d363458fe8474daa104 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.4E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04915 cbb9287435771d363458fe8474daa104 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.4E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04915 cbb9287435771d363458fe8474daa104 265 SUPERFAMILY SSF51735 1 258 4.12E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_05335 f9e52d86628d13d8b3d546a5be07bcf1 353 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 9 349 9.9E-123 T 13-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition P40_05335 f9e52d86628d13d8b3d546a5be07bcf1 353 SUPERFAMILY SSF55729 152 327 9.53E-37 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_05335 f9e52d86628d13d8b3d546a5be07bcf1 353 Gene3D G3DSA:3.40.630.30 150 304 1.5E-7 T 13-10-2018 P40_04985 9006e3f7e717be5769a089a3d7fdfe4f 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 162 2.0E-11 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_04985 9006e3f7e717be5769a089a3d7fdfe4f 711 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 710 1.5E-89 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 P40_04985 9006e3f7e717be5769a089a3d7fdfe4f 711 Pfam PF00593 TonB dependent receptor 282 709 2.4E-39 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_04985 9006e3f7e717be5769a089a3d7fdfe4f 711 Gene3D G3DSA:2.170.130.10 56 179 2.1E-15 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_04985 9006e3f7e717be5769a089a3d7fdfe4f 711 Gene3D G3DSA:2.40.170.20 184 711 7.8E-74 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_04985 9006e3f7e717be5769a089a3d7fdfe4f 711 SUPERFAMILY SSF56935 25 711 1.37E-97 T 13-10-2018 P40_09540 f568b99d15199bec714dfa4e57fe8ee8 445 Pfam PF02321 Outer membrane efflux protein 42 218 8.1E-22 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_09540 f568b99d15199bec714dfa4e57fe8ee8 445 Pfam PF02321 Outer membrane efflux protein 248 417 5.6E-19 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_09540 f568b99d15199bec714dfa4e57fe8ee8 445 Gene3D G3DSA:1.20.1600.10 38 434 1.4E-56 T 13-10-2018 P40_09540 f568b99d15199bec714dfa4e57fe8ee8 445 SUPERFAMILY SSF56954 36 422 7.19E-59 T 13-10-2018 P40_09540 f568b99d15199bec714dfa4e57fe8ee8 445 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 40 438 4.1E-69 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 P40_18050 04535a99bdb64b695f4f2e7cacb3016f 498 Pfam PF00672 HAMP domain 203 249 4.3E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_18050 04535a99bdb64b695f4f2e7cacb3016f 498 SMART SM00044 251 454 6.9E-24 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 P40_18050 04535a99bdb64b695f4f2e7cacb3016f 498 Gene3D G3DSA:1.20.1480.50 166 260 1.5E-12 T 13-10-2018 P40_18050 04535a99bdb64b695f4f2e7cacb3016f 498 SUPERFAMILY SSF55073 281 469 3.61E-54 T 13-10-2018 IPR029787 Nucleotide cyclase P40_18050 04535a99bdb64b695f4f2e7cacb3016f 498 Gene3D G3DSA:3.30.70.1230 276 482 1.2E-60 T 13-10-2018 IPR029787 Nucleotide cyclase P40_18050 04535a99bdb64b695f4f2e7cacb3016f 498 SMART SM00304 203 255 3.6E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P40_18050 04535a99bdb64b695f4f2e7cacb3016f 498 SUPERFAMILY SSF158472 203 251 3.4E-9 T 13-10-2018 P40_18050 04535a99bdb64b695f4f2e7cacb3016f 498 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 287 465 8.6E-33 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 P40_15950 fc54858c027d42383f7bb3a15ce55fa2 166 Pfam PF01584 CheW-like domain 20 156 1.8E-37 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 P40_15950 fc54858c027d42383f7bb3a15ce55fa2 166 Gene3D G3DSA:2.30.30.40 22 147 1.4E-41 T 13-10-2018 P40_15950 fc54858c027d42383f7bb3a15ce55fa2 166 SMART SM00260 16 153 7.5E-45 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 P40_15950 fc54858c027d42383f7bb3a15ce55fa2 166 Gene3D G3DSA:2.40.50.180 39 148 1.4E-41 T 13-10-2018 P40_15950 fc54858c027d42383f7bb3a15ce55fa2 166 SUPERFAMILY SSF50341 16 157 5.89E-41 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 P40_08920 c6346f5bd04fd2dc7e3745268310f4a7 225 Pfam PF06271 RDD family 22 143 2.2E-17 T 13-10-2018 IPR010432 RDD P40_09400 e04ca1939d9c67baf1cd4f07daff80a5 455 Gene3D G3DSA:1.10.40.30 382 445 2.1E-154 T 13-10-2018 P40_09400 e04ca1939d9c67baf1cd4f07daff80a5 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 13 452 5.2E-130 T 13-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P40_09400 e04ca1939d9c67baf1cd4f07daff80a5 455 Pfam PF00206 Lyase 15 312 8.2E-64 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal P40_09400 e04ca1939d9c67baf1cd4f07daff80a5 455 SUPERFAMILY SSF48557 11 452 2.67E-105 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 P40_09400 e04ca1939d9c67baf1cd4f07daff80a5 455 Gene3D G3DSA:1.20.200.10 119 446 2.1E-154 T 13-10-2018 P40_09400 e04ca1939d9c67baf1cd4f07daff80a5 455 Gene3D G3DSA:1.10.275.10 1 118 8.2E-42 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal P40_09400 e04ca1939d9c67baf1cd4f07daff80a5 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 2.0E-16 T 13-10-2018 IPR000362 Fumarate lyase family P40_09400 e04ca1939d9c67baf1cd4f07daff80a5 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.0E-16 T 13-10-2018 IPR000362 Fumarate lyase family P40_09400 e04ca1939d9c67baf1cd4f07daff80a5 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 2.0E-16 T 13-10-2018 IPR000362 Fumarate lyase family P40_09400 e04ca1939d9c67baf1cd4f07daff80a5 455 PRINTS PR00149 Fumarate lyase superfamily signature 118 136 2.0E-16 T 13-10-2018 IPR000362 Fumarate lyase family P40_09400 e04ca1939d9c67baf1cd4f07daff80a5 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 P40_09400 e04ca1939d9c67baf1cd4f07daff80a5 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.3E-51 T 13-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 P40_19105 6b4aa7a888a3742bba626e7e3b123874 542 SUPERFAMILY SSF89550 53 360 2.16E-13 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 P40_07970 4d52c8dbcf550049124bc50f1524629d 106 PIRSF PIRSF039032 1 106 2.3E-34 T 13-10-2018 IPR009387 Toxin HigB-2 P40_09100 ae561c565951525497e33e7af16f3704 236 Pfam PF04445 Putative SAM-dependent methyltransferase 18 230 3.4E-52 T 13-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 P40_09100 ae561c565951525497e33e7af16f3704 236 Gene3D G3DSA:3.40.50.150 43 236 9.8E-56 T 13-10-2018 P40_09100 ae561c565951525497e33e7af16f3704 236 SUPERFAMILY SSF53335 18 230 6.48E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_09100 ae561c565951525497e33e7af16f3704 236 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 1 232 27.752 T 13-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 P40_00245 a57b1830c6d45303d024021394597768 319 Pfam PF01145 SPFH domain / Band 7 family 24 194 3.6E-33 T 13-10-2018 IPR001107 Band 7 domain P40_00245 a57b1830c6d45303d024021394597768 319 Gene3D G3DSA:3.30.479.30 48 180 1.9E-42 T 13-10-2018 P40_00245 a57b1830c6d45303d024021394597768 319 SMART SM00244 20 178 2.8E-57 T 13-10-2018 IPR001107 Band 7 domain P40_00245 a57b1830c6d45303d024021394597768 319 PRINTS PR00721 Stomatin signature 130 153 5.2E-31 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_00245 a57b1830c6d45303d024021394597768 319 PRINTS PR00721 Stomatin signature 110 127 5.2E-31 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_00245 a57b1830c6d45303d024021394597768 319 PRINTS PR00721 Stomatin signature 154 172 5.2E-31 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_00245 a57b1830c6d45303d024021394597768 319 PRINTS PR00721 Stomatin signature 173 194 5.2E-31 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_00245 a57b1830c6d45303d024021394597768 319 PRINTS PR00721 Stomatin signature 75 96 5.2E-31 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_00245 a57b1830c6d45303d024021394597768 319 SUPERFAMILY SSF117892 51 185 5.1E-42 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily P40_00245 a57b1830c6d45303d024021394597768 319 Pfam PF16200 C-terminal region of band_7 254 315 5.2E-24 T 13-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 P40_19935 34a25dfc9275cd6f4aa12088128365df 187 Gene3D G3DSA:3.40.30.10 1 186 1.5E-63 T 13-10-2018 P40_19935 34a25dfc9275cd6f4aa12088128365df 187 SUPERFAMILY SSF52833 1 186 4.77E-58 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_19935 34a25dfc9275cd6f4aa12088128365df 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 6.4E-106 T 13-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 P40_19935 34a25dfc9275cd6f4aa12088128365df 187 PIRSF PIRSF000239 1 187 2.0E-54 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P40_19935 34a25dfc9275cd6f4aa12088128365df 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 2.7E-6 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P40_19935 34a25dfc9275cd6f4aa12088128365df 187 Pfam PF00578 AhpC/TSA family 6 133 1.6E-35 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P40_19075 3a99055f31d0baf3bf312f549305d6b5 325 Gene3D G3DSA:2.60.120.330 3 325 3.9E-111 T 13-10-2018 IPR027443 Isopenicillin N synthase-like P40_19075 3a99055f31d0baf3bf312f549305d6b5 325 PRINTS PR00682 Isopenicillin N synthase signature 160 176 1.1E-13 T 13-10-2018 P40_19075 3a99055f31d0baf3bf312f549305d6b5 325 PRINTS PR00682 Isopenicillin N synthase signature 38 55 1.1E-13 T 13-10-2018 P40_19075 3a99055f31d0baf3bf312f549305d6b5 325 PRINTS PR00682 Isopenicillin N synthase signature 246 272 1.1E-13 T 13-10-2018 P40_19075 3a99055f31d0baf3bf312f549305d6b5 325 SUPERFAMILY SSF51197 13 324 1.51E-98 T 13-10-2018 P40_19075 3a99055f31d0baf3bf312f549305d6b5 325 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 186 284 1.0E-22 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 P40_19075 3a99055f31d0baf3bf312f549305d6b5 325 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 15 139 2.5E-32 T 13-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain P40_12785 561125c29327547a3a417473ae55b03b 214 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 6 209 1.2E-43 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 P40_12785 561125c29327547a3a417473ae55b03b 214 SUPERFAMILY SSF51366 5 212 5.49E-59 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 P40_12785 561125c29327547a3a417473ae55b03b 214 Gene3D G3DSA:3.20.20.70 4 214 1.9E-64 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_12785 561125c29327547a3a417473ae55b03b 214 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 214 41.419 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 P40_10730 99fb44cdd90aee4ba4958b6ee0341cd1 181 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 39.426 T 13-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 P40_10730 99fb44cdd90aee4ba4958b6ee0341cd1 181 SUPERFAMILY SSF51182 5 178 6.06E-42 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_10730 99fb44cdd90aee4ba4958b6ee0341cd1 181 Pfam PF03079 ARD/ARD' family 22 165 2.9E-36 T 13-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 P40_10730 99fb44cdd90aee4ba4958b6ee0341cd1 181 Gene3D G3DSA:2.60.120.10 2 157 1.0E-54 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_11420 11d50826df0c325bdbc4190f79cf0416 638 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 303 324 - T 13-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 P40_11420 11d50826df0c325bdbc4190f79cf0416 638 Gene3D G3DSA:1.10.4030.30 42 161 7.1E-8 T 13-10-2018 P40_11420 11d50826df0c325bdbc4190f79cf0416 638 Gene3D G3DSA:3.10.50.40 267 365 9.5E-27 T 13-10-2018 P40_11420 11d50826df0c325bdbc4190f79cf0416 638 Pfam PF13616 PPIC-type PPIASE domain 254 363 9.5E-22 T 13-10-2018 P40_11420 11d50826df0c325bdbc4190f79cf0416 638 Pfam PF13624 SurA N-terminal domain 1 161 2.5E-36 T 13-10-2018 P40_11420 11d50826df0c325bdbc4190f79cf0416 638 SUPERFAMILY SSF109998 42 238 9.42E-21 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily P40_11420 11d50826df0c325bdbc4190f79cf0416 638 SUPERFAMILY SSF54534 268 363 6.21E-24 T 13-10-2018 P40_11420 11d50826df0c325bdbc4190f79cf0416 638 Gene3D G3DSA:1.10.4030.30 238 366 9.5E-27 T 13-10-2018 P40_16450 bb14d2c9f112d1df36c45bede5eb262f 384 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 12 382 39.03 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_16450 bb14d2c9f112d1df36c45bede5eb262f 384 Pfam PF01098 Cell cycle protein 18 374 8.2E-98 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_16450 bb14d2c9f112d1df36c45bede5eb262f 384 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 14 372 3.6E-121 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_16450 bb14d2c9f112d1df36c45bede5eb262f 384 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 331 355 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_11125 80409294d599a328289bc1c377252334 287 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 10 183 5.5E-36 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 P40_11125 80409294d599a328289bc1c377252334 287 SUPERFAMILY SSF46785 88 163 4.6E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_11125 80409294d599a328289bc1c377252334 287 SUPERFAMILY SSF46785 4 86 3.47E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_11125 80409294d599a328289bc1c377252334 287 Gene3D G3DSA:1.10.10.10 4 85 9.2E-12 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_11125 80409294d599a328289bc1c377252334 287 Gene3D G3DSA:1.10.10.10 86 184 8.3E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_11125 80409294d599a328289bc1c377252334 287 Pfam PF04079 Segregation and condensation complex subunit ScpB 12 172 3.3E-51 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 P40_11055 6c7d1b410731ab765cc2c0e4deab7621 206 Pfam PF01323 DSBA-like thioredoxin domain 11 195 2.2E-30 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 P40_11055 6c7d1b410731ab765cc2c0e4deab7621 206 Gene3D G3DSA:3.40.30.10 9 203 1.3E-54 T 13-10-2018 P40_11055 6c7d1b410731ab765cc2c0e4deab7621 206 PIRSF PIRSF006386 4 203 5.3E-53 T 13-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 P40_11055 6c7d1b410731ab765cc2c0e4deab7621 206 SUPERFAMILY SSF52833 10 195 2.8E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_00010 6bff73f56016400ae5b565e133e31207 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 365 6.6E-40 T 13-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 P40_00010 6bff73f56016400ae5b565e133e31207 366 SMART SM00480 17 362 8.8E-141 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 P40_00010 6bff73f56016400ae5b565e133e31207 366 PIRSF PIRSF000804 1 366 2.5E-119 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 P40_00010 6bff73f56016400ae5b565e133e31207 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 132 243 3.3E-34 T 13-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 P40_00010 6bff73f56016400ae5b565e133e31207 366 SUPERFAMILY SSF55979 128 244 1.57E-27 T 13-10-2018 P40_00010 6bff73f56016400ae5b565e133e31207 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.4E-109 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 P40_00010 6bff73f56016400ae5b565e133e31207 366 SUPERFAMILY SSF55979 245 366 2.17E-37 T 13-10-2018 P40_00010 6bff73f56016400ae5b565e133e31207 366 Gene3D G3DSA:3.10.150.10 1 122 3.3E-43 T 13-10-2018 P40_00010 6bff73f56016400ae5b565e133e31207 366 Gene3D G3DSA:3.10.150.10 123 248 5.7E-36 T 13-10-2018 P40_00010 6bff73f56016400ae5b565e133e31207 366 Gene3D G3DSA:3.10.150.10 249 366 2.9E-39 T 13-10-2018 P40_00010 6bff73f56016400ae5b565e133e31207 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 1.6E-37 T 13-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 P40_00010 6bff73f56016400ae5b565e133e31207 366 SUPERFAMILY SSF55979 1 117 2.66E-28 T 13-10-2018 P40_20780 b13f5a2dedae85f6ba730c0732069711 410 Gene3D G3DSA:2.40.30.170 65 310 7.5E-94 T 13-10-2018 P40_20780 b13f5a2dedae85f6ba730c0732069711 410 Gene3D G3DSA:1.10.287.470 112 185 7.5E-94 T 13-10-2018 P40_20780 b13f5a2dedae85f6ba730c0732069711 410 SUPERFAMILY SSF111369 67 305 2.88E-57 T 13-10-2018 P40_20780 b13f5a2dedae85f6ba730c0732069711 410 Gene3D G3DSA:2.40.50.100 77 221 7.5E-94 T 13-10-2018 P40_20780 b13f5a2dedae85f6ba730c0732069711 410 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 300 6.4E-19 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain P40_20780 b13f5a2dedae85f6ba730c0732069711 410 Gene3D G3DSA:2.40.420.20 311 378 7.5E-94 T 13-10-2018 P40_20780 b13f5a2dedae85f6ba730c0732069711 410 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 53 378 1.6E-77 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 P40_10965 4d57e3489352c828d791dcb6409139d6 279 Pfam PF00753 Metallo-beta-lactamase superfamily 31 196 6.6E-23 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_10965 4d57e3489352c828d791dcb6409139d6 279 Gene3D G3DSA:3.60.15.10 7 201 2.2E-50 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_10965 4d57e3489352c828d791dcb6409139d6 279 Gene3D G3DSA:1.10.10.10 204 278 3.9E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_10965 4d57e3489352c828d791dcb6409139d6 279 SMART SM00849 31 196 4.6E-29 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_10965 4d57e3489352c828d791dcb6409139d6 279 SUPERFAMILY SSF56281 9 269 3.08E-54 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_07540 8f3b89a473bb71a02c17a0191598ba42 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 4.7E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_07540 8f3b89a473bb71a02c17a0191598ba42 290 SUPERFAMILY SSF46785 3 112 1.06E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_07540 8f3b89a473bb71a02c17a0191598ba42 290 Gene3D G3DSA:1.10.10.10 1 86 7.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_07540 8f3b89a473bb71a02c17a0191598ba42 290 Gene3D G3DSA:3.40.190.10 170 263 2.5E-36 T 13-10-2018 P40_07540 8f3b89a473bb71a02c17a0191598ba42 290 Pfam PF03466 LysR substrate binding domain 90 285 1.2E-22 T 13-10-2018 IPR005119 LysR, substrate-binding P40_07540 8f3b89a473bb71a02c17a0191598ba42 290 Gene3D G3DSA:3.40.190.10 97 267 2.5E-36 T 13-10-2018 P40_07540 8f3b89a473bb71a02c17a0191598ba42 290 SUPERFAMILY SSF53850 90 287 2.35E-23 T 13-10-2018 P40_11185 c773bfad4a58b7c0ece4dff25a052838 204 Gene3D G3DSA:1.25.40.10 93 203 4.1E-32 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_11185 c773bfad4a58b7c0ece4dff25a052838 204 SUPERFAMILY SSF48452 4 198 3.34E-60 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_11185 c773bfad4a58b7c0ece4dff25a052838 204 Pfam PF06041 Bacterial protein of unknown function (DUF924) 11 198 2.6E-62 T 13-10-2018 IPR010323 Protein of unknown function DUF924 P40_11185 c773bfad4a58b7c0ece4dff25a052838 204 Gene3D G3DSA:1.20.58.320 3 92 2.1E-23 T 13-10-2018 P40_06475 68f319909ca5815bf0608c22eb1089d3 202 Gene3D G3DSA:1.10.10.60 5 51 4.8E-20 T 13-10-2018 P40_06475 68f319909ca5815bf0608c22eb1089d3 202 SUPERFAMILY SSF46689 2 64 6.16E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06475 68f319909ca5815bf0608c22eb1089d3 202 SUPERFAMILY SSF48498 87 184 1.93E-26 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_06475 68f319909ca5815bf0608c22eb1089d3 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 9.3E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_06475 68f319909ca5815bf0608c22eb1089d3 202 Gene3D G3DSA:1.10.357.10 52 184 1.6E-38 T 13-10-2018 P40_06475 68f319909ca5815bf0608c22eb1089d3 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.7E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_06475 68f319909ca5815bf0608c22eb1089d3 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.7E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_09555 fce4ab64c5a9dce75483c7cc6f12ce6a 261 Pfam PF00561 alpha/beta hydrolase fold 97 149 1.1E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_09555 fce4ab64c5a9dce75483c7cc6f12ce6a 261 Gene3D G3DSA:3.40.50.1820 27 255 4.7E-32 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_09555 fce4ab64c5a9dce75483c7cc6f12ce6a 261 SUPERFAMILY SSF53474 41 223 7.83E-25 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_10525 d3276e19c9f19c967f81c7cd035a5ae0 263 Gene3D G3DSA:1.25.40.590 32 194 7.9E-42 T 13-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily P40_10525 d3276e19c9f19c967f81c7cd035a5ae0 263 Pfam PF09850 Type VI secretion system protein DotU 34 232 4.1E-56 T 13-10-2018 IPR017732 Type IV / VI secretion system, DotU P40_10525 d3276e19c9f19c967f81c7cd035a5ae0 263 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 34 239 7.7E-62 T 13-10-2018 IPR017732 Type IV / VI secretion system, DotU P40_04900 15959c8fece5286cdd43164bfbc56a43 225 Gene3D G3DSA:3.40.50.2300 1 121 2.0E-36 T 13-10-2018 P40_04900 15959c8fece5286cdd43164bfbc56a43 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 9.1E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_04900 15959c8fece5286cdd43164bfbc56a43 225 SMART SM00448 1 112 2.0E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04900 15959c8fece5286cdd43164bfbc56a43 225 SMART SM00862 145 216 1.4E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_04900 15959c8fece5286cdd43164bfbc56a43 225 Pfam PF00072 Response regulator receiver domain 3 112 6.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04900 15959c8fece5286cdd43164bfbc56a43 225 SUPERFAMILY SSF52172 1 177 8.79E-37 T 13-10-2018 IPR011006 CheY-like superfamily P40_04900 15959c8fece5286cdd43164bfbc56a43 225 Gene3D G3DSA:1.10.10.10 122 223 1.1E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_17425 b61d4bdd48ce3c2deaeec6fe5c98fafa 179 Pfam PF11072 Protein of unknown function (DUF2859) 30 176 4.6E-51 T 13-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 P40_17425 b61d4bdd48ce3c2deaeec6fe5c98fafa 179 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 74 179 8.4E-38 T 13-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 142 4.2E-51 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 149 296 1.9E-51 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 2 299 80.155 T 13-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 215 225 2.0E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 277 288 2.0E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 46 60 2.0E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 79 92 2.0E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 119 133 2.0E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 Gene3D G3DSA:3.40.50.1370 3 132 4.6E-117 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 Gene3D G3DSA:3.40.50.1370 133 294 4.6E-117 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 130 141 5.4E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 5.4E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 251 260 5.4E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 263 286 5.4E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 SUPERFAMILY SSF53671 2 300 2.75E-107 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 P40_15305 e427a22f3f88b66da0f0dd5083490540 302 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 3 298 1.3E-121 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 P40_09245 fe6f462015cd3f75fa53907ff624f7e1 541 Gene3D G3DSA:3.40.50.300 1 284 1.3E-129 T 13-10-2018 P40_09245 fe6f462015cd3f75fa53907ff624f7e1 541 SUPERFAMILY SSF52540 1 269 1.68E-120 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_09245 fe6f462015cd3f75fa53907ff624f7e1 541 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 3.0E-247 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 P40_09245 fe6f462015cd3f75fa53907ff624f7e1 541 Gene3D G3DSA:3.40.50.880 285 541 3.9E-105 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_09245 fe6f462015cd3f75fa53907ff624f7e1 541 Pfam PF06418 CTP synthase N-terminus 3 265 4.7E-124 T 13-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 P40_09245 fe6f462015cd3f75fa53907ff624f7e1 541 SUPERFAMILY SSF52317 287 540 9.62E-89 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_09245 fe6f462015cd3f75fa53907ff624f7e1 541 Hamap MF_01227 CTP synthase [pyrG]. 2 539 51.444 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 P40_09245 fe6f462015cd3f75fa53907ff624f7e1 541 Pfam PF00117 Glutamine amidotransferase class-I 300 533 1.5E-57 T 13-10-2018 IPR017926 Glutamine amidotransferase P40_05485 7a43a6bf67c9d23a04f39477b00f5968 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 279 2.7E-30 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_00395 2b4940f5268cbbb91496d8840f1bd9ab 185 Gene3D G3DSA:3.40.30.10 32 179 1.1E-31 T 13-10-2018 P40_00395 2b4940f5268cbbb91496d8840f1bd9ab 185 Pfam PF13098 Thioredoxin-like domain 43 173 1.5E-14 T 13-10-2018 IPR012336 Thioredoxin-like fold P40_00395 2b4940f5268cbbb91496d8840f1bd9ab 185 SUPERFAMILY SSF52833 20 175 2.36E-26 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_17920 3a6ae10150e952596caf25f4396e9491 310 Gene3D G3DSA:2.40.30.30 188 309 1.4E-38 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 P40_17920 3a6ae10150e952596caf25f4396e9491 310 Pfam PF06574 FAD synthetase 13 167 5.6E-54 T 13-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 P40_17920 3a6ae10150e952596caf25f4396e9491 310 Pfam PF01687 Riboflavin kinase 184 305 3.2E-37 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 P40_17920 3a6ae10150e952596caf25f4396e9491 310 SMART SM00904 183 307 3.7E-57 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 P40_17920 3a6ae10150e952596caf25f4396e9491 310 SUPERFAMILY SSF52374 16 175 1.46E-33 T 13-10-2018 P40_17920 3a6ae10150e952596caf25f4396e9491 310 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 307 5.2E-92 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 P40_17920 3a6ae10150e952596caf25f4396e9491 310 PIRSF PIRSF004491 1 310 9.5E-102 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 P40_17920 3a6ae10150e952596caf25f4396e9491 310 Gene3D G3DSA:3.40.50.620 1 186 4.9E-61 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_17920 3a6ae10150e952596caf25f4396e9491 310 SUPERFAMILY SSF82114 174 307 6.1E-40 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 P40_02315 9086eb7b171b72b97b2754af7ddff121 167 Gene3D G3DSA:1.20.1550.10 2 166 2.6E-53 T 13-10-2018 IPR023380 DsbB-like superfamily P40_02315 9086eb7b171b72b97b2754af7ddff121 167 Pfam PF02600 Disulfide bond formation protein DsbB 9 159 2.1E-43 T 13-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 P40_02315 9086eb7b171b72b97b2754af7ddff121 167 SUPERFAMILY SSF158442 13 161 4.45E-45 T 13-10-2018 IPR023380 DsbB-like superfamily P40_02315 9086eb7b171b72b97b2754af7ddff121 167 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 4 167 24.171 T 13-10-2018 IPR022920 Disulphide bond formation protein DsbB P40_19465 2468b97daba17cbef2e9e6a71dca142b 361 Pfam PF06580 Histidine kinase 155 233 4.7E-24 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 P40_19465 2468b97daba17cbef2e9e6a71dca142b 361 SUPERFAMILY SSF55874 208 314 1.46E-8 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_19465 2468b97daba17cbef2e9e6a71dca142b 361 Gene3D G3DSA:3.30.565.10 210 342 4.1E-12 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_03230 ed9c9f7e17c5bcca01eab57180e85717 320 Gene3D G3DSA:3.40.50.1820 3 296 4.8E-60 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_03230 ed9c9f7e17c5bcca01eab57180e85717 320 SUPERFAMILY SSF53474 4 289 1.17E-55 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_03230 ed9c9f7e17c5bcca01eab57180e85717 320 Pfam PF00561 alpha/beta hydrolase fold 25 276 4.7E-22 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_21055 fa79350465b283ca57a61973ffd20726 688 Pfam PF13768 von Willebrand factor type A domain 314 462 2.0E-19 T 13-10-2018 IPR002035 von Willebrand factor, type A P40_21055 fa79350465b283ca57a61973ffd20726 688 SMART SM00327 310 476 2.2E-16 T 13-10-2018 IPR002035 von Willebrand factor, type A P40_21055 fa79350465b283ca57a61973ffd20726 688 Pfam PF08487 Vault protein inter-alpha-trypsin domain 43 152 2.6E-30 T 13-10-2018 IPR013694 VIT domain P40_21055 fa79350465b283ca57a61973ffd20726 688 Gene3D G3DSA:3.40.50.410 311 479 6.5E-31 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily P40_21055 fa79350465b283ca57a61973ffd20726 688 SMART SM00609 26 154 5.1E-8 T 13-10-2018 IPR013694 VIT domain P40_21055 fa79350465b283ca57a61973ffd20726 688 SUPERFAMILY SSF53300 310 473 2.64E-29 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily P40_07935 52aebbef73de76d6ff709305c4e5ed91 254 Gene3D G3DSA:1.10.12.10 202 254 7.8E-13 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_07935 52aebbef73de76d6ff709305c4e5ed91 254 Gene3D G3DSA:3.90.226.10 4 198 9.9E-58 T 13-10-2018 P40_07935 52aebbef73de76d6ff709305c4e5ed91 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 253 3.1E-57 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_07935 52aebbef73de76d6ff709305c4e5ed91 254 SUPERFAMILY SSF52096 4 253 1.46E-72 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_00935 9651f53179609584ce0997b895cb49f9 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.6E-26 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_00935 9651f53179609584ce0997b895cb49f9 78 SUPERFAMILY SSF143800 2 76 2.16E-30 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_00935 9651f53179609584ce0997b895cb49f9 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 20.623 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_00935 9651f53179609584ce0997b895cb49f9 78 Pfam PF00830 Ribosomal L28 family 3 62 3.3E-26 T 13-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_00935 9651f53179609584ce0997b895cb49f9 78 Gene3D G3DSA:2.30.170.40 2 78 3.2E-32 T 13-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_11330 85be6876f70662d3aa7e26ea01f2dffe 389 SUPERFAMILY SSF54506 2 182 2.04E-70 T 13-10-2018 P40_11330 85be6876f70662d3aa7e26ea01f2dffe 389 SUPERFAMILY SSF54506 186 388 1.88E-77 T 13-10-2018 P40_11330 85be6876f70662d3aa7e26ea01f2dffe 389 Gene3D G3DSA:3.10.310.10 11 385 5.0E-151 T 13-10-2018 P40_11330 85be6876f70662d3aa7e26ea01f2dffe 389 Pfam PF04303 PrpF protein 6 388 7.6E-175 T 13-10-2018 IPR007400 PrpF protein P40_11330 85be6876f70662d3aa7e26ea01f2dffe 389 Gene3D G3DSA:3.10.310.10 181 371 5.0E-151 T 13-10-2018 P40_11330 85be6876f70662d3aa7e26ea01f2dffe 389 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 5 388 8.5E-229 T 13-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 P40_00595 076883d5b11ae6675f3bc15eeff10b3b 424 Pfam PF05977 Transmembrane secretion effector 18 402 6.2E-30 T 13-10-2018 IPR010290 Transmembrane secretion effector P40_00595 076883d5b11ae6675f3bc15eeff10b3b 424 SUPERFAMILY SSF103473 18 411 2.49E-41 T 13-10-2018 IPR036259 MFS transporter superfamily P40_00595 076883d5b11ae6675f3bc15eeff10b3b 424 Gene3D G3DSA:1.20.1250.20 19 398 5.4E-31 T 13-10-2018 P40_05420 e8841aabb9dc013be932b51454cc6024 242 Pfam PF01738 Dienelactone hydrolase family 18 239 2.4E-31 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 P40_05420 e8841aabb9dc013be932b51454cc6024 242 Gene3D G3DSA:3.40.50.1820 1 241 5.2E-46 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_05420 e8841aabb9dc013be932b51454cc6024 242 SUPERFAMILY SSF53474 4 240 5.26E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_15435 8abcddb08f5d7f16323e703a4b74a17f 129 SUPERFAMILY SSF55331 2 126 1.92E-44 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily P40_15435 8abcddb08f5d7f16323e703a4b74a17f 129 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 123 2.7E-18 T 13-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 P40_15435 8abcddb08f5d7f16323e703a4b74a17f 129 Gene3D G3DSA:3.30.429.10 2 126 4.2E-49 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily P40_11545 9b6e81f9c4a1238c9f69974d0c94a409 443 PRINTS PR01036 Tetracycline resistance protein TetB signature 101 121 7.3E-9 T 13-10-2018 P40_11545 9b6e81f9c4a1238c9f69974d0c94a409 443 PRINTS PR01036 Tetracycline resistance protein TetB signature 10 34 7.3E-9 T 13-10-2018 P40_11545 9b6e81f9c4a1238c9f69974d0c94a409 443 PRINTS PR01036 Tetracycline resistance protein TetB signature 131 155 7.3E-9 T 13-10-2018 P40_11545 9b6e81f9c4a1238c9f69974d0c94a409 443 PRINTS PR01036 Tetracycline resistance protein TetB signature 293 317 7.3E-9 T 13-10-2018 P40_11545 9b6e81f9c4a1238c9f69974d0c94a409 443 SUPERFAMILY SSF103473 4 441 8.76E-67 T 13-10-2018 IPR036259 MFS transporter superfamily P40_11545 9b6e81f9c4a1238c9f69974d0c94a409 443 Pfam PF07690 Major Facilitator Superfamily 13 401 2.2E-50 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_11545 9b6e81f9c4a1238c9f69974d0c94a409 443 Gene3D G3DSA:1.20.1250.20 250 442 6.1E-25 T 13-10-2018 P40_11545 9b6e81f9c4a1238c9f69974d0c94a409 443 Gene3D G3DSA:1.20.1720.10 8 244 4.2E-45 T 13-10-2018 P40_08435 f592bbee499c9714d7d642f3fded5b8a 805 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 2 789 1.3E-238 T 13-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family P40_08435 f592bbee499c9714d7d642f3fded5b8a 805 SUPERFAMILY SSF53474 321 706 3.74E-16 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_08435 f592bbee499c9714d7d642f3fded5b8a 805 Pfam PF12262 Bacterial virulence factor lipase N-terminal 37 275 4.8E-25 T 13-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain P40_08435 f592bbee499c9714d7d642f3fded5b8a 805 Gene3D G3DSA:3.40.50.1820 407 599 1.4E-23 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_08045 e77a30d0242ae4257cb570c2ea561572 142 SUPERFAMILY SSF52788 2 142 3.66E-35 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily P40_08045 e77a30d0242ae4257cb570c2ea561572 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 1.6E-15 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 P40_08045 e77a30d0242ae4257cb570c2ea561572 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 1.6E-15 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 P40_08045 e77a30d0242ae4257cb570c2ea561572 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 1.6E-15 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 P40_08045 e77a30d0242ae4257cb570c2ea561572 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 1.6E-15 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 P40_08045 e77a30d0242ae4257cb570c2ea561572 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 1.6E-15 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 P40_08045 e77a30d0242ae4257cb570c2ea561572 142 SMART SM00226 3 141 3.3E-31 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I P40_08045 e77a30d0242ae4257cb570c2ea561572 142 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 139 4.0E-28 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I P40_08045 e77a30d0242ae4257cb570c2ea561572 142 Gene3D G3DSA:3.40.50.2300 1 142 3.1E-43 T 13-10-2018 P40_03920 a864e6d16f5a4e8e2ec7501b41b9e5af 569 Gene3D G3DSA:3.40.50.1820 92 305 1.0E-5 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_03920 a864e6d16f5a4e8e2ec7501b41b9e5af 569 SUPERFAMILY SSF53474 98 522 2.54E-13 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_03920 a864e6d16f5a4e8e2ec7501b41b9e5af 569 Pfam PF07519 Tannase and feruloyl esterase 82 568 1.2E-113 T 13-10-2018 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 P40_03870 7b35c6776411c85384955cebc305c5d3 331 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 26 315 1.2E-160 T 13-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 P40_03870 7b35c6776411c85384955cebc305c5d3 331 Gene3D G3DSA:1.20.1260.10 19 329 4.4E-127 T 13-10-2018 IPR012347 Ferritin-like P40_03870 7b35c6776411c85384955cebc305c5d3 331 SUPERFAMILY SSF47240 46 289 4.06E-82 T 13-10-2018 IPR009078 Ferritin-like superfamily P40_03870 7b35c6776411c85384955cebc305c5d3 331 Pfam PF05138 Phenylacetic acid catabolic protein 36 311 1.4E-99 T 13-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 P40_06165 60014442e9731e0b28d0481f2c796dae 189 SUPERFAMILY SSF52317 4 187 1.2E-52 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_06165 60014442e9731e0b28d0481f2c796dae 189 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 6 187 1.3E-60 T 13-10-2018 IPR006286 Deglycase PfpI P40_06165 60014442e9731e0b28d0481f2c796dae 189 Gene3D G3DSA:3.40.50.880 2 189 3.3E-55 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_06165 60014442e9731e0b28d0481f2c796dae 189 Pfam PF01965 DJ-1/PfpI family 4 184 3.5E-52 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 P40_15290 0aac701c85ba6d8875773f1fe5d33e78 726 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 148 1.5E-15 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_15290 0aac701c85ba6d8875773f1fe5d33e78 726 Gene3D G3DSA:2.170.130.10 38 155 7.2E-16 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_15290 0aac701c85ba6d8875773f1fe5d33e78 726 SUPERFAMILY SSF56935 23 726 3.36E-97 T 13-10-2018 P40_15290 0aac701c85ba6d8875773f1fe5d33e78 726 Pfam PF00593 TonB dependent receptor 273 723 5.8E-39 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_15290 0aac701c85ba6d8875773f1fe5d33e78 726 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 709 726 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site P40_06065 08a0271e73bd4d4cf43307d1c2f2ac0f 289 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 80 - T 13-10-2018 IPR010916 TonB box, conserved site P40_06065 08a0271e73bd4d4cf43307d1c2f2ac0f 289 SUPERFAMILY SSF46689 237 286 1.86E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06065 08a0271e73bd4d4cf43307d1c2f2ac0f 289 SUPERFAMILY SSF46689 184 235 4.38E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06065 08a0271e73bd4d4cf43307d1c2f2ac0f 289 Pfam PF06719 AraC-type transcriptional regulator N-terminus 26 172 7.3E-37 T 13-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal P40_06065 08a0271e73bd4d4cf43307d1c2f2ac0f 289 Pfam PF12833 Helix-turn-helix domain 207 282 1.1E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_06065 08a0271e73bd4d4cf43307d1c2f2ac0f 289 SUPERFAMILY SSF51182 36 87 4.09E-5 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_06065 08a0271e73bd4d4cf43307d1c2f2ac0f 289 Gene3D G3DSA:1.10.10.60 181 288 4.5E-25 T 13-10-2018 P40_06065 08a0271e73bd4d4cf43307d1c2f2ac0f 289 SMART SM00342 201 284 6.1E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_10015 82448df70d07ab5728ec3e3ed9929e93 369 SUPERFAMILY SSF53335 18 178 6.12E-23 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_10015 82448df70d07ab5728ec3e3ed9929e93 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 154 3.5E-8 T 13-10-2018 P40_10015 82448df70d07ab5728ec3e3ed9929e93 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 55 3.5E-8 T 13-10-2018 P40_10015 82448df70d07ab5728ec3e3ed9929e93 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 101 113 3.5E-8 T 13-10-2018 P40_10015 82448df70d07ab5728ec3e3ed9929e93 369 Gene3D G3DSA:3.40.50.150 20 204 4.6E-18 T 13-10-2018 P40_14315 1120614ee8982ce4f9cd7c84003e9efa 351 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 19 349 8.8E-134 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 P40_14315 1120614ee8982ce4f9cd7c84003e9efa 351 Gene3D G3DSA:3.20.20.70 13 351 1.0E-142 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_14315 1120614ee8982ce4f9cd7c84003e9efa 351 Pfam PF00793 DAHP synthetase I family 52 343 1.7E-82 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 P40_14315 1120614ee8982ce4f9cd7c84003e9efa 351 PIRSF PIRSF001361 3 351 5.4E-142 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 P40_14315 1120614ee8982ce4f9cd7c84003e9efa 351 SUPERFAMILY SSF51569 20 350 1.36E-120 T 13-10-2018 P40_18435 ca5a4648e0020eadf4e7d2aa60aa8a27 449 Gene3D G3DSA:1.10.3080.10 23 433 1.9E-86 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 P40_18435 ca5a4648e0020eadf4e7d2aa60aa8a27 449 PRINTS PR00762 Chloride channel signature 364 380 9.0E-31 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 P40_18435 ca5a4648e0020eadf4e7d2aa60aa8a27 449 PRINTS PR00762 Chloride channel signature 85 102 9.0E-31 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 P40_18435 ca5a4648e0020eadf4e7d2aa60aa8a27 449 PRINTS PR00762 Chloride channel signature 119 138 9.0E-31 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 P40_18435 ca5a4648e0020eadf4e7d2aa60aa8a27 449 PRINTS PR00762 Chloride channel signature 381 400 9.0E-31 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 P40_18435 ca5a4648e0020eadf4e7d2aa60aa8a27 449 PRINTS PR00762 Chloride channel signature 334 354 9.0E-31 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 P40_18435 ca5a4648e0020eadf4e7d2aa60aa8a27 449 PRINTS PR00762 Chloride channel signature 171 190 9.0E-31 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 P40_18435 ca5a4648e0020eadf4e7d2aa60aa8a27 449 Pfam PF00654 Voltage gated chloride channel 72 414 3.8E-78 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 P40_18435 ca5a4648e0020eadf4e7d2aa60aa8a27 449 SUPERFAMILY SSF81340 4 429 6.54E-89 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 P40_00085 8dd7a5655df14873e672445461ce9236 241 SUPERFAMILY SSF52317 37 207 2.2E-34 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_00085 8dd7a5655df14873e672445461ce9236 241 Gene3D G3DSA:3.40.50.880 1 239 1.2E-49 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_00085 8dd7a5655df14873e672445461ce9236 241 Pfam PF00117 Glutamine amidotransferase class-I 55 191 5.9E-15 T 13-10-2018 IPR017926 Glutamine amidotransferase P40_03780 d91a008c99c4affa01bded86950f11b5 718 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 239 261 3.1E-60 T 13-10-2018 P40_03780 d91a008c99c4affa01bded86950f11b5 718 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 376 385 3.1E-60 T 13-10-2018 P40_03780 d91a008c99c4affa01bded86950f11b5 718 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 668 688 3.1E-60 T 13-10-2018 P40_03780 d91a008c99c4affa01bded86950f11b5 718 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 500 514 3.1E-60 T 13-10-2018 P40_03780 d91a008c99c4affa01bded86950f11b5 718 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 286 3.1E-60 T 13-10-2018 P40_03780 d91a008c99c4affa01bded86950f11b5 718 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 543 550 3.1E-60 T 13-10-2018 P40_03780 d91a008c99c4affa01bded86950f11b5 718 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 581 602 3.1E-60 T 13-10-2018 P40_03780 d91a008c99c4affa01bded86950f11b5 718 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 437 3.1E-60 T 13-10-2018 P40_03780 d91a008c99c4affa01bded86950f11b5 718 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 646 661 3.1E-60 T 13-10-2018 P40_03780 d91a008c99c4affa01bded86950f11b5 718 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 373 391 6.0E-32 T 13-10-2018 P40_03780 d91a008c99c4affa01bded86950f11b5 718 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 412 430 6.0E-32 T 13-10-2018 P40_03780 d91a008c99c4affa01bded86950f11b5 718 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 259 6.0E-32 T 13-10-2018 P40_03780 d91a008c99c4affa01bded86950f11b5 718 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 499 515 6.0E-32 T 13-10-2018 P40_03780 d91a008c99c4affa01bded86950f11b5 718 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 528 550 6.0E-32 T 13-10-2018 P40_03780 d91a008c99c4affa01bded86950f11b5 718 Gene3D G3DSA:3.50.50.60 392 513 2.0E-104 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_03780 d91a008c99c4affa01bded86950f11b5 718 SUPERFAMILY SSF55424 581 696 3.26E-37 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P40_03780 d91a008c99c4affa01bded86950f11b5 718 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 585 693 1.3E-29 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 P40_03780 d91a008c99c4affa01bded86950f11b5 718 Pfam PF09335 SNARE associated Golgi protein 68 184 8.6E-23 T 13-10-2018 IPR032816 SNARE associated Golgi protein P40_03780 d91a008c99c4affa01bded86950f11b5 718 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 272 282 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 P40_03780 d91a008c99c4affa01bded86950f11b5 718 SUPERFAMILY SSF51905 240 616 2.59E-58 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_03780 d91a008c99c4affa01bded86950f11b5 718 Gene3D G3DSA:3.50.50.60 240 568 2.0E-104 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_03780 d91a008c99c4affa01bded86950f11b5 718 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 239 563 6.1E-64 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_03780 d91a008c99c4affa01bded86950f11b5 718 Gene3D G3DSA:3.30.390.30 584 705 1.2E-39 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P40_14175 3894aebeb2cb779f06d2d22641f88f7d 239 SUPERFAMILY SSF88946 14 109 1.49E-23 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P40_14175 3894aebeb2cb779f06d2d22641f88f7d 239 SUPERFAMILY SSF88659 132 200 3.36E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P40_14175 3894aebeb2cb779f06d2d22641f88f7d 239 Pfam PF08281 Sigma-70, region 4 143 196 7.2E-14 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P40_14175 3894aebeb2cb779f06d2d22641f88f7d 239 Pfam PF04542 Sigma-70 region 2 36 101 2.5E-12 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P40_14175 3894aebeb2cb779f06d2d22641f88f7d 239 Gene3D G3DSA:1.10.10.10 137 203 1.0E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14175 3894aebeb2cb779f06d2d22641f88f7d 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 200 7.7E-23 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P40_14175 3894aebeb2cb779f06d2d22641f88f7d 239 Gene3D G3DSA:1.10.1740.10 12 134 2.8E-28 T 13-10-2018 P40_12705 098763e7910f2243cdc5fe9f2d147196 300 Gene3D G3DSA:3.40.50.150 72 272 9.8E-46 T 13-10-2018 P40_12705 098763e7910f2243cdc5fe9f2d147196 300 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 17 295 1.3E-74 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 P40_12705 098763e7910f2243cdc5fe9f2d147196 300 SUPERFAMILY SSF53335 13 269 1.59E-48 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_16135 56563619872d3a0212ef496d49d4734b 227 Pfam PF13861 FlgD Tudor-like domain 89 224 3.8E-13 T 13-10-2018 IPR025963 FlgD Tudor-like domain P40_16135 56563619872d3a0212ef496d49d4734b 227 Pfam PF03963 Flagellar hook capping protein - N-terminal region 11 78 6.0E-22 T 13-10-2018 IPR005648 Flagellar hook capping protein P40_16135 56563619872d3a0212ef496d49d4734b 227 Gene3D G3DSA:2.30.30.910 89 215 3.3E-32 T 13-10-2018 P40_16135 56563619872d3a0212ef496d49d4734b 227 Pfam PF13860 FlgD Ig-like domain 112 182 1.3E-23 T 13-10-2018 IPR025965 FlgD Ig-like domain P40_16135 56563619872d3a0212ef496d49d4734b 227 Gene3D G3DSA:2.60.40.4070 104 191 3.3E-32 T 13-10-2018 P40_20560 13e604f3798e325decd36f24300e369b 228 SUPERFAMILY SSF55469 8 225 4.71E-46 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 P40_20560 13e604f3798e325decd36f24300e369b 228 Pfam PF00881 Nitroreductase family 13 202 3.1E-31 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 P40_20560 13e604f3798e325decd36f24300e369b 228 Gene3D G3DSA:3.40.109.10 1 223 6.2E-66 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 P40_16295 994bac0aff5f0178ced8a8d618968745 115 Gene3D G3DSA:1.20.120.1490 31 114 9.8E-10 T 13-10-2018 P40_16295 994bac0aff5f0178ced8a8d618968745 115 Pfam PF07813 LTXXQ motif family protein 33 110 1.4E-5 T 13-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 P40_14530 8fbac61fa31e8b913cfef96cab315381 168 Pfam PF11158 Protein of unknown function (DUF2938) 12 160 1.4E-58 T 13-10-2018 IPR021329 Protein of unknown function DUF2938 P40_03805 0fa30729f55ef43c4b4300110601e31c 78 Gene3D G3DSA:1.10.10.1320 9 78 3.5E-11 T 13-10-2018 P40_03805 0fa30729f55ef43c4b4300110601e31c 78 Pfam PF13490 Putative zinc-finger 4 39 5.7E-9 T 13-10-2018 IPR027383 Putative zinc-finger P40_08600 335fdab344a9856d52668b63ad41cd90 295 Gene3D G3DSA:3.40.50.10330 24 288 9.0E-95 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 P40_08600 335fdab344a9856d52668b63ad41cd90 295 Gene3D G3DSA:2.60.200.30 129 265 9.0E-95 T 13-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 P40_08600 335fdab344a9856d52668b63ad41cd90 295 Hamap MF_00361 NAD kinase [nadK]. 7 288 33.415 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 P40_08600 335fdab344a9856d52668b63ad41cd90 295 SUPERFAMILY SSF111331 8 291 4.58E-88 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily P40_08600 335fdab344a9856d52668b63ad41cd90 295 Pfam PF01513 ATP-NAD kinase 9 272 1.8E-64 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 P40_13755 999a2ac34686620300ecedabedf09718 215 PIRSF PIRSF006091 1 206 3.0E-72 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 P40_13755 999a2ac34686620300ecedabedf09718 215 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 3 195 25.783 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 P40_13755 999a2ac34686620300ecedabedf09718 215 SMART SM00900 100 193 6.8E-33 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 P40_13755 999a2ac34686620300ecedabedf09718 215 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 11 194 5.0E-59 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 P40_13755 999a2ac34686620300ecedabedf09718 215 Pfam PF04205 FMN-binding domain 100 190 4.6E-18 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 P40_14020 fb823ab35db47d99f7843984fae9f6f2 721 Gene3D G3DSA:3.40.1080.20 471 616 1.4E-31 T 13-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily P40_14020 fb823ab35db47d99f7843984fae9f6f2 721 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 439 602 1.6E-43 T 13-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain P40_14020 fb823ab35db47d99f7843984fae9f6f2 721 SUPERFAMILY SSF100950 229 628 1.88E-43 T 13-10-2018 IPR037171 NagB/RpiA transferase-like P40_02590 3e47d9f1f8db13046d34cdcd2b967fee 546 SUPERFAMILY SSF56801 20 546 1.57E-144 T 13-10-2018 P40_02590 3e47d9f1f8db13046d34cdcd2b967fee 546 Gene3D G3DSA:3.40.50.12780 16 445 2.2E-110 T 13-10-2018 P40_02590 3e47d9f1f8db13046d34cdcd2b967fee 546 Gene3D G3DSA:3.30.300.30 446 546 3.9E-27 T 13-10-2018 P40_02590 3e47d9f1f8db13046d34cdcd2b967fee 546 ProSitePatterns PS00455 Putative AMP-binding domain signature. 204 215 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_02590 3e47d9f1f8db13046d34cdcd2b967fee 546 Pfam PF13193 AMP-binding enzyme C-terminal domain 462 538 9.9E-19 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_02590 3e47d9f1f8db13046d34cdcd2b967fee 546 Pfam PF00501 AMP-binding enzyme 26 452 2.1E-96 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_05205 ef2a11316a24f0650cbfa4e85d34ad5e 364 SUPERFAMILY SSF50331 240 335 9.64E-5 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal P40_05205 ef2a11316a24f0650cbfa4e85d34ad5e 364 Gene3D G3DSA:3.40.50.300 2 255 1.2E-79 T 13-10-2018 P40_05205 ef2a11316a24f0650cbfa4e85d34ad5e 364 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 1.1E-115 T 13-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 P40_05205 ef2a11316a24f0650cbfa4e85d34ad5e 364 SMART SM00382 27 214 2.6E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_05205 ef2a11316a24f0650cbfa4e85d34ad5e 364 Pfam PF12857 TOBE-like domain 289 346 1.2E-9 T 13-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 P40_05205 ef2a11316a24f0650cbfa4e85d34ad5e 364 Pfam PF00005 ABC transporter 18 164 1.2E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_05205 ef2a11316a24f0650cbfa4e85d34ad5e 364 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_05205 ef2a11316a24f0650cbfa4e85d34ad5e 364 SUPERFAMILY SSF52540 3 243 3.47E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07075 f79a3f44d1d9d82760fa0de5c675ed0a 85 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 2.8E-19 T 13-10-2018 IPR005631 Flavinator of succinate dehydrogenase P40_07075 f79a3f44d1d9d82760fa0de5c675ed0a 85 Gene3D G3DSA:1.10.150.250 3 82 5.8E-23 T 13-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily P40_07075 f79a3f44d1d9d82760fa0de5c675ed0a 85 SUPERFAMILY SSF109910 6 78 1.02E-18 T 13-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily P40_01505 f6050edf09e49c1405d7759444540f39 163 SUPERFAMILY SSF46689 14 63 2.28E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_01505 f6050edf09e49c1405d7759444540f39 163 SMART SM00342 30 113 1.1E-26 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_01505 f6050edf09e49c1405d7759444540f39 163 Gene3D G3DSA:1.10.10.60 68 124 2.1E-14 T 13-10-2018 P40_01505 f6050edf09e49c1405d7759444540f39 163 Pfam PF12833 Helix-turn-helix domain 36 113 3.2E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_01505 f6050edf09e49c1405d7759444540f39 163 Gene3D G3DSA:1.10.10.60 10 67 7.7E-10 T 13-10-2018 P40_01505 f6050edf09e49c1405d7759444540f39 163 SUPERFAMILY SSF46689 66 115 8.96E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_14225 411f896d1494d036a61170d48c0be1a8 54 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 12 45 2.4E-9 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 P40_07920 8d230dda6d5d53a5230d3182fcce85aa 710 Pfam PF13380 CoA binding domain 25 148 5.6E-21 T 13-10-2018 IPR003781 CoA-binding GO:0048037 P40_07920 8d230dda6d5d53a5230d3182fcce85aa 710 Gene3D G3DSA:3.30.470.20 494 704 2.4E-78 T 13-10-2018 P40_07920 8d230dda6d5d53a5230d3182fcce85aa 710 Gene3D G3DSA:3.30.1490.20 510 587 2.4E-78 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_07920 8d230dda6d5d53a5230d3182fcce85aa 710 SUPERFAMILY SSF56059 494 707 9.19E-42 T 13-10-2018 P40_07920 8d230dda6d5d53a5230d3182fcce85aa 710 Gene3D G3DSA:3.40.50.261 314 476 4.3E-19 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_07920 8d230dda6d5d53a5230d3182fcce85aa 710 Pfam PF13549 ATP-grasp domain 493 706 4.3E-66 T 13-10-2018 P40_07920 8d230dda6d5d53a5230d3182fcce85aa 710 SUPERFAMILY SSF52210 315 467 9.03E-18 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_07920 8d230dda6d5d53a5230d3182fcce85aa 710 Gene3D G3DSA:3.40.50.261 147 309 9.6E-41 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_07920 8d230dda6d5d53a5230d3182fcce85aa 710 SUPERFAMILY SSF51735 19 146 2.13E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_07920 8d230dda6d5d53a5230d3182fcce85aa 710 SUPERFAMILY SSF52210 157 309 8.11E-37 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P40_07920 8d230dda6d5d53a5230d3182fcce85aa 710 Gene3D G3DSA:3.40.50.720 16 145 8.0E-41 T 13-10-2018 P40_07920 8d230dda6d5d53a5230d3182fcce85aa 710 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 171 308 4.5E-40 T 13-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain P40_07920 8d230dda6d5d53a5230d3182fcce85aa 710 SMART SM00881 21 116 2.3E-33 T 13-10-2018 IPR003781 CoA-binding GO:0048037 P40_18535 beb7fde3f38888cdbddde6ae8e2f6e94 173 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 86 97 - T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 P40_18535 beb7fde3f38888cdbddde6ae8e2f6e94 173 Gene3D G3DSA:3.30.70.560 1 154 4.3E-54 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 P40_18535 beb7fde3f38888cdbddde6ae8e2f6e94 173 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 131 3.0E-40 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 P40_18535 beb7fde3f38888cdbddde6ae8e2f6e94 173 SUPERFAMILY SSF55083 2 152 3.01E-51 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 P40_18535 beb7fde3f38888cdbddde6ae8e2f6e94 173 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 4 131 4.7E-36 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 P40_01035 437c7ad590395e2156b2570df1825bef 435 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 431 8.0E-91 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_01035 437c7ad590395e2156b2570df1825bef 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 425 3.5E-86 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_01035 437c7ad590395e2156b2570df1825bef 435 PIRSF PIRSF006066 5 435 1.2E-85 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_16585 5e841033ba908483f5abbd96a64fbd34 201 SUPERFAMILY SSF46689 4 75 1.39E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_16585 5e841033ba908483f5abbd96a64fbd34 201 SUPERFAMILY SSF48498 82 174 8.9E-22 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_16585 5e841033ba908483f5abbd96a64fbd34 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 5.3E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_16585 5e841033ba908483f5abbd96a64fbd34 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 5.3E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_16585 5e841033ba908483f5abbd96a64fbd34 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 1.8E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_16585 5e841033ba908483f5abbd96a64fbd34 201 Pfam PF13305 WHG domain 87 171 1.1E-18 T 13-10-2018 IPR025996 WHG domain P40_16585 5e841033ba908483f5abbd96a64fbd34 201 Gene3D G3DSA:1.10.357.10 1 191 1.7E-53 T 13-10-2018 P40_08280 ce1928aa9567eb81bb0961559a14232b 140 SUPERFAMILY SSF50249 13 127 3.77E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_08280 ce1928aa9567eb81bb0961559a14232b 140 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 58 123 5.0E-15 T 13-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal P40_08280 ce1928aa9567eb81bb0961559a14232b 140 Gene3D G3DSA:1.10.12.20 14 60 8.5E-7 T 13-10-2018 P40_08280 ce1928aa9567eb81bb0961559a14232b 140 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 21 55 5.0E-11 T 13-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal P40_03650 44f4bcfd7aac1308f60e8982d105d9da 353 SUPERFAMILY SSF117892 195 254 7.32E-9 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily P40_03650 44f4bcfd7aac1308f60e8982d105d9da 353 TIGRFAM TIGR01932 hflC: HflC protein 10 347 1.1E-79 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 P40_03650 44f4bcfd7aac1308f60e8982d105d9da 353 SMART SM00244 21 247 3.3E-21 T 13-10-2018 IPR001107 Band 7 domain P40_03650 44f4bcfd7aac1308f60e8982d105d9da 353 Pfam PF01145 SPFH domain / Band 7 family 25 262 4.1E-24 T 13-10-2018 IPR001107 Band 7 domain P40_03650 44f4bcfd7aac1308f60e8982d105d9da 353 Gene3D G3DSA:3.30.479.30 51 165 7.4E-11 T 13-10-2018 P40_03650 44f4bcfd7aac1308f60e8982d105d9da 353 PIRSF PIRSF005651 1 352 5.1E-89 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 P40_03650 44f4bcfd7aac1308f60e8982d105d9da 353 SUPERFAMILY SSF117892 53 146 4.32E-14 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily P40_21355 25009262f4c1220fa01a51b7430a8f60 395 Gene3D G3DSA:1.25.40.10 27 220 3.2E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_21355 25009262f4c1220fa01a51b7430a8f60 395 SUPERFAMILY SSF48452 47 187 4.43E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_10010 05ea6635433e45b7d047f5e1f87baeab 755 SMART SM00487 65 418 1.2E-6 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_10010 05ea6635433e45b7d047f5e1f87baeab 755 Gene3D G3DSA:3.40.50.10810 73 168 1.3E-7 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily P40_10010 05ea6635433e45b7d047f5e1f87baeab 755 SUPERFAMILY SSF52540 347 732 8.21E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10010 05ea6635433e45b7d047f5e1f87baeab 755 Gene3D G3DSA:3.40.50.300 491 750 5.3E-22 T 13-10-2018 P40_10010 05ea6635433e45b7d047f5e1f87baeab 755 Gene3D G3DSA:3.40.50.10810 299 462 5.6E-8 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily P40_10010 05ea6635433e45b7d047f5e1f87baeab 755 SUPERFAMILY SSF52540 67 405 9.3E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10010 05ea6635433e45b7d047f5e1f87baeab 755 Pfam PF00271 Helicase conserved C-terminal domain 581 691 9.6E-5 T 13-10-2018 IPR001650 Helicase, C-terminal P40_09405 d90161548f6a293dcfcbd0349128f1c1 214 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 14 198 2.0E-32 T 13-10-2018 P40_09405 d90161548f6a293dcfcbd0349128f1c1 214 SUPERFAMILY SSF101322 9 207 5.75E-51 T 13-10-2018 IPR035932 HflD-like superfamily P40_09405 d90161548f6a293dcfcbd0349128f1c1 214 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 5 210 28.165 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD P40_09405 d90161548f6a293dcfcbd0349128f1c1 214 Gene3D G3DSA:1.10.3890.10 7 212 3.4E-58 T 13-10-2018 IPR035932 HflD-like superfamily P40_09405 d90161548f6a293dcfcbd0349128f1c1 214 Pfam PF04356 Protein of unknown function (DUF489) 12 202 2.5E-59 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD P40_14115 46d9b03538a140483821b030e1a42b0a 451 Pfam PF00860 Permease family 37 289 1.1E-8 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 P40_20285 df701331c048cb2177a9166d912a775f 688 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 61 508 1.9E-157 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 P40_20285 df701331c048cb2177a9166d912a775f 688 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 23 507 7.3E-182 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 P40_06105 f3ff3b42c45c21a913c691b6a6bdaf4e 400 SUPERFAMILY SSF103473 16 391 1.05E-55 T 13-10-2018 IPR036259 MFS transporter superfamily P40_06105 f3ff3b42c45c21a913c691b6a6bdaf4e 400 Pfam PF07690 Major Facilitator Superfamily 26 357 9.3E-34 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_06105 f3ff3b42c45c21a913c691b6a6bdaf4e 400 Gene3D G3DSA:1.20.1250.20 16 392 1.0E-42 T 13-10-2018 P40_15980 0ce46aa6ffd697a42fc706d8084b9170 95 Gene3D G3DSA:3.40.1690.10 9 88 4.8E-23 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal P40_15980 0ce46aa6ffd697a42fc706d8084b9170 95 Pfam PF01312 FlhB HrpN YscU SpaS Family 12 83 4.3E-17 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 P40_15980 0ce46aa6ffd697a42fc706d8084b9170 95 SUPERFAMILY SSF160544 10 87 2.35E-21 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal P40_16035 feefae79969cd56829091f2e5ef14690 338 Pfam PF14841 FliG middle domain 123 193 4.2E-25 T 13-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain P40_16035 feefae79969cd56829091f2e5ef14690 338 Pfam PF01706 FliG C-terminal domain 225 330 1.5E-38 T 13-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal P40_16035 feefae79969cd56829091f2e5ef14690 338 Gene3D G3DSA:1.10.220.30 6 87 6.1E-20 T 13-10-2018 P40_16035 feefae79969cd56829091f2e5ef14690 338 Gene3D G3DSA:1.10.220.30 201 337 2.7E-43 T 13-10-2018 P40_16035 feefae79969cd56829091f2e5ef14690 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 274 7.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 P40_16035 feefae79969cd56829091f2e5ef14690 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 232 252 7.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 P40_16035 feefae79969cd56829091f2e5ef14690 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 304 7.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 P40_16035 feefae79969cd56829091f2e5ef14690 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 201 226 7.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 P40_16035 feefae79969cd56829091f2e5ef14690 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 121 144 7.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 P40_16035 feefae79969cd56829091f2e5ef14690 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 11 27 7.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 P40_16035 feefae79969cd56829091f2e5ef14690 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 40 66 7.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 P40_16035 feefae79969cd56829091f2e5ef14690 338 SUPERFAMILY SSF48029 121 331 1.24E-63 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical P40_16035 feefae79969cd56829091f2e5ef14690 338 Pfam PF14842 FliG N-terminal domain 12 108 4.6E-29 T 13-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain P40_16035 feefae79969cd56829091f2e5ef14690 338 Gene3D G3DSA:1.10.220.30 96 199 7.2E-25 T 13-10-2018 P40_16035 feefae79969cd56829091f2e5ef14690 338 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 11 338 1.2E-117 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 P40_16035 feefae79969cd56829091f2e5ef14690 338 PIRSF PIRSF003161 5 338 1.2E-115 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 P40_16035 feefae79969cd56829091f2e5ef14690 338 SUPERFAMILY SSF48029 12 108 6.8E-20 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical P40_08020 6c12e37e25287cbfcbd72c1b0d8c667b 324 Pfam PF00107 Zinc-binding dehydrogenase 152 270 2.0E-29 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 P40_08020 6c12e37e25287cbfcbd72c1b0d8c667b 324 SUPERFAMILY SSF50129 2 145 1.19E-37 T 13-10-2018 IPR011032 GroES-like superfamily P40_08020 6c12e37e25287cbfcbd72c1b0d8c667b 324 SUPERFAMILY SSF51735 113 272 9.6E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_08020 6c12e37e25287cbfcbd72c1b0d8c667b 324 SMART SM00829 11 322 1.4E-43 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P40_08020 6c12e37e25287cbfcbd72c1b0d8c667b 324 Gene3D G3DSA:3.90.180.10 12 318 6.2E-110 T 13-10-2018 P40_08020 6c12e37e25287cbfcbd72c1b0d8c667b 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 4.1E-9 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P40_08020 6c12e37e25287cbfcbd72c1b0d8c667b 324 Gene3D G3DSA:3.40.50.720 124 268 6.2E-110 T 13-10-2018 P40_16315 c4ea8fd651b5cf6804e5e59a15201cf3 182 SUPERFAMILY SSF55846 7 179 1.83E-64 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 P40_16315 c4ea8fd651b5cf6804e5e59a15201cf3 182 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 32 172 2.3E-26 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 P40_16315 c4ea8fd651b5cf6804e5e59a15201cf3 182 Gene3D G3DSA:3.40.80.10 5 181 2.2E-58 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 P40_16315 c4ea8fd651b5cf6804e5e59a15201cf3 182 SMART SM00644 20 171 1.4E-52 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 P40_18875 434c99116b874f951becc102ba665d33 523 Gene3D G3DSA:4.10.450.10 42 205 1.3E-156 T 13-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 P40_18875 434c99116b874f951becc102ba665d33 523 PIRSF PIRSF000137 330 523 3.8E-41 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_18875 434c99116b874f951becc102ba665d33 523 PIRSF PIRSF000137 1 356 1.7E-88 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_18875 434c99116b874f951becc102ba665d33 523 Gene3D G3DSA:3.30.410.40 156 459 1.3E-156 T 13-10-2018 P40_18875 434c99116b874f951becc102ba665d33 523 SUPERFAMILY SSF51905 7 521 1.4E-73 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_18875 434c99116b874f951becc102ba665d33 523 Gene3D G3DSA:1.10.1220.110 100 155 1.3E-156 T 13-10-2018 P40_18875 434c99116b874f951becc102ba665d33 523 SUPERFAMILY SSF54373 299 462 8.83E-26 T 13-10-2018 P40_18875 434c99116b874f951becc102ba665d33 523 Gene3D G3DSA:3.50.50.60 9 516 1.3E-156 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_18875 434c99116b874f951becc102ba665d33 523 Pfam PF00732 GMC oxidoreductase 9 304 7.1E-71 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_18875 434c99116b874f951becc102ba665d33 523 Pfam PF05199 GMC oxidoreductase 378 512 8.0E-32 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 P40_18875 434c99116b874f951becc102ba665d33 523 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 263 277 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_18875 434c99116b874f951becc102ba665d33 523 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 85 108 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_01410 298da3c5c0c1060e9709127b22436a64 489 Gene3D G3DSA:3.40.640.10 87 317 1.3E-57 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_01410 298da3c5c0c1060e9709127b22436a64 489 SUPERFAMILY SSF53383 23 487 7.83E-107 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_01410 298da3c5c0c1060e9709127b22436a64 489 Gene3D G3DSA:3.90.1150.10 340 474 2.5E-39 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_01410 298da3c5c0c1060e9709127b22436a64 489 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 5 489 55.22 T 13-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 P40_01410 298da3c5c0c1060e9709127b22436a64 489 Pfam PF02347 Glycine cleavage system P-protein 31 371 9.9E-11 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 P40_09880 844f644fff7be237f65cf218d2036d62 393 Pfam PF00108 Thiolase, N-terminal domain 12 112 4.7E-13 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 P40_09880 844f644fff7be237f65cf218d2036d62 393 ProSitePatterns PS00737 Thiolases signature 2. 332 348 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 P40_09880 844f644fff7be237f65cf218d2036d62 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 78 96 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 P40_09880 844f644fff7be237f65cf218d2036d62 393 SUPERFAMILY SSF53901 5 233 4.26E-47 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_09880 844f644fff7be237f65cf218d2036d62 393 SUPERFAMILY SSF53901 259 381 1.1E-28 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_09880 844f644fff7be237f65cf218d2036d62 393 PIRSF PIRSF000429 1 392 2.2E-61 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_09880 844f644fff7be237f65cf218d2036d62 393 Pfam PF02803 Thiolase, C-terminal domain 270 362 8.5E-10 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_09880 844f644fff7be237f65cf218d2036d62 393 Gene3D G3DSA:3.40.47.10 5 392 6.7E-115 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_17005 c7c36fd708e1f5240b8ec714497877ea 179 Pfam PF01292 Prokaryotic cytochrome b561 7 175 1.2E-25 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 P40_17005 c7c36fd708e1f5240b8ec714497877ea 179 SUPERFAMILY SSF81342 3 176 4.79E-25 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 P40_01280 66107033898cde0c975c13bc362a00f3 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 155 162 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01280 66107033898cde0c975c13bc362a00f3 339 SMART SM00846 2 157 9.5E-57 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01280 66107033898cde0c975c13bc362a00f3 339 Gene3D G3DSA:3.40.50.720 3 329 2.1E-111 T 13-10-2018 P40_01280 66107033898cde0c975c13bc362a00f3 339 SUPERFAMILY SSF55347 157 317 3.74E-50 T 13-10-2018 P40_01280 66107033898cde0c975c13bc362a00f3 339 PIRSF PIRSF000149 1 338 4.1E-101 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01280 66107033898cde0c975c13bc362a00f3 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 151 169 8.7E-27 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01280 66107033898cde0c975c13bc362a00f3 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 273 288 8.7E-27 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01280 66107033898cde0c975c13bc362a00f3 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 114 127 8.7E-27 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01280 66107033898cde0c975c13bc362a00f3 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 234 251 8.7E-27 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01280 66107033898cde0c975c13bc362a00f3 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 178 194 8.7E-27 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01280 66107033898cde0c975c13bc362a00f3 339 Gene3D G3DSA:3.30.360.10 156 318 2.1E-111 T 13-10-2018 P40_01280 66107033898cde0c975c13bc362a00f3 339 SUPERFAMILY SSF51735 2 173 1.13E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_01280 66107033898cde0c975c13bc362a00f3 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 162 316 4.4E-44 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_01280 66107033898cde0c975c13bc362a00f3 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 106 4.6E-26 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P40_13705 fd2a380a3675d6c1f71469151bcba12f 103 Pfam PF10052 Protein of unknown function (DUF2288) 10 98 1.2E-33 T 13-10-2018 IPR018741 Protein of unknown function DUF2288 P40_11935 0f13e02cbb24340effde5f2eaa38d5ae 496 SUPERFAMILY SSF52374 3 307 1.69E-109 T 13-10-2018 P40_11935 0f13e02cbb24340effde5f2eaa38d5ae 496 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 470 29.778 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 P40_11935 0f13e02cbb24340effde5f2eaa38d5ae 496 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 319 1.0E-104 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 P40_11935 0f13e02cbb24340effde5f2eaa38d5ae 496 Gene3D G3DSA:3.40.50.620 1 328 2.4E-142 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_11935 0f13e02cbb24340effde5f2eaa38d5ae 496 Gene3D G3DSA:1.10.10.350 370 493 7.5E-27 T 13-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 P40_11935 0f13e02cbb24340effde5f2eaa38d5ae 496 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.7E-22 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P40_11935 0f13e02cbb24340effde5f2eaa38d5ae 496 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.7E-22 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P40_11935 0f13e02cbb24340effde5f2eaa38d5ae 496 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.7E-22 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P40_11935 0f13e02cbb24340effde5f2eaa38d5ae 496 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 202 1.7E-22 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P40_11935 0f13e02cbb24340effde5f2eaa38d5ae 496 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 216 1.7E-22 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P40_11935 0f13e02cbb24340effde5f2eaa38d5ae 496 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P40_11935 0f13e02cbb24340effde5f2eaa38d5ae 496 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 468 2.6E-133 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 P40_11935 0f13e02cbb24340effde5f2eaa38d5ae 496 SUPERFAMILY SSF48163 313 470 1.96E-36 T 13-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 P40_00600 66a5fdcefc851996de706e779e006920 267 Gene3D G3DSA:1.10.12.10 210 266 2.7E-20 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_00600 66a5fdcefc851996de706e779e006920 267 Gene3D G3DSA:3.90.226.10 1 209 1.5E-70 T 13-10-2018 P40_00600 66a5fdcefc851996de706e779e006920 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 266 5.5E-65 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_00600 66a5fdcefc851996de706e779e006920 267 SUPERFAMILY SSF52096 1 266 6.74E-89 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_07685 62c6962bd9cd91e1fac3a685b7e6efbe 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.1E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07685 62c6962bd9cd91e1fac3a685b7e6efbe 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.1E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07685 62c6962bd9cd91e1fac3a685b7e6efbe 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07685 62c6962bd9cd91e1fac3a685b7e6efbe 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.1E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07685 62c6962bd9cd91e1fac3a685b7e6efbe 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.1E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07685 62c6962bd9cd91e1fac3a685b7e6efbe 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.1E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07685 62c6962bd9cd91e1fac3a685b7e6efbe 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 6.8E-71 T 13-10-2018 P40_07685 62c6962bd9cd91e1fac3a685b7e6efbe 262 SUPERFAMILY SSF51735 6 253 1.75E-83 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_07685 62c6962bd9cd91e1fac3a685b7e6efbe 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_07685 62c6962bd9cd91e1fac3a685b7e6efbe 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.7E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07685 62c6962bd9cd91e1fac3a685b7e6efbe 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.7E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07685 62c6962bd9cd91e1fac3a685b7e6efbe 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.7E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07685 62c6962bd9cd91e1fac3a685b7e6efbe 262 Gene3D G3DSA:3.40.50.720 1 257 3.1E-85 T 13-10-2018 P40_09885 b0595efc715aac57c457ea82e1a128b8 306 Gene3D G3DSA:3.40.50.1820 18 303 7.6E-63 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_09885 b0595efc715aac57c457ea82e1a128b8 306 PRINTS PR00412 Epoxide hydrolase signature 65 80 6.8E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_09885 b0595efc715aac57c457ea82e1a128b8 306 PRINTS PR00412 Epoxide hydrolase signature 277 299 6.8E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_09885 b0595efc715aac57c457ea82e1a128b8 306 PRINTS PR00412 Epoxide hydrolase signature 125 138 6.8E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_09885 b0595efc715aac57c457ea82e1a128b8 306 Pfam PF12146 Serine aminopeptidase, S33 38 287 3.1E-19 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 P40_09885 b0595efc715aac57c457ea82e1a128b8 306 SUPERFAMILY SSF53474 20 298 1.88E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_04155 68b540dff303f09daa65160940d9b484 201 SMART SM00479 30 201 1.2E-17 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III P40_04155 68b540dff303f09daa65160940d9b484 201 Gene3D G3DSA:3.30.420.10 22 201 3.4E-26 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_04155 68b540dff303f09daa65160940d9b484 201 Pfam PF00929 Exonuclease 32 192 6.8E-15 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III P40_04155 68b540dff303f09daa65160940d9b484 201 SUPERFAMILY SSF53098 25 199 2.23E-30 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_04615 e336549c656025914e45419934326da9 168 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 130 2.3E-29 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 P40_04615 e336549c656025914e45419934326da9 168 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 85 96 - T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 P40_04615 e336549c656025914e45419934326da9 168 Gene3D G3DSA:3.30.70.560 1 156 1.8E-40 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 P40_04615 e336549c656025914e45419934326da9 168 SUPERFAMILY SSF55083 1 156 2.88E-44 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 P40_04615 e336549c656025914e45419934326da9 168 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 130 3.6E-27 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 P40_11050 3239925fafb962018382f5b9723a150d 359 SUPERFAMILY SSF51735 11 149 3.17E-17 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_11050 3239925fafb962018382f5b9723a150d 359 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 14 130 2.9E-14 T 13-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 P40_11050 3239925fafb962018382f5b9723a150d 359 Gene3D G3DSA:3.40.50.720 14 154 3.3E-28 T 13-10-2018 P40_08890 147321b4ae8ccc479892413a9d635394 677 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 510 8.4E-164 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 P40_08890 147321b4ae8ccc479892413a9d635394 677 ProSitePatterns PS01303 BCCT family of transporters signature. 327 336 - T 13-10-2018 IPR018093 BCCT transporter, conserved site P40_08890 147321b4ae8ccc479892413a9d635394 677 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 508 1.6E-196 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 P40_04740 7b1b69a3110414177ba9fc506e03711a 129 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 24 119 3.3E-34 T 13-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 P40_04740 7b1b69a3110414177ba9fc506e03711a 129 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 30 103 4.9E-18 T 13-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 P40_18210 01f1b517913cfa971e83f3293d21e60f 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 9 84 24.35 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18210 01f1b517913cfa971e83f3293d21e60f 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 80 2.9E-36 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18210 01f1b517913cfa971e83f3293d21e60f 89 Pfam PF00366 Ribosomal protein S17 14 80 5.1E-32 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18210 01f1b517913cfa971e83f3293d21e60f 89 SUPERFAMILY SSF50249 9 86 2.18E-31 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_18210 01f1b517913cfa971e83f3293d21e60f 89 PRINTS PR00973 Ribosomal protein S17 family signature 28 51 1.5E-12 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18210 01f1b517913cfa971e83f3293d21e60f 89 PRINTS PR00973 Ribosomal protein S17 family signature 70 77 1.5E-12 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18210 01f1b517913cfa971e83f3293d21e60f 89 PRINTS PR00973 Ribosomal protein S17 family signature 60 70 1.5E-12 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18210 01f1b517913cfa971e83f3293d21e60f 89 Gene3D G3DSA:2.40.50.140 5 88 3.3E-35 T 13-10-2018 P40_18210 01f1b517913cfa971e83f3293d21e60f 89 ProSitePatterns PS00056 Ribosomal protein S17 signature. 60 72 - T 13-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P40_18210 01f1b517913cfa971e83f3293d21e60f 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 10 80 2.0E-25 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_15995 50b2fa0f5a6e5afe00d658bdd878162e 141 TIGRFAM TIGR00208 fliS: flagellar protein FliS 10 132 3.6E-30 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 P40_15995 50b2fa0f5a6e5afe00d658bdd878162e 141 Gene3D G3DSA:1.20.120.340 9 137 2.1E-35 T 13-10-2018 P40_15995 50b2fa0f5a6e5afe00d658bdd878162e 141 Pfam PF02561 Flagellar protein FliS 16 132 1.6E-33 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 P40_15995 50b2fa0f5a6e5afe00d658bdd878162e 141 SUPERFAMILY SSF101116 16 134 1.57E-34 T 13-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 P40_15995 50b2fa0f5a6e5afe00d658bdd878162e 141 PIRSF PIRSF039090 9 140 2.7E-37 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 P40_14060 7324b69872fb7cf49a27181b1f556d9f 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 2 283 1.7E-37 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_14060 7324b69872fb7cf49a27181b1f556d9f 328 Gene3D G3DSA:3.40.190.170 1 297 2.9E-61 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_19900 8afbb0c040d6886c6059b860b334c56e 260 Gene3D G3DSA:3.40.50.720 1 255 1.5E-68 T 13-10-2018 P40_19900 8afbb0c040d6886c6059b860b334c56e 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 3.2E-4 T 13-10-2018 P40_19900 8afbb0c040d6886c6059b860b334c56e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19900 8afbb0c040d6886c6059b860b334c56e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19900 8afbb0c040d6886c6059b860b334c56e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19900 8afbb0c040d6886c6059b860b334c56e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.3E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19900 8afbb0c040d6886c6059b860b334c56e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.3E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19900 8afbb0c040d6886c6059b860b334c56e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.3E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19900 8afbb0c040d6886c6059b860b334c56e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.3E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19900 8afbb0c040d6886c6059b860b334c56e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.3E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19900 8afbb0c040d6886c6059b860b334c56e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.3E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19900 8afbb0c040d6886c6059b860b334c56e 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_19900 8afbb0c040d6886c6059b860b334c56e 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 252 1.1E-51 T 13-10-2018 P40_19900 8afbb0c040d6886c6059b860b334c56e 260 SUPERFAMILY SSF51735 4 253 3.14E-64 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_19195 d7866fa33783ba7728adaee2df242736 234 SUPERFAMILY SSF52540 2 231 2.13E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_19195 d7866fa33783ba7728adaee2df242736 234 Pfam PF00005 ABC transporter 17 162 6.8E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_19195 d7866fa33783ba7728adaee2df242736 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_19195 d7866fa33783ba7728adaee2df242736 234 Gene3D G3DSA:3.40.50.300 1 234 7.3E-59 T 13-10-2018 P40_19195 d7866fa33783ba7728adaee2df242736 234 SMART SM00382 26 211 1.4E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_08035 1b2895d3c4439702ff6bfd9274275103 499 Gene3D G3DSA:2.40.160.130 29 462 2.2E-125 T 13-10-2018 IPR038636 Capsule assembly protein Wzi superfamily P40_08035 1b2895d3c4439702ff6bfd9274275103 499 Pfam PF14052 Capsule assembly protein Wzi 98 469 9.6E-93 T 13-10-2018 IPR026950 Capsule assembly protein Wzi P40_12160 336fd7ad5e2d7415ca20ccc1d477535e 179 Pfam PF02954 Bacterial regulatory protein, Fis family 141 174 1.6E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_12160 336fd7ad5e2d7415ca20ccc1d477535e 179 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 141 158 3.9E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_12160 336fd7ad5e2d7415ca20ccc1d477535e 179 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 158 178 3.9E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_12160 336fd7ad5e2d7415ca20ccc1d477535e 179 Gene3D G3DSA:1.10.10.60 125 178 2.0E-21 T 13-10-2018 P40_12160 336fd7ad5e2d7415ca20ccc1d477535e 179 SUPERFAMILY SSF46689 103 174 2.08E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_12160 336fd7ad5e2d7415ca20ccc1d477535e 179 Gene3D G3DSA:3.40.50.2300 7 124 2.7E-27 T 13-10-2018 P40_12160 336fd7ad5e2d7415ca20ccc1d477535e 179 SMART SM00448 6 117 1.7E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_12160 336fd7ad5e2d7415ca20ccc1d477535e 179 Pfam PF00072 Response regulator receiver domain 9 117 1.1E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_12160 336fd7ad5e2d7415ca20ccc1d477535e 179 SUPERFAMILY SSF52172 5 126 1.02E-29 T 13-10-2018 IPR011006 CheY-like superfamily P40_01585 0a337fdf46b96958d812fb8e3f8b7512 345 SUPERFAMILY SSF103473 11 285 2.75E-31 T 13-10-2018 IPR036259 MFS transporter superfamily P40_01585 0a337fdf46b96958d812fb8e3f8b7512 345 Gene3D G3DSA:1.20.1250.20 12 291 2.4E-25 T 13-10-2018 P40_01585 0a337fdf46b96958d812fb8e3f8b7512 345 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 26 276 1.4E-40 T 13-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB P40_00390 b8f299244b8ba4a4141b4562ac77135e 427 SUPERFAMILY SSF51338 6 424 2.16E-20 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_00390 b8f299244b8ba4a4141b4562ac77135e 427 Pfam PF01979 Amidohydrolase family 56 422 7.7E-18 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P40_00390 b8f299244b8ba4a4141b4562ac77135e 427 Gene3D G3DSA:3.20.20.140 60 371 2.0E-107 T 13-10-2018 P40_00390 b8f299244b8ba4a4141b4562ac77135e 427 Gene3D G3DSA:2.30.40.10 13 422 2.0E-107 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_00390 b8f299244b8ba4a4141b4562ac77135e 427 SUPERFAMILY SSF51556 59 370 2.53E-82 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_00390 b8f299244b8ba4a4141b4562ac77135e 427 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 25 422 9.9E-85 T 13-10-2018 P40_17865 17bf170065b042292b7d21cbf209c9ac 162 SUPERFAMILY SSF54523 4 138 1.18E-7 T 13-10-2018 P40_17865 17bf170065b042292b7d21cbf209c9ac 162 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 2 22 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_17865 17bf170065b042292b7d21cbf209c9ac 162 Pfam PF12019 Type II transport protein GspH 39 148 5.8E-8 T 13-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 P40_08845 fb7bf4be1117453ffe6a06bdd7a5f5b4 305 Pfam PF03466 LysR substrate binding domain 89 294 9.2E-42 T 13-10-2018 IPR005119 LysR, substrate-binding P40_08845 fb7bf4be1117453ffe6a06bdd7a5f5b4 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.5E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_08845 fb7bf4be1117453ffe6a06bdd7a5f5b4 305 Gene3D G3DSA:1.10.10.10 3 85 1.9E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_08845 fb7bf4be1117453ffe6a06bdd7a5f5b4 305 SUPERFAMILY SSF53850 89 296 1.71E-42 T 13-10-2018 P40_08845 fb7bf4be1117453ffe6a06bdd7a5f5b4 305 Gene3D G3DSA:3.40.190.10 92 290 1.8E-60 T 13-10-2018 P40_08845 fb7bf4be1117453ffe6a06bdd7a5f5b4 305 Gene3D G3DSA:3.40.190.10 163 265 1.8E-60 T 13-10-2018 P40_08845 fb7bf4be1117453ffe6a06bdd7a5f5b4 305 SUPERFAMILY SSF46785 5 112 7.61E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_16280 781571c50303c9b3e5143992badde7da 189 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 20 183 3.0E-38 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 P40_16280 781571c50303c9b3e5143992badde7da 189 Gene3D G3DSA:1.20.1200.10 23 188 3.2E-57 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 P40_16280 781571c50303c9b3e5143992badde7da 189 Pfam PF01923 Cobalamin adenosyltransferase 14 171 1.1E-53 T 13-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 P40_16280 781571c50303c9b3e5143992badde7da 189 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 16 183 4.0E-56 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 P40_16280 781571c50303c9b3e5143992badde7da 189 SUPERFAMILY SSF89028 13 184 3.34E-56 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 P40_11600 d69270b78612cbba2ad50f513a1d66e1 415 Gene3D G3DSA:3.30.1540.10 246 336 4.0E-130 T 13-10-2018 P40_11600 d69270b78612cbba2ad50f513a1d66e1 415 Gene3D G3DSA:3.40.50.10540 11 403 4.0E-130 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_11600 d69270b78612cbba2ad50f513a1d66e1 415 SUPERFAMILY SSF89796 10 409 3.14E-127 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_11600 d69270b78612cbba2ad50f513a1d66e1 415 Pfam PF02515 CoA-transferase family III 12 386 3.2E-125 T 13-10-2018 IPR003673 CoA-transferase family III GO:0003824 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 Gene3D G3DSA:3.30.499.10 327 470 5.4E-50 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 Gene3D G3DSA:3.30.499.20 5 289 2.0E-98 T 13-10-2018 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 470 59.989 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 ProSitePatterns PS01244 Aconitase family signature 2. 403 416 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 469 9.1E-234 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 ProSitePatterns PS00450 Aconitase family signature 1. 