AO498_00055 SM00644 AO498_00055 AO498_00100 SM01350 AO498_00100 AO498_00105 SM00382 ATPases associated with a variety of cellular activities AO498_00120 SM00322 K homology RNA-binding domain AO498_00120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AO498_00135 SM00873 B3/4 domain AO498_00135 SM00874 tRNA synthetase B5 domain AO498_00135 SM00896 Ferredoxin-fold anticodon binding domain AO498_00185 SM00382 ATPases associated with a variety of cellular activities AO498_00200 SM00448 cheY-homologous receiver domain AO498_00200 SM00850 LytTr DNA-binding domain AO498_00230 SM00382 ATPases associated with a variety of cellular activities AO498_00240 SM00448 cheY-homologous receiver domain AO498_00240 SM00862 Transcriptional regulatory protein, C terminal AO498_00245 SM00387 Histidine kinase-like ATPases AO498_00245 SM00388 His Kinase A (phosphoacceptor) domain AO498_00285 SM01011 Aminopeptidase P, N-terminal domain AO498_00300 SM00257 Lysin motif AO498_00315 SM00382 ATPases associated with a variety of cellular activities AO498_00320 SM00382 ATPases associated with a variety of cellular activities AO498_00330 SM00448 cheY-homologous receiver domain AO498_00335 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AO498_00335 SM00091 PAS domain AO498_00335 SM00387 Histidine kinase-like ATPases AO498_00350 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AO498_00350 SM00091 PAS domain AO498_00365 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AO498_00365 SM00245 tail specific protease AO498_00375 SM00732 Likely ribonuclease with RNase H fold. AO498_00400 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AO498_00405 SM00464 Found in ATP-dependent protease La (LON) AO498_00505 SM01321 AO498_00505 AO498_00520 SM00382 ATPases associated with a variety of cellular activities AO498_00530 SM00382 ATPases associated with a variety of cellular activities AO498_00540 SM00849 Metallo-beta-lactamase superfamily AO498_00635 SM00316 Ribosomal protein S1-like RNA-binding domain AO498_00635 SM00357 Cold shock protein domain AO498_00635 SM00955 AO498_00635 AO498_00700 SM00900 AO498_00700 AO498_00735 SM00387 Histidine kinase-like ATPases AO498_00745 SM00382 ATPases associated with a variety of cellular activities AO498_00755 SM00271 DnaJ molecular chaperone homology domain AO498_00820 SM00729 Elongator protein 3, MiaB family, Radical SAM AO498_00835 SM00487 DEAD-like helicases superfamily AO498_00835 SM00490 helicase superfamily c-terminal domain AO498_00865 SM00564 beta-propeller repeat AO498_00890 SM00226 Low molecular weight phosphatase family AO498_00930 SM00563 Phosphate acyltransferases AO498_01000 SM00493 AO498_01000 AO498_01015 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AO498_01070 SM00853 MutL C terminal dimerisation domain AO498_01070 SM01340 AO498_01070 AO498_01150 SM00631 AO498_01150 AO498_01155 SM00631 AO498_01155 AO498_01190 SM00612 AO498_01190 AO498_01400 SM00465 GIY-YIG type nucleases (URI domain) AO498_01445 SM00729 Elongator protein 3, MiaB family, Radical SAM AO498_01455 SM00331 Sigma factor PP2C-like phosphatases AO498_01485 SM00382 ATPases associated with a variety of cellular activities AO498_01490 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AO498_01510 SM01323 AO498_01510 AO498_01575 SM00935 Outer membrane protein (OmpH-like) AO498_01580 SM00935 Outer membrane protein (OmpH-like) AO498_01590 SM00363 S4 RNA-binding domain AO498_01605 SM01117 AO498_01605 AO498_01630 SM00014 Acid phosphatase homologues AO498_01655 SM00316 Ribosomal protein S1-like RNA-binding domain AO498_01670 SM00268 Actin AO498_01715 SM00357 Cold shock protein domain AO498_01715 SM00382 ATPases associated with a variety of cellular activities AO498_01715 SM00959 Rho termination factor, N-terminal domain AO498_01770 SM00363 S4 RNA-binding domain AO498_01785 SM00487 DEAD-like helicases superfamily AO498_01785 SM00490 helicase superfamily c-terminal domain AO498_01810 SM00062 Bacterial periplasmic substrate-binding proteins AO498_01855 SM00363 S4 RNA-binding domain AO498_01870 SM00710 Parallel beta-helix repeats AO498_01905 SM00316 Ribosomal protein S1-like RNA-binding domain AO498_01910 SM00028 Tetratricopeptide repeats AO498_01915 SM00411 bacterial (prokaryotic) histone like domain AO498_01920 SM00478 endonuclease III AO498_01930 SM00116 Domain in cystathionine beta-synthase and other proteins. AO498_01930 SM01091 Transporter associated domain AO498_01975 SM00116 Domain in cystathionine beta-synthase and other proteins. AO498_02045 SM01133 AO498_02045 AO498_02050 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AO498_02050 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AO498_02080 SM00562 AO498_02080 AO498_02130 SM00382 ATPases associated with a variety of cellular activities AO498_02145 SM00028 Tetratricopeptide repeats AO498_02230 SM01091 Transporter associated domain AO498_02265 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AO498_02305 