locus-tag class description HOO31_00005 PF00308 Bacterial dnaA protein HOO31_00005 PF08299 Bacterial dnaA protein helix-turn-helix HOO31_00005 PF11638 DnaA N-terminal domain HOO31_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HOO31_00010 PF02767 DNA polymerase III beta subunit, central domain HOO31_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HOO31_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_00015 PF01751 Toprim domain HOO31_00015 PF00204 DNA gyrase B HOO31_00015 PF00986 DNA gyrase B subunit, carboxyl terminus HOO31_00020 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO31_00025 PF14489 QueF-like protein HOO31_00045 PF13649 Methyltransferase domain HOO31_00050 PF00005 ABC transporter HOO31_00050 PF08402 TOBE domain HOO31_00055 PF00528 Binding-protein-dependent transport system inner membrane component HOO31_00070 PF03459 TOBE domain HOO31_00070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO31_00080 PF03466 LysR substrate binding domain HOO31_00080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO31_00100 PF00529 HlyD membrane-fusion protein of T1SS HOO31_00100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO31_00105 PF00873 AcrB/AcrD/AcrF family HOO31_00110 PF02321 Outer membrane efflux protein HOO31_00115 PF00672 HAMP domain HOO31_00115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_00115 PF02203 Tar ligand binding domain homologue HOO31_00120 PF02203 Tar ligand binding domain homologue HOO31_00120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_00120 PF00672 HAMP domain HOO31_00135 PF00293 NUDIX domain HOO31_00145 PF01053 Cys/Met metabolism PLP-dependent enzyme HOO31_00150 PF02082 Transcriptional regulator HOO31_00155 PF00291 Pyridoxal-phosphate dependent enzyme HOO31_00165 PF01507 Phosphoadenosine phosphosulfate reductase family HOO31_00170 PF01507 Phosphoadenosine phosphosulfate reductase family HOO31_00175 PF00009 Elongation factor Tu GTP binding domain HOO31_00185 PF07690 Major Facilitator Superfamily HOO31_00190 PF00210 Ferritin-like domain HOO31_00195 PF13419 Haloacid dehalogenase-like hydrolase HOO31_00200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HOO31_00200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HOO31_00200 PF00205 Thiamine pyrophosphate enzyme, central domain HOO31_00205 PF00171 Aldehyde dehydrogenase family HOO31_00210 PF03167 Uracil DNA glycosylase superfamily HOO31_00225 PF03883 Peroxide stress protein YaaA HOO31_00230 PF01544 CorA-like Mg2+ transporter protein HOO31_00245 PF00156 Phosphoribosyl transferase domain HOO31_00250 PF01765 Ribosome recycling factor HOO31_00255 PF03840 Preprotein translocase SecG subunit HOO31_00265 PF02581 Thiamine monophosphate synthase HOO31_00265 PF17792 ThiD2 family HOO31_00270 PF01027 Inhibitor of apoptosis-promoting Bax1 HOO31_00300 PF01926 50S ribosome-binding GTPase HOO31_00300 PF07650 KH domain HOO31_00315 PF00437 Type II/IV secretion system protein HOO31_00320 PF00482 Type II secretion system (T2SS), protein F HOO31_00325 PF01544 CorA-like Mg2+ transporter protein HOO31_00330 PF01227 GTP cyclohydrolase I HOO31_00335 PF00005 ABC transporter HOO31_00335 PF08402 TOBE domain HOO31_00340 PF00528 Binding-protein-dependent transport system inner membrane component HOO31_00345 PF13416 Bacterial extracellular solute-binding protein HOO31_00350 PF00117 Glutamine amidotransferase class-I HOO31_00400 PF02677 Epoxyqueuosine reductase QueH HOO31_00405 PF02684 Lipid-A-disaccharide synthetase HOO31_00410 PF07977 FabA-like domain HOO31_00415 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HOO31_00415 PF00132 Bacterial transferase hexapeptide (six repeats) HOO31_00420 PF07724 AAA domain (Cdc48 subfamily) HOO31_00420 PF10431 C-terminal, D2-small domain, of ClpB protein HOO31_00420 PF06689 ClpX C4-type zinc finger HOO31_00435 PF00677 Lumazine binding domain HOO31_00440 PF01134 Glucose inhibited division protein A HOO31_00440 PF13932 GidA associated domain HOO31_00445 PF01261 Xylose isomerase-like TIM barrel HOO31_00450 PF00106 short chain dehydrogenase HOO31_00455 PF01740 STAS domain HOO31_00455 PF00916 Sulfate permease family HOO31_00470 PF00004 ATPase family associated with various cellular activities (AAA) HOO31_00470 PF16450 Proteasomal ATPase OB C-terminal domain HOO31_00470 PF17758 Proteasomal ATPase OB N-terminal domain HOO31_00480 PF02621 Menaquinone biosynthesis HOO31_00485 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HOO31_00490 PF01131 DNA topoisomerase HOO31_00490 PF01751 Toprim domain HOO31_00490 PF13368 Topoisomerase C-terminal repeat HOO31_00500 PF06968 Biotin and Thiamin Synthesis associated domain HOO31_00500 PF04055 Radical SAM superfamily HOO31_00505 PF00154 recA bacterial DNA recombination protein HOO31_00515 PF02719 Polysaccharide biosynthesis protein HOO31_00520 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HOO31_00525 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HOO31_00525 PF17191 RecG wedge domain HOO31_00525 PF00270 DEAD/DEAH box helicase HOO31_00530 PF02348 Cytidylyltransferase HOO31_00540 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HOO31_00540 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HOO31_00560 PF13193 AMP-binding enzyme C-terminal domain HOO31_00560 PF00501 AMP-binding enzyme HOO31_00560 PF00550 Phosphopantetheine attachment site HOO31_00560 PF00668 Condensation domain HOO31_00575 PF00106 short chain dehydrogenase HOO31_00580 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HOO31_00580 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HOO31_00595 PF01553 Acyltransferase HOO31_00595 PF00501 AMP-binding enzyme HOO31_00595 PF13193 AMP-binding enzyme C-terminal domain HOO31_00610 PF00753 Metallo-beta-lactamase superfamily HOO31_00615 PF03102 NeuB family HOO31_00615 PF08666 SAF domain HOO31_00620 PF04101 Glycosyltransferase family 28 C-terminal domain HOO31_00630 PF00700 Bacterial flagellin C-terminal helical region HOO31_00630 PF07196 Flagellin hook IN motif HOO31_00630 PF00669 Bacterial flagellin N-terminal helical region HOO31_00635 PF00669 Bacterial flagellin N-terminal helical region HOO31_00635 PF00700 Bacterial flagellin C-terminal helical region HOO31_00650 PF05958 tRNA (Uracil-5-)-methyltransferase HOO31_00665 PF00270 DEAD/DEAH box helicase HOO31_00665 PF17191 RecG wedge domain HOO31_00665 PF00271 Helicase conserved C-terminal domain HOO31_00675 PF14602 Hexapeptide repeat of succinyl-transferase HOO31_00675 PF12804 MobA-like NTP transferase domain HOO31_00680 PF04127 DNA / pantothenate metabolism flavoprotein HOO31_00680 PF02441 Flavoprotein HOO31_00685 PF01255 Putative undecaprenyl diphosphate synthase HOO31_00700 PF01416 tRNA pseudouridine synthase HOO31_00710 PF01628 HrcA protein C terminal domain HOO31_00715 PF01025 GrpE HOO31_00720 PF00012 Hsp70 protein HOO31_00740 PF04028 Domain of unknown function (DUF374) HOO31_00745 PF01938 TRAM domain HOO31_00745 PF00919 Uncharacterized protein family UPF0004 HOO31_00745 PF04055 Radical SAM superfamily HOO31_00755 PF13184 NusA-like KH domain HOO31_00755 PF08529 NusA N-terminal domain HOO31_00760 PF09190 DALR domain HOO31_00760 PF01406 tRNA synthetases class I (C) catalytic domain HOO31_00765 PF03960 ArsC family HOO31_00770 PF02686 Glu-tRNAGln amidotransferase C subunit HOO31_00775 PF01702 Queuine tRNA-ribosyltransferase HOO31_00790 PF01225 Mur ligase family, catalytic domain HOO31_00790 PF02875 Mur ligase family, glutamate ligase domain HOO31_00790 PF08245 Mur ligase middle domain HOO31_00805 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HOO31_00805 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HOO31_00810 PF00773 RNB domain HOO31_00820 PF06144 DNA polymerase III, delta subunit HOO31_00825 PF01250 Ribosomal protein S6 HOO31_00830 PF00436 Single-strand binding protein family HOO31_00835 PF01084 Ribosomal protein S18 HOO31_00840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HOO31_00845 PF03462 PCRF domain HOO31_00845 PF00472 RF-1 domain HOO31_00860 PF02660 Glycerol-3-phosphate acyltransferase HOO31_00865 PF02445 Quinolinate synthetase A protein HOO31_00870 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HOO31_00870 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HOO31_00885 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HOO31_00895 PF00288 GHMP kinases N terminal domain HOO31_00895 PF08544 GHMP kinases C terminal HOO31_00905 PF04760 Translation initiation factor IF-2, N-terminal region HOO31_00905 PF11987 Translation-initiation factor 2 HOO31_00905 PF00009 Elongation factor Tu GTP binding domain HOO31_00910 PF02033 Ribosome-binding factor A HOO31_00915 PF02576 RimP N-terminal domain HOO31_00920 PF01872 RibD C-terminal domain HOO31_00920 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HOO31_00925 PF01132 Elongation factor P (EF-P) OB domain HOO31_00925 PF08207 Elongation factor P (EF-P) KOW-like domain HOO31_00925 PF09285 Elongation factor P, C-terminal HOO31_00930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HOO31_00930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HOO31_00930 PF01842 ACT domain HOO31_00935 PF00575 S1 RNA binding domain HOO31_00940 PF02401 LytB protein HOO31_00945 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HOO31_00950 PF01588 Putative tRNA binding domain HOO31_00950 PF03147 Ferredoxin-fold anticodon binding domain HOO31_00950 PF03484 tRNA synthetase B5 domain HOO31_00950 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HOO31_00955 PF01409 tRNA synthetases class II core domain (F) HOO31_00955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HOO31_00960 PF01230 HIT domain HOO31_00965 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HOO31_00970 PF00109 Beta-ketoacyl synthase, N-terminal domain HOO31_00970 PF02801 Beta-ketoacyl synthase, C-terminal domain HOO31_00975 PF00550 Phosphopantetheine attachment site HOO31_00995 PF06508 Queuosine biosynthesis protein QueC HOO31_01015 PF00032 Cytochrome b(C-terminal)/b6/petD HOO31_01015 PF00033 Cytochrome b/b6/petB HOO31_01025 PF00291 Pyridoxal-phosphate dependent enzyme HOO31_01030 PF00696 Amino acid kinase family HOO31_01035 PF00580 UvrD/REP helicase N-terminal domain HOO31_01035 PF13361 UvrD-like helicase C-terminal domain HOO31_01035 PF12705 PD-(D/E)XK nuclease superfamily HOO31_01045 PF00119 ATP synthase A chain HOO31_01050 PF13291 ACT domain HOO31_01050 PF00291 Pyridoxal-phosphate dependent enzyme HOO31_01055 PF01116 Fructose-bisphosphate aldolase class-II HOO31_01065 PF00072 Response regulator receiver domain HOO31_01065 PF00486 Transcriptional regulatory protein, C terminal HOO31_01070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_01070 PF00512 His Kinase A (phospho-acceptor) domain HOO31_01075 PF01545 Cation efflux family HOO31_01075 PF16916 Dimerisation domain of Zinc Transporter HOO31_01100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HOO31_01100 PF02403 Seryl-tRNA synthetase N-terminal domain HOO31_01110 PF00563 EAL domain HOO31_01110 PF08495 FIST N domain HOO31_01110 PF10442 FIST C domain HOO31_01110 PF00990 Diguanylate cyclase, GGDEF domain HOO31_01130 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HOO31_01135 PF13237 4Fe-4S dicluster domain HOO31_01135 PF12801 4Fe-4S binding domain HOO31_01140 PF12838 4Fe-4S dicluster domain HOO31_01140 PF12800 4Fe-4S binding domain HOO31_01145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HOO31_01145 PF00384 Molybdopterin oxidoreductase HOO31_01145 PF01568 Molydopterin dinucleotide binding domain HOO31_01145 PF10518 TAT (twin-arginine translocation) pathway signal sequence HOO31_01160 PF02885 Glycosyl transferase family, helical bundle domain HOO31_01160 PF00591 Glycosyl transferase family, a/b domain HOO31_01165 PF06463 Molybdenum Cofactor Synthesis C HOO31_01165 PF04055 Radical SAM superfamily HOO31_01170 PF00312 Ribosomal protein S15 HOO31_01190 PF02203 Tar ligand binding domain homologue HOO31_01190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_01190 PF00672 HAMP domain HOO31_01215 PF01575 MaoC like domain HOO31_01220 PF00501 AMP-binding enzyme HOO31_01220 PF13193 AMP-binding enzyme C-terminal domain HOO31_01235 PF07728 AAA domain (dynein-related subfamily) HOO31_01235 PF12102 Domain of unknown function (DUF3578) HOO31_01250 PF02617 ATP-dependent Clp protease adaptor protein ClpS HOO31_01255 PF07724 AAA domain (Cdc48 subfamily) HOO31_01255 PF00004 ATPase family associated with various cellular activities (AAA) HOO31_01255 PF10431 C-terminal, D2-small domain, of ClpB protein HOO31_01255 PF17871 AAA lid domain HOO31_01255 PF02861 Clp amino terminal domain, pathogenicity island component HOO31_01290 PF03952 Enolase, N-terminal domain HOO31_01290 PF00113 Enolase, C-terminal TIM barrel domain HOO31_01305 PF07690 Major Facilitator Superfamily HOO31_01315 PF00164 