342 358 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 Pfam PF00330 Aconitase family (aconitate hydratase) 8 461 2.9E-159 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 PRINTS PR00415 Aconitase family signature 212 225 2.7E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 PRINTS PR00415 Aconitase family signature 122 135 2.7E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 PRINTS PR00415 Aconitase family signature 136 151 2.7E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 PRINTS PR00415 Aconitase family signature 198 211 2.7E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 PRINTS PR00415 Aconitase family signature 346 357 2.7E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 PRINTS PR00415 Aconitase family signature 85 98 2.7E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 PRINTS PR00415 Aconitase family signature 289 303 2.7E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 PRINTS PR00415 Aconitase family signature 111 119 2.7E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 PRINTS PR00415 Aconitase family signature 403 416 2.7E-45 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P40_12820 fb44ba5e09a161aedc2ea945e00ffe67 470 SUPERFAMILY SSF53732 2 469 4.84E-164 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 P40_13185 8bfd6779a4cb8aa705eff97e00d0c66d 412 PIRSF PIRSF000447 1 412 4.9E-189 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 P40_13185 8bfd6779a4cb8aa705eff97e00d0c66d 412 Gene3D G3DSA:3.40.47.10 257 401 6.0E-58 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_13185 8bfd6779a4cb8aa705eff97e00d0c66d 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site P40_13185 8bfd6779a4cb8aa705eff97e00d0c66d 412 SUPERFAMILY SSF53901 215 411 7.25E-74 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_13185 8bfd6779a4cb8aa705eff97e00d0c66d 412 SMART SM00825 Beta-ketoacyl synthase 6 412 2.1E-15 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain P40_13185 8bfd6779a4cb8aa705eff97e00d0c66d 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 7.3E-196 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 P40_13185 8bfd6779a4cb8aa705eff97e00d0c66d 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 6.0E-60 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal P40_13185 8bfd6779a4cb8aa705eff97e00d0c66d 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 5.0E-41 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal P40_13185 8bfd6779a4cb8aa705eff97e00d0c66d 412 Gene3D G3DSA:3.40.47.10 1 255 4.3E-90 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_13185 8bfd6779a4cb8aa705eff97e00d0c66d 412 SUPERFAMILY SSF53901 4 252 3.16E-78 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_06160 c804d2b70bd8b4f5830a72a156c6a4cf 126 Gene3D G3DSA:1.10.3990.20 8 115 4.8E-39 T 13-10-2018 IPR038268 Ribbon-helix-helix domain superfamily P40_06160 c804d2b70bd8b4f5830a72a156c6a4cf 126 Pfam PF13467 Ribbon-helix-helix domain 16 83 7.4E-23 T 13-10-2018 IPR027373 Ribbon-helix-helix domain P40_02250 933fb23f06769429032c6902155907de 276 SMART SM00342 169 251 3.1E-8 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_02250 933fb23f06769429032c6902155907de 276 Pfam PF12833 Helix-turn-helix domain 179 250 5.4E-13 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_02250 933fb23f06769429032c6902155907de 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 247 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 P40_02250 933fb23f06769429032c6902155907de 276 SUPERFAMILY SSF46689 152 202 2.78E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_02250 933fb23f06769429032c6902155907de 276 SUPERFAMILY SSF46689 206 250 8.51E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_02250 933fb23f06769429032c6902155907de 276 Gene3D G3DSA:1.10.10.60 150 252 4.3E-15 T 13-10-2018 P40_15450 b5a2c963d99bc4e831272902c9991a48 317 SUPERFAMILY SSF56281 34 315 3.28E-48 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_15450 b5a2c963d99bc4e831272902c9991a48 317 Pfam PF12706 Beta-lactamase superfamily domain 66 279 2.0E-16 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_15450 b5a2c963d99bc4e831272902c9991a48 317 SMART SM00849 53 255 2.7E-6 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_15450 b5a2c963d99bc4e831272902c9991a48 317 Gene3D G3DSA:3.60.15.10 34 317 3.1E-58 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_05385 64935cd144f0bdadd2b5f9f76fcd9b06 293 Pfam PF00510 Cytochrome c oxidase subunit III 6 292 3.5E-53 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05385 64935cd144f0bdadd2b5f9f76fcd9b06 293 SUPERFAMILY SSF81452 4 293 4.6E-80 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_05385 64935cd144f0bdadd2b5f9f76fcd9b06 293 Gene3D G3DSA:1.10.287.70 1 76 5.0E-18 T 13-10-2018 P40_05385 64935cd144f0bdadd2b5f9f76fcd9b06 293 Gene3D G3DSA:1.20.120.80 78 293 7.2E-63 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_01045 fff28143b4b2cb4464de3fcf25c71374 126 Gene3D G3DSA:3.40.50.1010 2 120 4.3E-6 T 13-10-2018 P40_01045 fff28143b4b2cb4464de3fcf25c71374 126 SUPERFAMILY SSF88723 3 121 7.01E-12 T 13-10-2018 IPR029060 PIN-like domain superfamily P40_08685 5bd34b98009ec0b4ccd9ade2f536d009 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 1.1E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_08685 5bd34b98009ec0b4ccd9ade2f536d009 208 SUPERFAMILY SSF46689 4 72 3.59E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_08685 5bd34b98009ec0b4ccd9ade2f536d009 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site P40_08685 5bd34b98009ec0b4ccd9ade2f536d009 208 SUPERFAMILY SSF48498 80 206 2.08E-33 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_08685 5bd34b98009ec0b4ccd9ade2f536d009 208 Gene3D G3DSA:1.10.357.10 1 208 6.4E-66 T 13-10-2018 P40_08685 5bd34b98009ec0b4ccd9ade2f536d009 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 3.6E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_08685 5bd34b98009ec0b4ccd9ade2f536d009 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 3.6E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_15260 2ac08392d2496cd677d72a7f8f11c011 407 SUPERFAMILY SSF52402 5 209 2.65E-50 T 13-10-2018 P40_15260 2ac08392d2496cd677d72a7f8f11c011 407 Gene3D G3DSA:3.40.50.620 7 177 5.1E-158 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_15260 2ac08392d2496cd677d72a7f8f11c011 407 Gene3D G3DSA:3.90.1260.10 65 358 5.1E-158 T 13-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 P40_15260 2ac08392d2496cd677d72a7f8f11c011 407 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 400 5.1E-141 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 P40_15260 2ac08392d2496cd677d72a7f8f11c011 407 Gene3D G3DSA:1.20.5.470 379 404 5.5E-10 T 13-10-2018 P40_15260 2ac08392d2496cd677d72a7f8f11c011 407 SUPERFAMILY SSF69864 178 401 3.01E-94 T 13-10-2018 P40_15260 2ac08392d2496cd677d72a7f8f11c011 407 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 404 52.552 T 13-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 P40_15260 2ac08392d2496cd677d72a7f8f11c011 407 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 118 129 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 P40_15260 2ac08392d2496cd677d72a7f8f11c011 407 Pfam PF00764 Arginosuccinate synthase 8 399 1.9E-155 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 P40_15260 2ac08392d2496cd677d72a7f8f11c011 407 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 P40_19130 24ea21126a7335b789d0477f34657d3d 233 SUPERFAMILY SSF52317 1 206 1.81E-53 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_19130 24ea21126a7335b789d0477f34657d3d 233 Gene3D G3DSA:3.40.50.880 1 228 1.3E-63 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_19130 24ea21126a7335b789d0477f34657d3d 233 Pfam PF00117 Glutamine amidotransferase class-I 27 179 6.7E-14 T 13-10-2018 IPR017926 Glutamine amidotransferase P40_15765 8b74818160d1554f7e37fecd69e32fea 395 Pfam PF07690 Major Facilitator Superfamily 13 356 1.2E-38 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_15765 8b74818160d1554f7e37fecd69e32fea 395 SUPERFAMILY SSF103473 4 389 3.01E-51 T 13-10-2018 IPR036259 MFS transporter superfamily P40_15765 8b74818160d1554f7e37fecd69e32fea 395 Gene3D G3DSA:1.20.1720.10 10 388 6.1E-86 T 13-10-2018 P40_15765 8b74818160d1554f7e37fecd69e32fea 395 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 11 384 6.8E-66 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 P40_03145 b68f84831e6234d0fbeda55810beed89 363 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 53 316 5.3E-31 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_03145 b68f84831e6234d0fbeda55810beed89 363 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 23 5.1E-8 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal P40_03145 b68f84831e6234d0fbeda55810beed89 363 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 25 7.9E-5 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal P40_03145 b68f84831e6234d0fbeda55810beed89 363 SUPERFAMILY SSF53850 132 268 3.98E-8 T 13-10-2018 P40_03145 b68f84831e6234d0fbeda55810beed89 363 Gene3D G3DSA:3.40.190.170 30 349 3.6E-62 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_03530 f86038dcad6b406f10769cd67edbc555 225 Pfam PF00857 Isochorismatase family 19 206 2.0E-41 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 P40_03530 f86038dcad6b406f10769cd67edbc555 225 Gene3D G3DSA:3.40.50.850 12 221 1.5E-53 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_03530 f86038dcad6b406f10769cd67edbc555 225 SUPERFAMILY SSF52499 10 212 1.22E-52 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 P40_19905 acc86d5507b4e5fd3580c1de54625137 106 Pfam PF11804 Protein of unknown function (DUF3325) 8 101 7.3E-19 T 13-10-2018 IPR021762 Protein of unknown function DUF3325 P40_13680 6432005ffe7a0283c739ec84fff67927 1002 Pfam PF05359 Domain of Unknown Function (DUF748) 414 560 4.1E-22 T 13-10-2018 IPR008023 Protein of unknown function DUF748 P40_13680 6432005ffe7a0283c739ec84fff67927 1002 Pfam PF05359 Domain of Unknown Function (DUF748) 616 758 2.5E-28 T 13-10-2018 IPR008023 Protein of unknown function DUF748 P40_13680 6432005ffe7a0283c739ec84fff67927 1002 Pfam PF05359 Domain of Unknown Function (DUF748) 203 353 1.4E-19 T 13-10-2018 IPR008023 Protein of unknown function DUF748 P40_12410 3a50b20c1d68b4061123ad61d07bf0af 452 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 21 414 3.6E-77 T 13-10-2018 IPR018683 Domain of unknown function DUF2169 P40_06860 eee23cba35e191a59bbd3a3d023e0fbd 460 PRINTS PR00175 Sodium/alanine symporter signature 197 215 1.3E-33 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_06860 eee23cba35e191a59bbd3a3d023e0fbd 460 PRINTS PR00175 Sodium/alanine symporter signature 95 117 1.3E-33 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_06860 eee23cba35e191a59bbd3a3d023e0fbd 460 PRINTS PR00175 Sodium/alanine symporter signature 361 383 1.3E-33 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_06860 eee23cba35e191a59bbd3a3d023e0fbd 460 PRINTS PR00175 Sodium/alanine symporter signature 316 334 1.3E-33 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_06860 eee23cba35e191a59bbd3a3d023e0fbd 460 PRINTS PR00175 Sodium/alanine symporter signature 225 244 1.3E-33 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_06860 eee23cba35e191a59bbd3a3d023e0fbd 460 PRINTS PR00175 Sodium/alanine symporter signature 420 440 1.3E-33 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_06860 eee23cba35e191a59bbd3a3d023e0fbd 460 Pfam PF01235 Sodium:alanine symporter family 60 456 1.2E-115 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_06860 eee23cba35e191a59bbd3a3d023e0fbd 460 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 95 110 - T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_06860 eee23cba35e191a59bbd3a3d023e0fbd 460 TIGRFAM TIGR00835 agcS: amino acid carrier protein 20 451 1.8E-114 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_20890 258064fbdc74840bec6aed441e00fbc6 162 PIRSF PIRSF019239 2 162 7.8E-43 T 13-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 P40_20890 258064fbdc74840bec6aed441e00fbc6 162 Pfam PF01899 Na+/H+ ion antiporter subunit 13 159 3.4E-43 T 13-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 P40_02750 478d2e6808e036c1e66ec7fd83fe2551 591 Pfam PF07661 MORN repeat variant 80 99 0.18 T 13-10-2018 IPR011652 MORN variant P40_02750 478d2e6808e036c1e66ec7fd83fe2551 591 SUPERFAMILY SSF82185 78 165 1.31E-6 T 13-10-2018 P40_02750 478d2e6808e036c1e66ec7fd83fe2551 591 Gene3D G3DSA:3.90.930.1 71 176 2.7E-10 T 13-10-2018 P40_02750 478d2e6808e036c1e66ec7fd83fe2551 591 SUPERFAMILY SSF82185 248 316 1.44E-5 T 13-10-2018 P40_00425 b6781d2919f65e96e8ea126180dc5abc 202 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 30.808 T 13-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 P40_00425 b6781d2919f65e96e8ea126180dc5abc 202 Gene3D G3DSA:3.40.50.360 1 200 6.5E-56 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_00425 b6781d2919f65e96e8ea126180dc5abc 202 Pfam PF02525 Flavodoxin-like fold 3 196 7.6E-43 T 13-10-2018 IPR003680 Flavodoxin-like fold P40_00425 b6781d2919f65e96e8ea126180dc5abc 202 SUPERFAMILY SSF52218 1 197 2.17E-53 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_16785 27101a5f3bf58fbea37e5041dad4db89 167 SUPERFAMILY SSF56784 13 162 1.49E-42 T 13-10-2018 IPR036412 HAD-like superfamily P40_16785 27101a5f3bf58fbea37e5041dad4db89 167 PIRSF PIRSF006118 5 167 2.2E-60 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 P40_16785 27101a5f3bf58fbea37e5041dad4db89 167 Pfam PF08282 haloacid dehalogenase-like hydrolase 87 147 1.1E-10 T 13-10-2018 P40_16785 27101a5f3bf58fbea37e5041dad4db89 167 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 13 163 1.2E-45 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 P40_16785 27101a5f3bf58fbea37e5041dad4db89 167 Gene3D G3DSA:3.40.50.1000 7 167 1.1E-54 T 13-10-2018 IPR023214 HAD superfamily P40_00060 abbfc590a089dcbddfd8ac9a89ead46a 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 276 9.8E-46 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_12220 9a8dd77319ccc80a34f416dece3fb3c1 570 SUPERFAMILY SSF110921 448 549 4.32E-27 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_12220 9a8dd77319ccc80a34f416dece3fb3c1 570 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 242 255 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_12220 9a8dd77319ccc80a34f416dece3fb3c1 570 Pfam PF00682 HMGL-like 33 310 8.2E-69 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 P40_12220 9a8dd77319ccc80a34f416dece3fb3c1 570 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 549 3.3E-18 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_12220 9a8dd77319ccc80a34f416dece3fb3c1 570 SMART SM00917 422 550 4.0E-20 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_12220 9a8dd77319ccc80a34f416dece3fb3c1 570 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 7 551 51.444 T 13-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_12220 9a8dd77319ccc80a34f416dece3fb3c1 570 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 6 550 1.4E-225 T 13-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 P40_12220 9a8dd77319ccc80a34f416dece3fb3c1 570 Gene3D G3DSA:3.30.160.270 378 549 5.5E-49 T 13-10-2018 P40_12220 9a8dd77319ccc80a34f416dece3fb3c1 570 SUPERFAMILY SSF51569 21 329 2.2E-94 T 13-10-2018 P40_12220 9a8dd77319ccc80a34f416dece3fb3c1 570 SUPERFAMILY SSF89000 389 437 2.0E-11 T 13-10-2018 P40_12220 9a8dd77319ccc80a34f416dece3fb3c1 570 Gene3D G3DSA:3.20.20.70 10 377 2.2E-147 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_11605 6ce547fd159e279ddc4f338038828b68 161 Gene3D G3DSA:3.10.129.10 3 156 2.7E-37 T 13-10-2018 P40_11605 6ce547fd159e279ddc4f338038828b68 161 SUPERFAMILY SSF54637 9 156 4.31E-35 T 13-10-2018 IPR029069 HotDog domain superfamily P40_11605 6ce547fd159e279ddc4f338038828b68 161 Pfam PF01575 MaoC like domain 20 130 9.1E-12 T 13-10-2018 IPR002539 MaoC-like dehydratase domain P40_20570 02b2d41efe08ea70788b97518c2808c4 210 Pfam PF01810 LysE type translocator 14 207 1.4E-32 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 P40_20570 02b2d41efe08ea70788b97518c2808c4 210 PIRSF PIRSF006324 1 209 2.3E-51 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 P40_21040 7cd3451af0dad28a5c961d3dbea93d23 205 SUPERFAMILY SSF47616 71 198 7.52E-24 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_21040 7cd3451af0dad28a5c961d3dbea93d23 205 Gene3D G3DSA:1.20.1050.10 84 199 1.8E-37 T 13-10-2018 P40_21040 7cd3451af0dad28a5c961d3dbea93d23 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 194 2.6E-5 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal P40_21040 7cd3451af0dad28a5c961d3dbea93d23 205 Gene3D G3DSA:3.40.30.10 1 82 9.7E-31 T 13-10-2018 P40_21040 7cd3451af0dad28a5c961d3dbea93d23 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 77 1.9E-14 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_21040 7cd3451af0dad28a5c961d3dbea93d23 205 SUPERFAMILY SSF52833 1 81 4.21E-20 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_01565 cd301ff283437982b0122d916a0cd47f 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 4.6E-19 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_01565 cd301ff283437982b0122d916a0cd47f 208 Gene3D G3DSA:3.40.30.10 1 87 9.4E-28 T 13-10-2018 P40_01565 cd301ff283437982b0122d916a0cd47f 208 Gene3D G3DSA:1.20.1050.10 88 198 1.6E-24 T 13-10-2018 P40_01565 cd301ff283437982b0122d916a0cd47f 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 193 6.8E-9 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal P40_01565 cd301ff283437982b0122d916a0cd47f 208 SUPERFAMILY SSF52833 1 84 1.68E-26 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_01565 cd301ff283437982b0122d916a0cd47f 208 SUPERFAMILY SSF47616 79 195 1.25E-25 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_18130 8cceefc2a0e02bba7f7f2c615366c3e7 335 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 28 225 2.7E-23 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18130 8cceefc2a0e02bba7f7f2c615366c3e7 335 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 154 1.6E-24 T 13-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18130 8cceefc2a0e02bba7f7f2c615366c3e7 335 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 327 9.0E-34 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18130 8cceefc2a0e02bba7f7f2c615366c3e7 335 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 243 306 3.6E-24 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18130 8cceefc2a0e02bba7f7f2c615366c3e7 335 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 23 314 4.8E-111 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18130 8cceefc2a0e02bba7f7f2c615366c3e7 335 Gene3D G3DSA:1.10.150.20 242 327 1.8E-37 T 13-10-2018 P40_18130 8cceefc2a0e02bba7f7f2c615366c3e7 335 SMART SM00662 22 232 7.1E-98 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18130 8cceefc2a0e02bba7f7f2c615366c3e7 335 Gene3D G3DSA:3.30.1360.10 18 225 4.0E-84 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18130 8cceefc2a0e02bba7f7f2c615366c3e7 335 SUPERFAMILY SSF47789 249 322 7.46E-26 T 13-10-2018 P40_18130 8cceefc2a0e02bba7f7f2c615366c3e7 335 Gene3D G3DSA:2.170.120.12 52 175 4.0E-84 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18130 8cceefc2a0e02bba7f7f2c615366c3e7 335 SUPERFAMILY SSF55257 5 231 2.51E-29 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18130 8cceefc2a0e02bba7f7f2c615366c3e7 335 SUPERFAMILY SSF56553 52 176 1.31E-42 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_18130 8cceefc2a0e02bba7f7f2c615366c3e7 335 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 4 315 35.688 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P40_06040 7120dba149d5ec5bd33fa418900ba7a8 413 Gene3D G3DSA:3.50.50.60 103 401 5.6E-41 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_06040 7120dba149d5ec5bd33fa418900ba7a8 413 SUPERFAMILY SSF51905 4 413 2.07E-45 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_06040 7120dba149d5ec5bd33fa418900ba7a8 413 Gene3D G3DSA:3.30.9.10 135 358 5.6E-41 T 13-10-2018 P40_06040 7120dba149d5ec5bd33fa418900ba7a8 413 Gene3D G3DSA:3.50.50.60 4 79 3.9E-14 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_06040 7120dba149d5ec5bd33fa418900ba7a8 413 SUPERFAMILY SSF54373 269 356 6.67E-8 T 13-10-2018 P40_06040 7120dba149d5ec5bd33fa418900ba7a8 413 Pfam PF01266 FAD dependent oxidoreductase 4 394 8.9E-59 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 P40_16740 9ee78b29d08911e9db8004bb7e200071 538 TIGRFAM TIGR02231 TIGR02231: conserved hypothetical protein 29 530 2.4E-57 T 13-10-2018 IPR011935 Conserved hypothetical protein CHP02231 P40_16740 9ee78b29d08911e9db8004bb7e200071 538 Pfam PF13598 Domain of unknown function (DUF4139) 215 525 1.9E-34 T 13-10-2018 IPR037291 Domain of unknown function DUF4139 P40_16740 9ee78b29d08911e9db8004bb7e200071 538 Pfam PF13600 N-terminal domain of unknown function (DUF4140) 32 125 1.1E-14 T 13-10-2018 IPR025554 Domain of unknown function DUF4140 P40_18945 34f5594aacd441f01be87caf39d1d71b 342 SUPERFAMILY SSF53850 42 267 8.15E-24 T 13-10-2018 P40_18945 34f5594aacd441f01be87caf39d1d71b 342 Gene3D G3DSA:3.40.190.10 45 314 4.5E-54 T 13-10-2018 P40_18945 34f5594aacd441f01be87caf39d1d71b 342 Gene3D G3DSA:3.40.190.10 124 221 4.5E-54 T 13-10-2018 P40_18945 34f5594aacd441f01be87caf39d1d71b 342 Pfam PF09084 NMT1/THI5 like 53 258 2.5E-32 T 13-10-2018 IPR015168 SsuA/THI5-like P40_14735 13e3e27617f33fa7d25f00ef9638a046 88 Pfam PF01527 Transposase 2 71 6.5E-24 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 P40_14735 13e3e27617f33fa7d25f00ef9638a046 88 Gene3D G3DSA:1.10.10.60 9 82 2.3E-6 T 13-10-2018 P40_14735 13e3e27617f33fa7d25f00ef9638a046 88 SUPERFAMILY SSF46689 1 73 8.96E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_08550 b5e7ad1ffeb2bacd27d250dc9569caac 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 3.3E-26 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_08550 b5e7ad1ffeb2bacd27d250dc9569caac 385 SUPERFAMILY SSF56645 3 241 7.85E-81 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_08550 b5e7ad1ffeb2bacd27d250dc9569caac 385 SUPERFAMILY SSF47203 229 381 6.44E-43 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_08550 b5e7ad1ffeb2bacd27d250dc9569caac 385 Gene3D G3DSA:1.10.540.10 1 120 4.7E-44 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_08550 b5e7ad1ffeb2bacd27d250dc9569caac 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 7.4E-40 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_08550 b5e7ad1ffeb2bacd27d250dc9569caac 385 Gene3D G3DSA:1.20.140.10 234 378 1.0E-39 T 13-10-2018 P40_08550 b5e7ad1ffeb2bacd27d250dc9569caac 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 3.7E-33 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_08550 b5e7ad1ffeb2bacd27d250dc9569caac 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_08550 b5e7ad1ffeb2bacd27d250dc9569caac 385 PIRSF PIRSF016578 125 362 3.7E-10 T 13-10-2018 P40_08550 b5e7ad1ffeb2bacd27d250dc9569caac 385 PIRSF PIRSF016578 1 82 0.1 T 13-10-2018 P40_08550 b5e7ad1ffeb2bacd27d250dc9569caac 385 Gene3D G3DSA:2.40.110.10 121 233 1.3E-43 T 13-10-2018 P40_05865 97d3a8f29f3b41589a9799ab55170d67 126 Gene3D G3DSA:3.40.50.1010 1 118 8.9E-18 T 13-10-2018 P40_05865 97d3a8f29f3b41589a9799ab55170d67 126 SUPERFAMILY SSF88723 1 120 4.21E-20 T 13-10-2018 IPR029060 PIN-like domain superfamily P40_05865 97d3a8f29f3b41589a9799ab55170d67 126 Pfam PF01850 PIN domain 3 114 4.3E-16 T 13-10-2018 IPR002716 PIN domain P40_08970 2717538dcd08b57b5279ecbe272547c9 128 Gene3D G3DSA:3.10.129.10 4 122 3.5E-27 T 13-10-2018 P40_08970 2717538dcd08b57b5279ecbe272547c9 128 PRINTS PR01483 Fatty acid synthase signature 16 38 3.0E-6 T 13-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 P40_08970 2717538dcd08b57b5279ecbe272547c9 128 PRINTS PR01483 Fatty acid synthase signature 38 59 3.0E-6 T 13-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 P40_08970 2717538dcd08b57b5279ecbe272547c9 128 SUPERFAMILY SSF54637 10 120 8.39E-24 T 13-10-2018 IPR029069 HotDog domain superfamily P40_08970 2717538dcd08b57b5279ecbe272547c9 128 Pfam PF01575 MaoC like domain 5 108 5.7E-23 T 13-10-2018 IPR002539 MaoC-like dehydratase domain P40_20175 f2d39a2472485929b678a066b38f6dbc 242 Pfam PF13649 Methyltransferase domain 57 151 9.4E-17 T 13-10-2018 P40_20175 f2d39a2472485929b678a066b38f6dbc 242 Gene3D G3DSA:3.40.50.150 19 233 3.8E-29 T 13-10-2018 P40_20175 f2d39a2472485929b678a066b38f6dbc 242 SUPERFAMILY SSF53335 13 231 3.65E-32 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_18760 660d9ddb320529b0e3474371627b9b7f 336 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 2 332 5.1E-89 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 P40_18760 660d9ddb320529b0e3474371627b9b7f 336 Pfam PF01628 HrcA protein C terminal domain 97 319 1.3E-57 T 13-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 P40_18760 660d9ddb320529b0e3474371627b9b7f 336 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 326 24.031 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 P40_18760 660d9ddb320529b0e3474371627b9b7f 336 SUPERFAMILY SSF55781 61 335 1.53E-57 T 13-10-2018 P40_18760 660d9ddb320529b0e3474371627b9b7f 336 Gene3D G3DSA:3.30.450.40 98 331 6.0E-40 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_18760 660d9ddb320529b0e3474371627b9b7f 336 SUPERFAMILY SSF46785 2 70 5.06E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_18760 660d9ddb320529b0e3474371627b9b7f 336 PIRSF PIRSF005485 1 336 2.0E-101 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 P40_18760 660d9ddb320529b0e3474371627b9b7f 336 Gene3D G3DSA:3.30.390.60 121 224 6.0E-40 T 13-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily P40_18760 660d9ddb320529b0e3474371627b9b7f 336 Gene3D G3DSA:1.10.10.10 1 74 1.2E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_20790 4496162e67e2c8215c15ffbe4ea68159 218 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 213 1.2E-64 T 13-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 P40_20790 4496162e67e2c8215c15ffbe4ea68159 218 Pfam PF03006 Haemolysin-III related 13 208 3.3E-41 T 13-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 P40_10535 ca70daef829dceec50ea417428107f47 183 Gene3D G3DSA:2.60.40.4150 29 160 6.4E-30 T 13-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily P40_10535 ca70daef829dceec50ea417428107f47 183 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 7 142 4.6E-25 T 13-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN P40_10535 ca70daef829dceec50ea417428107f47 183 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 16 149 6.2E-28 T 13-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN P40_16580 261e847998d3d5bf255e7cd5feb26a7b 345 Gene3D G3DSA:3.20.20.100 1 345 5.3E-129 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_16580 261e847998d3d5bf255e7cd5feb26a7b 345 Pfam PF00248 Aldo/keto reductase family 16 336 2.3E-68 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain P40_16580 261e847998d3d5bf255e7cd5feb26a7b 345 SUPERFAMILY SSF51430 1 344 6.94E-106 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_10375 d77d0ac1f639227dc3a5a46b1726a082 286 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 277 5.5E-41 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_11680 145b93dd08b83cbc310f827ec671bb60 257 Gene3D G3DSA:3.20.20.370 5 250 4.9E-11 T 13-10-2018 P40_11680 145b93dd08b83cbc310f827ec671bb60 257 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 13 167 7.4E-30 T 13-10-2018 IPR018763 Protein of unknown function DUF2334 P40_11680 145b93dd08b83cbc310f827ec671bb60 257 SUPERFAMILY SSF88713 12 173 1.22E-15 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 P40_20050 0c2d88fa834ce65783f980d65705bc60 473 SUPERFAMILY SSF53720 1 468 1.07E-166 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_20050 0c2d88fa834ce65783f980d65705bc60 473 Gene3D G3DSA:3.40.309.10 246 439 1.8E-175 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_20050 0c2d88fa834ce65783f980d65705bc60 473 Gene3D G3DSA:3.40.605.10 3 467 1.8E-175 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_20050 0c2d88fa834ce65783f980d65705bc60 473 Pfam PF00171 Aldehyde dehydrogenase family 7 467 1.7E-169 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_12695 b8360ac92f13986d55e89095c2101b09 222 SUPERFAMILY SSF48150 38 179 2.98E-35 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 P40_12695 b8360ac92f13986d55e89095c2101b09 222 Gene3D G3DSA:1.10.340.30 33 162 1.1E-19 T 13-10-2018 P40_12695 b8360ac92f13986d55e89095c2101b09 222 Pfam PF03352 Methyladenine glycosylase 37 132 1.7E-15 T 13-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 P40_02905 e2d5fb000ffe6a4e39ec48f62efb78a3 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 6.3E-52 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 P40_02905 e2d5fb000ffe6a4e39ec48f62efb78a3 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 3.2E-54 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 P40_02905 e2d5fb000ffe6a4e39ec48f62efb78a3 145 SUPERFAMILY SSF69500 2 144 1.7E-53 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily P40_02905 e2d5fb000ffe6a4e39ec48f62efb78a3 145 Gene3D G3DSA:3.50.80.10 1 145 1.8E-52 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily P40_02905 e2d5fb000ffe6a4e39ec48f62efb78a3 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.546 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 P40_00295 b7d96ae8bf1cfaf9ea85e54c21a1e89e 482 SUPERFAMILY SSF52540 15 380 2.4E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_00295 b7d96ae8bf1cfaf9ea85e54c21a1e89e 482 Gene3D G3DSA:3.40.50.300 192 379 1.2E-20 T 13-10-2018 P40_00295 b7d96ae8bf1cfaf9ea85e54c21a1e89e 482 Gene3D G3DSA:3.40.50.300 3 138 1.2E-8 T 13-10-2018 P40_00295 b7d96ae8bf1cfaf9ea85e54c21a1e89e 482 Pfam PF05872 Bacterial protein of unknown function (DUF853) 6 474 1.9E-201 T 13-10-2018 IPR033186 Helicase HerA-like C-terminal P40_04565 d0127d494344dee4efc56f8a64919f1c 346 Gene3D G3DSA:1.10.10.60 235 345 1.4E-25 T 13-10-2018 P40_04565 d0127d494344dee4efc56f8a64919f1c 346 Pfam PF12833 Helix-turn-helix domain 264 341 2.4E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_04565 d0127d494344dee4efc56f8a64919f1c 346 SMART SM00342 258 340 2.3E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_04565 d0127d494344dee4efc56f8a64919f1c 346 SUPERFAMILY SSF46689 293 343 8.6E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_04565 d0127d494344dee4efc56f8a64919f1c 346 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 27 214 8.4E-36 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_18460 cbeac40406f7c4dcf2743c160908937e 154 Pfam PF04073 Aminoacyl-tRNA editing domain 32 142 3.7E-23 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 P40_18460 cbeac40406f7c4dcf2743c160908937e 154 SUPERFAMILY SSF55826 2 152 1.83E-39 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 P40_18460 cbeac40406f7c4dcf2743c160908937e 154 PIRSF PIRSF006181 1 154 2.9E-47 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC P40_18460 cbeac40406f7c4dcf2743c160908937e 154 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 152 1.0E-50 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC P40_18460 cbeac40406f7c4dcf2743c160908937e 154 Gene3D G3DSA:3.90.960.10 1 154 1.6E-53 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 P40_09155 ec1efa6119ef95c22c9903eca240a75c 253 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 42.721 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_09155 ec1efa6119ef95c22c9903eca240a75c 253 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 P40_09155 ec1efa6119ef95c22c9903eca240a75c 253 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 3.6E-107 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_09155 ec1efa6119ef95c22c9903eca240a75c 253 Gene3D G3DSA:3.40.50.10490 8 219 5.0E-93 T 13-10-2018 P40_09155 ec1efa6119ef95c22c9903eca240a75c 253 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 P40_09155 ec1efa6119ef95c22c9903eca240a75c 253 Gene3D G3DSA:1.10.287.610 103 150 5.0E-93 T 13-10-2018 P40_09155 ec1efa6119ef95c22c9903eca240a75c 253 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.9E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_09155 ec1efa6119ef95c22c9903eca240a75c 253 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.9E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_09155 ec1efa6119ef95c22c9903eca240a75c 253 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.9E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_09155 ec1efa6119ef95c22c9903eca240a75c 253 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.9E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_09155 ec1efa6119ef95c22c9903eca240a75c 253 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.9E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_09155 ec1efa6119ef95c22c9903eca240a75c 253 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.9E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_09155 ec1efa6119ef95c22c9903eca240a75c 253 Pfam PF00318 Ribosomal protein S2 9 224 7.8E-96 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_09155 ec1efa6119ef95c22c9903eca240a75c 253 SUPERFAMILY SSF52313 6 228 1.83E-95 T 13-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily P40_19220 61b589691aaef97c4df4773778e10330 390 Gene3D G3DSA:1.20.1090.10 199 390 1.6E-51 T 13-10-2018 P40_19220 61b589691aaef97c4df4773778e10330 390 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 273 293 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 P40_19220 61b589691aaef97c4df4773778e10330 390 SUPERFAMILY SSF56796 7 389 9.81E-85 T 13-10-2018 P40_19220 61b589691aaef97c4df4773778e10330 390 Pfam PF00465 Iron-containing alcohol dehydrogenase 13 378 2.5E-80 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 P40_19220 61b589691aaef97c4df4773778e10330 390 Gene3D G3DSA:3.40.50.1970 4 197 1.1E-40 T 13-10-2018 P40_15665 f6e9396f5b9218bf7f347af58e7fab8d 887 Pfam PF00311 Phosphoenolpyruvate carboxylase 135 887 3.2E-276 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 P40_15665 f6e9396f5b9218bf7f347af58e7fab8d 887 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 2 887 18.71 T 13-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 P40_15665 f6e9396f5b9218bf7f347af58e7fab8d 887 SUPERFAMILY SSF51621 10 887 8.0E-302 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 P40_15665 f6e9396f5b9218bf7f347af58e7fab8d 887 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 544 556 - T 13-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 P40_15665 f6e9396f5b9218bf7f347af58e7fab8d 887 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 140 151 - T 13-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 P40_15665 f6e9396f5b9218bf7f347af58e7fab8d 887 Gene3D G3DSA:1.20.1440.90 306 392 1.3E-20 T 13-10-2018 P40_15665 f6e9396f5b9218bf7f347af58e7fab8d 887 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 251 266 2.8E-68 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 P40_15665 f6e9396f5b9218bf7f347af58e7fab8d 887 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 192 208 2.8E-68 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 P40_15665 f6e9396f5b9218bf7f347af58e7fab8d 887 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 584 613 2.8E-68 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 P40_15665 f6e9396f5b9218bf7f347af58e7fab8d 887 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 389 409 2.8E-68 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 P40_15665 f6e9396f5b9218bf7f347af58e7fab8d 887 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 139 152 2.8E-68 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 P40_15665 f6e9396f5b9218bf7f347af58e7fab8d 887 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 542 562 2.8E-68 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 P40_15665 f6e9396f5b9218bf7f347af58e7fab8d 887 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 716 742 2.8E-68 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 P40_16010 8e5dc079a66875e97df078cdd7f23549 311 ProSitePatterns PS00146 Beta-lactamase class-A active site. 73 88 - T 13-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 P40_16010 8e5dc079a66875e97df078cdd7f23549 311 PRINTS PR00118 Beta-lactamase class A signature 150 174 2.8E-42 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 P40_16010 8e5dc079a66875e97df078cdd7f23549 311 PRINTS PR00118 Beta-lactamase class A signature 40 64 2.8E-42 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 P40_16010 8e5dc079a66875e97df078cdd7f23549 311 PRINTS PR00118 Beta-lactamase class A signature 71 88 2.8E-42 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 P40_16010 8e5dc079a66875e97df078cdd7f23549 311 PRINTS PR00118 Beta-lactamase class A signature 114 139 2.8E-42 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 P40_16010 8e5dc079a66875e97df078cdd7f23549 311 PRINTS PR00118 Beta-lactamase class A signature 213 228 2.8E-42 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 P40_16010 8e5dc079a66875e97df078cdd7f23549 311 PRINTS PR00118 Beta-lactamase class A signature 230 245 2.8E-42 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 P40_16010 8e5dc079a66875e97df078cdd7f23549 311 Pfam PF13354 Beta-lactamase enzyme family 59 270 3.7E-40 T 13-10-2018 P40_16010 8e5dc079a66875e97df078cdd7f23549 311 SUPERFAMILY SSF56601 40 296 3.81E-69 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like P40_16010 8e5dc079a66875e97df078cdd7f23549 311 Gene3D G3DSA:3.40.710.10 36 298 8.5E-73 T 13-10-2018 P40_06000 da480fdeb4883c91ecdf06e469448f4c 272 SUPERFAMILY SSF56281 1 253 6.32E-17 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_06000 da480fdeb4883c91ecdf06e469448f4c 272 Gene3D G3DSA:3.60.15.10 1 255 3.3E-48 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_06000 da480fdeb4883c91ecdf06e469448f4c 272 Pfam PF13483 Beta-lactamase superfamily domain 3 210 4.0E-7 T 13-10-2018 P40_04785 a1fc9e642a2f291ae62f6aa5836dd53f 139 SUPERFAMILY SSF82784 1 137 7.72E-40 T 13-10-2018 IPR036102 OsmC/Ohr superfamily P40_04785 a1fc9e642a2f291ae62f6aa5836dd53f 139 Gene3D G3DSA:3.30.300.20 39 139 1.3E-29 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta P40_04785 a1fc9e642a2f291ae62f6aa5836dd53f 139 Gene3D G3DSA:2.20.25.10 1 33 3.1E-8 T 13-10-2018 P40_04785 a1fc9e642a2f291ae62f6aa5836dd53f 139 Pfam PF02566 OsmC-like protein 33 133 5.3E-18 T 13-10-2018 IPR003718 OsmC/Ohr family P40_15910 1d302a251c5c4f13368f6ac28fc5a793 385 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 3.7E-124 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 P40_15910 1d302a251c5c4f13368f6ac28fc5a793 385 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 1.8E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 P40_15910 1d302a251c5c4f13368f6ac28fc5a793 385 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 1.8E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 P40_15910 1d302a251c5c4f13368f6ac28fc5a793 385 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 1.8E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 P40_15910 1d302a251c5c4f13368f6ac28fc5a793 385 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 1.8E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 P40_15910 1d302a251c5c4f13368f6ac28fc5a793 385 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 1.8E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 P40_15910 1d302a251c5c4f13368f6ac28fc5a793 385 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 3.4E-122 T 13-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 P40_15910 1d302a251c5c4f13368f6ac28fc5a793 385 Gene3D G3DSA:3.40.1690.10 218 359 1.5E-56 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal P40_15910 1d302a251c5c4f13368f6ac28fc5a793 385 SUPERFAMILY SSF160544 252 354 3.66E-39 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal P40_11265 de3fb7e812c0de92bd32550344ac9723 136 Pfam PF06803 Protein of unknown function (DUF1232) 71 104 6.8E-10 T 13-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 P40_00160 9cf3824c1a5988124ebf4af899ef23fe 119 Gene3D G3DSA:3.30.720.110 65 118 5.3E-23 T 13-10-2018 P40_00160 9cf3824c1a5988124ebf4af899ef23fe 119 SUPERFAMILY SSF54593 4 116 1.48E-28 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_00160 9cf3824c1a5988124ebf4af899ef23fe 119 Gene3D G3DSA:3.30.720.120 2 48 2.0E-9 T 13-10-2018 P40_00160 9cf3824c1a5988124ebf4af899ef23fe 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 113 6.4E-15 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain P40_17195 74e36436966d6a7a876ba40cac04f36b 255 PIRSF PIRSF004808 1 255 3.4E-67 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 P40_17195 74e36436966d6a7a876ba40cac04f36b 255 Gene3D G3DSA:3.40.1280.10 1 165 1.0E-64 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal P40_17195 74e36436966d6a7a876ba40cac04f36b 255 Pfam PF00588 SpoU rRNA Methylase family 5 154 1.6E-30 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 P40_17195 74e36436966d6a7a876ba40cac04f36b 255 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 250 1.7E-71 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 P40_17195 74e36436966d6a7a876ba40cac04f36b 255 Gene3D G3DSA:1.10.8.590 186 249 3.0E-23 T 13-10-2018 P40_17195 74e36436966d6a7a876ba40cac04f36b 255 SUPERFAMILY SSF75217 4 158 6.47E-34 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases P40_08820 76ac15037755ce882398a2bee05bce09 266 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 11 236 5.8E-44 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 P40_08820 76ac15037755ce882398a2bee05bce09 266 SUPERFAMILY SSF51695 6 242 2.28E-65 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 P40_08820 76ac15037755ce882398a2bee05bce09 266 Gene3D G3DSA:3.20.20.190 2 244 1.6E-65 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 P40_00195 3aaf41cb757207cd6dc37b83b455216a 173 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 23 4.6E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal P40_03175 6ad2aead93a784f982b964f0a9dd9bfb 196 SUPERFAMILY SSF53474 6 188 5.46E-15 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_03175 6ad2aead93a784f982b964f0a9dd9bfb 196 Pfam PF05728 Uncharacterised protein family (UPF0227) 5 188 8.5E-47 T 13-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA P40_03175 6ad2aead93a784f982b964f0a9dd9bfb 196 Gene3D G3DSA:3.40.50.1820 3 193 7.4E-52 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_09000 c43e1f0a8d2b5bc3e5c5b8f862faa6d5 259 Pfam PF00005 ABC transporter 24 179 5.2E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_09000 c43e1f0a8d2b5bc3e5c5b8f862faa6d5 259 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_09000 c43e1f0a8d2b5bc3e5c5b8f862faa6d5 259 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 250 5.2E-5 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal P40_09000 c43e1f0a8d2b5bc3e5c5b8f862faa6d5 259 SUPERFAMILY SSF52540 7 249 2.56E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_09000 c43e1f0a8d2b5bc3e5c5b8f862faa6d5 259 Gene3D G3DSA:3.40.50.300 3 251 2.3E-57 T 13-10-2018 P40_09000 c43e1f0a8d2b5bc3e5c5b8f862faa6d5 259 SMART SM00382 32 228 3.1E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_15095 b19d7e3fa21805fc93597994561fa7ff 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 209 7.3E-42 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel P40_15095 b19d7e3fa21805fc93597994561fa7ff 228 TIGRFAM TIGR02796 tolQ: protein TolQ 8 221 2.5E-87 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 P40_15095 b19d7e3fa21805fc93597994561fa7ff 228 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 7 226 42.545 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 P40_02775 bb15c7cf43dfedbc67d9d1fe5f9e3002 197 Pfam PF12804 MobA-like NTP transferase domain 7 160 1.0E-29 T 13-10-2018 IPR025877 MobA-like NTP transferase P40_02775 bb15c7cf43dfedbc67d9d1fe5f9e3002 197 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 5 186 3.1E-48 T 13-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 P40_02775 bb15c7cf43dfedbc67d9d1fe5f9e3002 197 Gene3D G3DSA:3.90.550.10 1 192 9.0E-46 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_02775 bb15c7cf43dfedbc67d9d1fe5f9e3002 197 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 2 189 22.537 T 13-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 P40_02775 bb15c7cf43dfedbc67d9d1fe5f9e3002 197 SUPERFAMILY SSF53448 1 185 9.86E-24 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_06195 f46d994a9a61ba978ccef93ee4b125eb 261 Pfam PF02311 AraC-like ligand binding domain 18 92 5.8E-6 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 P40_06195 f46d994a9a61ba978ccef93ee4b125eb 261 Gene3D G3DSA:1.10.10.60 153 256 8.0E-20 T 13-10-2018 P40_06195 f46d994a9a61ba978ccef93ee4b125eb 261 SUPERFAMILY SSF46689 210 254 1.21E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06195 f46d994a9a61ba978ccef93ee4b125eb 261 SMART SM00342 170 252 3.6E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_06195 f46d994a9a61ba978ccef93ee4b125eb 261 Gene3D G3DSA:2.60.120.10 4 88 1.7E-8 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_06195 f46d994a9a61ba978ccef93ee4b125eb 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 221 236 4.8E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_06195 f46d994a9a61ba978ccef93ee4b125eb 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 252 4.8E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_06195 f46d994a9a61ba978ccef93ee4b125eb 261 Pfam PF12833 Helix-turn-helix domain 179 252 3.4E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_06195 f46d994a9a61ba978ccef93ee4b125eb 261 SUPERFAMILY SSF51182 10 184 1.33E-17 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_11615 08a8192ee44e92a39b72e46f878eccab 166 SUPERFAMILY SSF54637 19 162 1.59E-36 T 13-10-2018 IPR029069 HotDog domain superfamily P40_11615 08a8192ee44e92a39b72e46f878eccab 166 Gene3D G3DSA:3.10.129.10 13 166 3.8E-46 T 13-10-2018 P40_11615 08a8192ee44e92a39b72e46f878eccab 166 Pfam PF01575 MaoC like domain 26 129 1.3E-14 T 13-10-2018 IPR002539 MaoC-like dehydratase domain P40_12700 5ed720411f9191edb46524d3d2347e23 419 Gene3D G3DSA:3.40.640.10 67 308 4.3E-142 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_12700 5ed720411f9191edb46524d3d2347e23 419 Pfam PF00155 Aminotransferase class I and II 49 400 8.6E-53 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_12700 5ed720411f9191edb46524d3d2347e23 419 SUPERFAMILY SSF53383 21 415 6.32E-96 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_12700 5ed720411f9191edb46524d3d2347e23 419 Gene3D G3DSA:3.90.1150.10 35 412 4.3E-142 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_03325 27969b89021b4928dac1d2b85f2f96e8 315 Gene3D G3DSA:3.40.190.10 103 301 8.0E-41 T 13-10-2018 P40_03325 27969b89021b4928dac1d2b85f2f96e8 315 Gene3D G3DSA:3.40.190.10 174 274 8.0E-41 T 13-10-2018 P40_03325 27969b89021b4928dac1d2b85f2f96e8 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_03325 27969b89021b4928dac1d2b85f2f96e8 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_03325 27969b89021b4928dac1d2b85f2f96e8 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_03325 27969b89021b4928dac1d2b85f2f96e8 315 SUPERFAMILY SSF46785 2 86 3.38E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_03325 27969b89021b4928dac1d2b85f2f96e8 315 SUPERFAMILY SSF53850 92 305 1.25E-23 T 13-10-2018 P40_03325 27969b89021b4928dac1d2b85f2f96e8 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.0E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_03325 27969b89021b4928dac1d2b85f2f96e8 315 Pfam PF03466 LysR substrate binding domain 90 304 4.2E-19 T 13-10-2018 IPR005119 LysR, substrate-binding P40_03325 27969b89021b4928dac1d2b85f2f96e8 315 Gene3D G3DSA:1.10.10.10 6 93 5.3E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_06540 c63cedd0e4f0f2940fbe38bf74c7899b 177 SUPERFAMILY SSF51161 13 168 1.94E-48 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily P40_06540 c63cedd0e4f0f2940fbe38bf74c7899b 177 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 18 44 7.5E-5 T 13-10-2018 IPR001451 Hexapeptide repeat P40_06540 c63cedd0e4f0f2940fbe38bf74c7899b 177 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 121 1.3E-11 T 13-10-2018 IPR001451 Hexapeptide repeat P40_06540 c63cedd0e4f0f2940fbe38bf74c7899b 177 Gene3D G3DSA:2.160.10.10 1 173 3.7E-64 T 13-10-2018 P40_03910 bf005466f662b043303e86c40b5a9858 92 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 28 85 1.9E-17 T 13-10-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 P40_21380 bc7f1d9cd634f620c34ce95df7203143 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 89 457 3.0E-80 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain P40_21380 bc7f1d9cd634f620c34ce95df7203143 540 PIRSF PIRSF002741 9 528 3.5E-73 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 P40_21380 bc7f1d9cd634f620c34ce95df7203143 540 Gene3D G3DSA:3.40.190.10 20 298 1.8E-63 T 13-10-2018 P40_21380 bc7f1d9cd634f620c34ce95df7203143 540 SUPERFAMILY SSF53850 30 537 1.99E-106 T 13-10-2018 P40_21380 bc7f1d9cd634f620c34ce95df7203143 540 Gene3D G3DSA:3.10.105.10 299 511 1.1E-36 T 13-10-2018 P40_21335 13cc96b6bc3555c00cbcacfadeced394 504 Gene3D G3DSA:3.40.309.10 280 469 4.7E-193 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P40_21335 13cc96b6bc3555c00cbcacfadeced394 504 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 276 283 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 P40_21335 13cc96b6bc3555c00cbcacfadeced394 504 SUPERFAMILY SSF53720 18 502 8.77E-175 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P40_21335 13cc96b6bc3555c00cbcacfadeced394 504 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 304 315 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 P40_21335 13cc96b6bc3555c00cbcacfadeced394 504 Gene3D G3DSA:3.40.605.10 38 498 4.7E-193 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P40_21335 13cc96b6bc3555c00cbcacfadeced394 504 Pfam PF00171 Aldehyde dehydrogenase family 32 500 2.8E-179 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P40_20680 880bc9dbac5e59e83eaea0680b9504dd 198 SUPERFAMILY SSF55729 3 168 1.66E-13 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_20680 880bc9dbac5e59e83eaea0680b9504dd 198 Gene3D G3DSA:3.40.630.30 5 190 6.2E-10 T 13-10-2018 P40_20680 880bc9dbac5e59e83eaea0680b9504dd 198 Pfam PF00583 Acetyltransferase (GNAT) family 37 131 1.1E-6 T 13-10-2018 IPR000182 GNAT domain P40_19650 0bf27b17c0ecb5f1ec2c4fc701c32aab 297 Gene3D G3DSA:2.60.120.330 42 225 2.1E-40 T 13-10-2018 IPR027443 Isopenicillin N synthase-like P40_19650 0bf27b17c0ecb5f1ec2c4fc701c32aab 297 SUPERFAMILY SSF51197 97 219 2.39E-16 T 13-10-2018 P40_19650 0bf27b17c0ecb5f1ec2c4fc701c32aab 297 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 67 220 2.8E-45 T 13-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 P40_17780 92813d0a35818e8424ecdc579a744d27 380 Gene3D G3DSA:3.40.190.170 25 343 1.2E-62 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_17780 92813d0a35818e8424ecdc579a744d27 380 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 321 1.6E-23 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_07250 971f897cb90128c5d157b0072c2c8f70 218 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 13-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 P40_07250 971f897cb90128c5d157b0072c2c8f70 218 TIGRFAM TIGR01351 adk: adenylate kinase 2 187 4.9E-74 T 13-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 P40_07250 971f897cb90128c5d157b0072c2c8f70 218 Pfam PF00406 Adenylate kinase 5 184 2.3E-56 T 13-10-2018 P40_07250 971f897cb90128c5d157b0072c2c8f70 218 Hamap MF_00235 Adenylate kinase [adk]. 1 217 52.264 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 P40_07250 971f897cb90128c5d157b0072c2c8f70 218 PRINTS PR00094 Adenylate kinase signature 4 17 3.8E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 P40_07250 971f897cb90128c5d157b0072c2c8f70 218 PRINTS PR00094 Adenylate kinase signature 156 171 3.8E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 P40_07250 971f897cb90128c5d157b0072c2c8f70 218 PRINTS PR00094 Adenylate kinase signature 173 187 3.8E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 P40_07250 971f897cb90128c5d157b0072c2c8f70 218 PRINTS PR00094 Adenylate kinase signature 81 97 3.8E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 P40_07250 971f897cb90128c5d157b0072c2c8f70 218 PRINTS PR00094 Adenylate kinase signature 32 46 3.8E-35 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 P40_07250 971f897cb90128c5d157b0072c2c8f70 218 SUPERFAMILY SSF52540 1 215 2.02E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07250 971f897cb90128c5d157b0072c2c8f70 218 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.5E-17 T 13-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 P40_07250 971f897cb90128c5d157b0072c2c8f70 218 Gene3D G3DSA:3.40.50.300 1 218 9.3E-76 T 13-10-2018 P40_19005 9553052df7965b96dfcb7bfbda5e06f7 348 Gene3D G3DSA:2.102.10.10 9 134 2.3E-37 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_19005 9553052df7965b96dfcb7bfbda5e06f7 348 Pfam PF00355 Rieske [2Fe-2S] domain 13 92 3.9E-18 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 P40_19005 9553052df7965b96dfcb7bfbda5e06f7 348 Gene3D G3DSA:3.30.530.90 135 336 1.6E-10 T 13-10-2018 P40_19005 9553052df7965b96dfcb7bfbda5e06f7 348 SUPERFAMILY SSF55961 119 334 1.07E-28 T 13-10-2018 P40_19005 9553052df7965b96dfcb7bfbda5e06f7 348 SUPERFAMILY SSF50022 6 119 1.19E-34 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_07560 bb0ac35f8b477b1188be781b4e835965 407 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 2.5E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_07560 bb0ac35f8b477b1188be781b4e835965 407 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 2.5E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_07560 bb0ac35f8b477b1188be781b4e835965 407 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 2.5E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_07560 bb0ac35f8b477b1188be781b4e835965 407 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 2.5E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_07560 bb0ac35f8b477b1188be781b4e835965 407 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 339 354 2.5E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_07560 bb0ac35f8b477b1188be781b4e835965 407 SUPERFAMILY SSF53822 24 372 4.71E-74 T 13-10-2018 IPR028082 Periplasmic binding protein-like I P40_07560 bb0ac35f8b477b1188be781b4e835965 407 Gene3D G3DSA:3.40.50.2300 25 362 2.9E-147 T 13-10-2018 P40_07560 bb0ac35f8b477b1188be781b4e835965 407 Pfam PF13458 Periplasmic binding protein 25 372 2.6E-74 T 13-10-2018 IPR028081 Leucine-binding protein domain P40_07560 bb0ac35f8b477b1188be781b4e835965 407 Gene3D G3DSA:3.40.50.2300 152 401 2.9E-147 T 13-10-2018 P40_11950 decd8b690a5dffb3762b4705a0a1e6d8 492 SUPERFAMILY SSF52091 395 480 5.69E-12 T 13-10-2018 IPR036513 STAS domain superfamily P40_11950 decd8b690a5dffb3762b4705a0a1e6d8 492 Pfam PF01740 STAS domain 396 482 1.5E-8 T 13-10-2018 IPR002645 STAS domain P40_11950 decd8b690a5dffb3762b4705a0a1e6d8 492 Pfam PF00916 Sulfate permease family 14 143 3.3E-28 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 P40_11950 decd8b690a5dffb3762b4705a0a1e6d8 492 Pfam PF00916 Sulfate permease family 163 354 5.0E-30 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 P40_11950 decd8b690a5dffb3762b4705a0a1e6d8 492 Gene3D G3DSA:3.30.750.24 385 480 1.4E-27 T 13-10-2018 IPR036513 STAS domain superfamily P40_06225 b5f0095c860675e3932b79fd7f3958c3 151 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 28 148 5.0E-34 T 13-10-2018 P40_06225 b5f0095c860675e3932b79fd7f3958c3 151 TIGRFAM TIGR02695 azurin: azurin 26 149 4.4E-47 T 13-10-2018 IPR014068 Azurin P40_06225 b5f0095c860675e3932b79fd7f3958c3 151 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 128 144 - T 13-10-2018 IPR028871 Blue (type 1) copper protein, binding site P40_06225 b5f0095c860675e3932b79fd7f3958c3 151 Gene3D G3DSA:2.60.40.420 24 151 3.0E-39 T 13-10-2018 IPR008972 Cupredoxin P40_06225 b5f0095c860675e3932b79fd7f3958c3 151 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 26 151 2.8E-18 T 13-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 P40_06225 b5f0095c860675e3932b79fd7f3958c3 151 SUPERFAMILY SSF49503 25 150 1.07E-37 T 13-10-2018 IPR008972 Cupredoxin P40_14640 e63ea5579915519c51a659bdf1108ad1 1192 SUPERFAMILY SSF52540 65 346 8.36E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_04215 f0890ffbb53de6337cd834dc8839b2d9 438 Gene3D G3DSA:2.130.10.10 297 420 1.8E-7 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_04215 f0890ffbb53de6337cd834dc8839b2d9 438 SUPERFAMILY SSF50969 54 416 1.1E-13 T 13-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like P40_12860 257f40190477c2175375c4ebb6e08800 170 SUPERFAMILY SSF55961 3 168 3.41E-5 T 13-10-2018 P40_12860 257f40190477c2175375c4ebb6e08800 170 Pfam PF10698 Protein of unknown function (DUF2505) 5 166 1.2E-36 T 13-10-2018 IPR019639 Protein of unknown function DUF2505 P40_14360 f59400ddf0289d7d86e2ce3904b2038d 408 SUPERFAMILY SSF53633 4 241 7.2E-77 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily P40_14360 f59400ddf0289d7d86e2ce3904b2038d 408 Gene3D G3DSA:3.40.1160.10 1 253 1.0E-92 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily P40_14360 f59400ddf0289d7d86e2ce3904b2038d 408 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 1 402 4.7E-142 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 P40_14360 f59400ddf0289d7d86e2ce3904b2038d 408 PIRSF PIRSF000726 55 408 4.7E-149 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 P40_14360 f59400ddf0289d7d86e2ce3904b2038d 408 PIRSF PIRSF000726 1 60 1.5E-22 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 P40_14360 f59400ddf0289d7d86e2ce3904b2038d 408 SUPERFAMILY SSF55021 248 325 1.21E-18 T 13-10-2018 P40_14360 f59400ddf0289d7d86e2ce3904b2038d 408 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 403 7.6E-137 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 P40_14360 f59400ddf0289d7d86e2ce3904b2038d 408 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 P40_14360 f59400ddf0289d7d86e2ce3904b2038d 408 Pfam PF00696 Amino acid kinase family 3 229 1.3E-52 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 P40_14360 f59400ddf0289d7d86e2ce3904b2038d 408 Gene3D G3DSA:3.30.70.260 254 403 2.3E-59 T 13-10-2018 P40_14360 f59400ddf0289d7d86e2ce3904b2038d 408 Gene3D G3DSA:3.30.70.260 261 338 2.3E-59 T 13-10-2018 P40_14360 f59400ddf0289d7d86e2ce3904b2038d 408 SUPERFAMILY SSF55021 331 404 2.52E-25 T 13-10-2018 P40_14360 f59400ddf0289d7d86e2ce3904b2038d 408 Pfam PF01842 ACT domain 267 324 2.4E-9 T 13-10-2018 IPR002912 ACT domain P40_14360 f59400ddf0289d7d86e2ce3904b2038d 408 Pfam PF13840 ACT domain 337 399 1.7E-16 T 13-10-2018 IPR027795 CASTOR, ACT domain P40_20190 b07dbbdad35e1b1f5a8eec7d771f8338 582 SUPERFAMILY SSF56300 165 524 3.13E-33 T 13-10-2018 P40_20190 b07dbbdad35e1b1f5a8eec7d771f8338 582 Gene3D G3DSA:3.60.21.70 161 565 6.9E-130 T 13-10-2018 IPR038607 PhoD-like superfamily P40_20190 b07dbbdad35e1b1f5a8eec7d771f8338 582 Pfam PF09423 PhoD-like phosphatase 168 520 7.1E-115 T 13-10-2018 IPR018946 Alkaline phosphatase D-related P40_20190 b07dbbdad35e1b1f5a8eec7d771f8338 582 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 67 155 4.3E-31 T 13-10-2018 IPR032093 Phospholipase D, N-terminal P40_20190 b07dbbdad35e1b1f5a8eec7d771f8338 582 Gene3D G3DSA:2.60.40.380 59 158 4.4E-33 T 13-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 P40_12080 f94dcd9ccadcc8c094e08b6924cd7280 671 Pfam PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal 413 519 1.7E-22 T 13-10-2018 IPR031329 Neutral/alkaline non-lysosomal ceramidase, N-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119|Reactome: R-HSA-1660662 P40_12080 f94dcd9ccadcc8c094e08b6924cd7280 671 Pfam PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal 60 315 8.7E-27 T 13-10-2018 IPR031329 Neutral/alkaline non-lysosomal ceramidase, N-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119|Reactome: R-HSA-1660662 P40_09590 9823d35e233938a5e4cd6a08fac5e036 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 2.5E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09590 9823d35e233938a5e4cd6a08fac5e036 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.5E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09590 9823d35e233938a5e4cd6a08fac5e036 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 2.5E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09590 9823d35e233938a5e4cd6a08fac5e036 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.5E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09590 9823d35e233938a5e4cd6a08fac5e036 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.5E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09590 9823d35e233938a5e4cd6a08fac5e036 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.5E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09590 9823d35e233938a5e4cd6a08fac5e036 255 Gene3D G3DSA:3.40.50.720 1 255 8.7E-70 T 13-10-2018 P40_09590 9823d35e233938a5e4cd6a08fac5e036 255 SUPERFAMILY SSF51735 7 254 6.48E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_09590 9823d35e233938a5e4cd6a08fac5e036 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_09590 9823d35e233938a5e4cd6a08fac5e036 255 Pfam PF00106 short chain dehydrogenase 13 209 1.6E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09590 9823d35e233938a5e4cd6a08fac5e036 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.0E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09590 9823d35e233938a5e4cd6a08fac5e036 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.0E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09590 9823d35e233938a5e4cd6a08fac5e036 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.0E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_00360 ee4176d266eadce9b7c22106f47ba1dc 288 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 203 270 3.0E-9 T 13-10-2018 IPR006260 TonB/TolA, C-terminal P40_00360 ee4176d266eadce9b7c22106f47ba1dc 288 SUPERFAMILY SSF74653 175 282 2.75E-13 T 13-10-2018 P40_00360 ee4176d266eadce9b7c22106f47ba1dc 288 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 202 265 9.6E-11 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 P40_08400 f5295c463acbe4a5f30f7ae18fe6502e 1170 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1153 1.1E-65 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal P40_08400 f5295c463acbe4a5f30f7ae18fe6502e 1170 Gene3D G3DSA:3.40.50.300 933 1169 1.9E-45 T 13-10-2018 P40_08400 f5295c463acbe4a5f30f7ae18fe6502e 1170 Gene3D G3DSA:3.40.50.300 1 265 2.2E-55 T 13-10-2018 P40_08400 f5295c463acbe4a5f30f7ae18fe6502e 1170 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1161 0.0 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 P40_08400 f5295c463acbe4a5f30f7ae18fe6502e 1170 SUPERFAMILY SSF75553 484 671 7.45E-11 T 13-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 P40_08400 f5295c463acbe4a5f30f7ae18fe6502e 1170 SUPERFAMILY SSF52540 1 1146 8.82E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_08400 f5295c463acbe4a5f30f7ae18fe6502e 1170 SMART SM00968 520 622 9.6E-8 T 13-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 P40_08400 f5295c463acbe4a5f30f7ae18fe6502e 1170 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1163 23.427 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 P40_08400 f5295c463acbe4a5f30f7ae18fe6502e 1170 Pfam PF06470 SMC proteins Flexible Hinge Domain 523 621 1.4E-8 T 13-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 P40_08400 f5295c463acbe4a5f30f7ae18fe6502e 1170 PIRSF PIRSF005719 1 1170 2.0E-277 T 13-10-2018 IPR024704 Structural maintenance of chromosomes protein P40_18295 667fc3bcf4d63f54cd8d81180c0db35c 126 Gene3D G3DSA:1.20.5.710 2 55 8.7E-22 T 13-10-2018 P40_18295 667fc3bcf4d63f54cd8d81180c0db35c 126 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 126 25.717 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18295 667fc3bcf4d63f54cd8d81180c0db35c 126 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 61 126 2.0E-16 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18295 667fc3bcf4d63f54cd8d81180c0db35c 126 Gene3D G3DSA:3.30.1390.10 56 126 1.1E-32 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like P40_18295 667fc3bcf4d63f54cd8d81180c0db35c 126 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 126 8.5E-51 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18295 667fc3bcf4d63f54cd8d81180c0db35c 126 SUPERFAMILY SSF54736 55 126 2.09E-26 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like P40_18295 667fc3bcf4d63f54cd8d81180c0db35c 126 SUPERFAMILY SSF48300 4 62 9.94E-16 T 13-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18295 667fc3bcf4d63f54cd8d81180c0db35c 126 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 60 126 1.1E-32 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18295 667fc3bcf4d63f54cd8d81180c0db35c 126 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 3.5E-16 T 13-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_19480 246ae5dd45e4a1846e823fecde551e24 418 Pfam PF01554 MatE 22 179 1.7E-12 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_19480 246ae5dd45e4a1846e823fecde551e24 418 Pfam PF01554 MatE 246 407 1.6E-18 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_13545 2e7fef1bdff2227f0af9aa509bb84632 259 Gene3D G3DSA:3.40.30.10 29 134 4.1E-14 T 13-10-2018 P40_13545 2e7fef1bdff2227f0af9aa509bb84632 259 SUPERFAMILY SSF52833 33 114 6.73E-15 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_13545 2e7fef1bdff2227f0af9aa509bb84632 259 Pfam PF13417 Glutathione S-transferase, N-terminal domain 155 252 7.0E-8 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_13545 2e7fef1bdff2227f0af9aa509bb84632 259 Pfam PF13417 Glutathione S-transferase, N-terminal domain 36 113 3.6E-16 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_13545 2e7fef1bdff2227f0af9aa509bb84632 259 Gene3D G3DSA:3.40.30.10 148 258 1.9E-14 T 13-10-2018 P40_13545 2e7fef1bdff2227f0af9aa509bb84632 259 ProSitePatterns PS00195 Glutaredoxin active site. 36 52 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 P40_13545 2e7fef1bdff2227f0af9aa509bb84632 259 SUPERFAMILY SSF52833 152 253 6.73E-10 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_04195 473e41d24d8c6a3d8b803e6717f915d7 487 Gene3D G3DSA:1.20.1730.10 7 479 1.6E-61 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily P40_04195 473e41d24d8c6a3d8b803e6717f915d7 487 Pfam PF00474 Sodium:solute symporter family 31 417 9.2E-52 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 P40_06150 321429815485fb5493996cd3ff31fcd9 158 Pfam PF08592 Domain of unknown function (DUF1772) 18 153 3.7E-20 T 13-10-2018 P40_01555 53a91192592615c30ce9f5b942a272f5 132 Gene3D G3DSA:3.40.50.1010 1 130 1.6E-28 T 13-10-2018 P40_01555 53a91192592615c30ce9f5b942a272f5 132 SUPERFAMILY SSF88723 1 120 2.47E-17 T 13-10-2018 IPR029060 PIN-like domain superfamily P40_01555 53a91192592615c30ce9f5b942a272f5 132 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 127 10.231 T 13-10-2018 IPR022907 VapC family GO:0004540 P40_01555 53a91192592615c30ce9f5b942a272f5 132 Pfam PF01850 PIN domain 2 117 1.0E-10 T 13-10-2018 IPR002716 PIN domain P40_19395 416edc702a84bf3df8da4b10829d46bd 173 Gene3D G3DSA:3.60.20.10 1 173 1.6E-66 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P40_19395 416edc702a84bf3df8da4b10829d46bd 173 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 9.0E-87 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 P40_19395 416edc702a84bf3df8da4b10829d46bd 173 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.941 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 P40_19395 416edc702a84bf3df8da4b10829d46bd 173 Pfam PF00227 Proteasome subunit 2 167 4.6E-20 T 13-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 P40_19395 416edc702a84bf3df8da4b10829d46bd 173 PIRSF PIRSF039093 1 173 4.2E-87 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 P40_19395 416edc702a84bf3df8da4b10829d46bd 173 SUPERFAMILY SSF56235 2 172 2.44E-57 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P40_12000 a79e3ee78c03ce77c06ead2233eecd2c 416 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 144 241 2.0E-17 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_12000 a79e3ee78c03ce77c06ead2233eecd2c 416 Gene3D G3DSA:2.40.110.10 143 257 4.2E-44 T 13-10-2018 P40_12000 a79e3ee78c03ce77c06ead2233eecd2c 416 Gene3D G3DSA:1.10.540.10 7 142 1.8E-42 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_12000 a79e3ee78c03ce77c06ead2233eecd2c 416 Gene3D G3DSA:1.20.140.10 258 414 1.1E-34 T 13-10-2018 P40_12000 a79e3ee78c03ce77c06ead2233eecd2c 416 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 257 406 3.2E-33 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_12000 a79e3ee78c03ce77c06ead2233eecd2c 416 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 140 2.1E-14 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_12000 a79e3ee78c03ce77c06ead2233eecd2c 416 SUPERFAMILY SSF47203 255 410 6.93E-39 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_12000 a79e3ee78c03ce77c06ead2233eecd2c 416 SUPERFAMILY SSF56645 6 270 1.3E-67 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_13800 796785e862be001a7e61f3fbc1c3f3bb 128 SUPERFAMILY SSF47729 5 98 8.98E-28 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 P40_13800 796785e862be001a7e61f3fbc1c3f3bb 128 SMART SM00411 5 97 6.7E-37 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_13800 796785e862be001a7e61f3fbc1c3f3bb 128 Gene3D G3DSA:4.10.520.10 1 100 2.8E-30 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 P40_13800 796785e862be001a7e61f3fbc1c3f3bb 128 PRINTS PR01727 Prokaryotic integration host factor signature 65 78 2.1E-16 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_13800 796785e862be001a7e61f3fbc1c3f3bb 128 PRINTS PR01727 Prokaryotic integration host factor signature 81 95 2.1E-16 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_13800 796785e862be001a7e61f3fbc1c3f3bb 128 PRINTS PR01727 Prokaryotic integration host factor signature 47 62 2.1E-16 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_13800 796785e862be001a7e61f3fbc1c3f3bb 128 Pfam PF00216 Bacterial DNA-binding protein 5 97 8.0E-27 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P40_13800 796785e862be001a7e61f3fbc1c3f3bb 128 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 5 98 3.4E-40 T 13-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 P40_13800 796785e862be001a7e61f3fbc1c3f3bb 128 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 53 72 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 P40_08885 b6b441fefa3beee523792cbb993a5993 227 SMART SM00382 34 224 1.5E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_08885 b6b441fefa3beee523792cbb993a5993 227 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_08885 b6b441fefa3beee523792cbb993a5993 227 Gene3D G3DSA:3.40.50.300 3 224 3.8E-65 T 13-10-2018 P40_08885 b6b441fefa3beee523792cbb993a5993 227 SUPERFAMILY SSF52540 6 223 1.16E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_08885 b6b441fefa3beee523792cbb993a5993 227 Pfam PF00005 ABC transporter 25 173 1.8E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_06400 5fad9e5c2207f8cb3f283778890979e9 299 Gene3D G3DSA:3.40.50.300 18 258 2.2E-60 T 13-10-2018 P40_06400 5fad9e5c2207f8cb3f283778890979e9 299 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_06400 5fad9e5c2207f8cb3f283778890979e9 299 Pfam PF00005 ABC transporter 36 183 1.1E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_06400 5fad9e5c2207f8cb3f283778890979e9 299 SUPERFAMILY SSF52540 19 243 1.18E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_06400 5fad9e5c2207f8cb3f283778890979e9 299 SMART SM00382 45 247 1.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_00405 801145448a573dc4ecfc8f5a989e5477 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.5E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_00405 801145448a573dc4ecfc8f5a989e5477 220 SUPERFAMILY SSF52172 1 168 3.56E-37 T 13-10-2018 IPR011006 CheY-like superfamily P40_00405 801145448a573dc4ecfc8f5a989e5477 220 SMART SM00448 1 112 4.2E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_00405 801145448a573dc4ecfc8f5a989e5477 220 Pfam PF00072 Response regulator receiver domain 3 112 1.2E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_00405 801145448a573dc4ecfc8f5a989e5477 220 Gene3D G3DSA:3.40.50.2300 1 121 4.2E-39 T 13-10-2018 P40_00405 801145448a573dc4ecfc8f5a989e5477 220 SMART SM00862 145 216 1.8E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P40_00405 801145448a573dc4ecfc8f5a989e5477 220 Gene3D G3DSA:1.10.10.10 123 218 2.4E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14305 9c55c4a57c473ea748bef988bcbe4e4f 365 Pfam PF05940 NnrS protein 16 350 7.1E-40 T 13-10-2018 IPR010266 NnrS P40_21635 cd305ae80e4de0efe715c6d3c06c9765 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 13-10-2018 IPR019844 Cold-shock conserved site P40_21635 cd305ae80e4de0efe715c6d3c06c9765 67 SMART SM00357 3 67 1.9E-31 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 P40_21635 cd305ae80e4de0efe715c6d3c06c9765 67 PIRSF PIRSF002599 1 67 3.7E-26 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 P40_21635 cd305ae80e4de0efe715c6d3c06c9765 67 SUPERFAMILY SSF50249 1 65 6.43E-27 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_21635 cd305ae80e4de0efe715c6d3c06c9765 67 PRINTS PR00050 Cold shock protein signature 25 34 8.7E-19 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 P40_21635 cd305ae80e4de0efe715c6d3c06c9765 67 PRINTS PR00050 Cold shock protein signature 4 19 8.7E-19 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 P40_21635 cd305ae80e4de0efe715c6d3c06c9765 67 PRINTS PR00050 Cold shock protein signature 40 58 8.7E-19 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 P40_21635 cd305ae80e4de0efe715c6d3c06c9765 67 Gene3D G3DSA:2.40.50.140 1 66 1.3E-32 T 13-10-2018 P40_21635 cd305ae80e4de0efe715c6d3c06c9765 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.1E-33 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 P40_09675 eae0100c967d480608fac67f9d980251 392 Pfam PF02803 Thiolase, C-terminal domain 269 373 2.4E-6 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_09675 eae0100c967d480608fac67f9d980251 392 PIRSF PIRSF000429 10 384 1.6E-29 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_09675 eae0100c967d480608fac67f9d980251 392 Gene3D G3DSA:3.40.47.10 6 388 5.9E-116 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_09675 eae0100c967d480608fac67f9d980251 392 SUPERFAMILY SSF53901 25 233 3.51E-25 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_09675 eae0100c967d480608fac67f9d980251 392 SUPERFAMILY SSF53901 237 378 5.01E-28 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_14215 c25018cb83d80b55d24a3b6a7bf6fe21 295 Pfam PF01136 Peptidase family U32 93 246 1.9E-10 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 P40_01180 de565f4dbecb55051646cca7795626e5 322 Gene3D G3DSA:1.20.58.1130 9 205 9.2E-90 T 13-10-2018 P40_01180 de565f4dbecb55051646cca7795626e5 322 Pfam PF01699 Sodium/calcium exchanger protein 5 143 1.2E-22 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 P40_01180 de565f4dbecb55051646cca7795626e5 322 Pfam PF01699 Sodium/calcium exchanger protein 174 316 2.8E-31 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 P40_01180 de565f4dbecb55051646cca7795626e5 322 Gene3D G3DSA:1.20.1420.30 35 310 9.2E-90 T 13-10-2018 P40_01180 de565f4dbecb55051646cca7795626e5 322 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 1 312 1.7E-70 T 13-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 P40_00290 ca21ef082b4a438650c4e37484553505 181 SUPERFAMILY SSF54593 18 172 1.3E-34 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_00290 ca21ef082b4a438650c4e37484553505 181 Gene3D G3DSA:3.10.180.10 3 176 2.9E-66 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_00290 ca21ef082b4a438650c4e37484553505 181 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 25 169 1.4E-24 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain P40_00290 ca21ef082b4a438650c4e37484553505 181 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 13 179 1.9E-58 T 13-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 P40_00290 ca21ef082b4a438650c4e37484553505 181 ProSitePatterns PS00935 Glyoxalase I signature 2. 113 129 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 P40_00290 ca21ef082b4a438650c4e37484553505 181 ProSitePatterns PS00934 Glyoxalase I signature 1. 26 47 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 P40_20430 471aac8168b5a652830cde632d75b50e 195 Gene3D G3DSA:1.10.10.60 2 53 8.0E-10 T 13-10-2018 P40_20430 471aac8168b5a652830cde632d75b50e 195 SUPERFAMILY SSF46689 8 79 1.55E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_20430 471aac8168b5a652830cde632d75b50e 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.1E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_20430 471aac8168b5a652830cde632d75b50e 195 SUPERFAMILY SSF48498 86 189 3.42E-6 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_20430 471aac8168b5a652830cde632d75b50e 195 Gene3D G3DSA:1.10.357.10 54 194 1.2E-9 T 13-10-2018 P40_09955 4f6ceda5092c26510957cf6efb869522 279 Gene3D G3DSA:3.30.420.10 112 271 6.0E-8 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_09955 4f6ceda5092c26510957cf6efb869522 279 SUPERFAMILY SSF53098 109 275 2.12E-32 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_09955 4f6ceda5092c26510957cf6efb869522 279 Pfam PF00665 Integrase core domain 116 231 2.2E-24 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 P40_09955 4f6ceda5092c26510957cf6efb869522 279 Pfam PF13276 HTH-like domain 40 93 7.7E-18 T 13-10-2018 IPR025948 HTH-like domain P40_00480 c227133b6f581123ea9eb0f39459c673 150 Pfam PF02566 OsmC-like protein 49 147 5.1E-16 T 13-10-2018 IPR003718 OsmC/Ohr family P40_00480 c227133b6f581123ea9eb0f39459c673 150 Gene3D G3DSA:3.30.300.20 1 147 4.4E-44 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta P40_00480 c227133b6f581123ea9eb0f39459c673 150 SUPERFAMILY SSF82784 1 148 5.37E-39 T 13-10-2018 IPR036102 OsmC/Ohr superfamily P40_05660 834b5644a420a33bdb601088736d2fd0 186 Pfam PF01883 Iron-sulfur cluster assembly protein 88 162 1.7E-16 T 13-10-2018 IPR002744 MIP18 family-like P40_05660 834b5644a420a33bdb601088736d2fd0 186 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 13 185 6.7E-77 T 13-10-2018 IPR017776 FeS assembly SUF system protein SufT, putative P40_05660 834b5644a420a33bdb601088736d2fd0 186 SUPERFAMILY SSF117916 86 184 6.87E-28 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily P40_05660 834b5644a420a33bdb601088736d2fd0 186 Gene3D G3DSA:3.30.300.130 82 185 2.6E-33 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily P40_07460 4d7a32e7eb943a73522d72570c771479 275 Pfam PF00665 Integrase core domain 109 225 5.4E-26 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 P40_07460 4d7a32e7eb943a73522d72570c771479 275 Gene3D G3DSA:3.30.420.10 106 247 6.5E-12 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_07460 4d7a32e7eb943a73522d72570c771479 275 SUPERFAMILY SSF53098 102 268 4.55E-35 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_11280 174c3399314c0cb18af07b45795498c2 459 Gene3D G3DSA:3.30.390.30 338 457 3.4E-46 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P40_11280 174c3399314c0cb18af07b45795498c2 459 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 P40_11280 174c3399314c0cb18af07b45795498c2 459 Gene3D G3DSA:3.50.50.60 144 260 9.0E-107 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_11280 174c3399314c0cb18af07b45795498c2 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 317 3.6E-68 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_11280 174c3399314c0cb18af07b45795498c2 459 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 447 2.4E-34 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 P40_11280 174c3399314c0cb18af07b45795498c2 459 SUPERFAMILY SSF55424 336 448 2.92E-34 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P40_11280 174c3399314c0cb18af07b45795498c2 459 SUPERFAMILY SSF51905 5 373 2.33E-60 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_11280 174c3399314c0cb18af07b45795498c2 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 3.1E-31 T 13-10-2018 P40_11280 174c3399314c0cb18af07b45795498c2 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 3.1E-31 T 13-10-2018 P40_11280 174c3399314c0cb18af07b45795498c2 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 3.1E-31 T 13-10-2018 P40_11280 174c3399314c0cb18af07b45795498c2 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 3.1E-31 T 13-10-2018 P40_11280 174c3399314c0cb18af07b45795498c2 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.1E-31 T 13-10-2018 P40_11280 174c3399314c0cb18af07b45795498c2 459 PIRSF PIRSF000350 1 438 9.1E-76 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 P40_11280 174c3399314c0cb18af07b45795498c2 459 Gene3D G3DSA:3.50.50.60 5 317 9.0E-107 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_11280 174c3399314c0cb18af07b45795498c2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.3E-64 T 13-10-2018 P40_11280 174c3399314c0cb18af07b45795498c2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 1.3E-64 T 13-10-2018 P40_11280 174c3399314c0cb18af07b45795498c2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 422 442 1.3E-64 T 13-10-2018 P40_11280 174c3399314c0cb18af07b45795498c2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.3E-64 T 13-10-2018 P40_11280 174c3399314c0cb18af07b45795498c2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.3E-64 T 13-10-2018 P40_11280 174c3399314c0cb18af07b45795498c2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 415 1.3E-64 T 13-10-2018 P40_11280 174c3399314c0cb18af07b45795498c2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 1.3E-64 T 13-10-2018 P40_11280 174c3399314c0cb18af07b45795498c2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.3E-64 T 13-10-2018 P40_11280 174c3399314c0cb18af07b45795498c2 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 1.3E-64 T 13-10-2018 P40_02645 68e743be05705745d8548fae10de9199 203 Gene3D G3DSA:1.10.357.10 12 201 2.0E-21 T 13-10-2018 P40_02645 68e743be05705745d8548fae10de9199 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.2E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_02645 68e743be05705745d8548fae10de9199 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.2E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_02645 68e743be05705745d8548fae10de9199 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 8.1E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_02645 68e743be05705745d8548fae10de9199 203 SUPERFAMILY SSF46689 2 79 7.48E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_02645 68e743be05705745d8548fae10de9199 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site P40_00495 b3be5731514adcb4302750128c898968 223 SUPERFAMILY SSF53254 1 219 6.42E-34 T 13-10-2018 IPR029033 Histidine phosphatase superfamily P40_00495 b3be5731514adcb4302750128c898968 223 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 206 3.6E-21 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_00495 b3be5731514adcb4302750128c898968 223 Gene3D G3DSA:3.40.50.1240 1 217 3.0E-30 T 13-10-2018 IPR029033 Histidine phosphatase superfamily P40_00495 b3be5731514adcb4302750128c898968 223 SMART SM00855 3 166 6.6E-8 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_00765 96a4fd63ee881b44e38d3b68527fd52e 275 Gene3D G3DSA:3.40.50.720 1 274 2.9E-70 T 13-10-2018 P40_00765 96a4fd63ee881b44e38d3b68527fd52e 275 SUPERFAMILY SSF51735 3 268 3.95E-23 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_19920 166c03e4f18fe93ea9d01f0798cc0bb5 201 Pfam PF06821 Serine hydrolase 6 177 5.9E-59 T 13-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 P40_19920 166c03e4f18fe93ea9d01f0798cc0bb5 201 Gene3D G3DSA:3.40.50.1820 2 184 1.4E-50 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_19920 166c03e4f18fe93ea9d01f0798cc0bb5 201 SUPERFAMILY SSF53474 6 176 1.97E-34 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_07915 a633168bc20e4be9ae68a84572be7d77 278 Pfam PF09339 IclR helix-turn-helix domain 28 78 2.3E-13 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 P40_07915 a633168bc20e4be9ae68a84572be7d77 278 Gene3D G3DSA:1.10.10.10 20 93 3.6E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_07915 a633168bc20e4be9ae68a84572be7d77 278 Pfam PF01614 Bacterial transcriptional regulator 147 263 2.0E-6 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal P40_07915 a633168bc20e4be9ae68a84572be7d77 278 SUPERFAMILY SSF46785 26 95 1.65E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_07915 a633168bc20e4be9ae68a84572be7d77 278 SMART SM00346 26 115 6.6E-12 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 P40_07915 a633168bc20e4be9ae68a84572be7d77 278 SUPERFAMILY SSF55781 84 267 9.81E-22 T 13-10-2018 P40_07915 a633168bc20e4be9ae68a84572be7d77 278 Gene3D G3DSA:3.30.450.40 102 264 1.2E-19 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_04140 586c1418cdf0e70ccba65eb61737a5b2 85 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 9 84 7.2E-36 T 13-10-2018 IPR019886 Sodium symporter small subunit, predicted P40_04140 586c1418cdf0e70ccba65eb61737a5b2 85 Pfam PF13937 Domain of unknown function (DUF4212) 7 83 4.3E-34 T 13-10-2018 IPR019886 Sodium symporter small subunit, predicted P40_04545 832932f71b21ec9224df09d9e9afb93e 310 Pfam PF05661 Protein of unknown function (DUF808) 4 294 7.5E-113 T 13-10-2018 IPR008526 Inner membrane protein YedI P40_04545 832932f71b21ec9224df09d9e9afb93e 310 PIRSF PIRSF016660 1 306 2.1E-117 T 13-10-2018 IPR008526 Inner membrane protein YedI P40_15700 9860c32a9622637a01bdc01accf045c4 256 Pfam PF00106 short chain dehydrogenase 6 204 3.0E-47 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15700 9860c32a9622637a01bdc01accf045c4 256 Gene3D G3DSA:3.40.50.720 1 255 1.5E-78 T 13-10-2018 P40_15700 9860c32a9622637a01bdc01accf045c4 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 0.006 T 13-10-2018 P40_15700 9860c32a9622637a01bdc01accf045c4 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.3E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15700 9860c32a9622637a01bdc01accf045c4 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 2.3E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15700 9860c32a9622637a01bdc01accf045c4 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.3E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15700 9860c32a9622637a01bdc01accf045c4 256 SUPERFAMILY SSF51735 2 253 1.14E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_15700 9860c32a9622637a01bdc01accf045c4 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_15700 9860c32a9622637a01bdc01accf045c4 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 4.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15700 9860c32a9622637a01bdc01accf045c4 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 4.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15700 9860c32a9622637a01bdc01accf045c4 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15700 9860c32a9622637a01bdc01accf045c4 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 4.