locus-tag class description ASKIR_0001 PF00308 Bacterial dnaA protein ASKIR_0001 PF08299 Bacterial dnaA protein helix-turn-helix ASKIR_0001 PF11638 DnaA N-terminal domain ASKIR_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain ASKIR_0002 PF02767 DNA polymerase III beta subunit, central domain ASKIR_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain ASKIR_0003 PF01751 Toprim domain ASKIR_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_0003 PF00204 DNA gyrase B ASKIR_0003 PF00986 DNA gyrase B subunit, carboxyl terminus ASKIR_0004 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASKIR_0005 PF14489 QueF-like protein ASKIR_0009 PF13649 Methyltransferase domain ASKIR_0010 PF00005 ABC transporter ASKIR_0010 PF08402 TOBE domain ASKIR_0011 PF00528 Binding-protein-dependent transport system inner membrane component ASKIR_0014 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASKIR_0014 PF03459 TOBE domain ASKIR_0016 PF03466 LysR substrate binding domain ASKIR_0016 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASKIR_0018 PF00849 RNA pseudouridylate synthase ASKIR_0019 PF10397 Adenylosuccinate lyase C-terminus ASKIR_0019 PF00206 Lyase ASKIR_0020 PF03477 ATP cone domain ASKIR_0020 PF02867 Ribonucleotide reductase, barrel domain ASKIR_0020 PF00317 Ribonucleotide reductase, all-alpha domain ASKIR_0021 PF00268 Ribonucleotide reductase, small chain ASKIR_0023 PF00318 Ribosomal protein S2 ASKIR_0024 PF00107 Zinc-binding dehydrogenase ASKIR_0024 PF08240 Alcohol dehydrogenase GroES-like domain ASKIR_0025 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ASKIR_0025 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ASKIR_0026 PF02934 GatB/GatE catalytic domain ASKIR_0026 PF02637 GatB domain ASKIR_0028 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ASKIR_0028 PF01872 RibD C-terminal domain ASKIR_0029 PF00364 Biotin-requiring enzyme ASKIR_0030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASKIR_0030 PF02785 Biotin carboxylase C-terminal domain ASKIR_0030 PF00289 Biotin carboxylase, N-terminal domain ASKIR_0031 PF00270 DEAD/DEAH box helicase ASKIR_0031 PF00271 Helicase conserved C-terminal domain ASKIR_0032 PF01384 Phosphate transporter family ASKIR_0034 PF00733 Asparagine synthase ASKIR_0034 PF13537 Glutamine amidotransferase domain ASKIR_0036 PF13638 PIN domain ASKIR_0036 PF02562 PhoH-like protein ASKIR_0037 PF03653 Uncharacterised protein family (UPF0093) ASKIR_0038 PF16193 AAA C-terminal domain ASKIR_0038 PF01661 Macro domain ASKIR_0038 PF12002 MgsA AAA+ ATPase C terminal ASKIR_0038 PF05496 Holliday junction DNA helicase RuvB P-loop domain ASKIR_0039 PF01479 S4 domain ASKIR_0039 PF00849 RNA pseudouridylate synthase ASKIR_0040 PF00571 CBS domain ASKIR_0040 PF01380 SIS domain ASKIR_0041 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ASKIR_0041 PF00753 Metallo-beta-lactamase superfamily ASKIR_0041 PF17770 Ribonuclease J C-terminal domain ASKIR_0042 PF00398 Ribosomal RNA adenine dimethylase ASKIR_0043 PF00977 Histidine biosynthesis protein ASKIR_0046 PF04055 Radical SAM superfamily ASKIR_0047 PF00749 tRNA synthetases class I (E and Q), catalytic domain ASKIR_0048 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ASKIR_0049 PF00072 Response regulator receiver domain ASKIR_0049 PF00486 Transcriptional regulatory protein, C terminal ASKIR_0050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_0054 PF00873 AcrB/AcrD/AcrF family ASKIR_0055 PF04264 YceI-like domain ASKIR_0056 PF03447 Homoserine dehydrogenase, NAD binding domain ASKIR_0056 PF00742 Homoserine dehydrogenase ASKIR_0056 PF01842 ACT domain ASKIR_0057 PF00155 Aminotransferase class I and II ASKIR_0059 PF00588 SpoU rRNA Methylase family ASKIR_0059 PF08032 RNA 2'-O ribose methyltransferase substrate binding ASKIR_0060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASKIR_0061 PF01197 Ribosomal protein L31 ASKIR_0064 PF01040 UbiA prenyltransferase family ASKIR_0066 PF12849 PBP superfamily domain ASKIR_0067 PF12792 CSS motif domain associated with EAL ASKIR_0067 PF00563 EAL domain ASKIR_0068 PF00528 Binding-protein-dependent transport system inner membrane component ASKIR_0069 PF00528 Binding-protein-dependent transport system inner membrane component ASKIR_0070 PF00005 ABC transporter ASKIR_0073 PF00486 Transcriptional regulatory protein, C terminal ASKIR_0073 PF00072 Response regulator receiver domain ASKIR_0074 PF16736 Single Cache-like ASKIR_0074 PF00989 PAS fold ASKIR_0074 PF00512 His Kinase A (phospho-acceptor) domain ASKIR_0074 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_0075 PF00572 Ribosomal protein L13 ASKIR_0076 PF00380 Ribosomal protein S9/S16 ASKIR_0079 PF03070 TENA/THI-4/PQQC family ASKIR_0080 PF02581 Thiamine monophosphate synthase ASKIR_0081 PF06968 Biotin and Thiamin Synthesis associated domain ASKIR_0081 PF04055 Radical SAM superfamily ASKIR_0082 PF05690 Thiazole biosynthesis protein ThiG ASKIR_0083 PF00899 ThiF family ASKIR_0083 PF00581 Rhodanese-like domain ASKIR_0085 PF01964 Radical SAM ThiC family ASKIR_0086 PF17284 Spermidine synthase tetramerisation domain ASKIR_0087 PF02110 Hydroxyethylthiazole kinase family ASKIR_0088 PF08543 Phosphomethylpyrimidine kinase ASKIR_0088 PF02581 Thiamine monophosphate synthase ASKIR_0089 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASKIR_0090 PF13419 Haloacid dehalogenase-like hydrolase ASKIR_0094 PF09383 NIL domain ASKIR_0094 PF00005 ABC transporter ASKIR_0095 PF02405 Permease MlaE ASKIR_0096 PF02664 S-Ribosylhomocysteinase (LuxS) ASKIR_0097 PF01266 FAD dependent oxidoreductase ASKIR_0097 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ASKIR_0100 PF02607 B12 binding domain ASKIR_0100 PF02965 Vitamin B12 dependent methionine synthase, activation domain ASKIR_0100 PF00809 Pterin binding enzyme ASKIR_0100 PF02574 Homocysteine S-methyltransferase ASKIR_0100 PF02310 B12 binding domain ASKIR_0102 PF01063 Amino-transferase class IV ASKIR_0105 PF01502 Phosphoribosyl-AMP cyclohydrolase ASKIR_0105 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ASKIR_0108 PF00583 Acetyltransferase (GNAT) family ASKIR_0109 PF00202 Aminotransferase class-III ASKIR_0110 PF06339 Ectoine synthase ASKIR_0111 PF05721 Phytanoyl-CoA dioxygenase (PhyH) ASKIR_0113 PF01883 Iron-sulfur cluster assembly protein ASKIR_0113 PF10609 NUBPL iron-transfer P-loop NTPase ASKIR_0115 PF02542 YgbB family ASKIR_0115 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ASKIR_0117 PF04608 Phosphatidylglycerophosphatase A ASKIR_0119 PF00117 Glutamine amidotransferase class-I ASKIR_0119 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ASKIR_0121 PF00709 Adenylosuccinate synthetase ASKIR_0122 PF13393 Histidyl-tRNA synthetase ASKIR_0123 PF00266 Aminotransferase class-V ASKIR_0125 PF04264 YceI-like domain ASKIR_0127 PF17954 Quercetinase C-terminal cupin domain ASKIR_0127 PF02678 Pirin ASKIR_0128 PF09962 Uncharacterized conserved protein (DUF2196) ASKIR_0129 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ASKIR_0129 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ASKIR_0130 PF00586 AIR synthase related protein, N-terminal domain ASKIR_0130 PF02769 AIR synthase related protein, C-terminal domain ASKIR_0131 PF01121 Dephospho-CoA kinase ASKIR_0132 PF13746 4Fe-4S dicluster domain ASKIR_0132 PF12801 4Fe-4S binding domain ASKIR_0132 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ASKIR_0133 PF00117 Glutamine amidotransferase class-I ASKIR_0133 PF06418 CTP synthase N-terminus ASKIR_0134 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ASKIR_0134 PF17768 RecJ OB domain ASKIR_0134 PF02272 DHHA1 domain ASKIR_0134 PF01368 DHH family ASKIR_0137 PF01965 DJ-1/PfpI family ASKIR_0138 PF07733 Bacterial DNA polymerase III alpha NTPase domain ASKIR_0138 PF14579 Helix-hairpin-helix motif ASKIR_0138 PF02811 PHP domain ASKIR_0138 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ASKIR_0139 PF01975 Survival protein SurE ASKIR_0142 PF08212 Lipocalin-like domain ASKIR_0146 PF03109 ABC1 family ASKIR_0148 PF00563 EAL domain ASKIR_0148 PF12792 CSS motif domain associated with EAL ASKIR_0149 PF00072 Response regulator receiver domain ASKIR_0149 PF04397 LytTr DNA-binding domain ASKIR_0150 PF06580 Histidine kinase ASKIR_0150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_0150 PF13492 GAF domain ASKIR_0150 PF07694 5TMR of 5TMR-LYT ASKIR_0151 PF01593 Flavin containing amine oxidoreductase ASKIR_0152 PF03441 FAD binding domain of DNA photolyase ASKIR_0152 PF00875 DNA photolyase ASKIR_0155 PF01967 MoaC family ASKIR_0156 PF01165 Ribosomal protein S21 ASKIR_0157 PF03462 PCRF domain ASKIR_0157 PF00472 RF-1 domain ASKIR_0158 PF01649 Ribosomal protein S20 ASKIR_0159 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ASKIR_0159 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ASKIR_0159 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ASKIR_0159 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ASKIR_0160 PF01252 Signal peptidase (SPase) II ASKIR_0161 PF00330 Aconitase family (aconitate hydratase) ASKIR_0162 PF12804 MobA-like NTP transferase domain ASKIR_0165 PF00453 Ribosomal protein L20 ASKIR_0166 PF01632 Ribosomal protein L35 ASKIR_0167 PF05198 Translation initiation factor IF-3, N-terminal domain ASKIR_0167 PF00707 Translation initiation factor IF-3, C-terminal domain ASKIR_0168 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ASKIR_0168 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASKIR_0168 PF03129 Anticodon binding domain ASKIR_0173 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ASKIR_0173 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ASKIR_0173 PF13288 DXP reductoisomerase C-terminal domain ASKIR_0176 PF00814 Glycoprotease family ASKIR_0178 PF03853 YjeF-related protein N-terminus ASKIR_0178 PF01256 Carbohydrate kinase ASKIR_0187 PF02436 Conserved carboxylase domain ASKIR_0187 PF00682 HMGL-like ASKIR_0187 PF00364 Biotin-requiring enzyme ASKIR_0190 PF00672 HAMP domain ASKIR_0190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_0190 PF02203 Tar ligand binding domain homologue ASKIR_0191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_0191 PF08447 PAS fold ASKIR_0191 PF08448 PAS fold ASKIR_0192 PF02780 Transketolase, C-terminal domain ASKIR_0192 PF02779 Transketolase, pyrimidine binding domain ASKIR_0192 PF00456 Transketolase, thiamine diphosphate binding domain ASKIR_0193 PF01451 Low molecular weight phosphotyrosine protein phosphatase ASKIR_0195 PF02040 Arsenical pump membrane protein ASKIR_0202 PF00909 Ammonium Transporter Family ASKIR_0203 PF00543 Nitrogen regulatory protein P-II ASKIR_0205 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ASKIR_0205 PF02154 Flagellar motor switch protein FliM ASKIR_0206 PF02119 Flagellar P-ring protein ASKIR_0208 PF01313 Bacterial export proteins, family 3 ASKIR_0213 PF02107 Flagellar L-ring protein ASKIR_0216 PF02561 Flagellar protein FliS ASKIR_0218 