Ribosomal protein S12/S23 HOO31_01320 PF00177 Ribosomal protein S7p/S5e HOO31_01325 PF03764 Elongation factor G, domain IV HOO31_01325 PF00679 Elongation factor G C-terminus HOO31_01325 PF00009 Elongation factor Tu GTP binding domain HOO31_01325 PF03144 Elongation factor Tu domain 2 HOO31_01325 PF14492 Elongation Factor G, domain II HOO31_01330 PF01513 ATP-NAD kinase HOO31_01335 PF13476 AAA domain HOO31_01340 PF17200 Single Cache domain 2 HOO31_01340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_01340 PF00672 HAMP domain HOO31_01345 PF01136 Peptidase family U32 HOO31_01355 PF00731 AIR carboxylase HOO31_01365 PF02091 Glycyl-tRNA synthetase alpha subunit HOO31_01370 PF01784 NIF3 (NGG1p interacting factor 3) HOO31_01380 PF02390 Putative methyltransferase HOO31_01380 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HOO31_01385 PF00849 RNA pseudouridylate synthase HOO31_01390 PF02978 Signal peptide binding domain HOO31_01390 PF00448 SRP54-type protein, GTPase domain HOO31_01390 PF02881 SRP54-type protein, helical bundle domain HOO31_01395 PF00886 Ribosomal protein S16 HOO31_01405 PF01782 RimM N-terminal domain HOO31_01420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO31_01420 PF00460 Flagella basal body rod protein HOO31_01425 PF00072 Response regulator receiver domain HOO31_01435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO31_01435 PF00460 Flagella basal body rod protein HOO31_01440 PF00460 Flagella basal body rod protein HOO31_01445 PF08345 Flagellar M-ring protein C-terminal HOO31_01445 PF01514 Secretory protein of YscJ/FliF family HOO31_01450 PF01706 FliG C-terminal domain HOO31_01450 PF14841 FliG middle domain HOO31_01450 PF14842 FliG N-terminal domain HOO31_01460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HOO31_01470 PF07559 Flagellar basal body protein FlaE HOO31_01470 PF07196 Flagellin hook IN motif HOO31_01470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO31_01470 PF00460 Flagella basal body rod protein HOO31_01475 PF07559 Flagellar basal body protein FlaE HOO31_01475 PF07196 Flagellin hook IN motif HOO31_01475 PF00460 Flagella basal body rod protein HOO31_01475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO31_01495 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HOO31_01495 PF16973 Flagellar motor switch protein FliN N-terminal HOO31_01515 PF00448 SRP54-type protein, GTPase domain HOO31_01520 PF10609 NUBPL iron-transfer P-loop NTPase HOO31_01530 PF02049 Flagellar hook-basal body complex protein FliE HOO31_01535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HOO31_01535 PF00460 Flagella basal body rod protein HOO31_01550 PF01312 FlhB HrpN YscU SpaS Family HOO31_01560 PF18269 T3SS EscN ATPase C-terminal domain HOO31_01560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HOO31_01570 PF00771 FHIPEP family HOO31_01580 PF01613 Flavin reductase like domain HOO31_01590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_01590 PF02203 Tar ligand binding domain homologue HOO31_01590 PF00672 HAMP domain HOO31_01595 PF07943 Penicillin-binding protein 5, C-terminal domain HOO31_01595 PF00768 D-alanyl-D-alanine carboxypeptidase HOO31_01600 PF08448 PAS fold HOO31_01600 PF08447 PAS fold HOO31_01600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_01610 PF00672 HAMP domain HOO31_01610 PF02203 Tar ligand binding domain homologue HOO31_01610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_01625 PF00486 Transcriptional regulatory protein, C terminal HOO31_01625 PF00072 Response regulator receiver domain HOO31_01630 PF08668 HDOD domain HOO31_01635 PF00672 HAMP domain HOO31_01635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_01635 PF02203 Tar ligand binding domain homologue HOO31_01640 PF00990 Diguanylate cyclase, GGDEF domain HOO31_01645 PF02203 Tar ligand binding domain homologue HOO31_01645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_01645 PF00672 HAMP domain HOO31_01650 PF08447 PAS fold HOO31_01650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_01655 PF00672 HAMP domain HOO31_01655 PF02203 Tar ligand binding domain homologue HOO31_01655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_01665 PF00990 Diguanylate cyclase, GGDEF domain HOO31_01665 PF03707 Bacterial signalling protein N terminal repeat HOO31_01665 PF00563 EAL domain HOO31_01670 PF01717 Cobalamin-independent synthase, Catalytic domain HOO31_01670 PF08267 Cobalamin-independent synthase, N-terminal domain HOO31_01680 PF01746 tRNA (Guanine-1)-methyltransferase HOO31_01685 PF01245 Ribosomal protein L19 HOO31_01690 PF09335 SNARE associated Golgi protein HOO31_01695 PF00155 Aminotransferase class I and II HOO31_01700 PF12833 Helix-turn-helix domain HOO31_01710 PF01042 Endoribonuclease L-PSP HOO31_01715 PF06738 Putative threonine/serine exporter HOO31_01715 PF12821 Threonine/Serine exporter, ThrE HOO31_01720 PF06738 Putative threonine/serine exporter HOO31_01735 PF01618 MotA/TolQ/ExbB proton channel family HOO31_01740 PF02472 Biopolymer transport protein ExbD/TolR HOO31_01745 PF00171 Aldehyde dehydrogenase family HOO31_01750 PF02659 Putative manganese efflux pump HOO31_01765 PF00579 tRNA synthetases class I (W and Y) HOO31_01775 PF01594 AI-2E family transporter HOO31_01785 PF01634 ATP phosphoribosyltransferase HOO31_01790 PF03309 Type III pantothenate kinase HOO31_01805 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HOO31_01820 PF05538 Campylobacter major outer membrane protein HOO31_01825 PF01202 Shikimate kinase HOO31_01830 PF00815 Histidinol dehydrogenase HOO31_01840 PF00348 Polyprenyl synthetase HOO31_01845 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HOO31_01845 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HOO31_01845 PF01488 Shikimate / quinate 5-dehydrogenase HOO31_01850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HOO31_01850 PF04073 Aminoacyl-tRNA editing domain HOO31_01850 PF03129 Anticodon binding domain HOO31_01855 PF05552 Conserved TM helix HOO31_01855 PF00924 Mechanosensitive ion channel HOO31_01860 PF12627 Probable RNA and SrmB- binding site of polymerase A HOO31_01860 PF01743 Poly A polymerase head domain HOO31_01860 PF12626 Polymerase A arginine-rich C-terminus HOO31_01870 PF02699 Preprotein translocase subunit HOO31_01875 PF02355 Protein export membrane protein HOO31_01880 PF07549 SecD/SecF GG Motif HOO31_01880 PF02355 Protein export membrane protein HOO31_01895 PF00691 OmpA family HOO31_01895 PF13677 Membrane MotB of proton-channel complex MotA/MotB HOO31_01900 PF01618 MotA/TolQ/ExbB proton channel family HOO31_01910 PF09334 tRNA synthetases class I (M) HOO31_01910 PF13603 Leucyl-tRNA synthetase, Domain 2 HOO31_01910 PF00133 tRNA synthetases class I (I, L, M and V) HOO31_01920 PF08245 Mur ligase middle domain HOO31_01940 PF14659 Phage integrase, N-terminal SAM-like domain HOO31_01940 PF00589 Phage integrase family HOO31_01995 PF01043 SecA preprotein cross-linking domain HOO31_01995 PF07516 SecA Wing and Scaffold domain HOO31_01995 PF02810 SEC-C motif HOO31_01995 PF07517 SecA DEAD-like domain HOO31_02025 PF02559 CarD-like/TRCF domain HOO31_02025 PF00270 DEAD/DEAH box helicase HOO31_02025 PF00271 Helicase conserved C-terminal domain HOO31_02025 PF03461 TRCF domain HOO31_02025 PF17757 UvrB interaction domain HOO31_02035 PF13302 Acetyltransferase (GNAT) domain HOO31_02045 PF08360 QacR-like protein, C-terminal region HOO31_02045 PF00440 Bacterial regulatory proteins, tetR family HOO31_02090 PF00912 Transglycosylase HOO31_02090 PF00905 Penicillin binding protein transpeptidase domain HOO31_02095 PF00005 ABC transporter HOO31_02095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HOO31_02100 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HOO31_02100 PF01676 Metalloenzyme superfamily HOO31_02105 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HOO31_02105 PF00953 Glycosyl transferase family 4 HOO31_02110 PF08245 Mur ligase middle domain HOO31_02135 PF03143 Elongation factor Tu C-terminal domain HOO31_02135 PF03144 Elongation factor Tu domain 2 HOO31_02135 PF00009 Elongation factor Tu GTP binding domain HOO31_02140 PF00471 Ribosomal protein L33 HOO31_02155 PF02357 Transcription termination factor nusG HOO31_02160 PF00298 Ribosomal protein L11, RNA binding domain HOO31_02160 PF03946 Ribosomal protein L11, N-terminal domain HOO31_02165 PF00687 Ribosomal protein L1p/L10e family HOO31_02170 PF00466 Ribosomal protein L10 HOO31_02175 PF00542 Ribosomal protein L7/L12 C-terminal domain HOO31_02175 PF16320 Ribosomal protein L7/L12 dimerisation domain HOO31_02180 PF10385 RNA polymerase beta subunit external 1 domain HOO31_02180 PF04560 RNA polymerase Rpb2, domain 7 HOO31_02180 PF04565 RNA polymerase Rpb2, domain 3 HOO31_02180 PF00562 RNA polymerase Rpb2, domain 6 HOO31_02180 PF04563 RNA polymerase beta subunit HOO31_02180 PF04561 RNA polymerase Rpb2, domain 2 HOO31_02185 PF00623 RNA polymerase Rpb1, domain 2 HOO31_02185 PF04997 RNA polymerase Rpb1, domain 1 HOO31_02185 PF04983 RNA polymerase Rpb1, domain 3 HOO31_02185 PF05000 RNA polymerase Rpb1, domain 4 HOO31_02185 PF04998 RNA polymerase Rpb1, domain 5 HOO31_02205 PF00255 Glutathione peroxidase HOO31_02210 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HOO31_02210 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HOO31_02210 PF10518 TAT (twin-arginine translocation) pathway signal sequence HOO31_02215 PF00374 Nickel-dependent hydrogenase HOO31_02220 PF01292 Prokaryotic cytochrome b561 HOO31_02225 PF01750 Hydrogenase maturation protease HOO31_02235 PF07503 HypF finger HOO31_02235 PF01300 Telomere recombination HOO31_02235 PF17788 HypF Kae1-like domain HOO31_02235 PF00708 Acylphosphatase HOO31_02250 PF02492 CobW/HypB/UreG, nucleotide-binding domain HOO31_02255 PF01455 HupF/HypC family HOO31_02260 PF01924 Hydrogenase formation hypA family HOO31_02265 PF17761 DUF1016 N-terminal domain HOO31_02265 PF06250 YhcG PDDEXK nuclease domain HOO31_02275 PF00586 AIR synthase related protein, N-terminal domain HOO31_02275 PF02769 AIR synthase related protein, C-terminal domain HOO31_02280 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HOO31_02290 PF13190 PDGLE domain HOO31_02290 PF01891 Cobalt uptake substrate-specific transmembrane region HOO31_02305 PF00005 ABC transporter HOO31_02310 PF01930 Domain of unknown function DUF83 HOO31_02315 PF09827 CRISPR associated protein Cas2 HOO31_02325 PF00793 DAHP synthetase I family HOO31_02335 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HOO31_02345 PF03631 Virulence factor BrkB HOO31_02350 PF02913 FAD linked oxidases, C-terminal domain HOO31_02350 PF01565 FAD binding domain HOO31_02360 PF00578 AhpC/TSA family HOO31_02365 PF13649 Methyltransferase domain HOO31_02370 PF01687 Riboflavin kinase HOO31_02370 PF06574 FAD synthetase HOO31_02375 PF01479 S4 domain HOO31_02375 PF01728 FtsJ-like methyltransferase HOO31_02385 PF16226 Domain of unknown function (DUF4885) HOO31_02390 PF16226 Domain of unknown function (DUF4885) HOO31_02415 PF01205 Uncharacterized protein family UPF0029 HOO31_02415 PF09186 Domain of unknown function (DUF1949) HOO31_02435 PF00459 Inositol monophosphatase family HOO31_02440 PF00037 4Fe-4S binding domain HOO31_02450 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HOO31_02470 PF13477 Glycosyl transferase 4-like HOO31_02470 PF00534 Glycosyl transferases group 1 HOO31_02490 PF00534 Glycosyl transferases group 1 HOO31_02490 PF13439 Glycosyltransferase Family 4 HOO31_02505 PF00535 Glycosyl transferase family 2 HOO31_02510 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HOO31_02525 PF13580 SIS domain HOO31_02530 PF01467 Cytidylyltransferase-like HOO31_02530 PF00294 pfkB family carbohydrate kinase HOO31_02535 PF01370 NAD dependent epimerase/dehydratase family HOO31_02550 PF00830 Ribosomal L28 family HOO31_02560 PF01960 ArgJ family HOO31_02570 PF00521 DNA gyrase/topoisomerase IV, subunit A HOO31_02570 PF03989 DNA gyrase C-terminal domain, beta-propeller HOO31_02575 PF01118 Semialdehyde dehydrogenase, NAD binding domain HOO31_02575 PF02774 Semialdehyde dehydrogenase, dimerisation domain HOO31_02585 PF01208 Uroporphyrinogen decarboxylase (URO-D) HOO31_02635 PF00005 ABC transporter HOO31_02650 PF04264 YceI-like domain HOO31_02660 PF00149 Calcineurin-like phosphoesterase HOO31_02665 PF00486 Transcriptional regulatory protein, C terminal HOO31_02665 PF00072 Response regulator receiver domain HOO31_02670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_02670 PF00512 His Kinase A (phospho-acceptor) domain HOO31_02670 PF00672 HAMP domain HOO31_02675 PF00005 ABC transporter HOO31_02680 PF00950 ABC 3 transport family HOO31_02685 PF17783 CvfB-like winged helix domain HOO31_02685 PF13509 S1 domain HOO31_02690 PF08534 Redoxin HOO31_02710 PF10458 Valyl tRNA synthetase tRNA binding arm HOO31_02710 PF00133 tRNA synthetases class I (I, L, M and V) HOO31_02710 PF08264 Anticodon-binding domain of tRNA HOO31_02725 PF13426 PAS domain HOO31_02725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_02725 PF08447 PAS fold HOO31_02735 PF07690 Major Facilitator Superfamily HOO31_02740 PF01725 Ham1 family HOO31_02760 PF03807 NADP oxidoreductase coenzyme F420-dependent HOO31_02760 PF14748 Pyrroline-5-carboxylate reductase dimerisation HOO31_02770 PF13525 Outer membrane lipoprotein HOO31_02775 PF02190 ATP-dependent protease La (LON) substrate-binding domain HOO31_02775 PF05362 Lon protease (S16) C-terminal proteolytic domain HOO31_02775 PF00004 ATPase family associated with various cellular activities (AAA) HOO31_02785 PF01451 Low molecular weight phosphotyrosine protein phosphatase HOO31_02805 PF02785 Biotin carboxylase C-terminal domain HOO31_02805 PF00289 Biotin carboxylase, N-terminal domain HOO31_02805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HOO31_02815 PF02657 Fe-S metabolism associated domain HOO31_02820 PF00266 Aminotransferase class-V HOO31_02830 PF00005 ABC transporter HOO31_02835 PF01458 Uncharacterized protein family (UPF0051) HOO31_02840 PF04324 BFD-like [2Fe-2S] binding domain HOO31_02840 PF01106 NifU-like domain HOO31_02840 PF01592 NifU-like N terminal domain HOO31_02850 PF07694 5TMR of 5TMR-LYT HOO31_02850 PF00990 Diguanylate cyclase, GGDEF domain HOO31_02855 PF00206 Lyase HOO31_02855 PF14698 Argininosuccinate lyase C-terminal HOO31_02860 PF00271 Helicase conserved C-terminal domain HOO31_02860 PF04851 Type III restriction enzyme, res subunit HOO31_02860 PF02151 UvrB/uvrC motif HOO31_02860 PF12344 Ultra-violet resistance protein B HOO31_02860 PF17757 UvrB interaction domain HOO31_02870 PF01272 Transcription elongation factor, GreA/GreB, C-term HOO31_02870 PF03449 Transcription elongation factor, N-terminal HOO31_02875 PF00899 ThiF family HOO31_02880 PF01584 CheW-like domain HOO31_02880 PF00072 Response regulator receiver domain HOO31_02895 PF00633 Helix-hairpin-helix motif HOO31_02895 PF00730 HhH-GPD superfamily base excision DNA repair protein HOO31_02895 PF10576 Iron-sulfur binding domain of endonuclease III HOO31_02900 PF02769 AIR synthase related protein, C-terminal domain HOO31_02900 PF00586 AIR synthase related protein, N-terminal domain HOO31_02905 PF01142 tRNA pseudouridine synthase D (TruD) HOO31_02915 PF02203 Tar ligand binding domain homologue HOO31_02915 PF00672 HAMP domain HOO31_02915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_02920 PF07499 RuvA, C-terminal domain HOO31_02920 PF01330 RuvA N terminal domain HOO31_02925 PF07478 D-ala D-ala ligase C-terminus HOO31_02925 PF01820 D-ala D-ala ligase N-terminus HOO31_02935 PF02875 Mur ligase family, glutamate ligase domain HOO31_02935 PF08245 Mur ligase middle domain HOO31_03000 PF00589 Phage integrase family HOO31_03000 PF02899 Phage integrase, N-terminal SAM-like domain HOO31_03020 PF02796 Helix-turn-helix domain of resolvase HOO31_03020 PF00239 Resolvase, N terminal domain HOO31_03025 PF02976 DNA mismatch repair enzyme MutH HOO31_03035 PF00145 C-5 cytosine-specific DNA methylase HOO31_03045 PF01051 Initiator Replication protein HOO31_03075 PF13356 Arm DNA-binding domain HOO31_03075 PF00589 Phage integrase family HOO31_03090 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HOO31_03095 PF01029 NusB family HOO31_03100 PF00885 6,7-dimethyl-8-ribityllumazine synthase HOO31_03105 PF03951 Glutamine synthetase, beta-Grasp domain HOO31_03105 PF00120 Glutamine synthetase, catalytic domain HOO31_03115 PF02391 MoaE protein HOO31_03125 PF02621 Menaquinone biosynthesis HOO31_03130 PF02673 Bacitracin resistance protein BacA HOO31_03135 PF03033 Glycosyltransferase family 28 N-terminal domain HOO31_03135 PF04101 Glycosyltransferase family 28 C-terminal domain HOO31_03140 PF01098 Cell cycle protein HOO31_03145 PF03717 Penicillin-binding Protein dimerisation domain HOO31_03145 PF00905 Penicillin binding protein transpeptidase domain HOO31_03145 PF03793 PASTA domain HOO31_03150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HOO31_03155 PF03150 Di-haem cytochrome c peroxidase HOO31_03160 PF04116 Fatty acid hydroxylase superfamily HOO31_03185 PF00137 ATP synthase subunit C HOO31_03200 PF00005 ABC transporter HOO31_03205 PF00528 Binding-protein-dependent transport system inner membrane component HOO31_03210 PF03480 Bacterial extracellular solute-binding protein, family 7 HOO31_03215 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HOO31_03220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HOO31_03225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_03225 PF08447 PAS fold HOO31_03225 PF08448 PAS fold HOO31_03230 PF00072 Response regulator receiver domain HOO31_03240 PF00990 Diguanylate cyclase, GGDEF domain HOO31_03240 PF00072 Response regulator receiver domain HOO31_03250 PF00072 Response regulator receiver domain HOO31_03250 PF00486 Transcriptional regulatory protein, C terminal HOO31_03265 PF00672 HAMP domain HOO31_03265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_03265 PF02203 Tar ligand binding domain homologue HOO31_03270 PF02954 Bacterial regulatory protein, Fis family HOO31_03270 PF00072 Response regulator receiver domain HOO31_03270 PF00158 Sigma-54 interaction domain HOO31_03275 PF13426 PAS domain HOO31_03275 PF07536 HWE histidine kinase HOO31_03275 PF13581 Histidine kinase-like ATPase domain HOO31_03280 PF13188 PAS domain HOO31_03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_03280 PF00512 His Kinase A (phospho-acceptor) domain HOO31_03280 PF00989 PAS fold HOO31_03280 PF13426 PAS domain HOO31_03285 PF13277 YmdB-like protein HOO31_03300 PF01209 ubiE/COQ5 methyltransferase family HOO31_03305 PF13742 OB-fold nucleic acid binding domain HOO31_03305 PF02601 Exonuclease VII, large subunit HOO31_03310 PF01584 CheW-like domain HOO31_03315 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HOO31_03320 PF02261 Aspartate decarboxylase HOO31_03325 PF02575 YbaB/EbfC DNA-binding family HOO31_03330 PF00348 Polyprenyl synthetase HOO31_03335 PF00166 Chaperonin 10 Kd subunit HOO31_03340 PF00118 TCP-1/cpn60 chaperonin family HOO31_03345 PF07943 Penicillin-binding protein 5, C-terminal domain HOO31_03345 PF00768 D-alanyl-D-alanine carboxypeptidase HOO31_03350 PF00990 Diguanylate cyclase, GGDEF domain HOO31_03360 PF02472 Biopolymer transport protein ExbD/TolR HOO31_03365 PF01618 MotA/TolQ/ExbB proton channel family HOO31_03380 PF00005 ABC transporter HOO31_03380 PF02687 FtsX-like permease family HOO31_03380 PF12704 MacB-like periplasmic core domain HOO31_03385 PF00005 ABC transporter HOO31_03385 PF02687 FtsX-like permease family HOO31_03385 PF12704 MacB-like periplasmic core domain HOO31_03390 PF01351 Ribonuclease HII HOO31_03395 PF10431 C-terminal, D2-small domain, of ClpB protein HOO31_03395 PF17871 AAA lid domain HOO31_03395 PF02861 Clp amino terminal domain, pathogenicity island component HOO31_03395 PF00004 ATPase family associated with various cellular activities (AAA) HOO31_03395 PF07724 AAA domain (Cdc48 subfamily) HOO31_03400 PF00468 Ribosomal protein L34 HOO31_03405 PF00825 Ribonuclease P HOO31_03410 PF01809 Putative membrane protein insertion efficiency factor HOO31_03415 PF02096 60Kd inner membrane protein HOO31_03415 PF14849 YidC periplasmic domain HOO31_03425 PF10396 GTP-binding protein TrmE N-terminus HOO31_03425 PF12631 MnmE helical domain HOO31_03425 PF01926 50S ribosome-binding GTPase HOO31_03435 PF00300 Histidine phosphatase superfamily (branch 1) HOO31_03445 PF00990 Diguanylate cyclase, GGDEF domain HOO31_03445 PF17158 Membrane-associated sensor, integral membrane domain HOO31_03455 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HOO31_03460 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HOO31_03465 PF04715 Anthranilate synthase component I, N terminal region HOO31_03465 PF00425 chorismate binding enzyme HOO31_03475 PF00464 Serine hydroxymethyltransferase HOO31_03480 PF00152 tRNA synthetases class II (D, K and N) HOO31_03480 PF01336 OB-fold nucleic acid binding domain HOO31_03490 PF08447 PAS fold HOO31_03490 PF08448 PAS fold HOO31_03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_03495 PF04551 GcpE protein HOO31_03500 PF00772 DnaB-like helicase N terminal domain HOO31_03500 PF03796 DnaB-like helicase C terminal domain HOO31_03505 PF08334 Type II secretion system (T2SS), protein G HOO31_03505 PF07963 Prokaryotic N-terminal methylation motif HOO31_03510 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HOO31_03515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HOO31_03515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HOO31_03520 PF00593 TonB dependent receptor HOO31_03520 PF07715 TonB-dependent Receptor Plug Domain HOO31_03540 PF02554 Carbon starvation protein CstA HOO31_03540 PF13722 5TM C-terminal transporter carbon starvation CstA HOO31_03545 PF05191 Adenylate kinase, active site lid HOO31_03560 PF17158 Membrane-associated sensor, integral membrane domain HOO31_03560 PF00990 Diguanylate cyclase, GGDEF domain HOO31_03565 PF00155 Aminotransferase class I and II HOO31_03570 PF00465 Iron-containing alcohol dehydrogenase HOO31_03575 PF00672 HAMP domain HOO31_03575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_03575 PF02203 Tar ligand binding domain homologue HOO31_03580 PF00842 Alanine racemase, C-terminal domain HOO31_03580 PF01168 Alanine racemase, N-terminal domain HOO31_03585 PF08459 UvrC Helix-hairpin-helix N-terminal HOO31_03585 PF02151 UvrB/uvrC motif HOO31_03585 PF01541 GIY-YIG catalytic domain HOO31_03590 PF02203 Tar ligand binding domain homologue HOO31_03590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_03590 PF00672 HAMP domain HOO31_03595 PF00873 AcrB/AcrD/AcrF family HOO31_03600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO31_03600 PF00529 HlyD membrane-fusion protein of T1SS HOO31_03615 PF00486 Transcriptional regulatory protein, C terminal HOO31_03615 PF00072 Response regulator receiver domain HOO31_03620 PF08447 PAS fold HOO31_03620 PF08448 PAS fold HOO31_03620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_03625 PF08534 Redoxin HOO31_03625 PF01641 SelR domain HOO31_03625 PF01625 Peptide methionine sulfoxide reductase HOO31_03630 PF00873 AcrB/AcrD/AcrF family HOO31_03635 PF00873 AcrB/AcrD/AcrF family HOO31_03640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HOO31_03650 PF11849 Domain of unknown function (DUF3369) HOO31_03655 PF00813 FliP family HOO31_03660 PF03717 Penicillin-binding Protein dimerisation domain HOO31_03660 PF00905 Penicillin binding protein transpeptidase domain HOO31_03680 PF00005 ABC transporter HOO31_03685 PF02390 Putative methyltransferase HOO31_03695 PF01479 S4 domain HOO31_03695 PF00849 RNA pseudouridylate synthase HOO31_03700 PF01098 Cell cycle protein HOO31_03710 PF00202 Aminotransferase class-III HOO31_03715 PF06865 Pyrimidine/purine nucleoside phosphorylase HOO31_03735 PF00753 Metallo-beta-lactamase superfamily HOO31_03735 PF16123 Hydroxyacylglutathione hydrolase C-terminus HOO31_03795 PF00174 Oxidoreductase molybdopterin binding domain HOO31_03800 PF02254 TrkA-N domain HOO31_03800 PF02080 TrkA-C domain HOO31_03800 PF00999 Sodium/hydrogen exchanger family HOO31_03805 PF00580 UvrD/REP helicase N-terminal domain HOO31_03805 PF13361 UvrD-like helicase C-terminal domain HOO31_03810 PF02769 AIR synthase related protein, C-terminal domain HOO31_03810 PF00586 AIR synthase related protein, N-terminal domain HOO31_03815 PF01841 Transglutaminase-like superfamily HOO31_03835 PF02954 Bacterial regulatory protein, Fis family HOO31_03835 PF00072 Response regulator receiver domain HOO31_03835 PF00158 Sigma-54 interaction domain HOO31_03840 PF08448 PAS fold HOO31_03840 PF08447 PAS fold HOO31_03840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_03865 PF12838 4Fe-4S dicluster domain HOO31_03865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HOO31_03865 PF00384 Molybdopterin oxidoreductase HOO31_03865 PF01568 Molydopterin dinucleotide binding domain HOO31_03865 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HOO31_03870 PF01568 Molydopterin dinucleotide binding domain HOO31_03870 PF00384 Molybdopterin oxidoreductase HOO31_03870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HOO31_03875 PF13247 4Fe-4S dicluster domain HOO31_03885 PF02634 FdhD/NarQ family HOO31_03905 PF03453 MoeA N-terminal region (domain I and II) HOO31_03905 PF00994 Probable molybdopterin binding domain HOO31_03905 PF03454 MoeA C-terminal region (domain IV) HOO31_03910 PF12849 PBP superfamily domain HOO31_03915 PF00528 Binding-protein-dependent transport system inner membrane component HOO31_03920 PF00005 ABC transporter HOO31_03935 PF12823 Domain of unknown function (DUF3817) HOO31_03945 PF05661 Protein of unknown function (DUF808) HOO31_03950 PF01522 Polysaccharide