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15700 9860c32a9622637a01bdc01accf045c4 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15700 9860c32a9622637a01bdc01accf045c4 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09095 374fa65b5ce7adfd4dd34a5b1ed90102 271 Pfam PF02673 Bacitracin resistance protein BacA 6 258 7.8E-81 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 P40_09095 374fa65b5ce7adfd4dd34a5b1ed90102 271 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 4.2E-75 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 P40_09095 374fa65b5ce7adfd4dd34a5b1ed90102 271 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.38 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 P40_11490 dcd7cb2e011811c9f83b444756590afc 111 SUPERFAMILY SSF160113 60 109 8.9E-17 T 13-10-2018 IPR036913 YegP-like superfamily P40_11490 dcd7cb2e011811c9f83b444756590afc 111 Pfam PF07411 Domain of unknown function (DUF1508) 61 108 5.2E-21 T 13-10-2018 IPR010879 Domain of unknown function DUF1508 P40_11490 dcd7cb2e011811c9f83b444756590afc 111 Pfam PF07411 Domain of unknown function (DUF1508) 10 56 5.2E-22 T 13-10-2018 IPR010879 Domain of unknown function DUF1508 P40_11490 dcd7cb2e011811c9f83b444756590afc 111 SUPERFAMILY SSF160113 1 56 8.5E-19 T 13-10-2018 IPR036913 YegP-like superfamily P40_11490 dcd7cb2e011811c9f83b444756590afc 111 Gene3D G3DSA:2.30.29.80 1 111 2.9E-48 T 13-10-2018 P40_03365 15209baee39cbedfc711fd5a8dfbe9d7 394 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 373 4.2E-85 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 P40_03365 15209baee39cbedfc711fd5a8dfbe9d7 394 Gene3D G3DSA:2.40.50.100 71 214 2.2E-101 T 13-10-2018 P40_03365 15209baee39cbedfc711fd5a8dfbe9d7 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 293 3.2E-18 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain P40_03365 15209baee39cbedfc711fd5a8dfbe9d7 394 Gene3D G3DSA:2.40.30.170 57 303 2.2E-101 T 13-10-2018 P40_03365 15209baee39cbedfc711fd5a8dfbe9d7 394 SUPERFAMILY SSF111369 59 298 2.48E-70 T 13-10-2018 P40_03365 15209baee39cbedfc711fd5a8dfbe9d7 394 Gene3D G3DSA:1.10.287.470 106 179 2.2E-101 T 13-10-2018 P40_03365 15209baee39cbedfc711fd5a8dfbe9d7 394 Gene3D G3DSA:2.40.420.20 304 372 2.2E-101 T 13-10-2018 P40_16065 d7cd73d5a656c375a6fd6373ff47d083 343 SUPERFAMILY SSF103039 7 229 8.11E-20 T 13-10-2018 IPR028976 CheC-like superfamily P40_16065 d7cd73d5a656c375a6fd6373ff47d083 343 SUPERFAMILY SSF101801 247 321 5.49E-12 T 13-10-2018 IPR036429 SpoA-like superfamily P40_16065 d7cd73d5a656c375a6fd6373ff47d083 343 Pfam PF02154 Flagellar motor switch protein FliM 36 229 1.6E-69 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 P40_16065 d7cd73d5a656c375a6fd6373ff47d083 343 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 318 3.7E-99 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 P40_16065 d7cd73d5a656c375a6fd6373ff47d083 343 Gene3D G3DSA:3.40.1550.10 42 231 1.7E-55 T 13-10-2018 IPR028976 CheC-like superfamily P40_16065 d7cd73d5a656c375a6fd6373ff47d083 343 PIRSF PIRSF002888 3 327 3.1E-90 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 P40_16065 d7cd73d5a656c375a6fd6373ff47d083 343 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 7.8E-16 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) P40_16065 d7cd73d5a656c375a6fd6373ff47d083 343 PRINTS PR00955 Flagellar motor switch protein FliM signature 112 131 4.2E-26 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 P40_16065 d7cd73d5a656c375a6fd6373ff47d083 343 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 4.2E-26 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 P40_16065 d7cd73d5a656c375a6fd6373ff47d083 343 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 4.2E-26 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 P40_16065 d7cd73d5a656c375a6fd6373ff47d083 343 PRINTS PR00955 Flagellar motor switch protein FliM signature 87 103 4.2E-26 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 P40_03270 2856b729acfe9704dcce531cbcdaca35 218 Pfam PF00043 Glutathione S-transferase, C-terminal domain 139 194 2.4E-4 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal P40_03270 2856b729acfe9704dcce531cbcdaca35 218 SUPERFAMILY SSF52833 1 79 1.79E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_03270 2856b729acfe9704dcce531cbcdaca35 218 Gene3D G3DSA:3.40.30.10 1 82 4.6E-21 T 13-10-2018 P40_03270 2856b729acfe9704dcce531cbcdaca35 218 SUPERFAMILY SSF47616 84 201 3.9E-18 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_03270 2856b729acfe9704dcce531cbcdaca35 218 Gene3D G3DSA:1.20.1050.10 84 201 1.1E-16 T 13-10-2018 P40_03270 2856b729acfe9704dcce531cbcdaca35 218 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 72 1.4E-11 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_07665 b550f1888a028e3586c60153b8e2cc75 305 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 179 199 2.1E-8 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) P40_07665 b550f1888a028e3586c60153b8e2cc75 305 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 223 240 2.1E-8 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) P40_07665 b550f1888a028e3586c60153b8e2cc75 305 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 265 283 2.1E-8 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) P40_07665 b550f1888a028e3586c60153b8e2cc75 305 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 156 178 2.1E-8 T 13-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) P40_07665 b550f1888a028e3586c60153b8e2cc75 305 Gene3D G3DSA:2.120.10.30 1 302 1.2E-63 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_07665 b550f1888a028e3586c60153b8e2cc75 305 SUPERFAMILY SSF63829 5 299 5.45E-59 T 13-10-2018 P40_07665 b550f1888a028e3586c60153b8e2cc75 305 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 13 283 1.3E-54 T 13-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region P40_06155 6e2f8458844d1f2e3b4c0aa02b2ddb1f 125 Gene3D G3DSA:2.170.150.40 10 119 6.3E-36 T 13-10-2018 P40_06155 6e2f8458844d1f2e3b4c0aa02b2ddb1f 125 Pfam PF04248 Domain of unknown function (DUF427) 25 114 9.8E-31 T 13-10-2018 IPR007361 Domain of unknown function DUF427 P40_00265 ac81974f73fd4b4544335a31f86e2436 108 Gene3D G3DSA:1.10.10.10 9 108 7.4E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_00265 ac81974f73fd4b4544335a31f86e2436 108 Pfam PF01022 Bacterial regulatory protein, arsR family 29 74 6.7E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_00265 ac81974f73fd4b4544335a31f86e2436 108 SMART SM00418 22 100 2.7E-28 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_00265 ac81974f73fd4b4544335a31f86e2436 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 5.3E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_00265 ac81974f73fd4b4544335a31f86e2436 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 5.3E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_00265 ac81974f73fd4b4544335a31f86e2436 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 5.3E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 P40_00265 ac81974f73fd4b4544335a31f86e2436 108 SUPERFAMILY SSF46785 18 103 9.11E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_12680 90b50b4ba998b3f5b8bbbcdeaa3b1198 277 Gene3D G3DSA:1.10.287.110 205 275 1.3E-16 T 13-10-2018 IPR036869 Chaperone J-domain superfamily P40_12680 90b50b4ba998b3f5b8bbbcdeaa3b1198 277 Gene3D G3DSA:1.10.3680.10 46 191 9.9E-29 T 13-10-2018 IPR029024 TerB-like P40_12680 90b50b4ba998b3f5b8bbbcdeaa3b1198 277 SMART SM00271 211 276 2.7E-19 T 13-10-2018 IPR001623 DnaJ domain P40_12680 90b50b4ba998b3f5b8bbbcdeaa3b1198 277 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 4 277 35.463 T 13-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 P40_12680 90b50b4ba998b3f5b8bbbcdeaa3b1198 277 SUPERFAMILY SSF158682 22 226 4.45E-29 T 13-10-2018 IPR029024 TerB-like P40_12680 90b50b4ba998b3f5b8bbbcdeaa3b1198 277 PRINTS PR00625 DnaJ domain signature 256 276 2.3E-11 T 13-10-2018 IPR001623 DnaJ domain P40_12680 90b50b4ba998b3f5b8bbbcdeaa3b1198 277 PRINTS PR00625 DnaJ domain signature 232 247 2.3E-11 T 13-10-2018 IPR001623 DnaJ domain P40_12680 90b50b4ba998b3f5b8bbbcdeaa3b1198 277 PRINTS PR00625 DnaJ domain signature 214 232 2.3E-11 T 13-10-2018 IPR001623 DnaJ domain P40_12680 90b50b4ba998b3f5b8bbbcdeaa3b1198 277 Pfam PF00226 DnaJ domain 213 273 7.6E-14 T 13-10-2018 IPR001623 DnaJ domain P40_12680 90b50b4ba998b3f5b8bbbcdeaa3b1198 277 Pfam PF05099 Tellurite resistance protein TerB 56 178 2.5E-21 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal P40_12680 90b50b4ba998b3f5b8bbbcdeaa3b1198 277 SUPERFAMILY SSF46565 210 272 6.13E-18 T 13-10-2018 IPR036869 Chaperone J-domain superfamily P40_09105 9a6a53bd1b1d45adbe7bc1de8b230298 816 Pfam PF01553 Acyltransferase 272 410 1.4E-22 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_09105 9a6a53bd1b1d45adbe7bc1de8b230298 816 PIRSF PIRSF500064 1 810 1.1E-253 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 P40_09105 9a6a53bd1b1d45adbe7bc1de8b230298 816 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 5 799 25.103 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 P40_09105 9a6a53bd1b1d45adbe7bc1de8b230298 816 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 2 795 0.0 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 P40_09105 9a6a53bd1b1d45adbe7bc1de8b230298 816 SUPERFAMILY SSF69593 244 512 3.66E-30 T 13-10-2018 P40_09105 9a6a53bd1b1d45adbe7bc1de8b230298 816 SMART SM00563 287 414 2.4E-24 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_09105 9a6a53bd1b1d45adbe7bc1de8b230298 816 PIRSF PIRSF000437 4 809 2.6E-246 T 13-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 P40_05060 a8432aa86b7c48d625618adb409e3964 166 Gene3D G3DSA:1.10.10.10 1 164 2.4E-40 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_05060 a8432aa86b7c48d625618adb409e3964 166 Pfam PF12802 MarR family 49 111 2.5E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_05060 a8432aa86b7c48d625618adb409e3964 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 1.1E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_05060 a8432aa86b7c48d625618adb409e3964 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 1.1E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_05060 a8432aa86b7c48d625618adb409e3964 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 1.1E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_05060 a8432aa86b7c48d625618adb409e3964 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 1.1E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_05060 a8432aa86b7c48d625618adb409e3964 166 SMART SM00347 44 147 2.6E-25 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_05060 a8432aa86b7c48d625618adb409e3964 166 SUPERFAMILY SSF46785 11 162 1.32E-35 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_12745 d815b37fe834352df8d50d33734bf3fc 403 Gene3D G3DSA:3.40.640.10 8 259 2.6E-87 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_12745 d815b37fe834352df8d50d33734bf3fc 403 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 14 399 53.005 T 13-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 P40_12745 d815b37fe834352df8d50d33734bf3fc 403 PIRSF PIRSF001434 1 402 3.2E-128 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 P40_12745 d815b37fe834352df8d50d33734bf3fc 403 SUPERFAMILY SSF53383 32 399 7.31E-114 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_12745 d815b37fe834352df8d50d33734bf3fc 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 204 218 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 P40_12745 d815b37fe834352df8d50d33734bf3fc 403 Gene3D G3DSA:3.90.1150.10 262 402 3.2E-46 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_12745 d815b37fe834352df8d50d33734bf3fc 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 398 4.6E-134 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 P40_12745 d815b37fe834352df8d50d33734bf3fc 403 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 13 397 5.2E-171 T 13-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 P40_14850 5a471ce724f22e59e3f7d73a945666e0 111 Gene3D G3DSA:1.10.260.40 2 66 1.2E-17 T 13-10-2018 P40_14850 5a471ce724f22e59e3f7d73a945666e0 111 SMART SM00530 7 62 3.5E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_14850 5a471ce724f22e59e3f7d73a945666e0 111 SUPERFAMILY SSF47413 4 68 5.16E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_14850 5a471ce724f22e59e3f7d73a945666e0 111 Pfam PF01381 Helix-turn-helix 8 62 1.9E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_09260 2ac79b850f4a829ccdd8338af32a8990 104 Pfam PF04977 Septum formation initiator 17 95 6.0E-22 T 13-10-2018 IPR007060 Septum formation initiator FtsL/DivIC P40_09260 2ac79b850f4a829ccdd8338af32a8990 104 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 96 29.001 T 13-10-2018 IPR023081 Cell division protein FtsB P40_03630 f010a4efa9c762fe238d2921e99cf8d8 340 Gene3D G3DSA:1.10.20.140 121 192 4.1E-94 T 13-10-2018 P40_03630 f010a4efa9c762fe238d2921e99cf8d8 340 SUPERFAMILY SSF52540 10 245 7.48E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03630 f010a4efa9c762fe238d2921e99cf8d8 340 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 14 321 29.245 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 P40_03630 f010a4efa9c762fe238d2921e99cf8d8 340 Gene3D G3DSA:3.40.50.300 18 310 4.1E-94 T 13-10-2018 P40_03630 f010a4efa9c762fe238d2921e99cf8d8 340 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 14 313 1.7E-95 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 P40_03630 f010a4efa9c762fe238d2921e99cf8d8 340 SUPERFAMILY SSF52540 15 155 3.13E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03630 f010a4efa9c762fe238d2921e99cf8d8 340 Pfam PF01715 IPP transferase 48 304 3.4E-81 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 P40_04120 8d6d076c23aa3a97f91a1a9d819aa7cb 836 Pfam PF13953 PapC C-terminal domain 752 817 1.2E-24 T 13-10-2018 IPR025949 PapC-like, C-terminal domain P40_04120 8d6d076c23aa3a97f91a1a9d819aa7cb 836 Gene3D G3DSA:2.60.40.3110 264 353 3.7E-39 T 13-10-2018 P40_04120 8d6d076c23aa3a97f91a1a9d819aa7cb 836 Gene3D G3DSA:3.10.20.410 31 153 2.4E-32 T 13-10-2018 P40_04120 8d6d076c23aa3a97f91a1a9d819aa7cb 836 Pfam PF00577 Outer membrane usher protein 194 743 4.9E-178 T 13-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 P40_04120 8d6d076c23aa3a97f91a1a9d819aa7cb 836 Pfam PF13954 PapC N-terminal domain 32 175 2.3E-45 T 13-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 P40_04120 8d6d076c23aa3a97f91a1a9d819aa7cb 836 Gene3D G3DSA:2.60.40.2070 750 836 1.2E-21 T 13-10-2018 P40_04120 8d6d076c23aa3a97f91a1a9d819aa7cb 836 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 306 316 - T 13-10-2018 IPR018030 Fimbrial membrane usher, conserved site P40_04120 8d6d076c23aa3a97f91a1a9d819aa7cb 836 Gene3D G3DSA:2.60.40.2610 658 748 1.2E-31 T 13-10-2018 P40_04120 8d6d076c23aa3a97f91a1a9d819aa7cb 836 SUPERFAMILY SSF141729 53 167 2.62E-32 T 13-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 P40_04240 e1b12e6aa5a1042c5cdc5324df8f7970 141 Gene3D G3DSA:3.10.20.400 13 109 7.4E-41 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 P40_04240 e1b12e6aa5a1042c5cdc5324df8f7970 141 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 68 118 5.0E-19 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 P40_04240 e1b12e6aa5a1042c5cdc5324df8f7970 141 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 19 122 31.564 T 13-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 P40_04240 e1b12e6aa5a1042c5cdc5324df8f7970 141 SUPERFAMILY SSF141734 20 131 1.7E-48 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 P40_04240 e1b12e6aa5a1042c5cdc5324df8f7970 141 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 45 118 5.3E-35 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 P40_20690 08bef04ff62ac789e840564b6c6dfbff 311 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 213 1.4E-26 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 P40_20690 08bef04ff62ac789e840564b6c6dfbff 311 SUPERFAMILY SSF51735 1 306 6.2E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_20690 08bef04ff62ac789e840564b6c6dfbff 311 Gene3D G3DSA:3.40.50.720 1 308 2.0E-48 T 13-10-2018 P40_15800 d1e6db7023173a9048065bdb9a6924eb 194 Gene3D G3DSA:1.10.357.10 53 192 2.3E-15 T 13-10-2018 P40_15800 d1e6db7023173a9048065bdb9a6924eb 194 SUPERFAMILY SSF46689 2 67 1.18E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_15800 d1e6db7023173a9048065bdb9a6924eb 194 Gene3D G3DSA:1.10.10.60 1 52 1.4E-13 T 13-10-2018 P40_15800 d1e6db7023173a9048065bdb9a6924eb 194 SUPERFAMILY SSF48498 75 189 1.78E-9 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_15800 d1e6db7023173a9048065bdb9a6924eb 194 Pfam PF16859 Bacterial transcriptional repressor C-terminal 73 183 6.7E-17 T 13-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal P40_15800 d1e6db7023173a9048065bdb9a6924eb 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 4.6E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_16925 497e699007f0b4a708ad51a18bd52474 271 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 265 1.0E-44 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_16925 497e699007f0b4a708ad51a18bd52474 271 SUPERFAMILY SSF52096 7 267 6.83E-73 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_16925 497e699007f0b4a708ad51a18bd52474 271 Gene3D G3DSA:1.10.12.10 210 266 1.8E-17 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_16925 497e699007f0b4a708ad51a18bd52474 271 Gene3D G3DSA:3.90.226.10 3 209 1.8E-65 T 13-10-2018 P40_03450 5931de77e49819bff841010b62e6cb85 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 7.4E-105 T 13-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE P40_03450 5931de77e49819bff841010b62e6cb85 231 Gene3D G3DSA:3.40.50.300 1 230 6.4E-59 T 13-10-2018 P40_03450 5931de77e49819bff841010b62e6cb85 231 SUPERFAMILY SSF52540 2 221 2.71E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03450 5931de77e49819bff841010b62e6cb85 231 SMART SM00382 26 210 6.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_03450 5931de77e49819bff841010b62e6cb85 231 Pfam PF00005 ABC transporter 19 160 7.6E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_17355 5e6c0157593518166e9dd03dde66f131 148 PIRSF PIRSF002070 1 145 1.7E-16 T 13-10-2018 P40_17355 5e6c0157593518166e9dd03dde66f131 148 Pfam PF00436 Single-strand binding protein family 6 106 1.7E-14 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 P40_17355 5e6c0157593518166e9dd03dde66f131 148 SUPERFAMILY SSF50249 4 126 2.88E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_17355 5e6c0157593518166e9dd03dde66f131 148 Gene3D G3DSA:2.40.50.140 1 118 7.3E-26 T 13-10-2018 P40_11160 d012e427608f2c330e67105ac87cefca 211 Pfam PF08239 Bacterial SH3 domain 25 73 1.7E-9 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type P40_11160 d012e427608f2c330e67105ac87cefca 211 SMART SM00287 12 76 6.6E-5 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type P40_11160 d012e427608f2c330e67105ac87cefca 211 Gene3D G3DSA:2.30.30.40 20 78 1.6E-12 T 13-10-2018 P40_11160 d012e427608f2c330e67105ac87cefca 211 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 16 208 3.6E-48 T 13-10-2018 IPR016476 SH3 domain protein P40_16705 0196aff34b90ede6fb9738be12abd344 362 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 362 53.386 T 13-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 P40_16705 0196aff34b90ede6fb9738be12abd344 362 Pfam PF03969 AFG1-like ATPase 1 359 6.3E-145 T 13-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 P40_16705 0196aff34b90ede6fb9738be12abd344 362 Gene3D G3DSA:3.40.50.300 5 184 6.5E-21 T 13-10-2018 P40_16705 0196aff34b90ede6fb9738be12abd344 362 SUPERFAMILY SSF52540 54 204 7.78E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18900 4758122ec5586b9866d098c9509476f7 264 SUPERFAMILY SSF51735 1 259 8.37E-64 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_18900 4758122ec5586b9866d098c9509476f7 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.2E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18900 4758122ec5586b9866d098c9509476f7 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.2E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18900 4758122ec5586b9866d098c9509476f7 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.2E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18900 4758122ec5586b9866d098c9509476f7 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.2E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18900 4758122ec5586b9866d098c9509476f7 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.2E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18900 4758122ec5586b9866d098c9509476f7 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.2E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18900 4758122ec5586b9866d098c9509476f7 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.1E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18900 4758122ec5586b9866d098c9509476f7 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.1E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18900 4758122ec5586b9866d098c9509476f7 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.1E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_18900 4758122ec5586b9866d098c9509476f7 264 Gene3D G3DSA:3.40.50.720 2 263 6.4E-69 T 13-10-2018 P40_18900 4758122ec5586b9866d098c9509476f7 264 Pfam PF00106 short chain dehydrogenase 8 195 3.9E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19080 23da9f4003f9b4ff652d648f712ce819 259 SUPERFAMILY SSF53474 4 245 2.6E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_19080 23da9f4003f9b4ff652d648f712ce819 259 Pfam PF12697 Alpha/beta hydrolase family 4 235 2.1E-19 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_19080 23da9f4003f9b4ff652d648f712ce819 259 Gene3D G3DSA:3.40.50.1820 2 245 2.5E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_10190 b2713ed0c5848854bae7eb3ab0f23b1f 237 Pfam PF14348 Domain of unknown function (DUF4400) 55 234 1.4E-61 T 13-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type P40_10190 b2713ed0c5848854bae7eb3ab0f23b1f 237 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 19 237 2.0E-74 T 13-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type P40_08665 9e3b7782b901fb392cf9ca1bb6ad9e11 152 SUPERFAMILY SSF52402 5 143 9.21E-31 T 13-10-2018 P40_08665 9e3b7782b901fb392cf9ca1bb6ad9e11 152 Gene3D G3DSA:3.40.50.620 2 146 1.0E-30 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_08665 9e3b7782b901fb392cf9ca1bb6ad9e11 152 PIRSF PIRSF006276 2 146 2.1E-32 T 13-10-2018 IPR006015 Universal stress protein A P40_08665 9e3b7782b901fb392cf9ca1bb6ad9e11 152 Pfam PF00582 Universal stress protein family 5 143 1.0E-26 T 13-10-2018 IPR006016 UspA P40_08665 9e3b7782b901fb392cf9ca1bb6ad9e11 152 PRINTS PR01438 Universal stress protein signature 5 23 4.8E-12 T 13-10-2018 IPR006015 Universal stress protein A P40_08665 9e3b7782b901fb392cf9ca1bb6ad9e11 152 PRINTS PR01438 Universal stress protein signature 104 116 4.8E-12 T 13-10-2018 IPR006015 Universal stress protein A P40_08665 9e3b7782b901fb392cf9ca1bb6ad9e11 152 PRINTS PR01438 Universal stress protein signature 121 143 4.8E-12 T 13-10-2018 IPR006015 Universal stress protein A P40_11045 0902fb3a2fce3b93ae326c1a7419e057 410 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 340 3.7E-49 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 P40_11045 0902fb3a2fce3b93ae326c1a7419e057 410 SUPERFAMILY SSF51395 3 342 1.37E-98 T 13-10-2018 P40_11045 0902fb3a2fce3b93ae326c1a7419e057 410 Gene3D G3DSA:3.20.20.70 1 372 4.6E-111 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_09910 3e9c474c16302c7f94952ac6f56b75ed 279 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_09910 3e9c474c16302c7f94952ac6f56b75ed 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.2E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09910 3e9c474c16302c7f94952ac6f56b75ed 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 1.2E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09910 3e9c474c16302c7f94952ac6f56b75ed 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.2E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09910 3e9c474c16302c7f94952ac6f56b75ed 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.6E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09910 3e9c474c16302c7f94952ac6f56b75ed 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.6E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09910 3e9c474c16302c7f94952ac6f56b75ed 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 1.6E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09910 3e9c474c16302c7f94952ac6f56b75ed 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.6E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09910 3e9c474c16302c7f94952ac6f56b75ed 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.6E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09910 3e9c474c16302c7f94952ac6f56b75ed 279 Gene3D G3DSA:3.40.50.720 4 258 3.0E-60 T 13-10-2018 P40_09910 3e9c474c16302c7f94952ac6f56b75ed 279 Pfam PF00106 short chain dehydrogenase 16 207 6.7E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09910 3e9c474c16302c7f94952ac6f56b75ed 279 SUPERFAMILY SSF51735 11 269 5.11E-60 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_13845 9b05126e848531799f937705acf59de7 237 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 13 236 37.951 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 P40_13845 9b05126e848531799f937705acf59de7 237 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 13 230 4.8E-88 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 P40_13845 9b05126e848531799f937705acf59de7 237 Pfam PF13489 Methyltransferase domain 51 204 1.0E-23 T 13-10-2018 P40_13845 9b05126e848531799f937705acf59de7 237 SUPERFAMILY SSF53335 16 230 2.68E-50 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_13845 9b05126e848531799f937705acf59de7 237 Gene3D G3DSA:3.40.50.150 13 236 8.8E-78 T 13-10-2018 P40_07215 e4c1e9bfaff4d9975e5e1e05fc9e529b 355 SUPERFAMILY SSF56935 20 355 9.36E-40 T 13-10-2018 P40_07215 e4c1e9bfaff4d9975e5e1e05fc9e529b 355 Pfam PF13609 Gram-negative porin 12 329 1.5E-24 T 13-10-2018 P40_07215 e4c1e9bfaff4d9975e5e1e05fc9e529b 355 Gene3D G3DSA:2.40.160.10 19 355 4.7E-46 T 13-10-2018 IPR023614 Porin domain superfamily P40_09670 0a0a2f982fb384f6e870e86dfe9a862b 129 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 54 110 8.3E-16 T 13-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal P40_09670 0a0a2f982fb384f6e870e86dfe9a862b 129 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 14 48 1.1E-12 T 13-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal P40_09670 0a0a2f982fb384f6e870e86dfe9a862b 129 SUPERFAMILY SSF50249 6 114 6.0E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_19520 4c77c35c70186e91b1be205b325b856f 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 5.8E-21 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_19520 4c77c35c70186e91b1be205b325b856f 205 SUPERFAMILY SSF46689 6 85 3.09E-23 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_19520 4c77c35c70186e91b1be205b325b856f 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 9.1E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_19520 4c77c35c70186e91b1be205b325b856f 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 9.1E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_19520 4c77c35c70186e91b1be205b325b856f 205 Gene3D G3DSA:1.10.357.10 16 202 1.9E-42 T 13-10-2018 P40_19520 4c77c35c70186e91b1be205b325b856f 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 63 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site P40_21515 eb4a537805b7f218c20da9f65477ede7 346 Pfam PF00355 Rieske [2Fe-2S] domain 22 101 6.7E-19 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 P40_21515 eb4a537805b7f218c20da9f65477ede7 346 SUPERFAMILY SSF50022 11 138 3.8E-34 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_21515 eb4a537805b7f218c20da9f65477ede7 346 Gene3D G3DSA:2.102.10.10 18 147 4.3E-35 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_21515 eb4a537805b7f218c20da9f65477ede7 346 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 63 85 - T 13-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 P40_21515 eb4a537805b7f218c20da9f65477ede7 346 SUPERFAMILY SSF55961 131 342 3.16E-23 T 13-10-2018 P40_14585 2fc138e11922ea1d61d196a5639215e2 66 Pfam PF13617 YnbE-like lipoprotein 10 64 2.8E-27 T 13-10-2018 IPR025985 YnbE-like lipoprotein P40_14585 2fc138e11922ea1d61d196a5639215e2 66 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 22 66 2.0E-13 T 13-10-2018 P40_05110 96b6e541e92bf05426e35ec6e53c4a09 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 156 26.664 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 P40_05110 96b6e541e92bf05426e35ec6e53c4a09 156 PIRSF PIRSF004505 1 156 6.1E-37 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 P40_05110 96b6e541e92bf05426e35ec6e53c4a09 156 SUPERFAMILY SSF75217 1 155 5.89E-42 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases P40_05110 96b6e541e92bf05426e35ec6e53c4a09 156 Gene3D G3DSA:3.40.1280.10 1 156 3.3E-43 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal P40_05110 96b6e541e92bf05426e35ec6e53c4a09 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 155 2.1E-42 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 P40_05110 96b6e541e92bf05426e35ec6e53c4a09 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 1.8E-47 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 P40_09820 64e78181e1bb71c110bff24a403c9773 500 Pfam PF00743 Flavin-binding monooxygenase-like 9 216 5.6E-15 T 13-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 P40_09820 64e78181e1bb71c110bff24a403c9773 500 SUPERFAMILY SSF51905 3 386 2.31E-48 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_04435 33cf455e07b9315af5885ce221e6ec9d 327 Pfam PF04773 FecR protein 123 215 1.8E-15 T 13-10-2018 IPR006860 FecR protein P40_04435 33cf455e07b9315af5885ce221e6ec9d 327 Gene3D G3DSA:2.60.120.1440 115 252 4.0E-18 T 13-10-2018 P40_04435 33cf455e07b9315af5885ce221e6ec9d 327 Pfam PF16344 Domain of unknown function (DUF4974) 226 289 1.1E-7 T 13-10-2018 IPR032508 Protein FecR, C-terminal P40_04435 33cf455e07b9315af5885ce221e6ec9d 327 Pfam PF16220 Domain of unknown function (DUF4880) 17 58 2.8E-13 T 13-10-2018 IPR032623 FecR, N-terminal P40_04435 33cf455e07b9315af5885ce221e6ec9d 327 PIRSF PIRSF018266 6 327 4.8E-68 T 13-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component P40_03080 2b412db4e22545666c45c1766974dacd 425 SUPERFAMILY SSF53756 56 415 4.32E-17 T 13-10-2018 P40_03080 2b412db4e22545666c45c1766974dacd 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 32 210 9.7E-64 T 13-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 P40_03080 2b412db4e22545666c45c1766974dacd 425 Gene3D G3DSA:3.40.50.2000 217 402 9.8E-68 T 13-10-2018 P40_03080 2b412db4e22545666c45c1766974dacd 425 Gene3D G3DSA:3.40.50.11720 32 209 5.3E-45 T 13-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 P40_16345 732b0eaad07c0ce27ee6877abfd8df02 164 Pfam PF08905 Domain of unknown function (DUF1850) 41 128 1.4E-26 T 13-10-2018 IPR015001 Protein of unknown function DUF1850 P40_01345 3b84011f684a968460734dc9d0b71e0d 109 Gene3D G3DSA:1.20.5.50 49 101 4.6E-11 T 13-10-2018 P40_01345 3b84011f684a968460734dc9d0b71e0d 109 Gene3D G3DSA:1.10.20.30 1 48 7.4E-18 T 13-10-2018 P40_01345 3b84011f684a968460734dc9d0b71e0d 109 Pfam PF05164 Cell division protein ZapA 9 92 2.0E-21 T 13-10-2018 IPR007838 Cell division protein ZapA-like P40_01345 3b84011f684a968460734dc9d0b71e0d 109 SUPERFAMILY SSF102829 9 87 1.83E-19 T 13-10-2018 IPR036192 Cell division protein ZapA-like superfamily P40_15465 9a3180e3954dce34c7bbb0e65e98f14a 420 SUPERFAMILY SSF53822 35 383 4.71E-68 T 13-10-2018 IPR028082 Periplasmic binding protein-like I P40_15465 9a3180e3954dce34c7bbb0e65e98f14a 420 Gene3D G3DSA:3.40.50.2300 35 374 1.9E-140 T 13-10-2018 P40_15465 9a3180e3954dce34c7bbb0e65e98f14a 420 Gene3D G3DSA:3.40.50.2300 162 414 1.9E-140 T 13-10-2018 P40_15465 9a3180e3954dce34c7bbb0e65e98f14a 420 Pfam PF13458 Periplasmic binding protein 35 382 3.2E-69 T 13-10-2018 IPR028081 Leucine-binding protein domain P40_07805 4c0c03772f901603850a13a1bd6f0b0c 347 Pfam PF02653 Branched-chain amino acid transport system / permease component 31 293 1.5E-42 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_12895 5fbf52a4cec17ee41a8ecdc204344b5e 156 SMART SM00855 2 112 2.2E-6 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_12895 5fbf52a4cec17ee41a8ecdc204344b5e 156 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 2 152 5.1E-25 T 13-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 P40_12895 5fbf52a4cec17ee41a8ecdc204344b5e 156 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 68 2.4E-10 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_12895 5fbf52a4cec17ee41a8ecdc204344b5e 156 SUPERFAMILY SSF53254 2 137 2.62E-22 T 13-10-2018 IPR029033 Histidine phosphatase superfamily P40_12895 5fbf52a4cec17ee41a8ecdc204344b5e 156 Gene3D G3DSA:3.40.50.1240 1 154 1.4E-31 T 13-10-2018 IPR029033 Histidine phosphatase superfamily P40_13710 e9639d60aea1b401258613c28b7e8076 448 Gene3D G3DSA:3.60.21.70 118 372 5.5E-36 T 13-10-2018 IPR038607 PhoD-like superfamily P40_13710 e9639d60aea1b401258613c28b7e8076 448 Pfam PF09423 PhoD-like phosphatase 122 360 1.6E-27 T 13-10-2018 IPR018946 Alkaline phosphatase D-related P40_13710 e9639d60aea1b401258613c28b7e8076 448 SUPERFAMILY SSF56300 95 374 1.09E-19 T 13-10-2018 P40_04300 d11cd2efaad1a59f5e5ec716c7a52586 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.9E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04300 d11cd2efaad1a59f5e5ec716c7a52586 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.9E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04300 d11cd2efaad1a59f5e5ec716c7a52586 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 2.9E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04300 d11cd2efaad1a59f5e5ec716c7a52586 287 Gene3D G3DSA:3.40.50.720 1 275 2.3E-72 T 13-10-2018 P40_04300 d11cd2efaad1a59f5e5ec716c7a52586 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 4.3E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04300 d11cd2efaad1a59f5e5ec716c7a52586 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.3E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04300 d11cd2efaad1a59f5e5ec716c7a52586 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.3E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04300 d11cd2efaad1a59f5e5ec716c7a52586 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.3E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04300 d11cd2efaad1a59f5e5ec716c7a52586 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 4.3E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04300 d11cd2efaad1a59f5e5ec716c7a52586 287 Pfam PF00106 short chain dehydrogenase 3 202 6.7E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04300 d11cd2efaad1a59f5e5ec716c7a52586 287 SUPERFAMILY SSF51735 2 248 1.23E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_14405 f140ce5b403adfd92396f9b7489be494 675 SUPERFAMILY SSF56935 22 675 1.28E-87 T 13-10-2018 P40_14405 f140ce5b403adfd92396f9b7489be494 675 Gene3D G3DSA:2.40.170.20 173 675 1.3E-66 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_14405 f140ce5b403adfd92396f9b7489be494 675 Gene3D G3DSA:2.170.130.10 43 155 3.6E-14 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_14405 f140ce5b403adfd92396f9b7489be494 675 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 52 675 1.2E-264 T 13-10-2018 IPR010100 TonB-dependent copper receptor P40_14405 f140ce5b403adfd92396f9b7489be494 675 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 149 5.4E-13 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_14405 f140ce5b403adfd92396f9b7489be494 675 Pfam PF00593 TonB dependent receptor 204 674 3.4E-41 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_02550 88bba87fccfc41e8f6655eca8ef6cfdc 270 Gene3D G3DSA:3.30.540.10 3 154 5.0E-49 T 13-10-2018 P40_02550 88bba87fccfc41e8f6655eca8ef6cfdc 270 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 7 255 6.3E-93 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 P40_02550 88bba87fccfc41e8f6655eca8ef6cfdc 270 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 7 257 42.789 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 P40_02550 88bba87fccfc41e8f6655eca8ef6cfdc 270 Gene3D G3DSA:3.40.190.80 155 259 6.0E-35 T 13-10-2018 P40_02550 88bba87fccfc41e8f6655eca8ef6cfdc 270 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site P40_02550 88bba87fccfc41e8f6655eca8ef6cfdc 270 SUPERFAMILY SSF56655 5 265 1.05E-74 T 13-10-2018 P40_02550 88bba87fccfc41e8f6655eca8ef6cfdc 270 Pfam PF00459 Inositol monophosphatase family 12 249 1.1E-50 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P40_02550 88bba87fccfc41e8f6655eca8ef6cfdc 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 5.5E-13 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P40_02550 88bba87fccfc41e8f6655eca8ef6cfdc 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 5.5E-13 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P40_02550 88bba87fccfc41e8f6655eca8ef6cfdc 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 5.5E-13 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P40_02550 88bba87fccfc41e8f6655eca8ef6cfdc 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 5.5E-13 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P40_02550 88bba87fccfc41e8f6655eca8ef6cfdc 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 5.5E-13 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P40_02550 88bba87fccfc41e8f6655eca8ef6cfdc 270 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 216 230 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 P40_07325 92f2591037dd841972478b6db6403cb7 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.0E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_07325 92f2591037dd841972478b6db6403cb7 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.0E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_07325 92f2591037dd841972478b6db6403cb7 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.0E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_07325 92f2591037dd841972478b6db6403cb7 308 Gene3D G3DSA:3.40.190.10 163 268 1.9E-74 T 13-10-2018 P40_07325 92f2591037dd841972478b6db6403cb7 308 SUPERFAMILY SSF46785 1 112 5.7E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_07325 92f2591037dd841972478b6db6403cb7 308 Gene3D G3DSA:1.10.10.10 1 90 4.4E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_07325 92f2591037dd841972478b6db6403cb7 308 SUPERFAMILY SSF53850 89 294 4.34E-39 T 13-10-2018 P40_07325 92f2591037dd841972478b6db6403cb7 308 Gene3D G3DSA:3.40.190.10 91 290 1.9E-74 T 13-10-2018 P40_07325 92f2591037dd841972478b6db6403cb7 308 Pfam PF03466 LysR substrate binding domain 88 291 2.4E-41 T 13-10-2018 IPR005119 LysR, substrate-binding P40_07325 92f2591037dd841972478b6db6403cb7 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.5E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_16100 51ad401da5205b5a9a51785bd1047a33 539 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 487 538 9.9E-9 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain P40_16100 51ad401da5205b5a9a51785bd1047a33 539 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 385 4.6E-79 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 P40_16100 51ad401da5205b5a9a51785bd1047a33 539 Pfam PF00460 Flagella basal body rod protein 5 33 1.9E-6 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 P40_16100 51ad401da5205b5a9a51785bd1047a33 539 PRINTS PR01005 Flagellar hook-associated protein signature 250 272 4.2E-48 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 P40_16100 51ad401da5205b5a9a51785bd1047a33 539 PRINTS PR01005 Flagellar hook-associated protein signature 114 134 4.2E-48 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 P40_16100 51ad401da5205b5a9a51785bd1047a33 539 PRINTS PR01005 Flagellar hook-associated protein signature 433 452 4.2E-48 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 P40_16100 51ad401da5205b5a9a51785bd1047a33 539 PRINTS PR01005 Flagellar hook-associated protein signature 206 224 4.2E-48 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 P40_16100 51ad401da5205b5a9a51785bd1047a33 539 PRINTS PR01005 Flagellar hook-associated protein signature 505 529 4.2E-48 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 P40_16100 51ad401da5205b5a9a51785bd1047a33 539 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 4.2E-48 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 P40_16100 51ad401da5205b5a9a51785bd1047a33 539 PRINTS PR01005 Flagellar hook-associated protein signature 458 479 4.2E-48 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 P40_16100 51ad401da5205b5a9a51785bd1047a33 539 PRINTS PR01005 Flagellar hook-associated protein signature 147 171 4.2E-48 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 P40_16100 51ad401da5205b5a9a51785bd1047a33 539 SUPERFAMILY SSF64518 128 538 7.72E-48 T 13-10-2018 P40_18755 0e55b66ceb8494ee0e27d1ac4b3f3e91 197 Hamap MF_01151 Protein GrpE [grpE]. 10 194 20.844 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 P40_18755 0e55b66ceb8494ee0e27d1ac4b3f3e91 197 ProSitePatterns PS01071 grpE protein signature. 149 192 - T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 P40_18755 0e55b66ceb8494ee0e27d1ac4b3f3e91 197 Gene3D G3DSA:3.90.20.20 5 137 2.0E-24 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 P40_18755 0e55b66ceb8494ee0e27d1ac4b3f3e91 197 Pfam PF01025 GrpE 30 194 2.1E-49 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 P40_18755 0e55b66ceb8494ee0e27d1ac4b3f3e91 197 SUPERFAMILY SSF58014 44 137 3.01E-23 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 P40_18755 0e55b66ceb8494ee0e27d1ac4b3f3e91 197 PRINTS PR00773 GrpE protein signature 63 79 2.5E-25 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 P40_18755 0e55b66ceb8494ee0e27d1ac4b3f3e91 197 PRINTS PR00773 GrpE protein signature 173 192 2.5E-25 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 P40_18755 0e55b66ceb8494ee0e27d1ac4b3f3e91 197 PRINTS PR00773 GrpE protein signature 91 106 2.5E-25 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 P40_18755 0e55b66ceb8494ee0e27d1ac4b3f3e91 197 PRINTS PR00773 GrpE protein signature 146 161 2.5E-25 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 P40_18755 0e55b66ceb8494ee0e27d1ac4b3f3e91 197 SUPERFAMILY SSF51064 139 195 7.45E-19 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 P40_18755 0e55b66ceb8494ee0e27d1ac4b3f3e91 197 Gene3D G3DSA:2.30.22.10 139 194 3.8E-23 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 P40_15115 016999e4d8e1d84108fb1b5dc5b7ea70 172 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 153 4.3E-60 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P40_15115 016999e4d8e1d84108fb1b5dc5b7ea70 172 Gene3D G3DSA:3.30.420.10 2 157 1.3E-50 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_15115 016999e4d8e1d84108fb1b5dc5b7ea70 172 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 5 150 1.5E-55 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P40_15115 016999e4d8e1d84108fb1b5dc5b7ea70 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 5.5E-37 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P40_15115 016999e4d8e1d84108fb1b5dc5b7ea70 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 5.5E-37 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P40_15115 016999e4d8e1d84108fb1b5dc5b7ea70 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 5.5E-37 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P40_15115 016999e4d8e1d84108fb1b5dc5b7ea70 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 5.5E-37 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P40_15115 016999e4d8e1d84108fb1b5dc5b7ea70 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 5.5E-37 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P40_15115 016999e4d8e1d84108fb1b5dc5b7ea70 172 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 13-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 P40_15115 016999e4d8e1d84108fb1b5dc5b7ea70 172 SUPERFAMILY SSF53098 3 154 4.93E-49 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_15115 016999e4d8e1d84108fb1b5dc5b7ea70 172 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 45.295 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P40_05580 987aa4eea6bdaab9d48949df47b4ff2b 243 Pfam PF04536 TPM domain 29 150 5.3E-42 T 13-10-2018 IPR007621 TPM domain P40_05580 987aa4eea6bdaab9d48949df47b4ff2b 243 Gene3D G3DSA:3.10.310.50 16 161 4.1E-55 T 13-10-2018 P40_16545 53984532fd8031f5a46fec9439e046e3 132 Gene3D G3DSA:2.30.30.220 1 120 1.1E-48 T 13-10-2018 IPR036760 SspB-like superfamily P40_16545 53984532fd8031f5a46fec9439e046e3 132 Pfam PF04386 Stringent starvation protein B 4 116 3.6E-34 T 13-10-2018 IPR007481 Stringent starvation protein B P40_16545 53984532fd8031f5a46fec9439e046e3 132 SUPERFAMILY SSF101738 1 114 1.57E-46 T 13-10-2018 IPR036760 SspB-like superfamily P40_16545 53984532fd8031f5a46fec9439e046e3 132 PIRSF PIRSF005276 1 132 2.9E-50 T 13-10-2018 IPR007481 Stringent starvation protein B P40_16810 e9c44fd33002980a728ba2587f2fb03f 99 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 3.1E-28 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 P40_16810 e9c44fd33002980a728ba2587f2fb03f 99 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 3.1E-33 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 P40_16810 e9c44fd33002980a728ba2587f2fb03f 99 Gene3D G3DSA:3.30.160.100 1 99 2.6E-38 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like P40_16810 e9c44fd33002980a728ba2587f2fb03f 99 SUPERFAMILY SSF69754 1 99 4.58E-36 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like P40_20685 77b44723560405b7cd8392273222f02a 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 189 0.0077 T 13-10-2018 P40_20685 77b44723560405b7cd8392273222f02a 268 Pfam PF00106 short chain dehydrogenase 8 194 2.3E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20685 77b44723560405b7cd8392273222f02a 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_20685 77b44723560405b7cd8392273222f02a 268 SUPERFAMILY SSF51735 6 263 1.65E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_20685 77b44723560405b7cd8392273222f02a 268 Gene3D G3DSA:3.40.50.720 2 267 2.6E-53 T 13-10-2018 P40_20685 77b44723560405b7cd8392273222f02a 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 7.0E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20685 77b44723560405b7cd8392273222f02a 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 7.0E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20685 77b44723560405b7cd8392273222f02a 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.0E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20685 77b44723560405b7cd8392273222f02a 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 8.6E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20685 77b44723560405b7cd8392273222f02a 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.6E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20685 77b44723560405b7cd8392273222f02a 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 8.6E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20685 77b44723560405b7cd8392273222f02a 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 8.6E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20685 77b44723560405b7cd8392273222f02a 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 8.6E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_21270 01513cb0a9d88a65b5365cedc99d53e4 462 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 249 458 1.6E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_21270 01513cb0a9d88a65b5365cedc99d53e4 462 Gene3D G3DSA:1.10.3720.10 229 460 5.1E-32 T 13-10-2018 IPR035906 MetI-like superfamily P40_21270 01513cb0a9d88a65b5365cedc99d53e4 462 Pfam PF12501 Phosphate ATP-binding cassette transporter 7 180 8.1E-37 T 13-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 P40_21270 01513cb0a9d88a65b5365cedc99d53e4 462 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 165 457 4.2E-86 T 13-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 P40_21270 01513cb0a9d88a65b5365cedc99d53e4 462 SUPERFAMILY SSF161098 202 449 1.22E-30 T 13-10-2018 IPR035906 MetI-like superfamily P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 SMART SM00387 864 973 3.0E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 SUPERFAMILY SSF47384 747 816 5.69E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 PRINTS PR00344 Bacterial sensor protein C-terminal signature 919 929 4.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 PRINTS PR00344 Bacterial sensor protein C-terminal signature 958 971 4.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 PRINTS PR00344 Bacterial sensor protein C-terminal signature 932 950 4.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 PRINTS PR00344 Bacterial sensor protein C-terminal signature 901 915 4.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 Gene3D G3DSA:1.10.287.130 743 817 1.9E-16 T 13-10-2018 P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 Gene3D G3DSA:3.30.565.10 824 973 5.5E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 631 746 8.0E-8 T 13-10-2018 IPR000014 PAS domain P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 SMART SM00091 630 694 2.7E-4 T 13-10-2018 IPR000014 PAS domain P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 SUPERFAMILY SSF55874 817 972 9.69E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 SUPERFAMILY SSF55785 623 738 7.15E-11 T 13-10-2018 IPR035965 PAS domain superfamily P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 Pfam PF00512 His Kinase A (phospho-acceptor) domain 756 817 5.1E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 864 971 1.6E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 Gene3D G3DSA:1.20.1730.10 38 503 1.1E-12 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 Pfam PF00989 PAS fold 639 736 4.5E-6 T 13-10-2018 IPR013767 PAS fold GO:0006355 P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 Gene3D G3DSA:3.30.450.20 621 742 2.4E-12 T 13-10-2018 P40_18520 d08dd071866ea7ca39da1dd002c90f66 973 SMART SM00388 755 820 1.6E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P40_01490 d2dbe61001d5ba73ab696c8aa13eab8f 84 SUPERFAMILY SSF47598 2 46 4.67E-10 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 P40_01490 d2dbe61001d5ba73ab696c8aa13eab8f 84 Gene3D G3DSA:1.10.8.1250 12 84 4.5E-17 T 13-10-2018 IPR038296 Antitoxin ParD superfamily P40_01490 d2dbe61001d5ba73ab696c8aa13eab8f 84 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 7 72 3.6E-11 T 13-10-2018 IPR022789 Antitoxin ParD P40_01490 d2dbe61001d5ba73ab696c8aa13eab8f 84 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 7 72 3.1E-20 T 13-10-2018 IPR022789 Antitoxin ParD P40_12100 3cf454203fe80c456cfc8c875b77c492 420 Gene3D G3DSA:1.20.1250.20 15 407 9.0E-60 T 13-10-2018 P40_12100 3cf454203fe80c456cfc8c875b77c492 420 Pfam PF07690 Major Facilitator Superfamily 23 253 9.7E-34 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_12100 3cf454203fe80c456cfc8c875b77c492 420 SUPERFAMILY SSF103473 7 404 4.45E-70 T 13-10-2018 IPR036259 MFS transporter superfamily P40_11325 5c2bb8dfa77af679302d79293ce80ed5 494 Gene3D G3DSA:1.10.4100.10 23 472 1.3E-184 T 13-10-2018 P40_11325 5c2bb8dfa77af679302d79293ce80ed5 494 Gene3D G3DSA:3.30.1330.120 298 437 1.3E-184 T 13-10-2018 P40_11325 5c2bb8dfa77af679302d79293ce80ed5 494 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 14 494 1.7E-266 T 13-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 P40_11325 5c2bb8dfa77af679302d79293ce80ed5 494 SUPERFAMILY SSF103378 13 493 3.92E-152 T 13-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 P40_11325 5c2bb8dfa77af679302d79293ce80ed5 494 Pfam PF03972 MmgE/PrpD family 18 477 5.3E-154 T 13-10-2018 IPR005656 MmgE/PrpD GO:0016829 P40_19010 43cc756377c9f979d6480afa348d9d73 338 Gene3D G3DSA:3.40.190.10 122 216 3.6E-53 T 13-10-2018 P40_19010 43cc756377c9f979d6480afa348d9d73 338 Gene3D G3DSA:3.40.190.10 46 330 3.6E-53 T 13-10-2018 P40_19010 43cc756377c9f979d6480afa348d9d73 338 Pfam PF09084 NMT1/THI5 like 51 255 5.3E-29 T 13-10-2018 IPR015168 SsuA/THI5-like P40_19010 43cc756377c9f979d6480afa348d9d73 338 SUPERFAMILY SSF53850 38 263 9.96E-26 T 13-10-2018 P40_02935 676c2873323fdb7e9a5f06284d130f44 76 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 51 3.1E-21 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 P40_02935 676c2873323fdb7e9a5f06284d130f44 76 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 3 71 22.424 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 P40_02935 676c2873323fdb7e9a5f06284d130f44 76 Pfam PF02416 mttA/Hcf106 family 6 57 4.7E-13 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 P40_04355 66412d7d96fe6d10fdd8ce7c69e0b9e4 336 Gene3D G3DSA:2.40.230.10 75 336 2.1E-81 T 13-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 P40_04355 66412d7d96fe6d10fdd8ce7c69e0b9e4 336 SUPERFAMILY SSF56931 76 335 2.88E-83 T 13-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 P40_04355 66412d7d96fe6d10fdd8ce7c69e0b9e4 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 162 181 2.9E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 P40_04355 66412d7d96fe6d10fdd8ce7c69e0b9e4 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 249 267 2.9E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 P40_04355 66412d7d96fe6d10fdd8ce7c69e0b9e4 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 283 300 2.9E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 P40_04355 66412d7d96fe6d10fdd8ce7c69e0b9e4 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 305 325 2.9E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 P40_04355 66412d7d96fe6d10fdd8ce7c69e0b9e4 336 PRINTS PR01486 Bacterial phospholipase A1 protein signature 118 135 2.9E-29 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 P40_04355 66412d7d96fe6d10fdd8ce7c69e0b9e4 336 Pfam PF02253 Phospholipase A1 75 332 3.0E-93 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 P40_18910 f3775091ca13d6754b2d95715495c6ca 312 SUPERFAMILY SSF51197 1 302 6.87E-85 T 13-10-2018 P40_18910 f3775091ca13d6754b2d95715495c6ca 312 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 7 120 1.3E-30 T 13-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain P40_18910 f3775091ca13d6754b2d95715495c6ca 312 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 169 264 1.3E-18 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 P40_18910 f3775091ca13d6754b2d95715495c6ca 312 PRINTS PR00682 Isopenicillin N synthase signature 141 157 3.0E-18 T 13-10-2018 P40_18910 f3775091ca13d6754b2d95715495c6ca 312 PRINTS PR00682 Isopenicillin N synthase signature 226 252 3.0E-18 T 13-10-2018 P40_18910 f3775091ca13d6754b2d95715495c6ca 312 PRINTS PR00682 Isopenicillin N synthase signature 19 36 3.0E-18 T 13-10-2018 P40_18910 f3775091ca13d6754b2d95715495c6ca 312 PRINTS PR00682 Isopenicillin N synthase signature 253 271 3.0E-18 T 13-10-2018 P40_18910 f3775091ca13d6754b2d95715495c6ca 312 Gene3D G3DSA:2.60.120.330 1 306 3.5E-95 T 13-10-2018 IPR027443 Isopenicillin N synthase-like P40_00670 4dc2852f5ae6efd5747a08594ac096da 302 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 13-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P40_00670 4dc2852f5ae6efd5747a08594ac096da 302 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 57.359 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P40_00670 4dc2852f5ae6efd5747a08594ac096da 302 Gene3D G3DSA:3.40.1500.10 1 302 1.9E-137 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P40_00670 4dc2852f5ae6efd5747a08594ac096da 302 SUPERFAMILY SSF102886 5 302 1.44E-138 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P40_00670 4dc2852f5ae6efd5747a08594ac096da 302 Pfam PF01218 Coproporphyrinogen III oxidase 9 302 1.4E-132 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P40_00670 4dc2852f5ae6efd5747a08594ac096da 302 PIRSF PIRSF000166 2 302 5.6E-127 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P40_00670 4dc2852f5ae6efd5747a08594ac096da 302 PRINTS PR00073 Coprogen oxidase signature 125 147 9.5E-89 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P40_00670 4dc2852f5ae6efd5747a08594ac096da 302 PRINTS PR00073 Coprogen oxidase signature 48 69 9.5E-89 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P40_00670 4dc2852f5ae6efd5747a08594ac096da 302 PRINTS PR00073 Coprogen oxidase signature 90 114 9.5E-89 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P40_00670 4dc2852f5ae6efd5747a08594ac096da 302 PRINTS PR00073 Coprogen oxidase signature 262 288 9.5E-89 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P40_00670 4dc2852f5ae6efd5747a08594ac096da 302 PRINTS PR00073 Coprogen oxidase signature 162 191 9.5E-89 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P40_00670 4dc2852f5ae6efd5747a08594ac096da 302 PRINTS PR00073 Coprogen oxidase signature 234 261 9.5E-89 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P40_00670 4dc2852f5ae6efd5747a08594ac096da 302 PRINTS PR00073 Coprogen oxidase signature 31 47 9.5E-89 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P40_19100 f1d22f05feb456e2a93ce7b951289d73 168 SUPERFAMILY SSF53927 11 165 1.78E-39 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 P40_19100 f1d22f05feb456e2a93ce7b951289d73 168 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 12 110 2.9E-16 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain P40_19100 f1d22f05feb456e2a93ce7b951289d73 168 Gene3D G3DSA:3.40.140.10 2 163 2.0E-37 T 13-10-2018 P40_01305 ba94a853cc9d88c7534f71f6df8578be 325 Pfam PF12146 Serine aminopeptidase, S33 70 301 4.6E-31 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 P40_01305 ba94a853cc9d88c7534f71f6df8578be 325 SUPERFAMILY SSF53474 56 317 1.47E-36 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_01305 ba94a853cc9d88c7534f71f6df8578be 325 Gene3D G3DSA:3.40.50.1820 52 318 1.6E-42 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_01305 ba94a853cc9d88c7534f71f6df8578be 325 PRINTS PR00111 Alpha/beta hydrolase fold signature 147 160 1.5E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_01305 ba94a853cc9d88c7534f71f6df8578be 325 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 114 1.5E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_01305 ba94a853cc9d88c7534f71f6df8578be 325 PRINTS PR00111 Alpha/beta hydrolase fold signature 258 272 1.5E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_16025 b7783eb8682c0a8ccc00d60f4986e76d 105 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 7 105 6.0E-23 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 P40_16025 b7783eb8682c0a8ccc00d60f4986e76d 105 Pfam PF02049 Flagellar hook-basal body complex protein FliE 26 105 1.5E-27 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 P40_16025 b7783eb8682c0a8ccc00d60f4986e76d 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 69 85 5.0E-14 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 P40_16025 b7783eb8682c0a8ccc00d60f4986e76d 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 103 5.0E-14 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 P40_16025 b7783eb8682c0a8ccc00d60f4986e76d 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 34 50 5.0E-14 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 P40_16025 b7783eb8682c0a8ccc00d60f4986e76d 105 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 105 16.562 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 P40_01955 230bcf42082cfc674fe8f3a53394e467 541 SUPERFAMILY SSF56801 5 535 9.29E-125 T 13-10-2018 P40_01955 230bcf42082cfc674fe8f3a53394e467 541 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 523 1.0E-9 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_01955 230bcf42082cfc674fe8f3a53394e467 541 Pfam PF00501 AMP-binding enzyme 19 439 1.7E-81 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_01955 230bcf42082cfc674fe8f3a53394e467 541 Gene3D G3DSA:3.40.50.12780 2 434 3.6E-113 T 13-10-2018 P40_01955 230bcf42082cfc674fe8f3a53394e467 541 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_01955 230bcf42082cfc674fe8f3a53394e467 541 Gene3D G3DSA:3.30.300.310 435 537 1.1E-27 T 13-10-2018 P40_13650 16b00218867b09055b7db0469008cbc9 276 Gene3D G3DSA:3.40.140.10 116 264 2.5E-34 T 13-10-2018 P40_13650 16b00218867b09055b7db0469008cbc9 276 SUPERFAMILY SSF53927 16 259 7.52E-61 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 P40_13650 16b00218867b09055b7db0469008cbc9 276 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 5 263 25.835 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 P40_13650 16b00218867b09055b7db0469008cbc9 276 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 24 245 2.0E-43 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 P40_13650 16b00218867b09055b7db0469008cbc9 276 Gene3D G3DSA:3.10.20.10 27 110 2.5E-7 T 13-10-2018 P40_13650 16b00218867b09055b7db0469008cbc9 276 Pfam PF02634 FdhD/NarQ family 25 257 3.5E-57 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 P40_13650 16b00218867b09055b7db0469008cbc9 276 PIRSF PIRSF015626 14 261 6.8E-60 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 P40_19695 50bf6bff51e07cad398630d74fadb107 236 SUPERFAMILY SSF51556 2 235 8.5E-60 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_19695 50bf6bff51e07cad398630d74fadb107 236 Pfam PF04909 Amidohydrolase 3 234 1.4E-31 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P40_19695 50bf6bff51e07cad398630d74fadb107 236 Gene3D G3DSA:3.20.20.140 1 235 2.0E-66 T 13-10-2018 P40_20970 cbc5971256b9ad8d8413deb0c8de652d 250 SUPERFAMILY SSF51735 8 248 3.51E-70 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_20970 cbc5971256b9ad8d8413deb0c8de652d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.0E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20970 cbc5971256b9ad8d8413deb0c8de652d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.0E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20970 cbc5971256b9ad8d8413deb0c8de652d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 5.0E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20970 cbc5971256b9ad8d8413deb0c8de652d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 5.0E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20970 cbc5971256b9ad8d8413deb0c8de652d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.0E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20970 cbc5971256b9ad8d8413deb0c8de652d 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.0E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20970 cbc5971256b9ad8d8413deb0c8de652d 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.8E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20970 cbc5971256b9ad8d8413deb0c8de652d 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.8E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20970 cbc5971256b9ad8d8413deb0c8de652d 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.8E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20970 cbc5971256b9ad8d8413deb0c8de652d 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 4.6E-51 T 13-10-2018 P40_20970 cbc5971256b9ad8d8413deb0c8de652d 250 Gene3D G3DSA:3.40.50.720 1 249 1.0E-70 T 13-10-2018 P40_03600 82384c726551f9ec4465e3a361bdd045 146 Pfam PF01322 Cytochrome C' 26 144 4.1E-35 T 13-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 P40_03600 82384c726551f9ec4465e3a361bdd045 146 Gene3D G3DSA:1.20.120.10 21 146 2.3E-40 T 13-10-2018 P40_03600 82384c726551f9ec4465e3a361bdd045 146 PIRSF PIRSF000027 4 146 2.3E-40 T 13-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 P40_03600 82384c726551f9ec4465e3a361bdd045 146 PRINTS PR00608 Class II cytochrome C signature 133 144 1.2E-6 T 13-10-2018 IPR015984 Cytochrome c prime, subgroup P40_03600 82384c726551f9ec4465e3a361bdd045 146 PRINTS PR00608 Class II cytochrome C signature 110 133 1.2E-6 T 13-10-2018 IPR015984 Cytochrome c prime, subgroup P40_03600 82384c726551f9ec4465e3a361bdd045 146 SUPERFAMILY SSF47175 22 145 6.62E-38 T 13-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 P40_07855 f493fe6625fdb772bcb585095498391d 693 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 30 692 1.2E-121 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 P40_07855 f493fe6625fdb772bcb585095498391d 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 30 133 1.2E-21 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_07855 f493fe6625fdb772bcb585095498391d 693 Gene3D G3DSA:2.170.130.10 6 143 4.0E-40 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_07855 f493fe6625fdb772bcb585095498391d 693 SUPERFAMILY SSF56935 20 693 3.09E-136 T 13-10-2018 P40_07855 f493fe6625fdb772bcb585095498391d 693 Gene3D G3DSA:2.40.170.20 144 693 3.8E-137 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_07855 f493fe6625fdb772bcb585095498391d 693 Pfam PF00593 TonB dependent receptor 213 692 3.2E-61 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_08720 73eb7dc9847c74ea0eee89fa1dc2c159 334 SUPERFAMILY SSF117396 36 327 4.84E-48 T 13-10-2018 IPR036520 UPF0759 superfamily P40_08720 73eb7dc9847c74ea0eee89fa1dc2c159 334 Pfam PF01904 Protein of unknown function DUF72 57 325 3.3E-39 T 13-10-2018 IPR002763 Protein of unknown function DUF72 P40_08720 73eb7dc9847c74ea0eee89fa1dc2c159 334 Gene3D G3DSA:3.20.20.410 28 331 4.0E-31 T 13-10-2018 IPR036520 UPF0759 superfamily P40_17840 148001d5c765b2d1c6e7d99da1194589 541 PIRSF PIRSF006630 248 540 7.0E-117 T 13-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 P40_17840 148001d5c765b2d1c6e7d99da1194589 541 PIRSF PIRSF006630 1 255 1.8E-67 T 13-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 P40_17840 148001d5c765b2d1c6e7d99da1194589 541 Pfam PF02540 NAD synthase 264 513 9.0E-70 T 13-10-2018 IPR022310 NAD/GMP synthase P40_17840 148001d5c765b2d1c6e7d99da1194589 541 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 34 49 - T 13-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 P40_17840 148001d5c765b2d1c6e7d99da1194589 541 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 1 539 28.482 T 13-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 P40_17840 148001d5c765b2d1c6e7d99da1194589 541 Pfam PF00795 Carbon-nitrogen hydrolase 6 240 1.7E-21 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 P40_17840 148001d5c765b2d1c6e7d99da1194589 541 TIGRFAM TIGR00552 nadE: NAD+ synthetase 271 513 4.5E-56 T 13-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 P40_17840 148001d5c765b2d1c6e7d99da1194589 541 Gene3D G3DSA:3.40.50.620 263 540 5.5E-112 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_17840 148001d5c765b2d1c6e7d99da1194589 541 SUPERFAMILY SSF52402 258 522 3.96E-75 T 13-10-2018 P40_17840 148001d5c765b2d1c6e7d99da1194589 541 SUPERFAMILY SSF56317 1 241 8.5E-56 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P40_17840 148001d5c765b2d1c6e7d99da1194589 541 Gene3D G3DSA:3.60.110.10 1 262 2.4E-83 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P40_02930 4dbcdfb3c81786096075f75e7100558d 131 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 68 2.3E-24 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 P40_02930 4dbcdfb3c81786096075f75e7100558d 131 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.0E-22 T 13-10-2018 P40_02930 4dbcdfb3c81786096075f75e7100558d 131 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.0E-22 T 13-10-2018 P40_02930 4dbcdfb3c81786096075f75e7100558d 131 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 4.0E-22 T 13-10-2018 P40_02930 4dbcdfb3c81786096075f75e7100558d 131 Pfam PF02416 mttA/Hcf106 family 4 53 5.5E-9 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 P40_02930 4dbcdfb3c81786096075f75e7100558d 131 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 131 16.838 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 P40_05195 8e3adfa31157c3063ce525c4d4310ea5 162 Pfam PF02130 Uncharacterized protein family UPF0054 39 145 8.4E-38 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 P40_05195 8e3adfa31157c3063ce525c4d4310ea5 162 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 149 4.5E-38 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 P40_05195 8e3adfa31157c3063ce525c4d4310ea5 162 Gene3D G3DSA:3.40.390.30 6 160 4.5E-52 T 13-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 P40_05195 8e3adfa31157c3063ce525c4d4310ea5 162 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 13-10-2018 IPR020549 Endoribonuclease YbeY, conserved site P40_05195 8e3adfa31157c3063ce525c4d4310ea5 162 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 8 155 24.684 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 P40_05195 8e3adfa31157c3063ce525c4d4310ea5 162 SUPERFAMILY SSF55486 7 157 4.15E-49 T 13-10-2018 P40_17670 5062cb979c236a2a740beee5e374096c 64 Gene3D G3DSA:1.10.260.40 1 59 1.4E-10 T 13-10-2018 P40_17670 5062cb979c236a2a740beee5e374096c 64 Pfam PF13560 Helix-turn-helix domain 9 50 3.0E-7 T 13-10-2018 P40_17670 5062cb979c236a2a740beee5e374096c 64 SUPERFAMILY SSF47413 8 46 2.47E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_10485 3bed59c3c3ea52669678c34f5fab95fa 263 SUPERFAMILY SSF55166 122 248 8.63E-25 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 P40_10485 3bed59c3c3ea52669678c34f5fab95fa 263 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 181 241 2.7E-14 T 13-10-2018 IPR039561 Peptidase M15C GO:0008233 P40_10485 3bed59c3c3ea52669678c34f5fab95fa 263 Gene3D G3DSA:3.30.1380.10 118 241 1.9E-23 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 P40_17810 e54d02556a74ffdcdbc14ee3bd4c5274 148 Pfam PF13511 Domain of unknown function (DUF4124) 10 60 1.3E-12 T 13-10-2018 IPR025392 Domain of unknown function DUF4124 P40_00570 b208dd77568cb7279ed78b0b962a08a9 258 Gene3D G3DSA:1.20.120.1630 54 254 3.3E-14 T 13-10-2018 P40_00570 b208dd77568cb7279ed78b0b962a08a9 258 Pfam PF06966 Protein of unknown function (DUF1295) 20 248 2.3E-64 T 13-10-2018 IPR010721 Protein of unknown function DUF1295 P40_01925 318b85587f1348d1f5f588458b6b8ada 187 Gene3D G3DSA:2.160.10.10 3 168 5.7E-48 T 13-10-2018 P40_01925 318b85587f1348d1f5f588458b6b8ada 187 SUPERFAMILY SSF51161 3 147 2.22E-39 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily P40_01925 318b85587f1348d1f5f588458b6b8ada 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 85 118 7.4E-11 T 13-10-2018 IPR001451 Hexapeptide repeat P40_05415 533ed3d73b61b21b7c3ef4e20fdf12b7 116 Gene3D G3DSA:3.10.450.160 4 114 5.6E-7 T 13-10-2018 P40_16560 a107b790a65b22d8592d088474b4f11b 426 SUPERFAMILY SSF81648 294 421 2.83E-28 T 13-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 P40_16560 a107b790a65b22d8592d088474b4f11b 426 Gene3D G3DSA:1.20.810.10 1 425 1.9E-144 T 13-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 P40_16560 a107b790a65b22d8592d088474b4f11b 426 SUPERFAMILY SSF81342 16 292 7.06E-84 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 P40_16560 a107b790a65b22d8592d088474b4f11b 426 PIRSF PIRSF038885 1 426 8.2E-147 T 13-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 P40_16560 a107b790a65b22d8592d088474b4f11b 426 Pfam PF00033 Cytochrome b/b6/petB 26 225 2.6E-53 T 13-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 P40_16560 a107b790a65b22d8592d088474b4f11b 426 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 291 399 5.0E-42 T 13-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 P40_03445 0201c027905200aecee64f4d898eb8ed 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 193 274 4.3E-19 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_03445 0201c027905200aecee64f4d898eb8ed 314 Pfam PF01548 Transposase 10 149 8.3E-23 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_00885 2f8024cfa4a1dcc5d8b56fae4bd17d35 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 1.4E-34 T 13-10-2018 IPR013551 Domain of unknown function DUF1732 P40_00885 2f8024cfa4a1dcc5d8b56fae4bd17d35 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 2.9E-89 T 13-10-2018 IPR005229 Conserved hypothetical protein CHP00255 P40_00885 2f8024cfa4a1dcc5d8b56fae4bd17d35 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 1.2E-40 T 13-10-2018 IPR013527 YicC-like, N-terminal P40_00110 7e7e4ca1730b78f0c00b9b67fece1108 188 Pfam PF05618 Putative ATP-dependant zinc protease 30 163 1.6E-36 T 13-10-2018 P40_00110 7e7e4ca1730b78f0c00b9b67fece1108 188 Gene3D G3DSA:2.40.70.10 27 157 3.5E-40 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily P40_00110 7e7e4ca1730b78f0c00b9b67fece1108 188 SUPERFAMILY SSF50630 30 162 8.44E-36 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily P40_01355 d4f2e9c50aa45fa4125622ac2e84a760 196 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 175 1.0E-24 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 P40_01355 d4f2e9c50aa45fa4125622ac2e84a760 196 Gene3D G3DSA:1.20.120.740 2 186 2.0E-47 T 13-10-2018 P40_01355 d4f2e9c50aa45fa4125622ac2e84a760 196 SUPERFAMILY SSF101327 6 174 1.7E-28 T 13-10-2018 IPR036255 YgfB-like superfamily P40_03680 e179612ca622857e6d693e736deee2ec 484 PRINTS PR00113 Alkaline phosphatase signature 282 311 3.4E-38 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 P40_03680 e179612ca622857e6d693e736deee2ec 484 PRINTS PR00113 Alkaline phosphatase signature 205 215 3.4E-38 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 P40_03680 e179612ca622857e6d693e736deee2ec 484 PRINTS PR00113 Alkaline phosphatase signature 151 171 3.4E-38 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 P40_03680 e179612ca622857e6d693e736deee2ec 484 PRINTS PR00113 Alkaline phosphatase signature 40 60 3.4E-38 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 P40_03680 e179612ca622857e6d693e736deee2ec 484 Gene3D G3DSA:3.40.720.10 26 484 2.5E-143 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 P40_03680 e179612ca622857e6d693e736deee2ec 484 SMART SM00098 41 484 1.4E-95 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 P40_03680 e179612ca622857e6d693e736deee2ec 484 Pfam PF00245 Alkaline phosphatase 40 482 1.4E-106 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 P40_03680 e179612ca622857e6d693e736deee2ec 484 SUPERFAMILY SSF53649 35 484 1.1E-129 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 P40_03405 3f617ad769a8d032d84639ac10bf1355 340 SUPERFAMILY SSF46689 290 339 5.78E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_03405 3f617ad769a8d032d84639ac10bf1355 340 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 211 3.8E-30 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_03405 3f617ad769a8d032d84639ac10bf1355 340 Gene3D G3DSA:1.10.10.60 249 340 2.0E-23 T 13-10-2018 P40_03405 3f617ad769a8d032d84639ac10bf1355 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 1.8E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_03405 3f617ad769a8d032d84639ac10bf1355 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 1.8E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 P40_03405 3f617ad769a8d032d84639ac10bf1355 340 Pfam PF12833 Helix-turn-helix domain 261 338 1.2E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_03405 3f617ad769a8d032d84639ac10bf1355 340 SMART SM00342 255 337 1.9E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_00630 90f800bbb4cd1d39213c427b21a69624 483 Pfam PF02386 Cation transport protein 39 477 3.9E-83 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 P40_00630 90f800bbb4cd1d39213c427b21a69624 483 PIRSF PIRSF006247 1 483 1.0E-168 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 P40_00630 90f800bbb4cd1d39213c427b21a69624 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 466 4.1E-105 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 P40_07595 76e1d9a0f369d1a213ad5f5fefe12c70 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 193 274 6.3E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_07595 76e1d9a0f369d1a213ad5f5fefe12c70 314 Pfam PF01548 Transposase 10 149 4.2E-21 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_12685 a58ba90827c7ce5058de311e0d4d3eb1 257 Gene3D G3DSA:3.20.20.150 1 257 1.2E-78 T 13-10-2018 P40_12685 a58ba90827c7ce5058de311e0d4d3eb1 257 SUPERFAMILY SSF51658 1 255 4.98E-79 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily P40_12685 a58ba90827c7ce5058de311e0d4d3eb1 257 PIRSF PIRSF006241 1 257 4.4E-87 T 13-10-2018 IPR026040 Hydroxypyruvate isomerase-like P40_12685 a58ba90827c7ce5058de311e0d4d3eb1 257 Pfam PF01261 Xylose isomerase-like TIM barrel 22 219 3.2E-32 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain P40_12685 a58ba90827c7ce5058de311e0d4d3eb1 257 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 256 1.4E-107 T 13-10-2018 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 P40_16180 3e966b263fda3ac0022adfe45af4c2b6 152 Pfam PF00583 Acetyltransferase (GNAT) family 47 126 3.0E-15 T 13-10-2018 IPR000182 GNAT domain P40_16180 3e966b263fda3ac0022adfe45af4c2b6 152 Gene3D G3DSA:3.40.630.30 8 152 9.4E-47 T 13-10-2018 P40_16180 3e966b263fda3ac0022adfe45af4c2b6 152 SUPERFAMILY SSF55729 8 152 5.06E-37 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_16180 3e966b263fda3ac0022adfe45af4c2b6 152 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 17 148 1.4E-33 T 13-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 P40_20945 c4cbbf5895e1ca25036384457b81ad19 376 Gene3D G3DSA:3.90.226.10 11 376 1.5E-116 T 13-10-2018 P40_20945 c4cbbf5895e1ca25036384457b81ad19 376 Pfam PF16113 Enoyl-CoA hydratase/isomerase 25 363 5.9E-110 T 13-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 P40_20945 c4cbbf5895e1ca25036384457b81ad19 376 SUPERFAMILY SSF52096 20 350 6.17E-57 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_05970 d50d06d444f70918cbbd6682309f04ba 176 Pfam PF00583 Acetyltransferase (GNAT) family 45 150 1.6E-11 T 13-10-2018 IPR000182 GNAT domain P40_05970 d50d06d444f70918cbbd6682309f04ba 176 SUPERFAMILY SSF55729 46 162 3.95E-16 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_05970 d50d06d444f70918cbbd6682309f04ba 176 Gene3D G3DSA:3.40.630.30 2 169 5.3E-14 T 13-10-2018 P40_21675 ce8c6daf556e6af37c78c571560e2d49 158 SUPERFAMILY SSF54637 11 157 3.32E-39 T 13-10-2018 IPR029069 HotDog domain superfamily P40_21675 ce8c6daf556e6af37c78c571560e2d49 158 Gene3D G3DSA:3.10.129.10 4 157 4.4E-48 T 13-10-2018 P40_21675 ce8c6daf556e6af37c78c571560e2d49 158 Pfam PF01575 MaoC like domain 20 122 4.8E-20 T 13-10-2018 IPR002539 MaoC-like dehydratase domain P40_05950 b6691e47058c654d41f59b556911e86c 420 Pfam PF13657 HipA N-terminal domain 21 126 9.7E-7 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 P40_05950 b6691e47058c654d41f59b556911e86c 420 Pfam PF07804 HipA-like C-terminal domain 172 391 2.0E-49 T 13-10-2018 IPR012893 HipA-like, C-terminal P40_16825 1ae232fa3cd05bbd939464938db916a9 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.4E-28 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like P40_16825 1ae232fa3cd05bbd939464938db916a9 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site P40_16825 1ae232fa3cd05bbd939464938db916a9 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.3E-15 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like P40_16825 1ae232fa3cd05bbd939464938db916a9 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.3E-15 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like P40_16825 1ae232fa3cd05bbd939464938db916a9 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.3E-15 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like P40_16825 1ae232fa3cd05bbd939464938db916a9 89 SUPERFAMILY SSF55594 1 88 2.22E-28 T 13-10-2018 IPR035895 HPr-like superfamily P40_16825 1ae232fa3cd05bbd939464938db916a9 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 6.0E-30 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like P40_16825 1ae232fa3cd05bbd939464938db916a9 89 Gene3D G3DSA:3.30.1340.10 1 88 2.2E-30 T 13-10-2018 IPR035895 HPr-like superfamily P40_16825 1ae232fa3cd05bbd939464938db916a9 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site P40_11275 be392092002f49b65b49714a54cce9ec 448 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 389 398 - T 13-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 P40_11275 be392092002f49b65b49714a54cce9ec 448 Pfam PF00067 Cytochrome P450 226 429 3.3E-61 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_11275 be392092002f49b65b49714a54cce9ec 448 Pfam PF00067 Cytochrome P450 20 193 7.1E-10 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_11275 be392092002f49b65b49714a54cce9ec 448 Gene3D G3DSA:1.10.630.10 12 448 2.6E-118 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_11275 be392092002f49b65b49714a54cce9ec 448 PRINTS PR00385 P450 superfamily signature 387 396 1.7E-6 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_11275 be392092002f49b65b49714a54cce9ec 448 PRINTS PR00385 P450 superfamily signature 260 277 1.7E-6 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_11275 be392092002f49b65b49714a54cce9ec 448 PRINTS PR00385 P450 superfamily signature 311 322 1.7E-6 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_11275 be392092002f49b65b49714a54cce9ec 448 PRINTS PR00385 P450 superfamily signature 396 407 1.7E-6 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_11275 be392092002f49b65b49714a54cce9ec 448 PRINTS PR00465 E-class P450 group IV signature 251 277 1.2E-19 T 13-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_11275 be392092002f49b65b49714a54cce9ec 448 PRINTS PR00465 E-class P450 group IV signature 355 373 1.2E-19 T 13-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_11275 be392092002f49b65b49714a54cce9ec 448 PRINTS PR00465 E-class P450 group IV signature 396 414 1.2E-19 T 13-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_11275 be392092002f49b65b49714a54cce9ec 448 PRINTS PR00465 E-class P450 group IV signature 306 322 1.2E-19 T 13-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_11275 be392092002f49b65b49714a54cce9ec 448 PRINTS PR00465 E-class P450 group IV signature 380 396 1.2E-19 T 13-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_11275 be392092002f49b65b49714a54cce9ec 448 PRINTS PR00465 E-class P450 group IV signature 339 353 1.2E-19 T 13-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_11275 be392092002f49b65b49714a54cce9ec 448 SUPERFAMILY SSF48264 16 447 1.96E-106 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 P40_21105 8e88b480d75c10632782ea2a94ec637a 294 SUPERFAMILY SSF53807 23 282 2.99E-39 T 13-10-2018 P40_21105 8e88b480d75c10632782ea2a94ec637a 294 Gene3D G3DSA:3.40.50.1980 27 186 9.6E-28 T 13-10-2018 P40_21105 8e88b480d75c10632782ea2a94ec637a 294 Gene3D G3DSA:3.40.50.1980 187 292 1.6E-14 T 13-10-2018 P40_21105 8e88b480d75c10632782ea2a94ec637a 294 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 280 2.3E-29 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 P40_09020 f5b11f1f5be584417ad15473ca6793b1 264 SUPERFAMILY SSF51735 6 263 2.04E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_09020 f5b11f1f5be584417ad15473ca6793b1 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 262 4.0E-52 T 13-10-2018 P40_09020 f5b11f1f5be584417ad15473ca6793b1 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_09020 f5b11f1f5be584417ad15473ca6793b1 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.1E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09020 f5b11f1f5be584417ad15473ca6793b1 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.1E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09020 f5b11f1f5be584417ad15473ca6793b1 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.1E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09020 f5b11f1f5be584417ad15473ca6793b1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.5E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09020 f5b11f1f5be584417ad15473ca6793b1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 6.5E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09020 f5b11f1f5be584417ad15473ca6793b1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.5E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09020 f5b11f1f5be584417ad15473ca6793b1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 6.5E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09020 f5b11f1f5be584417ad15473ca6793b1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 6.5E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09020 f5b11f1f5be584417ad15473ca6793b1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.5E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_09020 f5b11f1f5be584417ad15473ca6793b1 264 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 11 263 1.6E-92 T 13-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 P40_09020 f5b11f1f5be584417ad15473ca6793b1 264 Gene3D G3DSA:3.40.50.720 2 263 5.9E-76 T 13-10-2018 P40_03070 703c573759c61fe3707acbb121544b63 261 SUPERFAMILY SSF51430 5 253 3.8E-52 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_03070 703c573759c61fe3707acbb121544b63 261 Pfam PF00248 Aldo/keto reductase family 17 214 1.2E-33 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain P40_03070 703c573759c61fe3707acbb121544b63 261 PRINTS PR00069 Aldo-keto reductase signature 112 130 6.9E-7 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_03070 703c573759c61fe3707acbb121544b63 261 PRINTS PR00069 Aldo-keto reductase signature 51 75 6.9E-7 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_03070 703c573759c61fe3707acbb121544b63 261 PRINTS PR00069 Aldo-keto reductase signature 145 162 6.9E-7 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 P40_03070 703c573759c61fe3707acbb121544b63 261 Gene3D G3DSA:3.20.20.100 1 260 2.5E-91 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily P40_14995 20b4727bb23eed33e399e11c12bbfc98 482 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 440 2.4E-167 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 P40_14995 20b4727bb23eed33e399e11c12bbfc98 482 PIRSF PIRSF006446 2 465 5.2E-221 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 P40_20390 65e89bc1c45f2ee3d92bc4612f84bb56 237 Gene3D G3DSA:3.30.70.1560 131 212 9.8E-55 T 13-10-2018 P40_20390 65e89bc1c45f2ee3d92bc4612f84bb56 237 Gene3D G3DSA:3.30.70.580 66 229 9.8E-55 T 13-10-2018 P40_20390 65e89bc1c45f2ee3d92bc4612f84bb56 237 SUPERFAMILY SSF55174 1 93 2.75E-9 T 13-10-2018 P40_20390 65e89bc1c45f2ee3d92bc4612f84bb56 237 SUPERFAMILY SSF55120 64 229 6.08E-46 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_20390 65e89bc1c45f2ee3d92bc4612f84bb56 237 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 227 2.6E-49 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 P40_20390 65e89bc1c45f2ee3d92bc4612f84bb56 237 Gene3D G3DSA:3.10.290.10 1 65 2.0E-8 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 P40_20390 65e89bc1c45f2ee3d92bc4612f84bb56 237 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 P40_20390 65e89bc1c45f2ee3d92bc4612f84bb56 237 Pfam PF00849 RNA pseudouridylate synthase 65 195 2.3E-15 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_20665 bb07fa6eea954b3bc1bfc0211f3661c4 213 Pfam PF13489 Methyltransferase domain 63 200 1.6E-24 T 13-10-2018 P40_20665 bb07fa6eea954b3bc1bfc0211f3661c4 213 SUPERFAMILY SSF53335 49 204 4.6E-22 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_20665 bb07fa6eea954b3bc1bfc0211f3661c4 213 Gene3D G3DSA:3.40.50.150 43 208 6.5E-15 T 13-10-2018 P40_13410 e0ec818eff96d8c97c5ef8f556c34fe7 445 SUPERFAMILY SSF56954 1 425 1.02E-82 T 13-10-2018 P40_13410 e0ec818eff96d8c97c5ef8f556c34fe7 445 Pfam PF02321 Outer membrane efflux protein 237 421 2.7E-30 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_13410 e0ec818eff96d8c97c5ef8f556c34fe7 445 Pfam PF02321 Outer membrane efflux protein 22 214 4.7E-27 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_13410 e0ec818eff96d8c97c5ef8f556c34fe7 445 Gene3D G3DSA:1.20.1600.10 21 442 1.4E-88 T 13-10-2018 P40_13410 e0ec818eff96d8c97c5ef8f556c34fe7 445 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 19 433 4.7E-94 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 P40_11860 591daf802906212b6ca527310a393000 259 Gene3D G3DSA:3.90.226.10 1 199 7.8E-63 T 13-10-2018 P40_11860 591daf802906212b6ca527310a393000 259 Gene3D G3DSA:1.10.12.10 201 259 4.9E-21 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_11860 591daf802906212b6ca527310a393000 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 257 1.7E-53 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_11860 591daf802906212b6ca527310a393000 259 SUPERFAMILY SSF52096 4 257 3.47E-74 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_21045 daf754b4117c22e2595c5f520494aacc 269 Pfam PF00924 Mechanosensitive ion channel 58 255 3.7E-61 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 P40_21045 daf754b4117c22e2595c5f520494aacc 269 SUPERFAMILY SSF50182 100 166 4.9E-17 T 13-10-2018 IPR010920 LSM domain superfamily P40_21045 daf754b4117c22e2595c5f520494aacc 269 Gene3D G3DSA:2.30.30.60 116 165 3.8E-21 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily P40_21045 daf754b4117c22e2595c5f520494aacc 269 Gene3D G3DSA:3.30.70.100 166 260 3.6E-31 T 13-10-2018 P40_21045 daf754b4117c22e2595c5f520494aacc 269 SUPERFAMILY SSF82689 168 265 7.19E-37 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 P40_21045 daf754b4117c22e2595c5f520494aacc 269 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 130 164 - T 13-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 P40_21045 daf754b4117c22e2595c5f520494aacc 269 SUPERFAMILY SSF82861 16 99 1.96E-18 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 P40_21100 bbfbe51aa87cef5a9dbfa71c4f819a0e 375 Pfam PF12876 Sugar-binding cellulase-like 17 372 9.0E-135 T 13-10-2018 IPR024778 Putative cellulase P40_21100 bbfbe51aa87cef5a9dbfa71c4f819a0e 375 Gene3D G3DSA:3.20.20.80 3 375 2.0E-78 T 13-10-2018 P40_00770 a3edc9d386962baae3ddd11a329a4515 163 Pfam PF00731 AIR carboxylase 5 151 8.8E-62 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 P40_00770 a3edc9d386962baae3ddd11a329a4515 163 SUPERFAMILY SSF52255 5 157 9.94E-63 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 P40_00770 a3edc9d386962baae3ddd11a329a4515 163 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 31.303 T 13-10-2018 IPR033747 Class I PurE P40_00770 a3edc9d386962baae3ddd11a329a4515 163 PIRSF PIRSF001338 1 162 6.6E-64 T 13-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 P40_00770 a3edc9d386962baae3ddd11a329a4515 163 Gene3D G3DSA:3.40.50.7700 1 162 1.4E-68 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 P40_00770 a3edc9d386962baae3ddd11a329a4515 163 SMART SM01001 3 154 3.3E-97 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 P40_00770 a3edc9d386962baae3ddd11a329a4515 163 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 157 1.8E-62 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 P40_20985 9352ea9cd03ad665b1268daa09fc408a 185 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 158 1.7E-22 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_05350 329852cdc6a27a17da7b05af9ab55f19 195 Pfam PF04011 LemA family 9 194 3.8E-57 T 13-10-2018 IPR007156 LemA P40_05350 329852cdc6a27a17da7b05af9ab55f19 195 Gene3D G3DSA:1.20.1440.20 14 195 2.0E-54 T 13-10-2018 IPR023353 LemA-like domain superfamily P40_05350 329852cdc6a27a17da7b05af9ab55f19 195 SUPERFAMILY SSF140478 24 172 3.01E-46 T 13-10-2018 IPR023353 LemA-like domain superfamily P40_06695 70ee1fb309d2344c563464f673abf2bd 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.8E-7 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_06695 70ee1fb309d2344c563464f673abf2bd 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 3.8E-7 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_06695 70ee1fb309d2344c563464f673abf2bd 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.8E-7 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_06695 70ee1fb309d2344c563464f673abf2bd 117 SMART SM00422 1 69 1.9E-23 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_06695 70ee1fb309d2344c563464f673abf2bd 117 Pfam PF13411 MerR HTH family regulatory protein 1 66 1.0E-19 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_06695 70ee1fb309d2344c563464f673abf2bd 117 SUPERFAMILY SSF46955 1 115 1.1E-28 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_06695 70ee1fb309d2344c563464f673abf2bd 117 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_06695 70ee1fb309d2344c563464f673abf2bd 117 Gene3D G3DSA:1.10.1660.10 1 116 9.0E-32 T 13-10-2018 P40_06085 5c2e2b3a64f94b1c2155f864a26d6a22 369 Gene3D G3DSA:3.20.20.10 10 223 6.0E-30 T 13-10-2018 IPR029066 PLP-binding barrel P40_06085 5c2e2b3a64f94b1c2155f864a26d6a22 369 Pfam PF01168 Alanine racemase, N-terminal domain 8 225 5.9E-26 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 P40_06085 5c2e2b3a64f94b1c2155f864a26d6a22 369 SUPERFAMILY SSF51419 9 225 4.19E-32 T 13-10-2018 IPR029066 PLP-binding barrel P40_19020 3c75a842f5f9e239ba3284996b08c41e 224 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 11 207 1.8E-42 T 13-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 P40_19020 3c75a842f5f9e239ba3284996b08c41e 224 Gene3D G3DSA:3.40.50.360 6 211 2.0E-58 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_19020 3c75a842f5f9e239ba3284996b08c41e 224 Pfam PF03358 NADPH-dependent FMN reductase 13 153 2.4E-9 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 P40_19020 3c75a842f5f9e239ba3284996b08c41e 224 SUPERFAMILY SSF52218 11 208 1.19E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_19200 099de45ed6f8abd70b904e0b28e9a6ac 256 Pfam PF00005 ABC transporter 18 178 3.0E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_19200 099de45ed6f8abd70b904e0b28e9a6ac 256 Gene3D G3DSA:3.40.50.300 1 252 3.9E-60 T 13-10-2018 P40_19200 099de45ed6f8abd70b904e0b28e9a6ac 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 227 249 1.0E-11 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal P40_19200 099de45ed6f8abd70b904e0b28e9a6ac 256 SUPERFAMILY SSF52540 2 249 1.85E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_19200 099de45ed6f8abd70b904e0b28e9a6ac 256 SMART SM00382 26 227 5.2E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_06805 a253080d7ba7f669dd5300ac1670da0c 103 Gene3D G3DSA:3.10.450.40 38 103 1.5E-9 T 13-10-2018 P40_06805 a253080d7ba7f669dd5300ac1670da0c 103 Pfam PF03413 Peptidase propeptide and YPEB domain 43 99 4.2E-12 T 13-10-2018 IPR025711 PepSY domain P40_12995 33860db5ebfa40d2ef9633b0948e370b 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 7.5E-136 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_12995 33860db5ebfa40d2ef9633b0948e370b 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 P40_12995 33860db5ebfa40d2ef9633b0948e370b 428 PIRSF PIRSF001369 38 428 7.1E-178 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type P40_12995 33860db5ebfa40d2ef9633b0948e370b 428 Gene3D G3DSA:2.20.28.60 1 50 4.3E-21 T 13-10-2018 P40_12995 33860db5ebfa40d2ef9633b0948e370b 428 SUPERFAMILY SSF48256 5 427 1.44E-171 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 P40_12995 33860db5ebfa40d2ef9633b0948e370b 428 Gene3D G3DSA:1.10.580.10 57 410 6.9E-151 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 P40_12995 33860db5ebfa40d2ef9633b0948e370b 428 Gene3D G3DSA:1.10.230.10 268 376 6.9E-151 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain P40_12995 33860db5ebfa40d2ef9633b0948e370b 428 PRINTS PR00143 Citrate synthase signature 379 393 1.7E-56 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_12995 33860db5ebfa40d2ef9633b0948e370b 428 PRINTS PR00143 Citrate synthase signature 241 269 1.7E-56 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_12995 33860db5ebfa40d2ef9633b0948e370b 428 PRINTS PR00143 Citrate synthase signature 219 234 1.7E-56 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_12995 33860db5ebfa40d2ef9633b0948e370b 428 PRINTS PR00143 Citrate synthase signature 165 178 1.7E-56 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_12995 33860db5ebfa40d2ef9633b0948e370b 428 PRINTS PR00143 Citrate synthase signature 359 375 1.7E-56 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_12995 33860db5ebfa40d2ef9633b0948e370b 428 PRINTS PR00143 Citrate synthase signature 296 316 1.7E-56 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 P40_12995 33860db5ebfa40d2ef9633b0948e370b 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 420 3.8E-237 T 13-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 P40_06010 002961cfd9947c08411c27c115800cba 147 Gene3D G3DSA:1.10.10.10 2 147 9.8E-43 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_06010 002961cfd9947c08411c27c115800cba 147 Pfam PF01638 HxlR-like helix-turn-helix 19 104 1.4E-19 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type P40_06010 002961cfd9947c08411c27c115800cba 147 SUPERFAMILY SSF46785 7 142 2.83E-38 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_13765 4d5dcd90460710aa8771b96deb7ec083 176 Pfam PF05433 Glycine zipper 2TM domain 74 114 6.6E-10 T 13-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 SUPERFAMILY SSF51419 66 344 2.45E-63 T 13-10-2018 IPR029066 PLP-binding barrel P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 Gene3D G3DSA:1.20.58.930 364 457 3.2E-211 T 13-10-2018 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 TIGRFAM TIGR01273 speA: arginine decarboxylase 11 626 3.0E-229 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 97 115 5.1E-12 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 332 351 5.1E-12 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 238 251 5.1E-12 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 536 549 5.1E-12 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 Gene3D G3DSA:3.20.20.10 66 347 3.2E-211 T 13-10-2018 IPR029066 PLP-binding barrel P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 87 342 4.1E-45 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 PIRSF PIRSF001336 4 626 1.5E-224 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 PRINTS PR01180 Arginine decarboxylase signature 322 339 3.5E-67 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 PRINTS PR01180 Arginine decarboxylase signature 486 511 3.5E-67 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 PRINTS PR01180 Arginine decarboxylase signature 65 80 3.5E-67 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 