PF01171 PP-loop family ASKIR_0219 PF04055 Radical SAM superfamily ASKIR_0219 PF00919 Uncharacterized protein family UPF0004 ASKIR_0219 PF18693 TRAM domain ASKIR_0221 PF02569 Pantoate-beta-alanine ligase ASKIR_0222 PF00528 Binding-protein-dependent transport system inner membrane component ASKIR_0223 PF01648 4'-phosphopantetheinyl transferase superfamily ASKIR_0226 PF03616 Sodium/glutamate symporter ASKIR_0227 PF03652 Holliday junction resolvase ASKIR_0230 PF00923 Transaldolase/Fructose-6-phosphate aldolase ASKIR_0231 PF01474 Class-II DAHP synthetase family ASKIR_0232 PF03502 Nucleoside-specific channel-forming protein, Tsx ASKIR_0233 PF03960 ArsC family ASKIR_0234 PF02686 Glu-tRNAGln amidotransferase C subunit ASKIR_0235 PF01702 Queuine tRNA-ribosyltransferase ASKIR_0237 PF01225 Mur ligase family, catalytic domain ASKIR_0237 PF08245 Mur ligase middle domain ASKIR_0237 PF02875 Mur ligase family, glutamate ligase domain ASKIR_0238 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASKIR_0238 PF03466 LysR substrate binding domain ASKIR_0239 PF00580 UvrD/REP helicase N-terminal domain ASKIR_0239 PF13361 UvrD-like helicase C-terminal domain ASKIR_0240 PF01509 TruB family pseudouridylate synthase (N terminal domain) ASKIR_0241 PF00288 GHMP kinases N terminal domain ASKIR_0242 PF01668 SmpB protein ASKIR_0243 PF00115 Cytochrome C and Quinol oxidase polypeptide I ASKIR_0246 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ASKIR_0246 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ASKIR_0254 PF00472 RF-1 domain ASKIR_0254 PF03462 PCRF domain ASKIR_0257 PF02660 Glycerol-3-phosphate acyltransferase ASKIR_0258 PF02445 Quinolinate synthetase A protein ASKIR_0259 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ASKIR_0259 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ASKIR_0260 PF02272 DHHA1 domain ASKIR_0260 PF01368 DHH family ASKIR_0262 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ASKIR_0264 PF00288 GHMP kinases N terminal domain ASKIR_0264 PF08544 GHMP kinases C terminal ASKIR_0266 PF00009 Elongation factor Tu GTP binding domain ASKIR_0266 PF11987 Translation-initiation factor 2 ASKIR_0266 PF04760 Translation initiation factor IF-2, N-terminal region ASKIR_0267 PF02033 Ribosome-binding factor A ASKIR_0268 PF02576 RimP N-terminal domain ASKIR_0269 PF01872 RibD C-terminal domain ASKIR_0269 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ASKIR_0270 PF01132 Elongation factor P (EF-P) OB domain ASKIR_0270 PF08207 Elongation factor P (EF-P) KOW-like domain ASKIR_0270 PF09285 Elongation factor P, C-terminal ASKIR_0271 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASKIR_0271 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASKIR_0271 PF01842 ACT domain ASKIR_0272 PF00575 S1 RNA binding domain ASKIR_0273 PF02401 LytB protein ASKIR_0274 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ASKIR_0275 PF03147 Ferredoxin-fold anticodon binding domain ASKIR_0275 PF01588 Putative tRNA binding domain ASKIR_0275 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ASKIR_0275 PF03484 tRNA synthetase B5 domain ASKIR_0276 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ASKIR_0276 PF01409 tRNA synthetases class II core domain (F) ASKIR_0277 PF01230 HIT domain ASKIR_0279 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ASKIR_0280 PF00109 Beta-ketoacyl synthase, N-terminal domain ASKIR_0280 PF02801 Beta-ketoacyl synthase, C-terminal domain ASKIR_0281 PF00550 Phosphopantetheine attachment site ASKIR_0285 PF06508 Queuosine biosynthesis protein QueC ASKIR_0287 PF04452 RNA methyltransferase ASKIR_0290 PF00033 Cytochrome b/b6/petB ASKIR_0290 PF00032 Cytochrome b(C-terminal)/b6/petD ASKIR_0291 PF00355 Rieske [2Fe-2S] domain ASKIR_0292 PF00291 Pyridoxal-phosphate dependent enzyme ASKIR_0293 PF00696 Amino acid kinase family ASKIR_0294 PF00580 UvrD/REP helicase N-terminal domain ASKIR_0294 PF13361 UvrD-like helicase C-terminal domain ASKIR_0295 PF00119 ATP synthase A chain ASKIR_0296 PF13291 ACT domain ASKIR_0296 PF00291 Pyridoxal-phosphate dependent enzyme ASKIR_0297 PF08267 Cobalamin-independent synthase, N-terminal domain ASKIR_0297 PF01717 Cobalamin-independent synthase, Catalytic domain ASKIR_0299 PF01746 tRNA (Guanine-1)-methyltransferase ASKIR_0300 PF01245 Ribosomal protein L19 ASKIR_0301 PF09335 SNARE associated Golgi protein ASKIR_0302 PF00155 Aminotransferase class I and II ASKIR_0303 PF12833 Helix-turn-helix domain ASKIR_0305 PF01042 Endoribonuclease L-PSP ASKIR_0308 PF00575 S1 RNA binding domain ASKIR_0308 PF16921 Tex protein YqgF-like domain ASKIR_0308 PF09371 Tex-like protein N-terminal domain ASKIR_0308 PF17674 HHH domain ASKIR_0311 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ASKIR_0311 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ASKIR_0313 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ASKIR_0313 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ASKIR_0314 PF00425 chorismate binding enzyme ASKIR_0315 PF01063 Amino-transferase class IV ASKIR_0316 PF03831 PhnA domain ASKIR_0316 PF08274 PhnA Zinc-Ribbon ASKIR_0318 PF00202 Aminotransferase class-III ASKIR_0319 PF00672 HAMP domain ASKIR_0319 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_0319 PF00512 His Kinase A (phospho-acceptor) domain ASKIR_0320 PF00486 Transcriptional regulatory protein, C terminal ASKIR_0320 PF00072 Response regulator receiver domain ASKIR_0321 PF01594 AI-2E family transporter ASKIR_0323 PF00579 tRNA synthetases class I (W and Y) ASKIR_0324 PF01740 STAS domain ASKIR_0324 PF00916 Sulfate permease family ASKIR_0328 PF13649 Methyltransferase domain ASKIR_0329 PF00593 TonB dependent receptor ASKIR_0329 PF07715 TonB-dependent Receptor Plug Domain ASKIR_0331 PF02659 Putative manganese efflux pump ASKIR_0332 PF07690 Major Facilitator Superfamily ASKIR_0334 PF00664 ABC transporter transmembrane region ASKIR_0334 PF00005 ABC transporter ASKIR_0335 PF00664 ABC transporter transmembrane region ASKIR_0335 PF00005 ABC transporter ASKIR_0335 PF08021 Siderophore-interacting FAD-binding domain ASKIR_0335 PF04954 Siderophore-interacting protein ASKIR_0336 PF07715 TonB-dependent Receptor Plug Domain ASKIR_0336 PF00593 TonB dependent receptor ASKIR_0339 PF01545 Cation efflux family ASKIR_0340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASKIR_0340 PF02403 Seryl-tRNA synthetase N-terminal domain ASKIR_0344 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ASKIR_0345 PF00037 4Fe-4S binding domain ASKIR_0345 PF12801 4Fe-4S binding domain ASKIR_0346 PF12800 4Fe-4S binding domain ASKIR_0346 PF12838 4Fe-4S dicluster domain ASKIR_0347 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ASKIR_0347 PF10518 TAT (twin-arginine translocation) pathway signal sequence ASKIR_0347 PF01568 Molydopterin dinucleotide binding domain ASKIR_0347 PF00384 Molybdopterin oxidoreductase ASKIR_0350 PF04055 Radical SAM superfamily ASKIR_0350 PF06463 Molybdenum Cofactor Synthesis C ASKIR_0351 PF00312 Ribosomal protein S15 ASKIR_0355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_0355 PF00512 His Kinase A (phospho-acceptor) domain ASKIR_0356 PF00072 Response regulator receiver domain ASKIR_0356 PF00486 Transcriptional regulatory protein, C terminal ASKIR_0358 PF01116 Fructose-bisphosphate aldolase class-II ASKIR_0359 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ASKIR_0359 PF00056 lactate/malate dehydrogenase, NAD binding domain ASKIR_0362 PF02472 Biopolymer transport protein ExbD/TolR ASKIR_0363 PF01618 MotA/TolQ/ExbB proton channel family ASKIR_0365 PF01202 Shikimate kinase ASKIR_0366 PF00815 Histidinol dehydrogenase ASKIR_0368 PF00348 Polyprenyl synthetase ASKIR_0369 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ASKIR_0369 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ASKIR_0369 PF01488 Shikimate / quinate 5-dehydrogenase ASKIR_0370 PF04073 Aminoacyl-tRNA editing domain ASKIR_0370 PF03129 Anticodon binding domain ASKIR_0370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASKIR_0371 PF05552 Conserved TM helix ASKIR_0371 PF00924 Mechanosensitive ion channel ASKIR_0372 PF01966 HD domain ASKIR_0372 PF01743 Poly A polymerase head domain ASKIR_0372 PF12627 Probable RNA and SrmB- binding site of polymerase A ASKIR_0376 PF02699 Preprotein translocase subunit ASKIR_0377 PF02355 Protein export membrane protein ASKIR_0378 PF07549 SecD/SecF GG Motif ASKIR_0378 PF02355 Protein export membrane protein ASKIR_0381 PF13677 Membrane MotB of proton-channel complex MotA/MotB ASKIR_0381 PF00691 OmpA family ASKIR_0382 PF01618 MotA/TolQ/ExbB proton channel family ASKIR_0384 PF09334 tRNA synthetases class I (M) ASKIR_0384 PF00133 tRNA synthetases class I (I, L, M and V) ASKIR_0384 PF13603 Leucyl-tRNA synthetase, Domain 2 ASKIR_0386 PF08245 Mur ligase middle domain ASKIR_0392 PF17757 UvrB interaction domain ASKIR_0392 PF03461 TRCF domain ASKIR_0392 PF00271 Helicase conserved C-terminal domain ASKIR_0392 PF00270 DEAD/DEAH box helicase ASKIR_0392 PF02559 CarD-like/TRCF domain ASKIR_0397 PF00800 Prephenate dehydratase ASKIR_0397 PF01817 Chorismate mutase type II ASKIR_0397 PF01842 ACT domain ASKIR_0404 PF07669 Eco57I restriction-modification methylase ASKIR_0407 PF00072 Response regulator receiver domain ASKIR_0407 PF00486 Transcriptional regulatory protein, C terminal ASKIR_0410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_0410 PF00672 HAMP domain ASKIR_0410 PF02743 Cache domain ASKIR_0411 PF00486 Transcriptional regulatory protein, C terminal ASKIR_0411 PF00072 Response regulator receiver domain ASKIR_0413 PF00512 His Kinase A (phospho-acceptor) domain ASKIR_0413 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_0413 PF18719 ArlS sensor domain ASKIR_0414 PF13277 YmdB-like protein ASKIR_0417 PF01209 ubiE/COQ5 methyltransferase family ASKIR_0418 PF13742 OB-fold nucleic acid binding domain ASKIR_0418 PF02601 Exonuclease VII, large subunit ASKIR_0419 PF01584 CheW-like domain ASKIR_0420 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ASKIR_0421 PF02261 Aspartate decarboxylase ASKIR_0422 PF02575 YbaB/EbfC DNA-binding family ASKIR_0423 PF00348 Polyprenyl synthetase ASKIR_0424 PF00166 Chaperonin 10 Kd subunit ASKIR_0425 PF00118 TCP-1/cpn60 chaperonin family ASKIR_0427 PF00072 Response regulator receiver domain ASKIR_0427 PF00486 Transcriptional regulatory protein, C terminal ASKIR_0428 PF18719 ArlS sensor domain ASKIR_0428 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_0428 PF00512 His Kinase A (phospho-acceptor) domain ASKIR_0429 PF00459 Inositol monophosphatase family ASKIR_0430 PF01380 SIS domain ASKIR_0432 PF02773 S-adenosylmethionine synthetase, C-terminal domain ASKIR_0432 PF02772 S-adenosylmethionine synthetase, central domain ASKIR_0432 PF00438 S-adenosylmethionine synthetase, N-terminal domain ASKIR_0433 PF01039 Carboxyl transferase domain ASKIR_0433 PF17848 Acetyl-coA carboxylase zinc finger domain ASKIR_0434 PF02581 