deacetylase HOO31_03960 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HOO31_03960 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HOO31_03985 PF00270 DEAD/DEAH box helicase HOO31_03985 PF17764 3′ DNA-binding domain (3′BD) HOO31_03985 PF18074 Primosomal protein N C-terminal domain HOO31_03985 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HOO31_03985 PF00271 Helicase conserved C-terminal domain HOO31_03990 PF14602 Hexapeptide repeat of succinyl-transferase HOO31_03990 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HOO31_03995 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HOO31_03995 PF18381 YcaO cyclodehydratase C-terminal domain HOO31_04000 PF12833 Helix-turn-helix domain HOO31_04000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HOO31_04000 PF02805 Metal binding domain of Ada HOO31_04000 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HOO31_04005 PF00464 Serine hydroxymethyltransferase HOO31_04020 PF01595 Cyclin M transmembrane N-terminal domain HOO31_04020 PF03471 Transporter associated domain HOO31_04020 PF00571 CBS domain HOO31_04025 PF01594 AI-2E family transporter HOO31_04050 PF01594 AI-2E family transporter HOO31_04055 PF17864 RuvB AAA lid domain HOO31_04055 PF05491 RuvB C-terminal winged helix domain HOO31_04055 PF05496 Holliday junction DNA helicase RuvB P-loop domain HOO31_04060 PF02548 Ketopantoate hydroxymethyltransferase HOO31_04065 PF00290 Tryptophan synthase alpha chain HOO31_04070 PF04376 Arginine-tRNA-protein transferase, N terminus HOO31_04070 PF04377 Arginine-tRNA-protein transferase, C terminus HOO31_04080 PF07664 Ferrous iron transport protein B C terminus HOO31_04080 PF02421 Ferrous iron transport protein B HOO31_04080 PF07670 Nucleoside recognition HOO31_04090 PF01475 Ferric uptake regulator family HOO31_04095 PF00764 Arginosuccinate synthase HOO31_04100 PF00528 Binding-protein-dependent transport system inner membrane component HOO31_04100 PF12911 N-terminal TM domain of oligopeptide transport permease C HOO31_04110 PF00013 KH domain HOO31_04110 PF01966 HD domain HOO31_04110 PF12072 Domain of unknown function (DUF3552) HOO31_04115 PF01812 5-formyltetrahydrofolate cyclo-ligase family HOO31_04125 PF00448 SRP54-type protein, GTPase domain HOO31_04145 PF01638 HxlR-like helix-turn-helix HOO31_04150 PF02525 Flavodoxin-like fold HOO31_04155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HOO31_04160 PF00881 Nitroreductase family HOO31_04170 PF00005 ABC transporter HOO31_04170 PF12848 ABC transporter HOO31_04175 PF03061 Thioesterase superfamily HOO31_04180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_04180 PF00672 HAMP domain HOO31_04180 PF02203 Tar ligand binding domain homologue HOO31_04190 PF00684 DnaJ central domain HOO31_04190 PF01556 DnaJ C terminal domain HOO31_04190 PF00226 DnaJ domain HOO31_04195 PF00226 DnaJ domain HOO31_04195 PF01556 DnaJ C terminal domain HOO31_04195 PF00684 DnaJ central domain HOO31_04200 PF00933 Glycosyl hydrolase family 3 N terminal domain HOO31_04215 PF00106 short chain dehydrogenase HOO31_04225 PF00591 Glycosyl transferase family, a/b domain HOO31_04225 PF02885 Glycosyl transferase family, helical bundle domain HOO31_04230 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HOO31_04235 PF12399 Branched-chain amino acid ATP-binding cassette transporter HOO31_04235 PF00005 ABC transporter HOO31_04245 PF07581 The GLUG motif HOO31_04245 PF00746 LPXTG cell wall anchor motif HOO31_04245 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region HOO31_04245 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region HOO31_04245 PF04650 YSIRK type signal peptide HOO31_04245 PF07501 G5 domain HOO31_04255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_04255 PF00072 Response regulator receiver domain HOO31_04260 PF02348 Cytidylyltransferase HOO31_04270 PF01339 CheB methylesterase HOO31_04270 PF00072 Response regulator receiver domain HOO31_04280 PF09411 Lipid A 3-O-deacylase (PagL) HOO31_04285 PF01790 Prolipoprotein diacylglyceryl transferase HOO31_04305 PF00072 Response regulator receiver domain HOO31_04305 PF00990 Diguanylate cyclase, GGDEF domain HOO31_04330 PF00893 Small Multidrug Resistance protein HOO31_04335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_04340 PF00072 Response regulator receiver domain HOO31_04340 PF00486 Transcriptional regulatory protein, C terminal HOO31_04350 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HOO31_04360 PF06434 Aconitate hydratase 2 N-terminus HOO31_04360 PF11791 Aconitate B N-terminal domain HOO31_04360 PF00330 Aconitase family (aconitate hydratase) HOO31_04365 PF00156 Phosphoribosyl transferase domain HOO31_04370 PF04241 Protein of unknown function (DUF423) HOO31_04375 PF04461 Protein of unknown function (DUF520) HOO31_04380 PF00293 NUDIX domain HOO31_04410 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HOO31_04410 PF00925 GTP cyclohydrolase II HOO31_04420 PF01293 Phosphoenolpyruvate carboxykinase HOO31_04435 PF00133 tRNA synthetases class I (I, L, M and V) HOO31_04435 PF09334 tRNA synthetases class I (M) HOO31_04435 PF01588 Putative tRNA binding domain HOO31_04445 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HOO31_04465 PF02325 YGGT family HOO31_04470 PF00749 tRNA synthetases class I (E and Q), catalytic domain HOO31_04475 PF05193 Peptidase M16 inactive domain HOO31_04480 PF04055 Radical SAM superfamily HOO31_04485 PF01103 Surface antigen HOO31_04485 PF07244 Surface antigen variable number repeat HOO31_04490 PF01842 ACT domain HOO31_04490 PF02153 Prephenate dehydrogenase HOO31_04505 PF01568 Molydopterin dinucleotide binding domain HOO31_04505 PF00384 Molybdopterin oxidoreductase HOO31_04505 PF18364 Molybdopterin oxidoreductase N-terminal domain HOO31_04510 PF00009 Elongation factor Tu GTP binding domain HOO31_04510 PF03144 Elongation factor Tu domain 2 HOO31_04510 PF09105 Elongation factor SelB, winged helix HOO31_04510 PF09107 Elongation factor SelB, winged helix HOO31_04510 PF09106 Elongation factor SelB, winged helix HOO31_04515 PF03841 L-seryl-tRNA selenium transferase HOO31_04520 PF02253 Phospholipase A1 HOO31_04525 PF00834 Ribulose-phosphate 3 epimerase family HOO31_04530 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HOO31_04535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HOO31_04535 PF11490 DNA polymerase III polC-type N-terminus II HOO31_04535 PF14480 DNA polymerase III polC-type N-terminus I HOO31_04535 PF14579 Helix-hairpin-helix motif HOO31_04535 PF07733 Bacterial DNA polymerase III alpha NTPase domain HOO31_04535 PF02811 PHP domain HOO31_04535 PF00929 Exonuclease HOO31_04545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HOO31_04550 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HOO31_04550 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HOO31_04550 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HOO31_04560 PF05175 Methyltransferase small domain HOO31_04565 PF03692 Putative zinc- or iron-chelating domain HOO31_04575 PF00218 Indole-3-glycerol phosphate synthase HOO31_04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO31_04580 PF03466 LysR substrate binding domain HOO31_04585 PF01361 Tautomerase enzyme HOO31_04590 PF00990 Diguanylate cyclase, GGDEF domain HOO31_04600 PF04225 Opacity-associated protein A LysM-like domain HOO31_04600 PF01551 Peptidase family M23 HOO31_04605 PF09424 Yqey-like protein HOO31_04610 PF00005 ABC transporter HOO31_04610 PF12848 ABC transporter HOO31_04610 PF16326 ABC transporter C-terminal domain HOO31_04615 PF13662 Toprim domain HOO31_04615 PF02132 RecR protein HOO31_04635 PF00248 Aldo/keto reductase family HOO31_04640 PF02416 mttA/Hcf106 family HOO31_04645 PF00902 Sec-independent protein translocase protein (TatC) HOO31_04650 PF02547 Queuosine biosynthesis protein HOO31_04655 PF00929 Exonuclease HOO31_04655 PF13307 Helicase C-terminal domain HOO31_04660 PF05099 Tellurite resistance protein TerB HOO31_04660 PF00226 DnaJ domain HOO31_04675 PF02540 NAD synthase HOO31_04680 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HOO31_04685 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HOO31_04690 PF03741 Integral membrane protein TerC family HOO31_04695 PF13411 MerR HTH family regulatory protein HOO31_04700 PF00226 DnaJ domain HOO31_04700 PF01556 DnaJ C terminal domain HOO31_04705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_04705 PF00512 His Kinase A (phospho-acceptor) domain HOO31_04705 PF00989 PAS fold HOO31_04705 PF08447 PAS fold HOO31_04715 PF00072 Response regulator receiver domain HOO31_04735 PF00216 Bacterial DNA-binding protein HOO31_04740 PF00589 Phage integrase family HOO31_04740 PF14659 Phage integrase, N-terminal SAM-like domain HOO31_04845 PF03796 DnaB-like helicase C terminal domain HOO31_04845 PF00772 DnaB-like helicase N terminal domain HOO31_05020 PF01795 MraW methylase family HOO31_05050 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HOO31_05050 PF00056 lactate/malate dehydrogenase, NAD binding domain HOO31_05055 PF03971 Monomeric isocitrate dehydrogenase HOO31_05060 PF02618 YceG-like family HOO31_05070 PF00488 MutS domain V HOO31_05070 PF01713 Smr domain HOO31_05075 PF00571 CBS domain HOO31_05075 PF01595 Cyclin M transmembrane N-terminal domain HOO31_05075 PF03471 Transporter associated domain HOO31_05085 PF00005 ABC transporter HOO31_05090 PF01113 Dihydrodipicolinate reductase, N-terminus HOO31_05090 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain HOO31_05095 PF03473 MOSC domain HOO31_05100 PF00202 Aminotransferase class-III HOO31_05110 PF03594 Benzoate membrane transport protein HOO31_05120 PF06969 HemN C-terminal domain HOO31_05120 PF04055 Radical SAM superfamily HOO31_05125 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HOO31_05125 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HOO31_05135 PF07568 Histidine kinase HOO31_05135 PF12282 Signal transduction histidine kinase HOO31_05135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_05160 PF03477 ATP cone domain HOO31_05160 PF00317 Ribonucleotide reductase, all-alpha domain HOO31_05160 PF02867 Ribonucleotide reductase, barrel domain HOO31_05175 PF00809 Pterin binding enzyme HOO31_05190 PF00696 Amino acid kinase family HOO31_05190 PF01842 ACT domain HOO31_05190 PF13840 ACT domain HOO31_05195 PF00293 NUDIX domain HOO31_05200 PF06969 HemN C-terminal domain HOO31_05200 PF04055 Radical SAM superfamily HOO31_05205 PF05175 Methyltransferase small domain HOO31_05205 PF17827 PrmC N-terminal domain HOO31_05210 PF01432 Peptidase family M3 HOO31_05225 PF03061 Thioesterase superfamily HOO31_05230 PF13091 PLD-like domain HOO31_05235 PF16491 CAAX prenyl protease N-terminal, five membrane helices HOO31_05235 PF01435 Peptidase family M48 HOO31_05240 PF02646 RmuC family HOO31_05245 PF04228 Putative neutral zinc metallopeptidase HOO31_05255 PF00994 Probable molybdopterin binding domain HOO31_05255 PF03454 MoeA C-terminal region (domain IV) HOO31_05255 PF03453 MoeA N-terminal region (domain I and II) HOO31_05265 PF01171 PP-loop family HOO31_05285 PF01066 CDP-alcohol phosphatidyltransferase HOO31_05290 PF02541 Ppx/GppA phosphatase family HOO31_05300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HOO31_05300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HOO31_05300 PF00205 Thiamine pyrophosphate enzyme, central domain HOO31_05305 PF10369 Small subunit of acetolactate synthase HOO31_05310 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HOO31_05310 PF00132 Bacterial transferase hexapeptide (six repeats) HOO31_05315 PF17854 FtsK alpha domain HOO31_05315 PF09397 Ftsk gamma domain HOO31_05315 PF01580 FtsK/SpoIIIE family HOO31_05330 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HOO31_05330 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HOO31_05335 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HOO31_05335 PF01926 50S ribosome-binding GTPase HOO31_05340 PF01740 STAS domain HOO31_05340 PF00916 Sulfate permease family HOO31_05350 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HOO31_05350 PF02843 Phosphoribosylglycinamide synthetase, C domain HOO31_05350 PF02844 Phosphoribosylglycinamide synthetase, N domain HOO31_05360 PF04453 LPS transport system D HOO31_05360 PF03968 OstA-like protein HOO31_05370 PF00013 KH domain HOO31_05370 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HOO31_05370 PF01138 3' exoribonuclease family, domain 1 HOO31_05370 PF03725 3' exoribonuclease family, domain 2 HOO31_05370 PF00575 S1 RNA binding domain HOO31_05375 PF00072 Response regulator receiver domain HOO31_05380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_05380 PF02895 Signal transducing histidine kinase, homodimeric domain HOO31_05380 PF01627 Hpt domain HOO31_05380 PF01584 CheW-like domain HOO31_05380 PF09078 CheY binding HOO31_05385 PF01739 CheR