PRINTS PR01180 Arginine decarboxylase signature 145 160 3.5E-67 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 PRINTS PR01180 Arginine decarboxylase signature 171 192 3.5E-67 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 PRINTS PR01180 Arginine decarboxylase signature 461 482 3.5E-67 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 PRINTS PR01180 Arginine decarboxylase signature 89 103 3.5E-67 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 PRINTS PR01180 Arginine decarboxylase signature 195 217 3.5E-67 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 PRINTS PR01180 Arginine decarboxylase signature 536 557 3.5E-67 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 P40_20295 3478e78c021619184aea1aa5fbfd6fe8 626 Gene3D G3DSA:2.40.37.10 13 563 3.2E-211 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 P40_11975 35b90f638fcc98df767cc56deaab1ce0 252 Pfam PF09836 Putative DNA-binding domain 9 94 1.2E-26 T 13-10-2018 IPR018640 Putative DNA-binding domain, bacteria P40_11975 35b90f638fcc98df767cc56deaab1ce0 252 Gene3D G3DSA:1.10.150.690 34 124 1.0E-28 T 13-10-2018 P40_06680 9b4b050843d702a76705aab1027a186b 186 SMART SM00507 79 132 1.1E-13 T 13-10-2018 IPR003615 HNH nuclease P40_06680 9b4b050843d702a76705aab1027a186b 186 Pfam PF14279 HNH endonuclease 92 146 5.2E-21 T 13-10-2018 IPR029471 HNH endonuclease 5 P40_06680 9b4b050843d702a76705aab1027a186b 186 Gene3D G3DSA:3.30.40.60 68 166 2.1E-24 T 13-10-2018 P40_14480 5ca966091361044e25876c3478a6c5ee 304 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 252 2.7E-38 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_14480 5ca966091361044e25876c3478a6c5ee 304 Gene3D G3DSA:3.90.226.10 3 292 2.9E-91 T 13-10-2018 P40_14480 5ca966091361044e25876c3478a6c5ee 304 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 117 137 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 P40_14480 5ca966091361044e25876c3478a6c5ee 304 SUPERFAMILY SSF52096 13 252 1.99E-56 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_08185 fcf9f0bf81bada4864d929b3d26effc0 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 19 53 4.5E-8 T 13-10-2018 P40_08185 fcf9f0bf81bada4864d929b3d26effc0 84 Gene3D G3DSA:3.40.1620.10 18 51 8.4E-8 T 13-10-2018 P40_08185 fcf9f0bf81bada4864d929b3d26effc0 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 67 5.5E-12 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM P40_08185 fcf9f0bf81bada4864d929b3d26effc0 84 SUPERFAMILY SSF143120 4 69 1.7E-12 T 13-10-2018 IPR036165 YefM-like superfamily P40_03555 86e0b5371b00ff820ebf06e3b9ac0285 94 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 4.9E-41 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 P40_03555 86e0b5371b00ff820ebf06e3b9ac0285 94 PIRSF PIRSF029827 1 90 5.4E-38 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 P40_03555 86e0b5371b00ff820ebf06e3b9ac0285 94 Gene3D G3DSA:1.10.3880.10 1 92 2.7E-37 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 P40_03555 86e0b5371b00ff820ebf06e3b9ac0285 94 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 73 2.0E-27 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 P40_03555 86e0b5371b00ff820ebf06e3b9ac0285 94 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 26.812 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 P40_03555 86e0b5371b00ff820ebf06e3b9ac0285 94 SUPERFAMILY SSF111148 1 90 3.14E-39 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 P40_13030 950ddee60214e09490b945b7065f904c 235 SMART SM00953 84 212 3.2E-33 T 13-10-2018 IPR014914 RES domain P40_13030 950ddee60214e09490b945b7065f904c 235 Pfam PF08808 RES domain 72 220 5.1E-30 T 13-10-2018 IPR014914 RES domain P40_04955 d4b817ded696c0ff1dc24250c97fd4e9 174 Gene3D G3DSA:3.30.530.20 5 174 4.6E-42 T 13-10-2018 IPR023393 START-like domain superfamily P40_04955 d4b817ded696c0ff1dc24250c97fd4e9 174 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 22 148 2.2E-17 T 13-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like P40_04955 d4b817ded696c0ff1dc24250c97fd4e9 174 SUPERFAMILY SSF55961 2 171 1.36E-36 T 13-10-2018 P40_16850 94e8a31c3415f03368431eafaa001a77 179 Gene3D G3DSA:1.10.60.30 19 94 1.5E-21 T 13-10-2018 P40_16850 94e8a31c3415f03368431eafaa001a77 179 Pfam PF04751 Protein of unknown function (DUF615) 10 154 9.2E-27 T 13-10-2018 IPR006839 Ribosome-associated, YjgA P40_16850 94e8a31c3415f03368431eafaa001a77 179 SUPERFAMILY SSF158710 19 145 2.62E-24 T 13-10-2018 IPR023153 PSPTO4464-like domain superfamily P40_13520 358f35ec1bef098f9ba3aceb8ce50acb 155 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_13520 358f35ec1bef098f9ba3aceb8ce50acb 155 Gene3D G3DSA:1.20.1260.10 1 154 9.7E-59 T 13-10-2018 IPR012347 Ferritin-like P40_13520 358f35ec1bef098f9ba3aceb8ce50acb 155 PIRSF PIRSF002560 1 155 6.3E-59 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_13520 358f35ec1bef098f9ba3aceb8ce50acb 155 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 6.9E-43 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_13520 358f35ec1bef098f9ba3aceb8ce50acb 155 SUPERFAMILY SSF47240 1 154 6.58E-43 T 13-10-2018 IPR009078 Ferritin-like superfamily P40_13520 358f35ec1bef098f9ba3aceb8ce50acb 155 Pfam PF00210 Ferritin-like domain 9 143 1.5E-33 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 P40_13520 358f35ec1bef098f9ba3aceb8ce50acb 155 PRINTS PR00601 Bacterioferritin signature 3 22 8.2E-39 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_13520 358f35ec1bef098f9ba3aceb8ce50acb 155 PRINTS PR00601 Bacterioferritin signature 23 43 8.2E-39 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_13520 358f35ec1bef098f9ba3aceb8ce50acb 155 PRINTS PR00601 Bacterioferritin signature 85 105 8.2E-39 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_13520 358f35ec1bef098f9ba3aceb8ce50acb 155 PRINTS PR00601 Bacterioferritin signature 128 149 8.2E-39 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_13520 358f35ec1bef098f9ba3aceb8ce50acb 155 PRINTS PR00601 Bacterioferritin signature 106 126 8.2E-39 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_13520 358f35ec1bef098f9ba3aceb8ce50acb 155 PRINTS PR00601 Bacterioferritin signature 44 64 8.2E-39 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 P40_05835 7a822f666042eb3dca14145b32de51dc 296 SUPERFAMILY SSF52151 40 226 8.11E-46 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase P40_05835 7a822f666042eb3dca14145b32de51dc 296 Pfam PF01734 Patatin-like phospholipase 44 201 2.7E-24 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 P40_05835 7a822f666042eb3dca14145b32de51dc 296 Gene3D G3DSA:3.40.1090.10 24 144 1.8E-28 T 13-10-2018 P40_21235 023441d0d2d05cf5967cff1187352d9e 234 Pfam PF03358 NADPH-dependent FMN reductase 28 170 1.6E-28 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 P40_21235 023441d0d2d05cf5967cff1187352d9e 234 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 4 220 9.3E-125 T 13-10-2018 IPR014063 Arsenate resistance ArsH P40_21235 023441d0d2d05cf5967cff1187352d9e 234 Gene3D G3DSA:3.40.50.360 1 234 8.2E-81 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_21235 023441d0d2d05cf5967cff1187352d9e 234 SUPERFAMILY SSF52218 2 221 3.56E-68 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_17095 18e396fd22fcc14d1dd13680c72f8f54 290 SUPERFAMILY SSF47616 176 248 1.95E-10 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_17095 18e396fd22fcc14d1dd13680c72f8f54 290 SUPERFAMILY SSF52833 47 145 1.35E-20 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_17095 18e396fd22fcc14d1dd13680c72f8f54 290 Gene3D G3DSA:3.40.30.10 43 146 1.3E-17 T 13-10-2018 P40_17095 18e396fd22fcc14d1dd13680c72f8f54 290 Gene3D G3DSA:1.20.1050.10 167 268 8.3E-8 T 13-10-2018 P40_17095 18e396fd22fcc14d1dd13680c72f8f54 290 Pfam PF14497 Glutathione S-transferase, C-terminal domain 200 245 3.5E-6 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal P40_17095 18e396fd22fcc14d1dd13680c72f8f54 290 Pfam PF13417 Glutathione S-transferase, N-terminal domain 50 123 5.7E-16 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_10990 b336d7146a4ba65547f1987fef42f37f 457 Pfam PF06969 HemN C-terminal domain 367 432 1.6E-9 T 13-10-2018 IPR010723 HemN, C-terminal P40_10990 b336d7146a4ba65547f1987fef42f37f 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 3 457 7.1E-172 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 P40_10990 b336d7146a4ba65547f1987fef42f37f 457 Gene3D G3DSA:1.10.10.920 366 457 9.0E-26 T 13-10-2018 P40_10990 b336d7146a4ba65547f1987fef42f37f 457 SMART SM00729 50 273 9.5E-46 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 P40_10990 b336d7146a4ba65547f1987fef42f37f 457 Gene3D G3DSA:3.80.30.20 1 364 4.8E-117 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe P40_10990 b336d7146a4ba65547f1987fef42f37f 457 SUPERFAMILY SSF102114 2 444 5.89E-129 T 13-10-2018 P40_10990 b336d7146a4ba65547f1987fef42f37f 457 PIRSF PIRSF000167 3 455 3.1E-159 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 P40_10990 b336d7146a4ba65547f1987fef42f37f 457 Pfam PF04055 Radical SAM superfamily 56 219 1.6E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P40_01365 a5eaba1e82d6cc69f756c881e045a487 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 1.9E-13 T 13-10-2018 P40_01365 a5eaba1e82d6cc69f756c881e045a487 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 1.9E-13 T 13-10-2018 P40_01365 a5eaba1e82d6cc69f756c881e045a487 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.9E-13 T 13-10-2018 P40_01365 a5eaba1e82d6cc69f756c881e045a487 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 1.9E-13 T 13-10-2018 P40_01365 a5eaba1e82d6cc69f756c881e045a487 390 SUPERFAMILY SSF51905 7 380 7.92E-45 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_01365 a5eaba1e82d6cc69f756c881e045a487 390 Gene3D G3DSA:3.50.50.60 7 336 5.0E-80 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_01365 a5eaba1e82d6cc69f756c881e045a487 390 Pfam PF01494 FAD binding domain 7 338 4.2E-22 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 P40_01365 a5eaba1e82d6cc69f756c881e045a487 390 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 388 1.7E-96 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 P40_01365 a5eaba1e82d6cc69f756c881e045a487 390 Gene3D G3DSA:3.30.9.50 82 271 5.0E-80 T 13-10-2018 P40_08895 de15ab3487db4d39eb59d4ed5b1b5783 440 Pfam PF01882 Protein of unknown function DUF58 196 280 2.4E-26 T 13-10-2018 IPR002881 Domain of unknown function DUF58 P40_15680 f21b88bfdb8f7ebc57d1ea8c30ac04f3 552 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 5.0E-39 T 13-10-2018 P40_15680 f21b88bfdb8f7ebc57d1ea8c30ac04f3 552 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 5.0E-39 T 13-10-2018 P40_15680 f21b88bfdb8f7ebc57d1ea8c30ac04f3 552 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 331 347 5.0E-39 T 13-10-2018 P40_15680 f21b88bfdb8f7ebc57d1ea8c30ac04f3 552 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 313 331 5.0E-39 T 13-10-2018 P40_15680 f21b88bfdb8f7ebc57d1ea8c30ac04f3 552 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 5.0E-39 T 13-10-2018 P40_15680 f21b88bfdb8f7ebc57d1ea8c30ac04f3 552 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 5.0E-39 T 13-10-2018 P40_15680 f21b88bfdb8f7ebc57d1ea8c30ac04f3 552 Pfam PF01494 FAD binding domain 8 344 6.0E-75 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 P40_15680 f21b88bfdb8f7ebc57d1ea8c30ac04f3 552 Gene3D G3DSA:3.30.70.2450 184 269 1.2E-104 T 13-10-2018 P40_15680 f21b88bfdb8f7ebc57d1ea8c30ac04f3 552 Gene3D G3DSA:3.50.50.60 10 344 1.2E-104 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_15680 f21b88bfdb8f7ebc57d1ea8c30ac04f3 552 SUPERFAMILY SSF51905 8 392 1.5E-63 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_15680 f21b88bfdb8f7ebc57d1ea8c30ac04f3 552 SUPERFAMILY SSF52833 412 549 9.39E-5 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_14290 d805fb051492c58279b8f122e5887197 149 Pfam PF02082 Transcriptional regulator 1 80 5.5E-24 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type P40_14290 d805fb051492c58279b8f122e5887197 149 SUPERFAMILY SSF46785 2 132 8.13E-38 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_14290 d805fb051492c58279b8f122e5887197 149 Gene3D G3DSA:1.10.10.10 1 140 1.1E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14290 d805fb051492c58279b8f122e5887197 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 3.2E-37 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type P40_01115 6923c9dae729a00d31b2e5c55b7a109e 440 Gene3D G3DSA:1.20.1250.20 49 440 5.9E-8 T 13-10-2018 P40_01115 6923c9dae729a00d31b2e5c55b7a109e 440 SUPERFAMILY SSF103473 68 437 1.96E-17 T 13-10-2018 IPR036259 MFS transporter superfamily P40_12780 91da52008fb332676c4e2ce7cb8d935d 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 386 3.2E-47 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme P40_12780 91da52008fb332676c4e2ce7cb8d935d 403 SUPERFAMILY SSF53686 11 397 3.67E-151 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme P40_12780 91da52008fb332676c4e2ce7cb8d935d 403 Gene3D G3DSA:3.40.50.1100 18 214 1.2E-189 T 13-10-2018 P40_12780 91da52008fb332676c4e2ce7cb8d935d 403 Gene3D G3DSA:3.40.50.1100 62 392 1.2E-189 T 13-10-2018 P40_12780 91da52008fb332676c4e2ce7cb8d935d 403 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 P40_12780 91da52008fb332676c4e2ce7cb8d935d 403 PIRSF PIRSF001413 3 403 2.3E-165 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 P40_12780 91da52008fb332676c4e2ce7cb8d935d 403 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 399 53.187 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 P40_12780 91da52008fb332676c4e2ce7cb8d935d 403 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 397 1.8E-191 T 13-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 P40_02480 0eab4f11653fbc4f2f209c71f5cbcc96 174 Gene3D G3DSA:2.60.30.10 44 174 1.6E-57 T 13-10-2018 IPR036560 Methylamine/Aralkylamine dehydrogenase light chain superfamily GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 P40_02480 0eab4f11653fbc4f2f209c71f5cbcc96 174 Pfam PF02975 Methylamine dehydrogenase, L chain 62 170 2.6E-51 T 13-10-2018 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 P40_02480 0eab4f11653fbc4f2f209c71f5cbcc96 174 SUPERFAMILY SSF57561 57 172 1.7E-54 T 13-10-2018 IPR036560 Methylamine/Aralkylamine dehydrogenase light chain superfamily GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 P40_02480 0eab4f11653fbc4f2f209c71f5cbcc96 174 PIRSF PIRSF000192 1 173 3.7E-53 T 13-10-2018 IPR016008 Amine dehydrogenase light chain GO:0009308|GO:0030058|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 P40_02225 39b6b8507916ef2dab955e6501884b20 595 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 7 350 7.8E-119 T 13-10-2018 IPR010839 Acyclic terpene utilisation P40_01735 8e5265f9e5e33335bb9645c9ab0eef2a 197 Pfam PF06940 Domain of unknown function (DUF1287) 21 183 2.1E-68 T 13-10-2018 IPR009706 Protein of unknown function DUF1287 P40_01735 8e5265f9e5e33335bb9645c9ab0eef2a 197 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 19 183 5.0E-51 T 13-10-2018 IPR009706 Protein of unknown function DUF1287 P40_01735 8e5265f9e5e33335bb9645c9ab0eef2a 197 PIRSF PIRSF011444 4 185 5.0E-78 T 13-10-2018 IPR009706 Protein of unknown function DUF1287 P40_04485 d43436b0755a254195790472a238e2f8 187 Pfam PF03358 NADPH-dependent FMN reductase 6 146 3.3E-28 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 P40_04485 d43436b0755a254195790472a238e2f8 187 Gene3D G3DSA:3.40.50.360 1 187 3.0E-42 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_04485 d43436b0755a254195790472a238e2f8 187 SUPERFAMILY SSF52218 1 174 3.57E-34 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_01375 e4cbb6bc565f95a4307219ab06c2504a 336 Pfam PF13343 Bacterial extracellular solute-binding protein 77 308 1.4E-23 T 13-10-2018 P40_01375 e4cbb6bc565f95a4307219ab06c2504a 336 SUPERFAMILY SSF53850 28 332 9.45E-79 T 13-10-2018 P40_01375 e4cbb6bc565f95a4307219ab06c2504a 336 Gene3D G3DSA:3.40.190.10 128 334 2.3E-118 T 13-10-2018 P40_01375 e4cbb6bc565f95a4307219ab06c2504a 336 Gene3D G3DSA:3.40.190.10 31 299 2.3E-118 T 13-10-2018 P40_01375 e4cbb6bc565f95a4307219ab06c2504a 336 PIRSF PIRSF002825 1 336 1.2E-94 T 13-10-2018 IPR026045 Ferric binding protein P40_08530 dd321b2c28d70cb003ef718b4722bbf7 541 SUPERFAMILY SSF56801 20 539 1.05E-119 T 13-10-2018 P40_08530 dd321b2c28d70cb003ef718b4722bbf7 541 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_08530 dd321b2c28d70cb003ef718b4722bbf7 541 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 530 8.1E-13 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_08530 dd321b2c28d70cb003ef718b4722bbf7 541 Gene3D G3DSA:3.40.50.12780 3 439 3.7E-85 T 13-10-2018 P40_08530 dd321b2c28d70cb003ef718b4722bbf7 541 Pfam PF00501 AMP-binding enzyme 30 444 1.5E-73 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_08530 dd321b2c28d70cb003ef718b4722bbf7 541 Gene3D G3DSA:3.30.300.310 440 541 1.0E-29 T 13-10-2018 P40_15975 0d930282e13396e0ed5982911dcef0b2 108 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 98 2.9E-35 T 13-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 P40_15975 0d930282e13396e0ed5982911dcef0b2 108 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 10 98 7.0E-14 T 13-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 P40_15975 0d930282e13396e0ed5982911dcef0b2 108 Gene3D G3DSA:1.10.4000.10 1 107 1.3E-33 T 13-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily P40_15975 0d930282e13396e0ed5982911dcef0b2 108 SUPERFAMILY SSF63592 1 97 1.57E-29 T 13-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily P40_15975 0d930282e13396e0ed5982911dcef0b2 108 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 21.079 T 13-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 P40_08705 239451c3a53a2c7db9d2b5968fd8cf14 187 SUPERFAMILY SSF53271 21 185 1.11E-43 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like P40_08705 239451c3a53a2c7db9d2b5968fd8cf14 187 Gene3D G3DSA:3.40.50.2020 4 187 1.4E-51 T 13-10-2018 P40_08705 239451c3a53a2c7db9d2b5968fd8cf14 187 Pfam PF00156 Phosphoribosyl transferase domain 19 148 8.9E-26 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 P40_17100 31de4e94635ee1fb03c414ab0a9d6dea 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.301 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 P40_17100 31de4e94635ee1fb03c414ab0a9d6dea 363 SUPERFAMILY SSF81271 279 360 8.72E-37 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 P40_17100 31de4e94635ee1fb03c414ab0a9d6dea 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.4E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_17100 31de4e94635ee1fb03c414ab0a9d6dea 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.4E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_17100 31de4e94635ee1fb03c414ab0a9d6dea 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.4E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_17100 31de4e94635ee1fb03c414ab0a9d6dea 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.4E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_17100 31de4e94635ee1fb03c414ab0a9d6dea 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 5.6E-22 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_17100 31de4e94635ee1fb03c414ab0a9d6dea 363 Gene3D G3DSA:1.10.150.300 113 200 1.3E-152 T 13-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 P40_17100 31de4e94635ee1fb03c414ab0a9d6dea 363 SUPERFAMILY SSF52540 3 301 5.44E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_17100 31de4e94635ee1fb03c414ab0a9d6dea 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 4.6E-40 T 13-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 P40_17100 31de4e94635ee1fb03c414ab0a9d6dea 363 Gene3D G3DSA:3.10.20.30 48 361 1.3E-152 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_17100 31de4e94635ee1fb03c414ab0a9d6dea 363 PIRSF PIRSF006641 1 363 3.6E-155 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 P40_17100 31de4e94635ee1fb03c414ab0a9d6dea 363 Gene3D G3DSA:3.40.50.300 4 278 1.3E-152 T 13-10-2018 P40_17100 31de4e94635ee1fb03c414ab0a9d6dea 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 3.2E-160 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 P40_12975 9df07b0e90ce83643afbcd2dc2aa7216 238 SUPERFAMILY SSF54292 2 107 8.16E-26 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 P40_12975 9df07b0e90ce83643afbcd2dc2aa7216 238 SUPERFAMILY SSF46548 108 237 1.03E-38 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P40_12975 9df07b0e90ce83643afbcd2dc2aa7216 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 5 230 4.7E-83 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12975 9df07b0e90ce83643afbcd2dc2aa7216 238 Gene3D G3DSA:3.10.20.30 1 107 3.8E-33 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_12975 9df07b0e90ce83643afbcd2dc2aa7216 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 2.4E-9 T 13-10-2018 P40_12975 9df07b0e90ce83643afbcd2dc2aa7216 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 3 112 1.9E-30 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12975 9df07b0e90ce83643afbcd2dc2aa7216 238 Gene3D G3DSA:1.10.1060.10 108 238 2.2E-56 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P40_12975 9df07b0e90ce83643afbcd2dc2aa7216 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P40_06050 c442f71995c4cc61e832e245cd060bd6 116 SUPERFAMILY SSF54593 7 112 9.93E-26 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_06050 c442f71995c4cc61e832e245cd060bd6 116 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 111 2.9E-9 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain P40_06050 c442f71995c4cc61e832e245cd060bd6 116 Gene3D G3DSA:3.10.180.10 14 116 6.3E-30 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_08330 d3c384974f29b11fd6424a0764d254a8 396 SUPERFAMILY SSF53383 5 395 3.44E-115 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_08330 d3c384974f29b11fd6424a0764d254a8 396 Gene3D G3DSA:3.40.640.10 65 288 1.3E-135 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_08330 d3c384974f29b11fd6424a0764d254a8 396 Pfam PF00155 Aminotransferase class I and II 34 390 1.1E-72 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_08330 d3c384974f29b11fd6424a0764d254a8 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 238 251 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 P40_08330 d3c384974f29b11fd6424a0764d254a8 396 Gene3D G3DSA:3.90.1150.10 28 390 1.3E-135 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P40_02680 c82c65fb298d743f1407d28d33edaa5a 81 Pfam PF07362 Post-segregation antitoxin CcdA 11 81 4.9E-30 T 13-10-2018 IPR009956 Post-segregation antitoxin CcdA P40_06245 063ca0eba666e0f606a859e98a56df45 189 SMART SM00460 65 129 0.0079 T 13-10-2018 IPR002931 Transglutaminase-like P40_06245 063ca0eba666e0f606a859e98a56df45 189 Gene3D G3DSA:3.10.620.30 1 139 1.4E-16 T 13-10-2018 P40_06245 063ca0eba666e0f606a859e98a56df45 189 SUPERFAMILY SSF54001 15 133 1.57E-25 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily P40_06245 063ca0eba666e0f606a859e98a56df45 189 Pfam PF01841 Transglutaminase-like superfamily 19 127 9.1E-18 T 13-10-2018 IPR002931 Transglutaminase-like P40_09090 ddcfb8b83dc47757614058005d1f7418 144 Gene3D G3DSA:3.10.129.10 6 138 6.1E-35 T 13-10-2018 P40_09090 ddcfb8b83dc47757614058005d1f7418 144 Pfam PF13279 Thioesterase-like superfamily 16 134 3.1E-12 T 13-10-2018 P40_09090 ddcfb8b83dc47757614058005d1f7418 144 SUPERFAMILY SSF54637 3 140 1.46E-37 T 13-10-2018 IPR029069 HotDog domain superfamily P40_01595 26c9725f65c08b49740e49be4ac6a17a 120 SUPERFAMILY SSF142906 1 118 5.49E-32 T 13-10-2018 IPR038056 YjbR-like superfamily P40_01595 26c9725f65c08b49740e49be4ac6a17a 120 Gene3D G3DSA:3.90.1150.30 1 119 1.5E-11 T 13-10-2018 IPR038056 YjbR-like superfamily P40_01595 26c9725f65c08b49740e49be4ac6a17a 120 Pfam PF04237 YjbR 12 102 1.2E-13 T 13-10-2018 IPR007351 Uncharacterised protein YjbR P40_21185 239c67ae0c9d6c7ac63fce7e79b7b5c3 150 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 1 146 19.486 T 13-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 P40_21185 239c67ae0c9d6c7ac63fce7e79b7b5c3 150 SUPERFAMILY SSF64288 2 144 8.63E-32 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily P40_21185 239c67ae0c9d6c7ac63fce7e79b7b5c3 150 Pfam PF04345 Chorismate lyase 1 146 2.0E-17 T 13-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 P40_21185 239c67ae0c9d6c7ac63fce7e79b7b5c3 150 Gene3D G3DSA:3.40.1410.10 1 144 2.0E-35 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily P40_03135 7e76f52ab97ffb9c882f15b8abc0e6c1 438 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 433 3.0E-85 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_03135 7e76f52ab97ffb9c882f15b8abc0e6c1 438 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 426 1.0E-87 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_03135 7e76f52ab97ffb9c882f15b8abc0e6c1 438 PIRSF PIRSF006066 4 438 1.0E-94 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_19715 3c98c7c5cfdc0a294871e040ee040c4b 536 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.2E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_19715 3c98c7c5cfdc0a294871e040ee040c4b 536 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.2E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_19715 3c98c7c5cfdc0a294871e040ee040c4b 536 Gene3D G3DSA:1.10.10.10 14 85 1.8E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_19715 3c98c7c5cfdc0a294871e040ee040c4b 536 Gene3D G3DSA:3.20.20.140 258 536 2.8E-83 T 13-10-2018 P40_19715 3c98c7c5cfdc0a294871e040ee040c4b 536 SUPERFAMILY SSF48008 96 228 6.02E-20 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_19715 3c98c7c5cfdc0a294871e040ee040c4b 536 Pfam PF04909 Amidohydrolase 272 536 8.4E-41 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P40_19715 3c98c7c5cfdc0a294871e040ee040c4b 536 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 7.4E-21 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_19715 3c98c7c5cfdc0a294871e040ee040c4b 536 Pfam PF07729 FCD domain 99 219 1.6E-19 T 13-10-2018 IPR011711 GntR, C-terminal P40_19715 3c98c7c5cfdc0a294871e040ee040c4b 536 SUPERFAMILY SSF51556 267 536 2.38E-73 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_19715 3c98c7c5cfdc0a294871e040ee040c4b 536 Gene3D G3DSA:1.20.120.530 94 230 4.2E-22 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal P40_19715 3c98c7c5cfdc0a294871e040ee040c4b 536 SUPERFAMILY SSF46785 10 79 5.62E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_19715 3c98c7c5cfdc0a294871e040ee040c4b 536 SMART SM00345 16 75 4.0E-22 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 P40_19715 3c98c7c5cfdc0a294871e040ee040c4b 536 SMART SM00895 99 224 2.9E-17 T 13-10-2018 IPR011711 GntR, C-terminal P40_01825 4ce9cc420d994f7c799e69e723fc8c60 130 Gene3D G3DSA:1.20.120.550 2 130 5.8E-22 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily P40_01825 4ce9cc420d994f7c799e69e723fc8c60 130 Pfam PF01124 MAPEG family 6 125 8.8E-24 T 13-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein P40_01825 4ce9cc420d994f7c799e69e723fc8c60 130 SUPERFAMILY SSF161084 3 127 4.71E-24 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily P40_15025 187fe4036c3edb9176d8265eb9a54fb7 178 Gene3D G3DSA:3.30.70.260 90 175 7.0E-20 T 13-10-2018 P40_15025 187fe4036c3edb9176d8265eb9a54fb7 178 Pfam PF13740 ACT domain 7 78 7.0E-18 T 13-10-2018 P40_15025 187fe4036c3edb9176d8265eb9a54fb7 178 SUPERFAMILY SSF55021 92 174 1.59E-17 T 13-10-2018 P40_15025 187fe4036c3edb9176d8265eb9a54fb7 178 Gene3D G3DSA:3.30.70.260 2 87 1.5E-21 T 13-10-2018 P40_15025 187fe4036c3edb9176d8265eb9a54fb7 178 PIRSF PIRSF028103 4 178 1.3E-49 T 13-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 P40_15025 187fe4036c3edb9176d8265eb9a54fb7 178 SUPERFAMILY SSF55021 5 75 2.08E-13 T 13-10-2018 P40_13980 b5d66a4b1fee0a9dca9bcdc9693800be 138 Gene3D G3DSA:2.60.40.790 31 137 7.8E-24 T 13-10-2018 IPR008978 HSP20-like chaperone P40_13980 b5d66a4b1fee0a9dca9bcdc9693800be 138 Pfam PF00011 Hsp20/alpha crystallin family 38 136 5.4E-19 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain P40_13980 b5d66a4b1fee0a9dca9bcdc9693800be 138 SUPERFAMILY SSF49764 8 136 5.58E-21 T 13-10-2018 IPR008978 HSP20-like chaperone P40_06975 cb662d60140ff4606db3d5b2cf4c08a2 232 PIRSF PIRSF006232 2 231 6.2E-52 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 P40_06975 cb662d60140ff4606db3d5b2cf4c08a2 232 Gene3D G3DSA:2.60.120.10 8 231 3.9E-83 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_06975 cb662d60140ff4606db3d5b2cf4c08a2 232 Gene3D G3DSA:2.60.120.10 11 134 3.9E-83 T 13-10-2018 IPR014710 RmlC-like jelly roll fold P40_06975 cb662d60140ff4606db3d5b2cf4c08a2 232 Pfam PF02678 Pirin 11 118 6.2E-36 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 P40_06975 cb662d60140ff4606db3d5b2cf4c08a2 232 SUPERFAMILY SSF51182 1 231 6.84E-72 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_15715 b716c6cf49549b45e798c0a6834a0217 183 Gene3D G3DSA:3.10.129.10 19 141 3.4E-15 T 13-10-2018 P40_15715 b716c6cf49549b45e798c0a6834a0217 183 Pfam PF13279 Thioesterase-like superfamily 30 125 1.2E-13 T 13-10-2018 P40_15715 b716c6cf49549b45e798c0a6834a0217 183 SUPERFAMILY SSF54637 23 161 2.91E-24 T 13-10-2018 IPR029069 HotDog domain superfamily P40_10860 263760877cf022a1abd6dd80c627529a 106 SUPERFAMILY SSF82199 7 105 3.27E-14 T 13-10-2018 P40_10860 263760877cf022a1abd6dd80c627529a 106 Pfam PF00856 SET domain 66 102 2.3E-4 T 13-10-2018 IPR001214 SET domain GO:0005515 P40_10860 263760877cf022a1abd6dd80c627529a 106 Gene3D G3DSA:2.170.270.10 6 106 2.4E-12 T 13-10-2018 P40_13015 1e52f14b223437d64aa15dd9013b3054 291 Gene3D G3DSA:1.10.1040.10 165 291 3.8E-38 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 P40_13015 1e52f14b223437d64aa15dd9013b3054 291 PIRSF PIRSF000103 1 291 1.1E-73 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 P40_13015 1e52f14b223437d64aa15dd9013b3054 291 SUPERFAMILY SSF51735 4 165 3.7E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_13015 1e52f14b223437d64aa15dd9013b3054 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 13-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 P40_13015 1e52f14b223437d64aa15dd9013b3054 291 Gene3D G3DSA:3.40.50.720 2 164 7.4E-52 T 13-10-2018 P40_13015 1e52f14b223437d64aa15dd9013b3054 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 286 1.0E-33 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 P40_13015 1e52f14b223437d64aa15dd9013b3054 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 164 2.7E-48 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 P40_13015 1e52f14b223437d64aa15dd9013b3054 291 SUPERFAMILY SSF48179 165 289 5.33E-38 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P40_10400 615ecb68212a59340f1878c0d05dd2f2 264 Gene3D G3DSA:3.40.50.1820 2 254 9.0E-38 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_10400 615ecb68212a59340f1878c0d05dd2f2 264 SUPERFAMILY SSF53474 6 255 5.27E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_10400 615ecb68212a59340f1878c0d05dd2f2 264 Pfam PF12697 Alpha/beta hydrolase family 28 245 1.4E-16 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_07515 e8f45ddfac34288944402389e2da869e 346 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 78 298 8.7E-25 T 13-10-2018 IPR018713 Domain of unknown function DUF2236 P40_06500 20149c12d9f09ed42013cfcd710e3660 393 Gene3D G3DSA:3.40.50.20 2 122 1.3E-51 T 13-10-2018 P40_06500 20149c12d9f09ed42013cfcd710e3660 393 Gene3D G3DSA:3.30.1490.20 123 196 2.3E-32 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_06500 20149c12d9f09ed42013cfcd710e3660 393 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 8 392 52.004 T 13-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 P40_06500 20149c12d9f09ed42013cfcd710e3660 393 Pfam PF01370 NAD dependent epimerase/dehydratase family 19 81 1.6E-4 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 P40_06500 20149c12d9f09ed42013cfcd710e3660 393 SUPERFAMILY SSF52440 3 112 3.88E-32 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P40_06500 20149c12d9f09ed42013cfcd710e3660 393 Gene3D G3DSA:3.30.470.20 197 391 1.9E-60 T 13-10-2018 P40_06500 20149c12d9f09ed42013cfcd710e3660 393 SUPERFAMILY SSF56059 113 315 1.11E-58 T 13-10-2018 P40_06500 20149c12d9f09ed42013cfcd710e3660 393 SUPERFAMILY SSF51246 319 391 5.34E-16 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 P40_06500 20149c12d9f09ed42013cfcd710e3660 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 391 1.7E-181 T 13-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 P40_06500 20149c12d9f09ed42013cfcd710e3660 393 Pfam PF02222 ATP-grasp domain 123 294 1.8E-54 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type P40_02785 2d91872873c63effdc396c958eee9495 82 Gene3D G3DSA:3.10.20.30 5 82 1.2E-7 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_02785 2d91872873c63effdc396c958eee9495 82 SUPERFAMILY SSF54285 7 82 2.06E-7 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp P40_02785 2d91872873c63effdc396c958eee9495 82 Pfam PF02597 ThiS family 7 82 3.1E-7 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 P40_17645 f86fdb779b2334f0b6f5e7d9b5f0e5e4 158 Pfam PF04002 RadC-like JAB domain 38 156 8.1E-43 T 13-10-2018 IPR025657 RadC-like JAB domain P40_17645 f86fdb779b2334f0b6f5e7d9b5f0e5e4 158 Gene3D G3DSA:3.40.140.10 35 158 3.6E-43 T 13-10-2018 P40_17645 f86fdb779b2334f0b6f5e7d9b5f0e5e4 158 SUPERFAMILY SSF102712 59 128 4.05E-5 T 13-10-2018 P40_17645 f86fdb779b2334f0b6f5e7d9b5f0e5e4 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 22 158 7.0E-44 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 P40_17645 f86fdb779b2334f0b6f5e7d9b5f0e5e4 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site P40_02810 9b5157a8ee9398384777d59db06d49ff 394 Gene3D G3DSA:2.70.70.10 249 382 2.2E-32 T 13-10-2018 IPR011055 Duplicated hybrid motif P40_02810 9b5157a8ee9398384777d59db06d49ff 394 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 29 227 0.004 T 13-10-2018 P40_02810 9b5157a8ee9398384777d59db06d49ff 394 SUPERFAMILY SSF51261 222 381 1.31E-42 T 13-10-2018 IPR011055 Duplicated hybrid motif P40_02810 9b5157a8ee9398384777d59db06d49ff 394 Pfam PF01551 Peptidase family M23 285 377 1.1E-22 T 13-10-2018 IPR016047 Peptidase M23 P40_11825 7e614b7b5df7f5e31f90393c1f263276 139 Pfam PF00571 CBS domain 7 60 2.3E-10 T 13-10-2018 IPR000644 CBS domain P40_11825 7e614b7b5df7f5e31f90393c1f263276 139 Pfam PF00571 CBS domain 73 127 6.7E-15 T 13-10-2018 IPR000644 CBS domain P40_11825 7e614b7b5df7f5e31f90393c1f263276 139 Gene3D G3DSA:3.10.580.10 1 136 6.0E-33 T 13-10-2018 P40_11825 7e614b7b5df7f5e31f90393c1f263276 139 SUPERFAMILY SSF54631 2 128 7.83E-35 T 13-10-2018 P40_11825 7e614b7b5df7f5e31f90393c1f263276 139 SMART SM00116 14 61 3.2E-7 T 13-10-2018 IPR000644 CBS domain P40_11825 7e614b7b5df7f5e31f90393c1f263276 139 SMART SM00116 80 127 4.9E-8 T 13-10-2018 IPR000644 CBS domain P40_06545 2d5fce7c3310eff2907de4e49d4e6efb 72 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 2.1E-18 T 13-10-2018 IPR010710 Protein of unknown function DUF1289 P40_03950 be906b2e1a531de1727799e23a1f8781 624 SUPERFAMILY SSF50998 444 613 1.26E-10 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily P40_03950 be906b2e1a531de1727799e23a1f8781 624 Gene3D G3DSA:2.130.10.10 509 624 9.9E-8 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_07140 754117482a8db064f565e1fd4369660a 230 Pfam PF11967 Recombination protein O N terminal 15 81 8.3E-11 T 13-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal P40_07140 754117482a8db064f565e1fd4369660a 230 TIGRFAM TIGR00613 reco: DNA repair protein RecO 18 154 2.1E-19 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 P40_07140 754117482a8db064f565e1fd4369660a 230 Pfam PF02565 Recombination protein O C terminal 87 224 3.4E-19 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 P40_07140 754117482a8db064f565e1fd4369660a 230 SUPERFAMILY SSF50249 15 79 7.88E-9 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_07140 754117482a8db064f565e1fd4369660a 230 Hamap MF_00201 DNA repair protein RecO [recO]. 10 229 17.69 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 P40_07140 754117482a8db064f565e1fd4369660a 230 Gene3D G3DSA:1.20.1440.120 84 230 5.4E-48 T 13-10-2018 P40_07140 754117482a8db064f565e1fd4369660a 230 SUPERFAMILY SSF57863 90 216 5.23E-7 T 13-10-2018 IPR037278 ARFGAP/RecO-like zinc finger P40_07140 754117482a8db064f565e1fd4369660a 230 Gene3D G3DSA:2.40.50.140 11 82 4.6E-19 T 13-10-2018 P40_10695 af3a449066c92ada78107268cd63fac8 246 Pfam PF07314 Protein of unknown function (DUF1461) 28 199 9.6E-7 T 13-10-2018 IPR010178 Integral membrane protein 1906 P40_07625 b06c236476f3246633901512e74798fe 209 SUPERFAMILY SSF48498 81 203 1.37E-12 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_07625 b06c236476f3246633901512e74798fe 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 2.0E-19 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_07625 b06c236476f3246633901512e74798fe 209 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 56 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site P40_07625 b06c236476f3246633901512e74798fe 209 SUPERFAMILY SSF46689 10 84 5.64E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_07625 b06c236476f3246633901512e74798fe 209 Gene3D G3DSA:1.10.10.60 6 56 7.8E-20 T 13-10-2018 P40_07625 b06c236476f3246633901512e74798fe 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 4.9E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_07625 b06c236476f3246633901512e74798fe 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 4.9E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_07625 b06c236476f3246633901512e74798fe 209 Gene3D G3DSA:1.10.357.10 57 205 1.4E-32 T 13-10-2018 P40_04885 63760e427077ae1c621edecaeaee09a8 382 Gene3D G3DSA:1.20.120.1630 12 150 1.2E-20 T 13-10-2018 P40_04885 63760e427077ae1c621edecaeaee09a8 382 Pfam PF04191 Phospholipid methyltransferase 65 137 1.5E-7 T 13-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 P40_04190 e6fe6a61497a06b0ced3b453efa453c0 177 SUPERFAMILY SSF46785 4 139 9.23E-33 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_04190 e6fe6a61497a06b0ced3b453efa453c0 177 Gene3D G3DSA:1.10.10.10 4 140 8.3E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_04190 e6fe6a61497a06b0ced3b453efa453c0 177 SMART SM00347 24 124 4.8E-27 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_04190 e6fe6a61497a06b0ced3b453efa453c0 177 Pfam PF01047 MarR family 31 89 1.6E-18 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_04190 e6fe6a61497a06b0ced3b453efa453c0 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 7.2E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_04190 e6fe6a61497a06b0ced3b453efa453c0 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 7.2E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_04190 e6fe6a61497a06b0ced3b453efa453c0 177 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 7.2E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 P40_12060 187ceef35fa119717872b0705b78167c 302 Pfam PF12146 Serine aminopeptidase, S33 26 285 9.1E-47 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 P40_12060 187ceef35fa119717872b0705b78167c 302 SUPERFAMILY SSF53474 6 301 2.01E-36 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_12060 187ceef35fa119717872b0705b78167c 302 Gene3D G3DSA:3.40.50.1820 2 301 3.9E-47 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_02730 364161c38ae755334616fd65fafdc7f8 246 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 234 8.1E-78 T 13-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 P40_02730 364161c38ae755334616fd65fafdc7f8 246 Gene3D G3DSA:3.20.20.70 1 240 2.2E-86 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_02730 364161c38ae755334616fd65fafdc7f8 246 Pfam PF00977 Histidine biosynthesis protein 3 231 4.6E-80 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 P40_02730 364161c38ae755334616fd65fafdc7f8 246 SUPERFAMILY SSF51366 1 235 1.65E-76 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 P40_02730 364161c38ae755334616fd65fafdc7f8 246 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 36.023 T 13-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 P40_11515 d01008cf548f14743ecb96d43bcc8c9c 202 SUPERFAMILY SSF47240 5 199 1.16E-77 T 13-10-2018 IPR009078 Ferritin-like superfamily P40_11515 d01008cf548f14743ecb96d43bcc8c9c 202 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 57 196 1.7E-57 T 13-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 P40_11515 d01008cf548f14743ecb96d43bcc8c9c 202 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 5 54 9.3E-15 T 13-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 P40_11515 d01008cf548f14743ecb96d43bcc8c9c 202 Gene3D G3DSA:1.20.1260.10 1 202 3.8E-80 T 13-10-2018 IPR012347 Ferritin-like P40_11515 d01008cf548f14743ecb96d43bcc8c9c 202 PIRSF PIRSF020736 1 201 5.7E-88 T 13-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 P40_08930 6d7ee1c3f8beac6206ed9ca289a8b5b9 200 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 6 194 4.8E-48 T 13-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 P40_08930 6d7ee1c3f8beac6206ed9ca289a8b5b9 200 Pfam PF03358 NADPH-dependent FMN reductase 19 139 1.4E-8 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 P40_08930 6d7ee1c3f8beac6206ed9ca289a8b5b9 200 SUPERFAMILY SSF52218 5 195 1.44E-58 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_08930 6d7ee1c3f8beac6206ed9ca289a8b5b9 200 Gene3D G3DSA:3.40.50.360 2 197 9.2E-64 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_03620 c0086968e8478a9aef9b3f2a42e55863 450 SUPERFAMILY SSF54106 406 448 1.27E-10 T 13-10-2018 P40_03620 c0086968e8478a9aef9b3f2a42e55863 450 SMART SM00257 405 448 2.5E-14 T 13-10-2018 IPR018392 LysM domain P40_03620 c0086968e8478a9aef9b3f2a42e55863 450 SUPERFAMILY SSF53187 161 386 9.42E-49 T 13-10-2018 P40_03620 c0086968e8478a9aef9b3f2a42e55863 450 Gene3D G3DSA:2.60.40.3500 24 139 1.4E-26 T 13-10-2018 P40_03620 c0086968e8478a9aef9b3f2a42e55863 450 Gene3D G3DSA:3.10.350.10 393 450 6.4E-15 T 13-10-2018 IPR036779 LysM domain superfamily P40_03620 c0086968e8478a9aef9b3f2a42e55863 450 Pfam PF11741 AMIN domain 39 137 1.4E-19 T 13-10-2018 IPR021731 AMIN domain P40_03620 c0086968e8478a9aef9b3f2a42e55863 450 Gene3D G3DSA:3.40.630.40 149 392 5.5E-71 T 13-10-2018 P40_03620 c0086968e8478a9aef9b3f2a42e55863 450 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 163 382 1.4E-43 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 P40_03620 c0086968e8478a9aef9b3f2a42e55863 450 SMART SM00646 226 382 8.1E-41 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 P40_03620 c0086968e8478a9aef9b3f2a42e55863 450 Pfam PF01476 LysM domain 406 448 1.7E-13 T 13-10-2018 IPR018392 LysM domain P40_05820 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 7 22 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_05820 11a14165b9f48e49cb97408b9e6b17f1 271 Pfam PF00809 Pterin binding enzyme 8 249 3.6E-71 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_05820 11a14165b9f48e49cb97408b9e6b17f1 271 SUPERFAMILY SSF51717 3 266 2.22E-72 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_05820 11a14165b9f48e49cb97408b9e6b17f1 271 Gene3D G3DSA:3.20.20.20 1 270 1.5E-75 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_05820 11a14165b9f48e49cb97408b9e6b17f1 271 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 7 263 7.8E-75 T 13-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 P40_05820 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 41 54 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_07695 904483b28828610aa5ab8475b7365e61 146 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 16 129 1.9E-13 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 P40_07695 904483b28828610aa5ab8475b7365e61 146 SUPERFAMILY SSF54637 13 130 1.7E-21 T 13-10-2018 IPR029069 HotDog domain superfamily P40_07695 904483b28828610aa5ab8475b7365e61 146 Gene3D G3DSA:3.10.129.10 3 134 6.1E-24 T 13-10-2018 P40_11720 002983c4d618cafe3e1ac224be68ebad 87 Pfam PF00887 Acyl CoA binding protein 4 82 1.1E-26 T 13-10-2018 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 P40_11720 002983c4d618cafe3e1ac224be68ebad 87 ProSitePatterns PS00880 Acyl-CoA-binding (ACB) domain signature. 21 39 - T 13-10-2018 IPR022408 Acyl-CoA-binding protein, ACBP, conserved site P40_11720 002983c4d618cafe3e1ac224be68ebad 87 PRINTS PR00689 Acyl-coA-binding protein signature 65 82 6.1E-22 T 13-10-2018 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 P40_11720 002983c4d618cafe3e1ac224be68ebad 87 PRINTS PR00689 Acyl-coA-binding protein signature 21 39 6.1E-22 T 13-10-2018 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 P40_11720 002983c4d618cafe3e1ac224be68ebad 87 PRINTS PR00689 Acyl-coA-binding protein signature 44 59 6.1E-22 T 13-10-2018 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 P40_11720 002983c4d618cafe3e1ac224be68ebad 87 PRINTS PR00689 Acyl-coA-binding protein signature 4 19 6.1E-22 T 13-10-2018 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 P40_11720 002983c4d618cafe3e1ac224be68ebad 87 SUPERFAMILY SSF47027 3 85 4.58E-28 T 13-10-2018 IPR035984 Acyl-CoA binding protein superfamily GO:0000062 P40_11720 002983c4d618cafe3e1ac224be68ebad 87 Gene3D G3DSA:1.20.80.10 1 87 4.9E-32 T 13-10-2018 IPR014352 FERM/acyl-CoA-binding protein superfamily P40_09135 743db15d2775e34c335e4670a9b1af88 118 Gene3D G3DSA:3.40.30.10 6 118 1.9E-43 T 13-10-2018 P40_09135 743db15d2775e34c335e4670a9b1af88 118 Pfam PF03960 ArsC family 10 116 4.6E-15 T 13-10-2018 IPR006660 Arsenate reductase-like P40_09135 743db15d2775e34c335e4670a9b1af88 118 SUPERFAMILY SSF52833 7 118 8.03E-35 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_09135 743db15d2775e34c335e4670a9b1af88 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 8 116 6.4E-30 T 13-10-2018 IPR006504 Transcriptional regulator Spx/MgsR P40_11360 fa0d51aa7dc92b477fa1d6b17e49265a 365 Pfam PF00425 chorismate binding enzyme 105 357 2.5E-87 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal P40_11360 fa0d51aa7dc92b477fa1d6b17e49265a 365 Gene3D G3DSA:3.60.120.10 66 365 1.1E-113 T 13-10-2018 IPR005801 ADC synthase GO:0009058 P40_11360 fa0d51aa7dc92b477fa1d6b17e49265a 365 PRINTS PR00095 Anthranilate synthase component I signature 205 218 5.1E-12 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 P40_11360 fa0d51aa7dc92b477fa1d6b17e49265a 365 PRINTS PR00095 Anthranilate synthase component I signature 314 328 5.1E-12 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 P40_11360 fa0d51aa7dc92b477fa1d6b17e49265a 365 PRINTS PR00095 Anthranilate synthase component I signature 219 232 5.1E-12 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 P40_11360 fa0d51aa7dc92b477fa1d6b17e49265a 365 PRINTS PR00095 Anthranilate synthase component I signature 299 313 5.1E-12 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 P40_11360 fa0d51aa7dc92b477fa1d6b17e49265a 365 SUPERFAMILY SSF56322 45 365 9.55E-109 T 13-10-2018 IPR005801 ADC synthase GO:0009058 P40_04330 6a11df9aa9141d75ef963ce075db898b 300 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 64 79 - T 13-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 P40_04330 6a11df9aa9141d75ef963ce075db898b 300 SUPERFAMILY SSF53474 58 287 1.22E-51 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_04330 6a11df9aa9141d75ef963ce075db898b 300 Gene3D G3DSA:3.40.50.1820 20 296 1.4E-71 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_04330 6a11df9aa9141d75ef963ce075db898b 300 Pfam PF07859 alpha/beta hydrolase fold 64 262 3.2E-53 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 P40_05680 0218dd101eb3213cce2b4620989ddec9 251 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 2.0E-105 T 13-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 P40_05680 0218dd101eb3213cce2b4620989ddec9 251 Gene3D G3DSA:3.40.50.300 1 247 2.8E-62 T 13-10-2018 P40_05680 0218dd101eb3213cce2b4620989ddec9 251 SUPERFAMILY SSF52540 1 230 2.72E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_05680 0218dd101eb3213cce2b4620989ddec9 251 Pfam PF00005 ABC transporter 17 172 2.3E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_05680 0218dd101eb3213cce2b4620989ddec9 251 SMART SM00382 26 223 7.8E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_19040 886554312c98ce57eaeb418f1cb696f9 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 4.7E-41 T 13-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 P40_19040 886554312c98ce57eaeb418f1cb696f9 117 Pfam PF00576 HIUase/Transthyretin family 4 116 2.8E-36 T 13-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 P40_19040 886554312c98ce57eaeb418f1cb696f9 117 Gene3D G3DSA:2.60.40.180 1 117 2.7E-41 T 13-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 P40_19040 886554312c98ce57eaeb418f1cb696f9 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 13-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 P40_19040 886554312c98ce57eaeb418f1cb696f9 117 SUPERFAMILY SSF49472 1 117 5.49E-41 T 13-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 P40_19040 886554312c98ce57eaeb418f1cb696f9 117 PRINTS PR00189 Transthyretin signature 3 23 6.9E-8 T 13-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 P40_19040 886554312c98ce57eaeb418f1cb696f9 117 PRINTS PR00189 Transthyretin signature 95 117 6.9E-8 T 13-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 P40_10740 421715ab0a4d06dae05652c0c7944fd7 345 Pfam PF01008 Initiation factor 2 subunit family 47 329 2.7E-76 T 13-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 P40_10740 421715ab0a4d06dae05652c0c7944fd7 345 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 33 329 3.5E-111 T 13-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 P40_10740 421715ab0a4d06dae05652c0c7944fd7 345 Gene3D G3DSA:1.20.120.420 2 141 1.1E-41 T 13-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 P40_10740 421715ab0a4d06dae05652c0c7944fd7 345 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 4 340 40.642 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 P40_10740 421715ab0a4d06dae05652c0c7944fd7 345 Gene3D G3DSA:3.40.50.10470 146 337 2.8E-65 T 13-10-2018 P40_10740 421715ab0a4d06dae05652c0c7944fd7 345 SUPERFAMILY SSF100950 7 332 9.07E-112 T 13-10-2018 IPR037171 NagB/RpiA transferase-like P40_10740 421715ab0a4d06dae05652c0c7944fd7 345 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 7 328 4.8E-135 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 P40_11650 5bf8d6fdc41483d9a8945eb01fb9d57b 368 SUPERFAMILY SSF53901 10 212 1.48E-23 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_11650 5bf8d6fdc41483d9a8945eb01fb9d57b 368 PIRSF PIRSF000429 7 366 2.6E-25 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_11650 5bf8d6fdc41483d9a8945eb01fb9d57b 368 Gene3D G3DSA:3.40.47.10 2 367 1.2E-112 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_11650 5bf8d6fdc41483d9a8945eb01fb9d57b 368 Pfam PF02803 Thiolase, C-terminal domain 232 340 2.6E-6 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_11650 5bf8d6fdc41483d9a8945eb01fb9d57b 368 SUPERFAMILY SSF53901 227 357 4.81E-25 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_08165 04aa7e6095463f769d98f90dc77115a5 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 230 1.0E-27 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 P40_08165 04aa7e6095463f769d98f90dc77115a5 318 SUPERFAMILY SSF51735 5 315 7.67E-66 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_08165 04aa7e6095463f769d98f90dc77115a5 318 Gene3D G3DSA:3.40.50.720 5 317 2.7E-61 T 13-10-2018 P40_07430 6e0691e8d6b3c8baf0179cf160a8c36a 286 Gene3D G3DSA:3.40.50.620 1 131 3.6E-21 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_07430 6e0691e8d6b3c8baf0179cf160a8c36a 286 Gene3D G3DSA:3.40.50.620 151 283 1.7E-20 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_07430 6e0691e8d6b3c8baf0179cf160a8c36a 286 SUPERFAMILY SSF52402 1 130 1.44E-22 T 13-10-2018 P40_07430 6e0691e8d6b3c8baf0179cf160a8c36a 286 Pfam PF00582 Universal stress protein family 155 280 1.7E-13 T 13-10-2018 IPR006016 UspA P40_07430 6e0691e8d6b3c8baf0179cf160a8c36a 286 Pfam PF00582 Universal stress protein family 1 129 8.9E-18 T 13-10-2018 IPR006016 UspA P40_07430 6e0691e8d6b3c8baf0179cf160a8c36a 286 PRINTS PR01438 Universal stress protein signature 153 171 6.7E-8 T 13-10-2018 IPR006015 Universal stress protein A P40_07430 6e0691e8d6b3c8baf0179cf160a8c36a 286 PRINTS PR01438 Universal stress protein signature 241 253 6.7E-8 T 13-10-2018 IPR006015 Universal stress protein A P40_07430 6e0691e8d6b3c8baf0179cf160a8c36a 286 PRINTS PR01438 Universal stress protein signature 259 281 6.7E-8 T 13-10-2018 IPR006015 Universal stress protein A P40_07430 6e0691e8d6b3c8baf0179cf160a8c36a 286 SUPERFAMILY SSF52402 154 281 1.67E-17 T 13-10-2018 P40_08095 afc23933514ca0e8e2927b19ee3149aa 309 Pfam PF01966 HD domain 60 135 2.8E-11 T 13-10-2018 IPR006674 HD domain P40_08095 afc23933514ca0e8e2927b19ee3149aa 309 SUPERFAMILY SSF109604 19 248 6.6E-24 T 13-10-2018 P40_08095 afc23933514ca0e8e2927b19ee3149aa 309 Gene3D G3DSA:1.10.3210.10 14 262 1.9E-30 T 13-10-2018 P40_08095 afc23933514ca0e8e2927b19ee3149aa 309 SMART SM00471 56 183 1.4E-4 T 13-10-2018 IPR003607 HD/PDEase domain P40_10420 5db0ecde479e045105bb763fbe40d233 574 Gene3D G3DSA:3.30.300.30 465 570 1.1E-24 T 13-10-2018 P40_10420 5db0ecde479e045105bb763fbe40d233 574 ProSitePatterns PS00455 Putative AMP-binding domain signature. 191 202 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_10420 5db0ecde479e045105bb763fbe40d233 574 Pfam PF13193 AMP-binding enzyme C-terminal domain 480 555 6.5E-12 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_10420 5db0ecde479e045105bb763fbe40d233 574 SUPERFAMILY SSF56801 16 568 2.75E-108 T 13-10-2018 P40_10420 5db0ecde479e045105bb763fbe40d233 574 Pfam PF00501 AMP-binding enzyme 22 471 1.8E-62 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_10420 5db0ecde479e045105bb763fbe40d233 574 Gene3D G3DSA:3.40.50.980 45 207 3.9E-55 T 13-10-2018 P40_10420 5db0ecde479e045105bb763fbe40d233 574 Gene3D G3DSA:3.40.50.980 42 334 3.9E-55 T 13-10-2018 P40_10420 5db0ecde479e045105bb763fbe40d233 574 Gene3D G3DSA:3.40.50.12780 368 463 2.2E-21 T 13-10-2018 P40_17735 77645c61333c6d7cb1cf5db84a03bfa7 305 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 8 299 2.7E-63 T 13-10-2018 IPR005218 Diacylglycerol/lipid kinase P40_17735 77645c61333c6d7cb1cf5db84a03bfa7 305 Pfam PF00781 Diacylglycerol kinase catalytic domain 12 124 1.5E-21 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 P40_17735 77645c61333c6d7cb1cf5db84a03bfa7 305 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 5 305 42.97 T 13-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 P40_17735 77645c61333c6d7cb1cf5db84a03bfa7 305 Gene3D G3DSA:3.40.50.10330 19 293 5.6E-74 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 P40_17735 77645c61333c6d7cb1cf5db84a03bfa7 305 SUPERFAMILY SSF111331 5 302 4.14E-64 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily P40_17735 77645c61333c6d7cb1cf5db84a03bfa7 305 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 5 304 4.1E-134 T 13-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 P40_17735 77645c61333c6d7cb1cf5db84a03bfa7 305 Gene3D G3DSA:2.60.200.40 122 290 5.6E-74 T 13-10-2018 P40_17735 77645c61333c6d7cb1cf5db84a03bfa7 305 SMART SM00046 6 133 4.4E-8 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 P40_06220 2596db21c3dcab9be93e8d2cec293280 205 Gene3D G3DSA:3.40.30.10 34 197 2.0E-27 T 13-10-2018 P40_06220 2596db21c3dcab9be93e8d2cec293280 205 Pfam PF02630 SCO1/SenC 42 172 2.8E-9 T 13-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_06220 2596db21c3dcab9be93e8d2cec293280 205 SUPERFAMILY SSF52833 40 184 9.23E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_06305 9fd93cfa20ed25dffad494077c5e3097 394 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 227 7.2E-22 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_06305 9fd93cfa20ed25dffad494077c5e3097 394 SUPERFAMILY SSF47203 243 390 6.93E-42 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_06305 9fd93cfa20ed25dffad494077c5e3097 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 3.6E-35 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_06305 9fd93cfa20ed25dffad494077c5e3097 394 SUPERFAMILY SSF56645 7 239 8.9E-81 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_06305 9fd93cfa20ed25dffad494077c5e3097 394 Gene3D G3DSA:2.40.110.10 135 239 3.0E-39 T 13-10-2018 P40_06305 9fd93cfa20ed25dffad494077c5e3097 394 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 385 3.0E-27 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_06305 9fd93cfa20ed25dffad494077c5e3097 394 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 345 364 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 P40_06305 9fd93cfa20ed25dffad494077c5e3097 394 Gene3D G3DSA:1.20.140.10 241 394 8.5E-42 T 13-10-2018 P40_06305 9fd93cfa20ed25dffad494077c5e3097 394 Gene3D G3DSA:1.10.540.10 2 134 8.3E-42 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_19370 d0244fb7b9820752615714bfde11914e 732 Pfam PF00270 DEAD/DEAH box helicase 203 359 1.3E-12 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 P40_19370 d0244fb7b9820752615714bfde11914e 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 731 23.381 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 P40_19370 d0244fb7b9820752615714bfde11914e 732 TIGRFAM TIGR00595 priA: primosomal protein N' 220 728 8.9E-169 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 P40_19370 d0244fb7b9820752615714bfde11914e 732 SMART SM00487 195 391 1.8E-17 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_19370 d0244fb7b9820752615714bfde11914e 732 SUPERFAMILY SSF52540 198 375 3.78E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_19370 d0244fb7b9820752615714bfde11914e 732 Gene3D G3DSA:1.10.8.630 4 111 5.4E-34 T 13-10-2018 P40_19370 d0244fb7b9820752615714bfde11914e 732 Gene3D G3DSA:3.40.50.300 190 378 1.3E-72 T 13-10-2018 P40_19370 d0244fb7b9820752615714bfde11914e 732 SUPERFAMILY SSF52540 402 607 1.26E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_19370 d0244fb7b9820752615714bfde11914e 732 SMART SM00490 491 587 7.9E-6 T 13-10-2018 IPR001650 Helicase, C-terminal P40_07400 fb4fe04fad013470ea9e0b889f43a070 149 Pfam PF07681 DoxX 19 104 8.2E-12 T 13-10-2018 IPR032808 DoxX family P40_03020 4880734cd82b86165fce93801a36ff17 456 SUPERFAMILY SSF56112 273 415 5.8E-13 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_03020 4880734cd82b86165fce93801a36ff17 456 SUPERFAMILY SSF56112 41 183 5.88E-17 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_03020 4880734cd82b86165fce93801a36ff17 456 Gene3D G3DSA:1.10.510.10 37 181 1.9E-7 T 13-10-2018 P40_03020 4880734cd82b86165fce93801a36ff17 456 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 281 452 1.1E-11 T 13-10-2018 P40_03020 4880734cd82b86165fce93801a36ff17 456 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 52 193 2.5E-8 T 13-10-2018 P40_13130 f5fdc23430972b9496f01ed88e505424 210 SUPERFAMILY SSF48498 91 189 1.08E-6 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_13130 f5fdc23430972b9496f01ed88e505424 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 1.5E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_13130 f5fdc23430972b9496f01ed88e505424 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 1.5E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_13130 f5fdc23430972b9496f01ed88e505424 210 Gene3D G3DSA:1.10.357.10 12 184 5.6E-29 T 13-10-2018 P40_13130 f5fdc23430972b9496f01ed88e505424 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 5.1E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_13130 f5fdc23430972b9496f01ed88e505424 210 SUPERFAMILY SSF46689 10 83 3.23E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_16615 f6a1ea3dabc5e19b28ed12c06fe67c2d 429 Pfam PF02653 Branched-chain amino acid transport system / permease component 29 296 8.1E-26 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_21125 43c61c31f05f0f7b688b4a1b68f30b63 231 Pfam PF01965 DJ-1/PfpI family 27 185 1.4E-15 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 P40_21125 43c61c31f05f0f7b688b4a1b68f30b63 231 Gene3D G3DSA:3.40.50.880 19 226 2.0E-43 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_21125 43c61c31f05f0f7b688b4a1b68f30b63 231 SUPERFAMILY SSF52317 26 215 7.05E-36 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_21160 48bf6e87db548a00ea8953a5eddb1ae8 273 SUPERFAMILY SSF46689 179 208 3.81E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_21160 48bf6e87db548a00ea8953a5eddb1ae8 273 Gene3D G3DSA:1.10.10.60 173 264 3.8E-24 T 13-10-2018 P40_21160 48bf6e87db548a00ea8953a5eddb1ae8 273 Pfam PF12833 Helix-turn-helix domain 181 260 4.5E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_21160 48bf6e87db548a00ea8953a5eddb1ae8 273 SUPERFAMILY SSF46689 211 262 3.14E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_21160 48bf6e87db548a00ea8953a5eddb1ae8 273 SMART SM00342 174 259 4.9E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_02045 69b52c4d2d5855e012346a963019a8aa 183 Pfam PF09335 SNARE associated Golgi protein 22 139 8.6E-20 T 13-10-2018 IPR032816 SNARE associated Golgi protein P40_11210 bcdf8d61925cb752539606b463dfd4ee 614 Gene3D G3DSA:3.40.50.720 399 504 4.3E-6 T 13-10-2018 P40_11210 bcdf8d61925cb752539606b463dfd4ee 614 Gene3D G3DSA:1.20.1530.20 4 396 3.1E-17 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily P40_11210 bcdf8d61925cb752539606b463dfd4ee 614 SUPERFAMILY SSF51735 401 499 3.64E-6 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_11210 bcdf8d61925cb752539606b463dfd4ee 614 Pfam PF00999 Sodium/hydrogen exchanger family 11 388 1.9E-37 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 P40_13550 2533a9f35679346dfd483bfbb76057f2 202 Pfam PF01713 Smr domain 101 181 1.7E-21 T 13-10-2018 IPR002625 Smr domain P40_13550 2533a9f35679346dfd483bfbb76057f2 202 Gene3D G3DSA:3.30.1370.110 54 187 1.2E-37 T 13-10-2018 P40_13550 2533a9f35679346dfd483bfbb76057f2 202 SUPERFAMILY SSF160443 99 181 6.28E-14 T 13-10-2018 IPR036063 Smr domain superfamily P40_13550 2533a9f35679346dfd483bfbb76057f2 202 SMART SM00463 98 181 2.3E-13 T 13-10-2018 IPR002625 Smr domain P40_06425 d63ca69f6aeef927ef190ca6758e278e 757 Pfam PF06733 DEAD_2 272 389 8.4E-13 T 13-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 P40_06425 d63ca69f6aeef927ef190ca6758e278e 757 Gene3D G3DSA:3.40.50.300 193 545 1.3E-36 T 13-10-2018 P40_06425 d63ca69f6aeef927ef190ca6758e278e 757 SUPERFAMILY SSF52540 195 737 1.62E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_06425 d63ca69f6aeef927ef190ca6758e278e 757 Gene3D G3DSA:3.40.50.300 561 757 2.0E-46 T 13-10-2018 P40_06425 d63ca69f6aeef927ef190ca6758e278e 757 Gene3D G3DSA:1.10.275.40 385 512 1.3E-36 T 13-10-2018 P40_06425 d63ca69f6aeef927ef190ca6758e278e 757 SMART SM00488 175 418 2.2E-4 T 13-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 P40_06425 d63ca69f6aeef927ef190ca6758e278e 757 Gene3D G3DSA:1.10.30.20 270 328 1.3E-36 T 13-10-2018 P40_06425 d63ca69f6aeef927ef190ca6758e278e 757 SMART SM00491 608 743 4.3E-10 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 P40_06425 d63ca69f6aeef927ef190ca6758e278e 757 Pfam PF13307 Helicase C-terminal domain 595 755 3.5E-32 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 P40_13210 f96cf17432db2da470237503766596a0 63 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.896 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_13210 f96cf17432db2da470237503766596a0 63 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 3.7E-21 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_13210 f96cf17432db2da470237503766596a0 63 SUPERFAMILY SSF57829 2 54 1.04E-18 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 P40_13210 f96cf17432db2da470237503766596a0 63 Pfam PF01783 Ribosomal L32p protein family 2 54 1.1E-20 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_19730 bf3aab94307789e2e46fcca3ec15cc7c 599 Pfam PF00501 AMP-binding enzyme 27 445 1.9E-75 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_19730 bf3aab94307789e2e46fcca3ec15cc7c 599 Gene3D G3DSA:3.40.50.12780 17 440 3.1E-81 T 13-10-2018 P40_19730 bf3aab94307789e2e46fcca3ec15cc7c 599 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 531 5.1E-14 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_19730 bf3aab94307789e2e46fcca3ec15cc7c 599 Gene3D G3DSA:3.30.300.30 441 547 5.8E-23 T 13-10-2018 P40_19730 bf3aab94307789e2e46fcca3ec15cc7c 599 SUPERFAMILY SSF56801 21 543 3.01E-116 T 13-10-2018 P40_02450 02675aa5aeec2c413dae4a7d2c26a2ef 430 SUPERFAMILY SSF51905 1 344 3.1E-30 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_02450 02675aa5aeec2c413dae4a7d2c26a2ef 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 2.9E-54 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_02450 02675aa5aeec2c413dae4a7d2c26a2ef 430 Gene3D G3DSA:3.50.50.100 1 406 5.7E-114 T 13-10-2018 P40_02450 02675aa5aeec2c413dae4a7d2c26a2ef 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 5.7E-11 T 13-10-2018 P40_02450 02675aa5aeec2c413dae4a7d2c26a2ef 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.7E-11 T 13-10-2018 P40_02450 02675aa5aeec2c413dae4a7d2c26a2ef 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 113 131 5.7E-11 T 13-10-2018 P40_18125 a7fbee2262693cdebacc08812d8056ab 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 2.8E-48 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18125 a7fbee2262693cdebacc08812d8056ab 128 Pfam PF01196 Ribosomal protein L17 20 116 1.7E-35 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18125 a7fbee2262693cdebacc08812d8056ab 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.945 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18125 a7fbee2262693cdebacc08812d8056ab 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18125 a7fbee2262693cdebacc08812d8056ab 128 Gene3D G3DSA:3.90.1030.10 1 117 6.4E-49 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18125 a7fbee2262693cdebacc08812d8056ab 128 SUPERFAMILY SSF64263 1 119 3.01E-52 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_13115 7bd3c42dd9f0057370cab416d45011f8 113 Pfam PF13806 Rieske-like [2Fe-2S] domain 8 110 1.8E-34 T 13-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 P40_13115 7bd3c42dd9f0057370cab416d45011f8 113 SUPERFAMILY SSF50022 8 112 1.78E-35 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_13115 7bd3c42dd9f0057370cab416d45011f8 113 Gene3D G3DSA:2.102.10.10 4 113 5.1E-35 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_13115 7bd3c42dd9f0057370cab416d45011f8 113 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 8 111 1.1E-33 T 13-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 P40_00745 efefe09b3c2f1f5ad5ea499e792add9e 273 Pfam PF11738 Protein of unknown function (DUF3298) 188 261 8.6E-12 T 13-10-2018 IPR021729 Domain of unknown function DUF3298 P40_00745 efefe09b3c2f1f5ad5ea499e792add9e 273 Gene3D G3DSA:3.30.565.40 48 181 3.8E-26 T 13-10-2018 P40_00745 efefe09b3c2f1f5ad5ea499e792add9e 273 Pfam PF13739 Domain of unknown function (DUF4163) 75 166 1.8E-6 T 13-10-2018 IPR025303 Deacetylase PdaC P40_00745 efefe09b3c2f1f5ad5ea499e792add9e 273 Gene3D G3DSA:3.90.640.20 183 273 3.3E-25 T 13-10-2018 IPR037126 PdaC/RsiV-like superfamily P40_12795 7018fb998b733178eff148775bdc87e4 1045 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1001 1043 2.6E-21 T 13-10-2018 IPR020011 Motility protein FimV, C-terminal P40_12795 7018fb998b733178eff148775bdc87e4 1045 Gene3D G3DSA:1.20.58.2200 983 1044 6.3E-25 T 13-10-2018 IPR038440 FimV, C-terminal domain superfamily P40_12795 7018fb998b733178eff148775bdc87e4 1045 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 249 322 8.9E-29 T 13-10-2018 IPR020012 Motility protein FimV, N-terminal P40_12795 7018fb998b733178eff148775bdc87e4 1045 Gene3D G3DSA:3.10.350.10 232 309 3.7E-5 T 13-10-2018 IPR036779 LysM domain superfamily P40_14380 93a8276e17cedf586d4d6e87853f59fb 166 Gene3D G3DSA:1.10.10.10 22 66 4.4E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14380 93a8276e17cedf586d4d6e87853f59fb 166 Pfam PF02631 RecX family 48 162 6.8E-33 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 P40_14380 93a8276e17cedf586d4d6e87853f59fb 166 Gene3D G3DSA:1.10.10.10 69 113 7.6E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14380 93a8276e17cedf586d4d6e87853f59fb 166 Hamap MF_01114 Regulatory protein RecX [recX]. 13 166 14.413 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 P40_14380 93a8276e17cedf586d4d6e87853f59fb 166 Gene3D G3DSA:1.10.10.10 115 160 1.8E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_09220 5b97ecb4b1bc61f3ecb39ee36d6ee231 381 Pfam PF02684 Lipid-A-disaccharide synthetase 6 361 1.7E-106 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 P40_09220 5b97ecb4b1bc61f3ecb39ee36d6ee231 381 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 5 373 1.0E-112 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 P40_09220 5b97ecb4b1bc61f3ecb39ee36d6ee231 381 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 3 378 39.912 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 P40_09220 5b97ecb4b1bc61f3ecb39ee36d6ee231 381 SUPERFAMILY SSF53756 6 351 2.47E-35 T 13-10-2018 P40_03485 bd32e26836d615b19846e1d2c4243c35 593 Gene3D G3DSA:1.20.58.1700 284 356 1.3E-153 T 13-10-2018 P40_03485 bd32e26836d615b19846e1d2c4243c35 593 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 37 586 9.3E-239 T 13-10-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 P40_03485 bd32e26836d615b19846e1d2c4243c35 593 Pfam PF01425 Amidase 51 426 3.3E-80 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_03485 bd32e26836d615b19846e1d2c4243c35 593 SUPERFAMILY SSF75304 3 435 1.57E-108 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_03485 bd32e26836d615b19846e1d2c4243c35 593 Gene3D G3DSA:3.10.490.10 458 593 1.6E-49 T 13-10-2018 P40_03485 bd32e26836d615b19846e1d2c4243c35 593 Gene3D G3DSA:3.90.1300.10 38 430 1.3E-153 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_04715 632a8ee85ef5428e11376bb70430ef92 370 Gene3D G3DSA:3.20.20.70 5 366 1.9E-102 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_04715 632a8ee85ef5428e11376bb70430ef92 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 356 1.6E-65 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 P40_04715 632a8ee85ef5428e11376bb70430ef92 370 SUPERFAMILY SSF51395 2 360 1.32E-96 T 13-10-2018 P40_19085 680ee5874f9e54631e9e8d3f3aed42df 329 Pfam PF09084 NMT1/THI5 like 39 253 2.8E-43 T 13-10-2018 IPR015168 SsuA/THI5-like P40_19085 680ee5874f9e54631e9e8d3f3aed42df 329 Gene3D G3DSA:3.40.190.10 32 304 6.8E-58 T 13-10-2018 P40_19085 680ee5874f9e54631e9e8d3f3aed42df 329 SUPERFAMILY SSF53850 26 262 2.22E-40 T 13-10-2018 P40_19085 680ee5874f9e54631e9e8d3f3aed42df 329 Gene3D G3DSA:3.40.190.10 109 214 6.8E-58 T 13-10-2018 P40_03860 3e6baf399f88ea3ef4738aa9f60d1d12 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 1.4E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_03860 3e6baf399f88ea3ef4738aa9f60d1d12 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 1.4E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_03860 3e6baf399f88ea3ef4738aa9f60d1d12 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 1.1E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_03860 3e6baf399f88ea3ef4738aa9f60d1d12 211 Gene3D G3DSA:1.10.357.10 21 209 1.7E-43 T 13-10-2018 P40_03860 3e6baf399f88ea3ef4738aa9f60d1d12 211 SUPERFAMILY SSF46689 13 89 1.5E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_10960 7e4ae52d2ff20f32941f05a9e96c3b69 316 SUPERFAMILY SSF144083 251 314 1.28E-21 T 13-10-2018 P40_10960 7e4ae52d2ff20f32941f05a9e96c3b69 316 Pfam PF01544 CorA-like Mg2+ transporter protein 26 312 1.1E-59 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 P40_10960 7e4ae52d2ff20f32941f05a9e96c3b69 316 SUPERFAMILY SSF143865 25 255 3.79E-35 T 13-10-2018 P40_10960 7e4ae52d2ff20f32941f05a9e96c3b69 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 25 316 2.5E-76 T 13-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 P40_10960 7e4ae52d2ff20f32941f05a9e96c3b69 316 Gene3D G3DSA:1.20.58.340 240 316 1.4E-27 T 13-10-2018 P40_05850 bec8ef4d71715f95cfcf2029fef681c1 139 SUPERFAMILY SSF47413 15 78 1.93E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_05850 bec8ef4d71715f95cfcf2029fef681c1 139 Gene3D G3DSA:1.10.260.40 19 91 7.2E-11 T 13-10-2018 P40_05850 bec8ef4d71715f95cfcf2029fef681c1 139 Pfam PF13560 Helix-turn-helix domain 25 79 4.6E-7 T 13-10-2018 P40_20920 d46e392c3d76541bf6c0d307bf6e2fcd 466 SUPERFAMILY SSF52540 5 167 1.73E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_20920 d46e392c3d76541bf6c0d307bf6e2fcd 466 Pfam PF01926 50S ribosome-binding GTPase 7 92 4.7E-12 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 P40_20920 d46e392c3d76541bf6c0d307bf6e2fcd 466 Gene3D G3DSA:3.40.50.300 2 186 4.3E-22 T 13-10-2018 P40_20920 d46e392c3d76541bf6c0d307bf6e2fcd 466 Pfam PF11981 Domain of unknown function (DUF3482) 161 453 1.8E-62 T 13-10-2018 IPR021871 Protein of unknown function DUF3482 P40_19810 9ef157460e7d4ee86a856acd760ebdc2 208 Gene3D G3DSA:1.20.1510.10 73 197 1.7E-7 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_19810 9ef157460e7d4ee86a856acd760ebdc2 208 Gene3D G3DSA:1.20.1510.10 16 72 2.6E-7 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_19810 9ef157460e7d4ee86a856acd760ebdc2 208 SUPERFAMILY SSF161111 15 194 4.45E-36 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_19810 9ef157460e7d4ee86a856acd760ebdc2 208 Pfam PF01545 Cation efflux family 20 194 2.7E-11 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 P40_03260 8c0696a3749960c8037abdb5fd524a91 298 SUPERFAMILY SSF52540 56 204 3.98E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03260 8c0696a3749960c8037abdb5fd524a91 298 SMART SM00382 95 212 5.2E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_03260 8c0696a3749960c8037abdb5fd524a91 298 Gene3D G3DSA:3.40.50.300 67 212 3.5E-11 T 13-10-2018 P40_03260 8c0696a3749960c8037abdb5fd524a91 298 Pfam PF05673 Protein of unknown function (DUF815) 41 296 2.3E-101 T 13-10-2018 IPR008533 Domain of unknown function DUF815 P40_05495 00a2cad524cba438942823d20e5ae4ec 437 SUPERFAMILY SSF53822 34 403 5.18E-47 T 13-10-2018 IPR028082 Periplasmic binding protein-like I P40_05495 00a2cad524cba438942823d20e5ae4ec 437 Gene3D G3DSA:3.40.50.2300 149 290 3.1E-69 T 13-10-2018 P40_05495 00a2cad524cba438942823d20e5ae4ec 437 Gene3D G3DSA:3.40.50.2300 38 362 3.1E-69 T 13-10-2018 P40_05495 00a2cad524cba438942823d20e5ae4ec 437 Pfam PF13458 Periplasmic binding protein 29 397 4.9E-72 T 13-10-2018 IPR028081 Leucine-binding protein domain P40_16265 d657eda541a738bc775a38bba9c5c8f5 110 Gene3D G3DSA:1.10.10.10 2 107 2.1E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_16265 d657eda541a738bc775a38bba9c5c8f5 110 SUPERFAMILY SSF46767 4 86 3.14E-22 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 P40_16265 d657eda541a738bc775a38bba9c5c8f5 110 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 85 5.3E-21 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 P40_20250 ffd6bca062fffaa38a3af48b123a6b4e 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 6.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20250 ffd6bca062fffaa38a3af48b123a6b4e 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20250 ffd6bca062fffaa38a3af48b123a6b4e 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 6.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20250 ffd6bca062fffaa38a3af48b123a6b4e 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 6.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20250 ffd6bca062fffaa38a3af48b123a6b4e 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 6.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20250 ffd6bca062fffaa38a3af48b123a6b4e 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 6.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20250 ffd6bca062fffaa38a3af48b123a6b4e 289 Gene3D G3DSA:3.40.50.720 7 288 2.6E-51 T 13-10-2018 P40_20250 ffd6bca062fffaa38a3af48b123a6b4e 289 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 210 2.9E-4 T 13-10-2018 P40_20250 ffd6bca062fffaa38a3af48b123a6b4e 289 SUPERFAMILY SSF51735 1 247 2.19E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_20250 ffd6bca062fffaa38a3af48b123a6b4e 289 Pfam PF00106 short chain dehydrogenase 7 199 1.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20250 ffd6bca062fffaa38a3af48b123a6b4e 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 3.9E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20250 ffd6bca062fffaa38a3af48b123a6b4e 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 3.9E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20250 ffd6bca062fffaa38a3af48b123a6b4e 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 3.9E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20250 ffd6bca062fffaa38a3af48b123a6b4e 289 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_10765 4130369585aa79fcd33419f6fed301b7 304 Pfam PF06189 5'-nucleotidase 38 298 1.4E-114 T 13-10-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 P40_00130 75715aeb8acd6f3821fb42f934218ec9 456 Gene3D G3DSA:1.25.40.10 77 265 2.6E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_00130 75715aeb8acd6f3821fb42f934218ec9 456 SUPERFAMILY SSF48452 186 245 7.37E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_14810 efa8ff4c3c07fec026e7d6c4dfaa80b9 177 Gene3D G3DSA:2.60.40.420 31 176 1.8E-33 T 13-10-2018 IPR008972 Cupredoxin P40_14810 efa8ff4c3c07fec026e7d6c4dfaa80b9 177 SUPERFAMILY SSF49503 45 175 1.69E-25 T 13-10-2018 IPR008972 Cupredoxin P40_14810 efa8ff4c3c07fec026e7d6c4dfaa80b9 177 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 51 175 5.3E-8 T 13-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 P40_14450 049d6fb75c8598f58d2c6bed613c9c1e 331 Pfam PF16220 Domain of unknown function (DUF4880) 15 55 2.1E-12 T 13-10-2018 IPR032623 FecR, N-terminal P40_14450 049d6fb75c8598f58d2c6bed613c9c1e 331 PIRSF PIRSF018266 2 322 6.8E-78 T 13-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component P40_14450 049d6fb75c8598f58d2c6bed613c9c1e 331 Pfam PF04773 FecR protein 121 210 1.2E-19 T 13-10-2018 IPR006860 FecR protein P40_14450 049d6fb75c8598f58d2c6bed613c9c1e 331 Gene3D G3DSA:2.60.120.1440 110 244 4.2E-14 T 13-10-2018 P40_09520 bb3b884df949ebfec675d162a1b8860f 128 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 127 1.1E-34 T 13-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 P40_09520 bb3b884df949ebfec675d162a1b8860f 128 Gene3D G3DSA:3.40.1260.10 1 128 1.6E-40 T 13-10-2018 IPR027396 DsrEFH-like P40_09520 bb3b884df949ebfec675d162a1b8860f 128 SUPERFAMILY SSF75169 1 127 8.07E-30 T 13-10-2018 IPR027396 DsrEFH-like P40_09520 bb3b884df949ebfec675d162a1b8860f 128 Pfam PF02635 DsrE/DsrF-like family 1 127 7.5E-19 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein P40_02100 f989753658845924c08626cf5c810093 204 Pfam PF01810 LysE type translocator 15 199 4.6E-31 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 P40_09560 4f255a01010ad119bc9214f8748a8a12 303 SMART SM00342 214 296 1.2E-27 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_09560 4f255a01010ad119bc9214f8748a8a12 303 SUPERFAMILY SSF46689 249 296 1.3E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_09560 4f255a01010ad119bc9214f8748a8a12 303 Gene3D G3DSA:1.10.10.60 196 302 3.3E-25 T 13-10-2018 P40_09560 4f255a01010ad119bc9214f8748a8a12 303 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 2 164 2.9E-29 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal P40_09560 4f255a01010ad119bc9214f8748a8a12 303 Pfam PF12833 Helix-turn-helix domain 220 296 1.4E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_16665 41ad19083bea761ad08b6c24b0af03f5 290 Gene3D G3DSA:1.20.120.920 80 287 1.1E-62 T 13-10-2018 P40_16665 41ad19083bea761ad08b6c24b0af03f5 290 Pfam PF01867 CRISPR associated protein Cas1 23 237 1.6E-11 T 13-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 P40_16665 41ad19083bea761ad08b6c24b0af03f5 290 TIGRFAM TIGR03637 cas1_YPEST: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST 18 283 2.1E-129 T 13-10-2018 IPR019857 CRISPR-associated protein Cas1, YPEST subtype GO:0004520|GO:0043571|GO:0046872 P40_16665 41ad19083bea761ad08b6c24b0af03f5 290 Gene3D G3DSA:3.100.10.20 5 79 5.1E-27 T 13-10-2018 P40_16665 41ad19083bea761ad08b6c24b0af03f5 290 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 19 277 7.7E-56 T 13-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 P40_12200 55feab41a73457470732b97a88603ab5 266 SUPERFAMILY SSF110296 15 264 1.7E-30 T 13-10-2018 P40_12200 55feab41a73457470732b97a88603ab5 266 Gene3D G3DSA:2.130.10.10 6 177 4.3E-17 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_12200 55feab41a73457470732b97a88603ab5 266 Gene3D G3DSA:2.130.10.10 180 265 3.2E-8 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_01250 c1fa22094c300276ddb07e5152a1a918 275 SUPERFAMILY SSF51730 3 274 1.47E-91 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like P40_01250 c1fa22094c300276ddb07e5152a1a918 275 Pfam PF02219 Methylenetetrahydrofolate reductase 3 274 1.5E-88 T 13-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 P40_01250 c1fa22094c300276ddb07e5152a1a918 275 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 4 273 8.6E-95 T 13-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 P40_01250 c1fa22094c300276ddb07e5152a1a918 275 Gene3D G3DSA:3.20.20.220 1 275 7.4E-94 T 13-10-2018 P40_08790 68ea0a9940f666aedfcad06f740a2ad6 206 PIRSF PIRSF006102 1 206 1.6E-60 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 P40_08790 68ea0a9940f666aedfcad06f740a2ad6 206 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 2 206 29.165 T 13-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 P40_08790 68ea0a9940f666aedfcad06f740a2ad6 206 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 204 2.5E-57 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 P40_08790 68ea0a9940f666aedfcad06f740a2ad6 206 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 3 205 2.2E-101 T 13-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 P40_19740 6c65dcd3758d1bcd1f6ee8f549d27bb5 647 SUPERFAMILY SSF63829 324 618 1.44E-10 T 13-10-2018 P40_19740 6c65dcd3758d1bcd1f6ee8f549d27bb5 647 Pfam PF05787 Bacterial protein of unknown function (DUF839) 62 618 7.7E-170 T 13-10-2018 IPR008557 Protein of unknown function DUF839 P40_19740 6c65dcd3758d1bcd1f6ee8f549d27bb5 647 Gene3D G3DSA:2.120.10.30 496 646 5.6E-7 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_09265 d5790246982dcc01169d7d9c60fc9445 230 SUPERFAMILY SSF53448 2 218 4.8E-52 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_09265 d5790246982dcc01169d7d9c60fc9445 230 Gene3D G3DSA:3.90.550.10 1 222 2.1E-67 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P40_09265 d5790246982dcc01169d7d9c60fc9445 230 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2 219 6.3E-63 T 13-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 P40_09265 d5790246982dcc01169d7d9c60fc9445 230 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3 216 4.1E-63 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 P40_09265 d5790246982dcc01169d7d9c60fc9445 230 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 1 217 39.228 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 P40_16525 b5c166768a58729c2daf34dd08926ab5 516 Pfam PF13193 AMP-binding enzyme C-terminal domain 430 505 3.7E-20 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_16525 b5c166768a58729c2daf34dd08926ab5 516 Gene3D G3DSA:3.30.300.30 415 516 4.3E-31 T 13-10-2018 P40_16525 b5c166768a58729c2daf34dd08926ab5 516 ProSitePatterns PS00455 Putative AMP-binding domain signature. 