SM00028 Tetratricopeptide repeats AO498_02335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AO498_02360 SM00861 Transketolase, pyrimidine binding domain AO498_02375 SM01005 Alanine racemase, C-terminal domain AO498_02515 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AO498_02550 SM01266 AO498_02550 AO498_02615 SM00829 Enoylreductase AO498_02630 SM00421 helix_turn_helix, Lux Regulon AO498_02630 SM00448 cheY-homologous receiver domain AO498_02650 SM00957 SecA DEAD-like domain AO498_02650 SM00958 SecA preprotein cross-linking domain AO498_02680 SM00421 helix_turn_helix, Lux Regulon AO498_02685 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AO498_02685 SM00534 ATPase domain of DNA mismatch repair MUTS family AO498_02705 SM00822 AO498_02705 AO498_02745 SM01228 AO498_02745 AO498_02765 SM00347 helix_turn_helix multiple antibiotic resistance protein AO498_02785 SM00387 Histidine kinase-like ATPases AO498_02785 SM00388 His Kinase A (phosphoacceptor) domain AO498_02790 SM00448 cheY-homologous receiver domain AO498_02800 SM00091 PAS domain AO498_02800 SM00387 Histidine kinase-like ATPases AO498_02825 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AO498_02850 SM00448 cheY-homologous receiver domain AO498_02850 SM00850 LytTr DNA-binding domain AO498_02880 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AO498_02885 SM00448 cheY-homologous receiver domain AO498_02885 SM00862 Transcriptional regulatory protein, C terminal AO498_02890 SM00387 Histidine kinase-like ATPases AO498_02890 SM00388 His Kinase A (phosphoacceptor) domain AO498_02905 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AO498_02925 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AO498_03015 SM00478 endonuclease III AO498_03015 SM00525 AO498_03015 AO498_03090 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AO498_03090 SM00474 3'-5' exonuclease AO498_03090 SM00475 5'-3' exonuclease AO498_03090 SM00482 DNA polymerase A domain AO498_03095 SM00382 ATPases associated with a variety of cellular activities AO498_03165 SM00422 helix_turn_helix, mercury resistance AO498_03200 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AO498_03200 SM00448 cheY-homologous receiver domain AO498_03205 SM00448 cheY-homologous receiver domain AO498_03210 SM00387 Histidine kinase-like ATPases AO498_03210 SM00388 His Kinase A (phosphoacceptor) domain AO498_03215 SM00448 cheY-homologous receiver domain AO498_03220 SM00387 Histidine kinase-like ATPases AO498_03220 SM00388 His Kinase A (phosphoacceptor) domain AO498_03230 SM00631 AO498_03230 AO498_03240 SM00347 helix_turn_helix multiple antibiotic resistance protein AO498_03295 SM00487 DEAD-like helicases superfamily AO498_03295 SM00490 helicase superfamily c-terminal domain AO498_03295 SM00982 AO498_03295 AO498_03295 SM01058 CarD-like/TRCF domain AO498_03315 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AO498_03360 SM00382 ATPases associated with a variety of cellular activities AO498_03390 SM00448 cheY-homologous receiver domain AO498_03390 SM00850 LytTr DNA-binding domain AO498_03395 SM00448 cheY-homologous receiver domain AO498_03395 SM00850 LytTr DNA-binding domain AO498_03400 SM00670 Large family of predicted nucleotide-binding domains AO498_03405 SM00487 DEAD-like helicases superfamily AO498_03405 SM00490 helicase superfamily c-terminal domain AO498_03435 SM00028 Tetratricopeptide repeats AO498_03440 SM00421 helix_turn_helix, Lux Regulon AO498_03440 SM00448 cheY-homologous receiver domain AO498_03460 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AO498_03555 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AO498_03615 SM00534 ATPase domain of DNA mismatch repair MUTS family AO498_03625 SM01001 AIR carboxylase AO498_03675 SM00421 helix_turn_helix, Lux Regulon AO498_03675 SM00448 cheY-homologous receiver domain AO498_03680 SM00387 Histidine kinase-like ATPases AO498_03750 SM00812 Alpha-L-fucosidase AO498_03775 SM00382 ATPases associated with a variety of cellular activities AO498_03790 SM00450 Rhodanese Homology Domain AO498_03810 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AO498_03840 SM00382 ATPases associated with a variety of cellular activities AO498_03850 SM00450 Rhodanese Homology Domain AO498_03850 SM00849 Metallo-beta-lactamase superfamily AO498_03900 SM00342 helix_turn_helix, arabinose operon control protein AO498_03965 SM00857 Resolvase, N terminal domain AO498_04020 SM00857 Resolvase, N terminal domain AO498_04030 SM00937 AO498_04030 AO498_04155 SM00487 DEAD-like helicases superfamily AO498_04155 SM00490 helicase superfamily c-terminal domain AO498_04175 SM00028 Tetratricopeptide repeats AO498_04200 SM00938 Nitrogen regulatory protein P-II AO498_04290 SM00342 helix_turn_helix, arabinose operon control protein AO498_04295 SM00060 Fibronectin type 3 domain AO498_04365 SM01130 AO498_04365 AO498_04370 SM00342 helix_turn_helix, arabinose operon