methyltransferase, SAM binding domain HOO31_05385 PF03705 CheR methyltransferase, all-alpha domain HOO31_05390 PF03975 CheD chemotactic sensory transduction HOO31_05395 PF01339 CheB methylesterase HOO31_05395 PF00072 Response regulator receiver domain HOO31_05400 PF18644 Phage integrase SAM-like domain HOO31_05400 PF00589 Phage integrase family HOO31_05405 PF00684 DnaJ central domain HOO31_05405 PF00226 DnaJ domain HOO31_05405 PF01556 DnaJ C terminal domain HOO31_05425 PF00753 Metallo-beta-lactamase superfamily HOO31_05435 PF00990 Diguanylate cyclase, GGDEF domain HOO31_05435 PF00563 EAL domain HOO31_05435 PF01590 GAF domain HOO31_05435 PF00360 Phytochrome region HOO31_05440 PF08003 Protein of unknown function (DUF1698) HOO31_05445 PF00990 Diguanylate cyclase, GGDEF domain HOO31_05445 PF00072 Response regulator receiver domain HOO31_05450 PF01578 Cytochrome C assembly protein HOO31_05450 PF05140 ResB-like family HOO31_05455 PF01546 Peptidase family M20/M25/M40 HOO31_05455 PF07687 Peptidase dimerisation domain HOO31_05460 PF07730 Histidine kinase HOO31_05460 PF17200 Single Cache domain 2 HOO31_05470 PF03548 Outer membrane lipoprotein carrier protein LolA HOO31_05475 PF07517 SecA DEAD-like domain HOO31_05475 PF01043 SecA preprotein cross-linking domain HOO31_05475 PF00271 Helicase conserved C-terminal domain HOO31_05475 PF02810 SEC-C motif HOO31_05475 PF07516 SecA Wing and Scaffold domain HOO31_05480 PF02687 FtsX-like permease family HOO31_05480 PF12704 MacB-like periplasmic core domain HOO31_05485 PF00994 Probable molybdopterin binding domain HOO31_05495 PF17862 AAA+ lid domain HOO31_05495 PF06480 FtsH Extracellular HOO31_05495 PF01434 Peptidase family M41 HOO31_05495 PF00004 ATPase family associated with various cellular activities (AAA) HOO31_05500 PF04055 Radical SAM superfamily HOO31_05500 PF00919 Uncharacterized protein family UPF0004 HOO31_05510 PF01761 3-dehydroquinate synthase HOO31_05530 PF01032 FecCD transport family HOO31_05535 PF00005 ABC transporter HOO31_05540 PF01497 Periplasmic binding protein HOO31_05545 PF00593 TonB dependent receptor HOO31_05545 PF07715 TonB-dependent Receptor Plug Domain HOO31_05565 PF13419 Haloacid dehalogenase-like hydrolase HOO31_05570 PF00849 RNA pseudouridylate synthase HOO31_05570 PF01479 S4 domain HOO31_05575 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HOO31_05585 PF08534 Redoxin HOO31_05600 PF02600 Disulfide bond formation protein DsbB HOO31_05610 PF00497 Bacterial extracellular solute-binding proteins, family 3 HOO31_05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_05610 PF00512 His Kinase A (phospho-acceptor) domain HOO31_05620 PF02254 TrkA-N domain HOO31_05620 PF00999 Sodium/hydrogen exchanger family HOO31_05645 PF00211 Adenylate and Guanylate cyclase catalytic domain HOO31_05650 PF01966 HD domain HOO31_05650 PF00072 Response regulator receiver domain HOO31_05655 PF00155 Aminotransferase class I and II HOO31_05675 PF02910 Fumarate reductase flavoprotein C-term HOO31_05675 PF00890 FAD binding domain HOO31_05680 PF02540 NAD synthase HOO31_05680 PF00117 Glutamine amidotransferase class-I HOO31_05680 PF00958 GMP synthase C terminal domain HOO31_05690 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HOO31_05700 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HOO31_05715 PF00561 alpha/beta hydrolase fold HOO31_05730 PF00563 EAL domain HOO31_05730 PF00990 Diguanylate cyclase, GGDEF domain HOO31_05730 PF08448 PAS fold HOO31_05735 PF17760 UvrA interaction domain HOO31_05735 PF17755 UvrA DNA-binding domain HOO31_05735 PF00005 ABC transporter HOO31_05740 PF01118 Semialdehyde dehydrogenase, NAD binding domain HOO31_05745 PF01420 Type I restriction modification DNA specificity domain HOO31_05755 PF12161 HsdM N-terminal domain HOO31_05755 PF02384 N-6 DNA Methylase HOO31_05760 PF02661 Fic/DOC family HOO31_05760 PF13784 Fic/DOC family N-terminal HOO31_05775 PF04851 Type III restriction enzyme, res subunit HOO31_05775 PF08463 EcoEI R protein C-terminal HOO31_05775 PF00271 Helicase conserved C-terminal domain HOO31_05775 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) HOO31_05780 PF03441 FAD binding domain of DNA photolyase HOO31_05780 PF00875 DNA photolyase HOO31_05785 PF08338 Domain of unknown function (DUF1731) HOO31_05785 PF01370 NAD dependent epimerase/dehydratase family HOO31_05795 PF08212 Lipocalin-like domain HOO31_05800 PF00762 Ferrochelatase HOO31_05815 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HOO31_05830 PF03109 ABC1 family HOO31_05840 PF00563 EAL domain HOO31_05840 PF12792 CSS motif domain associated with EAL HOO31_05845 PF04397 LytTr DNA-binding domain HOO31_05845 PF00072 Response regulator receiver domain HOO31_05850 PF06580 Histidine kinase HOO31_05850 PF07694 5TMR of 5TMR-LYT HOO31_05850 PF13492 GAF domain HOO31_05850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_05870 PF01699 Sodium/calcium exchanger protein HOO31_05875 PF00476 DNA polymerase family A HOO31_05875 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HOO31_05875 PF01367 5'-3' exonuclease, C-terminal SAM fold HOO31_05880 PF18073 Rubredoxin metal binding domain HOO31_05890 PF02130 Uncharacterized protein family UPF0054 HOO31_05895 PF01475 Ferric uptake regulator family HOO31_05905 PF03023 Lipid II flippase MurJ HOO31_05910 PF00664 ABC transporter transmembrane region HOO31_05910 PF00005 ABC transporter HOO31_05915 PF01180 Dihydroorotate dehydrogenase HOO31_05920 PF00675 Insulinase (Peptidase family M16) HOO31_05920 PF05193 Peptidase M16 inactive domain HOO31_05925 PF00701 Dihydrodipicolinate synthetase family HOO31_05935 PF01066 CDP-alcohol phosphatidyltransferase HOO31_05940 PF17820 PDZ domain HOO31_05940 PF02163 Peptidase family M50 HOO31_05945 PF01168 Alanine racemase, N-terminal domain HOO31_05950 PF00672 HAMP domain HOO31_05950 PF02203 Tar ligand binding domain homologue HOO31_05950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_05955 PF08447 PAS fold HOO31_05955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_05965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_05970 PF00072 Response regulator receiver domain HOO31_05970 PF00486 Transcriptional regulatory protein, C terminal HOO31_05980 PF00664 ABC transporter transmembrane region HOO31_05980 PF00005 ABC transporter HOO31_05985 PF01709 Transcriptional regulator HOO31_06005 PF03641 Possible lysine decarboxylase HOO31_06010 PF13419 Haloacid dehalogenase-like hydrolase HOO31_06030 PF02581 Thiamine monophosphate synthase HOO31_06030 PF08543 Phosphomethylpyrimidine kinase HOO31_06035 PF00171 Aldehyde dehydrogenase family HOO31_06055 PF00795 Carbon-nitrogen hydrolase HOO31_06070 PF00501 AMP-binding enzyme HOO31_06070 PF13193 AMP-binding enzyme C-terminal domain HOO31_06075 PF03062 MBOAT, membrane-bound O-acyltransferase family HOO31_06090 PF00550 Phosphopantetheine attachment site HOO31_06095 PF00132 Bacterial transferase hexapeptide (six repeats) HOO31_06115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_06115 PF00672 HAMP domain HOO31_06115 PF13426 PAS domain HOO31_06115 PF00512 His Kinase A (phospho-acceptor) domain HOO31_06120 PF00486 Transcriptional regulatory protein, C terminal HOO31_06120 PF00072 Response regulator receiver domain HOO31_06145 PF05525 Branched-chain amino acid transport protein HOO31_06150 PF00588 SpoU rRNA Methylase family HOO31_06155 PF01842 ACT domain HOO31_06155 PF00551 Formyl transferase HOO31_06160 PF02578 Multi-copper polyphenol oxidoreductase laccase HOO31_06170 PF08501 Shikimate dehydrogenase substrate binding domain HOO31_06175 PF00196 Bacterial regulatory proteins, luxR family HOO31_06175 PF17874 MalT-like TPR region HOO31_06180 PF13533 Biotin-lipoyl like HOO31_06185 PF03412 Peptidase C39 family HOO31_06185 PF00664 ABC transporter transmembrane region HOO31_06185 PF00005 ABC transporter HOO31_06195 PF00270 DEAD/DEAH box helicase HOO31_06195 PF00271 Helicase conserved C-terminal domain HOO31_06205 PF03738 Glutathionylspermidine synthase preATP-grasp HOO31_06210 PF02203 Tar ligand binding domain homologue HOO31_06210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_06210 PF00672 HAMP domain HOO31_06215 PF00672 HAMP domain HOO31_06215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_06215 PF02203 Tar ligand binding domain homologue HOO31_06220 PF03120 NAD-dependent DNA ligase OB-fold domain HOO31_06220 PF12826 Helix-hairpin-helix motif HOO31_06220 PF00533 BRCA1 C Terminus (BRCT) domain HOO31_06220 PF01653 NAD-dependent DNA ligase adenylation domain HOO31_06225 PF00478 IMP dehydrogenase / GMP reductase domain HOO31_06225 PF00571 CBS domain HOO31_06230 PF01425 Amidase HOO31_06235 PF01196 Ribosomal protein L17 HOO31_06240 PF01000 RNA polymerase Rpb3/RpoA insert domain HOO31_06240 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HOO31_06240 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HOO31_06245 PF00163 Ribosomal protein S4/S9 N-terminal domain HOO31_06245 PF01479 S4 domain HOO31_06250 PF00411 Ribosomal protein S11 HOO31_06255 PF00416 Ribosomal protein S13/S18 HOO31_06260 PF00444 Ribosomal protein L36 HOO31_06275 PF00180 Isocitrate/isopropylmalate dehydrogenase HOO31_06280 PF00694 Aconitase C-terminal domain HOO31_06285 PF04545 Sigma-70, region 4 HOO31_06285 PF04539 Sigma-70 region 3 HOO31_06285 PF04542 Sigma-70 region 2 HOO31_06285 PF00140 Sigma-70 factor, region 1.2 HOO31_06290 PF00589 Phage integrase family HOO31_06290 PF02899 Phage integrase, N-terminal SAM-like domain HOO31_06325 PF02092 Glycyl-tRNA synthetase beta subunit HOO31_06345 PF02527 rRNA small subunit methyltransferase G HOO31_06350 PF00925 GTP cyclohydrolase II HOO31_06355 PF00490 Delta-aminolevulinic acid dehydratase HOO31_06385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HOO31_06385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HOO31_06385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HOO31_06385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HOO31_06390 PF00483 Nucleotidyl transferase HOO31_06395 PF00342 Phosphoglucose isomerase HOO31_06410 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HOO31_06435 PF02719 Polysaccharide biosynthesis protein HOO31_06440 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HOO31_06450 PF00953 Glycosyl transferase family 4 HOO31_06455 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HOO31_06465 PF01370 NAD dependent epimerase/dehydratase family HOO31_06480 PF13439 Glycosyltransferase Family 4 HOO31_06480 PF00534 Glycosyl transferases group 1 HOO31_06485 PF00535 Glycosyl transferase family 2 HOO31_06490 PF13439 Glycosyltransferase Family 4 HOO31_06490 PF00534 Glycosyl transferases group 1 HOO31_06505 PF00733 Asparagine synthase HOO31_06505 PF13537 Glutamine amidotransferase domain HOO31_06515 PF13439 Glycosyltransferase Family 4 HOO31_06515 PF00534 Glycosyl transferases group 1 HOO31_06525 PF00535 Glycosyl transferase family 2 HOO31_06530 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HOO31_06535 PF16363 GDP-mannose 4,6 dehydratase HOO31_06540 PF16363 GDP-mannose 4,6 dehydratase HOO31_06545 PF00483 Nucleotidyl transferase HOO31_06550 PF00483 Nucleotidyl transferase HOO31_06550 PF01050 Mannose-6-phosphate isomerase HOO31_06555 PF01370 NAD dependent epimerase/dehydratase family HOO31_06560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HOO31_06560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HOO31_06560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HOO31_06580 PF02661 Fic/DOC family HOO31_06580 PF12728 Helix-turn-helix domain HOO31_06595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HOO31_06595 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HOO31_06595 PF02142 MGS-like domain HOO31_06605 PF00561 alpha/beta hydrolase fold HOO31_06615 PF04143 Sulphur transport HOO31_06620 PF12327 FtsZ family, C-terminal domain HOO31_06620 PF00091 Tubulin/FtsZ family, GTPase domain HOO31_06625 PF02491 SHS2 domain inserted in FTSA HOO31_06635 PF14490 Helix-hairpin-helix containing domain HOO31_06635 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HOO31_06635 PF13538 UvrD-like helicase C-terminal domain HOO31_06645 PF00817 impB/mucB/samB family HOO31_06645 PF11799 impB/mucB/samB family C-terminal domain HOO31_06645 PF11798 IMS family HHH motif HOO31_06655 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding HOO31_06655 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO31_06655 PF10518 TAT (twin-arginine translocation) pathway signal sequence HOO31_06660 PF00005 ABC transporter HOO31_06660 PF12848 ABC transporter HOO31_06660 PF16326 ABC transporter C-terminal domain HOO31_06665 PF04055 Radical SAM superfamily HOO31_06675 PF17831 Pyruvate dehydrogenase E1 component middle domain HOO31_06675 PF00456 Transketolase, thiamine diphosphate binding domain HOO31_06680 