Thiamine monophosphate synthase ASKIR_0435 PF02590 Predicted SPOUT methyltransferase ASKIR_0437 PF01207 Dihydrouridine synthase (Dus) ASKIR_0439 PF00004 ATPase family associated with various cellular activities (AAA) ASKIR_0439 PF17862 AAA+ lid domain ASKIR_0439 PF01434 Peptidase family M41 ASKIR_0440 PF08502 LeuA allosteric (dimerisation) domain ASKIR_0440 PF00682 HMGL-like ASKIR_0443 PF01624 MutS domain I ASKIR_0443 PF05188 MutS domain II ASKIR_0443 PF05192 MutS domain III ASKIR_0443 PF05190 MutS family domain IV ASKIR_0443 PF00488 MutS domain V ASKIR_0445 PF01914 MarC family integral membrane protein ASKIR_0447 PF00990 Diguanylate cyclase, GGDEF domain ASKIR_0447 PF00072 Response regulator receiver domain ASKIR_0449 PF10414 Sirohaem synthase dimerisation region ASKIR_0449 PF14824 Sirohaem biosynthesis protein central ASKIR_0449 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASKIR_0451 PF10414 Sirohaem synthase dimerisation region ASKIR_0451 PF14824 Sirohaem biosynthesis protein central ASKIR_0451 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASKIR_0452 PF01871 AMMECR1 ASKIR_0453 PF01875 Memo-like protein ASKIR_0454 PF00672 HAMP domain ASKIR_0454 PF02203 Tar ligand binding domain homologue ASKIR_0454 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_0455 PF02698 DUF218 domain ASKIR_0456 PF00005 ABC transporter ASKIR_0457 PF00950 ABC 3 transport family ASKIR_0458 PF17783 CvfB-like winged helix domain ASKIR_0458 PF13509 S1 domain ASKIR_0459 PF08534 Redoxin ASKIR_0461 PF13361 UvrD-like helicase C-terminal domain ASKIR_0461 PF00580 UvrD/REP helicase N-terminal domain ASKIR_0462 PF00999 Sodium/hydrogen exchanger family ASKIR_0462 PF02080 TrkA-C domain ASKIR_0462 PF02254 TrkA-N domain ASKIR_0463 PF00174 Oxidoreductase molybdopterin binding domain ASKIR_0475 PF00912 Transglycosylase ASKIR_0475 PF00905 Penicillin binding protein transpeptidase domain ASKIR_0476 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASKIR_0476 PF00005 ABC transporter ASKIR_0477 PF01676 Metalloenzyme superfamily ASKIR_0477 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ASKIR_0478 PF00953 Glycosyl transferase family 4 ASKIR_0478 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ASKIR_0479 PF08245 Mur ligase middle domain ASKIR_0484 PF00009 Elongation factor Tu GTP binding domain ASKIR_0484 PF03144 Elongation factor Tu domain 2 ASKIR_0484 PF03143 Elongation factor Tu C-terminal domain ASKIR_0485 PF00471 Ribosomal protein L33 ASKIR_0488 PF02357 Transcription termination factor nusG ASKIR_0489 PF00298 Ribosomal protein L11, RNA binding domain ASKIR_0489 PF03946 Ribosomal protein L11, N-terminal domain ASKIR_0490 PF00687 Ribosomal protein L1p/L10e family ASKIR_0491 PF00466 Ribosomal protein L10 ASKIR_0492 PF00542 Ribosomal protein L7/L12 C-terminal domain ASKIR_0492 PF16320 Ribosomal protein L7/L12 dimerisation domain ASKIR_0493 PF04565 RNA polymerase Rpb2, domain 3 ASKIR_0493 PF04563 RNA polymerase beta subunit ASKIR_0493 PF04561 RNA polymerase Rpb2, domain 2 ASKIR_0493 PF10385 RNA polymerase beta subunit external 1 domain ASKIR_0493 PF00562 RNA polymerase Rpb2, domain 6 ASKIR_0493 PF04560 RNA polymerase Rpb2, domain 7 ASKIR_0494 PF04997 RNA polymerase Rpb1, domain 1 ASKIR_0494 PF00623 RNA polymerase Rpb1, domain 2 ASKIR_0494 PF05000 RNA polymerase Rpb1, domain 4 ASKIR_0494 PF04983 RNA polymerase Rpb1, domain 3 ASKIR_0494 PF04998 RNA polymerase Rpb1, domain 5 ASKIR_0497 PF00990 Diguanylate cyclase, GGDEF domain ASKIR_0498 PF01551 Peptidase family M23 ASKIR_0498 PF10145 Phage-related minor tail protein ASKIR_0498 PF01464 Transglycosylase SLT domain ASKIR_0500 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ASKIR_0500 PF02769 AIR synthase related protein, C-terminal domain ASKIR_0500 PF00586 AIR synthase related protein, N-terminal domain ASKIR_0501 PF01808 AICARFT/IMPCHase bienzyme ASKIR_0501 PF02142 MGS-like domain ASKIR_0502 PF08447 PAS fold ASKIR_0502 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_0502 PF08448 PAS fold ASKIR_0503 PF00202 Aminotransferase class-III ASKIR_0506 PF01641 SelR domain ASKIR_0508 PF01625 Peptide methionine sulfoxide reductase ASKIR_0511 PF03976 Polyphosphate kinase 2 (PPK2) ASKIR_0512 PF01264 Chorismate synthase ASKIR_0513 PF00035 Double-stranded RNA binding motif ASKIR_0513 PF14622 Ribonuclease-III-like ASKIR_0515 PF16730 DnaG-primase C-terminal, helicase-binding domain ASKIR_0515 PF13662 Toprim domain ASKIR_0515 PF08275 DNA primase catalytic core, N-terminal domain ASKIR_0515 PF01807 CHC2 zinc finger ASKIR_0516 PF00829 Ribosomal prokaryotic L21 protein ASKIR_0517 PF01016 Ribosomal L27 protein ASKIR_0518 PF01926 50S ribosome-binding GTPase ASKIR_0518 PF01018 GTP1/OBG ASKIR_0519 PF00696 Amino acid kinase family ASKIR_0520 PF02911 Formyl transferase, C-terminal domain ASKIR_0520 PF00551 Formyl transferase ASKIR_0522 PF02237 Biotin protein ligase C terminal domain ASKIR_0522 PF03099 Biotin/lipoate A/B protein ligase family ASKIR_0522 PF08279 HTH domain ASKIR_0523 PF13614 AAA domain ASKIR_0524 PF02195 ParB-like nuclease domain ASKIR_0524 PF17762 HTH domain found in ParB protein ASKIR_0526 PF00430 ATP synthase B/B' CF(0) ASKIR_0527 PF00213 ATP synthase delta (OSCP) subunit ASKIR_0528 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASKIR_0528 PF00306 ATP synthase alpha/beta chain, C terminal domain ASKIR_0528 PF02874 ATP synthase alpha/beta family, beta-barrel domain ASKIR_0529 PF00231 ATP synthase ASKIR_0530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASKIR_0530 PF02874 ATP synthase alpha/beta family, beta-barrel domain ASKIR_0531 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ASKIR_0532 PF01618 MotA/TolQ/ExbB proton channel family ASKIR_0533 PF02472 Biopolymer transport protein ExbD/TolR ASKIR_0535 PF04052 TolB amino-terminal domain ASKIR_0536 PF00691 OmpA family ASKIR_0536 PF05736 OprF membrane domain ASKIR_0538 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ASKIR_0539 PF00698 Acyl transferase domain ASKIR_0540 PF01048 Phosphorylase superfamily ASKIR_0541 PF10415 Fumarase C C-terminus ASKIR_0541 PF00206 Lyase ASKIR_0545 PF02810 SEC-C motif ASKIR_0546 PF01368 DHH family ASKIR_0546 PF02833 DHHA2 domain ASKIR_0547 PF00924 Mechanosensitive ion channel ASKIR_0548 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ASKIR_0548 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ASKIR_0549 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ASKIR_0549 PF12833 Helix-turn-helix domain ASKIR_0550 PF00682 HMGL-like ASKIR_0550 PF08502 LeuA allosteric (dimerisation) domain ASKIR_0551 PF00491 Arginase family ASKIR_0553 PF05958 tRNA (Uracil-5-)-methyltransferase ASKIR_0554 PF00313 'Cold-shock' DNA-binding domain ASKIR_0555 PF00005 ABC transporter ASKIR_0556 PF00528 Binding-protein-dependent transport system inner membrane component ASKIR_0557 PF00528 Binding-protein-dependent transport system inner membrane component ASKIR_0558 PF12849 PBP superfamily domain ASKIR_0559 PF08713 DNA alkylation repair enzyme ASKIR_0560 PF04073 Aminoacyl-tRNA editing domain ASKIR_0564 PF00199 Catalase ASKIR_0564 PF06628 Catalase-related immune-responsive ASKIR_0565 PF12796 Ankyrin repeats (3 copies) ASKIR_0565 PF00023 Ankyrin repeat ASKIR_0569 PF12833 Helix-turn-helix domain ASKIR_0569 PF00072 Response regulator receiver domain ASKIR_0570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_0570 PF00512 His Kinase A (phospho-acceptor) domain ASKIR_0571 PF13746 4Fe-4S dicluster domain ASKIR_0571 PF12801 4Fe-4S binding domain ASKIR_0571 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ASKIR_0572 PF00171 Aldehyde dehydrogenase family ASKIR_0574 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_0574 PF08447 PAS fold ASKIR_0575 PF02203 Tar ligand binding domain homologue ASKIR_0575 PF00672 HAMP domain ASKIR_0575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_0576 PF01168 Alanine racemase, N-terminal domain ASKIR_0577 PF17820 PDZ domain ASKIR_0577 PF02163 Peptidase family M50 ASKIR_0578 PF01066 CDP-alcohol phosphatidyltransferase ASKIR_0580 PF00701 Dihydrodipicolinate synthetase family ASKIR_0582 PF01180 Dihydroorotate dehydrogenase ASKIR_0583 PF00005 ABC transporter ASKIR_0583 PF00664 ABC transporter transmembrane region ASKIR_0584 PF03023 Lipid II flippase MurJ ASKIR_0587 PF02130 Uncharacterized protein family UPF0054 ASKIR_0589 PF13411 MerR HTH family regulatory protein ASKIR_0590 PF00226 DnaJ domain ASKIR_0590 PF01556 DnaJ C terminal domain ASKIR_0595 PF00183 Hsp90 protein ASKIR_0597 PF00271 Helicase conserved C-terminal domain ASKIR_0597 PF00270 DEAD/DEAH box helicase ASKIR_0597 PF03880 DbpA RNA binding domain ASKIR_0598 PF00990 Diguanylate cyclase, GGDEF domain ASKIR_0598 PF03707 Bacterial signalling protein N terminal repeat ASKIR_0598 PF00563 EAL domain ASKIR_0599 PF01545 Cation efflux family ASKIR_0599 PF16916 Dimerisation domain of Zinc Transporter ASKIR_0600 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ASKIR_0600 PF01243 Pyridoxamine 5'-phosphate oxidase ASKIR_0603 PF00563 EAL domain ASKIR_0603 PF08495 FIST N domain ASKIR_0603 PF00990 Diguanylate cyclase, GGDEF domain ASKIR_0603 PF10442 FIST C domain ASKIR_0612 PF00873 AcrB/AcrD/AcrF family ASKIR_0613 PF00529 HlyD membrane-fusion protein of T1SS ASKIR_0613 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ASKIR_0615 PF01047 MarR family ASKIR_0616 PF02348 Cytidylyltransferase ASKIR_0617 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ASKIR_0617 PF01367 5'-3' exonuclease, C-terminal SAM fold ASKIR_0617 PF00476 DNA polymerase family A ASKIR_0618 PF01699 Sodium/calcium exchanger protein ASKIR_0620 PF08338 Domain of unknown function (DUF1731) ASKIR_0620 PF01370 NAD dependent epimerase/dehydratase family ASKIR_0621 PF01118 Semialdehyde dehydrogenase, NAD binding domain ASKIR_0622 PF08534 Redoxin ASKIR_0622 PF01625 Peptide methionine sulfoxide reductase ASKIR_0622 PF01641 SelR domain ASKIR_0627 PF01925 Sulfite exporter TauE/SafE ASKIR_0628 PF00132 Bacterial transferase hexapeptide (six repeats) ASKIR_0628 PF06426 Serine acetyltransferase, N-terminal ASKIR_0629 PF17810 Arginine decarboxylase helical bundle domain ASKIR_0629 PF17944 Arginine decarboxylase C-terminal helical extension ASKIR_0629 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ASKIR_0630 PF13393 Histidyl-tRNA synthetase ASKIR_0630 PF03129 Anticodon binding domain ASKIR_0631 PF02223 Thymidylate kinase ASKIR_0632 PF01467 Cytidylyltransferase-like ASKIR_0633 PF02441 Flavoprotein ASKIR_0635 PF03948 Ribosomal protein L9, C-terminal domain ASKIR_0635 PF01281 Ribosomal protein L9, N-terminal domain ASKIR_0636 PF00227 Proteasome subunit ASKIR_0637 PF10431 C-terminal, D2-small domain, of ClpB protein ASKIR_0637 PF07724 AAA domain (Cdc48 subfamily) ASKIR_0639 PF01026 TatD related DNase ASKIR_0640 PF03330 Lytic transglycolase ASKIR_0640 PF05036 Sporulation related domain ASKIR_0641 