control protein AO498_04415 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AO498_04415 SM01209 AO498_04415 AO498_04430 SM00859 Semialdehyde dehydrogenase, NAD binding domain AO498_04495 SM00116 Domain in cystathionine beta-synthase and other proteins. AO498_04495 SM01240 AO498_04495 AO498_04505 SM00843 AO498_04505 AO498_04570 SM00642 Alpha-amylase domain AO498_04575 SM00354 helix_turn _helix lactose operon repressor AO498_04580 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AO498_04585 SM00829 Enoylreductase AO498_04610 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AO498_04630 SM00479 AO498_04630 AO498_04635 SM00100 Cyclic nucleotide-monophosphate binding domain AO498_04635 SM00116 Domain in cystathionine beta-synthase and other proteins. AO498_04665 SM00382 ATPases associated with a variety of cellular activities AO498_04710 SM00420 helix_turn_helix, Deoxyribose operon repressor AO498_04710 SM01134 AO498_04710 AO498_04715 SM00855 Phosphoglycerate mutase family AO498_04795 SM00740 AO498_04795 AO498_04835 SM00842 Cell division protein FtsA AO498_04840 SM00864 Tubulin/FtsZ family, GTPase domain AO498_04840 SM00865 Tubulin/FtsZ family, C-terminal domain AO498_04975 SM00191 Integrin alpha (beta-propellor repeats). AO498_04995 SM00072 Guanylate kinase homologues. AO498_05080 SM01321 AO498_05080 AO498_05095 SM00642 Alpha-amylase domain AO498_05100 SM00641 Glycosyl hydrolases family 25 AO498_05135 SM00480 DNA polymerase III beta subunit AO498_05150 SM00382 ATPases associated with a variety of cellular activities AO498_05200 SM00028 Tetratricopeptide repeats AO498_05200 SM00387 Histidine kinase-like ATPases AO498_05215 SM00564 beta-propeller repeat AO498_05240 SM00932 Scaffold protein Nfu/NifU N terminal AO498_05280 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AO498_05340 SM00861 Transketolase, pyrimidine binding domain AO498_05405 SM00382 ATPases associated with a variety of cellular activities AO498_05405 SM01086 C-terminal, D2-small domain, of ClpB protein AO498_05465 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AO498_05465 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AO498_05470 SM00649 Ribosomal protein L11/L12 AO498_05495 SM00663 RNA polymerase I subunit A N-terminus AO498_05515 SM00838 Elongation factor G C-terminus AO498_05515 SM00889 Elongation factor G, domain IV AO498_05520 SM01403 AO498_05520 AO498_05540 SM01382 AO498_05540 AO498_05540 SM01383 AO498_05540 AO498_05555 SM00322 K homology RNA-binding domain AO498_05575 SM01374 AO498_05575 AO498_05580 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AO498_05635 SM00316 Ribosomal protein S1-like RNA-binding domain AO498_05650 SM00363 S4 RNA-binding domain AO498_05650 SM01390 AO498_05650 AO498_05655 SM00662 RNA polymerases D AO498_05665 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AO498_05670 SM01192 AO498_05670 AO498_05670 SM01193 AO498_05670 AO498_05735 SM00100 Cyclic nucleotide-monophosphate binding domain AO498_05740 SM00977 TilS substrate C-terminal domain AO498_05760 SM01409 AO498_05760 AO498_05810 SM00347 helix_turn_helix multiple antibiotic resistance protein AO498_05815 SM00867 YceI-like domain AO498_05870 SM00530 Helix-turn-helix XRE-family like proteins AO498_05915 SM00448 cheY-homologous receiver domain AO498_05915 SM00862 Transcriptional regulatory protein, C terminal AO498_05920 SM00387 Histidine kinase-like ATPases AO498_05920 SM00388 His Kinase A (phosphoacceptor) domain AO498_05965 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AO498_05995 SM00450 Rhodanese Homology Domain AO498_06010 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AO498_06060 SM00633 Glycosyl hydrolase family 10 AO498_06085 SM00881 CoA binding domain AO498_06090 SM00091 PAS domain AO498_06090 SM00387 Histidine kinase-like ATPases AO498_06090 SM00388 His Kinase A (phosphoacceptor) domain AO498_06095 SM00387 Histidine kinase-like ATPases AO498_06095 SM00388 His Kinase A (phosphoacceptor) domain AO498_06095 SM00448 cheY-homologous receiver domain AO498_06100 SM00382 ATPases associated with a variety of cellular activities AO498_06150 SM00382 ATPases associated with a variety of cellular activities AO498_06150 SM00760 Bacterial dnaA protein helix-turn-helix domain AO498_06215 SM00347 helix_turn_helix multiple antibiotic resistance protein AO498_06305 SM00382 ATPases associated with a variety of cellular activities AO498_06305 SM01086 C-terminal, D2-small domain, of ClpB protein AO498_06320 SM00849 Metallo-beta-lactamase superfamily AO498_06320 SM01027 Beta-Casp domain AO498_06390 SM00507 HNH nucleases AO498_06400 SM00382 ATPases associated with a variety of cellular activities AO498_06420 SM00382 ATPases associated with a variety of cellular activities AO498_06420 SM00962 SRP54-type protein, GTPase domain AO498_06420 SM00963 SRP54-type protein, helical bundle domain AO498_06430 SM00448 cheY-homologous receiver domain AO498_06430 SM00850 