170 181 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_16525 b5c166768a58729c2daf34dd08926ab5 516 Pfam PF00501 AMP-binding enzyme 17 421 3.5E-94 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_16525 b5c166768a58729c2daf34dd08926ab5 516 SUPERFAMILY SSF56801 5 515 9.81E-152 T 13-10-2018 P40_16525 b5c166768a58729c2daf34dd08926ab5 516 Gene3D G3DSA:3.40.50.12780 4 414 7.9E-111 T 13-10-2018 P40_01110 0946c8c362cf68f6384b3b5ad60b6449 385 Pfam PF00561 alpha/beta hydrolase fold 51 359 4.1E-32 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_01110 0946c8c362cf68f6384b3b5ad60b6449 385 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 22 369 2.3E-140 T 13-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 P40_01110 0946c8c362cf68f6384b3b5ad60b6449 385 Gene3D G3DSA:3.40.50.1820 26 361 8.6E-142 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_01110 0946c8c362cf68f6384b3b5ad60b6449 385 PIRSF PIRSF000443 3 383 1.5E-134 T 13-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 P40_01110 0946c8c362cf68f6384b3b5ad60b6449 385 SUPERFAMILY SSF53474 14 374 8.94E-106 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_01110 0946c8c362cf68f6384b3b5ad60b6449 385 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 13 374 29.977 T 13-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 P40_01110 0946c8c362cf68f6384b3b5ad60b6449 385 Gene3D G3DSA:1.10.1740.110 187 292 8.6E-142 T 13-10-2018 P40_11475 200c62e47f99606d08517028ffa8ea78 290 Gene3D G3DSA:2.40.50.100 49 116 1.8E-8 T 13-10-2018 P40_11475 200c62e47f99606d08517028ffa8ea78 290 Gene3D G3DSA:2.40.30.170 170 289 1.1E-29 T 13-10-2018 P40_11475 200c62e47f99606d08517028ffa8ea78 290 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 231 2.1E-16 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain P40_11475 200c62e47f99606d08517028ffa8ea78 290 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 228 2.4E-32 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 P40_11475 200c62e47f99606d08517028ffa8ea78 290 SUPERFAMILY SSF111369 49 208 3.14E-22 T 13-10-2018 P40_11100 745e258b9216194e5e7e71be7dc752ff 303 Pfam PF00892 EamA-like transporter family 160 294 2.7E-16 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_11100 745e258b9216194e5e7e71be7dc752ff 303 SUPERFAMILY SSF103481 199 298 1.57E-16 T 13-10-2018 P40_11100 745e258b9216194e5e7e71be7dc752ff 303 SUPERFAMILY SSF103481 44 152 1.96E-6 T 13-10-2018 P40_00870 65ea9f4e9663a091e1533f6f9f99c9df 95 SUPERFAMILY SSF47413 7 65 5.63E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_00870 65ea9f4e9663a091e1533f6f9f99c9df 95 Pfam PF13560 Helix-turn-helix domain 13 71 4.0E-9 T 13-10-2018 P40_00870 65ea9f4e9663a091e1533f6f9f99c9df 95 Gene3D G3DSA:1.10.260.40 2 84 4.4E-9 T 13-10-2018 P40_20730 7f027a3c0214ef406fe4b94650850991 141 Pfam PF00571 CBS domain 73 128 4.5E-11 T 13-10-2018 IPR000644 CBS domain P40_20730 7f027a3c0214ef406fe4b94650850991 141 Pfam PF00571 CBS domain 6 60 8.4E-10 T 13-10-2018 IPR000644 CBS domain P40_20730 7f027a3c0214ef406fe4b94650850991 141 Gene3D G3DSA:3.10.580.10 1 129 1.0E-29 T 13-10-2018 P40_20730 7f027a3c0214ef406fe4b94650850991 141 SMART SM00116 13 61 7.9E-4 T 13-10-2018 IPR000644 CBS domain P40_20730 7f027a3c0214ef406fe4b94650850991 141 SMART SM00116 80 128 1.3E-4 T 13-10-2018 IPR000644 CBS domain P40_20730 7f027a3c0214ef406fe4b94650850991 141 SUPERFAMILY SSF54631 2 129 2.15E-31 T 13-10-2018 P40_21450 d417fb580a62c4b89decd9b81679f9df 665 Gene3D G3DSA:3.90.780.10 435 613 3.0E-52 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_21450 d417fb580a62c4b89decd9b81679f9df 665 Gene3D G3DSA:3.60.21.10 27 375 8.0E-117 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like P40_21450 d417fb580a62c4b89decd9b81679f9df 665 PRINTS PR01607 Apyrase family signature 553 572 5.7E-27 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_21450 d417fb580a62c4b89decd9b81679f9df 665 PRINTS PR01607 Apyrase family signature 264 287 5.7E-27 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_21450 d417fb580a62c4b89decd9b81679f9df 665 PRINTS PR01607 Apyrase family signature 234 251 5.7E-27 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_21450 d417fb580a62c4b89decd9b81679f9df 665 PRINTS PR01607 Apyrase family signature 304 324 5.7E-27 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_21450 d417fb580a62c4b89decd9b81679f9df 665 PRINTS PR01607 Apyrase family signature 32 50 5.7E-27 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_21450 d417fb580a62c4b89decd9b81679f9df 665 PRINTS PR01607 Apyrase family signature 452 475 5.7E-27 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_21450 d417fb580a62c4b89decd9b81679f9df 665 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_21450 d417fb580a62c4b89decd9b81679f9df 665 Pfam PF00149 Calcineurin-like phosphoesterase 35 281 1.3E-9 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 P40_21450 d417fb580a62c4b89decd9b81679f9df 665 SUPERFAMILY SSF55816 376 616 7.32E-40 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_21450 d417fb580a62c4b89decd9b81679f9df 665 Pfam PF02872 5'-nucleotidase, C-terminal domain 376 573 3.0E-21 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 P40_21450 d417fb580a62c4b89decd9b81679f9df 665 SUPERFAMILY SSF56300 30 375 4.85E-80 T 13-10-2018 P40_09015 819547a2c1f9e7e28aa8c979150634d0 412 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 361 2.4E-35 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_10260 f52cf819bbc227a7e6dc1ef30cf041c8 148 Pfam PF00436 Single-strand binding protein family 6 106 7.2E-15 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 P40_10260 f52cf819bbc227a7e6dc1ef30cf041c8 148 PIRSF PIRSF002070 1 147 1.1E-16 T 13-10-2018 P40_10260 f52cf819bbc227a7e6dc1ef30cf041c8 148 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 9 138 1.3E-15 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 P40_10260 f52cf819bbc227a7e6dc1ef30cf041c8 148 SUPERFAMILY SSF50249 4 132 1.47E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_10260 f52cf819bbc227a7e6dc1ef30cf041c8 148 Gene3D G3DSA:2.40.50.140 3 144 1.6E-25 T 13-10-2018 P40_10465 70e4248a8202ebe186b48478aa54abaa 419 SUPERFAMILY SSF103473 8 406 6.8E-56 T 13-10-2018 IPR036259 MFS transporter superfamily P40_10465 70e4248a8202ebe186b48478aa54abaa 419 Gene3D G3DSA:1.20.1250.20 10 201 2.4E-23 T 13-10-2018 P40_10465 70e4248a8202ebe186b48478aa54abaa 419 Gene3D G3DSA:1.20.1250.20 223 413 7.6E-20 T 13-10-2018 P40_10465 70e4248a8202ebe186b48478aa54abaa 419 Pfam PF07690 Major Facilitator Superfamily 22 207 5.0E-24 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_10465 70e4248a8202ebe186b48478aa54abaa 419 Pfam PF07690 Major Facilitator Superfamily 235 403 2.5E-15 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_09840 fe23b25882fcc0edd6422018dc04386b 546 Gene3D G3DSA:3.40.50.12780 1 437 3.7E-128 T 13-10-2018 P40_09840 fe23b25882fcc0edd6422018dc04386b 546 Pfam PF00501 AMP-binding enzyme 18 442 1.2E-94 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_09840 fe23b25882fcc0edd6422018dc04386b 546 Gene3D G3DSA:3.30.300.310 438 541 2.5E-31 T 13-10-2018 P40_09840 fe23b25882fcc0edd6422018dc04386b 546 SUPERFAMILY SSF56801 8 539 5.1E-138 T 13-10-2018 P40_09840 fe23b25882fcc0edd6422018dc04386b 546 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 526 6.3E-14 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_09840 fe23b25882fcc0edd6422018dc04386b 546 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_04270 e24059ac52e4721c2b6b91d219555264 291 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 25 146 6.7E-8 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 P40_04270 e24059ac52e4721c2b6b91d219555264 291 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 152 282 9.4E-6 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 P40_04270 e24059ac52e4721c2b6b91d219555264 291 SUPERFAMILY SSF55620 2 151 6.67E-24 T 13-10-2018 P40_04270 e24059ac52e4721c2b6b91d219555264 291 Gene3D G3DSA:3.30.479.10 13 153 3.1E-19 T 13-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 P40_04270 e24059ac52e4721c2b6b91d219555264 291 SUPERFAMILY SSF55620 152 283 3.17E-26 T 13-10-2018 P40_01430 a6a101a62ef344622820314168920442 249 Gene3D G3DSA:3.40.50.1010 1 146 6.6E-20 T 13-10-2018 P40_01430 a6a101a62ef344622820314168920442 249 Pfam PF01936 NYN domain 9 142 2.5E-33 T 13-10-2018 IPR021139 NYN domain, limkain-b1-type P40_01430 a6a101a62ef344622820314168920442 249 Gene3D G3DSA:1.10.10.1880 173 244 5.4E-18 T 13-10-2018 P40_01430 a6a101a62ef344622820314168920442 249 Pfam PF12872 OST-HTH/LOTUS domain 165 233 2.1E-9 T 13-10-2018 IPR025605 OST-HTH/LOTUS domain P40_04670 aa14094f7183106df4345f4820f97278 325 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 316 3.2E-101 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 P40_04670 aa14094f7183106df4345f4820f97278 325 Gene3D G3DSA:3.40.718.10 2 324 2.3E-114 T 13-10-2018 P40_04670 aa14094f7183106df4345f4820f97278 325 SUPERFAMILY SSF53659 4 323 5.58E-100 T 13-10-2018 P40_04670 aa14094f7183106df4345f4820f97278 325 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 319 1.1E-120 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 P40_04670 aa14094f7183106df4345f4820f97278 325 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 323 35.018 T 13-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 P40_01120 970598cf74a149ce9e38d21c7eb871f0 189 Pfam PF13505 Outer membrane protein beta-barrel domain 2 189 5.5E-16 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel P40_01120 970598cf74a149ce9e38d21c7eb871f0 189 SUPERFAMILY SSF56925 49 189 7.06E-16 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P40_01120 970598cf74a149ce9e38d21c7eb871f0 189 Gene3D G3DSA:2.40.160.20 16 189 1.8E-20 T 13-10-2018 P40_01560 6939f53ddd5da649462a8b41cd531fe0 64 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 1 47 3.0E-18 T 13-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB P40_02945 49e0cd11629c79a777e53aeddf24c202 538 SUPERFAMILY SSF56112 92 433 4.29E-25 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_02945 49e0cd11629c79a777e53aeddf24c202 538 Pfam PF03109 ABC1 family 111 228 1.4E-30 T 13-10-2018 IPR004147 UbiB domain P40_12770 e6c155b66d943144a357ec016e3da54b 290 Gene3D G3DSA:3.90.226.10 28 288 1.1E-87 T 13-10-2018 P40_12770 e6c155b66d943144a357ec016e3da54b 290 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 13 285 3.0E-131 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_12770 e6c155b66d943144a357ec016e3da54b 290 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 284 39.344 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_12770 e6c155b66d943144a357ec016e3da54b 290 Pfam PF01039 Carboxyl transferase domain 105 242 4.8E-14 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 P40_12770 e6c155b66d943144a357ec016e3da54b 290 SUPERFAMILY SSF52096 28 285 4.66E-89 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_12770 e6c155b66d943144a357ec016e3da54b 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 132 146 2.1E-39 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_12770 e6c155b66d943144a357ec016e3da54b 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 203 220 2.1E-39 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_12770 e6c155b66d943144a357ec016e3da54b 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 254 263 2.1E-39 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_12770 e6c155b66d943144a357ec016e3da54b 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 166 184 2.1E-39 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_12770 e6c155b66d943144a357ec016e3da54b 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 232 243 2.1E-39 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 P40_06260 37b8c7d173cc76305f85da98b259eb38 213 Pfam PF02525 Flavodoxin-like fold 3 200 1.6E-34 T 13-10-2018 IPR003680 Flavodoxin-like fold P40_06260 37b8c7d173cc76305f85da98b259eb38 213 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 212 25.785 T 13-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 P40_06260 37b8c7d173cc76305f85da98b259eb38 213 SUPERFAMILY SSF52218 1 209 5.03E-40 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_06260 37b8c7d173cc76305f85da98b259eb38 213 Gene3D G3DSA:3.40.50.360 1 210 2.9E-46 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_06315 3e7c31c7ace0bac56ffdb403dcc3d69f 122 Gene3D G3DSA:3.30.70.1060 1 116 4.8E-41 T 13-10-2018 P40_06315 3e7c31c7ace0bac56ffdb403dcc3d69f 122 Pfam PF03795 YCII-related domain 1 114 1.7E-23 T 13-10-2018 IPR005545 YCII-related P40_06315 3e7c31c7ace0bac56ffdb403dcc3d69f 122 SUPERFAMILY SSF54909 1 114 1.66E-32 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_06750 9a896f673afe857a808fd05eb419156a 295 SUPERFAMILY SSF54637 64 168 6.07E-7 T 13-10-2018 IPR029069 HotDog domain superfamily P40_06750 9a896f673afe857a808fd05eb419156a 295 Pfam PF01575 MaoC like domain 171 268 3.9E-13 T 13-10-2018 IPR002539 MaoC-like dehydratase domain P40_06750 9a896f673afe857a808fd05eb419156a 295 Gene3D G3DSA:3.10.129.10 36 293 7.4E-72 T 13-10-2018 P40_06750 9a896f673afe857a808fd05eb419156a 295 SUPERFAMILY SSF54637 184 290 3.13E-21 T 13-10-2018 IPR029069 HotDog domain superfamily P40_18405 9f5c8d8b9da4aa11971fe3c885448624 440 Gene3D G3DSA:3.10.450.350 173 414 2.3E-90 T 13-10-2018 P40_18405 9f5c8d8b9da4aa11971fe3c885448624 440 Pfam PF04225 Opacity-associated protein A LysM-like domain 72 155 8.7E-7 T 13-10-2018 IPR007340 Opacity-associated protein A P40_18405 9f5c8d8b9da4aa11971fe3c885448624 440 SUPERFAMILY SSF51261 148 396 6.28E-74 T 13-10-2018 IPR011055 Duplicated hybrid motif P40_18405 9f5c8d8b9da4aa11971fe3c885448624 440 Pfam PF01551 Peptidase family M23 299 395 2.7E-32 T 13-10-2018 IPR016047 Peptidase M23 P40_18405 9f5c8d8b9da4aa11971fe3c885448624 440 Gene3D G3DSA:2.70.70.10 270 401 2.3E-90 T 13-10-2018 IPR011055 Duplicated hybrid motif P40_18405 9f5c8d8b9da4aa11971fe3c885448624 440 Gene3D G3DSA:3.10.450.350 66 156 1.2E-14 T 13-10-2018 P40_15500 92b404bd171a57177fec620b007b7d61 357 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_15500 92b404bd171a57177fec620b007b7d61 357 Pfam PF00005 ABC transporter 42 193 2.7E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_15500 92b404bd171a57177fec620b007b7d61 357 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 243 333 2.7E-27 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 P40_15500 92b404bd171a57177fec620b007b7d61 357 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 313 6.5E-16 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 P40_15500 92b404bd171a57177fec620b007b7d61 357 SMART SM00382 50 243 3.1E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_15500 92b404bd171a57177fec620b007b7d61 357 Gene3D G3DSA:3.40.50.300 12 349 3.5E-104 T 13-10-2018 P40_15500 92b404bd171a57177fec620b007b7d61 357 SUPERFAMILY SSF52540 30 265 2.35E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_21075 8f31ecf7a669661df673a9c4d79e7883 97 Gene3D G3DSA:1.10.260.40 1 96 9.3E-31 T 13-10-2018 P40_21075 8f31ecf7a669661df673a9c4d79e7883 97 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 83 1.4E-32 T 13-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 P40_21075 8f31ecf7a669661df673a9c4d79e7883 97 SUPERFAMILY SSF47413 8 90 3.9E-26 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_21075 8f31ecf7a669661df673a9c4d79e7883 97 Pfam PF01381 Helix-turn-helix 17 66 4.6E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_21075 8f31ecf7a669661df673a9c4d79e7883 97 SMART SM00530 12 68 8.0E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_04335 1d80f0bc170cb3249111b8499e1cb73c 152 Gene3D G3DSA:2.60.40.1820 13 148 1.1E-14 T 13-10-2018 P40_04335 1d80f0bc170cb3249111b8499e1cb73c 152 Pfam PF03168 Late embryogenesis abundant protein 47 132 1.7E-15 T 13-10-2018 IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup P40_04335 1d80f0bc170cb3249111b8499e1cb73c 152 SMART SM00769 26 145 7.6E-6 T 13-10-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 P40_04335 1d80f0bc170cb3249111b8499e1cb73c 152 SUPERFAMILY SSF117070 4 146 3.4E-29 T 13-10-2018 P40_18495 1619605035c717393140ea1bd458d859 372 SUPERFAMILY SSF53383 6 370 2.76E-103 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P40_18495 1619605035c717393140ea1bd458d859 372 Pfam PF00155 Aminotransferase class I and II 16 365 4.0E-54 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P40_18495 1619605035c717393140ea1bd458d859 372 Gene3D G3DSA:3.40.640.10 1 372 5.7E-119 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P40_18495 1619605035c717393140ea1bd458d859 372 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 214 227 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 P40_10845 7cd6c595d0d05e968b6ec16b4139fe89 261 Pfam PF01435 Peptidase family M48 57 239 1.8E-42 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 P40_10845 7cd6c595d0d05e968b6ec16b4139fe89 261 Gene3D G3DSA:3.30.2010.10 48 136 3.5E-7 T 13-10-2018 P40_00780 433106f5b93a7a95af2eea840705e1bb 609 Pfam PF00135 Carboxylesterase family 38 547 3.3E-87 T 13-10-2018 IPR002018 Carboxylesterase, type B P40_00780 433106f5b93a7a95af2eea840705e1bb 609 Gene3D G3DSA:3.40.50.1820 31 579 7.7E-112 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_00780 433106f5b93a7a95af2eea840705e1bb 609 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 120 130 - T 13-10-2018 IPR019819 Carboxylesterase type B, conserved site P40_00780 433106f5b93a7a95af2eea840705e1bb 609 SUPERFAMILY SSF53474 39 560 6.39E-93 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_00780 433106f5b93a7a95af2eea840705e1bb 609 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 223 238 - T 13-10-2018 IPR019826 Carboxylesterase type B, active site P40_10975 13a0179f6e99707e51d11b2468a01397 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 34.272 T 13-10-2018 IPR005583 Peroxide stress protein YaaA P40_10975 13a0179f6e99707e51d11b2468a01397 259 Pfam PF03883 Peroxide stress protein YaaA 1 243 2.0E-88 T 13-10-2018 IPR005583 Peroxide stress protein YaaA P40_18065 b033a3426d432217656ab99b4e3c451e 288 SUPERFAMILY SSF50156 207 287 1.58E-12 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 P40_18065 b033a3426d432217656ab99b4e3c451e 288 Gene3D G3DSA:2.30.42.10 191 286 5.4E-15 T 13-10-2018 P40_18065 b033a3426d432217656ab99b4e3c451e 288 Gene3D G3DSA:2.30.30.830 97 164 4.1E-17 T 13-10-2018 P40_18065 b033a3426d432217656ab99b4e3c451e 288 Pfam PF11356 Type II secretion system protein C 23 163 3.4E-39 T 13-10-2018 IPR024961 Type II secretion system protein C, N-terminal P40_17825 ebbc9198afaa78e729ef7c0f8b9b0330 248 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 25 245 1.6E-62 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase P40_17825 ebbc9198afaa78e729ef7c0f8b9b0330 248 SUPERFAMILY SSF64438 5 247 3.48E-73 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic P40_17825 ebbc9198afaa78e729ef7c0f8b9b0330 248 Gene3D G3DSA:3.60.140.10 2 248 1.7E-76 T 13-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily P40_17825 ebbc9198afaa78e729ef7c0f8b9b0330 248 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 34 246 7.4E-52 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase P40_14920 73bc507de02f7d482be53a3d9ba125b2 102 Gene3D G3DSA:1.10.10.60 8 92 3.4E-10 T 13-10-2018 P40_14920 73bc507de02f7d482be53a3d9ba125b2 102 Pfam PF01527 Transposase 1 76 8.2E-14 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 P40_14920 73bc507de02f7d482be53a3d9ba125b2 102 SUPERFAMILY SSF46689 3 95 8.78E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_04365 6eac6ba521e438c0ccd4d7267d132cf3 598 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 1.7E-16 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_04365 6eac6ba521e438c0ccd4d7267d132cf3 598 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 1.2E-11 T 13-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria P40_04365 6eac6ba521e438c0ccd4d7267d132cf3 598 SUPERFAMILY SSF56645 38 278 2.36E-60 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_04365 6eac6ba521e438c0ccd4d7267d132cf3 598 Gene3D G3DSA:1.20.140.10 286 455 2.9E-41 T 13-10-2018 P40_04365 6eac6ba521e438c0ccd4d7267d132cf3 598 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 157 3.5E-16 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 P40_04365 6eac6ba521e438c0ccd4d7267d132cf3 598 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 450 1.5E-18 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_04365 6eac6ba521e438c0ccd4d7267d132cf3 598 SUPERFAMILY SSF47203 286 474 2.26E-47 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_04365 6eac6ba521e438c0ccd4d7267d132cf3 598 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 467 592 6.2E-37 T 13-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain P40_04365 6eac6ba521e438c0ccd4d7267d132cf3 598 Gene3D G3DSA:2.40.110.10 160 285 9.6E-28 T 13-10-2018 P40_04365 6eac6ba521e438c0ccd4d7267d132cf3 598 Gene3D G3DSA:1.10.540.10 21 159 2.6E-20 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_05550 95f68d1beadd2f77fb4b83228beb0d45 348 Pfam PF13379 NMT1-like family 53 256 1.2E-5 T 13-10-2018 P40_05550 95f68d1beadd2f77fb4b83228beb0d45 348 Gene3D G3DSA:3.40.190.10 113 209 9.7E-25 T 13-10-2018 P40_05550 95f68d1beadd2f77fb4b83228beb0d45 348 Gene3D G3DSA:1.10.8.450 247 279 9.7E-25 T 13-10-2018 P40_05550 95f68d1beadd2f77fb4b83228beb0d45 348 TIGRFAM TIGR03427 ABC_peri_uca: ABC transporter periplasmic binding protein, urea carboxylase region 27 348 7.6E-160 T 13-10-2018 IPR017793 ABC transporter, urea utilisation-associated, substrate-binding protein P40_05550 95f68d1beadd2f77fb4b83228beb0d45 348 SUPERFAMILY SSF53850 35 240 5.77E-32 T 13-10-2018 P40_05550 95f68d1beadd2f77fb4b83228beb0d45 348 Gene3D G3DSA:3.40.190.10 49 306 9.7E-25 T 13-10-2018 P40_19865 2aa7b96cd26ef67114d65dcce7658e13 409 Pfam PF02321 Outer membrane efflux protein 222 386 3.2E-15 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_19865 2aa7b96cd26ef67114d65dcce7658e13 409 Pfam PF02321 Outer membrane efflux protein 36 192 3.9E-8 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_19865 2aa7b96cd26ef67114d65dcce7658e13 409 Gene3D G3DSA:1.20.1600.10 26 391 4.6E-33 T 13-10-2018 P40_19865 2aa7b96cd26ef67114d65dcce7658e13 409 SUPERFAMILY SSF56954 3 388 6.54E-39 T 13-10-2018 P40_17785 a2055e8a32c84aa4959c1babf21eb16f 545 SUPERFAMILY SSF56801 15 541 5.36E-147 T 13-10-2018 P40_17785 a2055e8a32c84aa4959c1babf21eb16f 545 Gene3D G3DSA:3.30.300.310 442 543 8.4E-25 T 13-10-2018 P40_17785 a2055e8a32c84aa4959c1babf21eb16f 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 530 4.6E-16 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_17785 a2055e8a32c84aa4959c1babf21eb16f 545 Pfam PF00501 AMP-binding enzyme 25 444 3.4E-106 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_17785 a2055e8a32c84aa4959c1babf21eb16f 545 Gene3D G3DSA:3.40.50.12780 7 441 9.2E-121 T 13-10-2018 P40_17785 a2055e8a32c84aa4959c1babf21eb16f 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_21065 af39b9818fa7cd1e58f3f14636a32959 161 Gene3D G3DSA:3.30.70.860 3 160 2.7E-55 T 13-10-2018 IPR035571 UPF0234-like, C-terminal P40_21065 af39b9818fa7cd1e58f3f14636a32959 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 27.176 T 13-10-2018 IPR007551 Protein of unknown function DUF520 P40_21065 af39b9818fa7cd1e58f3f14636a32959 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 1.3E-60 T 13-10-2018 IPR007551 Protein of unknown function DUF520 P40_21065 af39b9818fa7cd1e58f3f14636a32959 161 Gene3D G3DSA:3.30.70.990 9 98 2.7E-55 T 13-10-2018 IPR035570 UPF0234, N-terminal P40_21065 af39b9818fa7cd1e58f3f14636a32959 161 SUPERFAMILY SSF89963 89 161 4.45E-30 T 13-10-2018 IPR036183 YajQ-like superfamily P40_21065 af39b9818fa7cd1e58f3f14636a32959 161 SUPERFAMILY SSF89963 2 87 3.4E-23 T 13-10-2018 IPR036183 YajQ-like superfamily P40_01205 eb658ce58aaff3f70420da1241a7480c 418 Gene3D G3DSA:1.10.4160.10 6 414 9.7E-36 T 13-10-2018 IPR038271 Purine-cytosine permease superfamily P40_01205 eb658ce58aaff3f70420da1241a7480c 418 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 12 361 4.4E-24 T 13-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 P40_14075 0b2e5544bbbf45e672bd3233b443e186 444 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 65 441 9.5E-93 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_14075 0b2e5544bbbf45e672bd3233b443e186 444 PIRSF PIRSF006066 5 444 1.2E-85 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_14075 0b2e5544bbbf45e672bd3233b443e186 444 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 435 2.1E-89 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_07155 92e645629ea3f40cb3540c7078a07d11 275 Pfam PF00665 Integrase core domain 109 225 3.0E-26 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 P40_07155 92e645629ea3f40cb3540c7078a07d11 275 Gene3D G3DSA:3.30.420.10 106 257 2.8E-12 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_07155 92e645629ea3f40cb3540c7078a07d11 275 SUPERFAMILY SSF53098 102 268 6.07E-36 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_06420 d92f2b28af3444b01fa828a172b6a266 558 Gene3D G3DSA:3.40.1350.10 494 554 2.0E-8 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 P40_06420 d92f2b28af3444b01fa828a172b6a266 558 SMART SM00990 440 554 2.8E-46 T 13-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 P40_06420 d92f2b28af3444b01fa828a172b6a266 558 Pfam PF08774 VRR-NUC domain 441 554 1.7E-33 T 13-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 P40_10575 c2b914db7b16060866889a0905e0adc1 364 Pfam PF06996 Type VI secretion, TssG 19 344 1.9E-94 T 13-10-2018 IPR010732 Type VI secretion, TssG-like P40_10575 c2b914db7b16060866889a0905e0adc1 364 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 19 344 2.3E-100 T 13-10-2018 IPR010732 Type VI secretion, TssG-like P40_00365 6507306ded93f9fd0ef568cf45ce5019 187 Gene3D G3DSA:3.40.1740.10 1 187 1.5E-67 T 13-10-2018 P40_00365 6507306ded93f9fd0ef568cf45ce5019 187 SUPERFAMILY SSF143456 5 186 2.75E-62 T 13-10-2018 P40_00365 6507306ded93f9fd0ef568cf45ce5019 187 Pfam PF02622 Uncharacterized ACR, COG1678 15 174 2.4E-48 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 P40_00365 6507306ded93f9fd0ef568cf45ce5019 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 4 187 37.071 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 P40_11075 c25ffe194d000596bb74e600b18e3ef9 395 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 11 385 7.1E-62 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 P40_11075 c25ffe194d000596bb74e600b18e3ef9 395 Pfam PF07690 Major Facilitator Superfamily 23 348 4.8E-31 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_11075 c25ffe194d000596bb74e600b18e3ef9 395 Gene3D G3DSA:1.20.1720.10 11 387 5.9E-75 T 13-10-2018 P40_11075 c25ffe194d000596bb74e600b18e3ef9 395 SUPERFAMILY SSF103473 4 394 2.62E-47 T 13-10-2018 IPR036259 MFS transporter superfamily P40_11075 c25ffe194d000596bb74e600b18e3ef9 395 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 4.0E-6 T 13-10-2018 P40_11075 c25ffe194d000596bb74e600b18e3ef9 395 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 4.0E-6 T 13-10-2018 P40_05130 5ed728528c05c3e465d63aa9e1945b83 285 Pfam PF04072 Leucine carboxyl methyltransferase 51 175 1.9E-14 T 13-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 P40_05130 5ed728528c05c3e465d63aa9e1945b83 285 Gene3D G3DSA:3.40.50.150 23 280 2.2E-26 T 13-10-2018 P40_05130 5ed728528c05c3e465d63aa9e1945b83 285 SUPERFAMILY SSF53335 57 265 2.73E-31 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_12290 e6f39b43ac32d8f38048944775730bed 343 Pfam PF04754 Putative transposase, YhgA-like 3 202 1.0E-24 T 13-10-2018 IPR006842 Transposase (putative), YhgA-like P40_12290 e6f39b43ac32d8f38048944775730bed 343 Pfam PF14261 Domain of unknown function (DUF4351) 284 340 7.9E-7 T 13-10-2018 IPR025587 Domain of unknown function DUF4351 P40_02380 1fc3e583f84dc9e0a58b2d9a86843e24 219 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 4.3E-15 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_02380 1fc3e583f84dc9e0a58b2d9a86843e24 219 SUPERFAMILY SSF52833 1 97 1.58E-20 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_02380 1fc3e583f84dc9e0a58b2d9a86843e24 219 SUPERFAMILY SSF47616 75 205 5.26E-17 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_02380 1fc3e583f84dc9e0a58b2d9a86843e24 219 Gene3D G3DSA:3.40.30.10 1 79 1.8E-25 T 13-10-2018 P40_02380 1fc3e583f84dc9e0a58b2d9a86843e24 219 Gene3D G3DSA:1.20.1050.10 80 219 2.6E-52 T 13-10-2018 P40_13770 5eea473de2344192823276336621b3ad 391 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 1 389 22.506 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 P40_13770 5eea473de2344192823276336621b3ad 391 Pfam PF03616 Sodium/glutamate symporter 2 358 5.1E-117 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 P40_13770 5eea473de2344192823276336621b3ad 391 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 389 5.5E-126 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 P40_05425 c0d0291a5fc11e75fcd93170a74830aa 216 Pfam PF02230 Phospholipase/Carboxylesterase 9 213 3.6E-52 T 13-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 P40_05425 c0d0291a5fc11e75fcd93170a74830aa 216 SUPERFAMILY SSF53474 5 215 9.54E-56 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_05425 c0d0291a5fc11e75fcd93170a74830aa 216 Gene3D G3DSA:3.40.50.1820 2 216 6.5E-69 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_05675 a24750227ede967f441fbadf245f94d1 418 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 127 395 1.9E-72 T 13-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 P40_05675 a24750227ede967f441fbadf245f94d1 418 Pfam PF01458 Uncharacterized protein family (UPF0051) 161 382 1.1E-64 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 P40_05675 a24750227ede967f441fbadf245f94d1 418 SUPERFAMILY SSF101960 24 407 3.01E-87 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily P40_14080 51d0fbc284cee78a39f6aa0bd6aa02ed 517 SUPERFAMILY SSF56801 3 511 1.96E-155 T 13-10-2018 P40_14080 51d0fbc284cee78a39f6aa0bd6aa02ed 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 162 173 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_14080 51d0fbc284cee78a39f6aa0bd6aa02ed 517 Gene3D G3DSA:3.40.50.12780 1 407 6.0E-121 T 13-10-2018 P40_14080 51d0fbc284cee78a39f6aa0bd6aa02ed 517 Pfam PF00501 AMP-binding enzyme 9 414 2.7E-104 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_14080 51d0fbc284cee78a39f6aa0bd6aa02ed 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 423 498 4.6E-21 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_14080 51d0fbc284cee78a39f6aa0bd6aa02ed 517 Gene3D G3DSA:3.30.300.310 410 511 6.3E-34 T 13-10-2018 P40_02755 818cee0ec970a2fc7958a122464510e9 293 Gene3D G3DSA:1.20.1530.20 2 285 1.1E-71 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily P40_02755 818cee0ec970a2fc7958a122464510e9 293 Pfam PF01758 Sodium Bile acid symporter family 14 188 1.2E-32 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 P40_21660 ba32eb0fdaf8b1d393d52541ab3a7757 362 Gene3D G3DSA:2.40.30.170 49 272 1.8E-73 T 13-10-2018 P40_21660 ba32eb0fdaf8b1d393d52541ab3a7757 362 Gene3D G3DSA:1.10.287.470 97 156 1.8E-73 T 13-10-2018 P40_21660 ba32eb0fdaf8b1d393d52541ab3a7757 362 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 343 2.2E-77 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 P40_21660 ba32eb0fdaf8b1d393d52541ab3a7757 362 Gene3D G3DSA:2.40.50.100 62 190 1.8E-73 T 13-10-2018 P40_21660 ba32eb0fdaf8b1d393d52541ab3a7757 362 Gene3D G3DSA:2.40.420.20 273 341 1.8E-73 T 13-10-2018 P40_21660 ba32eb0fdaf8b1d393d52541ab3a7757 362 SUPERFAMILY SSF111369 50 266 1.11E-40 T 13-10-2018 P40_21660 ba32eb0fdaf8b1d393d52541ab3a7757 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 261 3.2E-30 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain P40_06115 d7cf028acd98be8b690fd854d928a8d7 219 Pfam PF12146 Serine aminopeptidase, S33 55 140 9.1E-8 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 P40_06115 d7cf028acd98be8b690fd854d928a8d7 219 SUPERFAMILY SSF53474 8 213 2.56E-36 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_06115 d7cf028acd98be8b690fd854d928a8d7 219 Gene3D G3DSA:3.40.50.1820 2 216 2.2E-42 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_10440 9e65039ff74be33a8febbe933f22acba 244 Gene3D G3DSA:3.90.850.10 6 243 1.4E-31 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 P40_10440 9e65039ff74be33a8febbe933f22acba 244 SUPERFAMILY SSF56529 7 241 1.27E-23 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 P40_07750 809edc3cd582a79b1235476682d8d4a5 327 Gene3D G3DSA:3.90.180.10 6 318 1.6E-77 T 13-10-2018 P40_07750 809edc3cd582a79b1235476682d8d4a5 327 SUPERFAMILY SSF50129 1 157 4.09E-47 T 13-10-2018 IPR011032 GroES-like superfamily P40_07750 809edc3cd582a79b1235476682d8d4a5 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 131 6.9E-32 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P40_07750 809edc3cd582a79b1235476682d8d4a5 327 SUPERFAMILY SSF51735 138 295 8.08E-21 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_07750 809edc3cd582a79b1235476682d8d4a5 327 Gene3D G3DSA:3.40.50.720 147 276 1.6E-77 T 13-10-2018 P40_07750 809edc3cd582a79b1235476682d8d4a5 327 TIGRFAM TIGR02822 adh_fam_2: zinc-binding alcohol dehydrogenase family protein 11 326 3.7E-107 T 13-10-2018 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 P40_16955 fb66f4dc363f364e66524486b6e2cb96 399 Pfam PF01494 FAD binding domain 6 325 1.0E-20 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 P40_16955 fb66f4dc363f364e66524486b6e2cb96 399 Gene3D G3DSA:3.50.50.60 6 340 5.1E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_16955 fb66f4dc363f364e66524486b6e2cb96 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 319 2.1E-13 T 13-10-2018 P40_16955 fb66f4dc363f364e66524486b6e2cb96 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.1E-13 T 13-10-2018 P40_16955 fb66f4dc363f364e66524486b6e2cb96 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 303 2.1E-13 T 13-10-2018 P40_16955 fb66f4dc363f364e66524486b6e2cb96 399 Gene3D G3DSA:3.30.9.30 38 282 5.1E-53 T 13-10-2018 P40_16955 fb66f4dc363f364e66524486b6e2cb96 399 SUPERFAMILY SSF51905 5 385 2.11E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_13430 99744649b8d370f093f04d4241158181 233 Gene3D G3DSA:3.30.1500.10 87 222 4.1E-31 T 13-10-2018 IPR036912 Haem-binding HasA superfamily P40_13430 99744649b8d370f093f04d4241158181 233 Pfam PF06438 Heme-binding protein A (HasA) 80 213 5.7E-16 T 13-10-2018 IPR010495 Haem-binding HasA P40_13430 99744649b8d370f093f04d4241158181 233 SUPERFAMILY SSF54621 84 212 8.24E-13 T 13-10-2018 IPR036912 Haem-binding HasA superfamily P40_11830 50096ad1d4a7e8ddce2b3748723446ad 160 SUPERFAMILY SSF89562 1 159 7.98E-47 T 13-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily P40_11830 50096ad1d4a7e8ddce2b3748723446ad 160 Gene3D G3DSA:3.50.30.40 1 160 1.1E-61 T 13-10-2018 P40_11830 50096ad1d4a7e8ddce2b3748723446ad 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 153 1.8E-61 T 13-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 P40_11830 50096ad1d4a7e8ddce2b3748723446ad 160 Pfam PF03737 Aldolase/RraA 5 153 2.3E-45 T 13-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein P40_15090 8e04bfaf039ea171106db4b51ee9ec3a 141 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 1 136 29.638 T 13-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 P40_15090 8e04bfaf039ea171106db4b51ee9ec3a 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 137 3.0E-28 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 P40_15090 8e04bfaf039ea171106db4b51ee9ec3a 141 TIGRFAM TIGR02801 tolR: protein TolR 10 136 7.4E-44 T 13-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 P40_15090 8e04bfaf039ea171106db4b51ee9ec3a 141 Gene3D G3DSA:3.30.420.270 56 129 2.7E-18 T 13-10-2018 P40_12645 be45df518aa005c1feddc79af347d8a0 233 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_12645 be45df518aa005c1feddc79af347d8a0 233 SUPERFAMILY SSF52540 1 230 1.12E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_12645 be45df518aa005c1feddc79af347d8a0 233 Pfam PF00005 ABC transporter 17 160 1.3E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_12645 be45df518aa005c1feddc79af347d8a0 233 SMART SM00382 26 200 3.4E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_12645 be45df518aa005c1feddc79af347d8a0 233 Gene3D G3DSA:3.40.50.300 1 233 4.4E-53 T 13-10-2018 P40_21275 54361fe88c9f039aa4dd89ec6071cbe7 348 SUPERFAMILY SSF53850 25 338 4.95E-68 T 13-10-2018 P40_21275 54361fe88c9f039aa4dd89ec6071cbe7 348 Gene3D G3DSA:3.40.190.10 26 308 2.3E-52 T 13-10-2018 P40_21275 54361fe88c9f039aa4dd89ec6071cbe7 348 Gene3D G3DSA:3.40.190.10 110 282 2.3E-52 T 13-10-2018 P40_21275 54361fe88c9f039aa4dd89ec6071cbe7 348 Pfam PF12849 PBP superfamily domain 19 308 4.9E-40 T 13-10-2018 IPR024370 PBP domain P40_19410 42139a46774d10ea7cfebc065c07a368 128 Gene3D G3DSA:1.20.120.550 1 126 6.3E-20 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily P40_19410 42139a46774d10ea7cfebc065c07a368 128 SUPERFAMILY SSF161084 2 126 6.02E-27 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily P40_19410 42139a46774d10ea7cfebc065c07a368 128 Pfam PF01124 MAPEG family 4 126 3.2E-24 T 13-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein P40_21315 c95b97238b5abbb62bce489aa71cfb78 280 PIRSF PIRSF007580 3 275 1.2E-69 T 13-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 P40_21315 c95b97238b5abbb62bce489aa71cfb78 280 Pfam PF10118 Predicted metal-dependent hydrolase 9 260 3.8E-78 T 13-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 P40_13095 472a46d14daaa1ba250b428d72f4ffb0 238 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 3 233 54.878 T 13-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 P40_13095 472a46d14daaa1ba250b428d72f4ffb0 238 SUPERFAMILY SSF52467 3 231 4.63E-71 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily P40_13095 472a46d14daaa1ba250b428d72f4ffb0 238 Pfam PF02146 Sir2 family 10 183 3.2E-46 T 13-10-2018 IPR003000 Sirtuin family GO:0070403 P40_13095 472a46d14daaa1ba250b428d72f4ffb0 238 Gene3D G3DSA:3.30.1600.10 19 155 9.6E-78 T 13-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily P40_13095 472a46d14daaa1ba250b428d72f4ffb0 238 Gene3D G3DSA:3.40.50.1220 5 225 9.6E-78 T 13-10-2018 P40_12315 5573e387ba052057a88a223a01ad1a91 391 Gene3D G3DSA:3.40.190.170 112 332 1.2E-19 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_14870 7a5036c48b0640bc2a02679b09ab0236 429 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 35 81 1.5E-11 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger P40_14870 7a5036c48b0640bc2a02679b09ab0236 429 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 88 136 4.7E-9 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain P40_14870 7a5036c48b0640bc2a02679b09ab0236 429 Pfam PF01610 Transposase 152 386 2.8E-62 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain P40_03830 69e56effce81c9683d9b84c48f22399a 118 Pfam PF05635 23S rRNA-intervening sequence protein 10 108 5.3E-22 T 13-10-2018 IPR012657 23S rRNA-intervening sequence protein P40_03830 69e56effce81c9683d9b84c48f22399a 118 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 10 115 6.6E-27 T 13-10-2018 IPR012657 23S rRNA-intervening sequence protein P40_03830 69e56effce81c9683d9b84c48f22399a 118 PIRSF PIRSF035652 1 118 8.0E-41 T 13-10-2018 IPR012657 23S rRNA-intervening sequence protein P40_03830 69e56effce81c9683d9b84c48f22399a 118 Gene3D G3DSA:1.20.1440.60 2 117 5.7E-37 T 13-10-2018 IPR036583 23S rRNA-intervening sequence superfamily P40_03830 69e56effce81c9683d9b84c48f22399a 118 SUPERFAMILY SSF158446 10 112 1.57E-28 T 13-10-2018 IPR036583 23S rRNA-intervening sequence superfamily P40_00970 9f72f2832032db8c9c69bbd8e6a4e0b5 396 Gene3D G3DSA:3.40.50.2300 3 127 8.7E-36 T 13-10-2018 P40_00970 9f72f2832032db8c9c69bbd8e6a4e0b5 396 Pfam PF16968 Pilus assembly protein TadZ N-terminal 18 120 8.8E-12 T 13-10-2018 IPR031580 Pilus assembly protein TadZ, N-terminal P40_00970 9f72f2832032db8c9c69bbd8e6a4e0b5 396 SUPERFAMILY SSF52540 143 375 2.66E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_00970 9f72f2832032db8c9c69bbd8e6a4e0b5 396 Gene3D G3DSA:3.40.50.300 139 376 3.2E-21 T 13-10-2018 P40_00970 9f72f2832032db8c9c69bbd8e6a4e0b5 396 SUPERFAMILY SSF52172 7 124 9.66E-7 T 13-10-2018 IPR011006 CheY-like superfamily P40_21370 64b753d7121a81962a2982640c48cc3f 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 285 5.1E-31 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_21370 64b753d7121a81962a2982640c48cc3f 286 Gene3D G3DSA:1.10.3720.10 76 280 2.4E-18 T 13-10-2018 IPR035906 MetI-like superfamily P40_21370 64b753d7121a81962a2982640c48cc3f 286 SUPERFAMILY SSF161098 82 270 2.22E-23 T 13-10-2018 IPR035906 MetI-like superfamily P40_13920 d9c3fc5865e51205a7fc62667b197b30 102 Pfam PF05166 YcgL domain 9 81 2.5E-26 T 13-10-2018 IPR027354 YcgL domain P40_13920 d9c3fc5865e51205a7fc62667b197b30 102 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 8 85 2.0E-17 T 13-10-2018 IPR027354 YcgL domain P40_13920 d9c3fc5865e51205a7fc62667b197b30 102 SUPERFAMILY SSF160191 5 86 4.71E-30 T 13-10-2018 IPR038068 YcgL-like superfamily P40_13920 d9c3fc5865e51205a7fc62667b197b30 102 Hamap MF_01866 Protein YcgL [ycgL]. 7 97 22.67 T 13-10-2018 IPR027354 YcgL domain P40_13920 d9c3fc5865e51205a7fc62667b197b30 102 Gene3D G3DSA:3.10.510.20 5 80 3.1E-26 T 13-10-2018 IPR038068 YcgL-like superfamily P40_20100 7980e02d7a86775ece7e32eb69710c5d 149 Pfam PF02082 Transcriptional regulator 1 81 1.7E-19 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type P40_20100 7980e02d7a86775ece7e32eb69710c5d 149 SUPERFAMILY SSF46785 4 136 7.96E-30 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_20100 7980e02d7a86775ece7e32eb69710c5d 149 Gene3D G3DSA:1.10.10.10 1 148 2.4E-39 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_02570 c335d674fe0bf8c295cf70f00e41d377 202 SUPERFAMILY SSF109604 12 136 1.47E-26 T 13-10-2018 P40_02570 c335d674fe0bf8c295cf70f00e41d377 202 Pfam PF01966 HD domain 59 120 2.1E-5 T 13-10-2018 IPR006674 HD domain P40_02570 c335d674fe0bf8c295cf70f00e41d377 202 Gene3D G3DSA:1.10.3210.10 39 194 1.6E-20 T 13-10-2018 P40_10565 2f1760c799349eb254104af4368a9a3f 169 Pfam PF04965 Gene 25-like lysozyme 40 139 1.1E-18 T 13-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD P40_10565 2f1760c799349eb254104af4368a9a3f 169 SUPERFAMILY SSF160719 70 152 2.48E-9 T 13-10-2018 P40_10565 2f1760c799349eb254104af4368a9a3f 169 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 11 159 5.9E-35 T 13-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein P40_00505 a174f3005217b2210ca482da3a286bf3 202 Pfam PF04203 Sortase family 71 180 8.2E-17 T 13-10-2018 IPR005754 Sortase family P40_00505 a174f3005217b2210ca482da3a286bf3 202 Gene3D G3DSA:2.40.260.10 62 184 7.1E-18 T 13-10-2018 IPR023365 Sortase domain superfamily P40_00505 a174f3005217b2210ca482da3a286bf3 202 TIGRFAM TIGR03784 marine_sortase: sortase, marine proteobacterial type 17 178 6.6E-59 T 13-10-2018 IPR022445 Sortase, proteobacterial type P40_00505 a174f3005217b2210ca482da3a286bf3 202 SUPERFAMILY SSF63817 70 182 8.24E-14 T 13-10-2018 IPR023365 Sortase domain superfamily P40_16325 03831a8387346261c774d0b4dc535c7d 443 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 439 1.9E-147 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_16325 03831a8387346261c774d0b4dc535c7d 443 PRINTS PR00175 Sodium/alanine symporter signature 89 111 5.5E-50 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_16325 03831a8387346261c774d0b4dc535c7d 443 PRINTS PR00175 Sodium/alanine symporter signature 349 371 5.5E-50 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_16325 03831a8387346261c774d0b4dc535c7d 443 PRINTS PR00175 Sodium/alanine symporter signature 408 428 5.5E-50 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_16325 03831a8387346261c774d0b4dc535c7d 443 PRINTS PR00175 Sodium/alanine symporter signature 182 200 5.5E-50 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_16325 03831a8387346261c774d0b4dc535c7d 443 PRINTS PR00175 Sodium/alanine symporter signature 210 229 5.5E-50 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_16325 03831a8387346261c774d0b4dc535c7d 443 PRINTS PR00175 Sodium/alanine symporter signature 305 323 5.5E-50 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_16325 03831a8387346261c774d0b4dc535c7d 443 Pfam PF01235 Sodium:alanine symporter family 54 442 1.6E-139 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P40_16325 03831a8387346261c774d0b4dc535c7d 443 Gene3D G3DSA:1.20.1740.10 57 441 1.8E-9 T 13-10-2018 P40_05435 8cccb47d84310f52fb278d8234580bde 264 Gene3D G3DSA:3.30.450.180 87 263 2.2E-5 T 13-10-2018 P40_05435 8cccb47d84310f52fb278d8234580bde 264 SMART SM00530 6 61 2.0E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_05435 8cccb47d84310f52fb278d8234580bde 264 Pfam PF13560 Helix-turn-helix domain 3 64 8.8E-11 T 13-10-2018 P40_05435 8cccb47d84310f52fb278d8234580bde 264 SUPERFAMILY SSF47413 2 61 2.58E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_05435 8cccb47d84310f52fb278d8234580bde 264 Gene3D G3DSA:1.10.260.40 2 83 5.8E-14 T 13-10-2018 P40_21030 7214b3aee1758b72aa201ccc0bd4573d 113 Pfam PF11743 Protein of unknown function (DUF3301) 8 102 9.5E-33 T 13-10-2018 IPR021732 Protein of unknown function DUF3301 P40_04450 558d3f676c5aa3adff2ed29c7a9b252a 3906 Pfam PF12545 Filamentous haemagglutinin family outer membrane protein 3699 3808 9.2E-41 T 13-10-2018 IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 P40_04450 558d3f676c5aa3adff2ed29c7a9b252a 3906 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 165 241 4.9E-22 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal P40_04450 558d3f676c5aa3adff2ed29c7a9b252a 3906 SMART SM00912 130 244 1.2E-25 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal P40_04450 558d3f676c5aa3adff2ed29c7a9b252a 3906 Pfam PF05860 haemagglutination activity domain 140 244 4.0E-21 T 13-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal P40_04450 558d3f676c5aa3adff2ed29c7a9b252a 3906 Gene3D G3DSA:2.160.20.10 135 440 1.6E-54 T 13-10-2018 IPR012334 Pectin lyase fold P40_04450 558d3f676c5aa3adff2ed29c7a9b252a 3906 SUPERFAMILY SSF51126 141 491 2.2E-37 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor P40_10545 c0a21efc374e4ceb4a214c318c2faa86 165 SUPERFAMILY SSF48452 5 67 1.72E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_10545 c0a21efc374e4ceb4a214c318c2faa86 165 Gene3D G3DSA:1.25.40.10 2 128 4.7E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_06375 6a8014df16c6d4badacdcdb7932138d6 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 218 2.6E-5 T 13-10-2018 P40_06375 6a8014df16c6d4badacdcdb7932138d6 246 SUPERFAMILY SSF51735 1 245 9.34E-75 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_06375 6a8014df16c6d4badacdcdb7932138d6 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_06375 6a8014df16c6d4badacdcdb7932138d6 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.3E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06375 6a8014df16c6d4badacdcdb7932138d6 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.3E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06375 6a8014df16c6d4badacdcdb7932138d6 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.3E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06375 6a8014df16c6d4badacdcdb7932138d6 246 Gene3D G3DSA:3.40.50.720 1 245 4.8E-81 T 13-10-2018 P40_06375 6a8014df16c6d4badacdcdb7932138d6 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 245 5.7E-56 T 13-10-2018 P40_06375 6a8014df16c6d4badacdcdb7932138d6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.2E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06375 6a8014df16c6d4badacdcdb7932138d6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.2E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06375 6a8014df16c6d4badacdcdb7932138d6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.2E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06375 6a8014df16c6d4badacdcdb7932138d6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.2E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06375 6a8014df16c6d4badacdcdb7932138d6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.2E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_06375 6a8014df16c6d4badacdcdb7932138d6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.2E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11175 6f4460632b406fad38c81648fe5be0fe 296 SMART SM00563 87 229 5.8E-21 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_11175 6f4460632b406fad38c81648fe5be0fe 296 Pfam PF01553 Acyltransferase 74 228 4.6E-14 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P40_11175 6f4460632b406fad38c81648fe5be0fe 296 SUPERFAMILY SSF69593 25 288 3.92E-37 T 13-10-2018 P40_07775 97a39ce1691638d0b9b9f301d8882d9b 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 7.4E-18 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_07775 97a39ce1691638d0b9b9f301d8882d9b 215 SUPERFAMILY SSF46689 2 75 1.65E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_07775 97a39ce1691638d0b9b9f301d8882d9b 215 SUPERFAMILY SSF48498 83 201 1.33E-14 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_07775 97a39ce1691638d0b9b9f301d8882d9b 215 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 83 202 3.6E-33 T 13-10-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 P40_07775 97a39ce1691638d0b9b9f301d8882d9b 215 Gene3D G3DSA:1.10.357.10 1 211 3.9E-65 T 13-10-2018 P40_07775 97a39ce1691638d0b9b9f301d8882d9b 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.8E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_07775 97a39ce1691638d0b9b9f301d8882d9b 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.8E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_10180 d145ac24d665840f7ccfc5eff8f0957d 75 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 4 75 8.2E-15 T 13-10-2018 IPR021676 Protein of unknown function DUF3262 P40_10180 d145ac24d665840f7ccfc5eff8f0957d 75 Pfam PF11660 Protein of unknown function (DUF3262) 2 74 3.5E-20 T 13-10-2018 IPR021676 Protein of unknown function DUF3262 P40_09730 608d4010d31e1ca5bb5247277f5b4b45 201 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 9 191 7.7E-52 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 P40_09730 608d4010d31e1ca5bb5247277f5b4b45 201 PIRSF PIRSF000847 5 200 2.8E-47 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 P40_09730 608d4010d31e1ca5bb5247277f5b4b45 201 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 P40_09730 608d4010d31e1ca5bb5247277f5b4b45 201 Gene3D G3DSA:1.20.120.1760 7 194 2.2E-17 T 13-10-2018 P40_09730 608d4010d31e1ca5bb5247277f5b4b45 201 Pfam PF01066 CDP-alcohol phosphatidyltransferase 9 76 2.1E-17 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 P40_04560 3b95c49c5afdaf51a2fce18d0ed748ae 204 SUPERFAMILY SSF69118 22 191 2.88E-23 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 P40_04560 3b95c49c5afdaf51a2fce18d0ed748ae 204 Pfam PF02627 Carboxymuconolactone decarboxylase family 58 119 7.3E-8 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 P40_04560 3b95c49c5afdaf51a2fce18d0ed748ae 204 Gene3D G3DSA:1.20.1290.10 34 198 9.0E-23 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 P40_06630 e74fb39089102246f31b192f6ed3ea87 389 Pfam PF00144 Beta-lactamase 32 368 5.4E-61 T 13-10-2018 IPR001466 Beta-lactamase-related P40_06630 e74fb39089102246f31b192f6ed3ea87 389 Gene3D G3DSA:3.40.710.30 21 387 3.8E-78 T 13-10-2018 P40_06630 e74fb39089102246f31b192f6ed3ea87 389 SUPERFAMILY SSF56601 23 366 3.38E-66 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like P40_11410 f2341e95a8df2ea359fd947270678d82 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 254 1.4E-85 T 13-10-2018 P40_11410 f2341e95a8df2ea359fd947270678d82 267 Gene3D G3DSA:3.40.50.720 1 263 2.2E-60 T 13-10-2018 P40_11410 f2341e95a8df2ea359fd947270678d82 267 SUPERFAMILY SSF51735 6 254 5.71E-64 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_11410 f2341e95a8df2ea359fd947270678d82 267 PIRSF PIRSF000094 1 263 1.7E-110 T 13-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 P40_11410 f2341e95a8df2ea359fd947270678d82 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.5E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11410 f2341e95a8df2ea359fd947270678d82 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.5E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11410 f2341e95a8df2ea359fd947270678d82 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.5E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_11410 f2341e95a8df2ea359fd947270678d82 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.5E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_13325 e6687a291acef999d2f3689a4675d175 362 Gene3D G3DSA:3.40.630.30 1 133 1.8E-5 T 13-10-2018 P40_13325 e6687a291acef999d2f3689a4675d175 362 SUPERFAMILY SSF55729 1 186 3.51E-8 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_17190 3cec49899e357ee4b0cb369c5f8b9aed 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 4.0E-6 T 13-10-2018 IPR001451 Hexapeptide repeat P40_17190 3cec49899e357ee4b0cb369c5f8b9aed 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 7.2E-5 T 13-10-2018 IPR001451 Hexapeptide repeat P40_17190 3cec49899e357ee4b0cb369c5f8b9aed 256 SUPERFAMILY SSF51161 3 171 3.88E-57 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily P40_17190 3cec49899e357ee4b0cb369c5f8b9aed 256 Gene3D G3DSA:2.160.10.10 67 190 9.1E-37 T 13-10-2018 P40_17190 3cec49899e357ee4b0cb369c5f8b9aed 256 Pfam PF06426 Serine acetyltransferase, N-terminal 3 35 5.9E-5 T 13-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 P40_17190 3cec49899e357ee4b0cb369c5f8b9aed 256 Gene3D G3DSA:1.10.3130.10 1 66 2.1E-25 T 13-10-2018 P40_17190 3cec49899e357ee4b0cb369c5f8b9aed 256 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 5 166 1.4E-78 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 P40_13735 6c76e63b8e6b6d83af0c8a02fd8a7eff 194 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 191 5.6E-60 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 P40_13735 6c76e63b8e6b6d83af0c8a02fd8a7eff 194 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 192 24.832 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 P40_13735 6c76e63b8e6b6d83af0c8a02fd8a7eff 194 PIRSF PIRSF006102 1 194 1.5E-58 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 P40_13735 6c76e63b8e6b6d83af0c8a02fd8a7eff 194 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 192 9.8E-84 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 P40_04075 16f88be688dffd4d02ede99907b2052c 158 PIRSF PIRSF006162 1 155 3.8E-45 T 13-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 P40_04075 16f88be688dffd4d02ede99907b2052c 158 Pfam PF04608 Phosphatidylglycerophosphatase A 8 147 1.4E-45 T 13-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 P40_04075 16f88be688dffd4d02ede99907b2052c 158 SUPERFAMILY SSF101307 3 147 3.79E-36 T 13-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 P40_02830 7c48bc30199d3859eb57d203c621ba9c 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 9.8E-59 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 P40_02830 7c48bc30199d3859eb57d203c621ba9c 154 PIRSF PIRSF029256 1 154 7.7E-64 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 P40_02830 7c48bc30199d3859eb57d203c621ba9c 154 Gene3D G3DSA:3.40.1280.10 1 154 2.0E-64 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal P40_02830 7c48bc30199d3859eb57d203c621ba9c 154 Pfam PF00588 SpoU rRNA Methylase family 2 142 2.0E-33 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 P40_02830 7c48bc30199d3859eb57d203c621ba9c 154 SUPERFAMILY SSF75217 1 152 6.21E-45 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases P40_02830 7c48bc30199d3859eb57d203c621ba9c 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 33.83 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 P40_11740 2ad5f23bd454649df4e634b74830e25d 264 Gene3D G3DSA:3.10.129.90 3 263 1.5E-67 T 13-10-2018 P40_11740 2ad5f23bd454649df4e634b74830e25d 264 SUPERFAMILY SSF54637 112 262 4.1E-21 T 13-10-2018 IPR029069 HotDog domain superfamily P40_11740 2ad5f23bd454649df4e634b74830e25d 264 Pfam PF13622 Thioesterase-like superfamily 18 262 1.2E-45 T 13-10-2018 P40_11740 2ad5f23bd454649df4e634b74830e25d 264 SUPERFAMILY SSF54637 12 110 1.58E-17 T 13-10-2018 IPR029069 HotDog domain superfamily P40_07345 962e12ba7596b016700b5f3762c8de8d 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 1.3E-56 T 13-10-2018 P40_07345 962e12ba7596b016700b5f3762c8de8d 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 1.3E-56 T 13-10-2018 P40_07345 962e12ba7596b016700b5f3762c8de8d 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 1.3E-56 T 13-10-2018 P40_07345 962e12ba7596b016700b5f3762c8de8d 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 1.3E-56 T 13-10-2018 P40_07345 962e12ba7596b016700b5f3762c8de8d 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 1.3E-56 T 13-10-2018 P40_07345 962e12ba7596b016700b5f3762c8de8d 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 1.3E-56 T 13-10-2018 P40_07345 962e12ba7596b016700b5f3762c8de8d 223 Pfam PF03379 CcmB protein 7 219 2.8E-70 T 13-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07345 962e12ba7596b016700b5f3762c8de8d 223 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 9 218 2.5E-70 T 13-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria P40_07345 962e12ba7596b016700b5f3762c8de8d 223 PIRSF PIRSF002764 1 222 1.8E-73 T 13-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria P40_06710 309b8d5bc5baa0c9dc2e2d11de2be9da 454 SUPERFAMILY SSF53187 97 387 6.28E-62 T 13-10-2018 P40_06710 309b8d5bc5baa0c9dc2e2d11de2be9da 454 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 120 386 5.2E-50 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 P40_06710 309b8d5bc5baa0c9dc2e2d11de2be9da 454 Gene3D G3DSA:3.40.630.10 83 390 3.3E-84 T 13-10-2018 P40_16990 790760ad4115fbe066ba732677cfc627 901 Pfam PF10101 Predicted membrane protein (DUF2339) 147 894 2.6E-152 T 13-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane P40_16990 790760ad4115fbe066ba732677cfc627 901 PIRSF PIRSF035905 31 901 1.8E-97 T 13-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein P40_15380 c577648e5b3911e602602b17c8922ae5 521 Pfam PF02690 Na+/Pi-cotransporter 13 153 1.8E-41 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 P40_15380 c577648e5b3911e602602b17c8922ae5 521 Pfam PF02690 Na+/Pi-cotransporter 173 249 9.5E-10 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 P40_05540 b6d66c3cf00b1d59cec72a383ff186be 260 Gene3D G3DSA:3.40.50.300 1 255 8.1E-60 T 13-10-2018 P40_05540 b6d66c3cf00b1d59cec72a383ff186be 260 SMART SM00382 28 217 9.9E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_05540 b6d66c3cf00b1d59cec72a383ff186be 260 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_05540 b6d66c3cf00b1d59cec72a383ff186be 260 SUPERFAMILY SSF52540 3 219 3.4E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_05540 b6d66c3cf00b1d59cec72a383ff186be 260 Pfam PF00005 ABC transporter 19 168 1.2E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_19545 84516b28599152a0d40abbeb7788941c 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 34 274 7.0E-84 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 P40_19545 84516b28599152a0d40abbeb7788941c 279 SUPERFAMILY SSF53335 9 274 1.66E-87 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_19545 84516b28599152a0d40abbeb7788941c 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 39.075 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 P40_19545 84516b28599152a0d40abbeb7788941c 279 Gene3D G3DSA:3.40.50.150 1 279 1.7E-106 T 13-10-2018 P40_08775 ad4db323beb946b56c39bd546b2f0405 417 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 409 6.3E-163 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 P40_08775 ad4db323beb946b56c39bd546b2f0405 417 Pfam PF03116 NQR2, RnfD, RnfE family 42 406 2.5E-108 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 P40_08775 ad4db323beb946b56c39bd546b2f0405 417 PIRSF PIRSF016055 1 415 4.0E-184 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 P40_08775 ad4db323beb946b56c39bd546b2f0405 417 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 413 36.351 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 P40_16730 abcaae08f47e112b6059df957c96eab7 252 Gene3D G3DSA:3.40.1390.30 98 223 1.3E-81 T 13-10-2018 P40_16730 abcaae08f47e112b6059df957c96eab7 252 SUPERFAMILY SSF102705 1 251 2.88E-82 T 13-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily P40_16730 abcaae08f47e112b6059df957c96eab7 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 239 5.9E-60 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 P40_16730 abcaae08f47e112b6059df957c96eab7 252 Gene3D G3DSA:3.40.1390.30 15 237 1.3E-81 T 13-10-2018 P40_16730 abcaae08f47e112b6059df957c96eab7 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 4 251 4.4E-63 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 P40_06535 1135f6ebca7bd1b16dcb92440c4146bd 201 SUPERFAMILY SSF55811 30 186 3.38E-29 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 P40_06535 1135f6ebca7bd1b16dcb92440c4146bd 201 Pfam PF00293 NUDIX domain 34 136 3.1E-9 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 P40_06535 1135f6ebca7bd1b16dcb92440c4146bd 201 Gene3D G3DSA:3.90.79.10 24 189 2.7E-46 T 13-10-2018 P40_03615 0f8eb513f6d0c5e3b4fb9bbb64f07706 143 Gene3D G3DSA:3.40.50.300 6 143 7.2E-43 T 13-10-2018 P40_03615 0f8eb513f6d0c5e3b4fb9bbb64f07706 143 SUPERFAMILY SSF52540 28 132 3.19E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_03615 0f8eb513f6d0c5e3b4fb9bbb64f07706 143 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 140 5.6E-47 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 P40_03615 0f8eb513f6d0c5e3b4fb9bbb64f07706 143 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 131 2.3E-39 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 P40_02705 3fc34abb50a6f3fdcaf071f9115c10cc 407 SUPERFAMILY SSF55073 216 297 1.29E-6 T 13-10-2018 IPR029787 Nucleotide cyclase P40_12435 1eb43897d2bd6cda0b7f6102ea8706a7 479 Gene3D G3DSA:3.40.50.10420 132 297 4.9E-16 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily P40_12435 1eb43897d2bd6cda0b7f6102ea8706a7 479 Pfam PF13183 4Fe-4S dicluster domain 314 380 4.9E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain P40_12435 1eb43897d2bd6cda0b7f6102ea8706a7 479 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 22 423 5.0E-147 T 13-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 P40_12435 1eb43897d2bd6cda0b7f6102ea8706a7 479 SUPERFAMILY SSF46548 291 393 5.58E-17 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P40_12435 1eb43897d2bd6cda0b7f6102ea8706a7 479 Pfam PF02589 LUD domain 73 297 1.9E-55 T 13-10-2018 IPR003741 LUD domain P40_12435 1eb43897d2bd6cda0b7f6102ea8706a7 479 Pfam PF11870 Domain of unknown function (DUF3390) 388 474 4.5E-27 T 13-10-2018 IPR024569 4Fe-4S binding protein, C-terminal P40_12435 1eb43897d2bd6cda0b7f6102ea8706a7 479 SUPERFAMILY SSF100950 68 298 3.93E-41 T 13-10-2018 IPR037171 NagB/RpiA transferase-like P40_12435 1eb43897d2bd6cda0b7f6102ea8706a7 479 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 316 327 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P40_18370 d79dba8e65dde14ae22e7466a6a543c9 554 PRINTS PR00154 AMP-binding signature 165 176 7.3E-5 T 13-10-2018 IPR020459 AMP-binding P40_18370 d79dba8e65dde14ae22e7466a6a543c9 554 PRINTS PR00154 AMP-binding signature 177 185 7.3E-5 T 13-10-2018 IPR020459 AMP-binding P40_18370 d79dba8e65dde14ae22e7466a6a543c9 554 SUPERFAMILY SSF56801 3 540 8.63E-120 T 13-10-2018 P40_18370 d79dba8e65dde14ae22e7466a6a543c9 554 ProSitePatterns PS00455 Putative AMP-binding domain signature. 170 181 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_18370 d79dba8e65dde14ae22e7466a6a543c9 554 Pfam PF00501 AMP-binding enzyme 9 427 6.2E-99 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_18370 d79dba8e65dde14ae22e7466a6a543c9 554 Gene3D G3DSA:3.40.50.12780 1 420 7.2E-96 T 13-10-2018 P40_18370 d79dba8e65dde14ae22e7466a6a543c9 554 Gene3D G3DSA:3.30.300.30 424 542 2.6E-5 T 13-10-2018 P40_07170 b338d6ba78c9ea1984000209ad7dde49 259 Gene3D G3DSA:3.30.420.10 3 212 7.7E-17 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_07170 b338d6ba78c9ea1984000209ad7dde49 259 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 46 254 1.1E-89 T 13-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like P40_07170 b338d6ba78c9ea1984000209ad7dde49 259 SUPERFAMILY SSF53098 2 221 6.2E-39 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_16520 c75fe65ec5541062176089d5b9e6cac3 189 SMART SM00749 127 189 0.0069 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria P40_16520 c75fe65ec5541062176089d5b9e6cac3 189 SMART SM00749 49 113 1.5 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria P40_16520 c75fe65ec5541062176089d5b9e6cac3 189 Pfam PF04972 BON domain 45 112 2.1E-15 T 13-10-2018 IPR007055 BON domain P40_16520 c75fe65ec5541062176089d5b9e6cac3 189 Pfam PF04972 BON domain 122 186 1.9E-12 T 13-10-2018 IPR007055 BON domain P40_02360 872c388224e93c47bb77da575605a847 146 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 76 7.5E-16 T 13-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 P40_02360 872c388224e93c47bb77da575605a847 146 SUPERFAMILY SSF69118 5 146 6.72E-48 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 P40_02360 872c388224e93c47bb77da575605a847 146 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 93 6.4E-20 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 P40_02360 872c388224e93c47bb77da575605a847 146 Gene3D G3DSA:1.20.1290.10 1 146 2.8E-51 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 P40_21585 3716910e22c6780782cdd1b906b4a487 275 Pfam PF13614 AAA domain 8 184 2.4E-64 T 13-10-2018 IPR025669 AAA domain P40_21585 3716910e22c6780782cdd1b906b4a487 275 Gene3D G3DSA:3.40.50.300 4 267 4.8E-82 T 13-10-2018 P40_21585 3716910e22c6780782cdd1b906b4a487 275 SUPERFAMILY SSF52540 8 260 2.39E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_11835 bf6a6364090971cad6330d15e55b25fe 230 Pfam PF13460 NAD(P)H-binding 9 143 7.3E-10 T 13-10-2018 IPR016040 NAD(P)-binding domain P40_11835 bf6a6364090971cad6330d15e55b25fe 230 Gene3D G3DSA:3.40.50.720 1 220 1.3E-53 T 13-10-2018 P40_11835 bf6a6364090971cad6330d15e55b25fe 230 SUPERFAMILY SSF51735 2 204 1.3E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_16870 2b34dfd4cca1e9f5788f08e2d6611b0e 282 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 156 176 - T 13-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site P40_16870 2b34dfd4cca1e9f5788f08e2d6611b0e 282 Pfam PF00795 Carbon-nitrogen hydrolase 6 262 1.1E-52 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 P40_16870 2b34dfd4cca1e9f5788f08e2d6611b0e 282 Gene3D G3DSA:3.60.110.10 2 279 2.5E-83 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P40_16870 2b34dfd4cca1e9f5788f08e2d6611b0e 282 SUPERFAMILY SSF56317 1 270 1.19E-72 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P40_20215 c442096a7b1db2f21e480e131ff23d93 215 SUPERFAMILY SSF48498 91 194 7.42E-21 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_20215 c442096a7b1db2f21e480e131ff23d93 215 Gene3D G3DSA:1.10.357.10 7 199 2.0E-45 T 13-10-2018 P40_20215 c442096a7b1db2f21e480e131ff23d93 215 SUPERFAMILY SSF46689 12 80 9.48E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_20215 c442096a7b1db2f21e480e131ff23d93 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 64 9.8E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_20215 c442096a7b1db2f21e480e131ff23d93 215 Pfam PF13305 WHG domain 91 176 3.9E-13 T 13-10-2018 IPR025996 WHG domain P40_20215 c442096a7b1db2f21e480e131ff23d93 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 5.1E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_20215 c442096a7b1db2f21e480e131ff23d93 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 5.1E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_01725 993ff93698933c2101934425f825b0a7 333 Pfam PF04338 Protein of unknown function, DUF481 130 331 1.1E-40 T 13-10-2018 IPR007433 Protein of unknown function DUF481 P40_20160 5a034802a8aee467c5d3d065728d7329 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 11 189 2.7E-44 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_20160 5a034802a8aee467c5d3d065728d7329 204 SUPERFAMILY SSF53254 7 189 1.03E-47 T 13-10-2018 IPR029033 Histidine phosphatase superfamily P40_20160 5a034802a8aee467c5d3d065728d7329 204 SMART SM00855 8 158 8.1E-11 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_20160 5a034802a8aee467c5d3d065728d7329 204 Gene3D G3DSA:3.40.50.1240 5 194 3.3E-50 T 13-10-2018 IPR029033 Histidine phosphatase superfamily P40_20160 5a034802a8aee467c5d3d065728d7329 204 PIRSF PIRSF000709 3 179 0.0034 T 13-10-2018 P40_18025 d6a77393d8e566da981836ab8fe5c169 309 SMART SM00382 36 214 1.4E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_18025 d6a77393d8e566da981836ab8fe5c169 309 SUPERFAMILY SSF52540 27 268 6.33E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18025 d6a77393d8e566da981836ab8fe5c169 309 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 40 206 3.9E-11 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_00545 cc831eebd94b6f3f9c0ed12c1ee36dff 261 Pfam PF07103 Protein of unknown function (DUF1365) 8 245 4.6E-53 T 13-10-2018 IPR010775 Protein of unknown function DUF1365 P40_13790 5c6a67acca63e89a850e7ad84cef3ba7 392 Gene3D G3DSA:1.25.40.10 33 353 9.1E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_13790 5c6a67acca63e89a850e7ad84cef3ba7 392 SUPERFAMILY SSF48452 41 174 3.8E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_13790 5c6a67acca63e89a850e7ad84cef3ba7 392 SUPERFAMILY SSF48452 113 276 3.29E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_13790 5c6a67acca63e89a850e7ad84cef3ba7 392 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 6 389 33.649 T 13-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 P40_02155 3f5e96c68f8d6258421db8bc43bf0ce3 265 Pfam PF01925 Sulfite exporter TauE/SafE 8 261 6.2E-58 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 P40_00045 1bfc53621333dc546f37dfcbd5726940 307 Pfam PF01522 Polysaccharide deacetylase 74 180 5.5E-6 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 P40_00045 1bfc53621333dc546f37dfcbd5726940 307 SUPERFAMILY SSF88713 11 293 6.27E-53 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 P40_00045 1bfc53621333dc546f37dfcbd5726940 307 Gene3D G3DSA:3.20.20.370 11 303 1.7E-60 T 13-10-2018 P40_11090 0820ad5208b4c5bdbac4777bc82c2177 461 SUPERFAMILY SSF141322 397 459 5.62E-10 T 13-10-2018 P40_11090 0820ad5208b4c5bdbac4777bc82c2177 461 SUPERFAMILY SSF52096 39 223 1.99E-25 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_11090 0820ad5208b4c5bdbac4777bc82c2177 461 Pfam PF01957 NfeD-like C-terminal, partner-binding 323 459 3.7E-32 T 13-10-2018 IPR002810 NfeD-like, C-terminal domain P40_11090 0820ad5208b4c5bdbac4777bc82c2177 461 Gene3D G3DSA:3.90.226.10 36 274 1.5E-55 T 13-10-2018 P40_11090 0820ad5208b4c5bdbac4777bc82c2177 461 Gene3D G3DSA:2.40.50.140 400 461 8.4E-14 T 13-10-2018 P40_01760 3a4f79a4fbf1880ee90fe01e1967bf82 131 Gene3D G3DSA:3.30.720.100 7 71 3.0E-24 T 13-10-2018 P40_01760 3a4f79a4fbf1880ee90fe01e1967bf82 131 PIRSF PIRSF021700 1 131 3.0E-35 T 13-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase P40_01760 3a4f79a4fbf1880ee90fe01e1967bf82 131 Gene3D G3DSA:3.30.720.110 72 131 9.8E-31 T 13-10-2018 P40_01760 3a4f79a4fbf1880ee90fe01e1967bf82 131 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 128 1.3E-33 T 13-10-2018 IPR028973 PhnB-like P40_01760 3a4f79a4fbf1880ee90fe01e1967bf82 131 SUPERFAMILY SSF54593 2 130 2.52E-37 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_07470 78ffef0dc9981d6fbcbdb16b6a1e1439 492 Pfam PF03806 AbgT putative transporter family 8 491 6.2E-174 T 13-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 P40_00210 5cfd21e47a77d121947e70aab219283e 263 Pfam PF09339 IclR helix-turn-helix domain 20 71 6.2E-10 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 P40_00210 5cfd21e47a77d121947e70aab219283e 263 Pfam PF01614 Bacterial transcriptional regulator 143 255 1.4E-6 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal P40_00210 5cfd21e47a77d121947e70aab219283e 263 SUPERFAMILY SSF46785 19 88 5.07E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_00210 5cfd21e47a77d121947e70aab219283e 263 SUPERFAMILY SSF55781 76 261 3.6E-28 T 13-10-2018 P40_00210 5cfd21e47a77d121947e70aab219283e 263 Gene3D G3DSA:3.30.450.40 92 257 3.4E-25 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_00210 5cfd21e47a77d121947e70aab219283e 263 Gene3D G3DSA:1.10.10.10 16 91 1.4E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_00210 5cfd21e47a77d121947e70aab219283e 263 SMART SM00346 17 111 3.5E-7 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 P40_10785 386b93e6960a0b052b826194467fef30 554 SUPERFAMILY SSF47226 15 126 3.61E-8 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_10785 386b93e6960a0b052b826194467fef30 554 SUPERFAMILY SSF47226 425 535 1.82E-5 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 P40_21290 f04ce0c817cfb424ba291a26d8c2c7d1 130 Gene3D G3DSA:3.10.129.10 4 130 2.5E-38 T 13-10-2018 P40_21290 f04ce0c817cfb424ba291a26d8c2c7d1 130 SUPERFAMILY SSF54637 11 130 9.97E-35 T 13-10-2018 IPR029069 HotDog domain superfamily P40_21290 f04ce0c817cfb424ba291a26d8c2c7d1 130 Pfam PF03061 Thioesterase superfamily 29 103 3.0E-17 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_20255 7e65f0cb2bc4c0a87040ba89c734e6c0 301 Gene3D G3DSA:3.40.190.10 172 278 6.4E-61 T 13-10-2018 P40_20255 7e65f0cb2bc4c0a87040ba89c734e6c0 301 SUPERFAMILY SSF53850 97 295 1.09E-37 T 13-10-2018 P40_20255 7e65f0cb2bc4c0a87040ba89c734e6c0 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 5.2E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20255 7e65f0cb2bc4c0a87040ba89c734e6c0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 5.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20255 7e65f0cb2bc4c0a87040ba89c734e6c0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 5.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20255 7e65f0cb2bc4c0a87040ba89c734e6c0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 5.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_20255 7e65f0cb2bc4c0a87040ba89c734e6c0 301 Pfam PF03466 LysR substrate binding domain 95 296 4.8E-40 T 13-10-2018 IPR005119 LysR, substrate-binding P40_20255 7e65f0cb2bc4c0a87040ba89c734e6c0 301 Gene3D G3DSA:3.40.190.10 102 294 6.4E-61 T 13-10-2018 P40_20255 7e65f0cb2bc4c0a87040ba89c734e6c0 301 SUPERFAMILY SSF46785 10 93 3.91E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_20255 7e65f0cb2bc4c0a87040ba89c734e6c0 301 Gene3D G3DSA:1.10.10.10 5 92 3.5E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_06495 9c41683d15d40c509665464c51061c1c 136 Pfam PF05154 TM2 domain 9 55 7.4E-15 T 13-10-2018 IPR007829 TM2 domain P40_06495 9c41683d15d40c509665464c51061c1c 136 Pfam PF05154 TM2 domain 73 119 2.1E-15 T 13-10-2018 IPR007829 TM2 domain P40_08460 b49a0092c80dc09e6cf2660a820203b6 374 Pfam PF12698 ABC-2 family transporter protein 19 200 3.1E-14 T 13-10-2018 P40_12125 7e7d01c89a6687a275e35c6462499663 95 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 20 90 8.1E-25 T 13-10-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 P40_20400 ff09d71a726bcb4023260a2aa9105d70 150 SUPERFAMILY SSF46626 71 147 3.73E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_20400 ff09d71a726bcb4023260a2aa9105d70 150 PRINTS PR00607 Class IE cytochrome C signature 135 146 1.5E-14 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 P40_20400 ff09d71a726bcb4023260a2aa9105d70 150 PRINTS PR00607 Class IE cytochrome C signature 81 92 1.5E-14 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 P40_20400 ff09d71a726bcb4023260a2aa9105d70 150 PRINTS PR00607 Class IE cytochrome C signature 92 102 1.5E-14 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 P40_20400 ff09d71a726bcb4023260a2aa9105d70 150 PRINTS PR00607 Class IE cytochrome C signature 120 132 1.5E-14 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 P40_20400 ff09d71a726bcb4023260a2aa9105d70 150 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 70 145 3.2E-17 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_20400 ff09d71a726bcb4023260a2aa9105d70 150 Gene3D G3DSA:1.10.760.10 70 148 4.0E-33 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_01000 fcf604d0820dcfcc3c3ecbc24d762a57 588 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 6 52 9.5E-6 T 13-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal P40_07810 d2eaecbd0637f47ed2ed9577ba5dbdac 255 Pfam PF00005 ABC transporter 17 177 9.7E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_07810 d2eaecbd0637f47ed2ed9577ba5dbdac 255 SMART SM00382 26 226 2.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_07810 d2eaecbd0637f47ed2ed9577ba5dbdac 255 SUPERFAMILY SSF52540 2 249 1.2E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07810 d2eaecbd0637f47ed2ed9577ba5dbdac 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 248 3.2E-12 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal P40_07810 d2eaecbd0637f47ed2ed9577ba5dbdac 255 Gene3D G3DSA:3.40.50.300 1 249 8.1E-66 T 13-10-2018 P40_04500 aa6115aa999a5e55d42fad83eaa65ca6 396 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 127 353 3.1E-31 T 13-10-2018 IPR018713 Domain of unknown function DUF2236 P40_18705 bf11ac37c796f0af12f704274e9369ea 283 Pfam PF00809 Pterin binding enzyme 22 261 7.5E-85 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_18705 bf11ac37c796f0af12f704274e9369ea 283 SUPERFAMILY SSF51717 7 278 4.45E-102 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_18705 bf11ac37c796f0af12f704274e9369ea 283 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 55 68 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_18705 bf11ac37c796f0af12f704274e9369ea 283 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 21 275 8.9E-100 T 13-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 P40_18705 bf11ac37c796f0af12f704274e9369ea 283 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 21 36 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_18705 bf11ac37c796f0af12f704274e9369ea 283 Gene3D G3DSA:3.20.20.20 3 280 1.4E-109 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P40_01060 63115847c5cc779dcf0e0d7b63450f8d 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 193 274 1.3E-19 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_01060 63115847c5cc779dcf0e0d7b63450f8d 314 Pfam PF01548 Transposase 10 149 7.6E-22 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_17775 e886933ae110b5fe690d37927fd7eab7 295 Gene3D G3DSA:3.40.190.10 91 289 2.1E-31 T 13-10-2018 P40_17775 e886933ae110b5fe690d37927fd7eab7 295 Pfam PF03466 LysR substrate binding domain 88 290 4.5E-34 T 13-10-2018 IPR005119 LysR, substrate-binding P40_17775 e886933ae110b5fe690d37927fd7eab7 295 SUPERFAMILY SSF46785 1 84 2.88E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_17775 e886933ae110b5fe690d37927fd7eab7 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.6E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_17775 e886933ae110b5fe690d37927fd7eab7 295 SUPERFAMILY SSF53850 89 290 1.81E-29 T 13-10-2018 P40_17775 e886933ae110b5fe690d37927fd7eab7 295 Gene3D G3DSA:3.40.190.10 165 268 2.1E-31 T 13-10-2018 P40_17775 e886933ae110b5fe690d37927fd7eab7 295 Gene3D G3DSA:1.10.10.10 1 83 2.2E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_07650 0887d17ce2e87996afafc96384aa46f8 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 6.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07650 0887d17ce2e87996afafc96384aa46f8 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 6.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07650 0887d17ce2e87996afafc96384aa46f8 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 6.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07650 0887d17ce2e87996afafc96384aa46f8 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_07650 0887d17ce2e87996afafc96384aa46f8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.2E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07650 0887d17ce2e87996afafc96384aa46f8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.2E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07650 0887d17ce2e87996afafc96384aa46f8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.2E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07650 0887d17ce2e87996afafc96384aa46f8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.2E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07650 0887d17ce2e87996afafc96384aa46f8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.2E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07650 0887d17ce2e87996afafc96384aa46f8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.2E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07650 0887d17ce2e87996afafc96384aa46f8 254 Gene3D G3DSA:3.40.50.720 2 254 1.3E-80 T 13-10-2018 P40_07650 0887d17ce2e87996afafc96384aa46f8 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 1.1E-65 T 13-10-2018 P40_07650 0887d17ce2e87996afafc96384aa46f8 254 SUPERFAMILY SSF51735 9 254 1.6E-84 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_21205 600e2d5069653f8f424743a87ac6f315 68 Pfam PF04102 SlyX 3 68 3.5E-20 T 13-10-2018 IPR007236 SlyX P40_21205 600e2d5069653f8f424743a87ac6f315 68 Hamap MF_00715 Protein SlyX [slyX]. 1 68 13.653 T 13-10-2018 IPR007236 SlyX P40_01660 d89283fdc094459e468dd6293392bd13 213 Gene3D G3DSA:3.30.1330.60 40 212 9.9E-38 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_01660 d89283fdc094459e468dd6293392bd13 213 SUPERFAMILY SSF103088 80 202 4.19E-29 T 13-10-2018 IPR036737 OmpA-like domain superfamily P40_01660 d89283fdc094459e468dd6293392bd13 213 Pfam PF00691 OmpA family 91 195 1.2E-17 T 13-10-2018 IPR006665 OmpA-like domain P40_07755 b5cca9413ce08ab2be14b5f66ad6fbc0 385 Pfam PF13609 Gram-negative porin 12 365 9.1E-28 T 13-10-2018 P40_07755 b5cca9413ce08ab2be14b5f66ad6fbc0 385 SUPERFAMILY SSF56935 32 383 4.83E-32 T 13-10-2018 P40_07755 b5cca9413ce08ab2be14b5f66ad6fbc0 385 Gene3D G3DSA:2.40.160.10 40 384 1.5E-15 T 13-10-2018 IPR023614 Porin domain superfamily P40_17890 a4aec2a5d96300b1ff0d6e904b7997dc 173 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 2.3E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_17890 a4aec2a5d96300b1ff0d6e904b7997dc 173 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 8 144 1.3E-26 T 13-10-2018 IPR013362 Pilus modification type IV, PilV P40_17335 4f2f3af465d0bff10d7e8d2ea5b3c006 269 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 22 234 3.2E-61 T 13-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 P40_17335 4f2f3af465d0bff10d7e8d2ea5b3c006 269 Pfam PF08900 Domain of unknown function (DUF1845) 21 233 5.2E-65 T 13-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 P40_11305 aa2184e33336bbac2ae37ab35d4e6ee2 272 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 271 74.063 T 13-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein P40_11305 aa2184e33336bbac2ae37ab35d4e6ee2 272 Pfam PF03618 Kinase/pyrophosphorylase 6 262 2.4E-74 T 13-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 P40_17160 95b87a88093beb7cf487f49eb7990b3e 391 SUPERFAMILY SSF81901 325 383 1.83E-7 T 13-10-2018 P40_17160 95b87a88093beb7cf487f49eb7990b3e 391 Gene3D G3DSA:1.25.40.10 71 386 1.1E-50 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_17160 95b87a88093beb7cf487f49eb7990b3e 391 SMART SM00671 340 375 6.7E-4 T 13-10-2018 IPR006597 Sel1-like repeat P40_17160 95b87a88093beb7cf487f49eb7990b3e 391 SMART SM00671 222 257 2.1 T 13-10-2018 IPR006597 Sel1-like repeat P40_17160 95b87a88093beb7cf487f49eb7990b3e 391 SMART SM00671 110 146 0.053 T 13-10-2018 IPR006597 Sel1-like repeat P40_17160 95b87a88093beb7cf487f49eb7990b3e 391 SMART SM00671 258 293 20.0 T 13-10-2018 IPR006597 Sel1-like repeat P40_17160 95b87a88093beb7cf487f49eb7990b3e 391 SMART SM00671 186 221 2.7E-5 T 13-10-2018 IPR006597 Sel1-like repeat P40_17160 95b87a88093beb7cf487f49eb7990b3e 391 SUPERFAMILY SSF81901 96 303 1.66E-29 T 13-10-2018 P40_17160 95b87a88093beb7cf487f49eb7990b3e 391 Pfam PF08238 Sel1 repeat 224 257 0.23 T 13-10-2018 IPR006597 Sel1-like repeat P40_17160 95b87a88093beb7cf487f49eb7990b3e 391 Pfam PF08238 Sel1 repeat 186 221 8.0E-6 T 13-10-2018 IPR006597 Sel1-like repeat P40_17160 95b87a88093beb7cf487f49eb7990b3e 391 Pfam PF08238 Sel1 repeat 340 370 1.1E-4 T 13-10-2018 IPR006597 Sel1-like repeat P40_17160 95b87a88093beb7cf487f49eb7990b3e 391 Pfam PF08238 Sel1 repeat 260 288 4.1 T 13-10-2018 IPR006597 Sel1-like repeat P40_17160 95b87a88093beb7cf487f49eb7990b3e 391 Pfam PF08238 Sel1 repeat 111 144 0.0029 T 13-10-2018 IPR006597 Sel1-like repeat P40_05235 141a1f7837a05eafe980b5be3ddd6e30 197 Gene3D G3DSA:3.40.30.10 35 196 3.4E-56 T 13-10-2018 P40_05235 141a1f7837a05eafe980b5be3ddd6e30 197 SUPERFAMILY SSF52833 39 197 2.59E-51 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_05235 141a1f7837a05eafe980b5be3ddd6e30 197 Pfam PF02630 SCO1/SenC 24 180 2.7E-42 T 13-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_12330 77ac20f1ecd0beef2b551dce0dd182f9 92 Gene3D G3DSA:1.10.10.1150 1 90 3.9E-27 T 13-10-2018 P40_12330 77ac20f1ecd0beef2b551dce0dd182f9 92 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 27 89 1.8E-16 T 13-10-2018 IPR008792 Coenzyme PQQ synthesis D P40_12330 77ac20f1ecd0beef2b551dce0dd182f9 92 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 4 91 24.888 T 13-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 P40_12330 77ac20f1ecd0beef2b551dce0dd182f9 92 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 10 89 1.3E-35 T 13-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 P40_08100 dbf510fdecee19d75bc31f05c80230a2 319 Gene3D G3DSA:3.30.460.10 7 109 1.2E-7 T 13-10-2018 P40_08100 dbf510fdecee19d75bc31f05c80230a2 319 SUPERFAMILY SSF81301 8 74 1.28E-10 T 13-10-2018 P40_08100 dbf510fdecee19d75bc31f05c80230a2 319 Pfam PF01909 Nucleotidyltransferase domain 31 82 1.7E-8 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 P40_13655 d6ab10d2539ef937fc18c5d9802e75e5 292 Gene3D G3DSA:3.30.470.30 55 155 3.8E-52 T 13-10-2018 P40_13655 d6ab10d2539ef937fc18c5d9802e75e5 292 SUPERFAMILY SSF50249 177 281 3.2E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold P40_13655 d6ab10d2539ef937fc18c5d9802e75e5 292 Pfam PF14743 DNA ligase OB-like domain 216 281 6.0E-29 T 13-10-2018 IPR029319 DNA ligase, OB-like domain P40_13655 d6ab10d2539ef937fc18c5d9802e75e5 292 Gene3D G3DSA:3.30.1490.70 36 194 3.8E-52 T 13-10-2018 P40_13655 d6ab10d2539ef937fc18c5d9802e75e5 292 Gene3D G3DSA:2.40.50.140 214 284 3.6E-9 T 13-10-2018 P40_13655 d6ab10d2539ef937fc18c5d9802e75e5 292 SUPERFAMILY SSF56091 35 202 3.06E-37 T 13-10-2018 P40_04755 cfa871a3ac5f4eaaeffab8837055acfd 186 SUPERFAMILY SSF52172 14 129 8.4E-25 T 13-10-2018 IPR011006 CheY-like superfamily P40_04755 cfa871a3ac5f4eaaeffab8837055acfd 186 SUPERFAMILY SSF46689 122 182 1.4E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_04755 cfa871a3ac5f4eaaeffab8837055acfd 186 SMART SM00448 13 125 8.6E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04755 cfa871a3ac5f4eaaeffab8837055acfd 186 Pfam PF00072 Response regulator receiver domain 16 124 1.9E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P40_04755 cfa871a3ac5f4eaaeffab8837055acfd 186 Pfam PF02954 Bacterial regulatory protein, Fis family 144 182 5.0E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_04755 cfa871a3ac5f4eaaeffab8837055acfd 186 Gene3D G3DSA:1.10.10.60 129 184 3.5E-19 T 13-10-2018 P40_04755 cfa871a3ac5f4eaaeffab8837055acfd 186 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 149 166 1.9E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_04755 cfa871a3ac5f4eaaeffab8837055acfd 186 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 166 186 1.9E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P40_04755 cfa871a3ac5f4eaaeffab8837055acfd 186 Gene3D G3DSA:3.40.50.2300 14 128 5.7E-24 T 13-10-2018 P40_07690 b9992c58657d9ffc838257cd00defd96 269 SUPERFAMILY SSF46785 20 92 6.34E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_07690 b9992c58657d9ffc838257cd00defd96 269 Gene3D G3DSA:1.10.10.10 12 91 3.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_07690 b9992c58657d9ffc838257cd00defd96 269 Pfam PF09339 IclR helix-turn-helix domain 22 71 1.2E-15 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 P40_07690 b9992c58657d9ffc838257cd00defd96 269 SMART SM00346 20 110 2.5E-24 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 P40_07690 b9992c58657d9ffc838257cd00defd96 269 SUPERFAMILY SSF55781 87 265 5.82E-34 T 13-10-2018 P40_07690 b9992c58657d9ffc838257cd00defd96 269 Pfam PF01614 Bacterial transcriptional regulator 141 255 1.5E-7 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal P40_07690 b9992c58657d9ffc838257cd00defd96 269 Gene3D G3DSA:3.30.450.40 94 262 1.5E-29 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_11480 83926fca75b2ecb3f494b794d5088a02 72 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 2.5E-17 T 13-10-2018 IPR012451 Protein of unknown function DUF1656 P40_11155 b7bc1fa297cad171e3583d525bbedcf9 99 SUPERFAMILY SSF54909 1 97 3.75E-30 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_11155 b7bc1fa297cad171e3583d525bbedcf9 99 Pfam PF03795 YCII-related domain 1 95 4.7E-27 T 13-10-2018 IPR005545 YCII-related P40_11155 b7bc1fa297cad171e3583d525bbedcf9 99 Gene3D G3DSA:3.30.70.1060 1 98 3.6E-35 T 13-10-2018 P40_18070 84480bc4c73cab131ae8003c8b9306e2 238 Pfam PF01203 Type II secretion system (T2SS), protein N 41 192 3.0E-18 T 13-10-2018 IPR022792 Type II secretion system, protein N P40_05100 c6caa8cfcfb0c9b2911e63bc655edf26 365 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 318 342 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_05100 c6caa8cfcfb0c9b2911e63bc655edf26 365 Pfam PF01098 Cell cycle protein 19 361 1.7E-108 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_05100 c6caa8cfcfb0c9b2911e63bc655edf26 365 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 7 363 26.919 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_05100 c6caa8cfcfb0c9b2911e63bc655edf26 365 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 13 361 2.1E-128 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 P40_03360 ed8565092b44101152127f43dc54ba9d 306 SUPERFAMILY SSF46689 193 244 1.13E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_03360 ed8565092b44101152127f43dc54ba9d 306 Pfam PF12833 Helix-turn-helix domain 216 291 1.3E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_03360 ed8565092b44101152127f43dc54ba9d 306 SUPERFAMILY SSF46689 246 294 1.69E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_03360 ed8565092b44101152127f43dc54ba9d 306 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 181 1.2E-46 T 13-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal P40_03360 ed8565092b44101152127f43dc54ba9d 306 SMART SM00342 210 293 7.5E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_03360 ed8565092b44101152127f43dc54ba9d 306 Gene3D G3DSA:1.10.10.60 193 296 7.3E-25 T 13-10-2018 P40_12025 2d1c67740a53759dca8b8701c6bda1b2 619 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 102 538 3.6E-82 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_12025 2d1c67740a53759dca8b8701c6bda1b2 619 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 18 613 4.9E-150 T 13-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ P40_11260 0315b94e2c4c2ee99050523a5520205f 373 Gene3D G3DSA:3.40.50.1820 61 370 2.1E-23 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_11260 0315b94e2c4c2ee99050523a5520205f 373 SUPERFAMILY SSF53474 64 370 8.44E-34 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_11260 0315b94e2c4c2ee99050523a5520205f 373 Pfam PF00561 alpha/beta hydrolase fold 74 352 6.3E-18 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_09085 760836c0f1c5d9da511b6cbea31b1cfc 225 Gene3D G3DSA:3.30.420.40 4 216 1.1E-72 T 13-10-2018 P40_09085 760836c0f1c5d9da511b6cbea31b1cfc 225 Gene3D G3DSA:3.30.420.40 95 185 1.1E-72 T 13-10-2018 P40_09085 760836c0f1c5d9da511b6cbea31b1cfc 225 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 216 7.8E-60 T 13-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 P40_09085 760836c0f1c5d9da511b6cbea31b1cfc 225 Pfam PF00814 Glycoprotease family 32 151 8.5E-29 T 13-10-2018 IPR000905 Gcp-like domain P40_09085 760836c0f1c5d9da511b6cbea31b1cfc 225 SUPERFAMILY SSF53067 4 103 1.21E-28 T 13-10-2018 P40_09085 760836c0f1c5d9da511b6cbea31b1cfc 225 SUPERFAMILY SSF53067 111 214 1.94E-19 T 13-10-2018 P40_11855 59e2257fbde5ba74d4ef77a7970465d4 536 SUPERFAMILY SSF52096 238 518 3.84E-86 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_11855 59e2257fbde5ba74d4ef77a7970465d4 536 Pfam PF01039 Carboxyl transferase domain 49 526 1.7E-149 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 P40_11855 59e2257fbde5ba74d4ef77a7970465d4 536 SUPERFAMILY SSF52096 27 272 3.7E-71 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_11855 59e2257fbde5ba74d4ef77a7970465d4 536 Gene3D G3DSA:3.90.226.10 274 536 7.0E-104 T 13-10-2018 P40_11855 59e2257fbde5ba74d4ef77a7970465d4 536 Gene3D G3DSA:3.90.226.10 1 273 8.1E-95 T 13-10-2018 P40_17210 bc6b22e0ad37ceddaece7ac412d37192 392 SMART SM01329 3 387 1.6E-127 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 P40_17210 bc6b22e0ad37ceddaece7ac412d37192 392 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 188 1.8E-30 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 P40_17210 bc6b22e0ad37ceddaece7ac412d37192 392 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 205 343 5.1E-41 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 P40_17210 bc6b22e0ad37ceddaece7ac412d37192 392 SUPERFAMILY SSF53659 3 343 5.94E-92 T 13-10-2018 P40_17210 bc6b22e0ad37ceddaece7ac412d37192 392 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 268 287 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 P40_17210 bc6b22e0ad37ceddaece7ac412d37192 392 Gene3D G3DSA:3.40.718.10 1 392 4.3E-107 T 13-10-2018 P40_12145 ee358828f818ab201dd6129332a33bcf 166 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 145 1.4E-7 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel P40_13190 6691eba7d6211cce8ab338a95282ef48 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site P40_13190 6691eba7d6211cce8ab338a95282ef48 77 SUPERFAMILY SSF47336 2 76 5.23E-24 T 13-10-2018 IPR036736 ACP-like superfamily P40_13190 6691eba7d6211cce8ab338a95282ef48 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 2.9E-37 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 P40_13190 6691eba7d6211cce8ab338a95282ef48 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.575 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 P40_13190 6691eba7d6211cce8ab338a95282ef48 77 Gene3D G3DSA:1.10.1200.10 1 75 4.2E-30 T 13-10-2018 IPR036736 ACP-like superfamily P40_13190 6691eba7d6211cce8ab338a95282ef48 77 SMART SM00823 Phosphopantetheine attachment site 5 77 0.0083 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 P40_13190 6691eba7d6211cce8ab338a95282ef48 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.4E-16 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain P40_17455 71f600451aaa790dc798329d29ff617f 143 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 39 123 1.2E-24 T 13-10-2018 IPR019110 Uncharacterised protein family, RAQPRD P40_00865 aa98072858be2cf64414fd10c06de48b 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 425 1.3E-77 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_00865 aa98072858be2cf64414fd10c06de48b 435 PIRSF PIRSF006066 8 435 1.1E-75 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_15190 a6ae7e5142e756fe6e22a4093970ede7 375 PIRSF PIRSF004810 1 375 6.1E-99 T 13-10-2018 IPR014047 Chromate transporter, long chain P40_15190 a6ae7e5142e756fe6e22a4093970ede7 375 Pfam PF02417 Chromate transporter 209 371 1.3E-27 T 13-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 P40_15190 a6ae7e5142e756fe6e22a4093970ede7 375 Pfam PF02417 Chromate transporter 4 169 2.9E-33 T 13-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 P40_15190 a6ae7e5142e756fe6e22a4093970ede7 375 TIGRFAM TIGR00937 2A51: chromate efflux transporter 10 366 1.0E-80 T 13-10-2018 IPR014047 Chromate transporter, long chain P40_05030 0785eea9113a29682e6acf816d1a4abc 229 Pfam PF01618 MotA/TolQ/ExbB proton channel family 76 193 6.0E-29 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel P40_09600 2ce0208615edd358d0b30f7565d4cea7 93 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 68 3.6E-16 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain P40_09600 2ce0208615edd358d0b30f7565d4cea7 93 Gene3D G3DSA:3.30.70.100 4 93 1.3E-22 T 13-10-2018 P40_09600 2ce0208615edd358d0b30f7565d4cea7 93 SUPERFAMILY SSF54909 1 90 2.81E-20 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_04310 5c8f4becd9181911b55bf34f5d929d56 257 Gene3D G3DSA:3.40.50.720 4 241 2.0E-61 T 13-10-2018 P40_04310 5c8f4becd9181911b55bf34f5d929d56 257 SUPERFAMILY SSF51735 4 249 1.51E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_04310 5c8f4becd9181911b55bf34f5d929d56 257 Pfam PF00106 short chain dehydrogenase 7 191 4.7E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04310 5c8f4becd9181911b55bf34f5d929d56 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.2E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04310 5c8f4becd9181911b55bf34f5d929d56 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.2E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04310 5c8f4becd9181911b55bf34f5d929d56 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.2E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04310 5c8f4becd9181911b55bf34f5d929d56 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.2E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04310 5c8f4becd9181911b55bf34f5d929d56 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.2E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04310 5c8f4becd9181911b55bf34f5d929d56 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 171 8.9E-5 T 13-10-2018 P40_04310 5c8f4becd9181911b55bf34f5d929d56 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.4E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04310 5c8f4becd9181911b55bf34f5d929d56 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.4E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04310 5c8f4becd9181911b55bf34f5d929d56 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.4E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_00610 3d02d02ce15abc25eedfb85443273dd0 354 SUPERFAMILY SSF47203 193 332 2.09E-26 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 P40_00610 3d02d02ce15abc25eedfb85443273dd0 354 Gene3D G3DSA:1.10.540.10 5 94 1.6E-5 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 P40_00610 3d02d02ce15abc25eedfb85443273dd0 354 Gene3D G3DSA:2.40.110.10 96 191 5.3E-6 T 13-10-2018 P40_00610 3d02d02ce15abc25eedfb85443273dd0 354 Gene3D G3DSA:1.20.140.10 192 334 6.1E-23 T 13-10-2018 P40_00610 3d02d02ce15abc25eedfb85443273dd0 354 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 193 308 8.7E-17 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 P40_00610 3d02d02ce15abc25eedfb85443273dd0 354 SUPERFAMILY SSF56645 7 159 8.4E-13 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_09845 2865ee86ddf12f1e2b157f21143d02ab 347 Pfam PF16169 Domain of unknown function (DUF4872) 160 341 3.2E-46 T 13-10-2018 IPR032369 Domain of unknown function DUF4872 P40_09845 2865ee86ddf12f1e2b157f21143d02ab 347 Pfam PF14399 Butirosin biosynthesis protein H, N-terminal 16 149 3.5E-46 T 13-10-2018 IPR026935 Butirosin biosynthesis protein H, N-terminal KEGG: 00524+2.3.2.19|MetaCyc: PWY-7019 P40_08515 fa7b3775b0644fe3f8b29a937d35ef32 312 Gene3D G3DSA:3.40.190.10 162 263 1.8E-72 T 13-10-2018 P40_08515 fa7b3775b0644fe3f8b29a937d35ef32 312 SUPERFAMILY SSF46785 5 111 4.46E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_08515 fa7b3775b0644fe3f8b29a937d35ef32 312 SUPERFAMILY SSF53850 89 294 3.98E-47 T 13-10-2018 P40_08515 fa7b3775b0644fe3f8b29a937d35ef32 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 7.8E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_08515 fa7b3775b0644fe3f8b29a937d35ef32 312 Gene3D G3DSA:1.10.10.10 1 88 5.8E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_08515 fa7b3775b0644fe3f8b29a937d35ef32 312 Pfam PF03466 LysR substrate binding domain 87 291 1.2E-45 T 13-10-2018 IPR005119 LysR, substrate-binding P40_08515 fa7b3775b0644fe3f8b29a937d35ef32 312 Gene3D G3DSA:3.40.190.10 90 289 1.8E-72 T 13-10-2018 P40_19070 0389c655fb4719969b1b4e4e1a829ee8 317 Gene3D G3DSA:3.40.190.290 96 308 7.9E-33 T 13-10-2018 P40_19070 0389c655fb4719969b1b4e4e1a829ee8 317 Pfam PF03466 LysR substrate binding domain 95 300 5.5E-33 T 13-10-2018 IPR005119 LysR, substrate-binding P40_19070 0389c655fb4719969b1b4e4e1a829ee8 317 SUPERFAMILY SSF53850 96 303 9.15E-34 T 13-10-2018 P40_19070 0389c655fb4719969b1b4e4e1a829ee8 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 68 8.5E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_19070 0389c655fb4719969b1b4e4e1a829ee8 317 Gene3D G3DSA:1.10.10.10 8 94 2.4E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_19070 0389c655fb4719969b1b4e4e1a829ee8 317 SUPERFAMILY SSF46785 7 116 1.41E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_09165 0c2dec944048ffd918ddc904e6969582 260 SUPERFAMILY SSF53633 16 248 7.72E-67 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily P40_09165 0c2dec944048ffd918ddc904e6969582 260 Gene3D G3DSA:3.40.1160.10 8 255 1.2E-70 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily P40_09165 0c2dec944048ffd918ddc904e6969582 260 PIRSF PIRSF005650 13 259 3.7E-87 T 13-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 P40_09165 0c2dec944048ffd918ddc904e6969582 260 Pfam PF00696 Amino acid kinase family 19 228 6.1E-25 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 P40_09165 0c2dec944048ffd918ddc904e6969582 260 Hamap MF_01220_B Uridylate kinase [pyrH]. 