PF00475 Imidazoleglycerol-phosphate dehydratase ASKIR_0645 PF01926 50S ribosome-binding GTPase ASKIR_0646 PF00583 Acetyltransferase (GNAT) family ASKIR_0647 PF00338 Ribosomal protein S10p/S20e ASKIR_0648 PF00297 Ribosomal protein L3 ASKIR_0649 PF00573 Ribosomal protein L4/L1 family ASKIR_0650 PF00276 Ribosomal protein L23 ASKIR_0651 PF00181 Ribosomal Proteins L2, RNA binding domain ASKIR_0651 PF03947 Ribosomal Proteins L2, C-terminal domain ASKIR_0652 PF00203 Ribosomal protein S19 ASKIR_0653 PF00237 Ribosomal protein L22p/L17e ASKIR_0654 PF00189 Ribosomal protein S3, C-terminal domain ASKIR_0654 PF07650 KH domain ASKIR_0655 PF00252 Ribosomal protein L16p/L10e ASKIR_0656 PF00831 Ribosomal L29 protein ASKIR_0657 PF00366 Ribosomal protein S17 ASKIR_0658 PF00238 Ribosomal protein L14p/L23e ASKIR_0659 PF00467 KOW motif ASKIR_0659 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ASKIR_0660 PF00281 Ribosomal protein L5 ASKIR_0660 PF00673 ribosomal L5P family C-terminus ASKIR_0661 PF00253 Ribosomal protein S14p/S29e ASKIR_0662 PF00410 Ribosomal protein S8 ASKIR_0663 PF00347 Ribosomal protein L6 ASKIR_0664 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ASKIR_0665 PF00333 Ribosomal protein S5, N-terminal domain ASKIR_0665 PF03719 Ribosomal protein S5, C-terminal domain ASKIR_0666 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ASKIR_0667 PF00344 SecY translocase ASKIR_0668 PF00557 Metallopeptidase family M24 ASKIR_0669 PF01176 Translation initiation factor 1A / IF-1 ASKIR_0670 PF03167 Uracil DNA glycosylase superfamily ASKIR_0672 PF00152 tRNA synthetases class II (D, K and N) ASKIR_0672 PF01336 OB-fold nucleic acid binding domain ASKIR_0672 PF02938 GAD domain ASKIR_0673 PF04055 Radical SAM superfamily ASKIR_0673 PF08497 Radical SAM N-terminal ASKIR_0674 PF05191 Adenylate kinase, active site lid ASKIR_0680 PF00155 Aminotransferase class I and II ASKIR_0681 PF00672 HAMP domain ASKIR_0681 PF02203 Tar ligand binding domain homologue ASKIR_0681 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_0682 PF00842 Alanine racemase, C-terminal domain ASKIR_0682 PF01168 Alanine racemase, N-terminal domain ASKIR_0683 PF01541 GIY-YIG catalytic domain ASKIR_0683 PF02151 UvrB/uvrC motif ASKIR_0683 PF08459 UvrC Helix-hairpin-helix N-terminal ASKIR_0684 PF00873 AcrB/AcrD/AcrF family ASKIR_0685 PF00873 AcrB/AcrD/AcrF family ASKIR_0686 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ASKIR_0688 PF11849 Domain of unknown function (DUF3369) ASKIR_0689 PF00813 FliP family ASKIR_0690 PF03717 Penicillin-binding Protein dimerisation domain ASKIR_0690 PF00905 Penicillin binding protein transpeptidase domain ASKIR_0694 PF00005 ABC transporter ASKIR_0695 PF02390 Putative methyltransferase ASKIR_0697 PF00849 RNA pseudouridylate synthase ASKIR_0697 PF01479 S4 domain ASKIR_0698 PF01098 Cell cycle protein ASKIR_0700 PF00202 Aminotransferase class-III ASKIR_0701 PF06865 Pyrimidine/purine nucleoside phosphorylase ASKIR_0705 PF00313 'Cold-shock' DNA-binding domain ASKIR_0707 PF00140 Sigma-70 factor, region 1.2 ASKIR_0707 PF04542 Sigma-70 region 2 ASKIR_0707 PF04539 Sigma-70 region 3 ASKIR_0707 PF04545 Sigma-70, region 4 ASKIR_0708 PF00694 Aconitase C-terminal domain ASKIR_0709 PF00180 Isocitrate/isopropylmalate dehydrogenase ASKIR_0712 PF00444 Ribosomal protein L36 ASKIR_0713 PF00416 Ribosomal protein S13/S18 ASKIR_0714 PF00411 Ribosomal protein S11 ASKIR_0715 PF00163 Ribosomal protein S4/S9 N-terminal domain ASKIR_0715 PF01479 S4 domain ASKIR_0716 PF01000 RNA polymerase Rpb3/RpoA insert domain ASKIR_0716 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ASKIR_0716 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ASKIR_0717 PF01196 Ribosomal protein L17 ASKIR_0718 PF01425 Amidase ASKIR_0719 PF00571 CBS domain ASKIR_0719 PF00478 IMP dehydrogenase / GMP reductase domain ASKIR_0720 PF02646 RmuC family ASKIR_0722 PF00226 DnaJ domain ASKIR_0722 PF01556 DnaJ C terminal domain ASKIR_0722 PF00684 DnaJ central domain ASKIR_0723 PF00684 DnaJ central domain ASKIR_0723 PF01556 DnaJ C terminal domain ASKIR_0723 PF00226 DnaJ domain ASKIR_0724 PF00933 Glycosyl hydrolase family 3 N terminal domain ASKIR_0725 PF00271 Helicase conserved C-terminal domain ASKIR_0725 PF00270 DEAD/DEAH box helicase ASKIR_0726 PF00403 Heavy-metal-associated domain ASKIR_0727 PF00905 Penicillin binding protein transpeptidase domain ASKIR_0728 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASKIR_0728 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASKIR_0729 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ASKIR_0729 PF00364 Biotin-requiring enzyme ASKIR_0729 PF02817 e3 binding domain ASKIR_0730 PF00456 Transketolase, thiamine diphosphate binding domain ASKIR_0730 PF17831 Pyruvate dehydrogenase E1 component middle domain ASKIR_0731 PF10437 Bacterial lipoate protein ligase C-terminus ASKIR_0731 PF03099 Biotin/lipoate A/B protein ligase family ASKIR_0732 PF04055 Radical SAM superfamily ASKIR_0733 PF00682 HMGL-like ASKIR_0734 PF02203 Tar ligand binding domain homologue ASKIR_0734 PF00672 HAMP domain ASKIR_0734 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_0735 PF00533 BRCA1 C Terminus (BRCT) domain ASKIR_0735 PF03120 NAD-dependent DNA ligase OB-fold domain ASKIR_0735 PF12826 Helix-hairpin-helix motif ASKIR_0735 PF01653 NAD-dependent DNA ligase adenylation domain ASKIR_0736 PF18381 YcaO cyclodehydratase C-terminal domain ASKIR_0736 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ASKIR_0737 PF03473 MOSC domain ASKIR_0738 PF00202 Aminotransferase class-III ASKIR_0740 PF03594 Benzoate membrane transport protein ASKIR_0741 PF02805 Metal binding domain of Ada ASKIR_0741 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ASKIR_0741 PF12833 Helix-turn-helix domain ASKIR_0741 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ASKIR_0742 PF00464 Serine hydroxymethyltransferase ASKIR_0747 PF00571 CBS domain ASKIR_0747 PF03471 Transporter associated domain ASKIR_0747 PF01595 Cyclin M transmembrane N-terminal domain ASKIR_0748 PF01594 AI-2E family transporter ASKIR_0751 PF02899 Phage integrase, N-terminal SAM-like domain ASKIR_0751 PF00589 Phage integrase family ASKIR_0765 PF06616 BsuBI/PstI restriction endonuclease domain ASKIR_0765 PF17728 BsuBI/PstI restriction endonuclease HTH domain ASKIR_0766 PF07669 Eco57I restriction-modification methylase ASKIR_0767 PF02796 Helix-turn-helix domain of resolvase ASKIR_0767 PF00239 Resolvase, N terminal domain ASKIR_0779 PF01348 Type II intron maturase ASKIR_0779 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ASKIR_0785 PF02810 SEC-C motif ASKIR_0785 PF07517 SecA DEAD-like domain ASKIR_0785 PF01043 SecA preprotein cross-linking domain ASKIR_0785 PF07516 SecA Wing and Scaffold domain ASKIR_0788 PF00872 Transposase, Mutator family ASKIR_0795 PF04717 Type VI secretion system, phage-baseplate injector ASKIR_0796 PF05638 Type VI secretion system effector, Hcp ASKIR_0802 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ASKIR_0804 PF05947 Type VI secretion system, TssF ASKIR_0806 PF00004 ATPase family associated with various cellular activities (AAA) ASKIR_0806 PF07724 AAA domain (Cdc48 subfamily) ASKIR_0806 PF17871 AAA lid domain ASKIR_0806 PF10431 C-terminal, D2-small domain, of ClpB protein ASKIR_0809 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ASKIR_0811 PF06761 Intracellular multiplication and human macrophage-killing ASKIR_0811 PF14331 ImcF-related N-terminal domain ASKIR_0811 PF06744 Type VI secretion protein IcmF C-terminal ASKIR_0812 PF07714 Protein tyrosine kinase ASKIR_0813 PF04717 Type VI secretion system, phage-baseplate injector ASKIR_0814 PF00182 Chitinase class I ASKIR_0818 PF00182 Chitinase class I ASKIR_0822 PF02899 Phage integrase, N-terminal SAM-like domain ASKIR_0822 PF00589 Phage integrase family ASKIR_0823 PF12320 Type 5 capsule protein repressor C-terminal domain ASKIR_0823 PF00149 Calcineurin-like phosphoesterase ASKIR_0824 PF13476 AAA domain ASKIR_0829 PF13195 Protein of unknown function (DUF4011) ASKIR_0829 PF13086 AAA domain ASKIR_0829 PF13087 AAA domain ASKIR_0833 PF13614 AAA domain ASKIR_0843 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ASKIR_0844 PF01029 NusB family ASKIR_0845 PF00885 6,7-dimethyl-8-ribityllumazine synthase ASKIR_0847 PF00793 DAHP synthetase I family ASKIR_0849 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ASKIR_0851 PF03631 Virulence factor BrkB ASKIR_0852 PF01565 FAD binding domain ASKIR_0852 PF02913 FAD linked oxidases, C-terminal domain ASKIR_0854 PF00578 AhpC/TSA family ASKIR_0855 PF13649 Methyltransferase domain ASKIR_0857 PF01728 FtsJ-like methyltransferase ASKIR_0857 PF01479 S4 domain ASKIR_0861 PF09186 Domain of unknown function (DUF1949) ASKIR_0861 PF01205 Uncharacterized protein family UPF0029 ASKIR_0865 PF02568 Thiamine biosynthesis protein (ThiI) ASKIR_0865 PF02926 THUMP domain ASKIR_0868 PF12823 Domain of unknown function (DUF3817) ASKIR_0882 PF01867 CRISPR associated protein Cas1 ASKIR_0883 PF09827 CRISPR associated protein Cas2 ASKIR_0889 PF01145 SPFH domain / Band 7 family ASKIR_0900 PF00270 DEAD/DEAH box helicase ASKIR_0900 PF00271 Helicase conserved C-terminal domain ASKIR_0900 PF17764 3′ DNA-binding domain (3′BD) ASKIR_0900 PF18074 Primosomal protein N C-terminal domain ASKIR_0900 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ASKIR_0901 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ASKIR_0901 PF14602 Hexapeptide repeat of succinyl-transferase ASKIR_0902 PF12848 ABC transporter ASKIR_0902 PF00005 ABC transporter ASKIR_0908 PF00437 Type II/IV secretion system protein ASKIR_0917 PF12399 Branched-chain amino acid ATP-binding cassette transporter ASKIR_0917 PF00005 ABC transporter ASKIR_0919 PF00591 Glycosyl transferase family, a/b domain ASKIR_0919 PF02885 Glycosyl transferase family, helical bundle domain ASKIR_0920 PF01479 S4 domain ASKIR_0921 PF00764 Arginosuccinate synthase ASKIR_0922 PF00132 Bacterial transferase hexapeptide (six repeats) ASKIR_0924 PF02028 BCCT, betaine/carnitine/choline family transporter ASKIR_0925 PF07690 Major Facilitator Superfamily ASKIR_0926 PF00216 Bacterial DNA-binding protein ASKIR_0927 PF03372 Endonuclease/Exonuclease/phosphatase family ASKIR_0931 PF03480 Bacterial extracellular solute-binding protein, family 7 ASKIR_0932 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ASKIR_0933 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ASKIR_0934 PF08448 PAS fold ASKIR_0934 PF08447 PAS fold ASKIR_0934 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_0935 PF00072 Response regulator receiver domain ASKIR_0937 PF00342 Phosphoglucose isomerase ASKIR_0938 PF00483 Nucleotidyl transferase ASKIR_0939 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ASKIR_0939 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ASKIR_0939 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ASKIR_0939 