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HOO31_06680 PF00364 Biotin-requiring enzyme HOO31_06680 PF02817 e3 binding domain HOO31_06685 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO31_06685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HOO31_06695 PF00403 Heavy-metal-associated domain HOO31_06700 PF00271 Helicase conserved C-terminal domain HOO31_06700 PF00270 DEAD/DEAH box helicase HOO31_06715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_06715 PF00672 HAMP domain HOO31_06715 PF02203 Tar ligand binding domain homologue HOO31_06720 PF00075 RNase H HOO31_06725 PF00682 HMGL-like HOO31_06735 PF01312 FlhB HrpN YscU SpaS Family HOO31_06745 PF00583 Acetyltransferase (GNAT) family HOO31_06750 PF01926 50S ribosome-binding GTPase HOO31_06770 PF00475 Imidazoleglycerol-phosphate dehydratase HOO31_06775 PF05036 Sporulation related domain HOO31_06775 PF03330 Lytic transglycolase HOO31_06785 PF01026 TatD related DNase HOO31_06795 PF07724 AAA domain (Cdc48 subfamily) HOO31_06795 PF10431 C-terminal, D2-small domain, of ClpB protein HOO31_06800 PF00227 Proteasome subunit HOO31_06805 PF03948 Ribosomal protein L9, C-terminal domain HOO31_06805 PF01281 Ribosomal protein L9, N-terminal domain HOO31_06815 PF02441 Flavoprotein HOO31_06820 PF01467 Cytidylyltransferase-like HOO31_06825 PF02223 Thymidylate kinase HOO31_06830 PF13393 Histidyl-tRNA synthetase HOO31_06830 PF03129 Anticodon binding domain HOO31_06835 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HOO31_06835 PF17944 Arginine decarboxylase C-terminal helical extension HOO31_06835 PF17810 Arginine decarboxylase helical bundle domain HOO31_06840 PF00132 Bacterial transferase hexapeptide (six repeats) HOO31_06840 PF06426 Serine acetyltransferase, N-terminal HOO31_06845 PF01925 Sulfite exporter TauE/SafE HOO31_06860 PF06865 Pyrimidine/purine nucleoside phosphorylase HOO31_06875 PF08668 HDOD domain HOO31_06880 PF06071 Protein of unknown function (DUF933) HOO31_06880 PF01926 50S ribosome-binding GTPase HOO31_06895 PF00085 Thioredoxin HOO31_06900 PF00578 AhpC/TSA family HOO31_06900 PF10417 C-terminal domain of 1-Cys peroxiredoxin HOO31_06905 PF00672 HAMP domain HOO31_06905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_06905 PF02203 Tar ligand binding domain homologue HOO31_06910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_06910 PF00672 HAMP domain HOO31_06910 PF00512 His Kinase A (phospho-acceptor) domain HOO31_06910 PF01627 Hpt domain HOO31_06910 PF00072 Response regulator receiver domain HOO31_06910 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HOO31_06915 PF00072 Response regulator receiver domain HOO31_06920 PF00990 Diguanylate cyclase, GGDEF domain HOO31_06920 PF08448 PAS fold HOO31_06925 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HOO31_06925 PF01627 Hpt domain HOO31_06925 PF00672 HAMP domain HOO31_06925 PF00072 Response regulator receiver domain HOO31_06925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_06925 PF00512 His Kinase A (phospho-acceptor) domain HOO31_06930 PF03601 Conserved hypothetical protein 698 HOO31_06935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO31_06935 PF03466 LysR substrate binding domain HOO31_06940 PF00891 O-methyltransferase domain HOO31_06945 PF08386 TAP-like protein HOO31_06945 PF00561 alpha/beta hydrolase fold HOO31_06960 PF02801 Beta-ketoacyl synthase, C-terminal domain HOO31_06960 PF00109 Beta-ketoacyl synthase, N-terminal domain HOO31_06970 PF00550 Phosphopantetheine attachment site HOO31_06990 PF00221 Aromatic amino acid lyase HOO31_07025 PF00005 ABC transporter HOO31_07040 PF02801 Beta-ketoacyl synthase, C-terminal domain HOO31_07040 PF00109 Beta-ketoacyl synthase, N-terminal domain HOO31_07060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HOO31_07060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HOO31_07075 PF04055 Radical SAM superfamily HOO31_07075 PF08497 Radical SAM N-terminal HOO31_07085 PF01336 OB-fold nucleic acid binding domain HOO31_07085 PF02938 GAD domain HOO31_07085 PF00152 tRNA synthetases class II (D, K and N) HOO31_07095 PF03167 Uracil DNA glycosylase superfamily HOO31_07100 PF01176 Translation initiation factor 1A / IF-1 HOO31_07105 PF00557 Metallopeptidase family M24 HOO31_07110 PF00344 SecY translocase HOO31_07115 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HOO31_07120 PF03719 Ribosomal protein S5, C-terminal domain HOO31_07120 PF00333 Ribosomal protein S5, N-terminal domain HOO31_07125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HOO31_07130 PF00347 Ribosomal protein L6 HOO31_07135 PF00410 Ribosomal protein S8 HOO31_07140 PF00253 Ribosomal protein S14p/S29e HOO31_07145 PF00281 Ribosomal protein L5 HOO31_07145 PF00673 ribosomal L5P family C-terminus HOO31_07150 PF00467 KOW motif HOO31_07150 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HOO31_07155 PF00238 Ribosomal protein L14p/L23e HOO31_07160 PF00366 Ribosomal protein S17 HOO31_07165 PF00831 Ribosomal L29 protein HOO31_07170 PF00252 Ribosomal protein L16p/L10e HOO31_07175 PF07650 KH domain HOO31_07175 PF00189 Ribosomal protein S3, C-terminal domain HOO31_07180 PF00237 Ribosomal protein L22p/L17e HOO31_07185 PF00203 Ribosomal protein S19 HOO31_07190 PF03947 Ribosomal Proteins L2, C-terminal domain HOO31_07190 PF00181 Ribosomal Proteins L2, RNA binding domain HOO31_07195 PF00276 Ribosomal protein L23 HOO31_07200 PF00573 Ribosomal protein L4/L1 family HOO31_07205 PF00297 Ribosomal protein L3 HOO31_07210 PF00338 Ribosomal protein S10p/S20e HOO31_07230 PF03372 Endonuclease/Exonuclease/phosphatase family HOO31_07235 PF02568 Thiamine biosynthesis protein (ThiI) HOO31_07235 PF02926 THUMP domain HOO31_07255 PF01078 Magnesium chelatase, subunit ChlI HOO31_07255 PF13335 Magnesium chelatase, subunit ChlI C-terminal HOO31_07260 PF00672 HAMP domain HOO31_07260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_07260 PF02203 Tar ligand binding domain homologue HOO31_07265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_07265 PF08447 PAS fold HOO31_07275 PF01327 Polypeptide deformylase HOO31_07280 PF00574 Clp protease HOO31_07285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HOO31_07285 PF05698 Bacterial trigger factor protein (TF) C-terminus HOO31_07285 PF05697 Bacterial trigger factor protein (TF) HOO31_07290 PF03976 Polyphosphate kinase 2 (PPK2) HOO31_07295 PF03976 Polyphosphate kinase 2 (PPK2) HOO31_07300 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HOO31_07305 PF03435 Saccharopine dehydrogenase NADP binding domain HOO31_07305 PF16653 Saccharopine dehydrogenase C-terminal domain HOO31_07315 PF02698 DUF218 domain HOO31_07320 PF01875 Memo-like protein HOO31_07335 PF00034 Cytochrome c HOO31_07340 PF00115 Cytochrome C and Quinol oxidase polypeptide I HOO31_07350 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HOO31_07355 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HOO31_07370 PF04055 Radical SAM superfamily HOO31_07370 PF13186 Iron-sulfur cluster-binding domain HOO31_07380 PF14824 Sirohaem biosynthesis protein central HOO31_07380 PF10414 Sirohaem synthase dimerisation region HOO31_07380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HOO31_07390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HOO31_07390 PF14824 Sirohaem biosynthesis protein central HOO31_07390 PF10414 Sirohaem synthase dimerisation region HOO31_07395 PF17805 AsnC-like ligand binding domain HOO31_07410 PF00762 Ferrochelatase HOO31_07415 PF00005 ABC transporter HOO31_07425 PF00313 'Cold-shock' DNA-binding domain HOO31_07430 PF00149 Calcineurin-like phosphoesterase HOO31_07440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HOO31_07440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HOO31_07440 PF02770 Acyl-CoA dehydrogenase, middle domain HOO31_07465 PF00403 Heavy-metal-associated domain HOO31_07470 PF08495 FIST N domain HOO31_07470 PF00563 EAL domain HOO31_07470 PF10442 FIST C domain HOO31_07470 PF00990 Diguanylate cyclase, GGDEF domain HOO31_07475 PF00625 Guanylate kinase HOO31_07485 PF00005 ABC transporter HOO31_07490 PF00889 Elongation factor TS HOO31_07495 PF00318 Ribosomal protein S2 HOO31_07500 PF02875 Mur ligase family, glutamate ligase domain HOO31_07500 PF08245 Mur ligase middle domain HOO31_07515 PF00133 tRNA synthetases class I (I, L, M and V) HOO31_07515 PF08264 Anticodon-binding domain of tRNA HOO31_07520 PF06039 Malate:quinone oxidoreductase (Mqo) HOO31_07525 PF02464 Competence-damaged protein HOO31_07525 PF18146 Damage-inducible protein CinA KH domain HOO31_07525 PF00994 Probable molybdopterin binding domain HOO31_07570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_07570 PF00512 His Kinase A (phospho-acceptor) domain HOO31_07575 PF00072 Response regulator receiver domain HOO31_07575 PF00486 Transcriptional regulatory protein, C terminal HOO31_07585 PF00474 Sodium:solute symporter family HOO31_07595 PF07733 Bacterial DNA polymerase III alpha NTPase domain HOO31_07595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HOO31_07595 PF14579 Helix-hairpin-helix motif HOO31_07595 PF02811 PHP domain HOO31_07595 PF00929 Exonuclease HOO31_07595 PF11490 DNA polymerase III polC-type N-terminus II HOO31_07605 PF00474 Sodium:solute symporter family HOO31_07615 PF00474 Sodium:solute symporter family HOO31_07625 PF07733 Bacterial DNA polymerase III alpha NTPase domain HOO31_07625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HOO31_07625 PF02811 PHP domain HOO31_07625 PF00929 Exonuclease HOO31_07625 PF14579 Helix-hairpin-helix motif HOO31_07635 PF00871 Acetokinase family HOO31_07640 PF01515 Phosphate acetyl/butaryl transferase HOO31_07645 PF00871 Acetokinase family HOO31_07650 PF01343 Peptidase family S49 HOO31_07655 PF01979 Amidohydrolase family HOO31_07660 PF01220 Dehydroquinase class II HOO31_07665 PF00557 Metallopeptidase family M24 HOO31_07665 PF01321 Creatinase/Prolidase N-terminal domain HOO31_07670 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HOO31_07690 PF14572 Phosphoribosyl synthetase-associated domain HOO31_07690 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HOO31_07695 PF00691 OmpA family HOO31_07695 PF05736 OprF membrane domain HOO31_07700 PF00679 Elongation factor G C-terminus HOO31_07700 PF00009 Elongation factor Tu GTP binding domain HOO31_07700 PF03144 Elongation factor Tu domain 2 HOO31_07700 PF06421 GTP-binding protein LepA C-terminus HOO31_07705 PF00156 Phosphoribosyl transferase domain HOO31_07710 PF00117 Glutamine amidotransferase class-I HOO31_07715 PF00977 Histidine biosynthesis protein HOO31_07720 PF00990 Diguanylate cyclase, GGDEF domain HOO31_07720 PF00072 Response regulator receiver domain HOO31_07730 PF01914 MarC family integral membrane protein HOO31_07735 PF01624 MutS domain I HOO31_07735 PF05188 MutS domain II HOO31_07735 PF05192 MutS domain III HOO31_07735 PF05190 MutS family domain IV HOO31_07735 PF00488 MutS domain V HOO31_07750 PF00682 HMGL-like HOO31_07750 PF08502 LeuA allosteric (dimerisation) domain HOO31_07755 PF17862 AAA+ lid domain HOO31_07755 PF01434 Peptidase family M41 HOO31_07755 PF00004 ATPase family associated with various cellular activities (AAA) HOO31_07765 PF01207 Dihydrouridine synthase (Dus) HOO31_07775 PF02590 Predicted SPOUT methyltransferase HOO31_07780 PF02581 Thiamine monophosphate synthase HOO31_07785 PF01039 Carboxyl transferase domain HOO31_07785 PF17848 Acetyl-coA carboxylase zinc finger domain HOO31_07790 PF00438 S-adenosylmethionine synthetase, N-terminal domain HOO31_07790 PF02773 S-adenosylmethionine synthetase, C-terminal domain HOO31_07790 PF02772 S-adenosylmethionine synthetase, central domain HOO31_07795 PF01380 SIS domain HOO31_07800 PF00459 Inositol monophosphatase family HOO31_07810 PF00672 HAMP domain HOO31_07810 PF02203 Tar ligand binding domain homologue HOO31_07810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_07875 PF02789 Cytosol aminopeptidase family, N-terminal domain HOO31_07875 PF00883 Cytosol aminopeptidase family, catalytic domain HOO31_07885 PF00291 Pyridoxal-phosphate dependent enzyme HOO31_07890 PF00156 Phosphoribosyl transferase domain HOO31_07895 PF01068 ATP dependent DNA ligase domain HOO31_07895 PF14743 DNA ligase OB-like domain HOO31_07905 PF01053 Cys/Met metabolism PLP-dependent enzyme HOO31_07910 PF01053 Cys/Met metabolism PLP-dependent enzyme HOO31_07935 PF06965 Na+/H+ antiporter 1 HOO31_07975 PF00696 Amino acid kinase family HOO31_07980 PF01192 RNA polymerase Rpb6 HOO31_07985 PF02824 TGS domain HOO31_07985 PF04607 Region found in RelA / SpoT proteins HOO31_07985 PF13291 ACT domain HOO31_07990 PF01479 S4 domain HOO31_07990 PF00579 tRNA synthetases class I (W and Y) HOO31_08000 PF01520 N-acetylmuramoyl-L-alanine amidase HOO31_08015 PF01195 Peptidyl-tRNA hydrolase HOO31_08020 PF01386 Ribosomal L25p family HOO31_08020 PF14693 Ribosomal protein