16 249 43.219 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 P40_09165 0c2dec944048ffd918ddc904e6969582 260 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 18 248 3.3E-97 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 P40_17960 4ba78aaca8cb4966314b34938dbefb50 197 Pfam PF03923 Uncharacterized lipoprotein 28 187 2.6E-35 T 13-10-2018 IPR005619 Uncharacterised protein family, YajG P40_11885 ca4b9fd03188c82599ada485872c3819 143 Gene3D G3DSA:3.10.129.10 2 143 3.9E-43 T 13-10-2018 P40_11885 ca4b9fd03188c82599ada485872c3819 143 SUPERFAMILY SSF54637 13 141 6.67E-35 T 13-10-2018 IPR029069 HotDog domain superfamily P40_11885 ca4b9fd03188c82599ada485872c3819 143 Pfam PF03061 Thioesterase superfamily 29 107 4.3E-9 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_06255 c820f5acf7f73a1eb8218360c1fcb166 208 SUPERFAMILY SSF53335 9 196 2.63E-49 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_06255 c820f5acf7f73a1eb8218360c1fcb166 208 Gene3D G3DSA:3.40.50.150 3 207 8.0E-49 T 13-10-2018 P40_06255 c820f5acf7f73a1eb8218360c1fcb166 208 Pfam PF08241 Methyltransferase domain 46 140 1.2E-25 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 P40_00185 9b6a59668353efcb199eaff4f3056550 122 Gene3D G3DSA:1.10.1660.10 1 121 1.3E-31 T 13-10-2018 P40_00185 9b6a59668353efcb199eaff4f3056550 122 SMART SM00422 1 70 9.4E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_00185 9b6a59668353efcb199eaff4f3056550 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 6.6E-9 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_00185 9b6a59668353efcb199eaff4f3056550 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.6E-9 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_00185 9b6a59668353efcb199eaff4f3056550 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.6E-9 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_00185 9b6a59668353efcb199eaff4f3056550 122 SUPERFAMILY SSF46955 2 110 1.87E-29 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily P40_00185 9b6a59668353efcb199eaff4f3056550 122 Pfam PF13411 MerR HTH family regulatory protein 2 69 2.3E-19 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P40_13295 019adb719a6535bf5a745a923fb858f7 188 Pfam PF04315 Elongation factor P hydroxylase 10 168 1.7E-60 T 13-10-2018 IPR007411 Elongation factor P hydroxylase P40_11170 def48d0cdbecfa37e19635f16a95d3c1 393 Gene3D G3DSA:3.40.50.10540 4 386 4.8E-117 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_11170 def48d0cdbecfa37e19635f16a95d3c1 393 Pfam PF02515 CoA-transferase family III 5 369 1.5E-103 T 13-10-2018 IPR003673 CoA-transferase family III GO:0003824 P40_11170 def48d0cdbecfa37e19635f16a95d3c1 393 Gene3D G3DSA:3.30.1540.10 227 321 4.8E-117 T 13-10-2018 P40_11170 def48d0cdbecfa37e19635f16a95d3c1 393 SUPERFAMILY SSF89796 1 392 2.88E-127 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_05605 470f0c93c805a1998db21b37c9f1dae3 139 Gene3D G3DSA:2.60.40.790 3 138 1.7E-40 T 13-10-2018 IPR008978 HSP20-like chaperone P40_05605 470f0c93c805a1998db21b37c9f1dae3 139 Pfam PF00011 Hsp20/alpha crystallin family 37 138 3.2E-24 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain P40_05605 470f0c93c805a1998db21b37c9f1dae3 139 SUPERFAMILY SSF49764 19 138 2.51E-40 T 13-10-2018 IPR008978 HSP20-like chaperone P40_13150 90170687a54dddc970f509f149cbd6d1 446 Pfam PF02646 RmuC family 131 425 2.1E-102 T 13-10-2018 IPR003798 DNA recombination RmuC P40_00690 6b98c4c7d02c796f45a299866bfcb610 677 Gene3D G3DSA:1.10.1370.40 14 672 2.9E-263 T 13-10-2018 P40_00690 6b98c4c7d02c796f45a299866bfcb610 677 SUPERFAMILY SSF55486 2 674 2.34E-198 T 13-10-2018 P40_00690 6b98c4c7d02c796f45a299866bfcb610 677 Gene3D G3DSA:1.10.1370.10 140 607 2.9E-263 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 P40_00690 6b98c4c7d02c796f45a299866bfcb610 677 Pfam PF01432 Peptidase family M3 222 674 5.7E-153 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 P40_07360 0ab27125fa68bd1a9db2208726ac154c 152 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 141 33.044 T 13-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 P40_07360 0ab27125fa68bd1a9db2208726ac154c 152 Pfam PF03100 CcmE 5 131 4.6E-47 T 13-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 P40_07360 0ab27125fa68bd1a9db2208726ac154c 152 SUPERFAMILY SSF82093 30 137 2.22E-40 T 13-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 P40_07360 0ab27125fa68bd1a9db2208726ac154c 152 Gene3D G3DSA:2.40.50.140 30 137 9.0E-41 T 13-10-2018 P40_11695 eafbfff9bc3aa31f9ab7feb339c6bb8f 151 Pfam PF05425 Copper resistance protein D 46 147 4.1E-17 T 13-10-2018 IPR008457 Copper resistance protein D GO:0016021 P40_00050 e69058f4df65bdc15a79462fdb7499c9 147 Gene3D G3DSA:3.10.450.50 15 133 1.1E-9 T 13-10-2018 P40_00050 e69058f4df65bdc15a79462fdb7499c9 147 SUPERFAMILY SSF54427 20 138 6.36E-15 T 13-10-2018 IPR032710 NTF2-like domain superfamily P40_12570 836a87ff6d2a1d35f9a3c018d61e0b0f 438 SUPERFAMILY SSF56935 50 435 3.39E-9 T 13-10-2018 P40_12570 836a87ff6d2a1d35f9a3c018d61e0b0f 438 Gene3D G3DSA:2.40.160.60 243 438 3.8E-13 T 13-10-2018 P40_12355 25026ea95112e4dbbf6cc89cb7454b80 147 ProSitePatterns PS00934 Glyoxalase I signature 1. 21 41 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 P40_12355 25026ea95112e4dbbf6cc89cb7454b80 147 SUPERFAMILY SSF54593 17 144 2.34E-24 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_12355 25026ea95112e4dbbf6cc89cb7454b80 147 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 139 1.1E-11 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain P40_12355 25026ea95112e4dbbf6cc89cb7454b80 147 Gene3D G3DSA:3.10.180.10 14 143 9.5E-22 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_01615 92badb229f1b6d1d747773e5719f8f80 92 Pfam PF03992 Antibiotic biosynthesis monooxygenase 8 70 8.2E-11 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain P40_01615 92badb229f1b6d1d747773e5719f8f80 92 Gene3D G3DSA:3.30.70.100 4 91 4.3E-14 T 13-10-2018 P40_01615 92badb229f1b6d1d747773e5719f8f80 92 SUPERFAMILY SSF54909 4 79 8.26E-17 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_18635 b749ba0bc10be25bf70eb11a7b8b9290 150 SUPERFAMILY SSF54637 3 145 2.06E-33 T 13-10-2018 IPR029069 HotDog domain superfamily P40_18635 b749ba0bc10be25bf70eb11a7b8b9290 150 Pfam PF01575 MaoC like domain 13 117 1.8E-21 T 13-10-2018 IPR002539 MaoC-like dehydratase domain P40_18635 b749ba0bc10be25bf70eb11a7b8b9290 150 Gene3D G3DSA:3.10.129.10 1 150 5.2E-40 T 13-10-2018 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 Gene3D G3DSA:3.30.390.30 344 464 8.8E-29 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 SUPERFAMILY SSF55424 343 463 1.03E-27 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PIRSF PIRSF000350 2 464 3.5E-61 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 456 1.7E-25 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 326 5.7E-57 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 1.8E-51 T 13-10-2018 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 1.8E-51 T 13-10-2018 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.8E-51 T 13-10-2018 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.8E-51 T 13-10-2018 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 1.8E-51 T 13-10-2018 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 1.8E-51 T 13-10-2018 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.8E-51 T 13-10-2018 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.8E-51 T 13-10-2018 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.8E-51 T 13-10-2018 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 SUPERFAMILY SSF51905 2 333 8.48E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 Gene3D G3DSA:3.50.50.60 7 328 1.9E-87 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 Gene3D G3DSA:3.50.50.60 151 269 1.9E-87 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.0E-28 T 13-10-2018 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 8.0E-28 T 13-10-2018 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 8.0E-28 T 13-10-2018 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 8.0E-28 T 13-10-2018 P40_13555 e504d388b8bab7cdb559ddd6c880d109 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 8.0E-28 T 13-10-2018 P40_02160 ed64b6cbd1034f2b0ae1a8354be303e1 266 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 138 150 - T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 P40_02160 ed64b6cbd1034f2b0ae1a8354be303e1 266 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 255 7.7E-81 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 P40_02160 ed64b6cbd1034f2b0ae1a8354be303e1 266 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 261 9.7E-81 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 P40_02160 ed64b6cbd1034f2b0ae1a8354be303e1 266 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 260 19.931 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 P40_05345 695dddf0ca1b23eba2d875b448115a44 587 Gene3D G3DSA:3.30.2010.10 96 187 2.8E-28 T 13-10-2018 P40_05345 695dddf0ca1b23eba2d875b448115a44 587 Pfam PF01435 Peptidase family M48 106 317 3.7E-25 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 P40_05345 695dddf0ca1b23eba2d875b448115a44 587 SUPERFAMILY SSF158682 525 576 3.4E-5 T 13-10-2018 IPR029024 TerB-like P40_04730 8c2a28f223a457262991b2b0a8867003 667 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 66 514 5.9E-138 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 57 82 7.9E-93 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 208 226 7.9E-93 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 107 130 7.9E-93 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 134 158 7.9E-93 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 421 440 7.9E-93 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 309 7.9E-93 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 393 411 7.9E-93 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 379 7.9E-93 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 188 7.9E-93 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 237 256 7.9E-93 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 334 349 7.9E-93 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 471 492 7.9E-93 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 290 344 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 SUPERFAMILY SSF81442 53 569 4.97E-180 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 Gene3D G3DSA:1.20.210.10 41 573 3.0E-191 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_04730 8c2a28f223a457262991b2b0a8867003 667 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 12 656 0.0 T 13-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 P40_09685 a2f18c3b4b3a1e60e05d2030281c5e41 523 Pfam PF13193 AMP-binding enzyme C-terminal domain 429 504 2.0E-21 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_09685 a2f18c3b4b3a1e60e05d2030281c5e41 523 Gene3D G3DSA:3.40.50.12780 1 413 1.5E-122 T 13-10-2018 P40_09685 a2f18c3b4b3a1e60e05d2030281c5e41 523 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_09685 a2f18c3b4b3a1e60e05d2030281c5e41 523 Pfam PF00501 AMP-binding enzyme 8 420 4.6E-102 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_09685 a2f18c3b4b3a1e60e05d2030281c5e41 523 Gene3D G3DSA:3.30.300.310 416 518 9.3E-35 T 13-10-2018 P40_09685 a2f18c3b4b3a1e60e05d2030281c5e41 523 SUPERFAMILY SSF56801 3 516 7.06E-158 T 13-10-2018 P40_03850 4aaafa417bbf702649e73eb74b9189e3 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 116 1.3E-14 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain P40_03850 4aaafa417bbf702649e73eb74b9189e3 146 Gene3D G3DSA:3.10.180.10 7 143 7.3E-35 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_03850 4aaafa417bbf702649e73eb74b9189e3 146 SUPERFAMILY SSF54593 7 130 4.95E-29 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_17860 1478395fa18545cb3e63b89de8a8657d 361 SUPERFAMILY SSF54373 215 300 6.28E-16 T 13-10-2018 P40_17860 1478395fa18545cb3e63b89de8a8657d 361 SUPERFAMILY SSF51905 1 355 2.72E-34 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_17860 1478395fa18545cb3e63b89de8a8657d 361 Gene3D G3DSA:3.50.50.60 5 341 1.2E-63 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_17860 1478395fa18545cb3e63b89de8a8657d 361 Gene3D G3DSA:3.30.9.10 90 301 1.2E-63 T 13-10-2018 P40_17860 1478395fa18545cb3e63b89de8a8657d 361 Pfam PF01266 FAD dependent oxidoreductase 3 341 1.8E-45 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 P40_08880 7dcfda2703e1fdfa599d149b52ae1e25 411 Pfam PF02687 FtsX-like permease family 300 404 1.1E-14 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 P40_08880 7dcfda2703e1fdfa599d149b52ae1e25 411 Pfam PF12704 MacB-like periplasmic core domain 27 230 7.3E-20 T 13-10-2018 IPR025857 MacB-like periplasmic core domain P40_08880 7dcfda2703e1fdfa599d149b52ae1e25 411 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 411 1.0E-149 T 13-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 P40_11800 38f30af5c0a7bb0511b3fd6e73859f41 311 Hamap MF_00469 UPF0176 protein YceA [yceA]. 3 255 45.309 T 13-10-2018 IPR020936 Uncharacterised protein family UPF0176 P40_11800 38f30af5c0a7bb0511b3fd6e73859f41 311 SMART SM00450 114 215 3.7E-22 T 13-10-2018 IPR001763 Rhodanese-like domain P40_11800 38f30af5c0a7bb0511b3fd6e73859f41 311 SUPERFAMILY SSF52821 96 245 1.65E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_11800 38f30af5c0a7bb0511b3fd6e73859f41 311 Gene3D G3DSA:3.30.70.100 1 97 3.8E-34 T 13-10-2018 P40_11800 38f30af5c0a7bb0511b3fd6e73859f41 311 Pfam PF00581 Rhodanese-like domain 121 211 4.8E-9 T 13-10-2018 IPR001763 Rhodanese-like domain P40_11800 38f30af5c0a7bb0511b3fd6e73859f41 311 Gene3D G3DSA:3.40.250.10 98 251 2.3E-51 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_07670 ad83c4353559eee8670c0cf6e4a3c591 326 Pfam PF00795 Carbon-nitrogen hydrolase 4 282 3.5E-44 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 P40_07670 ad83c4353559eee8670c0cf6e4a3c591 326 Gene3D G3DSA:3.60.110.10 1 287 2.6E-96 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P40_07670 ad83c4353559eee8670c0cf6e4a3c591 326 SUPERFAMILY SSF56317 3 302 1.15E-70 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P40_06370 19d312509f7d63ff1ffbb184e45a7a97 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site P40_06370 19d312509f7d63ff1ffbb184e45a7a97 210 Gene3D G3DSA:1.10.357.10 73 198 5.5E-33 T 13-10-2018 P40_06370 19d312509f7d63ff1ffbb184e45a7a97 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 9.3E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_06370 19d312509f7d63ff1ffbb184e45a7a97 210 Gene3D G3DSA:1.10.10.60 1 68 1.4E-29 T 13-10-2018 P40_06370 19d312509f7d63ff1ffbb184e45a7a97 210 SUPERFAMILY SSF46689 2 85 2.31E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_06370 19d312509f7d63ff1ffbb184e45a7a97 210 SUPERFAMILY SSF48498 82 195 1.01E-27 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily P40_21625 1325bf9a853030be1ca59ca346043b6d 809 Gene3D G3DSA:3.60.10.10 453 764 2.7E-33 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily P40_21625 1325bf9a853030be1ca59ca346043b6d 809 SUPERFAMILY SSF56219 453 763 2.3E-35 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily P40_21625 1325bf9a853030be1ca59ca346043b6d 809 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 458 756 1.5E-9 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase P40_21625 1325bf9a853030be1ca59ca346043b6d 809 Pfam PF00932 Lamin Tail Domain 16 122 2.6E-15 T 13-10-2018 IPR001322 Lamin tail domain P40_00965 90f28ac1ca8fcf93c2902e067e53ae04 390 Pfam PF00263 Bacterial type II and III secretion system protein 186 346 2.3E-40 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 P40_00965 90f28ac1ca8fcf93c2902e067e53ae04 390 Pfam PF13629 Pilus formation protein N terminal region 31 98 3.6E-16 T 13-10-2018 IPR032789 Pilus formation protein, N-terminal P40_00965 90f28ac1ca8fcf93c2902e067e53ae04 390 PRINTS PR00811 Bacterial general secretion pathway protein D signature 334 348 1.2E-10 T 13-10-2018 IPR001775 GspD/PilQ family P40_00965 90f28ac1ca8fcf93c2902e067e53ae04 390 PRINTS PR00811 Bacterial general secretion pathway protein D signature 311 329 1.2E-10 T 13-10-2018 IPR001775 GspD/PilQ family P40_00965 90f28ac1ca8fcf93c2902e067e53ae04 390 PRINTS PR00811 Bacterial general secretion pathway protein D signature 182 206 1.2E-10 T 13-10-2018 IPR001775 GspD/PilQ family P40_00965 90f28ac1ca8fcf93c2902e067e53ae04 390 PRINTS PR00811 Bacterial general secretion pathway protein D signature 111 121 1.2E-10 T 13-10-2018 IPR001775 GspD/PilQ family P40_11755 13d1f3944a39fc47a631bc757a834a2b 278 SUPERFAMILY SSF53335 36 212 1.08E-32 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_11755 13d1f3944a39fc47a631bc757a834a2b 278 Gene3D G3DSA:3.40.50.150 30 275 6.0E-34 T 13-10-2018 P40_11755 13d1f3944a39fc47a631bc757a834a2b 278 Pfam PF13649 Methyltransferase domain 48 143 5.9E-15 T 13-10-2018 P40_07295 5306b1cfece42ac7019061ba30dc4e03 454 Gene3D G3DSA:3.40.190.10 120 437 2.7E-142 T 13-10-2018 P40_07295 5306b1cfece42ac7019061ba30dc4e03 454 SUPERFAMILY SSF53850 32 296 5.79E-22 T 13-10-2018 P40_07295 5306b1cfece42ac7019061ba30dc4e03 454 Gene3D G3DSA:3.40.190.10 35 432 2.7E-142 T 13-10-2018 P40_07295 5306b1cfece42ac7019061ba30dc4e03 454 Pfam PF13379 NMT1-like family 29 308 4.7E-107 T 13-10-2018 P40_07465 23edf70e55946abd59db13082b26f16e 105 Gene3D G3DSA:1.10.10.60 10 91 1.7E-11 T 13-10-2018 P40_07465 23edf70e55946abd59db13082b26f16e 105 Pfam PF01527 Transposase 4 83 1.2E-13 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 P40_07465 23edf70e55946abd59db13082b26f16e 105 SUPERFAMILY SSF46689 6 102 8.42E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_13180 13d11bb6d3f3581d8f37b4752d0bd68b 262 ProSitePatterns PS00770 Aminotransferases class-IV signature. 164 193 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 P40_13180 13d11bb6d3f3581d8f37b4752d0bd68b 262 Gene3D G3DSA:3.20.10.10 105 261 1.7E-42 T 13-10-2018 P40_13180 13d11bb6d3f3581d8f37b4752d0bd68b 262 Pfam PF01063 Amino-transferase class IV 14 237 6.5E-42 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 P40_13180 13d11bb6d3f3581d8f37b4752d0bd68b 262 Gene3D G3DSA:3.30.470.10 1 102 3.2E-24 T 13-10-2018 P40_13180 13d11bb6d3f3581d8f37b4752d0bd68b 262 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 2 250 6.1E-60 T 13-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 P40_13180 13d11bb6d3f3581d8f37b4752d0bd68b 262 SUPERFAMILY SSF56752 2 255 1.83E-59 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 P40_20150 47f40b9fa58c1bab36d3ec1b4dd6a710 307 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 7 271 8.4E-59 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 P40_20150 47f40b9fa58c1bab36d3ec1b4dd6a710 307 Pfam PF03186 CobD/Cbib protein 7 283 7.1E-93 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 P40_20150 47f40b9fa58c1bab36d3ec1b4dd6a710 307 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 305 104.767 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 P40_09275 76cc4c3e44b64dc4d66d79c281b46674 329 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 1 148 4.1E-37 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_09275 76cc4c3e44b64dc4d66d79c281b46674 329 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 169 314 3.1E-18 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_09275 76cc4c3e44b64dc4d66d79c281b46674 329 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 1 320 22.603 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_09275 76cc4c3e44b64dc4d66d79c281b46674 329 Gene3D G3DSA:3.30.2340.10 147 280 2.2E-106 T 13-10-2018 P40_09275 76cc4c3e44b64dc4d66d79c281b46674 329 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 58 71 - T 13-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 P40_09275 76cc4c3e44b64dc4d66d79c281b46674 329 SUPERFAMILY SSF55120 2 317 4.03E-79 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 P40_09275 76cc4c3e44b64dc4d66d79c281b46674 329 Gene3D G3DSA:3.30.2350.20 1 315 2.2E-106 T 13-10-2018 P40_15445 e9b054eb82a9a19c0860348ef91a3806 266 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 243 1.7E-67 T 13-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 P40_15445 e9b054eb82a9a19c0860348ef91a3806 266 SUPERFAMILY SSF51621 2 254 9.77E-86 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 P40_15445 e9b054eb82a9a19c0860348ef91a3806 266 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 254 1.3E-124 T 13-10-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 P40_15445 e9b054eb82a9a19c0860348ef91a3806 266 Gene3D G3DSA:3.20.20.60 2 263 2.0E-94 T 13-10-2018 P40_01650 dc66d5d7f83c26df53ccc86cfe36b431 210 SUPERFAMILY SSF52833 5 85 1.17E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_01650 dc66d5d7f83c26df53ccc86cfe36b431 210 Gene3D G3DSA:3.40.30.10 7 195 7.1E-45 T 13-10-2018 P40_01650 dc66d5d7f83c26df53ccc86cfe36b431 210 Gene3D G3DSA:1.20.1050.10 83 192 7.1E-45 T 13-10-2018 P40_01650 dc66d5d7f83c26df53ccc86cfe36b431 210 Pfam PF13417 Glutathione S-transferase, N-terminal domain 14 80 5.3E-14 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_01650 dc66d5d7f83c26df53ccc86cfe36b431 210 Pfam PF00043 Glutathione S-transferase, C-terminal domain 128 193 1.7E-6 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal P40_01650 dc66d5d7f83c26df53ccc86cfe36b431 210 SUPERFAMILY SSF47616 73 198 1.16E-20 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily P40_18790 97a1f5e1163a07e58d8cdedd873dc4ed 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 68.987 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 P40_18790 97a1f5e1163a07e58d8cdedd873dc4ed 158 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 13-10-2018 IPR020081 SsrA-binding protein, conserved site P40_18790 97a1f5e1163a07e58d8cdedd873dc4ed 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 1.0E-44 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 P40_18790 97a1f5e1163a07e58d8cdedd873dc4ed 158 SUPERFAMILY SSF74982 8 138 4.45E-49 T 13-10-2018 IPR023620 Small protein B P40_18790 97a1f5e1163a07e58d8cdedd873dc4ed 158 Gene3D G3DSA:2.40.280.10 6 134 3.1E-45 T 13-10-2018 IPR023620 Small protein B P40_18790 97a1f5e1163a07e58d8cdedd873dc4ed 158 Pfam PF01668 SmpB protein 14 156 1.5E-55 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 P40_18790 97a1f5e1163a07e58d8cdedd873dc4ed 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 155 2.1E-51 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 P40_13905 bdd889507742038bd4aa04abba0def29 151 SUPERFAMILY SSF54197 4 127 1.01E-35 T 13-10-2018 IPR036265 HIT-like superfamily P40_13905 bdd889507742038bd4aa04abba0def29 151 PRINTS PR00332 Histidine triad family signature 7 23 3.0E-11 T 13-10-2018 IPR001310 Histidine triad (HIT) protein P40_13905 bdd889507742038bd4aa04abba0def29 151 PRINTS PR00332 Histidine triad family signature 28 46 3.0E-11 T 13-10-2018 IPR001310 Histidine triad (HIT) protein P40_13905 bdd889507742038bd4aa04abba0def29 151 PRINTS PR00332 Histidine triad family signature 96 106 3.0E-11 T 13-10-2018 IPR001310 Histidine triad (HIT) protein P40_13905 bdd889507742038bd4aa04abba0def29 151 Pfam PF01230 HIT domain 15 109 1.9E-21 T 13-10-2018 IPR001310 Histidine triad (HIT) protein P40_13905 bdd889507742038bd4aa04abba0def29 151 Gene3D G3DSA:3.30.428.10 1 141 1.6E-38 T 13-10-2018 IPR036265 HIT-like superfamily P40_13905 bdd889507742038bd4aa04abba0def29 151 ProSitePatterns PS00892 HIT domain signature. 89 107 - T 13-10-2018 IPR019808 Histidine triad, conserved site P40_16210 3898e27461ce0e26852a7aea5dc95cb1 728 Pfam PF00884 Sulfatase 38 468 1.6E-34 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 P40_16210 3898e27461ce0e26852a7aea5dc95cb1 728 Gene3D G3DSA:3.40.720.10 249 506 4.3E-27 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 P40_16210 3898e27461ce0e26852a7aea5dc95cb1 728 Gene3D G3DSA:3.40.720.10 36 204 9.0E-34 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 P40_16210 3898e27461ce0e26852a7aea5dc95cb1 728 SUPERFAMILY SSF53649 36 603 7.76E-61 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 P40_05260 e44bb7c737de01f78c0c67458f09a51a 345 Pfam PF00246 Zinc carboxypeptidase 45 249 2.4E-17 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 P40_05260 e44bb7c737de01f78c0c67458f09a51a 345 Gene3D G3DSA:3.40.630.10 1 290 1.7E-31 T 13-10-2018 P40_05260 e44bb7c737de01f78c0c67458f09a51a 345 SUPERFAMILY SSF53187 44 319 1.42E-44 T 13-10-2018 P40_14135 7c7739a5a35ed45d8102dca0bb5c6362 281 SUPERFAMILY SSF46785 1 109 2.08E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_14135 7c7739a5a35ed45d8102dca0bb5c6362 281 Gene3D G3DSA:3.40.190.10 87 174 2.8E-12 T 13-10-2018 P40_14135 7c7739a5a35ed45d8102dca0bb5c6362 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_14135 7c7739a5a35ed45d8102dca0bb5c6362 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_14135 7c7739a5a35ed45d8102dca0bb5c6362 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_14135 7c7739a5a35ed45d8102dca0bb5c6362 281 Gene3D G3DSA:1.10.10.10 1 86 7.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14135 7c7739a5a35ed45d8102dca0bb5c6362 281 SUPERFAMILY SSF53850 89 275 2.17E-21 T 13-10-2018 P40_14135 7c7739a5a35ed45d8102dca0bb5c6362 281 Pfam PF03466 LysR substrate binding domain 90 270 1.3E-17 T 13-10-2018 IPR005119 LysR, substrate-binding P40_14135 7c7739a5a35ed45d8102dca0bb5c6362 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.2E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_13170 9844443c41b66d54d65a9727ecc93547 208 SUPERFAMILY SSF52540 1 203 9.23E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_13170 9844443c41b66d54d65a9727ecc93547 208 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 195 7.9E-55 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 P40_13170 9844443c41b66d54d65a9727ecc93547 208 Gene3D G3DSA:3.40.50.300 1 206 9.7E-66 T 13-10-2018 P40_13170 9844443c41b66d54d65a9727ecc93547 208 Hamap MF_00165 Thymidylate kinase [tmk]. 4 205 29.939 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 P40_13170 9844443c41b66d54d65a9727ecc93547 208 Pfam PF02223 Thymidylate kinase 8 195 8.5E-52 T 13-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 P40_01130 faa17dcfcedfcc1fbd65d547e9173cb1 259 Gene3D G3DSA:3.20.20.70 1 258 1.6E-119 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_01130 faa17dcfcedfcc1fbd65d547e9173cb1 259 SUPERFAMILY SSF110399 3 245 2.75E-90 T 13-10-2018 P40_01130 faa17dcfcedfcc1fbd65d547e9173cb1 259 Pfam PF05690 Thiazole biosynthesis protein ThiG 7 253 1.3E-109 T 13-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 P40_01130 faa17dcfcedfcc1fbd65d547e9173cb1 259 Hamap MF_00443 Thiazole synthase [thiG]. 4 259 41.987 T 13-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 P40_17700 185ecb063237bbf995edcda2c0b74376 353 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 351 8.2E-54 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 P40_17700 185ecb063237bbf995edcda2c0b74376 353 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 352 1.4E-118 T 13-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 P40_15630 8f121b224663921092f61033a1e21272 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15630 8f121b224663921092f61033a1e21272 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15630 8f121b224663921092f61033a1e21272 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15630 8f121b224663921092f61033a1e21272 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15630 8f121b224663921092f61033a1e21272 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 1.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15630 8f121b224663921092f61033a1e21272 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.9E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15630 8f121b224663921092f61033a1e21272 263 Gene3D G3DSA:3.40.50.720 1 262 4.2E-72 T 13-10-2018 P40_15630 8f121b224663921092f61033a1e21272 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.8E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15630 8f121b224663921092f61033a1e21272 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.8E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15630 8f121b224663921092f61033a1e21272 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.8E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_15630 8f121b224663921092f61033a1e21272 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 260 3.5E-52 T 13-10-2018 P40_15630 8f121b224663921092f61033a1e21272 263 SUPERFAMILY SSF51735 6 261 4.96E-70 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_09915 bbdff532d48b0b5da434439e58bf4e0b 310 PIRSF PIRSF007580 5 285 1.5E-56 T 13-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 P40_09915 bbdff532d48b0b5da434439e58bf4e0b 310 Pfam PF10118 Predicted metal-dependent hydrolase 15 266 2.9E-68 T 13-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 P40_19235 02f0a1f3375d90645d87fb6facfe0e19 347 SUPERFAMILY SSF101898 10 346 2.38E-23 T 13-10-2018 P40_19235 02f0a1f3375d90645d87fb6facfe0e19 347 Gene3D G3DSA:2.120.10.30 2 217 3.5E-16 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_19235 02f0a1f3375d90645d87fb6facfe0e19 347 Pfam PF01436 NHL repeat 121 145 6.2E-5 T 13-10-2018 IPR001258 NHL repeat GO:0005515 P40_19235 02f0a1f3375d90645d87fb6facfe0e19 347 Gene3D G3DSA:2.120.10.30 226 343 3.8E-5 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_07820 5060589297d66e1b1c0e8f88c1fa0384 387 Gene3D G3DSA:3.40.50.2300 30 338 6.9E-64 T 13-10-2018 P40_07820 5060589297d66e1b1c0e8f88c1fa0384 387 Gene3D G3DSA:3.40.50.2300 149 279 6.9E-64 T 13-10-2018 P40_07820 5060589297d66e1b1c0e8f88c1fa0384 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 50 66 7.9E-5 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_07820 5060589297d66e1b1c0e8f88c1fa0384 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 28 44 7.9E-5 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_07820 5060589297d66e1b1c0e8f88c1fa0384 387 SUPERFAMILY SSF53822 27 378 1.61E-62 T 13-10-2018 IPR028082 Periplasmic binding protein-like I P40_07820 5060589297d66e1b1c0e8f88c1fa0384 387 Pfam PF13458 Periplasmic binding protein 27 375 1.2E-50 T 13-10-2018 IPR028081 Leucine-binding protein domain P40_07405 549187c4415c7be9fc9f4624da0f9da7 163 Pfam PF06496 Protein of unknown function (DUF1097) 14 148 4.6E-25 T 13-10-2018 IPR009476 Protein of unknown function DUF1097 P40_11905 c6f9f079e96f6dc17414be83e68ebbdf 253 SUPERFAMILY SSF52540 54 167 1.06E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_11905 c6f9f079e96f6dc17414be83e68ebbdf 253 Gene3D G3DSA:3.40.50.300 52 166 1.6E-21 T 13-10-2018 P40_16115 f3a241679f87349111a22b760a005894 230 PRINTS PR01008 Flagellar L-ring protein signature 170 186 8.2E-28 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 P40_16115 f3a241679f87349111a22b760a005894 230 PRINTS PR01008 Flagellar L-ring protein signature 191 205 8.2E-28 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 P40_16115 f3a241679f87349111a22b760a005894 230 PRINTS PR01008 Flagellar L-ring protein signature 144 159 8.2E-28 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 P40_16115 f3a241679f87349111a22b760a005894 230 PRINTS PR01008 Flagellar L-ring protein signature 207 221 8.2E-28 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 P40_16115 f3a241679f87349111a22b760a005894 230 PRINTS PR01008 Flagellar L-ring protein signature 74 86 8.2E-28 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 P40_16115 f3a241679f87349111a22b760a005894 230 Hamap MF_00415 Flagellar L-ring protein [flgH]. 12 228 25.011 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 P40_16115 f3a241679f87349111a22b760a005894 230 Pfam PF02107 Flagellar L-ring protein 51 229 7.7E-57 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 P40_16350 fc1798dd195400444ccb13c194e640e3 736 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 47 725 3.0E-199 T 13-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ P40_16350 fc1798dd195400444ccb13c194e640e3 736 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 144 412 1.6E-58 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_16350 fc1798dd195400444ccb13c194e640e3 736 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 454 655 1.5E-18 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_03470 74c5bfa766c5610bfa22a11be1cb5c81 432 Gene3D G3DSA:3.40.50.2300 147 388 3.1E-132 T 13-10-2018 P40_03470 74c5bfa766c5610bfa22a11be1cb5c81 432 Gene3D G3DSA:3.40.50.2300 34 368 3.1E-132 T 13-10-2018 P40_03470 74c5bfa766c5610bfa22a11be1cb5c81 432 SUPERFAMILY SSF53822 31 401 2.94E-88 T 13-10-2018 IPR028082 Periplasmic binding protein-like I P40_03470 74c5bfa766c5610bfa22a11be1cb5c81 432 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 32 397 1.2E-174 T 13-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like P40_03470 74c5bfa766c5610bfa22a11be1cb5c81 432 Pfam PF13433 Periplasmic binding protein domain 32 400 3.6E-173 T 13-10-2018 P40_14555 2e9e1480c59e06c5061472f3ecb78765 200 Pfam PF01810 LysE type translocator 20 192 1.8E-15 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 P40_07060 d3b44f00b1a4ac7c635b429bc6dc5429 370 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 356 1.8E-102 T 13-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 P40_07060 d3b44f00b1a4ac7c635b429bc6dc5429 370 Gene3D G3DSA:3.90.226.10 3 370 1.4E-114 T 13-10-2018 P40_07060 d3b44f00b1a4ac7c635b429bc6dc5429 370 SUPERFAMILY SSF52096 18 342 5.16E-58 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_10030 4eca5d600cb254241e3e691b3dad871c 168 Gene3D G3DSA:3.40.140.10 44 168 2.2E-40 T 13-10-2018 P40_10030 4eca5d600cb254241e3e691b3dad871c 168 SUPERFAMILY SSF102712 60 140 8.24E-7 T 13-10-2018 P40_10030 4eca5d600cb254241e3e691b3dad871c 168 Pfam PF04002 RadC-like JAB domain 48 166 1.2E-40 T 13-10-2018 IPR025657 RadC-like JAB domain P40_10030 4eca5d600cb254241e3e691b3dad871c 168 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 117 122 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site P40_12725 b7c9ded6a870da809de49d2872f61b59 256 Pfam PF14518 Iron-containing redox enzyme 54 231 2.5E-23 T 13-10-2018 P40_12725 b7c9ded6a870da809de49d2872f61b59 256 SUPERFAMILY SSF48613 18 240 5.99E-42 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 P40_12725 b7c9ded6a870da809de49d2872f61b59 256 Gene3D G3DSA:1.20.910.10 2 251 2.2E-70 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 P40_20335 092d87c1ea94b4025779fffc4f2d0879 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.3E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20335 092d87c1ea94b4025779fffc4f2d0879 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.3E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20335 092d87c1ea94b4025779fffc4f2d0879 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.3E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20335 092d87c1ea94b4025779fffc4f2d0879 250 SUPERFAMILY SSF51735 4 247 2.29E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_20335 092d87c1ea94b4025779fffc4f2d0879 250 Pfam PF00106 short chain dehydrogenase 5 198 6.7E-43 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20335 092d87c1ea94b4025779fffc4f2d0879 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.5E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20335 092d87c1ea94b4025779fffc4f2d0879 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.5E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20335 092d87c1ea94b4025779fffc4f2d0879 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.5E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20335 092d87c1ea94b4025779fffc4f2d0879 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.5E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20335 092d87c1ea94b4025779fffc4f2d0879 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.5E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20335 092d87c1ea94b4025779fffc4f2d0879 250 Gene3D G3DSA:3.40.50.720 2 248 7.5E-51 T 13-10-2018 P40_20020 640bc093815631ffde3c5a5b1b6bf590 374 SUPERFAMILY SSF46894 301 366 9.86E-12 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_20020 640bc093815631ffde3c5a5b1b6bf590 374 SUPERFAMILY SSF55781 22 172 3.92E-7 T 13-10-2018 P40_20020 640bc093815631ffde3c5a5b1b6bf590 374 Pfam PF00196 Bacterial regulatory proteins, luxR family 312 364 1.4E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20020 640bc093815631ffde3c5a5b1b6bf590 374 SMART SM00421 309 366 6.7E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_20020 640bc093815631ffde3c5a5b1b6bf590 374 Gene3D G3DSA:1.10.10.10 263 372 8.3E-10 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_15310 e5b379b1274192684b08148091fd9740 351 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P40_15310 e5b379b1274192684b08148091fd9740 351 Pfam PF08402 TOBE domain 276 345 1.9E-6 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 P40_15310 e5b379b1274192684b08148091fd9740 351 Gene3D G3DSA:3.40.50.300 3 242 4.3E-68 T 13-10-2018 P40_15310 e5b379b1274192684b08148091fd9740 351 Pfam PF00005 ABC transporter 22 166 1.9E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_15310 e5b379b1274192684b08148091fd9740 351 SUPERFAMILY SSF52540 5 244 4.13E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_15310 e5b379b1274192684b08148091fd9740 351 SUPERFAMILY SSF50331 244 349 2.18E-8 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal P40_15310 e5b379b1274192684b08148091fd9740 351 SMART SM00382 30 215 6.1E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_01245 d62ac2e6e085d81f64e7e02d72da0290 155 Gene3D G3DSA:3.90.960.10 1 150 1.2E-48 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 P40_01245 d62ac2e6e085d81f64e7e02d72da0290 155 Pfam PF04073 Aminoacyl-tRNA editing domain 22 142 4.2E-25 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 P40_01245 d62ac2e6e085d81f64e7e02d72da0290 155 SUPERFAMILY SSF55826 6 148 3.4E-33 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 P40_16405 d021ff5f6525cdf9cc509b04cea1aab9 308 Gene3D G3DSA:2.70.70.10 145 307 2.5E-46 T 13-10-2018 IPR011055 Duplicated hybrid motif P40_16405 d021ff5f6525cdf9cc509b04cea1aab9 308 Pfam PF01551 Peptidase family M23 206 299 3.8E-32 T 13-10-2018 IPR016047 Peptidase M23 P40_16405 d021ff5f6525cdf9cc509b04cea1aab9 308 SUPERFAMILY SSF51261 170 303 2.25E-53 T 13-10-2018 IPR011055 Duplicated hybrid motif P40_13025 d44989be370cd24577a5115dc2d5465d 135 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 19 115 4.0E-24 T 13-10-2018 IPR020358 Uncharacterised protein family Y4oB P40_13025 d44989be370cd24577a5115dc2d5465d 135 Pfam PF09722 Protein of unknown function (DUF2384) 79 133 2.2E-7 T 13-10-2018 IPR024467 Domain of unknown function DUF2384 P40_08985 793a97fdc1eb359fe5735e679612dae9 252 Gene3D G3DSA:3.90.226.10 2 252 5.8E-61 T 13-10-2018 P40_08985 793a97fdc1eb359fe5735e679612dae9 252 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 250 1.2E-38 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_08985 793a97fdc1eb359fe5735e679612dae9 252 SUPERFAMILY SSF52096 1 251 4.64E-60 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_02405 43f90276e7cbfd48e3947ad8bf41cfa7 111 Pfam PF11804 Protein of unknown function (DUF3325) 4 102 5.4E-26 T 13-10-2018 IPR021762 Protein of unknown function DUF3325 P40_18420 1e06748ca642c0f95562bf026902b4e8 113 Gene3D G3DSA:2.60.300.12 7 113 9.9E-36 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 P40_18420 1e06748ca642c0f95562bf026902b4e8 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 2 113 34.999 T 13-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 P40_18420 1e06748ca642c0f95562bf026902b4e8 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 1.9E-20 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 P40_18420 1e06748ca642c0f95562bf026902b4e8 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 8 113 3.1E-38 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 P40_18420 1e06748ca642c0f95562bf026902b4e8 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 P40_18420 1e06748ca642c0f95562bf026902b4e8 113 SUPERFAMILY SSF89360 6 99 2.22E-31 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 P40_11725 eaf622855d8a46d04f4e3dff11a73460 411 Gene3D G3DSA:3.30.450.40 231 407 1.1E-11 T 13-10-2018 IPR029016 GAF-like domain superfamily P40_11725 eaf622855d8a46d04f4e3dff11a73460 411 SUPERFAMILY SSF55781 225 386 1.5E-10 T 13-10-2018 P40_05995 0e4eb540bde0151b7ee460e9f034760b 325 SMART SM00342 238 321 2.0E-16 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_05995 0e4eb540bde0151b7ee460e9f034760b 325 Pfam PF12833 Helix-turn-helix domain 245 323 3.1E-16 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 P40_05995 0e4eb540bde0151b7ee460e9f034760b 325 Gene3D G3DSA:1.10.10.60 222 325 5.2E-22 T 13-10-2018 P40_05995 0e4eb540bde0151b7ee460e9f034760b 325 SUPERFAMILY SSF46689 276 324 6.27E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_05995 0e4eb540bde0151b7ee460e9f034760b 325 SUPERFAMILY SSF52317 14 202 5.0E-25 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_05995 0e4eb540bde0151b7ee460e9f034760b 325 Gene3D G3DSA:3.40.50.880 11 209 3.2E-34 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_15035 c78510e70d060b131e4c28d507322a51 361 Pfam PF01594 AI-2E family transporter 21 346 3.9E-70 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like P40_03385 1d08ecd351d393fb2e4908c029e5e08d 205 SUPERFAMILY SSF50475 2 193 2.65E-51 T 13-10-2018 P40_03385 1d08ecd351d393fb2e4908c029e5e08d 205 Pfam PF01613 Flavin reductase like domain 26 166 3.9E-16 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 P40_03385 1d08ecd351d393fb2e4908c029e5e08d 205 SMART SM00903 22 175 8.4E-15 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 P40_03385 1d08ecd351d393fb2e4908c029e5e08d 205 Gene3D G3DSA:2.30.110.10 16 205 3.0E-56 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 P40_06735 3fa8014d8a7cdabc414eced2e08b3297 135 PIRSF PIRSF029543 9 135 8.3E-26 T 13-10-2018 IPR016924 Uncharacterised conserved protein UCP029543 P40_04650 2255ddb6f09ebf9cc8821cc22c64968b 640 SMART SM00763 19 376 6.8E-213 T 13-10-2018 IPR013153 PrkA AAA domain P40_04650 2255ddb6f09ebf9cc8821cc22c64968b 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 7.8E-70 T 13-10-2018 IPR010650 PrkA C-terminal domain P40_04650 2255ddb6f09ebf9cc8821cc22c64968b 640 Pfam PF08298 PrkA AAA domain 20 376 8.8E-174 T 13-10-2018 IPR013153 PrkA AAA domain P40_04650 2255ddb6f09ebf9cc8821cc22c64968b 640 SUPERFAMILY SSF52540 75 363 1.43E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_04650 2255ddb6f09ebf9cc8821cc22c64968b 640 PIRSF PIRSF000549 1 640 3.1E-284 T 13-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 P40_06080 3e8c7a79c2898cbeb742a71ed9c5a394 412 Gene3D G3DSA:3.40.50.300 191 398 2.5E-69 T 13-10-2018 P40_06080 3e8c7a79c2898cbeb742a71ed9c5a394 412 SUPERFAMILY SSF52540 55 398 6.49E-102 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_06080 3e8c7a79c2898cbeb742a71ed9c5a394 412 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 91 188 1.1E-22 T 13-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain P40_06080 3e8c7a79c2898cbeb742a71ed9c5a394 412 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 196 391 1.1E-64 T 13-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop P40_06080 3e8c7a79c2898cbeb742a71ed9c5a394 412 Gene3D G3DSA:3.40.50.720 38 190 1.8E-46 T 13-10-2018 P40_13010 43f396ca4e5e458b9f69b04329a78068 357 SUPERFAMILY SSF63829 17 351 2.32E-52 T 13-10-2018 P40_13010 43f396ca4e5e458b9f69b04329a78068 357 Pfam PF03088 Strictosidine synthase 147 235 1.3E-25 T 13-10-2018 IPR018119 Strictosidine synthase, conserved region GO:0009058|GO:0016844 P40_13010 43f396ca4e5e458b9f69b04329a78068 357 Gene3D G3DSA:2.120.10.30 49 357 2.8E-81 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_14400 fbb6045d4feb3991a73ecc8c79940085 465 SUPERFAMILY SSF51556 61 389 5.96E-95 T 13-10-2018 IPR032466 Metal-dependent hydrolase P40_14400 fbb6045d4feb3991a73ecc8c79940085 465 Pfam PF01979 Amidohydrolase family 58 436 2.4E-53 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P40_14400 fbb6045d4feb3991a73ecc8c79940085 465 Gene3D G3DSA:2.30.40.10 13 444 6.0E-135 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_14400 fbb6045d4feb3991a73ecc8c79940085 465 SUPERFAMILY SSF51338 14 463 2.06E-18 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P40_14400 fbb6045d4feb3991a73ecc8c79940085 465 Gene3D G3DSA:3.20.20.140 63 446 6.0E-135 T 13-10-2018 P40_18175 ee3625c300d4c751bb65aba1f341c186 116 SUPERFAMILY SSF53137 4 114 3.18E-52 T 13-10-2018 P40_18175 ee3625c300d4c751bb65aba1f341c186 116 Gene3D G3DSA:3.30.420.100 2 116 1.0E-42 T 13-10-2018 P40_18175 ee3625c300d4c751bb65aba1f341c186 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 116 27.124 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_18175 ee3625c300d4c751bb65aba1f341c186 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 2 116 2.0E-42 T 13-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_18175 ee3625c300d4c751bb65aba1f341c186 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 116 5.6E-43 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_01470 63022d1d185adfec7f6ac0e935ff0562 120 SUPERFAMILY SSF55166 15 78 1.26E-7 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 P40_07050 3dafa265f68c1138a6b170eb7b32841f 222 Gene3D G3DSA:1.10.357.10 19 221 1.3E-54 T 13-10-2018 P40_07050 3dafa265f68c1138a6b170eb7b32841f 222 SUPERFAMILY SSF46689 16 83 9.75E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_07050 3dafa265f68c1138a6b170eb7b32841f 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 68 5.1E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_20330 c3eb6b183db039e1ad8f202cb3487e19 225 SUPERFAMILY SSF53254 1 219 1.83E-33 T 13-10-2018 IPR029033 Histidine phosphatase superfamily P40_20330 c3eb6b183db039e1ad8f202cb3487e19 225 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 109 2.8E-10 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_20330 c3eb6b183db039e1ad8f202cb3487e19 225 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 112 213 1.9E-10 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_20330 c3eb6b183db039e1ad8f202cb3487e19 225 SMART SM00855 3 172 3.9E-11 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_20330 c3eb6b183db039e1ad8f202cb3487e19 225 Gene3D G3DSA:3.40.50.1240 1 221 1.7E-31 T 13-10-2018 IPR029033 Histidine phosphatase superfamily P40_20270 1b557bdb14274bd574f81b0c2b76e317 214 Pfam PF04463 Protein of unknown function (DUF523) 24 157 5.1E-27 T 13-10-2018 IPR007553 Domain of unknown function DUF523 P40_06955 29959cd2434033d9d516455c219de937 450 Pfam PF03929 PepSY-associated TM region 10 394 1.3E-72 T 13-10-2018 IPR005625 PepSY-associated TM protein P40_17815 18febbfd8f1b425df9ea1e7783d30cbc 373 Pfam PF04116 Fatty acid hydroxylase superfamily 207 338 3.7E-31 T 13-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 P40_16430 926112955da2e91a3bb8a07ccd098ed8 250 Pfam PF03799 Cell division protein FtsQ 111 224 2.7E-17 T 13-10-2018 IPR005548 Cell division protein FtsQ/DivIB P40_16430 926112955da2e91a3bb8a07ccd098ed8 250 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 7 232 22.1 T 13-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 P40_16430 926112955da2e91a3bb8a07ccd098ed8 250 Gene3D G3DSA:3.40.50.11690 109 237 7.2E-34 T 13-10-2018 P40_16430 926112955da2e91a3bb8a07ccd098ed8 250 Gene3D G3DSA:3.10.20.310 36 106 3.7E-15 T 13-10-2018 P40_16430 926112955da2e91a3bb8a07ccd098ed8 250 Pfam PF08478 POTRA domain, FtsQ-type 38 107 6.0E-13 T 13-10-2018 IPR013685 POTRA domain, FtsQ-type P40_10940 66dc55daf1cdfd81d0c349531785c8d2 257 Gene3D G3DSA:3.40.50.1820 2 252 4.4E-27 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_10940 66dc55daf1cdfd81d0c349531785c8d2 257 SUPERFAMILY SSF53474 5 251 1.33E-28 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_10940 66dc55daf1cdfd81d0c349531785c8d2 257 Pfam PF12697 Alpha/beta hydrolase family 12 246 4.1E-12 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_10570 e6268791321388cf4c16b74a49ef1b67 611 PIRSF PIRSF028304 1 610 6.0E-181 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like P40_10570 e6268791321388cf4c16b74a49ef1b67 611 Pfam PF05947 Type VI secretion system, TssF 5 609 1.1E-209 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like P40_10570 e6268791321388cf4c16b74a49ef1b67 611 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 610 1.1E-213 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like P40_15390 4166151cc47a1c648eee49fb21711893 444 PIRSF PIRSF006066 6 443 1.6E-82 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_15390 4166151cc47a1c648eee49fb21711893 444 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 24 437 1.2E-89 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_15390 4166151cc47a1c648eee49fb21711893 444 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 432 1.5E-82 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_19430 1174026f6cbc1e188d70b80e2c1e61d9 546 Pfam PF02470 MlaD protein 42 133 6.4E-11 T 13-10-2018 IPR003399 Mce/MlaD P40_19430 1174026f6cbc1e188d70b80e2c1e61d9 546 Pfam PF02470 MlaD protein 288 390 7.4E-12 T 13-10-2018 IPR003399 Mce/MlaD P40_04950 2a8d1325746c2f34e879fd144a766f3a 232 Pfam PF13280 WYL domain 139 224 1.3E-15 T 13-10-2018 IPR026881 WYL domain P40_04950 2a8d1325746c2f34e879fd144a766f3a 232 Pfam PF08279 HTH domain 7 59 8.6E-16 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 P40_04950 2a8d1325746c2f34e879fd144a766f3a 232 Gene3D G3DSA:1.10.10.10 1 64 2.6E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_04950 2a8d1325746c2f34e879fd144a766f3a 232 SUPERFAMILY SSF46785 1 62 2.72E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_17540 31396973d4186bd808f626eddbc9e261 498 Pfam PF07916 TraG-like protein, N-terminal region 16 478 8.8E-61 T 13-10-2018 IPR012931 TraG-like, N-terminal P40_14895 2b3f1883feac9a7fc1fa9a60141890ac 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 51 2.2E-22 T 13-10-2018 IPR010260 DNA-binding transcriptional activator AlpA P40_14895 2b3f1883feac9a7fc1fa9a60141890ac 68 Gene3D G3DSA:1.10.238.160 3 60 3.6E-6 T 13-10-2018 P40_20785 e18ab3de5c1deebf3bf9d7c17bdb355a 480 Pfam PF06628 Catalase-related immune-responsive 416 476 1.5E-24 T 13-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 P40_20785 e18ab3de5c1deebf3bf9d7c17bdb355a 480 PRINTS PR00067 Catalase signature 124 142 2.1E-72 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 P40_20785 e18ab3de5c1deebf3bf9d7c17bdb355a 480 PRINTS PR00067 Catalase signature 289 316 2.1E-72 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 P40_20785 e18ab3de5c1deebf3bf9d7c17bdb355a 480 PRINTS PR00067 Catalase signature 22 45 2.1E-72 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 P40_20785 e18ab3de5c1deebf3bf9d7c17bdb355a 480 PRINTS PR00067 Catalase signature 321 347 2.1E-72 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 P40_20785 e18ab3de5c1deebf3bf9d7c17bdb355a 480 PRINTS PR00067 Catalase signature 84 102 2.1E-72 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 P40_20785 e18ab3de5c1deebf3bf9d7c17bdb355a 480 PRINTS PR00067 Catalase signature 105 122 2.1E-72 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 P40_20785 e18ab3de5c1deebf3bf9d7c17bdb355a 480 SUPERFAMILY SSF56634 2 478 4.45E-218 T 13-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 P40_20785 e18ab3de5c1deebf3bf9d7c17bdb355a 480 ProSitePatterns PS00438 Catalase proximal active site signature. 45 61 - T 13-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 P40_20785 e18ab3de5c1deebf3bf9d7c17bdb355a 480 Pfam PF00199 Catalase 9 389 3.4E-192 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 P40_20785 e18ab3de5c1deebf3bf9d7c17bdb355a 480 SMART SM01060 9 392 6.5E-289 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 P40_20785 e18ab3de5c1deebf3bf9d7c17bdb355a 480 PIRSF PIRSF038928 1 480 3.4E-230 T 13-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 P40_20785 e18ab3de5c1deebf3bf9d7c17bdb355a 480 Gene3D G3DSA:2.40.180.10 4 480 3.7E-231 T 13-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 P40_20785 e18ab3de5c1deebf3bf9d7c17bdb355a 480 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 13-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 P40_21180 e469d247926b854e5858b9ecb392c4cc 54 PRINTS PR00163 Rubredoxin signature 33 49 1.4E-10 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 P40_21180 e469d247926b854e5858b9ecb392c4cc 54 PRINTS PR00163 Rubredoxin signature 3 19 1.4E-10 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 P40_21180 e469d247926b854e5858b9ecb392c4cc 54 Pfam PF00301 Rubredoxin 3 49 1.4E-24 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 P40_21180 e469d247926b854e5858b9ecb392c4cc 54 Gene3D G3DSA:2.20.28.10 1 54 2.9E-30 T 13-10-2018 P40_21180 e469d247926b854e5858b9ecb392c4cc 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 13-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 P40_21180 e469d247926b854e5858b9ecb392c4cc 54 PIRSF PIRSF000071 1 54 1.2E-28 T 13-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 P40_21180 e469d247926b854e5858b9ecb392c4cc 54 SUPERFAMILY SSF57802 1 53 1.35E-24 T 13-10-2018 P40_00940 d1411e93c59eb75f74397fe6920b2012 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.002 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_00940 d1411e93c59eb75f74397fe6920b2012 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 13-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P40_00940 d1411e93c59eb75f74397fe6920b2012 55 Gene3D G3DSA:2.20.28.120 1 55 8.7E-28 T 13-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_00940 d1411e93c59eb75f74397fe6920b2012 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 6 55 6.8E-24 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_00940 d1411e93c59eb75f74397fe6920b2012 55 Pfam PF00471 Ribosomal protein L33 7 53 2.9E-18 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_00940 d1411e93c59eb75f74397fe6920b2012 55 SUPERFAMILY SSF57829 3 53 5.92E-19 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 P40_01055 500e7f98755a88bef21f6417c0f9a10e 669 Pfam PF01968 Hydantoinase/oxoprolinase 198 474 1.8E-90 T 13-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 P40_01055 500e7f98755a88bef21f6417c0f9a10e 669 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 5 179 4.7E-42 T 13-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 P40_18855 be937f86f2d9dddbfc2306562ec4b0ce 292 SUPERFAMILY SSF161098 51 277 1.57E-50 T 13-10-2018 IPR035906 MetI-like superfamily P40_18855 be937f86f2d9dddbfc2306562ec4b0ce 292 Gene3D G3DSA:1.10.3720.10 47 291 2.3E-57 T 13-10-2018 IPR035906 MetI-like superfamily P40_18855 be937f86f2d9dddbfc2306562ec4b0ce 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 287 5.4E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_13725 62701c85af6b6b1d5e6458e38002d0e6 152 Gene3D G3DSA:1.20.120.1490 23 132 6.5E-9 T 13-10-2018 P40_13725 62701c85af6b6b1d5e6458e38002d0e6 152 Pfam PF07813 LTXXQ motif family protein 32 128 2.8E-7 T 13-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 P40_14490 ca6ae835f7b230750c433a7b3a1c3742 592 Gene3D G3DSA:3.30.300.30 436 542 1.3E-24 T 13-10-2018 P40_14490 ca6ae835f7b230750c433a7b3a1c3742 592 Pfam PF00501 AMP-binding enzyme 27 441 2.5E-70 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_14490 ca6ae835f7b230750c433a7b3a1c3742 592 SUPERFAMILY SSF56801 22 539 2.35E-116 T 13-10-2018 P40_14490 ca6ae835f7b230750c433a7b3a1c3742 592 ProSitePatterns PS00455 Putative AMP-binding domain signature. 193 204 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_14490 ca6ae835f7b230750c433a7b3a1c3742 592 Gene3D G3DSA:3.40.50.12780 9 434 2.3E-81 T 13-10-2018 P40_14490 ca6ae835f7b230750c433a7b3a1c3742 592 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 526 2.7E-16 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_10300 b43790683b6e98a5027d385c309e9b84 88 SUPERFAMILY SSF89447 1 38 1.92E-5 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily P40_10300 b43790683b6e98a5027d385c309e9b84 88 SMART SM00966 4 50 4.7E-6 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 P40_10300 b43790683b6e98a5027d385c309e9b84 88 Gene3D G3DSA:2.10.260.10 2 40 4.4E-6 T 13-10-2018 P40_14710 7a6b6e34281f7227c1785697f05eae3d 165 Pfam PF04002 RadC-like JAB domain 45 159 3.9E-39 T 13-10-2018 IPR025657 RadC-like JAB domain P40_14710 7a6b6e34281f7227c1785697f05eae3d 165 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 114 119 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site P40_14710 7a6b6e34281f7227c1785697f05eae3d 165 Gene3D G3DSA:3.40.140.10 41 165 4.4E-40 T 13-10-2018 P40_14710 7a6b6e34281f7227c1785697f05eae3d 165 SUPERFAMILY SSF102712 52 134 4.84E-7 T 13-10-2018 P40_02200 a6e2f37fc85d6625872b5b650acdddcd 60 Pfam PF10636 Hemin uptake protein hemP 25 60 8.8E-16 T 13-10-2018 IPR019600 Hemin uptake protein HemP P40_02200 a6e2f37fc85d6625872b5b650acdddcd 60 Gene3D G3DSA:2.10.70.10 22 60 2.2E-14 T 13-10-2018 P40_19305 c2fe63bd225d8ba7c23692832ef82e8c 450 Pfam PF05036 Sporulation related domain 368 437 2.3E-9 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 P40_19305 c2fe63bd225d8ba7c23692832ef82e8c 450 Gene3D G3DSA:3.30.70.1070 351 450 4.0E-18 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 P40_19305 c2fe63bd225d8ba7c23692832ef82e8c 450 SMART SM00382 27 178 0.0011 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_19305 c2fe63bd225d8ba7c23692832ef82e8c 450 SUPERFAMILY SSF110997 367 428 1.44E-6 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 P40_19305 c2fe63bd225d8ba7c23692832ef82e8c 450 SUPERFAMILY SSF52540 14 202 1.74E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_08030 4d9d0ce87734cfc172145f2f9bf8bfed 135 Pfam PF07045 Domain of unknown function (DUF1330) 45 130 1.1E-7 T 13-10-2018 IPR010753 Domain of unknown function DUF1330 P40_08030 4d9d0ce87734cfc172145f2f9bf8bfed 135 SUPERFAMILY SSF54909 44 126 9.65E-16 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_08030 4d9d0ce87734cfc172145f2f9bf8bfed 135 Gene3D G3DSA:3.30.70.100 1 135 1.4E-43 T 13-10-2018 P40_11620 0749ff045ec3e3ef1a5c9df2ef6d6bc1 461 SUPERFAMILY SSF103378 15 451 1.24E-108 T 13-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 P40_11620 0749ff045ec3e3ef1a5c9df2ef6d6bc1 461 Pfam PF03972 MmgE/PrpD family 17 447 1.4E-109 T 13-10-2018 IPR005656 MmgE/PrpD GO:0016829 P40_11620 0749ff045ec3e3ef1a5c9df2ef6d6bc1 461 Gene3D G3DSA:1.10.4100.10 40 423 9.0E-107 T 13-10-2018 P40_11620 0749ff045ec3e3ef1a5c9df2ef6d6bc1 461 Gene3D G3DSA:3.30.1330.120 277 406 9.0E-107 T 13-10-2018 P40_00560 7f198cf89193b098b9e519a1adf4305b 186 SUPERFAMILY SSF54427 67 173 6.87E-13 T 13-10-2018 IPR032710 NTF2-like domain superfamily P40_00560 7f198cf89193b098b9e519a1adf4305b 186 Pfam PF10184 Uncharacterized conserved protein (DUF2358) 64 158 3.9E-9 T 13-10-2018 IPR018790 Protein of unknown function DUF2358 P40_00560 7f198cf89193b098b9e519a1adf4305b 186 Gene3D G3DSA:3.10.450.50 48 174 2.4E-11 T 13-10-2018 P40_04205 334b48e783a2d9507e9d21decde60244 318 Pfam PF02649 Type I GTP cyclohydrolase folE2 13 304 6.7E-73 T 13-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 P40_04205 334b48e783a2d9507e9d21decde60244 318 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 13 309 33.684 T 13-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 P40_21020 49fbf124eb00cf3f30dacc1bbabea83e 253 PIRSF PIRSF006648 8 250 1.2E-28 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 P40_21020 49fbf124eb00cf3f30dacc1bbabea83e 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 21 42 9.1E-11 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 P40_21020 49fbf124eb00cf3f30dacc1bbabea83e 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 9.1E-11 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 P40_21020 49fbf124eb00cf3f30dacc1bbabea83e 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 99 124 9.1E-11 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 P40_21020 49fbf124eb00cf3f30dacc1bbabea83e 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 136 160 9.1E-11 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 P40_21020 49fbf124eb00cf3f30dacc1bbabea83e 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 9.1E-11 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 P40_21020 49fbf124eb00cf3f30dacc1bbabea83e 253 Pfam PF01061 ABC-2 type transporter 6 216 2.6E-33 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 P40_07575 5de612690ac46699a5ab223eb1f57f6a 248 SMART SM00382 28 230 4.8E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_07575 5de612690ac46699a5ab223eb1f57f6a 248 Pfam PF00005 ABC transporter 22 175 1.3E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_07575 5de612690ac46699a5ab223eb1f57f6a 248 SUPERFAMILY SSF52540 4 245 9.1E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_07575 5de612690ac46699a5ab223eb1f57f6a 248 Gene3D G3DSA:3.40.50.300 1 245 3.1E-54 T 13-10-2018 P40_07575 5de612690ac46699a5ab223eb1f57f6a 248 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 222 244 8.6E-12 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal P40_11775 c5feb5a8eaf8be81ba3dd007d0abda8f 74 Gene3D G3DSA:1.10.1220.10 30 74 8.0E-8 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 P40_11775 c5feb5a8eaf8be81ba3dd007d0abda8f 74 SUPERFAMILY SSF47598 26 73 8.34E-10 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 P40_05290 5422a31667515958c98e74e0cb1d035d 105 Gene3D G3DSA:3.40.250.10 1 105 1.5E-24 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_05290 5422a31667515958c98e74e0cb1d035d 105 Pfam PF00581 Rhodanese-like domain 7 96 2.3E-12 T 13-10-2018 IPR001763 Rhodanese-like domain P40_05290 5422a31667515958c98e74e0cb1d035d 105 SUPERFAMILY SSF52821 3 103 1.83E-25 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily P40_05290 5422a31667515958c98e74e0cb1d035d 105 SMART SM00450 5 100 1.2E-16 T 13-10-2018 IPR001763 Rhodanese-like domain P40_15560 f387f7ace107f347d3a0152983ef519a 164 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 149 1.1E-24 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_15890 f51afb19f332e8424af85514b2c30868 130 Pfam PF06366 Flagellar protein FlhE 34 130 1.5E-26 T 13-10-2018 IPR009420 Flagellar protein FlhE P40_08825 a12ab4a8a97cf7a15aceed8447a3ef6c 388 Gene3D G3DSA:3.40.50.300 41 383 7.4E-57 T 13-10-2018 P40_08825 a12ab4a8a97cf7a15aceed8447a3ef6c 388 Pfam PF13469 Sulfotransferase family 71 329 1.1E-23 T 13-10-2018 P40_08825 a12ab4a8a97cf7a15aceed8447a3ef6c 388 SUPERFAMILY SSF52540 69 356 2.82E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_05625 11358b8b2103c865f293337b72083e65 87 Pfam PF01527 Transposase 2 70 6.3E-23 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 P40_05625 11358b8b2103c865f293337b72083e65 87 SUPERFAMILY SSF46689 1 68 2.33E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_04625 06eae723b2ed83086741fe00a6893e9e 245 SUPERFAMILY SSF51735 5 239 4.1E-67 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_04625 06eae723b2ed83086741fe00a6893e9e 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_04625 06eae723b2ed83086741fe00a6893e9e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.1E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04625 06eae723b2ed83086741fe00a6893e9e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 7.1E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04625 06eae723b2ed83086741fe00a6893e9e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 7.1E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04625 06eae723b2ed83086741fe00a6893e9e 245 Gene3D G3DSA:3.40.50.720 2 240 2.3E-63 T 13-10-2018 P40_04625 06eae723b2ed83086741fe00a6893e9e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.4E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04625 06eae723b2ed83086741fe00a6893e9e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 6.4E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04625 06eae723b2ed83086741fe00a6893e9e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.4E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04625 06eae723b2ed83086741fe00a6893e9e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.4E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04625 06eae723b2ed83086741fe00a6893e9e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 6.4E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04625 06eae723b2ed83086741fe00a6893e9e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 6.4E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_04625 06eae723b2ed83086741fe00a6893e9e 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 237 1.9E-48 T 13-10-2018 P40_03730 ec96fb9094b1cc65b65ab6d17f92f7b4 76 Gene3D G3DSA:4.10.640.10 1 74 3.6E-25 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03730 ec96fb9094b1cc65b65ab6d17f92f7b4 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.312 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03730 ec96fb9094b1cc65b65ab6d17f92f7b4 76 SUPERFAMILY SSF46911 3 74 7.85E-27 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03730 ec96fb9094b1cc65b65ab6d17f92f7b4 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-20 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03730 ec96fb9094b1cc65b65ab6d17f92f7b4 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 13-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03730 ec96fb9094b1cc65b65ab6d17f92f7b4 76 Pfam PF01084 Ribosomal protein S18 18 68 6.9E-23 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03730 ec96fb9094b1cc65b65ab6d17f92f7b4 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 4.3E-17 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03730 ec96fb9094b1cc65b65ab6d17f92f7b4 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 4.3E-17 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03730 ec96fb9094b1cc65b65ab6d17f92f7b4 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 4.3E-17 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03730 ec96fb9094b1cc65b65ab6d17f92f7b4 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 4.3E-17 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_03730 ec96fb9094b1cc65b65ab6d17f92f7b4 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 71 2.5E-33 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P40_13275 1af7798adf01855cc4b4e79df7709975 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 134 8.5E-29 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 P40_13275 1af7798adf01855cc4b4e79df7709975 141 Gene3D G3DSA:3.30.420.270 60 131 9.8E-6 T 13-10-2018 P40_05530 26427d3570a8ba9976797b8637daef7c 212 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 14 211 3.6E-100 T 13-10-2018 IPR017791 Urea carboxylase-associated protein 1 P40_05530 26427d3570a8ba9976797b8637daef7c 212 Pfam PF09347 Domain of unknown function (DUF1989) 17 184 3.1E-62 T 13-10-2018 IPR018959 Protein of unknown function DUF1989 P40_06405 c682b82d134b6c690b8ec2c023fc58f4 286 Gene3D G3DSA:1.10.3470.10 41 270 4.5E-9 T 13-10-2018 IPR037294 ABC transporter, BtuC-like P40_06405 c682b82d134b6c690b8ec2c023fc58f4 286 SUPERFAMILY SSF81345 7 262 5.89E-38 T 13-10-2018 IPR037294 ABC transporter, BtuC-like P40_06405 c682b82d134b6c690b8ec2c023fc58f4 286 Pfam PF00950 ABC 3 transport family 11 265 1.7E-80 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 P40_08940 5d7bfd51aa9f0535e60349b2c577f199 422 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 6 262 3.1E-69 T 13-10-2018 IPR017039 Virulence factor BrkB P40_08940 5d7bfd51aa9f0535e60349b2c577f199 422 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 1 289 22.297 T 13-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial P40_08940 5d7bfd51aa9f0535e60349b2c577f199 422 Pfam PF03631 Virulence factor BrkB 17 260 3.8E-51 T 13-10-2018 IPR017039 Virulence factor BrkB P40_13255 a18b8a2aaa4b29813775550549d5f809 161 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 9 154 4.4E-43 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I P40_13255 a18b8a2aaa4b29813775550549d5f809 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 128 143 2.4E-25 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 P40_13255 a18b8a2aaa4b29813775550549d5f809 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 52 68 2.4E-25 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 P40_13255 a18b8a2aaa4b29813775550549d5f809 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 86 101 2.4E-25 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 P40_13255 a18b8a2aaa4b29813775550549d5f809 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 9 26 2.4E-25 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 P40_13255 a18b8a2aaa4b29813775550549d5f809 161 SUPERFAMILY SSF52788 6 157 2.09E-51 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily P40_13255 a18b8a2aaa4b29813775550549d5f809 161 Gene3D G3DSA:3.40.50.2300 1 160 4.4E-59 T 13-10-2018 P40_13255 a18b8a2aaa4b29813775550549d5f809 161 SMART SM00226 7 156 7.7E-59 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I P40_18030 5f4486f1cb012afa3f979df90ebf8e84 119 Gene3D G3DSA:3.30.70.100 2 97 1.3E-18 T 13-10-2018 P40_18030 5f4486f1cb012afa3f979df90ebf8e84 119 SUPERFAMILY SSF54909 1 86 5.37E-21 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_18030 5f4486f1cb012afa3f979df90ebf8e84 119 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 3.5E-12 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain P40_15795 c3d4310605b5b2693fdced50d6f9bf96 256 Pfam PF06629 MltA-interacting protein MipA 38 256 4.1E-49 T 13-10-2018 IPR010583 MltA-interacting MipA P40_13590 cfa1538e695827a5e83d7b8def70f3c1 189 Pfam PF00692 dUTPase 74 184 8.7E-8 T 13-10-2018 IPR029054 dUTPase-like P40_13590 cfa1538e695827a5e83d7b8def70f3c1 189 Hamap MF_00146 dCTP deaminase [dcd]. 1 189 28.166 T 13-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 P40_13590 cfa1538e695827a5e83d7b8def70f3c1 189 Gene3D G3DSA:2.70.40.10 1 160 2.1E-53 T 13-10-2018 IPR036157 dUTPase-like superfamily P40_13590 cfa1538e695827a5e83d7b8def70f3c1 189 SUPERFAMILY SSF51283 3 188 1.44E-51 T 13-10-2018 IPR036157 dUTPase-like superfamily P40_13590 cfa1538e695827a5e83d7b8def70f3c1 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 188 2.3E-48 T 13-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 P40_09380 e4d59dc4f450019539bc3867b55f69f3 464 SUPERFAMILY SSF103473 22 461 3.92E-36 T 13-10-2018 IPR036259 MFS transporter superfamily P40_09380 e4d59dc4f450019539bc3867b55f69f3 464 Pfam PF07690 Major Facilitator Superfamily 279 459 3.3E-8 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_09380 e4d59dc4f450019539bc3867b55f69f3 464 Pfam PF07690 Major Facilitator Superfamily 27 244 4.6E-20 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_09380 e4d59dc4f450019539bc3867b55f69f3 464 Gene3D G3DSA:1.20.1250.20 271 463 2.0E-12 T 13-10-2018 P40_09380 e4d59dc4f450019539bc3867b55f69f3 464 Gene3D G3DSA:1.20.1720.10 24 229 2.8E-22 T 13-10-2018 P40_21425 60006240f7696ed5443da10907d1035d 145 SUPERFAMILY SSF54637 2 134 5.6E-36 T 13-10-2018 IPR029069 HotDog domain superfamily P40_21425 60006240f7696ed5443da10907d1035d 145 Gene3D G3DSA:3.10.129.10 2 142 1.3E-35 T 13-10-2018 P40_21425 60006240f7696ed5443da10907d1035d 145 Pfam PF03061 Thioesterase superfamily 20 101 1.5E-10 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_21425 60006240f7696ed5443da10907d1035d 145 PIRSF PIRSF003230 1 140 5.9E-26 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 P40_21425 60006240f7696ed5443da10907d1035d 145 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 116 2.0E-21 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 P40_07485 8b76bb7b8f0af07179311e5f20f3a866 152 SUPERFAMILY SSF54637 3 147 7.13E-27 T 13-10-2018 IPR029069 HotDog domain superfamily P40_07485 8b76bb7b8f0af07179311e5f20f3a866 152 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 6 147 2.0E-31 T 13-10-2018 IPR012660 Thioesterase, putative P40_07485 8b76bb7b8f0af07179311e5f20f3a866 152 Gene3D G3DSA:3.10.129.10 1 148 2.7E-36 T 13-10-2018 P40_14035 d5048f2bc8291079608574da276d7529 227 SUPERFAMILY SSF52540 5 215 2.89E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_14035 d5048f2bc8291079608574da276d7529 227 Gene3D G3DSA:3.40.50.300 3 218 5.2E-53 T 13-10-2018 P40_14035 d5048f2bc8291079608574da276d7529 227 Pfam PF00005 ABC transporter 25 171 3.9E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_14035 d5048f2bc8291079608574da276d7529 227 SMART SM00382 30 219 1.1E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_16770 72563a099bfe9ac29a692923ca46e90a 214 Pfam PF05494 MlaC protein 34 199 3.4E-41 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC P40_16770 72563a099bfe9ac29a692923ca46e90a 214 PIRSF PIRSF004649 3 212 2.6E-57 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC P40_16770 72563a099bfe9ac29a692923ca46e90a 214 Gene3D G3DSA:3.10.450.710 25 206 2.6E-52 T 13-10-2018 P40_21135 60c840b7aa3afefea96ad7ccc8f8f984 145 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 118 3.3E-12 T 13-10-2018 P40_21135 60c840b7aa3afefea96ad7ccc8f8f984 145 Gene3D G3DSA:3.10.180.10 1 145 3.5E-63 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_21135 60c840b7aa3afefea96ad7ccc8f8f984 145 SUPERFAMILY SSF54593 3 142 2.75E-34 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_00565 94eb6d6fc4bed71be339c8236a4f2c36 176 Pfam PF11086 Protein of unknown function (DUF2878) 9 163 1.3E-31 T 13-10-2018 IPR021306 Protein of unknown function DUF2878 P40_08050 bd3f45cdb1e07fcb20895f2b2ea2c6b1 736 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 525 729 2.0E-52 T 13-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 P40_08050 bd3f45cdb1e07fcb20895f2b2ea2c6b1 736 Pfam PF02706 Chain length determinant protein 17 108 1.2E-17 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 P40_08050 bd3f45cdb1e07fcb20895f2b2ea2c6b1 736 Pfam PF13614 AAA domain 549 705 8.1E-13 T 13-10-2018 IPR025669 AAA domain P40_08050 bd3f45cdb1e07fcb20895f2b2ea2c6b1 736 Pfam PF13807 G-rich domain on putative tyrosine kinase 381 462 3.3E-34 T 13-10-2018 IPR032807 Tyrosine kinase, G-rich domain P40_08050 bd3f45cdb1e07fcb20895f2b2ea2c6b1 736 SUPERFAMILY SSF52540 544 722 5.78E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_08050 bd3f45cdb1e07fcb20895f2b2ea2c6b1 736 Gene3D G3DSA:3.40.50.300 455 735 9.8E-81 T 13-10-2018 P40_10880 e684971bf2aef271130766b44eb7ac2a 322 SUPERFAMILY SSF53474 43 315 3.51E-50 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_10880 e684971bf2aef271130766b44eb7ac2a 322 Pfam PF00561 alpha/beta hydrolase fold 69 299 9.1E-20 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_10880 e684971bf2aef271130766b44eb7ac2a 322 Gene3D G3DSA:3.40.50.1820 33 319 3.0E-56 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_10880 e684971bf2aef271130766b44eb7ac2a 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 140 153 7.1E-16 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_10880 e684971bf2aef271130766b44eb7ac2a 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 154 167 7.1E-16 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_10880 e684971bf2aef271130766b44eb7ac2a 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 109 7.1E-16 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_10880 e684971bf2aef271130766b44eb7ac2a 322 PRINTS PR00111 Alpha/beta hydrolase fold signature 260 274 7.1E-16 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_05175 bc595b56d4e90efd4b10160780158311 127 SUPERFAMILY SSF54427 10 114 3.2E-20 T 13-10-2018 IPR032710 NTF2-like domain superfamily P40_05175 bc595b56d4e90efd4b10160780158311 127 Pfam PF12680 SnoaL-like domain 14 114 5.1E-15 T 13-10-2018 IPR037401 SnoaL-like domain P40_05175 bc595b56d4e90efd4b10160780158311 127 Gene3D G3DSA:3.10.450.50 3 123 5.7E-30 T 13-10-2018 P40_11520 13d728b7dca92fcf2c3825dc07021cce 300 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 291 3.4E-45 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 P40_11520 13d728b7dca92fcf2c3825dc07021cce 300 PIRSF PIRSF026649 1 300 3.5E-90 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 P40_16155 c58f4e6c354ad8aa580605eb7f621a32 94 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 11 83 2.7E-13 T 13-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 P40_16155 c58f4e6c354ad8aa580605eb7f621a32 94 Pfam PF04316 Anti-sigma-28 factor, FlgM 31 81 4.8E-9 T 13-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal P40_16155 c58f4e6c354ad8aa580605eb7f621a32 94 SUPERFAMILY SSF101498 3 83 4.58E-10 T 13-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily P40_07705 16653b627043bba52de3b35ab76e1c9e 389 Pfam PF08495 FIST N domain 37 235 4.4E-36 T 13-10-2018 IPR013702 FIST domain, N-terminal P40_07705 16653b627043bba52de3b35ab76e1c9e 389 SMART SM01204 238 368 1.7E-26 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 P40_07705 16653b627043bba52de3b35ab76e1c9e 389 Pfam PF10442 FIST C domain 238 366 5.8E-14 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 P40_07705 16653b627043bba52de3b35ab76e1c9e 389 SMART SM00897 33 237 7.3E-55 T 13-10-2018 IPR013702 FIST domain, N-terminal P40_08955 77e6ae6e5455348360acc429749794d8 422 Pfam PF08874 Domain of unknown function (DUF1835) 114 206 3.0E-10 T 13-10-2018 IPR014973 Protein of unknown function DUF1835 P40_08860 ea7545702ccaabdd1914ceb7ac4bed92 328 Pfam PF02371 Transposase IS116/IS110/IS902 family 197 283 2.9E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_08860 ea7545702ccaabdd1914ceb7ac4bed92 328 Pfam PF01548 Transposase 5 150 1.6E-26 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_05955 b1045a863c9f19f3b3307bf2cdcc5d70 121 SMART SM00530 25 81 2.8E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_05955 b1045a863c9f19f3b3307bf2cdcc5d70 121 Gene3D G3DSA:1.10.260.40 8 86 7.8E-10 T 13-10-2018 P40_05955 b1045a863c9f19f3b3307bf2cdcc5d70 121 SUPERFAMILY SSF47413 21 83 1.98E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_05955 b1045a863c9f19f3b3307bf2cdcc5d70 121 Pfam PF01381 Helix-turn-helix 26 67 4.2E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_02095 b113a39027dee9b12ac0bed283955161 400 SUPERFAMILY SSF53335 85 392 7.45E-69 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_02095 b113a39027dee9b12ac0bed283955161 400 Gene3D G3DSA:2.30.130.10 7 76 3.0E-18 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 P40_02095 b113a39027dee9b12ac0bed283955161 400 Gene3D G3DSA:3.30.750.80 81 184 4.8E-32 T 13-10-2018 P40_02095 b113a39027dee9b12ac0bed283955161 400 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 178 343 3.1E-14 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 P40_02095 b113a39027dee9b12ac0bed283955161 400 Gene3D G3DSA:3.40.50.150 185 398 3.9E-66 T 13-10-2018 P40_02095 b113a39027dee9b12ac0bed283955161 400 SUPERFAMILY SSF88697 6 76 1.34E-10 T 13-10-2018 IPR015947 PUA-like superfamily P40_12090 e257fb5d88b36a836fcc14ad5bf45de1 210 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 30 190 36.12 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 P40_12090 e257fb5d88b36a836fcc14ad5bf45de1 210 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 33 181 7.8E-53 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 P40_12090 e257fb5d88b36a836fcc14ad5bf45de1 210 Gene3D G3DSA:3.30.1060.10 13 195 6.7E-65 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 P40_12090 e257fb5d88b36a836fcc14ad5bf45de1 210 Pfam PF01625 Peptide methionine sulfoxide reductase 33 184 9.9E-60 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 P40_12090 e257fb5d88b36a836fcc14ad5bf45de1 210 SUPERFAMILY SSF55068 25 196 2.75E-67 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 P40_10725 78fa7f34e74acea7efd3e1fc016e6d2d 225 Gene3D G3DSA:3.40.50.1000 5 208 6.7E-74 T 13-10-2018 IPR023214 HAD superfamily P40_10725 78fa7f34e74acea7efd3e1fc016e6d2d 225 SUPERFAMILY SSF56784 1 207 1.53E-56 T 13-10-2018 IPR036412 HAD-like superfamily P40_10725 78fa7f34e74acea7efd3e1fc016e6d2d 225 Gene3D G3DSA:1.10.720.60 17 99 6.7E-74 T 13-10-2018 P40_10725 78fa7f34e74acea7efd3e1fc016e6d2d 225 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 3 208 8.4E-79 T 13-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 P40_10725 78fa7f34e74acea7efd3e1fc016e6d2d 225 Pfam PF00702 haloacid dehalogenase-like hydrolase 3 197 6.0E-6 T 13-10-2018 P40_10725 78fa7f34e74acea7efd3e1fc016e6d2d 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 115 128 1.2E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_10725 78fa7f34e74acea7efd3e1fc016e6d2d 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 192 205 1.2E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_10725 78fa7f34e74acea7efd3e1fc016e6d2d 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 165 185 1.2E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_10725 78fa7f34e74acea7efd3e1fc016e6d2d 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.2E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_10725 78fa7f34e74acea7efd3e1fc016e6d2d 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 105 197 2.6E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_10725 78fa7f34e74acea7efd3e1fc016e6d2d 225 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 2 223 40.889 T 13-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 P40_10205 bf66d59bb12fd77e664428d2430f3e9b 179 Pfam PF11072 Protein of unknown function (DUF2859) 30 176 5.2E-50 T 13-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 P40_10205 bf66d59bb12fd77e664428d2430f3e9b 179 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 74 179 1.5E-37 T 13-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 P40_10710 d55101ab9cb1c92cea887b2bb83b8dec 258 Pfam PF04338 Protein of unknown function, DUF481 40 258 4.3E-58 T 13-10-2018 IPR007433 Protein of unknown function DUF481 P40_16690 65d591862c5d7e0f8f8dafd940c80639 616 Gene3D G3DSA:2.60.40.10 53 116 3.0E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold P40_18990 be121997e4da82ee5eb4aa16817b935d 327 SUPERFAMILY SSF55961 117 321 7.78E-25 T 13-10-2018 P40_18990 be121997e4da82ee5eb4aa16817b935d 327 Gene3D G3DSA:2.102.10.10 5 134 3.9E-34 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_18990 be121997e4da82ee5eb4aa16817b935d 327 Pfam PF00355 Rieske [2Fe-2S] domain 10 89 1.7E-18 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 P40_18990 be121997e4da82ee5eb4aa16817b935d 327 Gene3D G3DSA:3.30.530.90 138 325 1.4E-7 T 13-10-2018 P40_18990 be121997e4da82ee5eb4aa16817b935d 327 SUPERFAMILY SSF50022 4 125 6.42E-31 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_08690 e63106688d8cfd5535ea32f23d1da8f2 156 Pfam PF03734 L,D-transpeptidase catalytic domain 2 152 6.7E-16 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 P40_08690 e63106688d8cfd5535ea32f23d1da8f2 156 SUPERFAMILY SSF141523 2 155 1.83E-22 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like P40_08690 e63106688d8cfd5535ea32f23d1da8f2 156 Gene3D G3DSA:2.40.440.10 1 156 2.4E-25 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like P40_03535 dbd6b1a5a105e7b5257cbe6c05634789 131 SUPERFAMILY SSF54427 5 125 5.27E-34 T 13-10-2018 IPR032710 NTF2-like domain superfamily P40_03535 dbd6b1a5a105e7b5257cbe6c05634789 131 Pfam PF11533 Protein of unknown function (DUF3225) 5 125 5.0E-52 T 13-10-2018 IPR024507 Protein of unknown function DUF3225 P40_03535 dbd6b1a5a105e7b5257cbe6c05634789 131 Gene3D G3DSA:3.10.450.50 1 126 2.0E-46 T 13-10-2018 P40_17715 1c6e9bb09d87694280ab0c9639ebfc1b 138 Gene3D G3DSA:3.40.50.10110 1 138 1.3E-43 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily P40_17715 1c6e9bb09d87694280ab0c9639ebfc1b 138 Pfam PF04364 DNA polymerase III chi subunit, HolC 2 133 5.2E-35 T 13-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 P40_17715 1c6e9bb09d87694280ab0c9639ebfc1b 138 SUPERFAMILY SSF102400 2 137 3.4E-38 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily P40_14105 ef46af9e23d4cc48e2281ecf2d77a1bf 295 Gene3D G3DSA:1.10.10.10 5 91 2.6E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_14105 ef46af9e23d4cc48e2281ecf2d77a1bf 295 SUPERFAMILY SSF46785 6 112 2.9E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_14105 ef46af9e23d4cc48e2281ecf2d77a1bf 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_14105 ef46af9e23d4cc48e2281ecf2d77a1bf 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_14105 ef46af9e23d4cc48e2281ecf2d77a1bf 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.7E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_14105 ef46af9e23d4cc48e2281ecf2d77a1bf 295 Gene3D G3DSA:3.40.190.290 92 295 3.2E-35 T 13-10-2018 P40_14105 ef46af9e23d4cc48e2281ecf2d77a1bf 295 SUPERFAMILY SSF53850 92 294 1.29E-31 T 13-10-2018 P40_14105 ef46af9e23d4cc48e2281ecf2d77a1bf 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.5E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_14105 ef46af9e23d4cc48e2281ecf2d77a1bf 295 Pfam PF03466 LysR substrate binding domain 91 290 7.0E-31 T 13-10-2018 IPR005119 LysR, substrate-binding P40_06390 718588fcd9558584b914986f98018d2b 109 Gene3D G3DSA:3.40.30.10 4 109 1.7E-17 T 13-10-2018 P40_06390 718588fcd9558584b914986f98018d2b 109 SUPERFAMILY SSF52833 20 103 4.97E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_06390 718588fcd9558584b914986f98018d2b 109 Pfam PF00085 Thioredoxin 15 101 6.9E-11 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 P40_10275 9722ffb920728ac0a9499372d28d6653 249 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 4 215 4.0E-61 T 13-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 P40_10275 9722ffb920728ac0a9499372d28d6653 249 Pfam PF08900 Domain of unknown function (DUF1845) 3 215 6.0E-65 T 13-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 P40_12735 2f06fc322a296a1d644859e7f33e6da1 314 Pfam PF01882 Protein of unknown function DUF58 206 281 7.6E-11 T 13-10-2018 IPR002881 Domain of unknown function DUF58 P40_05170 515477eb4f30509617603fa90ef4653f 288 Gene3D G3DSA:3.60.15.10 2 288 3.0E-111 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_05170 515477eb4f30509617603fa90ef4653f 288 Pfam PF00753 Metallo-beta-lactamase superfamily 14 205 5.3E-20 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_05170 515477eb4f30509617603fa90ef4653f 288 SMART SM00849 15 205 1.1E-20 T 13-10-2018 IPR001279 Metallo-beta-lactamase P40_05170 515477eb4f30509617603fa90ef4653f 288 SUPERFAMILY SSF56281 10 254 2.44E-46 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P40_21360 f6968e899b5c787289bdc89048fb762d 209 Gene3D G3DSA:3.40.50.10610 51 201 1.4E-5 T 13-10-2018 P40_21360 f6968e899b5c787289bdc89048fb762d 209 Pfam PF13036 Peptidoglycan-synthase activator LpoB 51 197 2.0E-29 T 13-10-2018 IPR014094 Penicillin-binding protein activator LpoB P40_16040 173d200ff3a22853d4ebfbbb701262fe 236 Pfam PF02108 Flagellar assembly protein FliH 99 221 1.3E-35 T 13-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE P40_16040 173d200ff3a22853d4ebfbbb701262fe 236 PRINTS PR01003 Flagellar assembly protein FliH signature 119 136 2.8E-33 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 P40_16040 173d200ff3a22853d4ebfbbb701262fe 236 PRINTS PR01003 Flagellar assembly protein FliH signature 137 159 2.8E-33 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 P40_16040 173d200ff3a22853d4ebfbbb701262fe 236 PRINTS PR01003 Flagellar assembly protein FliH signature 205 230 2.8E-33 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 P40_16040 173d200ff3a22853d4ebfbbb701262fe 236 PRINTS PR01003 Flagellar assembly protein FliH signature 80 98 2.8E-33 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 P40_16040 173d200ff3a22853d4ebfbbb701262fe 236 PRINTS PR01003 Flagellar assembly protein FliH signature 160 187 2.8E-33 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 P40_16040 173d200ff3a22853d4ebfbbb701262fe 236 PRINTS PR01003 Flagellar assembly protein FliH signature 188 204 2.8E-33 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 P40_16040 173d200ff3a22853d4ebfbbb701262fe 236 PRINTS PR01003 Flagellar assembly protein FliH signature 9 28 2.8E-33 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 P40_16040 173d200ff3a22853d4ebfbbb701262fe 236 PRINTS PR01003 Flagellar assembly protein FliH signature 57 79 2.8E-33 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 P40_16040 173d200ff3a22853d4ebfbbb701262fe 236 PRINTS PR01003 Flagellar assembly protein FliH signature 99 118 2.8E-33 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 P40_17460 9ef6625a3a271d14725669134bc892c1 75 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 4 75 4.4E-15 T 13-10-2018 IPR021676 Protein of unknown function DUF3262 P40_17460 9ef6625a3a271d14725669134bc892c1 75 Pfam PF11660 Protein of unknown function (DUF3262) 2 74 2.8E-17 T 13-10-2018 IPR021676 Protein of unknown function DUF3262 P40_07440 085ddf6115fd0d6a9c188fd78bc6e5d5 225 Gene3D G3DSA:3.40.50.1240 22 197 3.6E-12 T 13-10-2018 IPR029033 Histidine phosphatase superfamily P40_07440 085ddf6115fd0d6a9c188fd78bc6e5d5 225 SUPERFAMILY SSF53254 24 193 1.02E-15 T 13-10-2018 IPR029033 Histidine phosphatase superfamily P40_07440 085ddf6115fd0d6a9c188fd78bc6e5d5 225 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 23 183 2.0E-8 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 P40_03460 ef625f00b33b33499fbf343bf256a5a0 390 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 42 356 5.3E-136 T 13-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC P40_03460 ef625f00b33b33499fbf343bf256a5a0 390 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 345 2.0E-39 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_10560 c6229a51531434be650b5136eed7da0e 163 Gene3D G3DSA:2.30.110.20 1 163 1.7E-53 T 13-10-2018 IPR036624 Hcp1-like superfamily P40_10560 c6229a51531434be650b5136eed7da0e 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 8 141 2.1E-25 T 13-10-2018 IPR008514 Type VI secretion system effector, Hcp P40_10560 c6229a51531434be650b5136eed7da0e 163 Pfam PF05638 Type VI secretion system effector, Hcp 5 137 1.8E-38 T 13-10-2018 IPR008514 Type VI secretion system effector, Hcp P40_10560 c6229a51531434be650b5136eed7da0e 163 SUPERFAMILY SSF141452 1 160 8.5E-45 T 13-10-2018 IPR036624 Hcp1-like superfamily P40_19450 bcf77b02e0efb33ffbef67f40ec4e5ed 235 Gene3D G3DSA:3.40.50.10090 33 163 8.9E-56 T 13-10-2018 P40_19450 bcf77b02e0efb33ffbef67f40ec4e5ed 235 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 227 3.3E-31 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_19450 bcf77b02e0efb33ffbef67f40ec4e5ed 235 SUPERFAMILY SSF69618 1 230 1.24E-43 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P40_19450 bcf77b02e0efb33ffbef67f40ec4e5ed 235 Gene3D G3DSA:3.40.50.10090 4 225 8.9E-56 T 13-10-2018 P40_19045 8fbbf56ee965cc7fdaba124df5daac82 404 Gene3D G3DSA:1.10.760.10 301 403 6.4E-5 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_19045 8fbbf56ee965cc7fdaba124df5daac82 404 Pfam PF06181 Urate oxidase N-terminal 4 297 1.1E-131 T 13-10-2018 IPR010389 Urate oxidase N-terminal P40_19045 8fbbf56ee965cc7fdaba124df5daac82 404 SUPERFAMILY SSF46626 291 398 1.34E-7 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P40_14830 0048c7950d44d98a6e97d164f290c8c2 323 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 319 1.0E-115 T 13-10-2018 IPR017686 Phage/plasmid-like protein P40_14830 0048c7950d44d98a6e97d164f290c8c2 323 Pfam PF06067 Domain of unknown function (DUF932) 77 303 7.1E-77 T 13-10-2018 IPR026325 Protein of unknown function DUF932 P40_18770 a4a978aa1cb9782229eb39f74b009ff0 134 Gene3D G3DSA:1.10.10.10 1 82 1.5E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_18770 a4a978aa1cb9782229eb39f74b009ff0 134 Pfam PF01475 Ferric uptake regulator family 8 128 4.9E-45 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 P40_18770 a4a978aa1cb9782229eb39f74b009ff0 134 Gene3D G3DSA:3.30.1490.190 83 134 1.4E-18 T 13-10-2018 P40_18770 a4a978aa1cb9782229eb39f74b009ff0 134 SUPERFAMILY SSF46785 4 128 1.06E-40 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_02855 7528489aacc876ff8c264a6206367086 332 Gene3D G3DSA:3.30.1490.20 40 113 4.4E-5 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P40_02855 7528489aacc876ff8c264a6206367086 332 Pfam PF14397 Sugar-transfer associated ATP-grasp 20 289 2.0E-95 T 13-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 P40_02855 7528489aacc876ff8c264a6206367086 332 SUPERFAMILY SSF56059 41 281 2.73E-20 T 13-10-2018 P40_02855 7528489aacc876ff8c264a6206367086 332 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 321 1.0E-145 T 13-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein P40_21480 9cae6b3638ea9291cd16469369f73b26 382 Gene3D G3DSA:3.40.50.2300 33 354 2.7E-80 T 13-10-2018 P40_21480 9cae6b3638ea9291cd16469369f73b26 382 SUPERFAMILY SSF53822 25 380 1.28E-80 T 13-10-2018 IPR028082 Periplasmic binding protein-like I P40_21480 9cae6b3638ea9291cd16469369f73b26 382 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 5.5E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_21480 9cae6b3638ea9291cd16469369f73b26 382 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 5.5E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_21480 9cae6b3638ea9291cd16469369f73b26 382 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 5.5E-8 T 13-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 P40_21480 9cae6b3638ea9291cd16469369f73b26 382 Pfam PF13458 Periplasmic binding protein 25 377 8.6E-66 T 13-10-2018 IPR028081 Leucine-binding protein domain P40_21480 9cae6b3638ea9291cd16469369f73b26 382 Gene3D G3DSA:3.40.50.2300 145 276 2.7E-80 T 13-10-2018 P40_13955 9b73c25375ce6431b247db643024e6b9 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 376 5.9E-115 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 P40_13955 9b73c25375ce6431b247db643024e6b9 384 Gene3D G3DSA:1.20.1090.10 184 384 8.3E-62 T 13-10-2018 P40_13955 9b73c25375ce6431b247db643024e6b9 384 SUPERFAMILY SSF56796 5 383 3.27E-117 T 13-10-2018 P40_13955 9b73c25375ce6431b247db643024e6b9 384 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 P40_13955 9b73c25375ce6431b247db643024e6b9 384 Gene3D G3DSA:3.40.50.1970 1 182 2.7E-51 T 13-10-2018 P40_17970 37d175ce43c78b91f6bbf7d9311d0a5d 63 Pfam PF14255 Cysteine-rich CPXCG 9 58 1.4E-19 T 13-10-2018 IPR025990 Cysteine-rich CPXCG protein P40_17970 37d175ce43c78b91f6bbf7d9311d0a5d 63 PIRSF PIRSF037225 1 63 2.4E-19 T 13-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 P40_18425 d8221b1e6e6d5b1a3bdd038f363ca623 145 Pfam PF04519 Polymer-forming cytoskeletal 17 116 2.7E-26 T 13-10-2018 IPR007607 Bactofilin A/B P40_08960 0e6d064efe46db2f74b74d2fee10daef 298 Gene3D G3DSA:3.40.50.1820 2 292 8.4E-69 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_08960 0e6d064efe46db2f74b74d2fee10daef 298 SUPERFAMILY SSF53474 33 293 3.21E-57 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_08960 0e6d064efe46db2f74b74d2fee10daef 298 Pfam PF07859 alpha/beta hydrolase fold 67 271 6.0E-51 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 P40_05405 9ea407b6d617de8b1b342ddf27eea738 109 Pfam PF08850 Domain of unknown function (DUF1820) 6 101 2.1E-45 T 13-10-2018 IPR014949 Protein of unknown function DUF1820 P40_05405 9ea407b6d617de8b1b342ddf27eea738 109 PIRSF PIRSF028538 1 107 4.5E-46 T 13-10-2018 IPR014949 Protein of unknown function DUF1820 P40_06560 d3e0a1120b154044e35f29a9a0c0fb8a 266 Pfam PF01578 Cytochrome C assembly protein 43 263 3.7E-27 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 P40_03515 1fba57f4a3ef576a547ad8993920dda6 340 Hamap MF_01243 Formamidase [amiF]. 