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ASKIR_0945 PF00137 ATP synthase subunit C ASKIR_0950 PF04116 Fatty acid hydroxylase superfamily ASKIR_0951 PF03150 Di-haem cytochrome c peroxidase ASKIR_0953 PF17760 UvrA interaction domain ASKIR_0953 PF17755 UvrA DNA-binding domain ASKIR_0954 PF09107 Elongation factor SelB, winged helix ASKIR_0954 PF09106 Elongation factor SelB, winged helix ASKIR_0954 PF09105 Elongation factor SelB, winged helix ASKIR_0954 PF00009 Elongation factor Tu GTP binding domain ASKIR_0954 PF03144 Elongation factor Tu domain 2 ASKIR_0955 PF03841 L-seryl-tRNA selenium transferase ASKIR_0960 PF10417 C-terminal domain of 1-Cys peroxiredoxin ASKIR_0960 PF00578 AhpC/TSA family ASKIR_0961 PF00672 HAMP domain ASKIR_0961 PF02203 Tar ligand binding domain homologue ASKIR_0961 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_0962 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_0962 PF08447 PAS fold ASKIR_0963 PF02769 AIR synthase related protein, C-terminal domain ASKIR_0963 PF00586 AIR synthase related protein, N-terminal domain ASKIR_0964 PF01841 Transglutaminase-like superfamily ASKIR_0968 PF00158 Sigma-54 interaction domain ASKIR_0968 PF02954 Bacterial regulatory protein, Fis family ASKIR_0968 PF00072 Response regulator receiver domain ASKIR_0969 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_0969 PF00512 His Kinase A (phospho-acceptor) domain ASKIR_0975 PF13247 4Fe-4S dicluster domain ASKIR_0977 PF02634 FdhD/NarQ family ASKIR_0981 PF00994 Probable molybdopterin binding domain ASKIR_0981 PF03454 MoeA C-terminal region (domain IV) ASKIR_0981 PF03453 MoeA N-terminal region (domain I and II) ASKIR_0982 PF12849 PBP superfamily domain ASKIR_0983 PF00528 Binding-protein-dependent transport system inner membrane component ASKIR_0984 PF00005 ABC transporter ASKIR_0986 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASKIR_0986 PF10518 TAT (twin-arginine translocation) pathway signal sequence ASKIR_0986 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding ASKIR_0988 PF00072 Response regulator receiver domain ASKIR_0988 PF00990 Diguanylate cyclase, GGDEF domain ASKIR_0989 PF00664 ABC transporter transmembrane region ASKIR_0989 PF00005 ABC transporter ASKIR_0991 PF00561 alpha/beta hydrolase fold ASKIR_0994 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ASKIR_0996 PF00117 Glutamine amidotransferase class-I ASKIR_0996 PF00958 GMP synthase C terminal domain ASKIR_0996 PF02540 NAD synthase ASKIR_0997 PF00890 FAD binding domain ASKIR_0997 PF02910 Fumarate reductase flavoprotein C-term ASKIR_1000 PF00155 Aminotransferase class I and II ASKIR_1001 PF02254 TrkA-N domain ASKIR_1001 PF00999 Sodium/hydrogen exchanger family ASKIR_1001 PF02080 TrkA-C domain ASKIR_1003 PF02600 Disulfide bond formation protein DsbB ASKIR_1004 PF06965 Na+/H+ antiporter 1 ASKIR_1004 PF13462 Thioredoxin ASKIR_1008 PF13419 Haloacid dehalogenase-like hydrolase ASKIR_1009 PF03641 Possible lysine decarboxylase ASKIR_1013 PF01476 LysM domain ASKIR_1013 PF08525 Opacity-associated protein A N-terminal motif ASKIR_1013 PF01551 Peptidase family M23 ASKIR_1014 PF01709 Transcriptional regulator ASKIR_1015 PF07669 Eco57I restriction-modification methylase ASKIR_1018 PF02535 ZIP Zinc transporter ASKIR_1019 PF06434 Aconitate hydratase 2 N-terminus ASKIR_1019 PF11791 Aconitate B N-terminal domain ASKIR_1019 PF00330 Aconitase family (aconitate hydratase) ASKIR_1020 PF02867 Ribonucleotide reductase, barrel domain ASKIR_1020 PF00317 Ribonucleotide reductase, all-alpha domain ASKIR_1020 PF03477 ATP cone domain ASKIR_1028 PF00925 GTP cyclohydrolase II ASKIR_1028 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ASKIR_1029 PF01293 Phosphoenolpyruvate carboxykinase ASKIR_1030 PF02436 Conserved carboxylase domain ASKIR_1030 PF00682 HMGL-like ASKIR_1030 PF00364 Biotin-requiring enzyme ASKIR_1034 PF09334 tRNA synthetases class I (M) ASKIR_1034 PF01588 Putative tRNA binding domain ASKIR_1034 PF00133 tRNA synthetases class I (I, L, M and V) ASKIR_1036 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ASKIR_1041 PF00749 tRNA synthetases class I (E and Q), catalytic domain ASKIR_1042 PF05193 Peptidase M16 inactive domain ASKIR_1043 PF04055 Radical SAM superfamily ASKIR_1044 PF01103 Surface antigen ASKIR_1044 PF07244 Surface antigen variable number repeat ASKIR_1045 PF01842 ACT domain ASKIR_1045 PF02153 Prephenate dehydrogenase ASKIR_1046 PF00255 Glutathione peroxidase ASKIR_1047 PF00106 short chain dehydrogenase ASKIR_1050 PF01593 Flavin containing amine oxidoreductase ASKIR_1054 PF00809 Pterin binding enzyme ASKIR_1057 PF13840 ACT domain ASKIR_1057 PF01842 ACT domain ASKIR_1057 PF00696 Amino acid kinase family ASKIR_1058 PF00293 NUDIX domain ASKIR_1059 PF04055 Radical SAM superfamily ASKIR_1059 PF06969 HemN C-terminal domain ASKIR_1060 PF05175 Methyltransferase small domain ASKIR_1060 PF17827 PrmC N-terminal domain ASKIR_1061 PF01432 Peptidase family M3 ASKIR_1064 PF18644 Phage integrase SAM-like domain ASKIR_1064 PF00589 Phage integrase family ASKIR_1065 PF01339 CheB methylesterase ASKIR_1065 PF00072 Response regulator receiver domain ASKIR_1066 PF03975 CheD chemotactic sensory transduction ASKIR_1067 PF01739 CheR methyltransferase, SAM binding domain ASKIR_1067 PF03705 CheR methyltransferase, all-alpha domain ASKIR_1068 PF01584 CheW-like domain ASKIR_1068 PF09078 CheY binding ASKIR_1068 PF02895 Signal transducing histidine kinase, homodimeric domain ASKIR_1068 PF01627 Hpt domain ASKIR_1068 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_1069 PF00072 Response regulator receiver domain ASKIR_1070 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ASKIR_1070 PF00575 S1 RNA binding domain ASKIR_1070 PF03725 3' exoribonuclease family, domain 2 ASKIR_1070 PF01138 3' exoribonuclease family, domain 1 ASKIR_1070 PF00013 KH domain ASKIR_1072 PF03968 OstA-like protein ASKIR_1072 PF04453 LPS transport system D ASKIR_1074 PF02844 Phosphoribosylglycinamide synthetase, N domain ASKIR_1074 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ASKIR_1074 PF02843 Phosphoribosylglycinamide synthetase, C domain ASKIR_1076 PF01926 50S ribosome-binding GTPase ASKIR_1076 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ASKIR_1077 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ASKIR_1077 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ASKIR_1080 PF17854 FtsK alpha domain ASKIR_1080 PF09397 Ftsk gamma domain ASKIR_1080 PF01580 FtsK/SpoIIIE family ASKIR_1081 PF00132 Bacterial transferase hexapeptide (six repeats) ASKIR_1081 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ASKIR_1082 PF10369 Small subunit of acetolactate synthase ASKIR_1083 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASKIR_1083 PF00205 Thiamine pyrophosphate enzyme, central domain ASKIR_1083 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASKIR_1085 PF02541 Ppx/GppA phosphatase family ASKIR_1086 PF01066 CDP-alcohol phosphatidyltransferase ASKIR_1090 PF01171 PP-loop family ASKIR_1092 PF03453 MoeA N-terminal region (domain I and II) ASKIR_1092 PF00994 Probable molybdopterin binding domain ASKIR_1092 PF03454 MoeA C-terminal region (domain IV) ASKIR_1094 PF01435 Peptidase family M48 ASKIR_1094 PF16491 CAAX prenyl protease N-terminal, five membrane helices ASKIR_1095 PF13091 PLD-like domain ASKIR_1096 PF03061 Thioesterase superfamily ASKIR_1098 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ASKIR_1099 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ASKIR_1100 PF02540 NAD synthase ASKIR_1103 PF05099 Tellurite resistance protein TerB ASKIR_1103 PF00226 DnaJ domain ASKIR_1104 PF02416 mttA/Hcf106 family ASKIR_1105 PF00902 Sec-independent protein translocase protein (TatC) ASKIR_1106 PF02547 Queuosine biosynthesis protein ASKIR_1114 PF01790 Prolipoprotein diacylglyceryl transferase ASKIR_1117 PF02203 Tar ligand binding domain homologue ASKIR_1117 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_1117 PF00672 HAMP domain ASKIR_1118 PF02092 Glycyl-tRNA synthetase beta subunit ASKIR_1122 PF02527 rRNA small subunit methyltransferase G ASKIR_1123 PF00925 GTP cyclohydrolase II ASKIR_1124 PF00490 Delta-aminolevulinic acid dehydratase ASKIR_1125 PF08448 PAS fold ASKIR_1125 PF08447 PAS fold ASKIR_1125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_1126 PF00486 Transcriptional regulatory protein, C terminal ASKIR_1126 PF00072 Response regulator receiver domain ASKIR_1127 PF16363 GDP-mannose 4,6 dehydratase ASKIR_1128 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ASKIR_1130 PF02397 Bacterial sugar transferase ASKIR_1133 PF00535 Glycosyl transferase family 2 ASKIR_1134 PF00535 Glycosyl transferase family 2 ASKIR_1135 PF05045 Rhamnan synthesis protein F ASKIR_1135 PF14307 Glycosyltransferase WbsX ASKIR_1136 PF14602 Hexapeptide repeat of succinyl-transferase ASKIR_1136 PF12464 Maltose acetyltransferase ASKIR_1138 PF01943 Polysaccharide biosynthesis protein ASKIR_1138 PF14667 Polysaccharide biosynthesis C-terminal domain ASKIR_1144 PF16363 GDP-mannose 4,6 dehydratase ASKIR_1149 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ASKIR_1150 PF00132 Bacterial transferase hexapeptide (six repeats) ASKIR_1151 PF05523 WxcM-like, C-terminal ASKIR_1152 PF16363 GDP-mannose 4,6 dehydratase ASKIR_1154 PF04321 RmlD substrate binding domain ASKIR_1155 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ASKIR_1156 PF00483 Nucleotidyl transferase ASKIR_1162 PF00248 Aldo/keto reductase family ASKIR_1167 PF13662 Toprim domain ASKIR_1167 PF02132 RecR protein ASKIR_1168 PF00684 DnaJ central domain ASKIR_1168 PF00226 DnaJ domain ASKIR_1168 PF01556 DnaJ C terminal domain ASKIR_1170 PF13244 Domain of unknown function (DUF4040) ASKIR_1170 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ASKIR_1170 PF00361 Proton-conducting membrane transporter ASKIR_1170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ASKIR_1171 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ASKIR_1172 PF00361 Proton-conducting membrane transporter ASKIR_1173 PF01899 Na+/H+ ion antiporter subunit ASKIR_1174 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ASKIR_1175 PF03334 Na+/H+ antiporter subunit ASKIR_1177 PF00753 Metallo-beta-lactamase superfamily ASKIR_1179 PF08003 Protein of unknown function (DUF1698) ASKIR_1180 PF01546 Peptidase family M20/M25/M40 ASKIR_1180 PF07687 Peptidase dimerisation domain ASKIR_1181 PF01578 Cytochrome C assembly protein ASKIR_1181 PF05140 ResB-like family ASKIR_1182 PF14480 DNA polymerase III polC-type N-terminus I ASKIR_1182 PF11490 DNA polymerase III polC-type N-terminus II ASKIR_1182 PF07733 Bacterial DNA polymerase III alpha NTPase domain ASKIR_1182 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ASKIR_1182 PF14579 Helix-hairpin-helix motif ASKIR_1182 PF02811 PHP domain ASKIR_1182 PF00929 Exonuclease ASKIR_1183 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ASKIR_1184 PF00834 