LytTr DNA-binding domain AO498_06445 SM00861 Transketolase, pyrimidine binding domain AO498_06455 SM00450 Rhodanese Homology Domain AO498_06490 SM00028 Tetratricopeptide repeats AO498_06505 SM00191 Integrin alpha (beta-propellor repeats). AO498_06530 SM00116 Domain in cystathionine beta-synthase and other proteins. AO498_06550 SM01400 AO498_06550 AO498_06555 SM00631 AO498_06555 AO498_06615 SM00986 Uracil DNA glycosylase superfamily AO498_06615 SM00987 UreE urease accessory protein, C-terminal domain AO498_06635 SM00470 ParB-like nuclease domain AO498_06670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AO498_06675 SM00028 Tetratricopeptide repeats AO498_06690 SM00245 tail specific protease AO498_06695 SM00382 ATPases associated with a variety of cellular activities AO498_06740 SM00028 Tetratricopeptide repeats AO498_06740 SM00387 Histidine kinase-like ATPases AO498_06755 SM00530 Helix-turn-helix XRE-family like proteins AO498_06920 SM00946 Prolyl-tRNA synthetase, C-terminal AO498_06955 SM00100 Cyclic nucleotide-monophosphate binding domain AO498_06955 SM00419 helix_turn_helix, cAMP Regulatory protein AO498_06960 SM00450 Rhodanese Homology Domain AO498_07040 SM00382 ATPases associated with a variety of cellular activities AO498_07050 SM01235 AO498_07050 AO498_07055 SM01235 AO498_07055 AO498_07105 SM00382 ATPases associated with a variety of cellular activities AO498_07145 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AO498_07160 SM00387 Histidine kinase-like ATPases AO498_07160 SM00388 His Kinase A (phosphoacceptor) domain AO498_07165 SM00382 ATPases associated with a variety of cellular activities AO498_07165 SM00464 Found in ATP-dependent protease La (LON) AO498_07170 SM00382 ATPases associated with a variety of cellular activities AO498_07170 SM01086 C-terminal, D2-small domain, of ClpB protein AO498_07180 SM00855 Phosphoglycerate mutase family AO498_07185 SM00357 Cold shock protein domain AO498_07195 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AO498_07205 SM00387 Histidine kinase-like ATPases AO498_07205 SM00388 His Kinase A (phosphoacceptor) domain AO498_07230 SM00028 Tetratricopeptide repeats AO498_07260 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AO498_07260 SM00091 PAS domain AO498_07260 SM00387 Histidine kinase-like ATPases AO498_07260 SM00388 His Kinase A (phosphoacceptor) domain AO498_07280 SM00530 Helix-turn-helix XRE-family like proteins AO498_07305 SM00387 Histidine kinase-like ATPases AO498_07305 SM00388 His Kinase A (phosphoacceptor) domain AO498_07330 SM01211 AO498_07330 AO498_07355 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AO498_07375 SM01130 AO498_07375 AO498_07390 SM00292 breast cancer carboxy-terminal domain AO498_07390 SM00532 Ligase N family AO498_07430 SM00460 Transglutaminase/protease-like homologues AO498_07460 SM00448 cheY-homologous receiver domain AO498_07460 SM00862 Transcriptional regulatory protein, C terminal AO498_07465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AO498_07465 SM00387 Histidine kinase-like ATPases AO498_07465 SM00388 His Kinase A (phosphoacceptor) domain AO498_07550 SM01321 AO498_07550 AO498_07625 SM00830 Chorismate mutase type II AO498_07660 SM00646 AO498_07660 AO498_07685 SM00320 WD40 repeats AO498_07695 SM00905 Dihydroneopterin aldolase AO498_07775 SM00245 tail specific protease AO498_07780 SM00886 Stress responsive A/B Barrel Domain AO498_07790 SM00838 Elongation factor G C-terminus AO498_07850 SM00342 helix_turn_helix, arabinose operon control protein AO498_07890 SM00419 helix_turn_helix, cAMP Regulatory protein AO498_07965 SM00382 ATPases associated with a variety of cellular activities AO498_07965 SM00994 ClpX C4-type zinc finger AO498_07965 SM01086 C-terminal, D2-small domain, of ClpB protein AO498_07985 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AO498_07985 SM00954 Region found in RelA / SpoT proteins AO498_08000 SM00788 Adenylosuccinate synthetase AO498_08005 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AO498_08075 SM00729 Elongator protein 3, MiaB family, Radical SAM AO498_08085 SM00327 von Willebrand factor (vWF) type A domain AO498_08095 SM00327 von Willebrand factor (vWF) type A domain AO498_08105 SM00463 Small MutS-related domain AO498_08105 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AO498_08105 SM00534 ATPase domain of DNA mismatch repair MUTS family AO498_08115 SM00382 ATPases associated with a variety of cellular activities AO498_08135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AO498_08140 SM00448 cheY-homologous receiver domain AO498_08150 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AO498_08150 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AO498_08155 SM00448 cheY-homologous receiver domain AO498_08170 SM00387 Histidine kinase-like ATPases AO498_08170 SM00388 His Kinase A (phosphoacceptor) domain AO498_08175 SM00387 Histidine kinase-like ATPases AO498_08175 SM00388 