2 330 67.749 T 13-10-2018 IPR022843 Formamidase GO:0004328|GO:0006807 KEGG: 00460+3.5.1.49|KEGG: 00630+3.5.1.49|KEGG: 00910+3.5.1.49|MetaCyc: PWY-7142 P40_03515 1fba57f4a3ef576a547ad8993920dda6 340 SUPERFAMILY SSF56317 15 276 4.97E-54 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P40_03515 1fba57f4a3ef576a547ad8993920dda6 340 Pfam PF00795 Carbon-nitrogen hydrolase 31 265 7.4E-32 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 P40_03515 1fba57f4a3ef576a547ad8993920dda6 340 Gene3D G3DSA:3.60.110.10 2 303 8.0E-99 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P40_10160 75c0a6da93c5ee52fcd651b0f9fd3687 299 Pfam PF11920 Protein of unknown function (DUF3438) 20 288 8.1E-102 T 13-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 P40_10160 75c0a6da93c5ee52fcd651b0f9fd3687 299 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 25 279 2.4E-85 T 13-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 P40_07965 82a1fc32156a387259998671e323c645 100 SUPERFAMILY SSF47413 37 88 7.42E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_07965 82a1fc32156a387259998671e323c645 100 SMART SM00530 38 92 2.2E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_07965 82a1fc32156a387259998671e323c645 100 Pfam PF13560 Helix-turn-helix domain 39 91 9.1E-10 T 13-10-2018 P40_07965 82a1fc32156a387259998671e323c645 100 Gene3D G3DSA:1.10.260.40 2 95 3.4E-20 T 13-10-2018 P40_18080 2158ed28084b3952181a7fecd5b7b8d6 455 Pfam PF07690 Major Facilitator Superfamily 22 193 8.5E-27 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_18080 2158ed28084b3952181a7fecd5b7b8d6 455 Pfam PF07690 Major Facilitator Superfamily 219 387 4.0E-17 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_18080 2158ed28084b3952181a7fecd5b7b8d6 455 SUPERFAMILY SSF103473 20 389 8.11E-61 T 13-10-2018 IPR036259 MFS transporter superfamily P40_18080 2158ed28084b3952181a7fecd5b7b8d6 455 Gene3D G3DSA:1.20.1250.20 12 389 5.2E-75 T 13-10-2018 P40_01590 4a7377bba140e4c6474bf21abc25a00b 207 SUPERFAMILY SSF53335 7 205 1.03E-36 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_01590 4a7377bba140e4c6474bf21abc25a00b 207 Pfam PF13649 Methyltransferase domain 43 136 3.4E-20 T 13-10-2018 P40_01590 4a7377bba140e4c6474bf21abc25a00b 207 Gene3D G3DSA:3.40.50.150 4 206 1.1E-35 T 13-10-2018 P40_15720 632104560c8496fa5961dd7a553254ba 170 Pfam PF06945 Protein of unknown function (DUF1289) 8 53 1.7E-16 T 13-10-2018 IPR010710 Protein of unknown function DUF1289 P40_19180 3aeff8ee0b8348b49413c03dd7e62863 258 Gene3D G3DSA:3.40.50.720 2 256 7.2E-83 T 13-10-2018 P40_19180 3aeff8ee0b8348b49413c03dd7e62863 258 SUPERFAMILY SSF51735 4 255 1.09E-79 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_19180 3aeff8ee0b8348b49413c03dd7e62863 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 193 8.4E-4 T 13-10-2018 P40_19180 3aeff8ee0b8348b49413c03dd7e62863 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 6.8E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19180 3aeff8ee0b8348b49413c03dd7e62863 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 6.8E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19180 3aeff8ee0b8348b49413c03dd7e62863 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 6.8E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19180 3aeff8ee0b8348b49413c03dd7e62863 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 6.8E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19180 3aeff8ee0b8348b49413c03dd7e62863 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 6.8E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19180 3aeff8ee0b8348b49413c03dd7e62863 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 6.8E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19180 3aeff8ee0b8348b49413c03dd7e62863 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 252 1.5E-60 T 13-10-2018 P40_19180 3aeff8ee0b8348b49413c03dd7e62863 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_19180 3aeff8ee0b8348b49413c03dd7e62863 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 1.1E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19180 3aeff8ee0b8348b49413c03dd7e62863 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 1.1E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_19180 3aeff8ee0b8348b49413c03dd7e62863 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.1E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_02915 cc1cb1f5adce5c2dcf6bf9814698266b 609 Pfam PF13387 Domain of unknown function (DUF4105) 116 284 6.7E-57 T 13-10-2018 IPR025178 Domain of unknown function DUF4105 P40_16725 65d45b4448b41d8b72bf6d05ae2ac655 305 Gene3D G3DSA:3.40.50.10330 1 121 1.6E-32 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 P40_16725 65d45b4448b41d8b72bf6d05ae2ac655 305 Gene3D G3DSA:2.60.200.40 122 295 2.1E-31 T 13-10-2018 P40_16725 65d45b4448b41d8b72bf6d05ae2ac655 305 SUPERFAMILY SSF111331 1 304 5.67E-64 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily P40_16725 65d45b4448b41d8b72bf6d05ae2ac655 305 SMART SM00046 2 137 1.6E-7 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 P40_16725 65d45b4448b41d8b72bf6d05ae2ac655 305 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 117 4.2E-26 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 P40_00855 8b4fff70d6d335c17a12a51d0b1a29b6 136 Gene3D G3DSA:3.10.129.10 6 132 1.0E-25 T 13-10-2018 P40_00855 8b4fff70d6d335c17a12a51d0b1a29b6 136 SUPERFAMILY SSF54637 5 133 3.32E-21 T 13-10-2018 IPR029069 HotDog domain superfamily P40_21665 d9c1796f28e136b3dddde2ef3fcda7ec 544 Gene3D G3DSA:3.40.50.12780 4 441 3.1E-114 T 13-10-2018 P40_21665 d9c1796f28e136b3dddde2ef3fcda7ec 544 Gene3D G3DSA:3.30.300.310 442 544 1.0E-31 T 13-10-2018 P40_21665 d9c1796f28e136b3dddde2ef3fcda7ec 544 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 533 1.8E-18 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_21665 d9c1796f28e136b3dddde2ef3fcda7ec 544 SUPERFAMILY SSF56801 18 542 2.35E-138 T 13-10-2018 P40_21665 d9c1796f28e136b3dddde2ef3fcda7ec 544 Pfam PF00501 AMP-binding enzyme 27 446 9.4E-94 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_16645 b8f62057164b94459266738afc4b49f2 345 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 9 342 1.1E-150 T 13-10-2018 IPR013399 CRISPR-associated protein Csy3 P40_16645 b8f62057164b94459266738afc4b49f2 345 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 8 345 1.1E-134 T 13-10-2018 IPR013399 CRISPR-associated protein Csy3 P40_10215 698022be1053ace245b17ae4252c6c26 263 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 60 242 1.2E-57 T 13-10-2018 IPR022293 Integrating conjugative element protein, PFL4693 P40_09925 d349b46f9a7c5594fdad98e160d181c3 106 Gene3D G3DSA:3.10.20.30 2 105 1.7E-37 T 13-10-2018 IPR012675 Beta-grasp domain superfamily P40_09925 d349b46f9a7c5594fdad98e160d181c3 106 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 89 8.5E-13 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 P40_09925 d349b46f9a7c5594fdad98e160d181c3 106 PRINTS PR00355 Adrenodoxin signature 40 50 3.1E-6 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 P40_09925 d349b46f9a7c5594fdad98e160d181c3 106 PRINTS PR00355 Adrenodoxin signature 59 73 3.1E-6 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 P40_09925 d349b46f9a7c5594fdad98e160d181c3 106 PRINTS PR00355 Adrenodoxin signature 82 90 3.1E-6 T 13-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 P40_09925 d349b46f9a7c5594fdad98e160d181c3 106 SUPERFAMILY SSF54292 3 105 6.06E-32 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 P40_00550 d5048a56b11b396cff4457ca2c274b18 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 131 397 7.4E-84 T 13-10-2018 P40_00550 d5048a56b11b396cff4457ca2c274b18 418 Gene3D G3DSA:3.40.50.150 135 406 1.5E-99 T 13-10-2018 P40_00550 d5048a56b11b396cff4457ca2c274b18 418 SUPERFAMILY SSF53335 20 357 3.44E-82 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_00550 d5048a56b11b396cff4457ca2c274b18 418 PIRSF PIRSF003085 14 416 4.2E-121 T 13-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 P40_11095 21743516f6b74989b6fa5c655d67c658 253 Pfam PF01145 SPFH domain / Band 7 family 25 193 9.0E-32 T 13-10-2018 IPR001107 Band 7 domain P40_11095 21743516f6b74989b6fa5c655d67c658 253 SUPERFAMILY SSF117892 51 184 3.4E-42 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily P40_11095 21743516f6b74989b6fa5c655d67c658 253 Gene3D G3DSA:3.30.479.30 48 179 7.6E-47 T 13-10-2018 P40_11095 21743516f6b74989b6fa5c655d67c658 253 SMART SM00244 20 177 9.8E-60 T 13-10-2018 IPR001107 Band 7 domain P40_11095 21743516f6b74989b6fa5c655d67c658 253 PRINTS PR00721 Stomatin signature 74 95 4.7E-60 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_11095 21743516f6b74989b6fa5c655d67c658 253 PRINTS PR00721 Stomatin signature 27 49 4.7E-60 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_11095 21743516f6b74989b6fa5c655d67c658 253 PRINTS PR00721 Stomatin signature 172 193 4.7E-60 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_11095 21743516f6b74989b6fa5c655d67c658 253 PRINTS PR00721 Stomatin signature 109 126 4.7E-60 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_11095 21743516f6b74989b6fa5c655d67c658 253 PRINTS PR00721 Stomatin signature 153 171 4.7E-60 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_11095 21743516f6b74989b6fa5c655d67c658 253 PRINTS PR00721 Stomatin signature 129 152 4.7E-60 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_11095 21743516f6b74989b6fa5c655d67c658 253 PRINTS PR00721 Stomatin signature 197 220 4.7E-60 T 13-10-2018 IPR001972 Stomatin family GO:0016020 P40_01510 e5491bc58d913215ab1fcc3e71dd65d6 135 SUPERFAMILY SSF54593 2 132 1.18E-26 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_01510 e5491bc58d913215ab1fcc3e71dd65d6 135 Gene3D G3DSA:3.10.180.10 2 134 6.2E-44 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_01510 e5491bc58d913215ab1fcc3e71dd65d6 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 129 7.0E-17 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain P40_03400 35bb8c8e7323eaff7d38d9ed026d8762 398 Pfam PF00487 Fatty acid desaturase 117 329 1.0E-25 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 P40_07880 26436dc8c3427581df772b9946ccaaf0 133 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 129 10.596 T 13-10-2018 IPR022907 VapC family GO:0004540 P40_07880 26436dc8c3427581df772b9946ccaaf0 133 Gene3D G3DSA:3.40.50.1010 1 131 1.2E-38 T 13-10-2018 P40_07880 26436dc8c3427581df772b9946ccaaf0 133 SUPERFAMILY SSF88723 2 131 4.21E-35 T 13-10-2018 IPR029060 PIN-like domain superfamily P40_07880 26436dc8c3427581df772b9946ccaaf0 133 Pfam PF01850 PIN domain 3 123 1.7E-17 T 13-10-2018 IPR002716 PIN domain P40_10640 6631008c18ae9cda61fe926aa8849638 191 SUPERFAMILY SSF52738 3 188 6.67E-56 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal P40_10640 6631008c18ae9cda61fe926aa8849638 191 Pfam PF01339 CheB methylesterase 8 183 1.2E-55 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 P40_10640 6631008c18ae9cda61fe926aa8849638 191 Gene3D G3DSA:3.40.50.180 1 189 1.2E-59 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal P40_15385 cdc5e7336591ca4cf6e5ed869eb40881 297 Pfam PF04116 Fatty acid hydroxylase superfamily 89 223 5.8E-30 T 13-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 P40_16105 93e126915b3d819f0ca60b704b74439d 299 PRINTS PR01002 Flagellar protein FlgJ signature 207 228 1.5E-55 T 13-10-2018 P40_16105 93e126915b3d819f0ca60b704b74439d 299 PRINTS PR01002 Flagellar protein FlgJ signature 27 50 1.5E-55 T 13-10-2018 P40_16105 93e126915b3d819f0ca60b704b74439d 299 PRINTS PR01002 Flagellar protein FlgJ signature 165 183 1.5E-55 T 13-10-2018 P40_16105 93e126915b3d819f0ca60b704b74439d 299 PRINTS PR01002 Flagellar protein FlgJ signature 185 206 1.5E-55 T 13-10-2018 P40_16105 93e126915b3d819f0ca60b704b74439d 299 PRINTS PR01002 Flagellar protein FlgJ signature 271 289 1.5E-55 T 13-10-2018 P40_16105 93e126915b3d819f0ca60b704b74439d 299 PRINTS PR01002 Flagellar protein FlgJ signature 251 270 1.5E-55 T 13-10-2018 P40_16105 93e126915b3d819f0ca60b704b74439d 299 PRINTS PR01002 Flagellar protein FlgJ signature 5 25 1.5E-55 T 13-10-2018 P40_16105 93e126915b3d819f0ca60b704b74439d 299 PRINTS PR01002 Flagellar protein FlgJ signature 52 72 1.5E-55 T 13-10-2018 P40_16105 93e126915b3d819f0ca60b704b74439d 299 PRINTS PR01002 Flagellar protein FlgJ signature 229 250 1.5E-55 T 13-10-2018 P40_16105 93e126915b3d819f0ca60b704b74439d 299 PRINTS PR01002 Flagellar protein FlgJ signature 141 164 1.5E-55 T 13-10-2018 P40_16105 93e126915b3d819f0ca60b704b74439d 299 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 154 289 1.3E-21 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 P40_16105 93e126915b3d819f0ca60b704b74439d 299 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 11 287 3.7E-93 T 13-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 P40_16105 93e126915b3d819f0ca60b704b74439d 299 Gene3D G3DSA:2.10.70.40 180 232 7.7E-45 T 13-10-2018 P40_16105 93e126915b3d819f0ca60b704b74439d 299 SMART SM00047 138 299 3.5E-37 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 P40_16105 93e126915b3d819f0ca60b704b74439d 299 Pfam PF10135 Rod binding protein 49 95 1.6E-13 T 13-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal P40_16105 93e126915b3d819f0ca60b704b74439d 299 Gene3D G3DSA:1.10.530.10 146 285 7.7E-45 T 13-10-2018 P40_11375 6933d1d698738292953c20afe8ae053f 260 Gene3D G3DSA:3.40.50.150 22 190 5.7E-14 T 13-10-2018 P40_11375 6933d1d698738292953c20afe8ae053f 260 SUPERFAMILY SSF53335 83 225 1.19E-16 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_11375 6933d1d698738292953c20afe8ae053f 260 Pfam PF08241 Methyltransferase domain 87 134 1.6E-7 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 P40_14170 51813ab4244cc5576711f4f39f56ff0b 125 Pfam PF04343 Protein of unknown function, DUF488 9 116 2.0E-31 T 13-10-2018 IPR007438 Protein of unknown function DUF488 P40_14440 b9ca6aa1aa1d69756d6fae0b67823eb5 375 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 211 305 8.3E-11 T 13-10-2018 IPR024534 Domain of unknown function DUF2220 P40_03915 5b617e150b4c92df407538cab548bd3e 285 Gene3D G3DSA:3.30.40.60 170 274 6.7E-6 T 13-10-2018 P40_03915 5b617e150b4c92df407538cab548bd3e 285 Pfam PF01844 HNH endonuclease 203 252 3.2E-10 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 P40_03915 5b617e150b4c92df407538cab548bd3e 285 SMART SM00507 190 248 3.9E-10 T 13-10-2018 IPR003615 HNH nuclease P40_02140 71df2073337c9c6b4a9440acf446021c 164 PRINTS PR00502 NUDIX hydrolase family signature 34 48 1.4E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 P40_02140 71df2073337c9c6b4a9440acf446021c 164 PRINTS PR00502 NUDIX hydrolase family signature 48 63 1.4E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 P40_02140 71df2073337c9c6b4a9440acf446021c 164 SUPERFAMILY SSF55811 4 153 3.25E-29 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 P40_02140 71df2073337c9c6b4a9440acf446021c 164 Pfam PF00293 NUDIX domain 7 133 1.6E-22 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 P40_02140 71df2073337c9c6b4a9440acf446021c 164 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 P40_02140 71df2073337c9c6b4a9440acf446021c 164 Gene3D G3DSA:3.90.79.10 1 159 1.8E-40 T 13-10-2018 P40_02140 71df2073337c9c6b4a9440acf446021c 164 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 158 35.495 T 13-10-2018 IPR022927 RNA pyrophosphohydrolase RppH P40_00375 50fb1693034fb5cdc832efda94b0072c 200 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 14 193 7.6E-48 T 13-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE P40_12345 8b4ca360a1c5c90edfd64eea748c8941 830 SUPERFAMILY SSF63411 661 810 2.16E-14 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 P40_12345 8b4ca360a1c5c90edfd64eea748c8941 830 SUPERFAMILY SSF63411 15 224 2.32E-39 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 P40_12345 8b4ca360a1c5c90edfd64eea748c8941 830 Gene3D G3DSA:3.30.830.10 5 236 1.6E-50 T 13-10-2018 P40_12345 8b4ca360a1c5c90edfd64eea748c8941 830 Pfam PF00675 Insulinase (Peptidase family M16) 36 161 1.2E-25 T 13-10-2018 IPR011765 Peptidase M16, N-terminal P40_12345 8b4ca360a1c5c90edfd64eea748c8941 830 Gene3D G3DSA:3.30.830.10 633 817 3.0E-16 T 13-10-2018 P40_05315 69a7e0ebf8ae24de95391861c0755f0f 416 Pfam PF13088 BNR repeat-like domain 63 391 4.9E-74 T 13-10-2018 IPR011040 Sialidase KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 P40_05315 69a7e0ebf8ae24de95391861c0755f0f 416 SUPERFAMILY SSF50939 50 407 2.24E-32 T 13-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 P40_01930 e5719fd0549d74f6aa3a7aafe3cd7aa8 229 SUPERFAMILY SSF53474 3 220 1.48E-15 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_01930 e5719fd0549d74f6aa3a7aafe3cd7aa8 229 Gene3D G3DSA:3.40.50.1820 1 223 7.9E-14 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_10435 b0007988e13b86e865a4b503de30d270 278 Gene3D G3DSA:3.60.130.10 1 278 1.1E-73 T 13-10-2018 P40_10435 b0007988e13b86e865a4b503de30d270 278 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 275 2.5E-57 T 13-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 P40_10435 b0007988e13b86e865a4b503de30d270 278 SUPERFAMILY SSF51197 3 277 4.58E-74 T 13-10-2018 P40_20130 8a98312a707dd4b14ecea098822e1d8b 304 Pfam PF01032 FecCD transport family 2 302 3.3E-84 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 P40_20130 8a98312a707dd4b14ecea098822e1d8b 304 SUPERFAMILY SSF81345 2 302 7.85E-71 T 13-10-2018 IPR037294 ABC transporter, BtuC-like P40_20130 8a98312a707dd4b14ecea098822e1d8b 304 Gene3D G3DSA:1.10.3470.10 1 304 5.9E-90 T 13-10-2018 IPR037294 ABC transporter, BtuC-like P40_20725 69eb20c741aeb44a2d78efcce47eb6b9 166 Pfam PF06127 Protein of unknown function (DUF962) 1 154 1.4E-21 T 13-10-2018 IPR009305 Protein of unknown function DUF962 P40_19110 8091ea18cb8ce23c1ffdb885d65ae675 564 SUPERFAMILY SSF52091 448 553 6.47E-16 T 13-10-2018 IPR036513 STAS domain superfamily P40_19110 8091ea18cb8ce23c1ffdb885d65ae675 564 Pfam PF01740 STAS domain 449 552 3.4E-16 T 13-10-2018 IPR002645 STAS domain P40_19110 8091ea18cb8ce23c1ffdb885d65ae675 564 Gene3D G3DSA:3.30.750.24 439 560 5.9E-25 T 13-10-2018 IPR036513 STAS domain superfamily P40_19110 8091ea18cb8ce23c1ffdb885d65ae675 564 Pfam PF00916 Sulfate permease family 22 391 2.0E-85 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 P40_21165 a27cc4a90a89c025507d7d3375e63e98 138 SUPERFAMILY SSF54593 7 136 9.35E-30 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_21165 a27cc4a90a89c025507d7d3375e63e98 138 Gene3D G3DSA:3.10.180.10 2 138 9.1E-54 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_21165 a27cc4a90a89c025507d7d3375e63e98 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 130 3.7E-15 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain P40_06705 432faa35f23b5fd50d180830b5534305 541 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 45 492 1.3E-143 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 P40_06705 432faa35f23b5fd50d180830b5534305 541 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 7 492 1.2E-178 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 P40_01755 20c6fd7db1c175445d5d0ad36478d56f 157 Pfam PF07080 Protein of unknown function (DUF1348) 10 139 1.5E-64 T 13-10-2018 IPR009783 Protein of unknown function DUF1348 P40_01755 20c6fd7db1c175445d5d0ad36478d56f 157 Gene3D G3DSA:3.10.450.50 13 157 6.9E-77 T 13-10-2018 P40_01755 20c6fd7db1c175445d5d0ad36478d56f 157 SUPERFAMILY SSF54427 4 157 2.02E-79 T 13-10-2018 IPR032710 NTF2-like domain superfamily P40_11070 d1ada02c574b8170767eca214708d854 298 SUPERFAMILY SSF46785 4 114 1.43E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_11070 d1ada02c574b8170767eca214708d854 298 Pfam PF03466 LysR substrate binding domain 90 291 9.7E-37 T 13-10-2018 IPR005119 LysR, substrate-binding P40_11070 d1ada02c574b8170767eca214708d854 298 Gene3D G3DSA:1.10.10.10 3 91 2.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_11070 d1ada02c574b8170767eca214708d854 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.2E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 P40_11070 d1ada02c574b8170767eca214708d854 298 SUPERFAMILY SSF53850 91 292 2.71E-40 T 13-10-2018 P40_11070 d1ada02c574b8170767eca214708d854 298 Gene3D G3DSA:3.40.190.290 93 291 1.3E-52 T 13-10-2018 P40_19525 efb8524bb79e53d8550d2e33cf19d4ec 188 Pfam PF07298 NnrU protein 3 186 2.0E-57 T 13-10-2018 IPR009915 NnrU domain P40_01965 8c94e97b2796b9ec6bcacc5c2772897e 303 Pfam PF04381 Putative exonuclease, RdgC 1 297 6.3E-98 T 13-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 P40_10665 0cf4d9eec69907d9a276c9e9b686b7f2 239 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 183 1.6E-15 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 P40_10665 0cf4d9eec69907d9a276c9e9b686b7f2 239 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 2.5E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_10665 0cf4d9eec69907d9a276c9e9b686b7f2 239 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.5E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_10665 0cf4d9eec69907d9a276c9e9b686b7f2 239 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site P40_10665 0cf4d9eec69907d9a276c9e9b686b7f2 239 SUPERFAMILY SSF54523 7 92 2.12E-5 T 13-10-2018 P40_10665 0cf4d9eec69907d9a276c9e9b686b7f2 239 Gene3D G3DSA:3.55.40.10 36 216 1.1E-26 T 13-10-2018 P40_11025 653f54ea1bd6cb57583756d1db14672c 56 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 4 42 1.1E-11 T 13-10-2018 IPR008621 Cbb3-type cytochrome oxidase component P40_20140 2f11f1310a5881e760461cf5622c203c 595 Pfam PF07715 TonB-dependent Receptor Plug Domain 33 138 2.4E-25 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_20140 2f11f1310a5881e760461cf5622c203c 595 SUPERFAMILY SSF56935 19 593 5.23E-119 T 13-10-2018 P40_20140 2f11f1310a5881e760461cf5622c203c 595 Pfam PF00593 TonB dependent receptor 162 592 1.9E-54 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_20140 2f11f1310a5881e760461cf5622c203c 595 Gene3D G3DSA:2.170.130.10 19 143 5.7E-32 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_20140 2f11f1310a5881e760461cf5622c203c 595 Gene3D G3DSA:2.40.170.20 147 593 1.7E-107 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_12190 29b5196555116cc02a6d02c130773b55 91 Gene3D G3DSA:2.40.50.320 20 91 3.6E-24 T 13-10-2018 P40_12190 29b5196555116cc02a6d02c130773b55 91 Pfam PF11604 Copper binding periplasmic protein CusF 26 91 3.1E-23 T 13-10-2018 IPR021647 Copper binding periplasmic protein CusF P40_06240 62fdde297af66f5fc15c469ae5cae0e0 103 Pfam PF13417 Glutathione S-transferase, N-terminal domain 22 67 1.2E-6 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 P40_06240 62fdde297af66f5fc15c469ae5cae0e0 103 SUPERFAMILY SSF52833 10 67 2.43E-11 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_06240 62fdde297af66f5fc15c469ae5cae0e0 103 Gene3D G3DSA:3.40.30.10 13 76 2.0E-15 T 13-10-2018 P40_20995 484ce9e4a4f465defa007b5df8ba4023 289 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 135 217 1.6E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_20995 484ce9e4a4f465defa007b5df8ba4023 289 Gene3D G3DSA:3.40.50.1000 91 267 2.2E-32 T 13-10-2018 IPR023214 HAD superfamily P40_20995 484ce9e4a4f465defa007b5df8ba4023 289 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 221 2.9E-24 T 13-10-2018 P40_20995 484ce9e4a4f465defa007b5df8ba4023 289 SUPERFAMILY SSF56784 12 262 9.53E-34 T 13-10-2018 IPR036412 HAD-like superfamily P40_21155 5ff7ce9fc85c898e2b159b0d8f6566c7 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 127 2.0E-4 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain P40_21155 5ff7ce9fc85c898e2b159b0d8f6566c7 137 Gene3D G3DSA:3.30.720.110 77 135 1.3E-10 T 13-10-2018 P40_21155 5ff7ce9fc85c898e2b159b0d8f6566c7 137 SUPERFAMILY SSF54593 8 136 5.64E-20 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_21155 5ff7ce9fc85c898e2b159b0d8f6566c7 137 Gene3D G3DSA:3.30.720.120 2 66 1.0E-18 T 13-10-2018 P40_19425 7804d6a815aabb9832b0fecd2ea0c55e 427 Pfam PF04403 Paraquat-inducible protein A 54 204 5.3E-37 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like P40_19425 7804d6a815aabb9832b0fecd2ea0c55e 427 Pfam PF04403 Paraquat-inducible protein A 257 412 2.9E-56 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like P40_19425 7804d6a815aabb9832b0fecd2ea0c55e 427 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 9 411 4.9E-90 T 13-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type P40_02150 d677060bda36fe14b7dec54d4adcdf58 251 Pfam PF05742 Transport and Golgi organisation 2 1 237 3.4E-61 T 13-10-2018 IPR008551 Transport and Golgi organisation protein 2 P40_20260 2a2da6a4f9bffd710e903e6bc421180e 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 1.5E-37 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 P40_20260 2a2da6a4f9bffd710e903e6bc421180e 139 PIRSF PIRSF004681 1 139 1.9E-45 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 P40_20260 2a2da6a4f9bffd710e903e6bc421180e 139 SUPERFAMILY SSF111038 1 139 8.11E-50 T 13-10-2018 IPR035917 YjbQ-like superfamily P40_20260 2a2da6a4f9bffd710e903e6bc421180e 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 P40_20260 2a2da6a4f9bffd710e903e6bc421180e 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 8 139 3.8E-41 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 P40_20260 2a2da6a4f9bffd710e903e6bc421180e 139 Gene3D G3DSA:2.60.120.460 2 139 4.2E-41 T 13-10-2018 IPR035917 YjbQ-like superfamily P40_21120 3283718d9fc5b34010419a7b28fcdd0e 433 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 409 5.7E-67 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_21120 3283718d9fc5b34010419a7b28fcdd0e 433 Pfam PF01554 MatE 246 396 4.3E-11 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_21120 3283718d9fc5b34010419a7b28fcdd0e 433 Pfam PF01554 MatE 17 175 9.0E-23 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 P40_15400 b71f72a9a98eaa75708f8a6a917c762e 350 Gene3D G3DSA:3.40.190.170 30 349 6.2E-85 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_15400 b71f72a9a98eaa75708f8a6a917c762e 350 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 45 325 5.6E-52 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_04520 790c65f35d520b7bfd97fc14f2092aac 631 SUPERFAMILY SSF103647 223 276 6.02E-5 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 P40_07660 0116761baa0185270dba07b3eba35ea1 266 SUPERFAMILY SSF51735 7 261 7.96E-75 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_07660 0116761baa0185270dba07b3eba35ea1 266 Gene3D G3DSA:3.40.50.720 1 264 1.9E-76 T 13-10-2018 P40_07660 0116761baa0185270dba07b3eba35ea1 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_07660 0116761baa0185270dba07b3eba35ea1 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.9E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07660 0116761baa0185270dba07b3eba35ea1 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.9E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07660 0116761baa0185270dba07b3eba35ea1 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.9E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07660 0116761baa0185270dba07b3eba35ea1 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 184 0.0041 T 13-10-2018 P40_07660 0116761baa0185270dba07b3eba35ea1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.0E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07660 0116761baa0185270dba07b3eba35ea1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.0E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07660 0116761baa0185270dba07b3eba35ea1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.0E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07660 0116761baa0185270dba07b3eba35ea1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.0E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07660 0116761baa0185270dba07b3eba35ea1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 3.0E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07660 0116761baa0185270dba07b3eba35ea1 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.0E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07660 0116761baa0185270dba07b3eba35ea1 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 257 4.6E-59 T 13-10-2018 P40_16640 56bd3d53b89d83da2604ac5f3ae00c07 187 Gene3D G3DSA:3.30.70.2540 1 187 2.0E-64 T 13-10-2018 P40_16640 56bd3d53b89d83da2604ac5f3ae00c07 187 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 4 187 1.5E-68 T 13-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 P40_16640 56bd3d53b89d83da2604ac5f3ae00c07 187 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 4 187 3.2E-57 T 13-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 P40_03465 d202ca50ff5419a4eddaf2f51e5217e3 505 SUPERFAMILY SSF48371 100 204 3.74E-6 T 13-10-2018 IPR016024 Armadillo-type fold P40_03465 d202ca50ff5419a4eddaf2f51e5217e3 505 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 214 501 5.5E-131 T 13-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type P40_03465 d202ca50ff5419a4eddaf2f51e5217e3 505 Pfam PF02653 Branched-chain amino acid transport system / permease component 216 487 4.3E-51 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_18835 0734d3da8338f6ae016948fafe243172 114 Pfam PF14090 Helix-turn-helix domain 34 99 1.6E-5 T 13-10-2018 P40_05480 7fc97b10a4a0f3039b25266828b6306b 273 Gene3D G3DSA:3.40.50.300 5 272 3.8E-61 T 13-10-2018 P40_05480 7fc97b10a4a0f3039b25266828b6306b 273 SMART SM00382 43 244 1.7E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain P40_05480 7fc97b10a4a0f3039b25266828b6306b 273 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 244 266 9.3E-11 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal P40_05480 7fc97b10a4a0f3039b25266828b6306b 273 SUPERFAMILY SSF52540 17 266 3.26E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_05480 7fc97b10a4a0f3039b25266828b6306b 273 Pfam PF00005 ABC transporter 34 195 1.5E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P40_16795 2f9852b0aae7c08a1df78b3d09b73d96 220 Pfam PF03968 OstA-like protein 44 148 5.5E-18 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal P40_16795 2f9852b0aae7c08a1df78b3d09b73d96 220 Gene3D G3DSA:2.60.450.10 35 165 3.4E-28 T 13-10-2018 P40_16795 2f9852b0aae7c08a1df78b3d09b73d96 220 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 36 165 2.4E-28 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 P40_07200 79415642bb02deb6916192c3b3ac094c 298 SUPERFAMILY SSF161111 118 294 2.22E-30 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_07200 79415642bb02deb6916192c3b3ac094c 298 Gene3D G3DSA:1.20.1510.10 122 296 4.5E-10 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P40_07200 79415642bb02deb6916192c3b3ac094c 298 Pfam PF01545 Cation efflux family 127 294 2.1E-10 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 P40_07200 79415642bb02deb6916192c3b3ac094c 298 SUPERFAMILY SSF55008 33 95 1.57E-8 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 P40_01775 5607e698e90ee8e77d647f4cb6f059f7 191 Gene3D G3DSA:3.40.50.360 1 189 3.4E-52 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_01775 5607e698e90ee8e77d647f4cb6f059f7 191 SUPERFAMILY SSF52218 1 182 5.47E-39 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_01775 5607e698e90ee8e77d647f4cb6f059f7 191 Pfam PF03358 NADPH-dependent FMN reductase 6 144 1.3E-34 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 P40_12030 47d319a4de991be692707ded7ca45ccc 234 SUPERFAMILY SSF46689 33 89 3.59E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_12030 47d319a4de991be692707ded7ca45ccc 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 84 1.8E-13 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_12030 47d319a4de991be692707ded7ca45ccc 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 60 83 1.1E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_12030 47d319a4de991be692707ded7ca45ccc 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 52 1.1E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_12030 47d319a4de991be692707ded7ca45ccc 234 Gene3D G3DSA:1.10.357.10 31 224 2.3E-26 T 13-10-2018 P40_06890 b786089e4b7735825e9d5c1d7ba071ee 69 Gene3D G3DSA:3.30.1660.10 2 69 1.4E-31 T 13-10-2018 IPR025543 Dodecin-like P40_06890 b786089e4b7735825e9d5c1d7ba071ee 69 SUPERFAMILY SSF89807 5 68 1.44E-25 T 13-10-2018 IPR036694 Dodecin-like superfamily P40_06890 b786089e4b7735825e9d5c1d7ba071ee 69 Pfam PF07311 Dodecin 5 68 2.6E-29 T 13-10-2018 IPR009923 Dodecin P40_00875 7fe10427c9e4946b7080549730860241 427 Pfam PF07804 HipA-like C-terminal domain 163 389 1.1E-35 T 13-10-2018 IPR012893 HipA-like, C-terminal P40_00875 7fe10427c9e4946b7080549730860241 427 Pfam PF13657 HipA N-terminal domain 20 120 1.7E-13 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 P40_05585 1177d3927b53ead0bbbaad6f0cf8fc1e 203 Gene3D G3DSA:3.10.310.50 89 201 3.1E-28 T 13-10-2018 P40_05585 1177d3927b53ead0bbbaad6f0cf8fc1e 203 Pfam PF04536 TPM domain 98 180 7.6E-8 T 13-10-2018 IPR007621 TPM domain P40_05475 9cf1c118fa827ffeb23587461c806259 648 Pfam PF00501 AMP-binding enzyme 15 470 4.8E-90 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_05475 9cf1c118fa827ffeb23587461c806259 648 Gene3D G3DSA:3.40.50.12780 319 469 2.2E-34 T 13-10-2018 P40_05475 9cf1c118fa827ffeb23587461c806259 648 SUPERFAMILY SSF56801 7 613 1.44E-108 T 13-10-2018 P40_05475 9cf1c118fa827ffeb23587461c806259 648 Gene3D G3DSA:3.40.50.12780 2 318 6.5E-51 T 13-10-2018 P40_05475 9cf1c118fa827ffeb23587461c806259 648 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_18860 13d9fd19082d9681c536ca202cfc94cf 461 SUPERFAMILY SSF53850 33 450 6.34E-55 T 13-10-2018 P40_18860 13d9fd19082d9681c536ca202cfc94cf 461 Gene3D G3DSA:3.40.190.10 155 445 3.3E-75 T 13-10-2018 P40_18860 13d9fd19082d9681c536ca202cfc94cf 461 Gene3D G3DSA:3.40.190.10 49 407 3.3E-75 T 13-10-2018 P40_18860 13d9fd19082d9681c536ca202cfc94cf 461 Pfam PF01547 Bacterial extracellular solute-binding protein 46 367 5.2E-17 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein P40_13560 2ffa9da22e28c9315c18460180f5b1f6 229 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 4 227 2.5E-70 T 13-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 P40_13560 2ffa9da22e28c9315c18460180f5b1f6 229 Gene3D G3DSA:1.10.8.60 162 228 9.1E-17 T 13-10-2018 P40_13560 2ffa9da22e28c9315c18460180f5b1f6 229 SUPERFAMILY SSF52540 38 205 1.55E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_13560 2ffa9da22e28c9315c18460180f5b1f6 229 Pfam PF00308 Bacterial dnaA protein 92 198 8.5E-10 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA P40_13560 2ffa9da22e28c9315c18460180f5b1f6 229 Gene3D G3DSA:3.40.50.300 1 160 2.4E-29 T 13-10-2018 P40_17610 fe03114b16e3145f2a0c1c2af8291094 197 Pfam PF11679 Protein of unknown function (DUF3275) 2 194 3.2E-74 T 13-10-2018 IPR021693 Protein of unknown function DUF3275 P40_03760 afac40c75edf70cd23400557f0438703 456 Pfam PF02386 Cation transport protein 33 441 1.1E-53 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 P40_03760 afac40c75edf70cd23400557f0438703 456 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 44 428 2.2E-104 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 P40_13585 176b4da811c291354c6e4982995e2dc9 232 Pfam PF11306 Protein of unknown function (DUF3108) 11 217 4.7E-22 T 13-10-2018 IPR021457 Protein of unknown function DUF3108 P40_18845 db38335f68b4031a5b0725690ead7abd 312 Pfam PF03069 Acetamidase/Formamidase family 172 300 2.8E-22 T 13-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 P40_18845 db38335f68b4031a5b0725690ead7abd 312 Pfam PF03069 Acetamidase/Formamidase family 72 158 1.2E-9 T 13-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 P40_18845 db38335f68b4031a5b0725690ead7abd 312 SUPERFAMILY SSF141130 8 312 1.15E-85 T 13-10-2018 P40_18845 db38335f68b4031a5b0725690ead7abd 312 Gene3D G3DSA:2.60.120.580 3 137 6.5E-15 T 13-10-2018 P40_18845 db38335f68b4031a5b0725690ead7abd 312 Gene3D G3DSA:2.60.120.580 140 232 1.6E-28 T 13-10-2018 P40_18845 db38335f68b4031a5b0725690ead7abd 312 Gene3D G3DSA:3.10.28.20 234 312 9.3E-26 T 13-10-2018 P40_13675 0e343380c77640b03afe881f82c4dd19 248 SUPERFAMILY SSF53335 25 177 1.33E-20 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_13675 0e343380c77640b03afe881f82c4dd19 248 Gene3D G3DSA:3.40.50.150 12 246 2.6E-27 T 13-10-2018 P40_13675 0e343380c77640b03afe881f82c4dd19 248 Pfam PF01564 Spermine/spermidine synthase domain 60 171 5.0E-5 T 13-10-2018 P40_14590 0959d520146b1860b2dcd94fc47f16cf 868 Pfam PF11739 Dicarboxylate transport 663 858 4.3E-53 T 13-10-2018 IPR021730 Dicarboxylate transport P40_01050 a4f1d0057533227c02bc36975f719eca 395 Pfam PF00487 Fatty acid desaturase 13 215 9.9E-18 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 P40_01050 a4f1d0057533227c02bc36975f719eca 395 Pfam PF01610 Transposase 270 388 6.8E-11 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain P40_01050 a4f1d0057533227c02bc36975f719eca 395 PRINTS PR00075 Fatty acid desaturase family 1 signature 72 101 1.1E-5 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 P40_01050 a4f1d0057533227c02bc36975f719eca 395 PRINTS PR00075 Fatty acid desaturase family 1 signature 160 181 1.1E-5 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 P40_01050 a4f1d0057533227c02bc36975f719eca 395 PRINTS PR00075 Fatty acid desaturase family 1 signature 35 55 1.1E-5 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 P40_01050 a4f1d0057533227c02bc36975f719eca 395 PRINTS PR00075 Fatty acid desaturase family 1 signature 203 217 1.1E-5 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 P40_07245 9e717ac8bc4b742450ce2fbcf1c487cf 342 SMART SM00028 112 145 0.0023 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_07245 9e717ac8bc4b742450ce2fbcf1c487cf 342 SMART SM00028 148 182 490.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P40_07245 9e717ac8bc4b742450ce2fbcf1c487cf 342 Pfam PF13432 Tetratricopeptide repeat 116 182 1.1E-6 T 13-10-2018 P40_07245 9e717ac8bc4b742450ce2fbcf1c487cf 342 SUPERFAMILY SSF48452 105 210 1.8E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_07245 9e717ac8bc4b742450ce2fbcf1c487cf 342 Gene3D G3DSA:1.25.40.10 99 241 2.5E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_03575 d0418a747fc2d186fa33c350b8c39871 286 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 52 284 8.4E-75 T 13-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 P40_03575 d0418a747fc2d186fa33c350b8c39871 286 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 13 286 46.809 T 13-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 P40_03575 d0418a747fc2d186fa33c350b8c39871 286 Pfam PF02666 Phosphatidylserine decarboxylase 66 283 3.4E-59 T 13-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 P40_03795 7dd924faa3bdab3f56f689c08f7cc740 263 Gene3D G3DSA:1.10.10.10 204 260 3.3E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_03795 7dd924faa3bdab3f56f689c08f7cc740 263 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 218 1.5E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_03795 7dd924faa3bdab3f56f689c08f7cc740 263 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 218 234 1.5E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_03795 7dd924faa3bdab3f56f689c08f7cc740 263 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 234 246 1.5E-5 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_03795 7dd924faa3bdab3f56f689c08f7cc740 263 Pfam PF00196 Bacterial regulatory proteins, luxR family 203 256 1.2E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_03795 7dd924faa3bdab3f56f689c08f7cc740 263 SUPERFAMILY SSF46894 194 259 1.43E-13 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 P40_03795 7dd924faa3bdab3f56f689c08f7cc740 263 SMART SM00421 201 258 6.5E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 P40_19590 7c1ae99ecb0e0f0d16ed87ab161f54fa 217 Gene3D G3DSA:3.40.50.880 1 217 3.1E-87 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_19590 7c1ae99ecb0e0f0d16ed87ab161f54fa 217 Pfam PF01965 DJ-1/PfpI family 13 189 1.9E-9 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 P40_19590 7c1ae99ecb0e0f0d16ed87ab161f54fa 217 SUPERFAMILY SSF52317 2 216 1.19E-57 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like P40_19590 7c1ae99ecb0e0f0d16ed87ab161f54fa 217 PIRSF PIRSF006320 1 216 3.1E-96 T 13-10-2018 IPR026041 Glyoxalase ElbB P40_01895 fb6929a996295a234f03d7ec03fa7c93 486 Gene3D G3DSA:3.90.1300.10 1 480 1.6E-133 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_01895 fb6929a996295a234f03d7ec03fa7c93 486 Pfam PF01425 Amidase 24 466 1.4E-105 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_01895 fb6929a996295a234f03d7ec03fa7c93 486 SUPERFAMILY SSF75304 2 475 4.97E-125 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P40_07365 f81f69388f828f7832ce719d6d19da25 350 Pfam PF07995 Glucose / Sorbosone dehydrogenase 165 344 1.2E-13 T 13-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase P40_07365 f81f69388f828f7832ce719d6d19da25 350 Gene3D G3DSA:2.120.10.30 15 346 4.8E-21 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_07365 f81f69388f828f7832ce719d6d19da25 350 SUPERFAMILY SSF50952 8 347 2.22E-37 T 13-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 P40_10800 7adfc8c433c5a00a7c0b8a302cf80ab0 349 Pfam PF01343 Peptidase family S49 163 307 9.2E-44 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 P40_10800 7adfc8c433c5a00a7c0b8a302cf80ab0 349 Gene3D G3DSA:3.40.1750.20 201 267 2.7E-41 T 13-10-2018 P40_10800 7adfc8c433c5a00a7c0b8a302cf80ab0 349 Gene3D G3DSA:3.90.226.10 104 300 2.7E-41 T 13-10-2018 P40_10800 7adfc8c433c5a00a7c0b8a302cf80ab0 349 SUPERFAMILY SSF52096 101 298 1.66E-29 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_10800 7adfc8c433c5a00a7c0b8a302cf80ab0 349 Pfam PF08496 Peptidase family S49 N-terminal 2 157 2.5E-55 T 13-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 P40_08620 508d72ef7833409d2bfffa26e9139ba6 338 Pfam PF01180 Dihydroorotate dehydrogenase 43 330 3.6E-91 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 P40_08620 508d72ef7833409d2bfffa26e9139ba6 338 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 330 8.1E-126 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 P40_08620 508d72ef7833409d2bfffa26e9139ba6 338 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 76 95 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 P40_08620 508d72ef7833409d2bfffa26e9139ba6 338 PIRSF PIRSF000164 9 336 1.5E-98 T 13-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 P40_08620 508d72ef7833409d2bfffa26e9139ba6 338 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 332 48.539 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 P40_08620 508d72ef7833409d2bfffa26e9139ba6 338 SUPERFAMILY SSF51395 1 331 7.02E-103 T 13-10-2018 P40_08620 508d72ef7833409d2bfffa26e9139ba6 338 Gene3D G3DSA:3.20.20.70 2 331 2.9E-133 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_14755 b53cd6b9665a152c2c9d9d2720feb29b 85 Gene3D G3DSA:1.20.58.2000 1 79 3.0E-37 T 13-10-2018 P40_14755 b53cd6b9665a152c2c9d9d2720feb29b 85 Pfam PF11431 Membrane transport protein MerF 24 67 1.4E-23 T 13-10-2018 IPR021091 Mercury ion transport, MerF P40_12505 5eb9143da4e24cbf512959fbadc4a1da 116 Gene3D G3DSA:1.10.10.10 30 115 2.7E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_12505 5eb9143da4e24cbf512959fbadc4a1da 116 SUPERFAMILY SSF46785 33 109 2.69E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_14915 97c11c5ee7e22f1cb49bbda8b0ef5148 286 Pfam PF13276 HTH-like domain 39 92 5.8E-9 T 13-10-2018 IPR025948 HTH-like domain P40_14915 97c11c5ee7e22f1cb49bbda8b0ef5148 286 Gene3D G3DSA:3.30.420.10 116 249 1.6E-15 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P40_14915 97c11c5ee7e22f1cb49bbda8b0ef5148 286 Pfam PF00665 Integrase core domain 118 233 4.6E-30 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 P40_14915 97c11c5ee7e22f1cb49bbda8b0ef5148 286 SUPERFAMILY SSF53098 112 272 2.78E-37 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily P40_04680 5d3364f8be47154885986f19528f81b6 750 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 1 729 18.055 T 13-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 P40_04680 5d3364f8be47154885986f19528f81b6 750 Pfam PF04453 Organic solvent tolerance protein 299 664 3.7E-88 T 13-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 P40_13105 eb1f1cf347a57944973cf7ad6f2a6f31 285 Pfam PF00578 AhpC/TSA family 124 257 2.1E-15 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P40_13105 eb1f1cf347a57944973cf7ad6f2a6f31 285 Gene3D G3DSA:3.40.30.10 124 280 3.5E-20 T 13-10-2018 P40_13105 eb1f1cf347a57944973cf7ad6f2a6f31 285 SUPERFAMILY SSF52833 121 279 4.64E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_20060 963faae5af18624645b5b3d0d210ecd0 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 188 9.4E-5 T 13-10-2018 P40_20060 963faae5af18624645b5b3d0d210ecd0 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.9E-47 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20060 963faae5af18624645b5b3d0d210ecd0 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.9E-47 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20060 963faae5af18624645b5b3d0d210ecd0 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.9E-47 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20060 963faae5af18624645b5b3d0d210ecd0 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.9E-47 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20060 963faae5af18624645b5b3d0d210ecd0 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.9E-47 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20060 963faae5af18624645b5b3d0d210ecd0 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.9E-47 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20060 963faae5af18624645b5b3d0d210ecd0 250 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 5 249 5.0E-107 T 13-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 P40_20060 963faae5af18624645b5b3d0d210ecd0 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P40_20060 963faae5af18624645b5b3d0d210ecd0 250 SUPERFAMILY SSF51735 4 249 4.67E-82 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_20060 963faae5af18624645b5b3d0d210ecd0 250 Gene3D G3DSA:3.40.50.720 2 249 1.8E-80 T 13-10-2018 P40_20060 963faae5af18624645b5b3d0d210ecd0 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.4E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20060 963faae5af18624645b5b3d0d210ecd0 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20060 963faae5af18624645b5b3d0d210ecd0 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.4E-15 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_20060 963faae5af18624645b5b3d0d210ecd0 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 246 3.7E-63 T 13-10-2018 P40_18015 1de95362023a03feac6f08a781ae3254 183 SUPERFAMILY SSF56925 25 180 4.19E-17 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P40_18015 1de95362023a03feac6f08a781ae3254 183 Gene3D G3DSA:2.40.160.20 18 183 8.8E-14 T 13-10-2018 P40_18015 1de95362023a03feac6f08a781ae3254 183 Pfam PF13505 Outer membrane protein beta-barrel domain 7 178 9.1E-17 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel P40_06615 973763f9fcb838ac99cccfdaf82a4589 364 PIRSF PIRSF038945 2 359 1.3E-163 T 13-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 P40_06615 973763f9fcb838ac99cccfdaf82a4589 364 Gene3D G3DSA:3.40.50.1100 65 161 2.6E-125 T 13-10-2018 P40_06615 973763f9fcb838ac99cccfdaf82a4589 364 SUPERFAMILY SSF53686 8 362 2.1E-108 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme P40_06615 973763f9fcb838ac99cccfdaf82a4589 364 TIGRFAM TIGR00260 thrC: threonine synthase 11 330 1.7E-99 T 13-10-2018 IPR004450 Threonine synthase-like P40_06615 973763f9fcb838ac99cccfdaf82a4589 364 Gene3D G3DSA:3.40.50.1100 13 329 2.6E-125 T 13-10-2018 P40_06615 973763f9fcb838ac99cccfdaf82a4589 364 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 57 70 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 P40_06615 973763f9fcb838ac99cccfdaf82a4589 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 323 9.8E-72 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme P40_06995 606fff71d98370332862af2f864b89a9 301 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 4 236 3.0E-42 T 13-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system P40_02090 e0fc4eb6deb2a0cfb718ceee56e4dd1a 452 Pfam PF00271 Helicase conserved C-terminal domain 240 341 1.9E-27 T 13-10-2018 IPR001650 Helicase, C-terminal P40_02090 e0fc4eb6deb2a0cfb718ceee56e4dd1a 452 SMART SM00487 21 222 8.6E-54 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P40_02090 e0fc4eb6deb2a0cfb718ceee56e4dd1a 452 Gene3D G3DSA:3.40.50.300 213 443 5.1E-48 T 13-10-2018 P40_02090 e0fc4eb6deb2a0cfb718ceee56e4dd1a 452 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site P40_02090 e0fc4eb6deb2a0cfb718ceee56e4dd1a 452 SMART SM00490 259 341 1.5E-28 T 13-10-2018 IPR001650 Helicase, C-terminal P40_02090 e0fc4eb6deb2a0cfb718ceee56e4dd1a 452 Pfam PF00270 DEAD/DEAH box helicase 26 194 5.9E-44 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 P40_02090 e0fc4eb6deb2a0cfb718ceee56e4dd1a 452 SUPERFAMILY SSF52540 73 359 1.08E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_02090 e0fc4eb6deb2a0cfb718ceee56e4dd1a 452 Gene3D G3DSA:3.40.50.300 1 209 9.7E-69 T 13-10-2018 P40_01020 02bb82a0091b4c53ebb6ec2450a02fc5 395 SUPERFAMILY SSF89796 7 392 8.5E-108 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_01020 02bb82a0091b4c53ebb6ec2450a02fc5 395 Gene3D G3DSA:3.40.50.10540 10 386 1.9E-105 T 13-10-2018 IPR023606 CoA-transferase family III domain superfamily P40_01020 02bb82a0091b4c53ebb6ec2450a02fc5 395 Pfam PF02515 CoA-transferase family III 12 369 1.9E-102 T 13-10-2018 IPR003673 CoA-transferase family III GO:0003824 P40_01020 02bb82a0091b4c53ebb6ec2450a02fc5 395 Gene3D G3DSA:3.30.1540.10 231 322 1.9E-105 T 13-10-2018 P40_01795 e9ec6806244adc2d4e8ead47fe4bf9c7 435 Pfam PF02667 Short chain fatty acid transporter 1 434 4.4E-147 T 13-10-2018 IPR006160 Short chain fatty acid transporter AtoE P40_07355 b8c5ecbfae85af0f33eb375c265ce15c 65 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 55 1.4E-14 T 13-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 P40_07355 b8c5ecbfae85af0f33eb375c265ce15c 65 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 5.9E-15 T 13-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 P40_12105 3af7296343ec40ec603f5e79c9a4dd41 139 Pfam PF03061 Thioesterase superfamily 47 124 1.1E-13 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 P40_12105 3af7296343ec40ec603f5e79c9a4dd41 139 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 133 4.9E-17 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 P40_12105 3af7296343ec40ec603f5e79c9a4dd41 139 SUPERFAMILY SSF54637 17 134 7.47E-27 T 13-10-2018 IPR029069 HotDog domain superfamily P40_12105 3af7296343ec40ec603f5e79c9a4dd41 139 Gene3D G3DSA:3.10.129.10 1 138 3.8E-33 T 13-10-2018 P40_04810 fafb061fc9f0e5c1824f9e05cdcf5e9d 249 Pfam PF01925 Sulfite exporter TauE/SafE 7 239 1.1E-21 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 P40_15525 3d4abbef960119d684588ba6ac87af4a 534 Gene3D G3DSA:3.40.630.10 272 522 7.7E-12 T 13-10-2018 P40_15525 3d4abbef960119d684588ba6ac87af4a 534 SUPERFAMILY SSF53187 69 399 1.83E-10 T 13-10-2018 P40_10510 f11e589524d561824ef10c9b07723e39 332 Gene3D G3DSA:3.40.1730.10 10 233 5.6E-18 T 13-10-2018 IPR038225 T6S-associated protein TagF superfamily P40_10510 f11e589524d561824ef10c9b07723e39 332 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 13 140 7.2E-35 T 13-10-2018 IPR017748 T6S-associated protein TagF P40_10510 f11e589524d561824ef10c9b07723e39 332 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 13 135 3.8E-25 T 13-10-2018 IPR017748 T6S-associated protein TagF P40_00910 98c2d36587d5c97c94c51f7b87a76887 299 Hamap MF_00082 Acetylglutamate kinase [argB]. 25 291 49.377 T 13-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 P40_00910 98c2d36587d5c97c94c51f7b87a76887 299 PRINTS PR00474 Glutamate 5-kinase family signature 248 268 2.4E-8 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 P40_00910 98c2d36587d5c97c94c51f7b87a76887 299 PRINTS PR00474 Glutamate 5-kinase family signature 57 71 2.4E-8 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 P40_00910 98c2d36587d5c97c94c51f7b87a76887 299 PRINTS PR00474 Glutamate 5-kinase family signature 198 225 2.4E-8 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 P40_00910 98c2d36587d5c97c94c51f7b87a76887 299 TIGRFAM TIGR00761 argB: acetylglutamate kinase 27 273 1.7E-76 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 P40_00910 98c2d36587d5c97c94c51f7b87a76887 299 SUPERFAMILY SSF53633 5 298 2.62E-93 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily P40_00910 98c2d36587d5c97c94c51f7b87a76887 299 PIRSF PIRSF000728 11 298 3.8E-108 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 P40_00910 98c2d36587d5c97c94c51f7b87a76887 299 Gene3D G3DSA:3.40.1160.10 2 299 1.2E-96 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily P40_00910 98c2d36587d5c97c94c51f7b87a76887 299 Pfam PF00696 Amino acid kinase family 27 275 3.9E-43 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 P40_06670 3a79ca82c6dba87e995f62c7426b5a8c 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 193 274 4.3E-19 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_06670 3a79ca82c6dba87e995f62c7426b5a8c 314 Pfam PF01548 Transposase 10 149 3.3E-21 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_03065 f96c9cb4e4191741f00445d9344bc941 509 Gene3D G3DSA:3.50.50.60 4 176 4.1E-57 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_03065 f96c9cb4e4191741f00445d9344bc941 509 Pfam PF00743 Flavin-binding monooxygenase-like 14 348 1.6E-17 T 13-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 P40_03065 f96c9cb4e4191741f00445d9344bc941 509 SUPERFAMILY SSF51905 15 419 1.3E-57 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_03065 f96c9cb4e4191741f00445d9344bc941 509 Gene3D G3DSA:3.50.50.60 312 497 8.9E-38 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_12295 b36b4d86987f42fa8a971b701f93c002 236 Gene3D G3DSA:2.40.410.10 91 224 2.5E-17 T 13-10-2018 IPR023124 DUF3239 domain superfamily P40_12295 b36b4d86987f42fa8a971b701f93c002 236 Pfam PF11580 Protein of unknown function (DUF3239) 99 211 6.3E-14 T 13-10-2018 IPR021632 Protein of unknown function DUF3239 P40_13035 16ce99d87875ea5f0e9b584a87e58872 365 Gene3D G3DSA:3.50.50.60 7 360 7.2E-122 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_13035 16ce99d87875ea5f0e9b584a87e58872 365 Pfam PF01266 FAD dependent oxidoreductase 7 362 1.5E-51 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 P40_13035 16ce99d87875ea5f0e9b584a87e58872 365 SUPERFAMILY SSF51905 6 362 1.51E-36 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_13035 16ce99d87875ea5f0e9b584a87e58872 365 Gene3D G3DSA:3.30.9.10 86 321 7.2E-122 T 13-10-2018 P40_08315 4f5d0df0a18ed188f8e8f16b4f8d37a6 382 Pfam PF07690 Major Facilitator Superfamily 9 307 1.2E-12 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_08315 4f5d0df0a18ed188f8e8f16b4f8d37a6 382 Gene3D G3DSA:1.20.1250.20 2 374 8.1E-26 T 13-10-2018 P40_08315 4f5d0df0a18ed188f8e8f16b4f8d37a6 382 SUPERFAMILY SSF103473 6 372 4.84E-28 T 13-10-2018 IPR036259 MFS transporter superfamily P40_10530 be54d2544477f3031ad9d18744ebfba1 442 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 2 441 5.3E-144 T 13-10-2018 IPR010263 Type VI secretion protein, VC_A0114 P40_10530 be54d2544477f3031ad9d18744ebfba1 442 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 16 440 4.8E-138 T 13-10-2018 IPR010263 Type VI secretion protein, VC_A0114 P40_07780 c303709f61fbd8855fbcedb6e6e5900c 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.0E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07780 c303709f61fbd8855fbcedb6e6e5900c 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.0E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07780 c303709f61fbd8855fbcedb6e6e5900c 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.0E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07780 c303709f61fbd8855fbcedb6e6e5900c 254 Gene3D G3DSA:3.40.50.720 1 253 1.0E-86 T 13-10-2018 P40_07780 c303709f61fbd8855fbcedb6e6e5900c 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 250 2.6E-69 T 13-10-2018 P40_07780 c303709f61fbd8855fbcedb6e6e5900c 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 190 6.3E-5 T 13-10-2018 P40_07780 c303709f61fbd8855fbcedb6e6e5900c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.4E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07780 c303709f61fbd8855fbcedb6e6e5900c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.4E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07780 c303709f61fbd8855fbcedb6e6e5900c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.4E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07780 c303709f61fbd8855fbcedb6e6e5900c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 4.4E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07780 c303709f61fbd8855fbcedb6e6e5900c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 4.4E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07780 c303709f61fbd8855fbcedb6e6e5900c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.4E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P40_07780 c303709f61fbd8855fbcedb6e6e5900c 254 SUPERFAMILY SSF51735 9 253 5.2E-88 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_19795 2c2c963a24fb44952d5f791b6ff6c0c7 383 Gene3D G3DSA:2.40.128.140 65 374 3.9E-32 T 13-10-2018 IPR037107 Putative outer membrane protein superfamily P40_19795 2c2c963a24fb44952d5f791b6ff6c0c7 383 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 74 378 9.2E-61 T 13-10-2018 IPR018707 Protein of unknown function DUF2219 P40_19770 b4935936241d7d9446ead10baef83712 386 Pfam PF02353 Mycolic acid cyclopropane synthetase 111 370 8.9E-96 T 13-10-2018 P40_19770 b4935936241d7d9446ead10baef83712 386 Gene3D G3DSA:3.40.50.150 118 379 5.6E-101 T 13-10-2018 P40_19770 b4935936241d7d9446ead10baef83712 386 PIRSF PIRSF003085 13 384 2.0E-119 T 13-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 P40_19770 b4935936241d7d9446ead10baef83712 386 SUPERFAMILY SSF53335 119 376 1.01E-74 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_07210 d3266e5c0d43800ad55ac151b1cfef14 338 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 4 45 1.5E-8 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain P40_07210 d3266e5c0d43800ad55ac151b1cfef14 338 Pfam PF01610 Transposase 61 295 1.4E-62 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain P40_18605 b261da44cf96f0a25a0d8f725524c596 339 SUPERFAMILY SSF53850 115 273 2.28E-5 T 13-10-2018 P40_18605 b261da44cf96f0a25a0d8f725524c596 339 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 314 1.3E-42 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_18605 b261da44cf96f0a25a0d8f725524c596 339 Gene3D G3DSA:3.40.190.170 24 339 4.6E-76 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_06780 8b11f42751d4d32b7d25daf375ddabb8 187 Pfam PF04186 FxsA cytoplasmic membrane protein 9 115 1.2E-33 T 13-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 P40_07645 055fb2d244faadfca788462a8e1995a7 343 Gene3D G3DSA:3.90.1200.10 108 342 5.1E-95 T 13-10-2018 P40_07645 055fb2d244faadfca788462a8e1995a7 343 SUPERFAMILY SSF56112 7 334 1.18E-67 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_07645 055fb2d244faadfca788462a8e1995a7 343 Gene3D G3DSA:3.30.200.20 6 107 1.2E-39 T 13-10-2018 P40_07645 055fb2d244faadfca788462a8e1995a7 343 Pfam PF01636 Phosphotransferase enzyme family 30 249 4.8E-60 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase P40_15570 ac8e445bd3d524c2719312aacb986938 278 Pfam PF16811 TRAP transporter T-component 35 278 3.9E-81 T 13-10-2018 IPR031823 TRAP transporter T-component P40_15570 ac8e445bd3d524c2719312aacb986938 278 Gene3D G3DSA:1.25.40.920 28 278 1.3E-68 T 13-10-2018 IPR038537 TatT superfamily P40_14700 1d04d4e8afe2049a4b0aee5b89b7e7ba 173 Pfam PF15593 Immunity protein 42 1 156 2.1E-23 T 13-10-2018 IPR028958 Immunity protein 42 P40_01985 822f082d65ea8cd5a7989021374e4365 119 Pfam PF03795 YCII-related domain 1 113 4.0E-13 T 13-10-2018 IPR005545 YCII-related P40_01985 822f082d65ea8cd5a7989021374e4365 119 SUPERFAMILY SSF54909 1 115 1.66E-21 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_01985 822f082d65ea8cd5a7989021374e4365 119 Gene3D G3DSA:3.30.70.1060 1 117 3.3E-29 T 13-10-2018 P40_00680 1fe7300991705b23ea615744cb0e0736 327 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 325 2.1E-66 T 13-10-2018 IPR018707 Protein of unknown function DUF2219 P40_00680 1fe7300991705b23ea615744cb0e0736 327 Gene3D G3DSA:2.40.128.140 29 325 9.5E-36 T 13-10-2018 IPR037107 Putative outer membrane protein superfamily P40_05535 9b19a559e991adbc2771cd6f3bd2feee 238 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 5 235 2.0E-103 T 13-10-2018 IPR017792 Urea carboxylase-associated protein 2 P40_05535 9b19a559e991adbc2771cd6f3bd2feee 238 Pfam PF09347 Domain of unknown function (DUF1989) 9 180 5.6E-55 T 13-10-2018 IPR018959 Protein of unknown function DUF1989 P40_02585 ced868e4417f191f38f77dcbfeea678e 626 Gene3D G3DSA:2.130.10.10 42 280 5.5E-17 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P40_02585 ced868e4417f191f38f77dcbfeea678e 626 SUPERFAMILY SSF50969 63 332 6.36E-17 T 13-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like P40_10950 6c4d560ec72edbc7232794f6598e10d9 407 Pfam PF07670 Nucleoside recognition 274 376 3.1E-6 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 P40_10950 6c4d560ec72edbc7232794f6598e10d9 407 Pfam PF07670 Nucleoside recognition 48 155 2.5E-9 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 P40_10950 6c4d560ec72edbc7232794f6598e10d9 407 PIRSF PIRSF036542 1 407 1.2E-158 T 13-10-2018 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB P40_03775 c2b1360d5dec1258b18a1bed9335e020 260 Pfam PF04784 Protein of unknown function, DUF547 71 184 3.5E-25 T 13-10-2018 IPR006869 Domain of unknown function DUF547 P40_01200 6890a912eb2db702649025accc21706b 371 SUPERFAMILY SSF52151 41 350 1.99E-15 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase P40_12195 244b1a96afa4e273b23a3f17c101ec05 146 Pfam PF04214 Protein of unknown function, DUF 50 118 6.3E-27 T 13-10-2018 IPR007332 Protein of unknown function DUF411 P40_15775 5741211b906ef16e72d5b34798c7fb45 264 SUPERFAMILY SSF52218 1 236 8.0E-67 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_15775 5741211b906ef16e72d5b34798c7fb45 264 Gene3D G3DSA:3.40.50.360 1 259 2.3E-93 T 13-10-2018 IPR029039 Flavoprotein-like superfamily P40_15775 5741211b906ef16e72d5b34798c7fb45 264 Pfam PF02525 Flavodoxin-like fold 1 216 3.4E-56 T 13-10-2018 IPR003680 Flavodoxin-like fold P40_06930 fcdf8e121bb7311d2e454cda729c9750 132 Pfam PF13767 Domain of unknown function (DUF4168) 52 129 2.1E-20 T 13-10-2018 IPR025433 Domain of unknown function DUF4168 P40_12890 a553bac3164676959bd4ee3c8fbf964f 363 SUPERFAMILY SSF81324 15 142 8.63E-6 T 13-10-2018 P40_12890 a553bac3164676959bd4ee3c8fbf964f 363 Gene3D G3DSA:1.20.120.350 18 147 5.0E-6 T 13-10-2018 IPR027359 Voltage-dependent channel domain superfamily P40_15370 d7fe1b3a2fe40e52038450d413f8e283 555 Pfam PF02254 TrkA-N domain 413 528 4.1E-15 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 P40_15370 d7fe1b3a2fe40e52038450d413f8e283 555 Gene3D G3DSA:3.40.50.720 406 550 6.6E-27 T 13-10-2018 P40_15370 d7fe1b3a2fe40e52038450d413f8e283 555 Gene3D G3DSA:1.20.1530.20 2 384 1.9E-75 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily P40_15370 d7fe1b3a2fe40e52038450d413f8e283 555 Pfam PF00999 Sodium/hydrogen exchanger family 10 372 8.2E-53 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 P40_15370 d7fe1b3a2fe40e52038450d413f8e283 555 SUPERFAMILY SSF51735 412 540 6.13E-19 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily P40_16060 8d99ace10172f5d361936561b53e6b0b 157 Pfam PF03748 Flagellar basal body-associated protein FliL 56 157 3.6E-20 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 P40_11295 1c288963454ecd8dc4cf190c8ca0bae0 102 Gene3D G3DSA:2.102.10.10 1 100 2.6E-16 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_11295 1c288963454ecd8dc4cf190c8ca0bae0 102 Pfam PF00355 Rieske [2Fe-2S] domain 10 77 1.6E-8 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 P40_11295 1c288963454ecd8dc4cf190c8ca0bae0 102 SUPERFAMILY SSF50022 3 100 5.37E-19 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P40_02130 ebeb37bc2c7a1984bdd06e942281d112 311 Gene3D G3DSA:1.20.1420.20 15 214 2.0E-10 T 13-10-2018 IPR038352 Imelysin-like domain superfamily P40_21080 00edd4bc86a1e8db1f289dba55e51d69 199 SUPERFAMILY SSF75217 1 198 1.57E-67 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases P40_21080 00edd4bc86a1e8db1f289dba55e51d69 199 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 197 2.6E-64 T 13-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 P40_21080 00edd4bc86a1e8db1f289dba55e51d69 199 Gene3D G3DSA:3.40.1280.10 1 198 2.4E-60 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal P40_21080 00edd4bc86a1e8db1f289dba55e51d69 199 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 27.242 T 13-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 P40_16195 225795e7ebb63e20362384dcf32c2c08 573 Pfam PF12158 Protein of unknown function (DUF3592) 22 164 2.7E-29 T 13-10-2018 IPR021994 Protein of unknown function DUF3592 P40_08170 81e1823cfe48a4f0285dd436151e8565 182 Pfam PF02397 Bacterial sugar transferase 3 172 2.0E-48 T 13-10-2018 IPR003362 Bacterial sugar transferase P40_10935 bc58b7dfc64f219216b4a7005b5daf53 476 SUPERFAMILY SSF56112 101 348 3.68E-12 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_10935 bc58b7dfc64f219216b4a7005b5daf53 476 Pfam PF03109 ABC1 family 127 231 3.5E-25 T 13-10-2018 IPR004147 UbiB domain P40_05595 12edf8275e7befdcffd86973f3b012f5 79 Gene3D G3DSA:1.10.260.40 1 70 3.1E-9 T 13-10-2018 P40_05595 12edf8275e7befdcffd86973f3b012f5 79 Pfam PF13560 Helix-turn-helix domain 7 63 5.2E-7 T 13-10-2018 P40_05595 12edf8275e7befdcffd86973f3b012f5 79 SMART SM00530 10 67 7.8E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_05595 12edf8275e7befdcffd86973f3b012f5 79 SUPERFAMILY SSF47413 2 64 2.82E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_12985 d156400fe650f79c65f4525d824ea65a 126 SUPERFAMILY SSF81343 8 124 1.98E-23 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12985 d156400fe650f79c65f4525d824ea65a 126 Gene3D G3DSA:1.20.1300.10 4 124 2.1E-27 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P40_12985 d156400fe650f79c65f4525d824ea65a 126 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 13 123 1.9E-29 T 13-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 P40_12985 d156400fe650f79c65f4525d824ea65a 126 PIRSF PIRSF000169 1 125 2.8E-38 T 13-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 P40_21590 ff4b4eb928d8d3ce68dd0c65404d6131 205 SUPERFAMILY SSF53335 7 182 1.25E-30 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_21590 ff4b4eb928d8d3ce68dd0c65404d6131 205 Pfam PF02527 rRNA small subunit methyltransferase G 23 194 5.1E-49 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 P40_21590 ff4b4eb928d8d3ce68dd0c65404d6131 205 Gene3D G3DSA:3.40.50.150 1 205 1.4E-64 T 13-10-2018 P40_21590 ff4b4eb928d8d3ce68dd0c65404d6131 205 PIRSF PIRSF003078 1 205 7.1E-53 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 P40_21590 ff4b4eb928d8d3ce68dd0c65404d6131 205 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 201 27.748 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 P40_21590 ff4b4eb928d8d3ce68dd0c65404d6131 205 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 28 202 1.0E-46 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 P40_13100 e7ef02c31a954f741bffc6b757302260 358 PIRSF PIRSF001361 1 356 3.5E-156 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 P40_13100 e7ef02c31a954f741bffc6b757302260 358 SUPERFAMILY SSF51569 9 350 3.35E-133 T 13-10-2018 P40_13100 e7ef02c31a954f741bffc6b757302260 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 351 7.8E-149 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 P40_13100 e7ef02c31a954f741bffc6b757302260 358 Gene3D G3DSA:3.20.20.70 4 352 7.7E-151 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_13100 e7ef02c31a954f741bffc6b757302260 358 Pfam PF00793 DAHP synthetase I family 46 341 1.4E-92 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 P40_10690 cb831918ebf6409d885097c6e4076332 176 Gene3D G3DSA:3.30.1360.100 102 176 8.1E-8 T 13-10-2018 P40_10690 cb831918ebf6409d885097c6e4076332 176 SUPERFAMILY SSF103054 101 174 6.93E-13 T 13-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily P40_10690 cb831918ebf6409d885097c6e4076332 176 Pfam PF04612 Type II secretion system (T2SS), protein M 19 174 1.4E-32 T 13-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 P40_10690 cb831918ebf6409d885097c6e4076332 176 PIRSF PIRSF006291 5 176 2.0E-42 T 13-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 P40_20520 09ea7f6c466f908cc107032ea321125d 291 Gene3D G3DSA:3.10.129.10 11 141 3.1E-9 T 13-10-2018 P40_20520 09ea7f6c466f908cc107032ea321125d 291 SUPERFAMILY SSF54637 12 140 1.28E-10 T 13-10-2018 IPR029069 HotDog domain superfamily P40_20520 09ea7f6c466f908cc107032ea321125d 291 SUPERFAMILY SSF54637 163 285 1.92E-15 T 13-10-2018 IPR029069 HotDog domain superfamily P40_20520 09ea7f6c466f908cc107032ea321125d 291 Gene3D G3DSA:3.10.129.10 167 287 5.6E-14 T 13-10-2018 P40_00170 c165046257f530ceb616a2800dc093a2 563 SUPERFAMILY SSF56235 29 557 9.65E-171 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P40_00170 c165046257f530ceb616a2800dc093a2 563 Pfam PF01019 Gamma-glutamyltranspeptidase 46 553 7.0E-167 T 13-10-2018 P40_00170 c165046257f530ceb616a2800dc093a2 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 435 450 1.7E-72 T 13-10-2018 P40_00170 c165046257f530ceb616a2800dc093a2 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 394 412 1.7E-72 T 13-10-2018 P40_00170 c165046257f530ceb616a2800dc093a2 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 53 78 1.7E-72 T 13-10-2018 P40_00170 c165046257f530ceb616a2800dc093a2 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 458 475 1.7E-72 T 13-10-2018 P40_00170 c165046257f530ceb616a2800dc093a2 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 145 164 1.7E-72 T 13-10-2018 P40_00170 c165046257f530ceb616a2800dc093a2 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 273 292 1.7E-72 T 13-10-2018 P40_00170 c165046257f530ceb616a2800dc093a2 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 127 145 1.7E-72 T 13-10-2018 P40_00170 c165046257f530ceb616a2800dc093a2 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 370 388 1.7E-72 T 13-10-2018 P40_00170 c165046257f530ceb616a2800dc093a2 563 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 243 259 1.7E-72 T 13-10-2018 P40_00170 c165046257f530ceb616a2800dc093a2 563 Gene3D G3DSA:3.60.20.40 375 557 6.3E-59 T 13-10-2018 P40_00170 c165046257f530ceb616a2800dc093a2 563 Gene3D G3DSA:1.10.246.130 259 374 8.0E-36 T 13-10-2018 P40_00170 c165046257f530ceb616a2800dc093a2 563 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 33 551 2.7E-145 T 13-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 P40_08455 e95e51887ccbdf76d3475adb5ecc2253 325 Pfam PF13437 HlyD family secretion protein 206 279 4.0E-5 T 13-10-2018 P40_08455 e95e51887ccbdf76d3475adb5ecc2253 325 Pfam PF13533 Biotin-lipoyl like 45 87 2.4E-11 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain P40_09905 7889c95cdadb73e00c09ee541f05ef32 331 SUPERFAMILY SSF53474 65 310 5.18E-54 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_09905 7889c95cdadb73e00c09ee541f05ef32 331 Gene3D G3DSA:3.40.50.1820 16 318 7.6E-73 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_09905 7889c95cdadb73e00c09ee541f05ef32 331 Pfam PF07859 alpha/beta hydrolase fold 79 285 7.2E-55 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 P40_00300 939e4443aaba486e097dc4419bc1c9f2 161 Gene3D G3DSA:3.10.50.40 3 155 1.6E-52 T 13-10-2018 P40_00300 939e4443aaba486e097dc4419bc1c9f2 161 Gene3D G3DSA:2.40.10.330 72 122 1.6E-52 T 13-10-2018 P40_00300 939e4443aaba486e097dc4419bc1c9f2 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 74 2.7E-8 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain P40_00300 939e4443aaba486e097dc4419bc1c9f2 161 SUPERFAMILY SSF54534 3 141 3.14E-29 T 13-10-2018 P40_20470 39f94eb1ef41a3883438daa0100907d7 192 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 156 2.2E-24 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_13890 14e3548909a47bc34adadf9f7c5ca4af 781 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 617 763 2.5E-11 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_20930 55d3eba2b623641590ec8db35797b827 436 Pfam PF02447 GntP family permease 7 307 2.3E-10 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 P40_11770 bc7598ff34f6b4d9de81269a1f49c38d 523 Gene3D G3DSA:3.50.50.60 423 522 1.3E-21 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_11770 bc7598ff34f6b4d9de81269a1f49c38d 523 Gene3D G3DSA:3.50.50.60 2 150 4.7E-28 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_11770 bc7598ff34f6b4d9de81269a1f49c38d 523 Pfam PF05199 GMC oxidoreductase 411 517 2.7E-17 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 P40_11770 bc7598ff34f6b4d9de81269a1f49c38d 523 Pfam PF00732 GMC oxidoreductase 5 279 2.0E-12 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 P40_11770 bc7598ff34f6b4d9de81269a1f49c38d 523 SUPERFAMILY SSF51905 7 521 1.3E-47 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_11770 bc7598ff34f6b4d9de81269a1f49c38d 523 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 194 205 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P40_11770 bc7598ff34f6b4d9de81269a1f49c38d 523 Gene3D G3DSA:3.50.50.60 185 319 1.2E-28 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P40_14070 74c9530c5ecae0942882028acee97247 177 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 159 3.3E-21 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_12720 ef77e05befaea97e7a4e121ff4dda966 176 Pfam PF03695 Uncharacterised protein family (UPF0149) 20 172 1.7E-15 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 P40_12720 ef77e05befaea97e7a4e121ff4dda966 176 SUPERFAMILY SSF101327 14 148 2.22E-14 T 13-10-2018 IPR036255 YgfB-like superfamily P40_20480 4769d4746634cec291ff9299f76864f5 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.9E-123 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_20480 4769d4746634cec291ff9299f76864f5 393 PIRSF PIRSF000429 1 393 1.3E-120 T 13-10-2018 IPR002155 Thiolase GO:0016747 P40_20480 4769d4746634cec291ff9299f76864f5 393 SUPERFAMILY SSF53901 271 392 8.64E-41 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_20480 4769d4746634cec291ff9299f76864f5 393 Gene3D G3DSA:3.40.47.10 127 389 1.9E-133 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_20480 4769d4746634cec291ff9299f76864f5 393 Pfam PF02803 Thiolase, C-terminal domain 271 392 5.6E-43 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 P40_20480 4769d4746634cec291ff9299f76864f5 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 P40_20480 4769d4746634cec291ff9299f76864f5 393 SUPERFAMILY SSF53901 3 270 1.47E-64 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_20480 4769d4746634cec291ff9299f76864f5 393 Pfam PF00108 Thiolase, N-terminal domain 5 262 3.0E-63 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 P40_20480 4769d4746634cec291ff9299f76864f5 393 Gene3D G3DSA:3.40.47.10 6 276 1.9E-133 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 P40_17150 d5421460c5d0a2f9ed95dffba8a95d1d 145 Pfam PF05232 Chlorhexidine efflux transporter 4 67 2.2E-24 T 13-10-2018 IPR007896 Chlorhexidine efflux transporter P40_17150 d5421460c5d0a2f9ed95dffba8a95d1d 145 Pfam PF05232 Chlorhexidine efflux transporter 74 136 9.2E-24 T 13-10-2018 IPR007896 Chlorhexidine efflux transporter P40_19850 cd0201b53a3e3c4a1c6239cfeb44d31d 246 Gene3D G3DSA:1.20.120.1630 8 166 3.3E-26 T 13-10-2018 P40_19850 cd0201b53a3e3c4a1c6239cfeb44d31d 246 Pfam PF04191 Phospholipid methyltransferase 52 151 1.5E-11 T 13-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 P40_00490 832f2351b5ddb387adb5d05795113415 385 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 323 3.0E-20 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_00490 832f2351b5ddb387adb5d05795113415 385 Gene3D G3DSA:3.40.190.170 26 352 2.8E-59 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_02640 0fd8ae0cc6411f415ce36e0ea0939230 149 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 26 135 2.3E-32 T 13-10-2018 IPR019223 Domain of unknown function DUF2147 P40_02640 0fd8ae0cc6411f415ce36e0ea0939230 149 Gene3D G3DSA:2.40.128.520 22 148 3.2E-33 T 13-10-2018 P40_20675 b75f14a4aeb78704664164334faaead3 190 SUPERFAMILY SSF81342 8 182 4.47E-38 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 P40_20675 b75f14a4aeb78704664164334faaead3 190 Pfam PF01292 Prokaryotic cytochrome b561 9 180 6.1E-32 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 P40_21650 9da203804adb2bf10e48a42bb0eb680e 220 Pfam PF01863 Protein of unknown function DUF45 11 216 1.1E-53 T 13-10-2018 IPR002725 Protein of unknown function DUF45 P40_21650 9da203804adb2bf10e48a42bb0eb680e 220 Gene3D G3DSA:3.30.2010.10 137 218 3.8E-15 T 13-10-2018 P40_13470 d3db25bfb774c09aaf8710da1e0c98e7 378 SUPERFAMILY SSF56935 44 378 1.01E-45 T 13-10-2018 P40_13470 d3db25bfb774c09aaf8710da1e0c98e7 378 Pfam PF13609 Gram-negative porin 18 344 1.3E-37 T 13-10-2018 P40_13470 d3db25bfb774c09aaf8710da1e0c98e7 378 Gene3D G3DSA:2.40.160.10 43 378 8.1E-52 T 13-10-2018 IPR023614 Porin domain superfamily P40_01835 b3ab87d6ebad1388aa1713e315a2ae7f 665 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 36 641 3.7E-178 T 13-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ P40_01835 b3ab87d6ebad1388aa1713e315a2ae7f 665 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 131 566 6.4E-104 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_07330 0502e4e791ff18e20b5fe9f8af4e2bde 104 Pfam PF00893 Small Multidrug Resistance protein 1 92 4.3E-29 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 P40_07330 0502e4e791ff18e20b5fe9f8af4e2bde 104 Gene3D G3DSA:1.10.3730.20 1 104 9.5E-33 T 13-10-2018 P40_07330 0502e4e791ff18e20b5fe9f8af4e2bde 104 SUPERFAMILY SSF103481 4 102 6.8E-20 T 13-10-2018 P40_10925 071acd5369cf44a1be28c946fa5e2f46 91 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 7 90 3.8E-35 T 13-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 P40_06410 2a3d50449b49fd558a940a65fb4542c0 306 SUPERFAMILY SSF81345 3 267 1.7E-37 T 13-10-2018 IPR037294 ABC transporter, BtuC-like P40_06410 2a3d50449b49fd558a940a65fb4542c0 306 Pfam PF00950 ABC 3 transport family 12 266 9.5E-74 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 P40_14695 ed0572390574171139efbd76e3799e6c 421 SMART SM00530 78 134 2.3E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_14695 ed0572390574171139efbd76e3799e6c 421 Gene3D G3DSA:1.10.260.40 72 167 9.6E-11 T 13-10-2018 P40_14695 ed0572390574171139efbd76e3799e6c 421 SUPERFAMILY SSF47413 74 138 2.31E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_14695 ed0572390574171139efbd76e3799e6c 421 Pfam PF06114 IrrE N-terminal-like domain 272 359 3.8E-6 T 13-10-2018 IPR010359 IrrE N-terminal-like domain P40_14695 ed0572390574171139efbd76e3799e6c 421 Pfam PF01381 Helix-turn-helix 80 133 1.4E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_15285 7a47b7f5e1105abe86fe967830fe92fc 110 Gene3D G3DSA:3.40.30.10 7 103 1.4E-32 T 13-10-2018 P40_15285 7a47b7f5e1105abe86fe967830fe92fc 110 PIRSF PIRSF005894 1 108 7.1E-49 T 13-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 P40_15285 7a47b7f5e1105abe86fe967830fe92fc 110 SUPERFAMILY SSF52833 2 103 1.62E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_15285 7a47b7f5e1105abe86fe967830fe92fc 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 5.5E-46 T 13-10-2018 IPR004480 Monothiol glutaredoxin-related P40_15285 7a47b7f5e1105abe86fe967830fe92fc 110 Pfam PF00462 Glutaredoxin 17 81 1.0E-17 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 P40_17955 946c0353a71ceb0ff9481451d5b45b9d 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 204 216 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site P40_17955 946c0353a71ceb0ff9481451d5b45b9d 323 Pfam PF00348 Polyprenyl synthetase 31 262 4.4E-73 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 P40_17955 946c0353a71ceb0ff9481451d5b45b9d 323 Gene3D G3DSA:1.10.600.10 1 323 6.2E-111 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily P40_17955 946c0353a71ceb0ff9481451d5b45b9d 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site P40_17955 946c0353a71ceb0ff9481451d5b45b9d 323 SUPERFAMILY SSF48576 5 322 1.76E-96 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily P40_03305 0396664acc39c0289ffe6cc7c8ce593d 456 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 449 6.8E-83 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 P40_03305 0396664acc39c0289ffe6cc7c8ce593d 456 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 442 3.7E-82 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_21115 65a9ca935e8d400eaa01d0b573041216 261 Gene3D G3DSA:1.10.3470.10 36 260 2.7E-10 T 13-10-2018 IPR037294 ABC transporter, BtuC-like P40_21115 65a9ca935e8d400eaa01d0b573041216 261 SUPERFAMILY SSF81345 2 258 1.83E-41 T 13-10-2018 IPR037294 ABC transporter, BtuC-like P40_21115 65a9ca935e8d400eaa01d0b573041216 261 Pfam PF00950 ABC 3 transport family 1 256 3.3E-71 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 P40_13380 cc48851c0d404c7ca42128f98c1b7e97 362 PRINTS PR00164 ABC-2 type transport system membrane protein signature 284 303 5.3E-7 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 P40_13380 cc48851c0d404c7ca42128f98c1b7e97 362 PRINTS PR00164 ABC-2 type transport system membrane protein signature 247 271 5.3E-7 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 P40_13380 cc48851c0d404c7ca42128f98c1b7e97 362 PRINTS PR00164 ABC-2 type transport system membrane protein signature 304 323 5.3E-7 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 P40_13380 cc48851c0d404c7ca42128f98c1b7e97 362 Pfam PF12698 ABC-2 family transporter protein 30 354 4.5E-49 T 13-10-2018 P40_19970 65ea127019dd8d836f01342090cd7c07 184 Pfam PF06821 Serine hydrolase 12 168 2.3E-43 T 13-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 P40_19970 65ea127019dd8d836f01342090cd7c07 184 Gene3D G3DSA:3.40.50.1820 3 177 1.9E-45 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_19970 65ea127019dd8d836f01342090cd7c07 184 SUPERFAMILY SSF53474 12 168 8.2E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_17415 7961064b499392e362e6f8065b193f84 263 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 60 242 6.3E-58 T 13-10-2018 IPR022293 Integrating conjugative element protein, PFL4693 P40_01710 f74f1546c4a6da384344b80eaa0f011c 128 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 2 126 1.1E-24 T 13-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE P40_05790 848fde0639cbac58dc844ce25f1d372a 404 Gene3D G3DSA:2.40.50.100 179 212 1.0E-10 T 13-10-2018 P40_05790 848fde0639cbac58dc844ce25f1d372a 404 Gene3D G3DSA:2.40.50.100 217 249 1.1E-33 T 13-10-2018 P40_05790 848fde0639cbac58dc844ce25f1d372a 404 Gene3D G3DSA:2.40.420.20 153 164 1.0E-10 T 13-10-2018 P40_05790 848fde0639cbac58dc844ce25f1d372a 404 Gene3D G3DSA:2.40.420.20 326 384 1.1E-33 T 13-10-2018 P40_05790 848fde0639cbac58dc844ce25f1d372a 404 Gene3D G3DSA:2.40.30.170 165 178 1.0E-10 T 13-10-2018 P40_05790 848fde0639cbac58dc844ce25f1d372a 404 Gene3D G3DSA:2.40.30.170 250 325 1.1E-33 T 13-10-2018 P40_05790 848fde0639cbac58dc844ce25f1d372a 404 Pfam PF13533 Biotin-lipoyl like 181 215 1.1E-6 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain P40_05790 848fde0639cbac58dc844ce25f1d372a 404 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 217 319 3.1E-15 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain P40_05790 848fde0639cbac58dc844ce25f1d372a 404 SUPERFAMILY SSF51230 174 242 4.71E-10 T 13-10-2018 IPR011053 Single hybrid motif P40_12490 4febb00c557f56bc5a5ad0f25dc415e2 318 Pfam PF14261 Domain of unknown function (DUF4351) 262 311 8.7E-9 T 13-10-2018 IPR025587 Domain of unknown function DUF4351 P40_12490 4febb00c557f56bc5a5ad0f25dc415e2 318 Pfam PF04754 Putative transposase, YhgA-like 2 203 6.0E-33 T 13-10-2018 IPR006842 Transposase (putative), YhgA-like P40_08205 91647de8944194603924fd19cf8185e5 431 Pfam PF04932 O-Antigen ligase 200 351 2.9E-19 T 13-10-2018 IPR007016 O-antigen ligase-related P40_10075 dd0cef8bc40c04aeb3f2661a2b8c014e 577 SUPERFAMILY SSF52540 3 335 2.52E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10075 dd0cef8bc40c04aeb3f2661a2b8c014e 577 Gene3D G3DSA:3.40.50.300 2 328 6.8E-15 T 13-10-2018 P40_10075 dd0cef8bc40c04aeb3f2661a2b8c014e 577 Pfam PF13175 AAA ATPase domain 3 55 6.6E-9 T 13-10-2018 P40_10075 dd0cef8bc40c04aeb3f2661a2b8c014e 577 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 253 322 9.4E-7 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P40_17745 c4e0772018ded5d985d53de76ff749c9 758 Gene3D G3DSA:3.60.21.10 42 275 1.5E-12 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like P40_17745 c4e0772018ded5d985d53de76ff749c9 758 SUPERFAMILY SSF56300 39 296 3.8E-25 T 13-10-2018 P40_12120 4a8e40a81ab5b6718a128b7707c0bd63 135 SMART SM00530 79 132 0.0037 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P40_12120 4a8e40a81ab5b6718a128b7707c0bd63 135 SUPERFAMILY SSF47413 78 132 2.44E-5 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_06290 6089685c7bedd60b988223928a06998e 520 Gene3D G3DSA:1.20.1250.20 269 500 2.2E-13 T 13-10-2018 P40_06290 6089685c7bedd60b988223928a06998e 520 Pfam PF07690 Major Facilitator Superfamily 26 413 1.1E-46 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_06290 6089685c7bedd60b988223928a06998e 520 SUPERFAMILY SSF103473 8 504 5.1E-63 T 13-10-2018 IPR036259 MFS transporter superfamily P40_06290 6089685c7bedd60b988223928a06998e 520 Gene3D G3DSA:1.20.1720.10 19 250 1.9E-42 T 13-10-2018 P40_20310 b7845f9f7485c8dd8adb69e2d4037f6d 196 Pfam PF01323 DSBA-like thioredoxin domain 4 193 1.5E-44 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 P40_20310 b7845f9f7485c8dd8adb69e2d4037f6d 196 SUPERFAMILY SSF52833 1 194 1.34E-47 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_20310 b7845f9f7485c8dd8adb69e2d4037f6d 196 Gene3D G3DSA:3.40.30.10 4 196 6.6E-67 T 13-10-2018 P40_20310 b7845f9f7485c8dd8adb69e2d4037f6d 196 PIRSF PIRSF006386 1 196 6.0E-64 T 13-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 P40_03975 a38cd3ce27d21469428d1e44313b20b0 291 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 275 2.2E-39 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_20795 dfad131c7136fb720e75488e0c7fcb75 676 Pfam PF00593 TonB dependent receptor 235 675 3.0E-43 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_20795 dfad131c7136fb720e75488e0c7fcb75 676 SUPERFAMILY SSF56935 22 675 5.13E-100 T 13-10-2018 P40_20795 dfad131c7136fb720e75488e0c7fcb75 676 Gene3D G3DSA:2.40.170.20 177 675 4.1E-70 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_20795 dfad131c7136fb720e75488e0c7fcb75 676 Gene3D G3DSA:2.170.130.10 25 153 5.9E-22 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_20795 dfad131c7136fb720e75488e0c7fcb75 676 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 150 3.2E-17 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_16205 15d5fc99cba732abe6af1fd771d5e989 133 Pfam PF06476 Protein of unknown function (DUF1090) 15 119 1.5E-30 T 13-10-2018 IPR009468 Protein of unknown function DUF1090 P40_08430 960014ce06d5d5521e6696d8ae7808fd 284 Pfam PF03547 Membrane transport protein 139 278 3.1E-14 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 P40_08430 960014ce06d5d5521e6696d8ae7808fd 284 Pfam PF03547 Membrane transport protein 1 131 8.0E-8 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 P40_19055 6e29f072c727957ffb21aa967a7c4f6c 166 Pfam PF04115 Ureidoglycolate lyase 4 157 3.9E-45 T 13-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 P40_19055 6e29f072c727957ffb21aa967a7c4f6c 166 PIRSF PIRSF017306 4 161 5.1E-39 T 13-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 P40_19055 6e29f072c727957ffb21aa967a7c4f6c 166 SUPERFAMILY SSF51182 6 156 3.85E-54 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily P40_19055 6e29f072c727957ffb21aa967a7c4f6c 166 Gene3D G3DSA:2.60.120.480 4 164 4.9E-51 T 13-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 P40_00845 8b9d78d43fc44310f589f39a9fe6ce74 379 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 314 2.0E-26 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_00845 8b9d78d43fc44310f589f39a9fe6ce74 379 Gene3D G3DSA:3.40.190.170 24 348 3.5E-65 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_06275 c16ca0909fd517391405016a6a6e33f4 215 PIRSF PIRSF020606 1 208 8.6E-67 T 13-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 P40_06275 c16ca0909fd517391405016a6a6e33f4 215 Pfam PF09997 Predicted membrane protein (DUF2238) 39 187 1.2E-51 T 13-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 P40_19015 c568bffb71aab33d3c4ddd1b1b5b9971 335 Gene3D G3DSA:3.40.190.10 119 213 1.3E-56 T 13-10-2018 P40_19015 c568bffb71aab33d3c4ddd1b1b5b9971 335 SUPERFAMILY SSF53850 36 260 3.26E-26 T 13-10-2018 P40_19015 c568bffb71aab33d3c4ddd1b1b5b9971 335 Pfam PF09084 NMT1/THI5 like 48 252 2.0E-30 T 13-10-2018 IPR015168 SsuA/THI5-like P40_19015 c568bffb71aab33d3c4ddd1b1b5b9971 335 Gene3D G3DSA:3.40.190.10 43 327 1.3E-56 T 13-10-2018 P40_06620 64cdaf1f0b5b848fe08955414da9cf7b 378 SUPERFAMILY SSF56935 71 378 1.95E-9 T 13-10-2018 P40_14150 8fa512cd3a73d1afab93a422e227e29f 108 SUPERFAMILY SSF75169 1 106 6.33E-14 T 13-10-2018 IPR027396 DsrEFH-like P40_14150 8fa512cd3a73d1afab93a422e227e29f 108 Gene3D G3DSA:3.40.1260.10 2 107 1.2E-8 T 13-10-2018 IPR027396 DsrEFH-like P40_14150 8fa512cd3a73d1afab93a422e227e29f 108 Pfam PF02635 DsrE/DsrF-like family 4 106 2.0E-9 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein P40_21575 04024fcb24e340b6f64459c79ec35020 126 Pfam PF03899 ATP synthase I chain 3 81 3.1E-7 T 13-10-2018 IPR005598 ATP synthase protein I P40_08525 18b847a9a171c742afb353eb538cbee4 391 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 174 327 7.0E-21 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_08525 18b847a9a171c742afb353eb538cbee4 391 Gene3D G3DSA:3.40.190.170 36 348 5.9E-63 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_19490 eb41593a6188b405380f032790854701 131 Gene3D G3DSA:3.40.50.1010 1 130 2.2E-37 T 13-10-2018 P40_19490 eb41593a6188b405380f032790854701 131 SUPERFAMILY SSF88723 2 131 4.49E-35 T 13-10-2018 IPR029060 PIN-like domain superfamily P40_19490 eb41593a6188b405380f032790854701 131 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 129 11.482 T 13-10-2018 IPR022907 VapC family GO:0004540 P40_19490 eb41593a6188b405380f032790854701 131 Pfam PF01850 PIN domain 4 123 1.3E-14 T 13-10-2018 IPR002716 PIN domain P40_19750 affa6ce31c2d9608d0dae7ffc5243844 829 Gene3D G3DSA:2.40.170.20 240 828 1.1E-51 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily P40_19750 affa6ce31c2d9608d0dae7ffc5243844 829 SUPERFAMILY SSF56935 40 827 5.63E-97 T 13-10-2018 P40_19750 affa6ce31c2d9608d0dae7ffc5243844 829 Pfam PF00593 TonB dependent receptor 387 827 5.1E-39 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel P40_19750 affa6ce31c2d9608d0dae7ffc5243844 829 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 162 1.7E-15 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain P40_19750 affa6ce31c2d9608d0dae7ffc5243844 829 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 38 827 4.6E-182 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor P40_19750 affa6ce31c2d9608d0dae7ffc5243844 829 Gene3D G3DSA:2.170.130.10 41 165 1.6E-14 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily P40_19595 b2891402484df1e5fba1693859c0f916 217 Pfam PF04367 Protein of unknown function (DUF502) 68 166 1.9E-11 T 13-10-2018 IPR007462 Protein of unknown function DUF502 P40_18540 78ce833a6423de2bf91ce894a01f481c 227 Pfam PF01712 Deoxynucleoside kinase 19 209 2.0E-37 T 13-10-2018 IPR031314 Deoxynucleoside kinase domain P40_18540 78ce833a6423de2bf91ce894a01f481c 227 SUPERFAMILY SSF52540 17 220 6.39E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_18540 78ce833a6423de2bf91ce894a01f481c 227 PIRSF PIRSF000705 3 218 5.3E-55 T 13-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 P40_18540 78ce833a6423de2bf91ce894a01f481c 227 Gene3D G3DSA:3.40.50.300 18 211 8.5E-45 T 13-10-2018 P40_05155 e0b92c98805962a4e855acc3144c5fec 485 Pfam PF00939 Sodium:sulfate symporter transmembrane region 20 477 1.4E-82 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 P40_05155 e0b92c98805962a4e855acc3144c5fec 485 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 39 479 7.4E-97 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 P40_05155 e0b92c98805962a4e855acc3144c5fec 485 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 431 447 - T 13-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 P40_14990 b836f3b0f5e27d37b2b4322dc2e62d00 181 Gene3D G3DSA:1.10.3210.10 12 139 3.1E-5 T 13-10-2018 P40_14990 b836f3b0f5e27d37b2b4322dc2e62d00 181 SUPERFAMILY SSF109604 8 172 9.74E-11 T 13-10-2018 P40_17260 bfff553975dd9d91f945a6f6c0b395a2 158 Pfam PF06271 RDD family 7 143 3.6E-22 T 13-10-2018 IPR010432 RDD P40_03565 8b05b36d82b9017558c21da5f9d51c65 748 Pfam PF05170 AsmA family 1 567 2.4E-46 T 13-10-2018 IPR007844 AsmA P40_06015 a3464433735bb6239542ae0a20297b21 407 SUPERFAMILY SSF103473 18 401 3.92E-46 T 13-10-2018 IPR036259 MFS transporter superfamily P40_06015 a3464433735bb6239542ae0a20297b21 407 Pfam PF07690 Major Facilitator Superfamily 27 283 1.4E-23 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_06015 a3464433735bb6239542ae0a20297b21 407 Gene3D G3DSA:1.20.1250.20 16 398 2.6E-37 T 13-10-2018 P40_12615 f2ae9e096b44871e3eeeaa77ccf1d6ac 263 Gene3D G3DSA:3.90.226.10 4 204 1.9E-62 T 13-10-2018 P40_12615 f2ae9e096b44871e3eeeaa77ccf1d6ac 263 SUPERFAMILY SSF52096 5 263 8.5E-76 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_12615 f2ae9e096b44871e3eeeaa77ccf1d6ac 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 262 3.5E-53 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_12615 f2ae9e096b44871e3eeeaa77ccf1d6ac 263 Gene3D G3DSA:1.10.12.10 205 263 3.0E-12 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal P40_11080 1fffd718174edc925005dcbd839bbae5 334 Pfam PF00487 Fatty acid desaturase 69 312 4.4E-37 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 P40_09870 463f8d3f47f4ef5adcefcbbc6c335e35 139 SUPERFAMILY SSF54637 5 138 7.96E-31 T 13-10-2018 IPR029069 HotDog domain superfamily P40_09870 463f8d3f47f4ef5adcefcbbc6c335e35 139 Gene3D G3DSA:3.10.129.10 8 138 3.1E-34 T 13-10-2018 P40_09870 463f8d3f47f4ef5adcefcbbc6c335e35 139 Pfam PF01575 MaoC like domain 22 108 2.5E-20 T 13-10-2018 IPR002539 MaoC-like dehydratase domain P40_13850 d49806375b86275be2e95c6568a62653 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 186 4.4E-30 T 13-10-2018 P40_13850 d49806375b86275be2e95c6568a62653 226 Gene3D G3DSA:3.40.50.1000 7 194 3.3E-53 T 13-10-2018 IPR023214 HAD superfamily P40_13850 d49806375b86275be2e95c6568a62653 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 208 2.8E-49 T 13-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 P40_13850 d49806375b86275be2e95c6568a62653 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 181 1.7E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_13850 d49806375b86275be2e95c6568a62653 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 86 184 6.4E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P40_13850 d49806375b86275be2e95c6568a62653 226 SUPERFAMILY SSF56784 5 217 6.24E-55 T 13-10-2018 IPR036412 HAD-like superfamily P40_13850 d49806375b86275be2e95c6568a62653 226 Gene3D G3DSA:1.10.150.240 19 86 3.3E-53 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 P40_07065 a7fe28fae84ffcdc0c99aead8b760f68 334 SUPERFAMILY SSF51412 8 332 1.53E-46 T 13-10-2018 P40_07065 a7fe28fae84ffcdc0c99aead8b760f68 334 Pfam PF03060 Nitronate monooxygenase 7 327 9.4E-67 T 13-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 P40_07065 a7fe28fae84ffcdc0c99aead8b760f68 334 Gene3D G3DSA:3.20.20.70 2 334 1.2E-88 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_15710 8ce4a93d1f928f9f7e5e078531862fa3 323 PIRSF PIRSF018005 6 323 3.6E-108 T 13-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 P40_15710 8ce4a93d1f928f9f7e5e078531862fa3 323 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 23 321 1.2E-101 T 13-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent P40_15710 8ce4a93d1f928f9f7e5e078531862fa3 323 Gene3D G3DSA:3.40.50.150 49 224 4.3E-46 T 13-10-2018 P40_15710 8ce4a93d1f928f9f7e5e078531862fa3 323 SUPERFAMILY SSF53335 38 307 3.8E-7 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_15710 8ce4a93d1f928f9f7e5e078531862fa3 323 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 22 319 2.8E-113 T 13-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 P40_16110 1deec779dabfa5c5a5e414ec3379c35c 378 Hamap MF_00416 Flagellar P-ring protein [flgI]. 