Ribulose-phosphate 3 epimerase family ASKIR_1185 PF02253 Phospholipase A1 ASKIR_1187 PF00293 NUDIX domain ASKIR_1188 PF04461 Protein of unknown function (DUF520) ASKIR_1189 PF04241 Protein of unknown function (DUF423) ASKIR_1190 PF00156 Phosphoribosyl transferase domain ASKIR_1191 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ASKIR_1191 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ASKIR_1192 PF06969 HemN C-terminal domain ASKIR_1192 PF04055 Radical SAM superfamily ASKIR_1194 PF01113 Dihydrodipicolinate reductase, N-terminus ASKIR_1194 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain ASKIR_1195 PF00005 ABC transporter ASKIR_1197 PF00571 CBS domain ASKIR_1197 PF03471 Transporter associated domain ASKIR_1197 PF01595 Cyclin M transmembrane N-terminal domain ASKIR_1198 PF01713 Smr domain ASKIR_1198 PF00488 MutS domain V ASKIR_1199 PF00994 Probable molybdopterin binding domain ASKIR_1201 PF17862 AAA+ lid domain ASKIR_1201 PF06480 FtsH Extracellular ASKIR_1201 PF01434 Peptidase family M41 ASKIR_1201 PF00004 ATPase family associated with various cellular activities (AAA) ASKIR_1202 PF04055 Radical SAM superfamily ASKIR_1202 PF00919 Uncharacterized protein family UPF0004 ASKIR_1204 PF01761 3-dehydroquinate synthase ASKIR_1206 PF01032 FecCD transport family ASKIR_1207 PF00005 ABC transporter ASKIR_1208 PF01497 Periplasmic binding protein ASKIR_1209 PF07715 TonB-dependent Receptor Plug Domain ASKIR_1209 PF00593 TonB dependent receptor ASKIR_1212 PF13419 Haloacid dehalogenase-like hydrolase ASKIR_1213 PF01479 S4 domain ASKIR_1213 PF00849 RNA pseudouridylate synthase ASKIR_1214 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ASKIR_1220 PF00075 RNase H ASKIR_1221 PF16326 ABC transporter C-terminal domain ASKIR_1221 PF00005 ABC transporter ASKIR_1221 PF12848 ABC transporter ASKIR_1223 PF01551 Peptidase family M23 ASKIR_1223 PF04225 Opacity-associated protein A LysM-like domain ASKIR_1225 PF00218 Indole-3-glycerol phosphate synthase ASKIR_1227 PF03692 Putative zinc- or iron-chelating domain ASKIR_1228 PF05175 Methyltransferase small domain ASKIR_1230 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ASKIR_1230 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ASKIR_1230 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ASKIR_1231 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASKIR_1235 PF01043 SecA preprotein cross-linking domain ASKIR_1235 PF07516 SecA Wing and Scaffold domain ASKIR_1235 PF07517 SecA DEAD-like domain ASKIR_1235 PF02810 SEC-C motif ASKIR_1235 PF00271 Helicase conserved C-terminal domain ASKIR_1236 PF02687 FtsX-like permease family ASKIR_1236 PF12704 MacB-like periplasmic core domain ASKIR_1239 PF03971 Monomeric isocitrate dehydrogenase ASKIR_1244 PF01795 MraW methylase family ASKIR_1246 PF00216 Bacterial DNA-binding protein ASKIR_1249 PF00106 short chain dehydrogenase ASKIR_1253 PF12911 N-terminal TM domain of oligopeptide transport permease C ASKIR_1253 PF00528 Binding-protein-dependent transport system inner membrane component ASKIR_1255 PF01966 HD domain ASKIR_1255 PF00013 KH domain ASKIR_1255 PF12072 Domain of unknown function (DUF3552) ASKIR_1256 PF01812 5-formyltetrahydrofolate cyclo-ligase family ASKIR_1258 PF00448 SRP54-type protein, GTPase domain ASKIR_1261 PF18073 Rubredoxin metal binding domain ASKIR_1262 PF03741 Integral membrane protein TerC family ASKIR_1263 PF00817 impB/mucB/samB family ASKIR_1263 PF11799 impB/mucB/samB family C-terminal domain ASKIR_1263 PF11798 IMS family HHH motif ASKIR_1265 PF00672 HAMP domain ASKIR_1265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_1265 PF00512 His Kinase A (phospho-acceptor) domain ASKIR_1265 PF13426 PAS domain ASKIR_1266 PF00486 Transcriptional regulatory protein, C terminal ASKIR_1266 PF00072 Response regulator receiver domain ASKIR_1268 PF02690 Na+/Pi-cotransporter ASKIR_1270 PF05525 Branched-chain amino acid transport protein ASKIR_1271 PF00588 SpoU rRNA Methylase family ASKIR_1272 PF01842 ACT domain ASKIR_1272 PF00551 Formyl transferase ASKIR_1273 PF01515 Phosphate acetyl/butaryl transferase ASKIR_1273 PF03949 Malic enzyme, NAD binding domain ASKIR_1273 PF00390 Malic enzyme, N-terminal domain ASKIR_1274 PF02578 Multi-copper polyphenol oxidoreductase laccase ASKIR_1276 PF08501 Shikimate dehydrogenase substrate binding domain ASKIR_1278 PF01312 FlhB HrpN YscU SpaS Family ASKIR_1280 PF00270 DEAD/DEAH box helicase ASKIR_1280 PF00271 Helicase conserved C-terminal domain ASKIR_1280 PF00570 HRDC domain ASKIR_1280 PF16124 RecQ zinc-binding ASKIR_1280 PF09382 RQC domain ASKIR_1281 PF00589 Phage integrase family ASKIR_1281 PF12167 Arm DNA-binding domain ASKIR_1292 PF00145 C-5 cytosine-specific DNA methylase ASKIR_1309 PF00436 Single-strand binding protein family ASKIR_1312 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ASKIR_1319 PF03743 Bacterial conjugation TrbI-like protein ASKIR_1321 PF00437 Type II/IV secretion system protein ASKIR_1326 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASKIR_1326 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ASKIR_1326 PF02142 MGS-like domain ASKIR_1327 PF02609 Exonuclease VII small subunit ASKIR_1328 PF00561 alpha/beta hydrolase fold ASKIR_1330 PF04143 Sulphur transport ASKIR_1331 PF00091 Tubulin/FtsZ family, GTPase domain ASKIR_1331 PF12327 FtsZ family, C-terminal domain ASKIR_1332 PF02491 SHS2 domain inserted in FTSA ASKIR_1334 PF14490 Helix-hairpin-helix containing domain ASKIR_1334 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ASKIR_1334 PF13538 UvrD-like helicase C-terminal domain ASKIR_1336 PF00271 Helicase conserved C-terminal domain ASKIR_1336 PF00270 DEAD/DEAH box helicase ASKIR_1338 PF03738 Glutathionylspermidine synthase preATP-grasp ASKIR_1339 PF03061 Thioesterase superfamily ASKIR_1340 PF01351 Ribonuclease HII ASKIR_1342 PF00005 ABC transporter ASKIR_1342 PF12704 MacB-like periplasmic core domain ASKIR_1342 PF02687 FtsX-like permease family ASKIR_1343 PF02687 FtsX-like permease family ASKIR_1343 PF00005 ABC transporter ASKIR_1343 PF12704 MacB-like periplasmic core domain ASKIR_1344 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ASKIR_1346 PF01618 MotA/TolQ/ExbB proton channel family ASKIR_1347 PF02472 Biopolymer transport protein ExbD/TolR ASKIR_1349 PF00883 Cytosol aminopeptidase family, catalytic domain ASKIR_1349 PF02789 Cytosol aminopeptidase family, N-terminal domain ASKIR_1351 PF00291 Pyridoxal-phosphate dependent enzyme ASKIR_1352 PF00156 Phosphoribosyl transferase domain ASKIR_1353 PF01068 ATP dependent DNA ligase domain ASKIR_1353 PF14743 DNA ligase OB-like domain ASKIR_1354 PF01053 Cys/Met metabolism PLP-dependent enzyme ASKIR_1355 PF01053 Cys/Met metabolism PLP-dependent enzyme ASKIR_1360 PF03824 High-affinity nickel-transport protein ASKIR_1361 PF01297 Zinc-uptake complex component A periplasmic ASKIR_1363 PF00696 Amino acid kinase family ASKIR_1364 PF01192 RNA polymerase Rpb6 ASKIR_1365 PF13291 ACT domain ASKIR_1365 PF04607 Region found in RelA / SpoT proteins ASKIR_1365 PF02824 TGS domain ASKIR_1366 PF01479 S4 domain ASKIR_1366 PF00579 tRNA synthetases class I (W and Y) ASKIR_1368 PF01520 N-acetylmuramoyl-L-alanine amidase ASKIR_1371 PF01195 Peptidyl-tRNA hydrolase ASKIR_1372 PF01386 Ribosomal L25p family ASKIR_1372 PF14693 Ribosomal protein TL5, C-terminal domain ASKIR_1373 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ASKIR_1373 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ASKIR_1374 PF10502 Signal peptidase, peptidase S26 ASKIR_1375 PF02502 Ribose/Galactose Isomerase ASKIR_1378 PF10576 Iron-sulfur binding domain of endonuclease III ASKIR_1378 PF00633 Helix-hairpin-helix motif ASKIR_1378 PF00730 HhH-GPD superfamily base excision DNA repair protein ASKIR_1379 PF00512 His Kinase A (phospho-acceptor) domain ASKIR_1379 PF18415 Histidine kinase receptor ArcB trans-membrane domain ASKIR_1379 PF01627 Hpt domain ASKIR_1379 PF00989 PAS fold ASKIR_1379 PF00072 Response regulator receiver domain ASKIR_1379 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_1380 PF00563 EAL domain ASKIR_1380 PF01590 GAF domain ASKIR_1380 PF00990 Diguanylate cyclase, GGDEF domain ASKIR_1380 PF00360 Phytochrome region ASKIR_1381 PF17757 UvrB interaction domain ASKIR_1381 PF12344 Ultra-violet resistance protein B ASKIR_1381 PF02151 UvrB/uvrC motif ASKIR_1381 PF04851 Type III restriction enzyme, res subunit ASKIR_1381 PF00271 Helicase conserved C-terminal domain ASKIR_1383 PF01272 Transcription elongation factor, GreA/GreB, C-term ASKIR_1383 PF03449 Transcription elongation factor, N-terminal ASKIR_1384 PF00899 ThiF family ASKIR_1385 PF01584 CheW-like domain ASKIR_1385 PF00072 Response regulator receiver domain ASKIR_1386 PF14698 Argininosuccinate lyase C-terminal ASKIR_1386 PF00206 Lyase ASKIR_1387 PF00990 Diguanylate cyclase, GGDEF domain ASKIR_1388 PF03448 MgtE intracellular N domain ASKIR_1388 PF01769 Divalent cation transporter ASKIR_1388 PF00571 CBS domain ASKIR_1389 PF04324 BFD-like [2Fe-2S] binding domain ASKIR_1389 PF01592 NifU-like N terminal domain ASKIR_1389 PF01106 NifU-like domain ASKIR_1390 PF01458 Uncharacterized protein family (UPF0051) ASKIR_1391 PF00005 ABC transporter ASKIR_1392 PF01458 Uncharacterized protein family (UPF0051) ASKIR_1393 PF00266 Aminotransferase class-V ASKIR_1394 PF02657 Fe-S metabolism associated domain ASKIR_1395 PF01883 Iron-sulfur cluster assembly protein ASKIR_1399 PF05538 Campylobacter major outer membrane protein ASKIR_1400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASKIR_1400 PF02785 Biotin carboxylase C-terminal domain ASKIR_1400 PF00289 Biotin carboxylase, N-terminal domain ASKIR_1402 PF04221 RelB antitoxin ASKIR_1406 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_1406 PF08447 PAS fold ASKIR_1406 PF13426 PAS domain ASKIR_1408 PF00004 ATPase family associated with various cellular activities (AAA) ASKIR_1408 PF05362 Lon protease (S16) C-terminal proteolytic domain ASKIR_1408 PF02190 ATP-dependent protease La (LON) substrate-binding domain ASKIR_1410 PF03807 NADP oxidoreductase coenzyme F420-dependent ASKIR_1410 PF14748 Pyrroline-5-carboxylate reductase dimerisation ASKIR_1414 PF01725 Ham1 family ASKIR_1415 PF07690 Major Facilitator Superfamily ASKIR_1418 PF08264 Anticodon-binding domain of tRNA ASKIR_1418 PF00133 tRNA synthetases class I (I, L, M and V) ASKIR_1418 PF10458 Valyl tRNA synthetase tRNA binding arm ASKIR_1422 PF00120 Glutamine synthetase, catalytic domain ASKIR_1422 PF03951 Glutamine synthetase, beta-Grasp domain ASKIR_1424 PF02391 MoaE protein ASKIR_1426 PF02621 Menaquinone biosynthesis ASKIR_1427 PF02673 Bacitracin resistance protein BacA ASKIR_1429 PF13173 AAA domain ASKIR_1429 PF13635 Domain of unknown function (DUF4143) ASKIR_1430 PF03033 Glycosyltransferase family 28 N-terminal domain ASKIR_1430 PF04101 Glycosyltransferase family 28 C-terminal domain ASKIR_1431 PF01098 Cell cycle protein