His Kinase A (phosphoacceptor) domain AO498_08175 SM00448 cheY-homologous receiver domain AO498_08195 SM00382 ATPases associated with a variety of cellular activities AO498_08200 SM00487 DEAD-like helicases superfamily AO498_08200 SM00490 helicase superfamily c-terminal domain AO498_08215 SM00822 AO498_08215 AO498_08300 SM00729 Elongator protein 3, MiaB family, Radical SAM AO498_08315 SM00831 Cation transporter/ATPase, N-terminus AO498_08365 SM00028 Tetratricopeptide repeats AO498_08365 SM00387 Histidine kinase-like ATPases AO498_08365 SM00388 His Kinase A (phosphoacceptor) domain AO498_08385 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AO498_08400 SM01217 AO498_08400 AO498_08415 SM00028 Tetratricopeptide repeats AO498_08415 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AO498_08480 SM00382 ATPases associated with a variety of cellular activities AO498_08505 SM00382 ATPases associated with a variety of cellular activities AO498_08555 SM01209 AO498_08555 AO498_08555 SM01210 AO498_08555 AO498_08560 SM00341 Helicase and RNase D C-terminal AO498_08560 SM00487 DEAD-like helicases superfamily AO498_08560 SM00490 helicase superfamily c-terminal domain AO498_08560 SM00956 AO498_08560 AO498_08565 SM00116 Domain in cystathionine beta-synthase and other proteins. AO498_08575 SM00967 RNA 2'-O ribose methyltransferase substrate binding AO498_08600 SM00450 Rhodanese Homology Domain AO498_08600 SM00849 Metallo-beta-lactamase superfamily AO498_08645 SM00487 DEAD-like helicases superfamily AO498_08645 SM00490 helicase superfamily c-terminal domain AO498_08655 SM00357 Cold shock protein domain AO498_08670 SM00886 Stress responsive A/B Barrel Domain AO498_08685 SM00448 cheY-homologous receiver domain AO498_08690 SM00448 cheY-homologous receiver domain AO498_08695 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AO498_08695 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AO498_08695 SM00091 PAS domain AO498_08695 SM00387 Histidine kinase-like ATPases AO498_08695 SM00388 His Kinase A (phosphoacceptor) domain AO498_08695 SM00448 cheY-homologous receiver domain AO498_08700 SM00138 Methyltransferase, chemotaxis proteins AO498_08700 SM00387 Histidine kinase-like ATPases AO498_08700 SM00388 His Kinase A (phosphoacceptor) domain AO498_08700 SM00448 cheY-homologous receiver domain AO498_08715 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AO498_08715 SM00606 Cellulose Binding Domain Type IV AO498_08730 SM00387 Histidine kinase-like ATPases AO498_08735 SM00382 ATPases associated with a variety of cellular activities AO498_08735 SM00448 cheY-homologous receiver domain AO498_08755 SM00382 ATPases associated with a variety of cellular activities AO498_08810 SM00382 ATPases associated with a variety of cellular activities AO498_08830 SM00487 DEAD-like helicases superfamily AO498_08830 SM00490 helicase superfamily c-terminal domain AO498_08860 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AO498_08905 SM00342 helix_turn_helix, arabinose operon control protein AO498_08910 SM00729 Elongator protein 3, MiaB family, Radical SAM AO498_08915 SM00852 Probable molybdopterin binding domain AO498_08965 SM00316 Ribosomal protein S1-like RNA-binding domain AO498_08965 SM00732 Likely ribonuclease with RNase H fold. AO498_08980 SM00530 Helix-turn-helix XRE-family like proteins AO498_08995 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AO498_09055 SM00855 Phosphoglycerate mutase family AO498_09120 SM00245 tail specific protease AO498_09135 SM00642 Alpha-amylase domain AO498_09140 SM00729 Elongator protein 3, MiaB family, Radical SAM AO498_09145 SM01230 AO498_09145 AO498_09185 SM00448 cheY-homologous receiver domain AO498_09195 SM00883 Chaperonin 10 Kd subunit AO498_09225 SM00382 ATPases associated with a variety of cellular activities AO498_09230 SM00729 Elongator protein 3, MiaB family, Radical SAM AO498_09240 SM00867 YceI-like domain AO498_09320 SM00382 ATPases associated with a variety of cellular activities AO498_09330 SM00387 Histidine kinase-like ATPases AO498_09330 SM00388 His Kinase A (phosphoacceptor) domain AO498_09335 SM00448 cheY-homologous receiver domain AO498_09335 SM00850 LytTr DNA-binding domain AO498_09340 SM00448 cheY-homologous receiver domain AO498_09425 SM00878 Biotin carboxylase C-terminal domain AO498_09435 SM00841 Elongation factor P, C-terminal AO498_09435 SM01185 AO498_09435 AO498_09455 SM00650 Ribosomal RNA adenine dimethylases AO498_09460 SM00116 Domain in cystathionine beta-synthase and other proteins. AO498_09460 SM00924 MgtE intracellular N domain AO498_09510 SM00487 DEAD-like helicases superfamily AO498_09510 SM00490 helicase superfamily c-terminal domain AO498_09540 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AO498_09550 SM00382 ATPases associated with a variety of cellular activities AO498_09570 SM00529 Helix-turn-helix diphteria tox regulatory element AO498_09680 SM00382 ATPases associated