16 378 36.874 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 P40_16110 1deec779dabfa5c5a5e414ec3379c35c 378 PRINTS PR01010 Flagellar P-ring protein signature 35 50 1.3E-73 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 P40_16110 1deec779dabfa5c5a5e414ec3379c35c 378 PRINTS PR01010 Flagellar P-ring protein signature 50 65 1.3E-73 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 P40_16110 1deec779dabfa5c5a5e414ec3379c35c 378 PRINTS PR01010 Flagellar P-ring protein signature 266 278 1.3E-73 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 P40_16110 1deec779dabfa5c5a5e414ec3379c35c 378 PRINTS PR01010 Flagellar P-ring protein signature 175 193 1.3E-73 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 P40_16110 1deec779dabfa5c5a5e414ec3379c35c 378 PRINTS PR01010 Flagellar P-ring protein signature 135 153 1.3E-73 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 P40_16110 1deec779dabfa5c5a5e414ec3379c35c 378 PRINTS PR01010 Flagellar P-ring protein signature 96 115 1.3E-73 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 P40_16110 1deec779dabfa5c5a5e414ec3379c35c 378 PRINTS PR01010 Flagellar P-ring protein signature 70 85 1.3E-73 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 P40_16110 1deec779dabfa5c5a5e414ec3379c35c 378 PRINTS PR01010 Flagellar P-ring protein signature 118 135 1.3E-73 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 P40_16110 1deec779dabfa5c5a5e414ec3379c35c 378 Pfam PF02119 Flagellar P-ring protein 36 377 2.0E-133 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 P40_21465 0a475ca8b2773fcc7610f6db48b0ae7a 444 Pfam PF03553 Na+/H+ antiporter family 238 428 3.0E-9 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 P40_21465 0a475ca8b2773fcc7610f6db48b0ae7a 444 Pfam PF03553 Na+/H+ antiporter family 46 217 3.3E-13 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 P40_01420 aa76f8e07136ff1476864dcc653dcb8f 214 Gene3D G3DSA:3.30.40.60 111 207 1.3E-16 T 13-10-2018 P40_01420 aa76f8e07136ff1476864dcc653dcb8f 214 SMART SM00507 119 170 5.3E-4 T 13-10-2018 IPR003615 HNH nuclease P40_01420 aa76f8e07136ff1476864dcc653dcb8f 214 Pfam PF14279 HNH endonuclease 130 183 4.3E-9 T 13-10-2018 IPR029471 HNH endonuclease 5 P40_01860 e90d86b22d9e0c1d89804f559cb65bd4 155 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 13 139 2.6E-15 T 13-10-2018 IPR009936 Protein of unknown function DUF1468 P40_15725 e2cd9dd9ac8e5c214a6df4b0366526eb 204 Pfam PF01810 LysE type translocator 9 197 5.9E-20 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 P40_09605 02c78c3bf676cb8a062012f40bf6fb79 503 Gene3D G3DSA:1.20.1720.10 26 257 1.7E-39 T 13-10-2018 P40_09605 02c78c3bf676cb8a062012f40bf6fb79 503 Pfam PF07690 Major Facilitator Superfamily 33 420 8.8E-47 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_09605 02c78c3bf676cb8a062012f40bf6fb79 503 SUPERFAMILY SSF103473 13 430 1.44E-57 T 13-10-2018 IPR036259 MFS transporter superfamily P40_09605 02c78c3bf676cb8a062012f40bf6fb79 503 Gene3D G3DSA:1.20.1250.20 277 500 1.3E-9 T 13-10-2018 P40_09640 bd2938e925372e7e2d69576b0c129b9a 450 Gene3D G3DSA:1.10.4100.10 25 417 1.1E-101 T 13-10-2018 P40_09640 bd2938e925372e7e2d69576b0c129b9a 450 SUPERFAMILY SSF103378 3 447 8.76E-119 T 13-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 P40_09640 bd2938e925372e7e2d69576b0c129b9a 450 Gene3D G3DSA:3.30.1330.120 268 400 1.1E-101 T 13-10-2018 P40_09640 bd2938e925372e7e2d69576b0c129b9a 450 Pfam PF03972 MmgE/PrpD family 5 440 1.6E-133 T 13-10-2018 IPR005656 MmgE/PrpD GO:0016829 P40_12430 2ad2affe9a789a36913d9ca99cef3f25 273 Pfam PF02754 Cysteine-rich domain 161 245 2.3E-10 T 13-10-2018 IPR004017 Cysteine-rich domain P40_12430 2ad2affe9a789a36913d9ca99cef3f25 273 Pfam PF02754 Cysteine-rich domain 34 113 1.1E-11 T 13-10-2018 IPR004017 Cysteine-rich domain P40_02670 0a6bb8e2fbe6f80879715883c3860967 180 Pfam PF03691 Uncharacterised protein family (UPF0167) 54 173 2.5E-6 T 13-10-2018 IPR005363 Uncharacterised protein family UPF0167 P40_15395 82a6ef4d83612536700c83e6b9325666 163 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 25 155 1.9E-21 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_03845 8d2ac86a426474444caa3b93bb9f7e9f 314 Pfam PF01548 Transposase 10 149 7.6E-22 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_03845 8d2ac86a426474444caa3b93bb9f7e9f 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 193 274 1.3E-19 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_16675 65fef691dc2ff2dc3f7ccbd45d7e2877 325 Pfam PF13280 WYL domain 147 316 1.2E-37 T 13-10-2018 IPR026881 WYL domain P40_16675 65fef691dc2ff2dc3f7ccbd45d7e2877 325 SUPERFAMILY SSF46785 3 56 1.04E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P40_16675 65fef691dc2ff2dc3f7ccbd45d7e2877 325 Gene3D G3DSA:1.10.10.10 1 64 2.3E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_16675 65fef691dc2ff2dc3f7ccbd45d7e2877 325 Pfam PF08279 HTH domain 9 58 2.0E-6 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 P40_16675 65fef691dc2ff2dc3f7ccbd45d7e2877 325 PIRSF PIRSF016838 75 325 4.1E-24 T 13-10-2018 IPR028349 Protein PafC P40_16675 65fef691dc2ff2dc3f7ccbd45d7e2877 325 PIRSF PIRSF016838 14 46 360.0 T 13-10-2018 IPR028349 Protein PafC P40_00950 5c7df42f426843d82d2a189dfe9095f4 90 Gene3D G3DSA:1.10.1220.10 8 49 1.4E-6 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 P40_00950 5c7df42f426843d82d2a189dfe9095f4 90 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 40 1.9E-9 T 13-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 P40_00950 5c7df42f426843d82d2a189dfe9095f4 90 SUPERFAMILY SSF47598 2 42 1.19E-11 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 P40_16385 c0d754ba7415c8dc16a0a65c2d1e4815 64 Gene3D G3DSA:3.30.50.10 3 63 5.9E-22 T 13-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 P40_16385 c0d754ba7415c8dc16a0a65c2d1e4815 64 Pfam PF03884 DNA gyrase inhibitor YacG 10 54 7.0E-23 T 13-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 P40_16385 c0d754ba7415c8dc16a0a65c2d1e4815 64 SUPERFAMILY SSF57716 6 61 1.01E-18 T 13-10-2018 P40_16385 c0d754ba7415c8dc16a0a65c2d1e4815 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 5 64 17.803 T 13-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 P40_03940 41026560673b2ad1a85d7f4f10142169 149 Pfam PF00583 Acetyltransferase (GNAT) family 31 113 4.2E-16 T 13-10-2018 IPR000182 GNAT domain P40_03940 41026560673b2ad1a85d7f4f10142169 149 SUPERFAMILY SSF55729 15 147 4.56E-31 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_03940 41026560673b2ad1a85d7f4f10142169 149 Gene3D G3DSA:3.40.630.30 6 149 2.3E-42 T 13-10-2018 P40_20860 b780026e6d179893b2a915987f1273ec 204 SUPERFAMILY SSF52833 18 198 7.34E-39 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_20860 b780026e6d179893b2a915987f1273ec 204 Pfam PF01323 DSBA-like thioredoxin domain 89 180 3.2E-13 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 P40_20860 b780026e6d179893b2a915987f1273ec 204 PIRSF PIRSF001488 1 204 2.3E-45 T 13-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL P40_20860 b780026e6d179893b2a915987f1273ec 204 Gene3D G3DSA:3.40.30.10 16 202 1.3E-50 T 13-10-2018 P40_06880 422e01b2fbe7e7183a891f0730f1acb2 769 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 78 768 5.8E-288 T 13-10-2018 IPR010706 Fatty acid cis-trans isomerase P40_01150 e100e3c627e644ea09d471f74e6dbf51 337 PIRSF PIRSF003097 38 332 1.3E-62 T 13-10-2018 IPR004513 Cell division protein FtsX GO:0016021 P40_06885 c30b523e6b6b514d650252a6faed2233 161 Pfam PF07799 Protein of unknown function (DUF1643) 14 143 1.4E-42 T 13-10-2018 IPR012441 Protein of unknown function DUF1643 P40_20740 e94b0d7c1faabec4a1f47325ef6fc1a7 272 SUPERFAMILY SSF50182 106 168 3.6E-16 T 13-10-2018 IPR010920 LSM domain superfamily P40_20740 e94b0d7c1faabec4a1f47325ef6fc1a7 272 Pfam PF00924 Mechanosensitive ion channel 64 264 2.9E-33 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 P40_20740 e94b0d7c1faabec4a1f47325ef6fc1a7 272 SUPERFAMILY SSF82689 179 267 1.7E-5 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 P40_20740 e94b0d7c1faabec4a1f47325ef6fc1a7 272 Gene3D G3DSA:2.30.30.60 122 170 8.7E-10 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily P40_05250 5d7e15b85c049a84c9375a332d1b6604 237 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 27 161 3.4E-14 T 13-10-2018 IPR010239 Conserved hypothetical protein CHP02001 P40_05250 5d7e15b85c049a84c9375a332d1b6604 237 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 8 183 1.1E-19 T 13-10-2018 IPR010239 Conserved hypothetical protein CHP02001 P40_05250 5d7e15b85c049a84c9375a332d1b6604 237 SUPERFAMILY SSF56935 57 195 1.79E-5 T 13-10-2018 P40_03655 9e2339abad96f71333821900d54e282d 65 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 6 60 1.6E-18 T 13-10-2018 IPR019201 Protein of unknown function DUF2065 P40_11085 03a7fa69564adeacdb8efa2f2a2aaa86 257 Pfam PF00149 Calcineurin-like phosphoesterase 7 222 2.2E-13 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 P40_11085 03a7fa69564adeacdb8efa2f2a2aaa86 257 SUPERFAMILY SSF56300 6 246 1.37E-26 T 13-10-2018 P40_00825 551d3c9b0483e6a80b90d139503d76cd 338 SUPERFAMILY SSF53187 19 333 9.26E-57 T 13-10-2018 P40_00825 551d3c9b0483e6a80b90d139503d76cd 338 PIRSF PIRSF039012 3 337 6.6E-82 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 P40_00825 551d3c9b0483e6a80b90d139503d76cd 338 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 331 3.3E-69 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 P40_00825 551d3c9b0483e6a80b90d139503d76cd 338 TIGRFAM TIGR02994 ectoine_eutE: ectoine utilization protein EutE 6 331 6.7E-137 T 13-10-2018 IPR014336 N-alpha-acetyl diaminobutyrate deacetylase DoeB KEGG: 00260+3.5.1.125|MetaCyc: PWY-7855 P40_00825 551d3c9b0483e6a80b90d139503d76cd 338 Gene3D G3DSA:3.40.630.10 4 334 5.9E-112 T 13-10-2018 P40_02235 331d82a38b893912ed1a7ceee8a2c877 488 Gene3D G3DSA:3.40.50.12780 1 384 1.3E-127 T 13-10-2018 P40_02235 331d82a38b893912ed1a7ceee8a2c877 488 ProSitePatterns PS00455 Putative AMP-binding domain signature. 145 156 - T 13-10-2018 IPR020845 AMP-binding, conserved site P40_02235 331d82a38b893912ed1a7ceee8a2c877 488 Pfam PF13193 AMP-binding enzyme C-terminal domain 400 475 7.5E-23 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain P40_02235 331d82a38b893912ed1a7ceee8a2c877 488 Gene3D G3DSA:3.30.300.310 387 488 3.9E-37 T 13-10-2018 P40_02235 331d82a38b893912ed1a7ceee8a2c877 488 Pfam PF00501 AMP-binding enzyme 2 391 2.8E-108 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 P40_02235 331d82a38b893912ed1a7ceee8a2c877 488 SUPERFAMILY SSF56801 2 487 3.01E-164 T 13-10-2018 P40_15990 a6c318073b487b36026d4309ef931485 138 Pfam PF05400 Flagellar protein FliT 29 114 5.1E-20 T 13-10-2018 IPR008622 Flagellar protein FliT P40_15990 a6c318073b487b36026d4309ef931485 138 Gene3D G3DSA:1.20.58.380 11 119 1.1E-28 T 13-10-2018 P40_19415 69ec470657394185ac2b389d8244a313 231 Pfam PF13578 Methyltransferase domain 70 193 2.0E-19 T 13-10-2018 P40_19415 69ec470657394185ac2b389d8244a313 231 SUPERFAMILY SSF53335 47 212 2.11E-15 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_19415 69ec470657394185ac2b389d8244a313 231 Gene3D G3DSA:3.40.50.150 33 217 7.1E-24 T 13-10-2018 P40_05615 7cb120e1bbaf28e93dd889df83fd0e6b 177 Pfam PF06114 IrrE N-terminal-like domain 80 171 6.1E-14 T 13-10-2018 IPR010359 IrrE N-terminal-like domain P40_06480 5ef820d15f3a6b0a2dfa3c5d6977d5a2 127 Pfam PF07681 DoxX 8 87 9.1E-18 T 13-10-2018 IPR032808 DoxX family P40_12425 5a5a7aab3c56dbac42d839654763dd3b 563 Pfam PF02652 L-lactate permease 7 550 1.9E-102 T 13-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 P40_08615 58ff59bae1841949e73322fbce358966 449 Pfam PF07044 Protein of unknown function (DUF1329) 77 445 1.2E-124 T 13-10-2018 IPR010752 Protein of unknown function DUF1329 P40_05815 8115b825f35265510df96bb27800eff5 100 Gene3D G3DSA:3.40.120.10 2 83 7.6E-24 T 13-10-2018 P40_05815 8115b825f35265510df96bb27800eff5 100 SUPERFAMILY SSF53738 2 81 5.1E-22 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_05815 8115b825f35265510df96bb27800eff5 100 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 81 1.1E-22 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 P40_20670 1b647306db9bf1ad46054e12b95e653a 198 SUPERFAMILY SSF101874 29 198 3.01E-58 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily P40_20670 1b647306db9bf1ad46054e12b95e653a 198 SMART SM00867 31 196 8.3E-74 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like P40_20670 1b647306db9bf1ad46054e12b95e653a 198 Gene3D G3DSA:2.40.128.110 30 198 1.2E-56 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily P40_20670 1b647306db9bf1ad46054e12b95e653a 198 Pfam PF04264 YceI-like domain 34 194 1.7E-41 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like P40_17510 398d20460fe9a3094726c02e4d4a13a7 144 Pfam PF07511 Protein of unknown function (DUF1525) 30 141 1.8E-34 T 13-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 P40_17510 398d20460fe9a3094726c02e4d4a13a7 144 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 30 140 3.8E-36 T 13-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 P40_20210 ca47e09f0190f3401c1100edf76b4a5c 331 Pfam PF03060 Nitronate monooxygenase 81 305 3.2E-15 T 13-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 P40_20210 ca47e09f0190f3401c1100edf76b4a5c 331 Gene3D G3DSA:3.20.20.70 9 322 3.4E-60 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P40_20210 ca47e09f0190f3401c1100edf76b4a5c 331 SUPERFAMILY SSF51412 10 307 1.58E-59 T 13-10-2018 P40_09180 e3cb85f0cbdbaa3db5ae9dd0c07ab120 274 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 225 251 - T 13-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 P40_09180 e3cb85f0cbdbaa3db5ae9dd0c07ab120 274 Pfam PF01148 Cytidylyltransferase family 3 264 2.0E-57 T 13-10-2018 P40_06060 18054bd1199f19723a4472487f3fc34d 96 SUPERFAMILY SSF54909 1 87 1.39E-12 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_06060 18054bd1199f19723a4472487f3fc34d 96 Gene3D G3DSA:3.30.70.100 1 86 3.5E-17 T 13-10-2018 P40_14160 a348b9da14f48cceb2db93c71946f04b 126 Gene3D G3DSA:3.40.1260.10 12 126 1.7E-7 T 13-10-2018 IPR027396 DsrEFH-like P40_14160 a348b9da14f48cceb2db93c71946f04b 126 SUPERFAMILY SSF75169 24 126 4.71E-15 T 13-10-2018 IPR027396 DsrEFH-like P40_14160 a348b9da14f48cceb2db93c71946f04b 126 Pfam PF02635 DsrE/DsrF-like family 17 121 1.1E-5 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein P40_05150 fc83a199f8e9f6ead9bcbac68ac79b80 208 Gene3D G3DSA:3.40.50.620 87 175 2.7E-6 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P40_05150 fc83a199f8e9f6ead9bcbac68ac79b80 208 Pfam PF02698 DUF218 domain 41 197 1.4E-23 T 13-10-2018 IPR003848 Domain of unknown function DUF218 P40_15170 618e5941ac1b26da1b2191c77368f502 342 Pfam PF13271 Domain of unknown function (DUF4062) 15 94 3.1E-9 T 13-10-2018 IPR025139 Domain of unknown function DUF4062 P40_21350 747befaa7c872448000c33988e9c0376 140 Gene3D G3DSA:2.60.40.3230 61 140 6.8E-7 T 13-10-2018 IPR038483 YcfL-like superfamily P40_14645 fd90853ecafa031e5070c479f60252ae 190 Pfam PF08747 Domain of unknown function (DUF1788) 68 188 4.3E-35 T 13-10-2018 IPR014858 Protein of unknown function DUF1788 P40_13160 af2cb2ce7d22bd855e9a56f19e96920d 115 Gene3D G3DSA:2.40.10.220 3 115 4.3E-45 T 13-10-2018 P40_13160 af2cb2ce7d22bd855e9a56f19e96920d 115 Pfam PF07238 PilZ domain 14 103 3.1E-13 T 13-10-2018 IPR009875 PilZ domain GO:0035438 P40_16710 4a5ea15790c7ef104ab54a0441b1809b 209 Gene3D G3DSA:3.40.50.1820 5 208 3.5E-52 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_16710 4a5ea15790c7ef104ab54a0441b1809b 209 SUPERFAMILY SSF53474 3 203 8.33E-42 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_06140 4b9aae2b9de87e54d1dc8cbaea4fc19c 210 Pfam PF01810 LysE type translocator 16 206 3.9E-34 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 P40_06140 4b9aae2b9de87e54d1dc8cbaea4fc19c 210 PIRSF PIRSF006324 1 209 3.9E-52 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 P40_01140 5cea87657a84a0b0b65086493c7f957f 123 Pfam PF04241 Protein of unknown function (DUF423) 18 104 3.6E-31 T 13-10-2018 IPR006696 Protein of unknown function DUF423 P40_12470 156e990d77b41b0266f7768260c20566 443 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 295 443 3.2E-8 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) P40_12470 156e990d77b41b0266f7768260c20566 443 SUPERFAMILY SSF56935 55 442 2.99E-10 T 13-10-2018 P40_12470 156e990d77b41b0266f7768260c20566 443 Gene3D G3DSA:2.40.160.60 247 443 1.5E-13 T 13-10-2018 P40_06590 211b5e6cdf4541c0507d52ea88e9e9e6 86 Pfam PF04226 Transglycosylase associated protein 33 84 2.6E-12 T 13-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 P40_05025 4998aa3fe16c096da5341348db5b0ddc 127 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 123 3.2E-20 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 P40_04850 e07221735f2b6e646649ac9d3d3622ca 220 SUPERFAMILY SSF56112 40 171 1.54E-10 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily P40_15590 0a24d2771fe9f59e7db4e6e2d04ad95b 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 193 274 4.3E-19 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_15590 0a24d2771fe9f59e7db4e6e2d04ad95b 314 Pfam PF01548 Transposase 10 149 3.3E-21 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_00460 0a24d2771fe9f59e7db4e6e2d04ad95b 314 Pfam PF02371 Transposase IS116/IS110/IS902 family 193 274 4.3E-19 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 P40_00460 0a24d2771fe9f59e7db4e6e2d04ad95b 314 Pfam PF01548 Transposase 10 149 3.3E-21 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 P40_14715 7a0573bf7755fe2162250b7fc3f044d2 323 Pfam PF06067 Domain of unknown function (DUF932) 77 303 9.2E-76 T 13-10-2018 IPR026325 Protein of unknown function DUF932 P40_14715 7a0573bf7755fe2162250b7fc3f044d2 323 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 319 6.0E-115 T 13-10-2018 IPR017686 Phage/plasmid-like protein P40_21410 038e60a76b450ba170e8c0be9dbce764 263 Pfam PF13622 Thioesterase-like superfamily 22 258 1.2E-29 T 13-10-2018 P40_21410 038e60a76b450ba170e8c0be9dbce764 263 SUPERFAMILY SSF54637 29 105 9.6E-5 T 13-10-2018 IPR029069 HotDog domain superfamily P40_21410 038e60a76b450ba170e8c0be9dbce764 263 SUPERFAMILY SSF54637 120 260 2.14E-9 T 13-10-2018 IPR029069 HotDog domain superfamily P40_21410 038e60a76b450ba170e8c0be9dbce764 263 Gene3D G3DSA:3.10.129.90 12 259 6.7E-16 T 13-10-2018 P40_15365 b452da19363d1d77abc8da5584696073 165 Pfam PF05163 DinB family 5 161 8.5E-34 T 13-10-2018 IPR007837 DNA damage-inducible protein DinB P40_15365 b452da19363d1d77abc8da5584696073 165 Gene3D G3DSA:1.20.120.450 1 162 1.6E-42 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes P40_15365 b452da19363d1d77abc8da5584696073 165 SUPERFAMILY SSF109854 5 144 2.29E-34 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes P40_00555 4675e1f3bd5734dc2a5e4a8d1e65a615 177 Gene3D G3DSA:3.50.70.10 36 158 7.1E-6 T 13-10-2018 IPR016088 Chalcone isomerase, 3-layer sandwich KEGG: 00941+5.5.1.6|MetaCyc: PWY-2002|MetaCyc: PWY-5059|MetaCyc: PWY-6325|MetaCyc: PWY-6787|MetaCyc: PWY-7397|MetaCyc: PWY-7897 P40_00555 4675e1f3bd5734dc2a5e4a8d1e65a615 177 Pfam PF16036 Chalcone isomerase-like 66 173 8.2E-19 T 13-10-2018 IPR016087 Chalcone isomerase GO:0016872 P40_00555 4675e1f3bd5734dc2a5e4a8d1e65a615 177 SUPERFAMILY SSF54626 68 172 1.7E-5 T 13-10-2018 IPR036298 Chalcone isomerase superfamily GO:0016872 P40_14675 44ef18aef7236011d072a2772b19f8e5 112 Pfam PF06803 Protein of unknown function (DUF1232) 50 85 2.0E-14 T 13-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 P40_14675 44ef18aef7236011d072a2772b19f8e5 112 PIRSF PIRSF031804 1 112 1.9E-39 T 13-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 P40_10855 e6ed2e8622af9b7d34eb8d35e5c1e9c9 294 PRINTS PR00412 Epoxide hydrolase signature 98 111 5.2E-8 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_10855 e6ed2e8622af9b7d34eb8d35e5c1e9c9 294 PRINTS PR00412 Epoxide hydrolase signature 112 125 5.2E-8 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_10855 e6ed2e8622af9b7d34eb8d35e5c1e9c9 294 PRINTS PR00412 Epoxide hydrolase signature 35 53 5.2E-8 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_10855 e6ed2e8622af9b7d34eb8d35e5c1e9c9 294 PRINTS PR00412 Epoxide hydrolase signature 263 285 5.2E-8 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 P40_10855 e6ed2e8622af9b7d34eb8d35e5c1e9c9 294 Gene3D G3DSA:3.40.50.1820 4 288 9.6E-71 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_10855 e6ed2e8622af9b7d34eb8d35e5c1e9c9 294 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 8.3E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_10855 e6ed2e8622af9b7d34eb8d35e5c1e9c9 294 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 8.3E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_10855 e6ed2e8622af9b7d34eb8d35e5c1e9c9 294 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 8.3E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_10855 e6ed2e8622af9b7d34eb8d35e5c1e9c9 294 Pfam PF00561 alpha/beta hydrolase fold 29 148 1.4E-24 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_10855 e6ed2e8622af9b7d34eb8d35e5c1e9c9 294 SUPERFAMILY SSF53474 5 287 2.54E-60 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_17490 3b01e9f874d1824a338adbe7a8a73155 178 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 29 166 1.5E-39 T 13-10-2018 IPR022262 Lipoprotein, putative P40_04640 3c8f9595b3e7a68f15ff30e321f862c2 498 Pfam PF04293 SpoVR like protein 8 441 2.7E-175 T 13-10-2018 IPR007390 Sporulation stage V, protein R P40_18035 43efbf19276c6386ee5798ca3f9c8075 210 Gene3D G3DSA:1.10.357.10 55 209 7.2E-23 T 13-10-2018 P40_18035 43efbf19276c6386ee5798ca3f9c8075 210 SUPERFAMILY SSF46689 6 73 9.98E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_18035 43efbf19276c6386ee5798ca3f9c8075 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 3.0E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 P40_18035 43efbf19276c6386ee5798ca3f9c8075 210 Gene3D G3DSA:1.10.10.60 3 54 6.0E-19 T 13-10-2018 P40_14285 99a4390730ccb889c2e9eb403e374d0a 128 PIRSF PIRSF005610 1 121 5.9E-28 T 13-10-2018 IPR007360 Invasion gene expression up-regulator, SirB P40_14285 99a4390730ccb889c2e9eb403e374d0a 128 Pfam PF04247 Invasion gene expression up-regulator, SirB 4 123 9.4E-39 T 13-10-2018 IPR007360 Invasion gene expression up-regulator, SirB P40_02970 b9b1b6be44e61b36876e42553a4e60c3 422 Pfam PF01384 Phosphate transporter family 26 409 9.7E-113 T 13-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 P40_19325 940c7b8a77d900b36da7f71db75294c4 177 Gene3D G3DSA:2.30.30.830 82 175 3.0E-29 T 13-10-2018 P40_19325 940c7b8a77d900b36da7f71db75294c4 177 PIRSF PIRSF016481 6 177 2.3E-42 T 13-10-2018 IPR007446 Pilus assembly protein PilP P40_19325 940c7b8a77d900b36da7f71db75294c4 177 Pfam PF04351 Pilus assembly protein, PilP 31 174 1.4E-45 T 13-10-2018 IPR007446 Pilus assembly protein PilP P40_03300 f4ba5e5f30dd074e2fc5e99b1177cf00 202 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 46 177 2.7E-22 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_16915 ede6f0f72c1e827d7ed9cbc04d1f7771 510 SUPERFAMILY SSF52096 83 431 5.47E-29 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_16915 ede6f0f72c1e827d7ed9cbc04d1f7771 510 Gene3D G3DSA:2.30.42.10 129 227 7.9E-53 T 13-10-2018 P40_16915 ede6f0f72c1e827d7ed9cbc04d1f7771 510 Gene3D G3DSA:3.90.226.10 228 464 7.9E-53 T 13-10-2018 P40_16915 ede6f0f72c1e827d7ed9cbc04d1f7771 510 Gene3D G3DSA:3.30.750.170 77 423 7.9E-53 T 13-10-2018 P40_16915 ede6f0f72c1e827d7ed9cbc04d1f7771 510 Pfam PF03572 Peptidase family S41 245 394 6.3E-13 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 P40_16655 16a87ca3c4fb9ec986e3b8fff83bc801 428 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 40 417 6.6E-117 T 13-10-2018 IPR013397 CRISPR-associated protein Csy1 P40_16655 16a87ca3c4fb9ec986e3b8fff83bc801 428 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 41 411 5.7E-142 T 13-10-2018 IPR013397 CRISPR-associated protein Csy1 P40_16650 2ad345a22015da284ce95c8373633783 328 TIGRFAM TIGR02565 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 7 318 7.2E-91 T 13-10-2018 IPR013398 CRISPR-associated protein Csy2 P40_16650 2ad345a22015da284ce95c8373633783 328 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 8 316 2.8E-113 T 13-10-2018 IPR013398 CRISPR-associated protein Csy2 P40_06900 d93a8b35c3fde459c216239875b064f8 269 Pfam PF10670 Domain of unknown function (DUF4198) 21 245 2.9E-60 T 13-10-2018 IPR019613 Protein of unknown function DUF4198 P40_08295 bbc2d11c76c4a40c737bf6e32c849e72 204 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 5 204 5.8E-61 T 13-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like P40_08295 bbc2d11c76c4a40c737bf6e32c849e72 204 Gene3D G3DSA:2.160.10.10 90 198 2.0E-26 T 13-10-2018 P40_08295 bbc2d11c76c4a40c737bf6e32c849e72 204 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 155 189 9.0E-8 T 13-10-2018 IPR001451 Hexapeptide repeat P40_08295 bbc2d11c76c4a40c737bf6e32c849e72 204 Gene3D G3DSA:3.40.50.20 1 89 3.1E-19 T 13-10-2018 P40_08295 bbc2d11c76c4a40c737bf6e32c849e72 204 SUPERFAMILY SSF51161 4 204 9.15E-42 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily P40_08295 bbc2d11c76c4a40c737bf6e32c849e72 204 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 164 192 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 P40_16865 a2deca3d8f7bb0830fbde6f443c491d1 462 Pfam PF01523 Putative modulator of DNA gyrase 20 313 9.9E-68 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 P40_16865 a2deca3d8f7bb0830fbde6f443c491d1 462 PIRSF PIRSF004919 2 462 5.4E-143 T 13-10-2018 IPR025502 TldD P40_16865 a2deca3d8f7bb0830fbde6f443c491d1 462 Gene3D G3DSA:3.30.2290.10 2 221 1.8E-16 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal P40_16865 a2deca3d8f7bb0830fbde6f443c491d1 462 SUPERFAMILY SSF111283 6 461 7.85E-130 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 P40_10555 f5dc2ff5e87d5757e0ea504cbf24618d 496 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 67 490 3.4E-195 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath P40_10555 f5dc2ff5e87d5757e0ea504cbf24618d 496 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 490 3.9E-219 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath P40_10315 84d45a971746b6fd631bfbe69241ad3c 214 Pfam PF11198 Protein of unknown function (DUF2857) 10 182 1.0E-43 T 13-10-2018 IPR021364 Protein of unknown function DUF2857 P40_06775 4141c54d5c36e570a0f993095b6ac5d8 310 SUPERFAMILY SSF50956 52 308 7.72E-30 T 13-10-2018 P40_06775 4141c54d5c36e570a0f993095b6ac5d8 310 Pfam PF06977 SdiA-regulated 57 306 3.8E-82 T 13-10-2018 IPR009722 SdiA-regulated P40_10195 11864f62e3a0b080da9ef3c65a3d5be1 742 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 651 6.1E-255 T 13-10-2018 IPR022458 Conjugative coupling factor TraG/TraD P40_10195 11864f62e3a0b080da9ef3c65a3d5be1 742 SUPERFAMILY SSF52540 149 649 3.16E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_10195 11864f62e3a0b080da9ef3c65a3d5be1 742 Pfam PF12696 TraM recognition site of TraD and TraG 502 630 7.2E-12 T 13-10-2018 IPR032689 TraD/TraG, TraM recognition site P40_10195 11864f62e3a0b080da9ef3c65a3d5be1 742 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 651 0.0 T 13-10-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 P40_10195 11864f62e3a0b080da9ef3c65a3d5be1 742 Gene3D G3DSA:3.40.50.300 169 253 1.2E-9 T 13-10-2018 P40_10195 11864f62e3a0b080da9ef3c65a3d5be1 742 Gene3D G3DSA:3.40.50.300 422 652 5.0E-28 T 13-10-2018 P40_21130 225f5073103a6325de1063aae686d413 194 Gene3D G3DSA:3.40.50.150 5 192 6.8E-55 T 13-10-2018 P40_21130 225f5073103a6325de1063aae686d413 194 Pfam PF01596 O-methyltransferase 29 160 6.2E-29 T 13-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 P40_21130 225f5073103a6325de1063aae686d413 194 SUPERFAMILY SSF53335 21 191 9.6E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P40_03195 37302f51ecd8bfa9b3408eae6cabd2a1 246 SUPERFAMILY SSF56925 176 246 1.07E-6 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P40_03195 37302f51ecd8bfa9b3408eae6cabd2a1 246 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 4 246 6.5E-61 T 13-10-2018 IPR026387 Outer membrane protein P40_08270 f05c89f041ebe9fcf2fa25bd15e9ce87 173 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 157 1.9E-24 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_00590 07626b932ce78e5608c16e9a341ee220 155 SUPERFAMILY SSF55729 7 142 1.34E-21 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_00590 07626b932ce78e5608c16e9a341ee220 155 Pfam PF13673 Acetyltransferase (GNAT) domain 53 143 9.2E-13 T 13-10-2018 IPR000182 GNAT domain P40_00590 07626b932ce78e5608c16e9a341ee220 155 Gene3D G3DSA:3.40.630.30 4 154 1.1E-21 T 13-10-2018 P40_00320 bb012328431e001007d5fa95eecfecac 339 Pfam PF01339 CheB methylesterase 150 326 1.7E-37 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 P40_00320 bb012328431e001007d5fa95eecfecac 339 Gene3D G3DSA:3.40.50.180 143 330 7.8E-44 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal P40_00320 bb012328431e001007d5fa95eecfecac 339 SUPERFAMILY SSF52738 145 333 1.44E-44 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal P40_05490 3c4d872c7d4233d75bd39d5ab7fe6539 352 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 326 2.1E-33 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_02345 a1141fbcabfbf9ab0d8d4c64a983bba7 398 Pfam PF07690 Major Facilitator Superfamily 21 331 1.9E-35 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P40_02345 a1141fbcabfbf9ab0d8d4c64a983bba7 398 SUPERFAMILY SSF103473 6 387 3.92E-53 T 13-10-2018 IPR036259 MFS transporter superfamily P40_02345 a1141fbcabfbf9ab0d8d4c64a983bba7 398 Gene3D G3DSA:1.20.1250.20 13 387 3.5E-45 T 13-10-2018 P40_01610 fc966a9a7048afe7d209cb071ae2dacb 210 SUPERFAMILY SSF109604 26 203 2.46E-19 T 13-10-2018 P40_01610 fc966a9a7048afe7d209cb071ae2dacb 210 PIRSF PIRSF035170 4 210 6.5E-52 T 13-10-2018 IPR009218 Predicted HD phosphohydrolase P40_01610 fc966a9a7048afe7d209cb071ae2dacb 210 Gene3D G3DSA:1.10.3210.10 23 151 1.3E-5 T 13-10-2018 P40_07350 3f79bf2c7150ba24799aa420d1dee413 249 Pfam PF01578 Cytochrome C assembly protein 38 188 3.2E-23 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 P40_07350 3f79bf2c7150ba24799aa420d1dee413 249 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 49 66 3.0E-46 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07350 3f79bf2c7150ba24799aa420d1dee413 249 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 160 186 3.0E-46 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07350 3f79bf2c7150ba24799aa420d1dee413 249 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 104 124 3.0E-46 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07350 3f79bf2c7150ba24799aa420d1dee413 249 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 125 145 3.0E-46 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07350 3f79bf2c7150ba24799aa420d1dee413 249 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 66 86 3.0E-46 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07350 3f79bf2c7150ba24799aa420d1dee413 249 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 208 232 3.0E-46 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_07350 3f79bf2c7150ba24799aa420d1dee413 249 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 50 232 3.6E-68 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 P40_03380 be28de1322fc7a4cb38215254a6c8f6c 308 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 283 2.6E-58 T 13-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 P40_14625 bfedb04cd44a2f47f05da6ea6b5d9555 454 PIRSF PIRSF005850 1 452 1.8E-150 T 13-10-2018 IPR019219 Protein of unknown function DUF2130 P40_14625 bfedb04cd44a2f47f05da6ea6b5d9555 454 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 179 438 1.8E-101 T 13-10-2018 IPR019219 Protein of unknown function DUF2130 P40_01975 175b5d602b3950128d4e9bf7b9722151 114 Pfam PF03795 YCII-related domain 1 111 8.8E-25 T 13-10-2018 IPR005545 YCII-related P40_01975 175b5d602b3950128d4e9bf7b9722151 114 SUPERFAMILY SSF54909 1 112 1.39E-32 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel P40_01975 175b5d602b3950128d4e9bf7b9722151 114 Gene3D G3DSA:3.30.70.1060 1 113 6.4E-41 T 13-10-2018 P40_13535 08aa6b87eacddf716bc390685f882e1f 144 SUPERFAMILY SSF48452 3 67 9.11E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_04645 2ea496d393c0120bd605a3329c7c3e46 427 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 425 38.049 T 13-10-2018 IPR006698 Uncharacterised protein family UPF0229 P40_04645 2ea496d393c0120bd605a3329c7c3e46 427 Pfam PF04285 Protein of unknown function (DUF444) 4 422 2.9E-179 T 13-10-2018 IPR006698 Uncharacterised protein family UPF0229 P40_19205 85ed3e5ab9d4457b6d0c78842facfd80 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 289 3.2E-39 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_05095 4feb7a0f39b7c92fdb1d29af83b8668a 348 Pfam PF13406 Transglycosylase SLT domain 34 336 2.0E-98 T 13-10-2018 IPR031304 Transglycosylase SLT domain 2 P40_05095 4feb7a0f39b7c92fdb1d29af83b8668a 348 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 40 339 5.1E-104 T 13-10-2018 IPR011757 Lytic transglycosylase MltB P40_05095 4feb7a0f39b7c92fdb1d29af83b8668a 348 SUPERFAMILY SSF53955 15 341 3.37E-83 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily P40_05095 4feb7a0f39b7c92fdb1d29af83b8668a 348 Gene3D G3DSA:1.10.530.10 75 336 4.5E-110 T 13-10-2018 P40_05095 4feb7a0f39b7c92fdb1d29af83b8668a 348 Gene3D G3DSA:1.10.8.350 45 209 4.5E-110 T 13-10-2018 P40_19350 b3c63e014c0e130b1851ca0734deec83 431 Pfam PF13644 DKNYY family 182 351 6.3E-6 T 13-10-2018 IPR027375 DKNYY family P40_19350 b3c63e014c0e130b1851ca0734deec83 431 Pfam PF13644 DKNYY family 60 171 2.5E-9 T 13-10-2018 IPR027375 DKNYY family P40_07630 635189b038813f2c056080b14779739e 256 SUPERFAMILY SSF52096 8 256 1.61E-69 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_07630 635189b038813f2c056080b14779739e 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 254 7.3E-48 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_07630 635189b038813f2c056080b14779739e 256 Gene3D G3DSA:3.90.226.10 2 242 8.1E-69 T 13-10-2018 P40_01040 09204547d39333c2794b935bd0bfe272 69 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 1 44 1.6E-6 T 13-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB P40_06430 bfe250b557aadea476aed7a30b299335 204 Gene3D G3DSA:1.10.357.10 10 202 2.5E-11 T 13-10-2018 P40_06430 bfe250b557aadea476aed7a30b299335 204 SUPERFAMILY SSF46689 26 81 2.34E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P40_07270 11dee6395390aba9acf953ebcfbd1e7a 81 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 81 25.376 T 13-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 P40_07270 11dee6395390aba9acf953ebcfbd1e7a 81 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 3 80 7.8E-17 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 P40_07270 11dee6395390aba9acf953ebcfbd1e7a 81 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 7 77 2.4E-17 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 P40_04045 4a6f1f379fa2db10b70485995a806f2e 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 112 4.1E-20 T 13-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 P40_04045 4a6f1f379fa2db10b70485995a806f2e 135 SUPERFAMILY SSF51316 1 133 6.17E-47 T 13-10-2018 IPR011057 Mss4-like superfamily P40_04045 4a6f1f379fa2db10b70485995a806f2e 135 Gene3D G3DSA:2.170.150.70 2 116 4.6E-16 T 13-10-2018 P40_15255 d170a2e17fff62be7c6a233263b9a69c 144 Gene3D G3DSA:2.40.70.10 2 130 9.0E-37 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily P40_15255 d170a2e17fff62be7c6a233263b9a69c 144 SUPERFAMILY SSF50630 5 137 1.35E-46 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily P40_15255 d170a2e17fff62be7c6a233263b9a69c 144 Pfam PF05618 Putative ATP-dependant zinc protease 5 135 3.3E-40 T 13-10-2018 P40_16090 3822fbe11891b43835539b74d9b809c6 263 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 256 3.5E-69 T 13-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 P40_16090 3822fbe11891b43835539b74d9b809c6 263 Pfam PF01311 Bacterial export proteins, family 1 14 246 5.9E-68 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 P40_16090 3822fbe11891b43835539b74d9b809c6 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 4.0E-29 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 P40_16090 3822fbe11891b43835539b74d9b809c6 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 4.0E-29 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 P40_16090 3822fbe11891b43835539b74d9b809c6 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 4.0E-29 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 P40_16090 3822fbe11891b43835539b74d9b809c6 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 4.0E-29 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 P40_09585 de1e7ec2eb24877cbf992307eca0d599 150 TIGRFAM TIGR01841 phasin: phasin family protein 60 141 5.5E-11 T 13-10-2018 IPR010127 Phasin, subfamily 1 P40_09585 de1e7ec2eb24877cbf992307eca0d599 150 Pfam PF09361 Phasin protein 39 134 1.9E-11 T 13-10-2018 IPR018968 Phasin P40_18055 8b6700f3c56cc960c79344901e61874d 351 Gene3D G3DSA:1.25.40.10 36 295 1.5E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_18055 8b6700f3c56cc960c79344901e61874d 351 SUPERFAMILY SSF48452 165 341 4.14E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_00785 9f59ba4d04b6181e18f28e22a6842673 473 SUPERFAMILY SSF53474 81 434 1.39E-15 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_05360 6f3729b3dc823e3abf06bfe48ed5da9e 340 Pfam PF02628 Cytochrome oxidase assembly protein 3 320 1.2E-80 T 13-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 P40_08300 9bab5df0ec4cc9b000c5099a7f8c55b5 258 Pfam PF02698 DUF218 domain 84 213 1.7E-27 T 13-10-2018 IPR003848 Domain of unknown function DUF218 P40_18920 8f1ce320e79d5c7b393ba85cd27b422e 277 Pfam PF01925 Sulfite exporter TauE/SafE 20 272 1.0E-48 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 P40_21680 46d58ba6b6be6a4936a0908d1110a43a 417 Pfam PF10011 Predicted membrane protein (DUF2254) 15 370 9.4E-103 T 13-10-2018 IPR018723 Protein of unknown function DUF2254, membrane P40_12365 e47e27f0de199e37df6683fc4de041c7 711 Pfam PF07095 Intracellular growth attenuator protein IgaA 49 459 1.8E-32 T 13-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 P40_12365 e47e27f0de199e37df6683fc4de041c7 711 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 42 138 2.0E-5 T 13-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 P40_12365 e47e27f0de199e37df6683fc4de041c7 711 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 287 652 2.0E-10 T 13-10-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 P40_17730 4ba6dc622fd49a0e00a19e63f92366b7 70 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 3.9E-23 T 13-10-2018 IPR018638 Domain of unknown function DUF2061, membrane P40_12870 94210c8ee7396d4c03bbb5f245b04d14 313 Pfam PF10118 Predicted metal-dependent hydrolase 20 290 5.0E-68 T 13-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 P40_12870 94210c8ee7396d4c03bbb5f245b04d14 313 PIRSF PIRSF007580 2 313 1.9E-85 T 13-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 P40_11530 dd553ad83c86891d2975c2e9f0f8e428 276 SUPERFAMILY SSF53474 47 259 2.53E-20 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_11530 dd553ad83c86891d2975c2e9f0f8e428 276 Pfam PF12697 Alpha/beta hydrolase family 60 236 8.1E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P40_11530 dd553ad83c86891d2975c2e9f0f8e428 276 Gene3D G3DSA:3.40.50.1820 37 253 1.1E-19 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_15965 b77ebacc247ffcc2337a1ddd876bb951 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 13-10-2018 IPR000540 Flagellar motor protein MotA, conserved site P40_15965 b77ebacc247ffcc2337a1ddd876bb951 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 3 281 1.4E-112 T 13-10-2018 IPR022522 Flagellar motor stator, MotA P40_15965 b77ebacc247ffcc2337a1ddd876bb951 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 237 2.3E-10 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel P40_03435 0821eab4d32bac309955608c06dc1d1b 80 SUPERFAMILY SSF143120 1 79 7.98E-19 T 13-10-2018 IPR036165 YefM-like superfamily P40_03435 0821eab4d32bac309955608c06dc1d1b 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 68 2.5E-18 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM P40_03435 0821eab4d32bac309955608c06dc1d1b 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 54 6.9E-8 T 13-10-2018 P40_03435 0821eab4d32bac309955608c06dc1d1b 80 Gene3D G3DSA:3.40.1620.40 3 67 1.6E-23 T 13-10-2018 P40_05795 94af57cbf310d9f6d9c82e36f4d10ec3 436 SUPERFAMILY SSF56954 14 426 9.02E-65 T 13-10-2018 P40_05795 94af57cbf310d9f6d9c82e36f4d10ec3 436 Gene3D G3DSA:1.20.1600.10 39 429 1.8E-48 T 13-10-2018 P40_05795 94af57cbf310d9f6d9c82e36f4d10ec3 436 Pfam PF02321 Outer membrane efflux protein 44 225 3.1E-15 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_05795 94af57cbf310d9f6d9c82e36f4d10ec3 436 Pfam PF02321 Outer membrane efflux protein 250 423 7.3E-21 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P40_07570 2a508780a58408063fbd830bf6e4d46a 422 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 323 3.1E-27 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_20545 7f091c82ad8fa58a44458e6f81822067 255 SUPERFAMILY SSF52096 4 253 5.98E-69 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P40_20545 7f091c82ad8fa58a44458e6f81822067 255 Gene3D G3DSA:3.90.226.10 3 255 1.4E-68 T 13-10-2018 P40_20545 7f091c82ad8fa58a44458e6f81822067 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 254 4.5E-52 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 P40_13610 9ac7d5b3d2f65eea9aaf446945778f43 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 195 8.0E-13 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P40_13610 9ac7d5b3d2f65eea9aaf446945778f43 212 PIRSF PIRSF000239 1 208 2.4E-81 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P40_13610 9ac7d5b3d2f65eea9aaf446945778f43 212 Pfam PF00578 AhpC/TSA family 6 134 8.1E-35 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P40_13610 9ac7d5b3d2f65eea9aaf446945778f43 212 Gene3D G3DSA:3.30.1020.10 146 209 4.5E-29 T 13-10-2018 P40_13610 9ac7d5b3d2f65eea9aaf446945778f43 212 Gene3D G3DSA:3.40.30.10 1 145 7.3E-55 T 13-10-2018 P40_13610 9ac7d5b3d2f65eea9aaf446945778f43 212 SUPERFAMILY SSF52833 3 209 2.2E-74 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_08340 72d955a4894cadcf6a94bccc6ff6e451 258 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 10 235 1.4E-27 T 13-10-2018 P40_05200 19b1bbfb16d26bcd1dbe45df081bb697 329 Pfam PF02562 PhoH-like protein 116 319 8.2E-94 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 P40_05200 19b1bbfb16d26bcd1dbe45df081bb697 329 SUPERFAMILY SSF52540 115 291 1.43E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P40_05200 19b1bbfb16d26bcd1dbe45df081bb697 329 Gene3D G3DSA:3.40.50.300 113 319 1.8E-73 T 13-10-2018 P40_02375 33f21fde321bf264b3403eb210174f5a 371 Gene3D G3DSA:2.120.10.30 29 371 1.9E-115 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P40_02375 33f21fde321bf264b3403eb210174f5a 371 Pfam PF07995 Glucose / Sorbosone dehydrogenase 42 367 1.2E-122 T 13-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase P40_02375 33f21fde321bf264b3403eb210174f5a 371 SUPERFAMILY SSF50952 29 370 2.35E-41 T 13-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 P40_16075 02564dd3b2d4400b292a0d1f3debfbf5 141 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 26 92 2.0E-22 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 P40_16075 02564dd3b2d4400b292a0d1f3debfbf5 141 Pfam PF04347 Flagellar biosynthesis protein, FliO 38 122 2.9E-21 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 P40_01325 613780a3e2bb8a37d0b341b5b1a964a0 449 Gene3D G3DSA:2.40.160.60 241 449 3.1E-20 T 13-10-2018 P40_01325 613780a3e2bb8a37d0b341b5b1a964a0 449 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 288 449 6.0E-13 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) P40_01325 613780a3e2bb8a37d0b341b5b1a964a0 449 SUPERFAMILY SSF56935 267 449 3.84E-14 T 13-10-2018 P40_04890 83b8f2720e0982bb55970737a11aca1c 286 PIRSF PIRSF007580 3 284 9.3E-81 T 13-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 P40_04890 83b8f2720e0982bb55970737a11aca1c 286 Pfam PF10118 Predicted metal-dependent hydrolase 16 265 2.4E-83 T 13-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 P40_15565 08eb35344e8b7276d50afcd57910b826 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 24 301 7.3E-41 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_15565 08eb35344e8b7276d50afcd57910b826 327 Gene3D G3DSA:3.40.190.170 16 325 5.4E-69 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_16845 dc3efdc40b1e6ede65c0bdf9a43702cb 451 SUPERFAMILY SSF111283 19 451 3.14E-115 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 P40_16845 dc3efdc40b1e6ede65c0bdf9a43702cb 451 Gene3D G3DSA:3.30.2290.10 7 237 1.0E-84 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal P40_16845 dc3efdc40b1e6ede65c0bdf9a43702cb 451 Pfam PF01523 Putative modulator of DNA gyrase 38 328 1.5E-53 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 P40_13515 b7bd2da92fba2fa6f6dba41e9731c553 119 Pfam PF11776 Nickel/cobalt transporter regulator 64 114 1.2E-21 T 13-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB P40_13515 b7bd2da92fba2fa6f6dba41e9731c553 119 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 61 119 6.0E-8 T 13-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB P40_13515 b7bd2da92fba2fa6f6dba41e9731c553 119 Gene3D G3DSA:3.10.450.160 54 119 9.2E-16 T 13-10-2018 P40_10120 29a0c0f6fb20f876d5d164af4b412470 317 Pfam PF06834 TraU protein 23 303 8.4E-66 T 13-10-2018 IPR009649 TraU P40_10120 29a0c0f6fb20f876d5d164af4b412470 317 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 16 313 7.7E-117 T 13-10-2018 IPR026331 Integrating conjugative element protein PFL_4710 P40_14650 5e64e35b20c17bcb6e36fa71ff5e775d 194 Pfam PF08849 Putative inner membrane protein (DUF1819) 3 182 1.1E-44 T 13-10-2018 IPR014948 Protein of unknown function DUF1819, putative inner membrane P40_14650 5e64e35b20c17bcb6e36fa71ff5e775d 194 Gene3D G3DSA:1.10.3540.10 2 194 1.1E-60 T 13-10-2018 P40_20880 a57e174d9c62a7083737d4ba97fe18e4 110 Pfam PF03334 Na+/H+ antiporter subunit 12 93 8.5E-26 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 P40_20880 a57e174d9c62a7083737d4ba97fe18e4 110 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 99 3.3E-28 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 P40_17740 564eb6ae79d9b390407e31a00ddcc4d2 130 Pfam PF11026 Protein of unknown function (DUF2721) 4 119 3.4E-35 T 13-10-2018 IPR021279 Protein of unknown function DUF2721 P40_17365 3f12af22092f16085b8227fcacc374b3 77 SUPERFAMILY SSF47598 4 45 5.56E-6 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 P40_14430 904827009399c1d87ba56aa996076c52 222 Pfam PF13835 Domain of unknown function (DUF4194) 26 201 4.4E-31 T 13-10-2018 IPR025449 Protein of unknown function DUF4194 P40_17795 2c4d9c27a8fee569e68504403b73cf7b 204 Pfam PF01810 LysE type translocator 12 203 2.0E-31 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 P40_17795 2c4d9c27a8fee569e68504403b73cf7b 204 PIRSF PIRSF006324 1 204 3.3E-45 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 P40_17145 d9ddc9c1abdd0744b3f028d87ea9ba32 288 SUPERFAMILY SSF103481 187 281 9.55E-14 T 13-10-2018 P40_17145 d9ddc9c1abdd0744b3f028d87ea9ba32 288 SUPERFAMILY SSF103481 43 139 4.97E-9 T 13-10-2018 P40_17145 d9ddc9c1abdd0744b3f028d87ea9ba32 288 Pfam PF00892 EamA-like transporter family 148 278 1.5E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_17145 d9ddc9c1abdd0744b3f028d87ea9ba32 288 Pfam PF00892 EamA-like transporter family 15 136 2.4E-7 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 P40_08260 9e7b37579395d3dd7958011ca020180b 99 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 21 93 1.2E-28 T 13-10-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 P40_09515 303a54590a8eb6740e404d49db16e88b 80 SUPERFAMILY SSF75169 2 80 2.94E-5 T 13-10-2018 IPR027396 DsrEFH-like P40_07375 a4de1804b73ec575f1c70829afe54a6a 414 Pfam PF09925 Predicted membrane protein (DUF2157) 12 149 1.8E-33 T 13-10-2018 IPR018677 Domain of unknown function DUF2157 P40_17465 45d628118c83439c2692140b78aa40fb 101 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 3 101 3.1E-35 T 13-10-2018 IPR021356 Integrating conjugative element protein PFL4702 P40_17465 45d628118c83439c2692140b78aa40fb 101 Pfam PF11190 Protein of unknown function (DUF2976) 15 100 7.3E-28 T 13-10-2018 IPR021356 Integrating conjugative element protein PFL4702 P40_12285 da8a32c98fb351a88b48bd2b66f670f9 102 PIRSF PIRSF029218 1 99 4.8E-25 T 13-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 P40_12285 da8a32c98fb351a88b48bd2b66f670f9 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 92 1.1E-17 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family P40_12285 da8a32c98fb351a88b48bd2b66f670f9 102 Gene3D G3DSA:3.30.2310.20 1 98 2.1E-24 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily P40_15470 8895ddcfcb191e23b37c20e6e5a592b9 245 Pfam PF03741 Integral membrane protein TerC family 16 206 3.3E-50 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 P40_08110 8e240fd3e3ef7456dfb04d9c9f6cf262 252 Pfam PF13440 Polysaccharide biosynthesis protein 9 248 4.1E-8 T 13-10-2018 P40_17310 a822b99860d1e2d555c6e2c5c44ef387 214 Pfam PF11198 Protein of unknown function (DUF2857) 14 186 6.8E-43 T 13-10-2018 IPR021364 Protein of unknown function DUF2857 P40_06070 4757da894212c8dff2933a7529fcabd8 138 SUPERFAMILY SSF54593 5 127 2.82E-19 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_06070 4757da894212c8dff2933a7529fcabd8 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 120 3.2E-8 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain P40_06070 4757da894212c8dff2933a7529fcabd8 138 Gene3D G3DSA:3.10.180.10 1 130 3.1E-20 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase P40_08640 701011120fdb2af26e3bdd3524a3415e 78 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 61 2.3E-14 T 13-10-2018 IPR008554 Glutaredoxin-like P40_08640 701011120fdb2af26e3bdd3524a3415e 78 SUPERFAMILY SSF52833 1 60 2.18E-12 T 13-10-2018 IPR036249 Thioredoxin-like superfamily P40_08640 701011120fdb2af26e3bdd3524a3415e 78 Gene3D G3DSA:3.40.30.10 1 77 1.7E-19 T 13-10-2018 P40_00270 ffc43195e5fbc79d52305b7d96645279 154 Pfam PF04143 Sulphur transport 9 140 3.2E-7 T 13-10-2018 IPR007272 Sulphur transport domain P40_06415 5a0ad4a957405259e6499f9229179b0c 145 Pfam PF07681 DoxX 16 102 2.8E-24 T 13-10-2018 IPR032808 DoxX family P40_12760 46f2070cbb49fcad1e99be267c1368b6 220 Gene3D G3DSA:3.30.70.1070 142 211 4.9E-13 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 P40_12760 46f2070cbb49fcad1e99be267c1368b6 220 SUPERFAMILY SSF110997 140 206 2.62E-17 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 P40_12760 46f2070cbb49fcad1e99be267c1368b6 220 Pfam PF05036 Sporulation related domain 140 208 7.9E-17 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 P40_04490 e609dbdef3e259455146fdab8bb6d324 323 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 89 186 3.8E-11 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 P40_04490 e609dbdef3e259455146fdab8bb6d324 323 SUPERFAMILY SSF56645 22 196 6.94E-22 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 P40_04490 e609dbdef3e259455146fdab8bb6d324 323 Gene3D G3DSA:2.40.110.10 88 196 5.3E-17 T 13-10-2018 P40_21490 63e250da3c1bf044213e5633557ee13d 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 25 309 1.2E-40 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_04130 d966af51d5c9ff584b447ca22b58192c 274 Pfam PF04773 FecR protein 56 149 2.9E-18 T 13-10-2018 IPR006860 FecR protein P40_04130 d966af51d5c9ff584b447ca22b58192c 274 Gene3D G3DSA:2.60.120.1440 51 177 1.6E-10 T 13-10-2018 P40_03510 01cbf4bb3c290c2bff41735639c3de4e 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 286 1.7E-31 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_14010 e8922b7fabe126559b29d4b79d62f0c5 345 Pfam PF10974 Protein of unknown function (DUF2804) 15 344 3.9E-90 T 13-10-2018 IPR021243 Protein of unknown function DUF2804 P40_09575 e75c351c82aaf45c18c10636ad6dbab2 190 Gene3D G3DSA:3.40.630.30 6 171 1.4E-27 T 13-10-2018 P40_09575 e75c351c82aaf45c18c10636ad6dbab2 190 Pfam PF00583 Acetyltransferase (GNAT) family 63 146 9.2E-10 T 13-10-2018 IPR000182 GNAT domain P40_09575 e75c351c82aaf45c18c10636ad6dbab2 190 SUPERFAMILY SSF55729 6 177 1.24E-26 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase P40_13945 29c2c536965b69c950443c6d654d4f31 331 Gene3D G3DSA:3.40.190.170 59 319 2.1E-17 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_21375 15f63b7abf3e085cf98197009955ec89 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 339 9.3E-38 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_21375 15f63b7abf3e085cf98197009955ec89 343 SUPERFAMILY SSF161098 99 327 1.62E-17 T 13-10-2018 IPR035906 MetI-like superfamily P40_01350 402274d742fd70c390e63635719df989 71 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 6 69 1.1E-22 T 13-10-2018 IPR012662 Conserved hypothetical protein CHP02449 P40_12925 05fe15ab7bcf6134ddec246b452b0978 135 Pfam PF04134 Protein of unknown function, DUF393 8 116 1.9E-12 T 13-10-2018 IPR007263 Protein of unknown function DUF393 P40_03295 df40340b5d211fdb04d1148f75ca6480 366 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 59 331 6.4E-37 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_03295 df40340b5d211fdb04d1148f75ca6480 366 PIRSF PIRSF039026 11 366 2.4E-127 T 13-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like P40_03295 df40340b5d211fdb04d1148f75ca6480 366 Gene3D G3DSA:3.40.190.10 161 332 1.1E-101 T 13-10-2018 P40_03295 df40340b5d211fdb04d1148f75ca6480 366 Gene3D G3DSA:3.40.190.170 47 345 1.1E-101 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_01645 deb0750ce75d2d31f2f2ef1b0950a91c 128 SUPERFAMILY SSF82784 9 127 2.36E-33 T 13-10-2018 IPR036102 OsmC/Ohr superfamily P40_01645 deb0750ce75d2d31f2f2ef1b0950a91c 128 Gene3D G3DSA:3.30.300.20 2 128 4.6E-34 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta P40_01645 deb0750ce75d2d31f2f2ef1b0950a91c 128 Pfam PF02566 OsmC-like protein 33 125 2.1E-18 T 13-10-2018 IPR003718 OsmC/Ohr family P40_16840 9be71a8e807ae4f149bb63cc80dc4733 309 Pfam PF09955 Predicted integral membrane protein (DUF2189) 83 202 1.4E-5 T 13-10-2018 IPR018692 Predicted integral membrane protein DUF2189 P40_20350 4d5a783069e3173c5a578b2602e64db5 85 Pfam PF04380 Membrane fusogenic activity 1 77 1.5E-26 T 13-10-2018 IPR007475 Membrane fusogenic activity P40_19805 32685b88926305960fb202ea49d0f4ea 78 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 5 68 1.1E-27 T 13-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor P40_19805 32685b88926305960fb202ea49d0f4ea 78 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 16 70 4.0E-13 T 13-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor P40_12850 96744bb7c5b0c292d9b3f7f0d75c1c07 431 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 2.5E-59 T 13-10-2018 P40_12850 96744bb7c5b0c292d9b3f7f0d75c1c07 431 PRINTS PR00173 Glutamate-aspartate symporter signature 152 174 2.5E-59 T 13-10-2018 P40_12850 96744bb7c5b0c292d9b3f7f0d75c1c07 431 PRINTS PR00173 Glutamate-aspartate symporter signature 302 328 2.5E-59 T 13-10-2018 P40_12850 96744bb7c5b0c292d9b3f7f0d75c1c07 431 PRINTS PR00173 Glutamate-aspartate symporter signature 200 219 2.5E-59 T 13-10-2018 P40_12850 96744bb7c5b0c292d9b3f7f0d75c1c07 431 PRINTS PR00173 Glutamate-aspartate symporter signature 235 254 2.5E-59 T 13-10-2018 P40_12850 96744bb7c5b0c292d9b3f7f0d75c1c07 431 PRINTS PR00173 Glutamate-aspartate symporter signature 364 384 2.5E-59 T 13-10-2018 P40_12850 96744bb7c5b0c292d9b3f7f0d75c1c07 431 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 2.5E-59 T 13-10-2018 P40_12850 96744bb7c5b0c292d9b3f7f0d75c1c07 431 PRINTS PR00173 Glutamate-aspartate symporter signature 337 356 2.5E-59 T 13-10-2018 P40_12850 96744bb7c5b0c292d9b3f7f0d75c1c07 431 SUPERFAMILY SSF118215 3 410 1.14E-113 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 P40_12850 96744bb7c5b0c292d9b3f7f0d75c1c07 431 Pfam PF00375 Sodium:dicarboxylate symporter family 3 409 3.4E-128 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 P40_12850 96744bb7c5b0c292d9b3f7f0d75c1c07 431 Gene3D G3DSA:1.10.3860.10 1 415 1.5E-134 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 P40_09770 844d6a09f61a8425b3f053a9cce964be 83 Pfam PF00873 AcrB/AcrD/AcrF family 4 78 3.2E-8 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P40_13005 8b2f068ac5e7034bd41bfadd12a7e8ed 395 Pfam PF05816 Toxic anion resistance protein (TelA) 63 377 1.9E-68 T 13-10-2018 IPR008863 Toxic anion resistance P40_02470 ccc70558d222303bfc7f3347f891a7af 438 SUPERFAMILY SSF56935 32 313 2.44E-5 T 13-10-2018 P40_01865 886de8874b393a75eae4ed43b48056d9 503 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 17 435 7.3E-132 T 13-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane P40_06910 e13115e38f0c6fbf9016d5b751c7634d 201 Pfam PF16357 Putative PepSY_TM-like 9 201 1.1E-79 T 13-10-2018 IPR032307 Putative PepSY TM-like protein P40_21215 1f14333c84bac5f53d204c313c02162e 119 Pfam PF10067 Predicted membrane protein (DUF2306) 3 107 1.5E-16 T 13-10-2018 IPR018750 Protein of unknown function DUF2306, membrane P40_09010 e9584cb2de366d959f9f4e37491434c6 347 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 334 1.0E-34 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_11675 c98ac69ccd69cceed9b0e25aadcc4cce 331 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 9 310 1.3E-35 T 13-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD P40_11675 c98ac69ccd69cceed9b0e25aadcc4cce 331 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 34 311 1.1E-24 T 13-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD P40_04420 9c8ce91f6f2bd94404a26a7841f741d4 163 Pfam PF10722 Putative bacterial sensory transduction regulator 12 133 2.0E-11 T 13-10-2018 IPR019660 Putative sensory transduction regulator YbjN P40_19445 b8e021a29455cf180d921a67c5438b24 326 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 18 321 2.0E-55 T 13-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX P40_20650 e91dcca626263c216d1e5f4564f48cf4 343 PIRSF PIRSF029594 9 343 2.5E-118 T 13-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 P40_20650 e91dcca626263c216d1e5f4564f48cf4 343 Pfam PF11168 Protein of unknown function (DUF2955) 16 154 1.4E-35 T 13-10-2018 IPR022604 Protein of unknown function DUF2955 P40_05945 d25164deae39a34a7151f824a5979aa9 69 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 13 57 1.4E-10 T 13-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system P40_20195 3b03eac8b9872a863caf0c1525ea46fc 710 Gene3D G3DSA:3.60.21.10 68 387 4.7E-67 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like P40_20195 3b03eac8b9872a863caf0c1525ea46fc 710 SUPERFAMILY SSF56300 73 371 1.58E-36 T 13-10-2018 P40_20195 3b03eac8b9872a863caf0c1525ea46fc 710 Pfam PF00149 Calcineurin-like phosphoesterase 73 318 1.1E-8 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 P40_08070 fb72f83e6c0e0ef1adfd9fb24073ed1d 75 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 40 1.9E-5 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM P40_08070 fb72f83e6c0e0ef1adfd9fb24073ed1d 75 SUPERFAMILY SSF143120 3 43 2.09E-8 T 13-10-2018 IPR036165 YefM-like superfamily P40_16715 4ff229dba4434834b6fa7fbf429d5560 170 Pfam PF06295 Protein of unknown function (DUF1043) 8 124 1.0E-23 T 13-10-2018 IPR009386 Protein of unknown function DUF1043 P40_14655 5ea5dea17e95fb00f60b0d335d65eb29 66 Gene3D G3DSA:1.25.40.10 14 66 5.2E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P40_04930 4167bfc495786d07dd016fa753501fae 201 Pfam PF12261 Thermostable hemolysin 11 179 1.4E-50 T 13-10-2018 IPR022050 Thermostable hemolysin P40_10025 1d8eba078bad26a80703866006f1ded6 197 Pfam PF11679 Protein of unknown function (DUF3275) 2 194 5.9E-75 T 13-10-2018 IPR021693 Protein of unknown function DUF3275 P40_00860 254ad1576dd8d4ec405d06fb6ac81a0d 191 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 156 4.8E-21 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_17475 dc34230111774f25caa8bf3387fe9812 223 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 6 204 1.6E-87 T 13-10-2018 IPR021548 Protein of unknown function DUF2895 P40_17475 dc34230111774f25caa8bf3387fe9812 223 Pfam PF11444 Protein of unknown function (DUF2895) 10 203 2.5E-89 T 13-10-2018 IPR021548 Protein of unknown function DUF2895 P40_07955 03a2c4a2e314b9441044c48dd668b767 649 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 131 563 1.7E-94 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_07955 03a2c4a2e314b9441044c48dd668b767 649 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 31 633 2.1E-176 T 13-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ P40_08965 736cd9fabcf5397f2bbfb971217aef2e 127 SUPERFAMILY SSF54637 8 124 7.46E-14 T 13-10-2018 IPR029069 HotDog domain superfamily P40_08965 736cd9fabcf5397f2bbfb971217aef2e 127 Gene3D G3DSA:3.10.129.10 8 125 4.9E-15 T 13-10-2018 P40_15515 1af689a7c93bf5a8ffb9b1e1210c6347 350 Pfam PF03601 Conserved hypothetical protein 698 15 329 6.6E-75 T 13-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 P40_20575 ca5ebee41b38744abb86dd8e4fb2fa0c 170 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 160 5.1E-21 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_13880 48573b5837069d57c90d82ebe1c62dec 337 Gene3D G3DSA:3.40.190.170 53 251 1.3E-13 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_12525 336771832804b3127cc4d2e2684d8bf8 354 Pfam PF11017 Protein of unknown function (DUF2855) 32 344 6.5E-99 T 13-10-2018 IPR021276 Protein of unknown function DUF2855 P40_21070 b6e185dfba64759723cb8175d8c72a8a 92 Gene3D G3DSA:3.30.2310.20 1 92 3.1E-38 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily P40_21070 b6e185dfba64759723cb8175d8c72a8a 92 SUPERFAMILY SSF143011 1 92 1.03E-16 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily P40_21070 b6e185dfba64759723cb8175d8c72a8a 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 3 92 2.6E-28 T 13-10-2018 IPR007711 Toxin HigB-1 P40_13215 18150888c843a3633eb0cfa6df7b3a37 176 Pfam PF02620 Uncharacterized ACR, COG1399 61 172 2.4E-20 T 13-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD P40_10995 43f4fa02f653c570e300ab56e64870db 236 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 13 219 7.5E-42 T 13-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain P40_10995 43f4fa02f653c570e300ab56e64870db 236 SUPERFAMILY SSF103473 24 221 9.94E-5 T 13-10-2018 IPR036259 MFS transporter superfamily P40_12310 d87e217f05b22fb156aa01e9cafe621a 330 SUPERFAMILY SSF53850 132 278 4.78E-5 T 13-10-2018 P40_12310 d87e217f05b22fb156aa01e9cafe621a 330 Gene3D G3DSA:3.40.190.170 58 319 1.5E-19 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_06445 6e7361c359292dd6781622b204418589 270 Pfam PF08223 PaaX-like protein C-terminal domain 177 263 8.7E-5 T 13-10-2018 IPR013225 PaaX-like, C-terminal P40_06445 6e7361c359292dd6781622b204418589 270 Gene3D G3DSA:1.10.10.10 12 78 1.4E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P40_07520 e1d494dd2bfffa2f28b5799f15010e8d 333 Gene3D G3DSA:3.40.190.170 59 220 4.5E-11 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_19435 21d378fb28969d78c60ad8f7e04fbd1a 181 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 55 173 2.4E-24 T 13-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component P40_19435 21d378fb28969d78c60ad8f7e04fbd1a 181 Gene3D G3DSA:3.40.50.10610 33 177 1.2E-5 T 13-10-2018 P40_19435 21d378fb28969d78c60ad8f7e04fbd1a 181 SUPERFAMILY SSF159594 52 178 2.51E-21 T 13-10-2018 P40_14300 e1d7a0354be634d493a6876869334dca 390 Pfam PF05940 NnrS protein 15 384 4.0E-98 T 13-10-2018 IPR010266 NnrS P40_08255 54d140b3d2f46881f907636358f69609 120 SUPERFAMILY SSF47413 56 115 6.57E-5 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P40_08255 54d140b3d2f46881f907636358f69609 120 Gene3D G3DSA:1.10.260.40 44 120 4.7E-5 T 13-10-2018 P40_14065 9d0ced82b8f333c1b242fbc9294cd126 363 Gene3D G3DSA:3.40.190.170 11 328 1.1E-65 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_14065 9d0ced82b8f333c1b242fbc9294cd126 363 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 320 2.9E-40 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_05685 71d46da1fca0d03ff4a361381305ce93 480 Pfam PF01458 Uncharacterized protein family (UPF0051) 219 451 9.3E-66 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 P40_05685 71d46da1fca0d03ff4a361381305ce93 480 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 15 471 1.3E-190 T 13-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 P40_05685 71d46da1fca0d03ff4a361381305ce93 480 SUPERFAMILY SSF101960 35 477 1.15E-138 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily P40_09510 8e5cd748e966b491ef50a24f09551345 86 SUPERFAMILY SSF75169 1 84 9.81E-6 T 13-10-2018 IPR027396 DsrEFH-like P40_16680 2b22d60649e67757f78b64c888bd94b5 84 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 23 82 1.5E-12 T 13-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 P40_06665 e1c7cd0892dccf7acaddd69c5012afe5 529 SUPERFAMILY SSF51126 141 407 8.64E-8 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor P40_19765 75b70d139d4c4bcab40fd97637f63d3e 347 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 173 2.8E-30 T 13-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase P40_13990 c20d0a9653508c264ec83a187390c8b5 156 Pfam PF10722 Putative bacterial sensory transduction regulator 9 135 1.1E-11 T 13-10-2018 IPR019660 Putative sensory transduction regulator YbjN P40_18850 03aca6c7da26594536e76b785a640ffb 291 Gene3D G3DSA:1.10.3720.10 17 278 2.9E-53 T 13-10-2018 IPR035906 MetI-like superfamily P40_18850 03aca6c7da26594536e76b785a640ffb 291 SUPERFAMILY SSF161098 24 291 4.58E-63 T 13-10-2018 IPR035906 MetI-like superfamily P40_18850 03aca6c7da26594536e76b785a640ffb 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 285 1.2E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P40_12845 6033c3036932b53bc4cc3b7d9b4f35cd 163 SUPERFAMILY SSF88697 1 152 9.11E-54 T 13-10-2018 IPR015947 PUA-like superfamily P40_12845 6033c3036932b53bc4cc3b7d9b4f35cd 163 Gene3D G3DSA:3.10.590.10 1 155 5.7E-54 T 13-10-2018 P40_12845 6033c3036932b53bc4cc3b7d9b4f35cd 163 Pfam PF01878 EVE domain 3 149 1.3E-47 T 13-10-2018 IPR002740 EVE domain P40_14670 66295ee21adabe025f27884bfd0742c6 335 Pfam PF13280 WYL domain 157 331 6.4E-31 T 13-10-2018 IPR026881 WYL domain P40_12540 faf544dfe6b1e1fee1265e6d4ff85a66 87 Pfam PF14261 Domain of unknown function (DUF4351) 28 78 3.9E-7 T 13-10-2018 IPR025587 Domain of unknown function DUF4351 P40_12575 3d3fb8fa25e186b913f0d7d26693d65e 1149 Pfam PF13205 Bacterial Ig-like domain 42 141 3.0E-9 T 13-10-2018 IPR032812 SbsA, Ig-like domain P40_12575 3d3fb8fa25e186b913f0d7d26693d65e 1149 Pfam PF13205 Bacterial Ig-like domain 490 593 6.1E-10 T 13-10-2018 IPR032812 SbsA, Ig-like domain P40_01330 1d7cb9ee4fd6a47851dc77be43e28e48 1075 Pfam PF13205 Bacterial Ig-like domain 480 566 1.9E-10 T 13-10-2018 IPR032812 SbsA, Ig-like domain P40_20645 553b0f79af718e30ec2b82881af897e2 102 Gene3D G3DSA:1.10.287.700 46 101 6.1E-6 T 13-10-2018 P40_07565 6771a3c405fd194730bd85893b1f9740 313 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 268 2.2E-30 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_20915 37746cec1a94cfe46ac8f16240d00abb 452 Pfam PF11067 Protein of unknown function (DUF2868) 123 437 1.0E-76 T 13-10-2018 IPR021296 Protein of unknown function DUF2868 P40_11900 a3fecf1cc29e3510ed52ffd873611351 211 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 66 149 4.9E-5 T 13-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 P40_01655 095d8ee21cffa78ea6f8c1e4ce05a881 247 Pfam PF11445 Protein of unknown function (DUF2894) 14 244 4.1E-53 T 13-10-2018 IPR021549 Protein of unknown function DUF2894 P40_00790 467361d1a7cf08d6d9a11b6399b4c4df 592 SUPERFAMILY SSF53474 68 308 9.39E-18 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold P40_04745 42bd97adae09f957739eb6b75eea1b23 241 Pfam PF02104 SURF1 family 19 223 6.0E-40 T 13-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P40_14925 2987059d95b2380fa82e8375e1b01e8b 123 SUPERFAMILY SSF56349 22 122 6.47E-10 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 P40_01665 9a432af8216518bbb96de07c4c16d61e 839 Pfam PF05650 Domain of unknown function (DUF802) 393 445 3.2E-9 T 13-10-2018 IPR008520 Domain of unknown function DUF802 P40_01665 9a432af8216518bbb96de07c4c16d61e 839 Pfam PF05650 Domain of unknown function (DUF802) 320 372 1.2E-15 T 13-10-2018 IPR008520 Domain of unknown function DUF802 P40_01665 9a432af8216518bbb96de07c4c16d61e 839 Pfam PF05650 Domain of unknown function (DUF802) 539 590 3.7E-11 T 13-10-2018 IPR008520 Domain of unknown function DUF802 P40_01665 9a432af8216518bbb96de07c4c16d61e 839 Pfam PF05650 Domain of unknown function (DUF802) 466 518 8.8E-15 T 13-10-2018 IPR008520 Domain of unknown function DUF802 P40_12755 be1f75c9c6c7780f862a442787ed74ad 166 Pfam PF02674 Colicin V production protein 5 142 3.1E-35 T 13-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 P40_14005 ed837dafe9bc1c76bd4fbfc404f7a560 258 Pfam PF08907 Domain of unknown function (DUF1853) 23 204 5.8E-42 T 13-10-2018 IPR015003 Protein of unknown function DUF1853 P40_04970 2993b29b07ad21134c1a5ed21d32b083 493 Pfam PF03600 Citrate transporter 59 434 1.3E-54 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 P40_09780 2f97f42d9c0377881c05289b89a68a10 338 Pfam PF16169 Domain of unknown function (DUF4872) 167 331 1.8E-36 T 13-10-2018 IPR032369 Domain of unknown function DUF4872 P40_09780 2f97f42d9c0377881c05289b89a68a10 338 Pfam PF14399 Butirosin biosynthesis protein H, N-terminal 26 155 3.7E-37 T 13-10-2018 IPR026935 Butirosin biosynthesis protein H, N-terminal KEGG: 00524+2.3.2.19|MetaCyc: PWY-7019 P40_03200 9b715c1f6eec84cc0b36bbdf64e88248 178 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 178 1.7E-62 T 13-10-2018 IPR018636 Protein of unknown function DUF2058 P40_15295 7b6d5d686cfff08d79814722dd620da7 522 Pfam PF02538 Hydantoinase B/oxoprolinase 2 514 1.3E-181 T 13-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 P40_10200 485c58732a3e269466de476a849a04c1 126 Pfam PF03703 Bacterial PH domain 33 103 1.7E-10 T 13-10-2018 IPR005182 Domain of unknown function DUF304 P40_02410 06ab32069d3f11587983de57471b88a5 535 Pfam PF03929 PepSY-associated TM region 10 377 7.8E-64 T 13-10-2018 IPR005625 PepSY-associated TM protein P40_08915 645d31b30def5d8e5415f9ee6a3c60b2 321 Pfam PF01944 Stage II sporulation protein M 114 288 1.4E-32 T 13-10-2018 IPR002798 Stage II sporulation protein M-like P40_02425 abcd70791fecf63bb3f7f3c73e2b59ff 333 Pfam PF16220 Domain of unknown function (DUF4880) 24 66 3.6E-7 T 13-10-2018 IPR032623 FecR, N-terminal P40_02425 abcd70791fecf63bb3f7f3c73e2b59ff 333 PIRSF PIRSF018266 15 332 2.0E-56 T 13-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component P40_17880 6f3320e4527cda46aa761f2520fb6848 183 Pfam PF14341 PilX N-terminal 11 60 2.7E-7 T 13-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain P40_15155 92a6be0b8e6f21bf5384e72804839db4 1166 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 832 1165 8.0E-65 T 13-10-2018 IPR007452 Translocation and assembly module TamB P40_19210 d26637328e7166138f2faffa2901fe24 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 272 8.6E-37 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_12485 b849e07fab5c0948d62850fef7d95702 334 Pfam PF14261 Domain of unknown function (DUF4351) 274 327 1.0E-9 T 13-10-2018 IPR025587 Domain of unknown function DUF4351 P40_12485 b849e07fab5c0948d62850fef7d95702 334 Pfam PF04754 Putative transposase, YhgA-like 2 204 9.2E-32 T 13-10-2018 IPR006842 Transposase (putative), YhgA-like P40_00520 53cd186bf5482959f949322ad8856720 382 Pfam PF00487 Fatty acid desaturase 114 338 1.4E-27 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 P40_06435 74afde7309df61b34244d59ed3fa0d2e 105 SUPERFAMILY SSF64167 1 90 4.97E-5 T 13-10-2018 P40_06190 64f86fec41fdf524354e599494093e60 263 Pfam PF01925 Sulfite exporter TauE/SafE 8 258 5.5E-36 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 P40_02490 b8c032bb2d8a1c92823842dcfe4f7b48 179 Pfam PF07291 Methylamine utilisation protein MauE 3 166 3.1E-31 T 13-10-2018 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 P40_13580 4e23ae739a6bc4cda2f10c3d312de7a3 246 Pfam PF11306 Protein of unknown function (DUF3108) 27 242 2.0E-17 T 13-10-2018 IPR021457 Protein of unknown function DUF3108 P40_10150 19e9fa9990da76bc2243c13680f35499 164 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 16 152 1.8E-39 T 13-10-2018 IPR022262 Lipoprotein, putative P40_06635 54ecf21c40c18e20e0eb7455c582cdb3 105 Pfam PF06127 Protein of unknown function (DUF962) 9 102 4.5E-38 T 13-10-2018 IPR009305 Protein of unknown function DUF962 P40_17635 d85c11d55edc00338b7cfec008cb6235 124 Pfam PF10686 Protein of unknown function (DUF2493) 5 69 9.2E-15 T 13-10-2018 IPR019627 Mycobacteriophage D29, Gp61 P40_20585 280a1a90889374d8ea38c4f2fb2adc4b 359 Gene3D G3DSA:3.40.190.170 23 344 8.0E-53 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily P40_20585 280a1a90889374d8ea38c4f2fb2adc4b 359 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 299 7.2E-20 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 P40_19335 02f2c2b1fe55e8ae819bd7625be040ad 194 Pfam PF05137 Fimbrial assembly protein (PilN) 102 176 1.4E-20 T 13-10-2018 IPR007813 Fimbrial assembly PilN P40_00730 1095d5ffa3fe38142641268d5b1728b9 294 Pfam PF07285 Protein of unknown function (DUF1444) 95 283 8.2E-8 T 13-10-2018 IPR010838 Protein of unknown unction DUF1444 P40_13330 a0f6b635f08e628d5f4fe8c7b6205a33 536 Pfam PF03321 GH3 auxin-responsive promoter 22 515 3.7E-66 T 13-10-2018 IPR004993 GH3 family Reactome: R-HSA-6798695 P40_20240 8d9c9c819590a76a0af40fc9c825cdf4 239 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 41 236 1.5E-37 T 13-10-2018 IPR018635 Uncharacterised protein family UPF0319 P40_19910 3bdf4ef3ef8702db86efce9155c80f9c 556 Pfam PF03929 PepSY-associated TM region 10 394 2.0E-61 T 13-10-2018 IPR005625 PepSY-associated TM protein P40_07870 9d72211b1c1271d9b3ca8139c888d4f5 537 Pfam PF03929 PepSY-associated TM region 12 376 4.4E-55 T 13-10-2018 IPR005625 PepSY-associated TM protein P40_01905 b8d985ff47690e42533c493a5c28c4fc 183 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 159 3.4E-28 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_03100 8bd7ec980aa70e68b88bc91f2f8f7fef 149 Pfam PF06853 Protein of unknown function (DUF1249) 24 138 1.2E-35 T 13-10-2018 IPR009659 Protein of unknown function DUF1249 P40_02310 f08c974ceb22f740afc61327f7004608 124 Pfam PF03788 LrgA family 12 104 5.1E-22 T 13-10-2018 IPR005538 LrgA/CidA family GO:0016021 P40_20620 3c5d8e3f8543244ab14eaad4b1a1ce88 518 Pfam PF03929 PepSY-associated TM region 12 360 5.7E-55 T 13-10-2018 IPR005625 PepSY-associated TM protein P40_00725 8312077acc105bd8753e1316d2692f6b 121 Gene3D G3DSA:3.30.1360.200 14 113 3.7E-10 T 13-10-2018 P40_17430 3b8802d16f2e05006230c1bf22113409 129 Pfam PF03703 Bacterial PH domain 36 93 1.4E-9 T 13-10-2018 IPR005182 Domain of unknown function DUF304 P40_00465 af168c98eaceda404421b54ca2200a09 182 Pfam PF02325 YGGT family 110 178 1.1E-20 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 P40_00465 af168c98eaceda404421b54ca2200a09 182 Pfam PF02325 YGGT family 13 81 2.8E-17 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 P40_19355 21e584755d21e3143a0283da7b73a3cc 465 Pfam PF13644 DKNYY family 70 185 2.6E-9 T 13-10-2018 IPR027375 DKNYY family P40_19990 0ec036fbd7a4cd1fc7ce78e4ad11600b 242 Pfam PF05275 Copper resistance protein B precursor (CopB) 33 242 4.8E-89 T 13-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 P40_04525 c02b0fa2496a37629f71cd8834f81978 146 PIRSF PIRSF015875 1 146 1.2E-39 T 13-10-2018 IPR007418 Protein of unknown function DUF474 P40_10605 e1d7d453f461920428a2b1cb27a7e9ca 221 Pfam PF13503 Domain of unknown function (DUF4123) 4 56 2.0E-5 T 13-10-2018 IPR025391 Domain of unknown function DUF4123 P40_12150 773c62b6ed4faf3a0a963d4a46cf322a 102 Pfam PF09919 Uncharacterized conserved protein (DUF2149) 13 101 1.4E-26 T 13-10-2018 IPR018676 Protein of unknown function DUF2149 P40_08395 b8a1a198075d293d8eb27a243b6dbb07 101 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 5 97 1.5E-29 T 13-10-2018 IPR014056 Addiction module killer protein, predicted P40_08395 b8a1a198075d293d8eb27a243b6dbb07 101 PIRSF PIRSF028744 1 100 1.4E-30 T 13-10-2018 IPR014056 Addiction module killer protein, predicted P40_13320 e33e6a8d8c3fa69eccd69fd9741b241e 317 SUPERFAMILY SSF52777 79 300 1.67E-5 T 13-10-2018 P40_21230 139df588c5b3def2b9cf02eac0f5bbf2 186 Pfam PF03729 Short repeat of unknown function (DUF308) 79 147 1.0E-5 T 13-10-2018 IPR005325 Protein of unknown function DUF308, membrane P40_21230 139df588c5b3def2b9cf02eac0f5bbf2 186 Pfam PF03729 Short repeat of unknown function (DUF308) 23 91 3.1E-8 T 13-10-2018 IPR005325 Protein of unknown function DUF308, membrane P40_13885 4751b6e771e6d874275ffb78fb0ded2a 781 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 613 759 8.5E-12 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P40_07125 cb15c05742360262d28e44da1a60e367 125 Pfam PF16137 Domain of unknown function (DUF4845) 31 115 6.3E-29 T 13-10-2018 IPR032314 Protein of unknown function DUF4845 P40_02005 8072f2c4d36f548d4b33e949d65fdf7c 255 Pfam PF01925 Sulfite exporter TauE/SafE 11 245 6.1E-40 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 P40_11105 362c06abc9cedc6c335efd67705f1f6b 392 Pfam PF05762 VWA domain containing CoxE-like protein 186 273 5.2E-10 T 13-10-2018 IPR008912 Uncharacterised protein family CoxE-like P40_01690 f955c3a858d1f76d8089f6273c02f4c4 106 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 25 105 3.9E-13 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_09525 a68896e63af2aa8b0eb0a72c12ab752a 228 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 26 221 4.2E-35 T 13-10-2018 IPR006214 Bax inhibitor 1-related P40_03970 2af4c2c8591d02bae8033d0a583d0156 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 308 4.1E-44 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 P40_11180 545d8e3f14a9cd2fbb5f819231ea45fc 855 Pfam PF03993 Domain of Unknown Function (DUF349) 591 654 8.3E-7 T 13-10-2018 IPR007139 Protein of unknown function DUF349 P40_11180 545d8e3f14a9cd2fbb5f819231ea45fc 855 Pfam PF03993 Domain of Unknown Function (DUF349) 511 585 3.7E-13 T 13-10-2018 IPR007139 Protein of unknown function DUF349 P40_12270 29a8a25cb7641dbaed191a75db676297 84 Pfam PF14261 Domain of unknown function (DUF4351) 28 81 3.8E-8 T 13-10-2018 IPR025587 Domain of unknown function DUF4351 P40_03140 c340829f1a282f06aa8ec6672edae9db 171 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 154 4.0E-17 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ P40_09285 4570f78a8279cdb6f05b2530383fcf67 307 Pfam PF04018 Domain of unknown function (DUF368) 16 249 1.9E-78 T 13-10-2018 IPR007163 Protein of unknown function DUF368 P40_09830 57eba919bfd976d56ac4396557c3c254 1025 Pfam PF13205 Bacterial Ig-like domain 43 134 1.5E-7 T 13-10-2018 IPR032812 SbsA, Ig-like domain P40_02950 12fdf2532490f1aa6fd0755ff0ed929a 210 Pfam PF02036 SCP-2 sterol transfer family 19 116 2.7E-7 T 13-10-2018 IPR003033 SCP2 sterol-binding domain