ASKIR_1432 PF03793 PASTA domain ASKIR_1432 PF03717 Penicillin-binding Protein dimerisation domain ASKIR_1432 PF00905 Penicillin binding protein transpeptidase domain ASKIR_1433 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ASKIR_1442 PF01208 Uroporphyrinogen decarboxylase (URO-D) ASKIR_1444 PF01118 Semialdehyde dehydrogenase, NAD binding domain ASKIR_1444 PF02774 Semialdehyde dehydrogenase, dimerisation domain ASKIR_1445 PF03989 DNA gyrase C-terminal domain, beta-propeller ASKIR_1445 PF00521 DNA gyrase/topoisomerase IV, subunit A ASKIR_1447 PF01960 ArgJ family ASKIR_1449 PF00830 Ribosomal L28 family ASKIR_1451 PF08645 Polynucleotide kinase 3 phosphatase ASKIR_1452 PF01370 NAD dependent epimerase/dehydratase family ASKIR_1453 PF01467 Cytidylyltransferase-like ASKIR_1453 PF00294 pfkB family carbohydrate kinase ASKIR_1454 PF13580 SIS domain ASKIR_1456 PF00884 Sulfatase ASKIR_1460 PF00535 Glycosyl transferase family 2 ASKIR_1461 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ASKIR_1461 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ASKIR_1466 PF04488 Glycosyltransferase sugar-binding region containing DXD motif ASKIR_1467 PF01219 Prokaryotic diacylglycerol kinase ASKIR_1469 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ASKIR_1470 PF02541 Ppx/GppA phosphatase family ASKIR_1471 PF00037 4Fe-4S binding domain ASKIR_1472 PF00459 Inositol monophosphatase family ASKIR_1475 PF00263 Bacterial type II and III secretion system protein ASKIR_1475 PF03958 Bacterial type II/III secretion system short domain ASKIR_1477 PF08245 Mur ligase middle domain ASKIR_1477 PF02875 Mur ligase family, glutamate ligase domain ASKIR_1479 PF07478 D-ala D-ala ligase C-terminus ASKIR_1479 PF01820 D-ala D-ala ligase N-terminus ASKIR_1480 PF07499 RuvA, C-terminal domain ASKIR_1480 PF01330 RuvA N terminal domain ASKIR_1481 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_1481 PF02203 Tar ligand binding domain homologue ASKIR_1481 PF00672 HAMP domain ASKIR_1483 PF01142 tRNA pseudouridine synthase D (TruD) ASKIR_1484 PF00586 AIR synthase related protein, N-terminal domain ASKIR_1484 PF02769 AIR synthase related protein, C-terminal domain ASKIR_1485 PF06865 Pyrimidine/purine nucleoside phosphorylase ASKIR_1488 PF08668 HDOD domain ASKIR_1489 PF01926 50S ribosome-binding GTPase ASKIR_1489 PF06071 Protein of unknown function (DUF933) ASKIR_1490 PF02554 Carbon starvation protein CstA ASKIR_1490 PF13722 5TM C-terminal transporter carbon starvation CstA ASKIR_1494 PF07963 Prokaryotic N-terminal methylation motif ASKIR_1494 PF08334 Type II secretion system (T2SS), protein G ASKIR_1495 PF03796 DnaB-like helicase C terminal domain ASKIR_1495 PF00772 DnaB-like helicase N terminal domain ASKIR_1496 PF04551 GcpE protein ASKIR_1497 PF08448 PAS fold ASKIR_1497 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_1497 PF08447 PAS fold ASKIR_1499 PF00152 tRNA synthetases class II (D, K and N) ASKIR_1499 PF01336 OB-fold nucleic acid binding domain ASKIR_1500 PF00464 Serine hydroxymethyltransferase ASKIR_1502 PF04715 Anthranilate synthase component I, N terminal region ASKIR_1502 PF00425 chorismate binding enzyme ASKIR_1503 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ASKIR_1504 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ASKIR_1506 PF00990 Diguanylate cyclase, GGDEF domain ASKIR_1506 PF08448 PAS fold ASKIR_1507 PF01435 Peptidase family M48 ASKIR_1509 PF00300 Histidine phosphatase superfamily (branch 1) ASKIR_1510 PF01926 50S ribosome-binding GTPase ASKIR_1510 PF12631 MnmE helical domain ASKIR_1510 PF10396 GTP-binding protein TrmE N-terminus ASKIR_1512 PF14849 YidC periplasmic domain ASKIR_1512 PF02096 60Kd inner membrane protein ASKIR_1513 PF01809 Putative membrane protein insertion efficiency factor ASKIR_1514 PF00825 Ribonuclease P ASKIR_1515 PF00468 Ribosomal protein L34 ASKIR_1516 PF10431 C-terminal, D2-small domain, of ClpB protein ASKIR_1516 PF02861 Clp amino terminal domain, pathogenicity island component ASKIR_1516 PF07724 AAA domain (Cdc48 subfamily) ASKIR_1516 PF00004 ATPase family associated with various cellular activities (AAA) ASKIR_1516 PF17871 AAA lid domain ASKIR_1532 PF13332 Hemagglutinin repeat ASKIR_1532 PF05860 haemagglutination activity domain ASKIR_1532 PF04829 Pre-toxin domain with VENN motif ASKIR_1532 PF05594 Haemagluttinin repeat ASKIR_1532 PF13332 Hemagglutinin repeat ASKIR_1532 PF05860 haemagglutination activity domain ASKIR_1532 PF15526 Novel toxin 21 ASKIR_1532 PF04829 Pre-toxin domain with VENN motif ASKIR_1532 PF05594 Haemagluttinin repeat ASKIR_1532 PF15526 Novel toxin 21 ASKIR_1533 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ASKIR_1533 PF17287 POTRA domain ASKIR_1533 PF08479 POTRA domain, ShlB-type ASKIR_1534 PF12848 ABC transporter ASKIR_1534 PF00005 ABC transporter ASKIR_1536 PF00881 Nitroreductase family ASKIR_1537 PF02525 Flavodoxin-like fold ASKIR_1541 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ASKIR_1541 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ASKIR_1541 PF02770 Acyl-CoA dehydrogenase, middle domain ASKIR_1543 PF03601 Conserved hypothetical protein 698 ASKIR_1544 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASKIR_1544 PF03466 LysR substrate binding domain ASKIR_1546 PF00893 Small Multidrug Resistance protein ASKIR_1547 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_1548 PF00486 Transcriptional regulatory protein, C terminal ASKIR_1548 PF00072 Response regulator receiver domain ASKIR_1550 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ASKIR_1558 PF00899 ThiF family ASKIR_1558 PF00581 Rhodanese-like domain ASKIR_1559 PF01594 AI-2E family transporter ASKIR_1560 PF17864 RuvB AAA lid domain ASKIR_1560 PF05491 RuvB C-terminal winged helix domain ASKIR_1560 PF05496 Holliday junction DNA helicase RuvB P-loop domain ASKIR_1561 PF02548 Ketopantoate hydroxymethyltransferase ASKIR_1562 PF00290 Tryptophan synthase alpha chain ASKIR_1563 PF04377 Arginine-tRNA-protein transferase, C terminus ASKIR_1563 PF04376 Arginine-tRNA-protein transferase, N terminus ASKIR_1564 PF07664 Ferrous iron transport protein B C terminus ASKIR_1564 PF02421 Ferrous iron transport protein B ASKIR_1564 PF07670 Nucleoside recognition ASKIR_1566 PF01475 Ferric uptake regulator family ASKIR_1568 PF01227 GTP cyclohydrolase I ASKIR_1569 PF01544 CorA-like Mg2+ transporter protein ASKIR_1570 PF00482 Type II secretion system (T2SS), protein F ASKIR_1571 PF00437 Type II/IV secretion system protein ASKIR_1574 PF07650 KH domain ASKIR_1574 PF01926 50S ribosome-binding GTPase ASKIR_1575 PF13335 Magnesium chelatase, subunit ChlI C-terminal ASKIR_1575 PF01078 Magnesium chelatase, subunit ChlI ASKIR_1576 PF02203 Tar ligand binding domain homologue ASKIR_1576 PF00672 HAMP domain ASKIR_1576 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_1577 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_1577 PF08447 PAS fold ASKIR_1579 PF01327 Polypeptide deformylase ASKIR_1580 PF00574 Clp protease ASKIR_1581 PF05697 Bacterial trigger factor protein (TF) ASKIR_1581 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ASKIR_1581 PF05698 Bacterial trigger factor protein (TF) C-terminus ASKIR_1582 PF03976 Polyphosphate kinase 2 (PPK2) ASKIR_1583 PF03976 Polyphosphate kinase 2 (PPK2) ASKIR_1584 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ASKIR_1585 PF16653 Saccharopine dehydrogenase C-terminal domain ASKIR_1585 PF03435 Saccharopine dehydrogenase NADP binding domain ASKIR_1594 PF00004 ATPase family associated with various cellular activities (AAA) ASKIR_1594 PF07724 AAA domain (Cdc48 subfamily) ASKIR_1594 PF17871 AAA lid domain ASKIR_1594 PF02861 Clp amino terminal domain, pathogenicity island component ASKIR_1594 PF10431 C-terminal, D2-small domain, of ClpB protein ASKIR_1595 PF02617 ATP-dependent Clp protease adaptor protein ClpS ASKIR_1598 PF13193 AMP-binding enzyme C-terminal domain ASKIR_1598 PF00501 AMP-binding enzyme ASKIR_1599 PF01575 MaoC like domain ASKIR_1607 PF14572 Phosphoribosyl synthetase-associated domain ASKIR_1607 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ASKIR_1608 PF00403 Heavy-metal-associated domain ASKIR_1609 PF00009 Elongation factor Tu GTP binding domain ASKIR_1609 PF00679 Elongation factor G C-terminus ASKIR_1609 PF03144 Elongation factor Tu domain 2 ASKIR_1609 PF06421 GTP-binding protein LepA C-terminus ASKIR_1610 PF00156 Phosphoribosyl transferase domain ASKIR_1611 PF00117 Glutamine amidotransferase class-I ASKIR_1612 PF00977 Histidine biosynthesis protein ASKIR_1613 PF00762 Ferrochelatase ASKIR_1614 PF00664 ABC transporter transmembrane region ASKIR_1614 PF03412 Peptidase C39 family ASKIR_1614 PF00005 ABC transporter ASKIR_1617 PF00403 Heavy-metal-associated domain ASKIR_1618 PF12792 CSS motif domain associated with EAL ASKIR_1618 PF00563 EAL domain ASKIR_1619 PF00625 Guanylate kinase ASKIR_1621 PF00005 ABC transporter ASKIR_1622 PF00889 Elongation factor TS ASKIR_1623 PF00318 Ribosomal protein S2 ASKIR_1624 PF02875 Mur ligase family, glutamate ligase domain ASKIR_1624 PF08245 Mur ligase middle domain ASKIR_1628 PF08264 Anticodon-binding domain of tRNA ASKIR_1628 PF00133 tRNA synthetases class I (I, L, M and V) ASKIR_1629 PF06039 Malate:quinone oxidoreductase (Mqo) ASKIR_1630 PF00994 Probable molybdopterin binding domain ASKIR_1630 PF02464 Competence-damaged protein ASKIR_1630 PF18146 Damage-inducible protein CinA KH domain ASKIR_1639 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_1640 PF00072 Response regulator receiver domain ASKIR_1640 PF00486 Transcriptional regulatory protein, C terminal ASKIR_1641 PF00474 Sodium:solute symporter family ASKIR_1643 PF07733 Bacterial DNA polymerase III alpha NTPase domain ASKIR_1643 PF00929 Exonuclease ASKIR_1643 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ASKIR_1643 PF14579 Helix-hairpin-helix motif ASKIR_1643 PF02811 PHP domain ASKIR_1645 PF00474 Sodium:solute symporter family ASKIR_1647 PF00474 Sodium:solute symporter family ASKIR_1649 PF07733 Bacterial DNA polymerase III alpha NTPase domain ASKIR_1649 PF14579 Helix-hairpin-helix motif ASKIR_1649 PF00929 Exonuclease ASKIR_1649 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ASKIR_1649 PF02811 PHP domain ASKIR_1651 PF00871 Acetokinase family ASKIR_1652 PF01515 Phosphate acetyl/butaryl transferase ASKIR_1653 PF00871 Acetokinase family ASKIR_1654 PF01343 Peptidase family S49 ASKIR_1655 PF01979 Amidohydrolase family ASKIR_1656 PF01220 Dehydroquinase class II ASKIR_1657 PF01321 Creatinase/Prolidase N-terminal domain ASKIR_1657 PF00557 Metallopeptidase family M24 ASKIR_1658 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ASKIR_1661 PF01613 Flavin reductase like domain ASKIR_1663 PF00771 FHIPEP family ASKIR_1665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASKIR_1665 PF18269 T3SS EscN ATPase C-terminal domain ASKIR_1667 PF01312 FlhB HrpN YscU SpaS Family