with a variety of cellular activities AO498_09690 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AO498_09695 SM00845 GatB domain AO498_09720 SM00631 AO498_09720 AO498_09780 SM00245 tail specific protease AO498_09790 SM00861 Transketolase, pyrimidine binding domain AO498_09880 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AO498_09880 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AO498_09885 SM00861 Transketolase, pyrimidine binding domain AO498_09900 SM00382 ATPases associated with a variety of cellular activities AO498_09900 SM00448 cheY-homologous receiver domain AO498_09940 SM00836 DALR anticodon binding domain AO498_09940 SM01016 Arginyl tRNA synthetase N terminal dom AO498_09990 SM00354 helix_turn _helix lactose operon repressor AO498_10015 SM00981 AO498_10015 AO498_10060 SM00448 cheY-homologous receiver domain AO498_10155 SM00342 helix_turn_helix, arabinose operon control protein AO498_10160 SM00342 helix_turn_helix, arabinose operon control protein AO498_10200 SM00327 von Willebrand factor (vWF) type A domain AO498_10245 SM00530 Helix-turn-helix XRE-family like proteins AO498_10300 SM00382 ATPases associated with a variety of cellular activities AO498_10330 SM00858 AO498_10330 AO498_10390 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AO498_10405 SM00567 E-Z type HEAT repeats AO498_10495 SM00434 DNA Topoisomerase IV AO498_10500 SM00028 Tetratricopeptide repeats AO498_10535 SM00028 Tetratricopeptide repeats AO498_10545 SM00028 Tetratricopeptide repeats AO498_10605 SM00829 Enoylreductase AO498_10675 SM00935 Outer membrane protein (OmpH-like) AO498_10725 SM00448 cheY-homologous receiver domain AO498_10780 SM00448 cheY-homologous receiver domain AO498_10785 SM00387 Histidine kinase-like ATPases AO498_10785 SM00388 His Kinase A (phosphoacceptor) domain AO498_10815 SM00421 helix_turn_helix, Lux Regulon AO498_10815 SM00448 cheY-homologous receiver domain AO498_10820 SM00387 Histidine kinase-like ATPases AO498_10865 SM00968 SMC proteins Flexible Hinge Domain AO498_10880 SM00867 YceI-like domain AO498_10895 SM01321 AO498_10895 AO498_10945 SM00487 DEAD-like helicases superfamily AO498_10945 SM00490 helicase superfamily c-terminal domain AO498_10945 SM00847 Helicase associated domain (HA2) Add an annotation AO498_10950 SM00479 AO498_10950 AO498_10970 SM00829 Enoylreductase AO498_10985 SM00893 Electron transfer flavoprotein domain AO498_10990 SM00893 Electron transfer flavoprotein domain AO498_11065 SM00563 Phosphate acyltransferases AO498_11155 SM00859 Semialdehyde dehydrogenase, NAD binding domain AO498_11190 SM00797 Allophanate hydrolase subunit 2 AO498_11195 SM00796 Allophanate hydrolase subunit 1 AO498_11245 SM00448 cheY-homologous receiver domain AO498_11245 SM00850 LytTr DNA-binding domain AO498_11285 SM00316 Ribosomal protein S1-like RNA-binding domain AO498_11315 SM00387 Histidine kinase-like ATPases AO498_11315 SM00433 TopoisomeraseII AO498_11320 SM00434 DNA Topoisomerase IV AO498_11360 SM00882 Coenzyme A transferase AO498_11365 SM00882 Coenzyme A transferase AO498_11370 SM00904 Riboflavin kinase AO498_11410 SM00487 DEAD-like helicases superfamily AO498_11410 SM00490 helicase superfamily c-terminal domain AO498_11450 SM00878 Biotin carboxylase C-terminal domain AO498_11465 SM00382 ATPases associated with a variety of cellular activities AO498_11505 SM00640 Glycosyl hydrolases family 32 AO498_11515 SM00342 helix_turn_helix, arabinose operon control protein AO498_11570 SM00487 DEAD-like helicases superfamily AO498_11570 SM00490 helicase superfamily c-terminal domain AO498_11590 SM00487 DEAD-like helicases superfamily AO498_11600 SM00382 ATPases associated with a variety of cellular activities AO498_11680 SM00529 Helix-turn-helix diphteria tox regulatory element AO498_11685 SM00382 ATPases associated with a variety of cellular activities AO498_11695 SM00529 Helix-turn-helix diphteria tox regulatory element AO498_11695 SM00899 AO498_11695 AO498_11710 SM00028 Tetratricopeptide repeats AO498_11815 SM00448 cheY-homologous receiver domain AO498_11815 SM00850 LytTr DNA-binding domain AO498_11820 SM00342 helix_turn_helix, arabinose operon control protein AO498_11855 SM00636 AO498_11855 AO498_11860 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AO498_11890 SM00257 Lysin motif AO498_11905 SM00316 Ribosomal protein S1-like RNA-binding domain AO498_11905 SM00322 K homology RNA-binding domain AO498_11910 SM01387 AO498_11910 AO498_11955 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AO498_12015 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AO498_12105 SM00563 Phosphate acyltransferases AO498_12115 SM00849 Metallo-beta-lactamase superfamily AO498_12140 SM00487 DEAD-like helicases superfamily AO498_12140 SM00490 helicase superfamily c-terminal domain AO498_12150 SM00422 helix_turn_helix, mercury resistance AO498_12180 SM01018 B12 binding domain AO498_12195 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AO498_12195 