TL5, C-terminal domain HOO31_08025 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HOO31_08025 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HOO31_08030 PF10502 Signal peptidase, peptidase S26 HOO31_08035 PF02502 Ribose/Galactose Isomerase HOO31_08075 PF00563 EAL domain HOO31_08075 PF08495 FIST N domain HOO31_08075 PF00990 Diguanylate cyclase, GGDEF domain HOO31_08075 PF10442 FIST C domain HOO31_08080 PF01243 Pyridoxamine 5'-phosphate oxidase HOO31_08080 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HOO31_08085 PF16916 Dimerisation domain of Zinc Transporter HOO31_08085 PF01545 Cation efflux family HOO31_08090 PF03707 Bacterial signalling protein N terminal repeat HOO31_08090 PF00990 Diguanylate cyclase, GGDEF domain HOO31_08090 PF00563 EAL domain HOO31_08095 PF03880 DbpA RNA binding domain HOO31_08095 PF00270 DEAD/DEAH box helicase HOO31_08095 PF00271 Helicase conserved C-terminal domain HOO31_08125 PF00183 Hsp90 protein HOO31_08135 PF00491 Arginase family HOO31_08140 PF00005 ABC transporter HOO31_08145 PF00528 Binding-protein-dependent transport system inner membrane component HOO31_08150 PF00528 Binding-protein-dependent transport system inner membrane component HOO31_08155 PF12849 PBP superfamily domain HOO31_08165 PF08713 DNA alkylation repair enzyme HOO31_08170 PF04073 Aminoacyl-tRNA editing domain HOO31_08205 PF04403 Paraquat-inducible protein A HOO31_08210 PF02470 MlaD protein HOO31_08215 PF00199 Catalase HOO31_08215 PF06628 Catalase-related immune-responsive HOO31_08220 PF00023 Ankyrin repeat HOO31_08220 PF12796 Ankyrin repeats (3 copies) HOO31_08230 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HOO31_08230 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HOO31_08235 PF00682 HMGL-like HOO31_08235 PF08502 LeuA allosteric (dimerisation) domain HOO31_08240 PF12833 Helix-turn-helix domain HOO31_08240 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HOO31_08245 PF13673 Acetyltransferase (GNAT) domain HOO31_08245 PF13302 Acetyltransferase (GNAT) domain HOO31_08245 PF03352 Methyladenine glycosylase HOO31_08245 PF00117 Glutamine amidotransferase class-I HOO31_08245 PF00958 GMP synthase C terminal domain HOO31_08250 PF00271 Helicase conserved C-terminal domain HOO31_08260 PF00924 Mechanosensitive ion channel HOO31_08265 PF01368 DHH family HOO31_08265 PF02833 DHHA2 domain HOO31_08270 PF02810 SEC-C motif HOO31_08280 PF00206 Lyase HOO31_08280 PF10415 Fumarase C C-terminus HOO31_08285 PF01048 Phosphorylase superfamily HOO31_08290 PF00698 Acyl transferase domain HOO31_08295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HOO31_08310 PF04052 TolB amino-terminal domain HOO31_08320 PF02472 Biopolymer transport protein ExbD/TolR HOO31_08325 PF01618 MotA/TolQ/ExbB proton channel family HOO31_08330 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HOO31_08335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HOO31_08335 PF02874 ATP synthase alpha/beta family, beta-barrel domain HOO31_08340 PF00231 ATP synthase HOO31_08345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HOO31_08345 PF00306 ATP synthase alpha/beta chain, C terminal domain HOO31_08345 PF02874 ATP synthase alpha/beta family, beta-barrel domain HOO31_08350 PF00213 ATP synthase delta (OSCP) subunit HOO31_08355 PF00430 ATP synthase B/B' CF(0) HOO31_08365 PF17762 HTH domain found in ParB protein HOO31_08365 PF02195 ParB-like nuclease domain HOO31_08370 PF13614 AAA domain HOO31_08385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_08385 PF08447 PAS fold HOO31_08390 PF02911 Formyl transferase, C-terminal domain HOO31_08390 PF00551 Formyl transferase HOO31_08395 PF00696 Amino acid kinase family HOO31_08400 PF01018 GTP1/OBG HOO31_08400 PF01926 50S ribosome-binding GTPase HOO31_08405 PF01016 Ribosomal L27 protein HOO31_08410 PF00829 Ribosomal prokaryotic L21 protein HOO31_08415 PF16730 DnaG-primase C-terminal, helicase-binding domain HOO31_08415 PF13662 Toprim domain HOO31_08415 PF08275 DNA primase catalytic core, N-terminal domain HOO31_08415 PF01807 CHC2 zinc finger HOO31_08425 PF00035 Double-stranded RNA binding motif HOO31_08425 PF14622 Ribonuclease-III-like HOO31_08430 PF01264 Chorismate synthase HOO31_08440 PF03976 Polyphosphate kinase 2 (PPK2) HOO31_08455 PF01625 Peptide methionine sulfoxide reductase HOO31_08465 PF00202 Aminotransferase class-III HOO31_08470 PF08447 PAS fold HOO31_08470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_08470 PF08448 PAS fold HOO31_08475 PF01808 AICARFT/IMPCHase bienzyme HOO31_08475 PF02142 MGS-like domain HOO31_08480 PF00586 AIR synthase related protein, N-terminal domain HOO31_08480 PF02769 AIR synthase related protein, C-terminal domain HOO31_08480 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HOO31_08490 PF01551 Peptidase family M23 HOO31_08490 PF10145 Phage-related minor tail protein HOO31_08490 PF01464 Transglycosylase SLT domain HOO31_08495 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HOO31_08495 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HOO31_08510 PF17674 HHH domain HOO31_08510 PF09371 Tex-like protein N-terminal domain HOO31_08510 PF16921 Tex protein YqgF-like domain HOO31_08510 PF00575 S1 RNA binding domain HOO31_08515 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HOO31_08520 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HOO31_08525 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HOO31_08530 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HOO31_08530 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HOO31_08540 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HOO31_08540 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HOO31_08540 PF10531 SLBB domain HOO31_08545 PF00285 Citrate synthase, C-terminal domain HOO31_08550 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal HOO31_08550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HOO31_08550 PF00384 Molybdopterin oxidoreductase HOO31_08555 PF00146 NADH dehydrogenase HOO31_08560 PF12838 4Fe-4S dicluster domain HOO31_08565 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HOO31_08570 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HOO31_08575 PF00361 Proton-conducting membrane transporter HOO31_08575 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HOO31_08580 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HOO31_08580 PF00361 Proton-conducting membrane transporter HOO31_08585 PF00361 Proton-conducting membrane transporter HOO31_08590 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HOO31_08595 PF02910 Fumarate reductase flavoprotein C-term HOO31_08595 PF00890 FAD binding domain HOO31_08600 PF13085 2Fe-2S iron-sulfur cluster binding domain HOO31_08600 PF13183 4Fe-4S dicluster domain HOO31_08605 PF00350 Dynamin family HOO31_08610 PF00350 Dynamin family HOO31_08620 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HOO31_08620 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HOO31_08625 PF02504 Fatty acid synthesis protein HOO31_08630 PF01783 Ribosomal L32p protein family HOO31_08640 PF00334 Nucleoside diphosphate kinase HOO31_08650 PF00578 AhpC/TSA family HOO31_08650 PF10417 C-terminal domain of 1-Cys peroxiredoxin HOO31_08655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HOO31_08655 PF07498 Rho termination factor, N-terminal domain HOO31_08655 PF07497 Rho termination factor, RNA-binding domain HOO31_08660 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HOO31_08660 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HOO31_08665 PF01177 Asp/Glu/Hydantoin racemase HOO31_08670 PF12169 DNA polymerase III subunits gamma and tau domain III HOO31_08670 PF12170 DNA polymerase III tau subunit V interacting with alpha HOO31_08680 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HOO31_08680 PF03900 Porphobilinogen deaminase, C-terminal domain HOO31_08685 PF00857 Isochorismatase family HOO31_08710 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HOO31_08710 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HOO31_08725 PF00115 Cytochrome C and Quinol oxidase polypeptide I HOO31_08730 PF01668 SmpB protein HOO31_08735 PF00288 GHMP kinases N terminal domain HOO31_08740 PF01509 TruB family pseudouridylate synthase (N terminal domain) HOO31_08745 PF00580 UvrD/REP helicase N-terminal domain HOO31_08745 PF13361 UvrD-like helicase C-terminal domain HOO31_08750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HOO31_08750 PF03466 LysR substrate binding domain HOO31_08755 PF04055 Radical SAM superfamily HOO31_08755 PF16199 Radical_SAM C-terminal domain HOO31_08760 PF13537 Glutamine amidotransferase domain HOO31_08760 PF00156 Phosphoribosyl transferase domain HOO31_08765 PF05173 Dihydrodipicolinate reductase, C-terminus HOO31_08765 PF01113 Dihydrodipicolinate reductase, N-terminus HOO31_08770 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO31_08775 PF00085 Thioredoxin HOO31_08780 PF02272 DHHA1 domain HOO31_08780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HOO31_08780 PF01411 tRNA synthetases class II (A) HOO31_08810 PF00072 Response regulator receiver domain HOO31_08810 PF00486 Transcriptional regulatory protein, C terminal HOO31_08815 PF13180 PDZ domain HOO31_08815 PF17820 PDZ domain HOO31_08820 PF00920 Dehydratase family HOO31_08850 PF00005 ABC transporter HOO31_08850 PF09383 NIL domain HOO31_08870 PF01142 tRNA pseudouridine synthase D (TruD) HOO31_08885 PF13180 PDZ domain HOO31_08885 PF03572 Peptidase family S41 HOO31_08890 PF01259 SAICAR synthetase HOO31_08895 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase HOO31_08910 PF01553 Acyltransferase HOO31_08915 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HOO31_08920 PF02416 mttA/Hcf106 family HOO31_08925 PF02416 mttA/Hcf106 family HOO31_08930 PF03485 Arginyl tRNA synthetase N terminal domain HOO31_08930 PF00750 tRNA synthetases class I (R) HOO31_08930 PF05746 DALR anticodon binding domain HOO31_08940 PF01467 Cytidylyltransferase-like HOO31_08945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HOO31_08945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HOO31_08950 PF00162 Phosphoglycerate kinase HOO31_08955 PF00121 Triosephosphate isomerase HOO31_08965 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HOO31_08965 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HOO31_08970 PF01817 Chorismate mutase type II HOO31_08970 PF00800 Prephenate dehydratase HOO31_08970 PF01842 ACT domain HOO31_08975 PF00155 Aminotransferase class I and II HOO31_08980 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HOO31_08980 PF02779 Transketolase, pyrimidine binding domain HOO31_08980 PF02780 Transketolase, C-terminal domain HOO31_08985 PF03150 Di-haem cytochrome c peroxidase HOO31_08985 PF00034 Cytochrome c HOO31_08995 PF02545 Maf-like protein HOO31_09005 PF00877 NlpC/P60 family HOO31_09015 PF00939 Sodium:sulfate symporter transmembrane region HOO31_09025 PF11412 Disulphide bond corrector protein DsbC HOO31_09025 PF02683 Cytochrome C biogenesis protein transmembrane region HOO31_09025 PF00085 Thioredoxin HOO31_09030 PF00085 Thioredoxin HOO31_09035 PF18030 RimK PreATP-grasp domain HOO31_09035 PF08443 RimK-like ATP-grasp domain HOO31_09050 PF00990 Diguanylate cyclase, GGDEF domain HOO31_09050 PF10442 FIST C domain HOO31_09050 PF08495 FIST N domain HOO31_09050 PF00563 EAL domain HOO31_09055 PF02666 Phosphatidylserine decarboxylase HOO31_09065 PF04055 Radical SAM superfamily HOO31_09075 PF00484 Carbonic anhydrase HOO31_09080 PF00155 Aminotransferase class I and II HOO31_09085 PF02021 Uncharacterised protein family UPF0102 HOO31_09095 PF00391 PEP-utilising enzyme, mobile domain HOO31_09095 PF00224 Pyruvate kinase, barrel domain HOO31_09095 PF02887 Pyruvate kinase, alpha/beta domain HOO31_09105 PF00512 His Kinase A (phospho-acceptor) domain HOO31_09105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_09105 PF00672 HAMP domain HOO31_09105 PF13426 PAS domain HOO31_09110 PF00072 Response regulator receiver domain HOO31_09110 PF00486 Transcriptional regulatory protein, C terminal HOO31_09120 PF02561 Flagellar protein FliS HOO31_09135 PF02107 Flagellar L-ring protein HOO31_09160 PF01313 Bacterial export proteins, family 3 HOO31_09170 PF02119 Flagellar P-ring protein HOO31_09175 PF02154 Flagellar motor switch protein FliM HOO31_09175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HOO31_09185 PF00543 Nitrogen regulatory protein P-II HOO31_09190 PF00909 Ammonium Transporter Family HOO31_09195 PF12796 Ankyrin repeats (3 copies) HOO31_09195 PF13606 Ankyrin repeat HOO31_09200 PF01966 HD domain HOO31_09200 PF08335 GlnD PII-uridylyltransferase HOO31_09210 PF02040 Arsenical pump membrane protein HOO31_09225 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HOO31_09240 PF01451 Low molecular weight phosphotyrosine protein phosphatase HOO31_09250 PF00456 Transketolase, thiamine