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AO498_12195 SM00091 PAS domain AO498_12195 SM00387 Histidine kinase-like ATPases AO498_12195 SM00388 His Kinase A (phosphoacceptor) domain AO498_12195 SM00448 cheY-homologous receiver domain AO498_12255 SM00257 Lysin motif AO498_12270 SM00563 Phosphate acyltransferases AO498_12285 SM00382 ATPases associated with a variety of cellular activities AO498_12305 SM00937 AO498_12305 AO498_12330 SM00344 helix_turn_helix ASNC type AO498_12355 SM00450 Rhodanese Homology Domain AO498_12380 SM00419 helix_turn_helix, cAMP Regulatory protein AO498_12400 SM00899 AO498_12400 AO498_12450 SM00851 MGS-like domain AO498_12460 SM00642 Alpha-amylase domain AO498_12470 SM00642 Alpha-amylase domain AO498_12480 SM00354 helix_turn _helix lactose operon repressor AO498_12500 SM00028 Tetratricopeptide repeats AO498_12500 SM00387 Histidine kinase-like ATPases AO498_12500 SM00388 His Kinase A (phosphoacceptor) domain AO498_12520 SM00400 zinc finger AO498_12520 SM00493 AO498_12520 AO498_12540 SM00740 AO498_12540 AO498_12550 SM00450 Rhodanese Homology Domain AO498_12675 SM00028 Tetratricopeptide repeats AO498_12695 SM00382 ATPases associated with a variety of cellular activities AO498_12720 SM00387 Histidine kinase-like ATPases AO498_12720 SM00433 TopoisomeraseII AO498_12725 SM01021 Bacteriorhodopsin-like protein AO498_12750 SM00563 Phosphate acyltransferases AO498_12820 SM00028 Tetratricopeptide repeats AO498_12860 SM00822 AO498_12860 AO498_12865 SM00852 Probable molybdopterin binding domain AO498_12875 SM00091 PAS domain AO498_12875 SM00387 Histidine kinase-like ATPases AO498_12875 SM00388 His Kinase A (phosphoacceptor) domain AO498_12875 SM00448 cheY-homologous receiver domain AO498_12910 SM00855 Phosphoglycerate mutase family AO498_12915 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AO498_12915 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AO498_12915 SM00493 AO498_12915 AO498_12970 SM00465 GIY-YIG type nucleases (URI domain) AO498_12970 SM00479 AO498_12970 AO498_13010 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AO498_13010 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AO498_13010 SM00091 PAS domain AO498_13010 SM00387 Histidine kinase-like ATPases AO498_13010 SM00388 His Kinase A (phosphoacceptor) domain AO498_13015 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AO498_13015 SM00091 PAS domain AO498_13015 SM00387 Histidine kinase-like ATPases AO498_13015 SM00388 His Kinase A (phosphoacceptor) domain AO498_13015 SM01079 AO498_13015 AO498_13020 SM00091 PAS domain AO498_13020 SM00448 cheY-homologous receiver domain AO498_13025 SM00448 cheY-homologous receiver domain AO498_13145 SM00448 cheY-homologous receiver domain AO498_13150 SM00448 cheY-homologous receiver domain AO498_13175 SM00448 cheY-homologous receiver domain AO498_13175 SM00850 LytTr DNA-binding domain AO498_13185 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AO498_13205 SM00825 Beta-ketoacyl synthase AO498_13210 SM00358 Double-stranded RNA binding motif AO498_13210 SM00535 Ribonuclease III family AO498_13225 SM01234 AO498_13225 AO498_13260 SM00028 Tetratricopeptide repeats AO498_13265 SM00387 Histidine kinase-like ATPases AO498_13265 SM00388 His Kinase A (phosphoacceptor) domain AO498_13265 SM00448 cheY-homologous receiver domain AO498_13290 SM00387 Histidine kinase-like ATPases AO498_13305 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. AO498_13330 SM00382 ATPases associated with a variety of cellular activities AO498_13450 SM00448 cheY-homologous receiver domain AO498_13450 SM00862 Transcriptional regulatory protein, C terminal AO498_13455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AO498_13455 SM00387 Histidine kinase-like ATPases AO498_13455 SM00388 His Kinase A (phosphoacceptor) domain AO498_13515 SM01259 AO498_13515 AO498_13850 SM00858 AO498_13850 AO498_13870 SM00984 UDP binding domain AO498_13950 SM00636 AO498_13950 AO498_13975 SM00858 AO498_13975 AO498_13985 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AO498_14070 SM00382 ATPases associated with a variety of cellular activities AO498_14090 SM00984 UDP binding domain AO498_14160 SM00984 UDP binding domain AO498_14210 SM00631 AO498_14210 AO498_14220 SM00344 helix_turn_helix ASNC type AO498_14230 SM00382 ATPases associated with a variety of cellular activities AO498_14290 SM00014 Acid phosphatase homologues AO498_14300 SM00460 Transglutaminase/protease-like homologues AO498_14310 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AO498_14310 SM00091 PAS domain AO498_14310 SM00387 Histidine kinase-like ATPases AO498_14310 SM00388 His Kinase A (phosphoacceptor) domain AO498_14325 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AO498_14335 SM00850 LytTr DNA-binding domain AO498_14355 SM00382 ATPases associated with a variety of cellular activities AO498_14365 SM00448 cheY-homologous receiver domain AO498_14410 SM00530 Helix-turn-helix XRE-family like proteins AO498_14420 SM00822 AO498_14420 AO498_14435 SM00382 ATPases associated with a variety of cellular activities AO498_14545 SM00481 DNA polymerase alpha chain like domain AO498_14615 SM01329 AO498_14615 AO498_14630 SM00028 Tetratricopeptide repeats AO498_14655 SM00257 Lysin motif AO498_14665 SM00919 Malic enzyme, NAD binding domain AO498_14665 SM01274 AO498_14665 AO498_14670 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AO498_14715 SM00849 Metallo-beta-lactamase superfamily AO498_14760 SM00474 3'-5' exonuclease AO498_14810 SM00996 S-adenosyl-L-homocysteine hydrolase AO498_14810 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AO498_14825 SM00382 ATPases associated with a variety of cellular activities AO498_14845 SM00382 ATPases associated with a variety of cellular activities AO498_14845 SM00448 cheY-homologous receiver domain AO498_14850 SM00387 Histidine kinase-like ATPases AO498_14935 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AO498_14935 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AO498_14955 SM00829 Enoylreductase AO498_14975 SM01235 AO498_14975 AO498_15020 SM00798 AICARFT/IMPCHase bienzyme AO498_15020 SM00851 MGS-like domain AO498_15025 SM00840 AO498_15025 AO498_15035 SM00354 helix_turn _helix lactose operon repressor AO498_15080 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AO498_15130 SM01007 Class II Aldolase and Adducin N-terminal domain AO498_15135 SM00345 helix_turn_helix gluconate operon transcriptional repressor AO498_15160 SM00387 Histidine kinase-like ATPases AO498_15160 SM00388 His Kinase A (phosphoacceptor) domain AO498_15165 SM00387 Histidine kinase-like ATPases AO498_15165 SM00388 His Kinase A (phosphoacceptor) domain AO498_15215 SM00387 Histidine kinase-like ATPases AO498_15215 SM00388 His Kinase A (phosphoacceptor) domain AO498_15315 SM00316 Ribosomal protein S1-like RNA-binding domain AO498_15325 SM00563 Phosphate acyltransferases AO498_15335 SM00116 Domain in cystathionine beta-synthase and other proteins. AO498_15345 SM00382 ATPases associated with a variety of cellular activities AO498_15375 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AO498_15375 SM00481 DNA polymerase alpha chain like domain AO498_15470 SM00318 Staphylococcal nuclease homologues AO498_15475 SM00138 Methyltransferase, chemotaxis proteins AO498_15475 SM00387 Histidine kinase-like ATPases AO498_15475 SM00388 His Kinase A (phosphoacceptor) domain AO498_15570 SM00320 WD40 repeats AO498_15570 SM00547 Zinc finger domain AO498_15585 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AO498_15630 SM00852 Probable molybdopterin binding domain AO498_15675 SM00867 YceI-like domain AO498_15705 SM01130 AO498_15705 AO498_15735 SM00450 Rhodanese Homology Domain AO498_15820 SM00530 Helix-turn-helix XRE-family like proteins AO498_15835 SM00091 PAS domain AO498_15850 SM01321 AO498_15850 AO498_15865 SM00849 Metallo-beta-lactamase superfamily AO498_16045 SM00870 AO498_16045 AO498_16065 SM00331 Sigma factor PP2C-like phosphatases AO498_16095 SM00710 Parallel beta-helix repeats AO498_16155 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AO498_16170 SM00903 Flavin reductase like domain AO498_16185 SM00387 Histidine kinase-like ATPases AO498_16185 SM00388 His Kinase A (phosphoacceptor) domain AO498_16190 SM00448 cheY-homologous receiver domain AO498_16190 SM00862 Transcriptional regulatory protein, C terminal AO498_16215 SM00028 Tetratricopeptide repeats AO498_16235 SM00487 DEAD-like helicases superfamily AO498_16235 SM00490 helicase superfamily c-terminal domain AO498_16295 SM00382 ATPases associated with a variety of cellular activities AO498_16345 SM00448 cheY-homologous receiver domain AO498_16400 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AO498_16415 SM00822 AO498_16415 AO498_16445 SM00382 ATPases associated with a variety of cellular activities AO498_16495 SM00382 ATPases associated with a variety of cellular activities AO498_16535 SM00883 Chaperonin 10 Kd subunit AO498_16555 SM01004 Delta-aminolevulinic acid dehydratase AO498_16585 SM00382 ATPases associated with a variety of cellular activities AO498_16585 SM00962 SRP54-type protein, GTPase domain AO498_16585 SM00963 SRP54-type protein, helical bundle domain AO498_16587 SM00244 prohibitin homologues AO498_16680 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AO498_16680 SM00245 tail specific protease AO498_16740 SM00342 helix_turn_helix, arabinose operon control protein AO498_16745 SM00729 Elongator protein 3, MiaB family, Radical SAM AO498_16750 SM00861 Transketolase, pyrimidine binding domain AO498_16795 SM01329 AO498_16795 AO498_16800 SM00917 LeuA allosteric (dimerisation) domain AO498_16815 SM00917 LeuA allosteric (dimerisation) domain AO498_16885 SM00479 AO498_16885 AO498_16885 SM00481 DNA polymerase alpha chain like domain AO498_16895 SM00450 Rhodanese Homology Domain