diphosphate binding domain HOO31_09250 PF02779 Transketolase, pyrimidine binding domain HOO31_09250 PF02780 Transketolase, C-terminal domain HOO31_09260 PF08448 PAS fold HOO31_09260 PF08447 PAS fold HOO31_09260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_09265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_09265 PF00672 HAMP domain HOO31_09265 PF02203 Tar ligand binding domain homologue HOO31_09285 PF00682 HMGL-like HOO31_09285 PF02436 Conserved carboxylase domain HOO31_09315 PF05690 Thiazole biosynthesis protein ThiG HOO31_09320 PF03091 CutA1 divalent ion tolerance protein HOO31_09325 PF03853 YjeF-related protein N-terminus HOO31_09325 PF01256 Carbohydrate kinase HOO31_09335 PF00814 Glycoprotease family HOO31_09350 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HOO31_09350 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HOO31_09350 PF13288 DXP reductoisomerase C-terminal domain HOO31_09380 PF03129 Anticodon binding domain HOO31_09380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HOO31_09380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HOO31_09385 PF00707 Translation initiation factor IF-3, C-terminal domain HOO31_09385 PF05198 Translation initiation factor IF-3, N-terminal domain HOO31_09390 PF01632 Ribosomal protein L35 HOO31_09395 PF00453 Ribosomal protein L20 HOO31_09405 PF07992 Pyridine nucleotide-disulphide oxidoreductase HOO31_09410 PF12804 MobA-like NTP transferase domain HOO31_09415 PF00330 Aconitase family (aconitate hydratase) HOO31_09420 PF03960 ArsC family HOO31_09430 PF03062 MBOAT, membrane-bound O-acyltransferase family HOO31_09440 PF04303 PrpF protein HOO31_09445 PF00330 Aconitase family (aconitate hydratase) HOO31_09445 PF00694 Aconitase C-terminal domain HOO31_09450 PF00285 Citrate synthase, C-terminal domain HOO31_09465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HOO31_09465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HOO31_09470 PF01474 Class-II DAHP synthetase family HOO31_09475 PF00923 Transaldolase/Fructose-6-phosphate aldolase HOO31_09490 PF03652 Holliday junction resolvase HOO31_09495 PF03616 Sodium/glutamate symporter HOO31_09515 PF01648 4'-phosphopantetheinyl transferase superfamily HOO31_09520 PF00528 Binding-protein-dependent transport system inner membrane component HOO31_09525 PF02569 Pantoate-beta-alanine ligase HOO31_09535 PF18693 TRAM domain HOO31_09535 PF00919 Uncharacterized protein family UPF0004 HOO31_09535 PF04055 Radical SAM superfamily HOO31_09540 PF01171 PP-loop family HOO31_09560 PF17969 L,D-transpeptidase C-terminal domain HOO31_09560 PF03734 L,D-transpeptidase catalytic domain HOO31_09570 PF03831 PhnA domain HOO31_09570 PF08274 PhnA Zinc-Ribbon HOO31_09575 PF12849 PBP superfamily domain HOO31_09580 PF00563 EAL domain HOO31_09580 PF00990 Diguanylate cyclase, GGDEF domain HOO31_09580 PF03707 Bacterial signalling protein N terminal repeat HOO31_09585 PF00528 Binding-protein-dependent transport system inner membrane component HOO31_09590 PF00528 Binding-protein-dependent transport system inner membrane component HOO31_09595 PF00005 ABC transporter HOO31_09600 PF01895 PhoU domain HOO31_09610 PF00486 Transcriptional regulatory protein, C terminal HOO31_09610 PF00072 Response regulator receiver domain HOO31_09615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_09615 PF16736 Single Cache-like HOO31_09615 PF00989 PAS fold HOO31_09615 PF00512 His Kinase A (phospho-acceptor) domain HOO31_09620 PF00572 Ribosomal protein L13 HOO31_09625 PF00380 Ribosomal protein S9/S16 HOO31_09630 PF03070 TENA/THI-4/PQQC family HOO31_09635 PF02110 Hydroxyethylthiazole kinase family HOO31_09640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HOO31_09645 PF13419 Haloacid dehalogenase-like hydrolase HOO31_09685 PF00005 ABC transporter HOO31_09685 PF09383 NIL domain HOO31_09690 PF02405 Permease MlaE HOO31_09695 PF02664 S-Ribosylhomocysteinase (LuxS) HOO31_09700 PF01266 FAD dependent oxidoreductase HOO31_09700 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HOO31_09705 PF07943 Penicillin-binding protein 5, C-terminal domain HOO31_09705 PF00768 D-alanyl-D-alanine carboxypeptidase HOO31_09715 PF13188 PAS domain HOO31_09715 PF13426 PAS domain HOO31_09715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_09715 PF00512 His Kinase A (phospho-acceptor) domain HOO31_09715 PF00989 PAS fold HOO31_09720 PF02310 B12 binding domain HOO31_09720 PF02607 B12 binding domain HOO31_09720 PF02574 Homocysteine S-methyltransferase HOO31_09720 PF00809 Pterin binding enzyme HOO31_09720 PF02965 Vitamin B12 dependent methionine synthase, activation domain HOO31_09730 PF01063 Amino-transferase class IV HOO31_09745 PF01502 Phosphoribosyl-AMP cyclohydrolase HOO31_09745 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HOO31_09760 PF00583 Acetyltransferase (GNAT) family HOO31_09765 PF00202 Aminotransferase class-III HOO31_09770 PF06339 Ectoine synthase HOO31_09775 PF05721 Phytanoyl-CoA dioxygenase (PhyH) HOO31_09785 PF01883 Iron-sulfur cluster assembly protein HOO31_09785 PF10609 NUBPL iron-transfer P-loop NTPase HOO31_09790 PF01964 Radical SAM ThiC family HOO31_09800 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HOO31_09800 PF02542 YgbB family HOO31_09810 PF04608 Phosphatidylglycerophosphatase A HOO31_09815 PF00472 RF-1 domain HOO31_09815 PF03462 PCRF domain HOO31_09820 PF01649 Ribosomal protein S20 HOO31_09825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HOO31_09825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HOO31_09825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HOO31_09825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HOO31_09830 PF01252 Signal peptidase (SPase) II HOO31_09835 PF00202 Aminotransferase class-III HOO31_09845 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HOO31_09845 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HOO31_09850 PF00425 chorismate binding enzyme HOO31_09855 PF01063 Amino-transferase class IV HOO31_09860 PF00117 Glutamine amidotransferase class-I HOO31_09860 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HOO31_09870 PF00709 Adenylosuccinate synthetase HOO31_09875 PF13393 Histidyl-tRNA synthetase HOO31_09880 PF00266 Aminotransferase class-V HOO31_09905 PF02678 Pirin HOO31_09905 PF17954 Quercetinase C-terminal cupin domain HOO31_09910 PF09962 Uncharacterized conserved protein (DUF2196) HOO31_09915 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HOO31_09915 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HOO31_09920 PF00586 AIR synthase related protein, N-terminal domain HOO31_09920 PF02769 AIR synthase related protein, C-terminal domain HOO31_09925 PF17284 Spermidine synthase tetramerisation domain HOO31_09930 PF01121 Dephospho-CoA kinase HOO31_09940 PF12801 4Fe-4S binding domain HOO31_09940 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HOO31_09940 PF13746 4Fe-4S dicluster domain HOO31_09945 PF06418 CTP synthase N-terminus HOO31_09945 PF00117 Glutamine amidotransferase class-I HOO31_09950 PF17768 RecJ OB domain HOO31_09950 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HOO31_09950 PF02272 DHHA1 domain HOO31_09950 PF01368 DHH family HOO31_09965 PF01965 DJ-1/PfpI family HOO31_09970 PF02811 PHP domain HOO31_09970 PF14579 Helix-hairpin-helix motif HOO31_09970 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HOO31_09970 PF07733 Bacterial DNA polymerase III alpha NTPase domain HOO31_09975 PF01975 Survival protein SurE HOO31_09990 PF01967 MoaC family HOO31_09995 PF01165 Ribosomal protein S21 HOO31_10000 PF02535 ZIP Zinc transporter HOO31_10005 PF02661 Fic/DOC family HOO31_10040 PF07669 Eco57I restriction-modification methylase HOO31_10050 PF01040 UbiA prenyltransferase family HOO31_10065 PF01197 Ribosomal protein L31 HOO31_10070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HOO31_10075 PF08032 RNA 2'-O ribose methyltransferase substrate binding HOO31_10075 PF00588 SpoU rRNA Methylase family HOO31_10085 PF00155 Aminotransferase class I and II HOO31_10090 PF00742 Homoserine dehydrogenase HOO31_10090 PF03447 Homoserine dehydrogenase, NAD binding domain HOO31_10090 PF01842 ACT domain HOO31_10095 PF00849 RNA pseudouridylate synthase HOO31_10100 PF00206 Lyase HOO31_10100 PF10397 Adenylosuccinate lyase C-terminus HOO31_10105 PF02867 Ribonucleotide reductase, barrel domain HOO31_10105 PF00317 Ribonucleotide reductase, all-alpha domain HOO31_10105 PF03477 ATP cone domain HOO31_10110 PF00268 Ribonucleotide reductase, small chain HOO31_10115 PF05736 OprF membrane domain HOO31_10115 PF00691 OmpA family HOO31_10125 PF00593 TonB dependent receptor HOO31_10125 PF07715 TonB-dependent Receptor Plug Domain HOO31_10135 PF08447 PAS fold HOO31_10135 PF00989 PAS fold HOO31_10135 PF00512 His Kinase A (phospho-acceptor) domain HOO31_10135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_10140 PF00072 Response regulator receiver domain HOO31_10140 PF08769 Sporulation initiation factor Spo0A C terminal HOO31_10160 PF08240 Alcohol dehydrogenase GroES-like domain HOO31_10160 PF00107 Zinc-binding dehydrogenase HOO31_10165 PF01638 HxlR-like helix-turn-helix HOO31_10170 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HOO31_10170 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HOO31_10175 PF02934 GatB/GatE catalytic domain HOO31_10175 PF02637 GatB domain HOO31_10185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HOO31_10185 PF01872 RibD C-terminal domain HOO31_10190 PF00364 Biotin-requiring enzyme HOO31_10195 PF02785 Biotin carboxylase C-terminal domain HOO31_10195 PF00289 Biotin carboxylase, N-terminal domain HOO31_10195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HOO31_10200 PF00270 DEAD/DEAH box helicase HOO31_10200 PF00271 Helicase conserved C-terminal domain HOO31_10205 PF00313 'Cold-shock' DNA-binding domain HOO31_10220 PF01384 Phosphate transporter family HOO31_10230 PF13537 Glutamine amidotransferase domain HOO31_10230 PF00733 Asparagine synthase HOO31_10240 PF13638 PIN domain HOO31_10240 PF02562 PhoH-like protein HOO31_10245 PF03653 Uncharacterised protein family (UPF0093) HOO31_10250 PF12002 MgsA AAA+ ATPase C terminal HOO31_10250 PF05496 Holliday junction DNA helicase RuvB P-loop domain HOO31_10250 PF01661 Macro domain HOO31_10250 PF16193 AAA C-terminal domain HOO31_10255 PF01479 S4 domain HOO31_10255 PF00849 RNA pseudouridylate synthase HOO31_10260 PF00571 CBS domain HOO31_10260 PF01380 SIS domain HOO31_10265 PF00753 Metallo-beta-lactamase superfamily HOO31_10265 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HOO31_10265 PF17770 Ribonuclease J C-terminal domain HOO31_10270 PF00398 Ribosomal RNA adenine dimethylase HOO31_10275 PF00977 Histidine biosynthesis protein HOO31_10290 PF04055 Radical SAM superfamily HOO31_10295 PF00749 tRNA synthetases class I (E and Q), catalytic domain HOO31_10300 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HOO31_10305 PF00486 Transcriptional regulatory protein, C terminal HOO31_10305 PF00072 Response regulator receiver domain HOO31_10310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HOO31_10330 PF00873 AcrB/AcrD/AcrF family HOO31_10335 PF04264 YceI-like domain HOO31_10340 PF00291 Pyridoxal-phosphate dependent enzyme HOO31_10355 PF00149 Calcineurin-like phosphoesterase HOO31_10360 PF00011 Hsp20/alpha crystallin family HOO31_10370 PF12857 TOBE-like domain HOO31_10370 PF17850 CysA C-terminal regulatory domain HOO31_10370 PF00005 ABC transporter HOO31_10375 PF00528 Binding-protein-dependent transport system inner membrane component HOO31_10380 PF00528 Binding-protein-dependent transport system inner membrane component HOO31_10385 PF00672 HAMP domain HOO31_10385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HOO31_10385 PF02203 Tar ligand binding domain homologue HOO31_10390 PF00563 EAL domain HOO31_10390 PF00990 Diguanylate cyclase, GGDEF domain HOO31_10390 PF10442 FIST C domain HOO31_10390 PF08495 FIST N domain HOO31_10395 PF00581 Rhodanese-like domain HOO31_10395 PF00899 ThiF family HOO31_10410 PF02082 Transcriptional regulator HOO31_10415 PF00679 Elongation factor G C-terminus HOO31_10415 PF00009 Elongation factor Tu GTP binding domain HOO31_10415 PF03144 Elongation factor Tu domain 2 HOO31_10420 PF04143 Sulphur transport HOO31_10425 PF01206 Sulfurtransferase TusA HOO31_10430 PF00884 Sulfatase HOO31_10430 PF08019 Phosphoethanolamine transferase EptA/EptB HOO31_10440 PF01219 Prokaryotic diacylglycerol kinase HOO31_10470 PF00486 Transcriptional regulatory protein, C terminal HOO31_10470 PF00072 Response regulator receiver domain HOO31_10480 PF02511 Thymidylate synthase complementing protein HOO31_10485 PF03458 UPF0126 domain HOO31_10495 PF00551 Formyl transferase HOO31_10495 PF02911 Formyl transferase, C-terminal domain HOO31_10500 PF02075 Crossover junction endodeoxyribonuclease RuvC