ASKIR_1670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ASKIR_1670 PF00460 Flagella basal body rod protein ASKIR_1671 PF02049 Flagellar hook-basal body complex protein FliE ASKIR_1673 PF10609 NUBPL iron-transfer P-loop NTPase ASKIR_1674 PF00448 SRP54-type protein, GTPase domain ASKIR_1678 PF16973 Flagellar motor switch protein FliN N-terminal ASKIR_1678 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ASKIR_1682 PF07196 Flagellin hook IN motif ASKIR_1682 PF00460 Flagella basal body rod protein ASKIR_1683 PF07559 Flagellar basal body protein FlaE ASKIR_1683 PF00460 Flagella basal body rod protein ASKIR_1683 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ASKIR_1685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ASKIR_1687 PF01706 FliG C-terminal domain ASKIR_1687 PF14841 FliG middle domain ASKIR_1687 PF14842 FliG N-terminal domain ASKIR_1688 PF01514 Secretory protein of YscJ/FliF family ASKIR_1688 PF08345 Flagellar M-ring protein C-terminal ASKIR_1689 PF00460 Flagella basal body rod protein ASKIR_1690 PF00460 Flagella basal body rod protein ASKIR_1690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ASKIR_1692 PF00072 Response regulator receiver domain ASKIR_1693 PF00460 Flagella basal body rod protein ASKIR_1693 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ASKIR_1696 PF01782 RimM N-terminal domain ASKIR_1698 PF00886 Ribosomal protein S16 ASKIR_1699 PF00448 SRP54-type protein, GTPase domain ASKIR_1699 PF02978 Signal peptide binding domain ASKIR_1699 PF02881 SRP54-type protein, helical bundle domain ASKIR_1700 PF00849 RNA pseudouridylate synthase ASKIR_1701 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ASKIR_1701 PF02390 Putative methyltransferase ASKIR_1703 PF01784 NIF3 (NGG1p interacting factor 3) ASKIR_1704 PF02091 Glycyl-tRNA synthetase alpha subunit ASKIR_1706 PF00731 AIR carboxylase ASKIR_1708 PF01136 Peptidase family U32 ASKIR_1709 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_1709 PF17200 Single Cache domain 2 ASKIR_1709 PF00672 HAMP domain ASKIR_1710 PF13476 AAA domain ASKIR_1711 PF01513 ATP-NAD kinase ASKIR_1712 PF00679 Elongation factor G C-terminus ASKIR_1712 PF14492 Elongation Factor G, domain II ASKIR_1712 PF03764 Elongation factor G, domain IV ASKIR_1712 PF00009 Elongation factor Tu GTP binding domain ASKIR_1712 PF03144 Elongation factor Tu domain 2 ASKIR_1713 PF00177 Ribosomal protein S7p/S5e ASKIR_1714 PF00164 Ribosomal protein S12/S23 ASKIR_1717 PF00117 Glutamine amidotransferase class-I ASKIR_1718 PF13416 Bacterial extracellular solute-binding protein ASKIR_1719 PF00528 Binding-protein-dependent transport system inner membrane component ASKIR_1720 PF00005 ABC transporter ASKIR_1720 PF08402 TOBE domain ASKIR_1721 PF03960 ArsC family ASKIR_1722 PF00857 Isochorismatase family ASKIR_1723 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ASKIR_1723 PF03900 Porphobilinogen deaminase, C-terminal domain ASKIR_1724 PF13462 Thioredoxin ASKIR_1725 PF12169 DNA polymerase III subunits gamma and tau domain III ASKIR_1725 PF12170 DNA polymerase III tau subunit V interacting with alpha ASKIR_1726 PF01177 Asp/Glu/Hydantoin racemase ASKIR_1727 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ASKIR_1727 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ASKIR_1728 PF07497 Rho termination factor, RNA-binding domain ASKIR_1728 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASKIR_1728 PF07498 Rho termination factor, N-terminal domain ASKIR_1729 PF10417 C-terminal domain of 1-Cys peroxiredoxin ASKIR_1729 PF00578 AhpC/TSA family ASKIR_1731 PF00334 Nucleoside diphosphate kinase ASKIR_1733 PF01783 Ribosomal L32p protein family ASKIR_1734 PF02504 Fatty acid synthesis protein ASKIR_1735 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ASKIR_1735 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ASKIR_1737 PF00350 Dynamin family ASKIR_1738 PF00350 Dynamin family ASKIR_1739 PF13183 4Fe-4S dicluster domain ASKIR_1739 PF13085 2Fe-2S iron-sulfur cluster binding domain ASKIR_1740 PF00890 FAD binding domain ASKIR_1740 PF02910 Fumarate reductase flavoprotein C-term ASKIR_1741 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ASKIR_1742 PF00361 Proton-conducting membrane transporter ASKIR_1743 PF00361 Proton-conducting membrane transporter ASKIR_1744 PF00361 Proton-conducting membrane transporter ASKIR_1744 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ASKIR_1745 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ASKIR_1746 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ASKIR_1747 PF12838 4Fe-4S dicluster domain ASKIR_1748 PF00146 NADH dehydrogenase ASKIR_1749 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ASKIR_1749 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ASKIR_1749 PF00384 Molybdopterin oxidoreductase ASKIR_1750 PF00285 Citrate synthase, C-terminal domain ASKIR_1751 PF10531 SLBB domain ASKIR_1751 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ASKIR_1751 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ASKIR_1753 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ASKIR_1753 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ASKIR_1754 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ASKIR_1755 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ASKIR_1756 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ASKIR_1757 PF02203 Tar ligand binding domain homologue ASKIR_1757 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_1757 PF00672 HAMP domain ASKIR_1759 PF02203 Tar ligand binding domain homologue ASKIR_1759 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_1759 PF00672 HAMP domain ASKIR_1760 PF00990 Diguanylate cyclase, GGDEF domain ASKIR_1760 PF08495 FIST N domain ASKIR_1760 PF00563 EAL domain ASKIR_1760 PF10442 FIST C domain ASKIR_1761 PF13407 Periplasmic binding protein domain ASKIR_1762 PF12821 Threonine/Serine exporter, ThrE ASKIR_1762 PF06738 Putative threonine/serine exporter ASKIR_1763 PF06738 Putative threonine/serine exporter ASKIR_1763 PF12821 Threonine/Serine exporter, ThrE ASKIR_1765 PF03309 Type III pantothenate kinase ASKIR_1766 PF01634 ATP phosphoribosyltransferase ASKIR_1768 PF02203 Tar ligand binding domain homologue ASKIR_1768 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_1768 PF00672 HAMP domain ASKIR_1772 PF03734 L,D-transpeptidase catalytic domain ASKIR_1772 PF17969 L,D-transpeptidase C-terminal domain ASKIR_1773 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASKIR_1773 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASKIR_1776 PF00285 Citrate synthase, C-terminal domain ASKIR_1777 PF00330 Aconitase family (aconitate hydratase) ASKIR_1777 PF00694 Aconitase C-terminal domain ASKIR_1778 PF04303 PrpF protein ASKIR_1779 PF01464 Transglycosylase SLT domain ASKIR_1779 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ASKIR_1780 PF02887 Pyruvate kinase, alpha/beta domain ASKIR_1780 PF00224 Pyruvate kinase, barrel domain ASKIR_1780 PF00391 PEP-utilising enzyme, mobile domain ASKIR_1782 PF02021 Uncharacterised protein family UPF0102 ASKIR_1783 PF00155 Aminotransferase class I and II ASKIR_1784 PF00484 Carbonic anhydrase ASKIR_1786 PF04055 Radical SAM superfamily ASKIR_1788 PF04028 Domain of unknown function (DUF374) ASKIR_1789 PF04055 Radical SAM superfamily ASKIR_1789 PF01938 TRAM domain ASKIR_1789 PF00919 Uncharacterized protein family UPF0004 ASKIR_1791 PF13184 NusA-like KH domain ASKIR_1791 PF08529 NusA N-terminal domain ASKIR_1792 PF09190 DALR domain ASKIR_1792 PF01406 tRNA synthetases class I (C) catalytic domain ASKIR_1793 PF01084 Ribosomal protein S18 ASKIR_1794 PF00436 Single-strand binding protein family ASKIR_1795 PF01250 Ribosomal protein S6 ASKIR_1798 PF17876 Cold shock domain ASKIR_1798 PF08206 Ribonuclease B OB domain ASKIR_1798 PF00773 RNB domain ASKIR_1798 PF00575 S1 RNA binding domain ASKIR_1799 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ASKIR_1799 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ASKIR_1802 PF00156 Phosphoribosyl transferase domain ASKIR_1802 PF13537 Glutamine amidotransferase domain ASKIR_1803 PF05173 Dihydrodipicolinate reductase, C-terminus ASKIR_1803 PF01113 Dihydrodipicolinate reductase, N-terminus ASKIR_1804 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASKIR_1805 PF00085 Thioredoxin ASKIR_1806 PF02272 DHHA1 domain ASKIR_1806 PF01411 tRNA synthetases class II (A) ASKIR_1806 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ASKIR_1808 PF00593 TonB dependent receptor ASKIR_1808 PF07715 TonB-dependent Receptor Plug Domain ASKIR_1810 PF00072 Response regulator receiver domain ASKIR_1810 PF00486 Transcriptional regulatory protein, C terminal ASKIR_1811 PF17820 PDZ domain ASKIR_1811 PF13180 PDZ domain ASKIR_1812 PF00920 Dehydratase family ASKIR_1816 PF01258 Prokaryotic dksA/traR C4-type zinc finger ASKIR_1817 PF01142 tRNA pseudouridine synthase D (TruD) ASKIR_1818 PF15437 Plasminogen-binding protein pgbA C-terminal ASKIR_1820 PF03572 Peptidase family S41 ASKIR_1820 PF13180 PDZ domain ASKIR_1821 PF01259 SAICAR synthetase ASKIR_1822 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ASKIR_1825 PF01553 Acyltransferase ASKIR_1826 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ASKIR_1827 PF02416 mttA/Hcf106 family ASKIR_1828 PF05746 DALR anticodon binding domain ASKIR_1828 PF00750 tRNA synthetases class I (R) ASKIR_1828 PF03485 Arginyl tRNA synthetase N terminal domain ASKIR_1830 PF01467 Cytidylyltransferase-like ASKIR_1831 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ASKIR_1831 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ASKIR_1832 PF00162 Phosphoglycerate kinase ASKIR_1833 PF00121 Triosephosphate isomerase ASKIR_1835 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ASKIR_1835 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ASKIR_1836 PF01842 ACT domain ASKIR_1836 PF01817 Chorismate mutase type II ASKIR_1836 PF00800 Prephenate dehydratase ASKIR_1837 PF00155 Aminotransferase class I and II ASKIR_1838 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ASKIR_1838 PF02779 Transketolase, pyrimidine binding domain ASKIR_1838 PF02780 Transketolase, C-terminal domain ASKIR_1839 PF03150 Di-haem cytochrome c peroxidase ASKIR_1839 PF00034 Cytochrome c ASKIR_1841 PF02545 Maf-like protein ASKIR_1843 PF00939 Sodium:sulfate symporter transmembrane region ASKIR_1845 PF02683 Cytochrome C biogenesis protein transmembrane region ASKIR_1845 PF11412 Disulphide bond corrector protein DsbC ASKIR_1845 PF00085 Thioredoxin ASKIR_1846 PF00085 Thioredoxin ASKIR_1847 PF18030 RimK PreATP-grasp domain ASKIR_1847 PF08443 RimK-like ATP-grasp domain ASKIR_1850 PF00990 Diguanylate cyclase, GGDEF domain ASKIR_1850 PF10442 FIST C domain ASKIR_1850 PF08495 FIST N domain ASKIR_1850 PF00563 EAL domain ASKIR_1851 PF02666 Phosphatidylserine decarboxylase ASKIR_1854 PF06725 3D domain ASKIR_1854 PF03562 MltA specific insert domain ASKIR_1855 PF00012 Hsp70 protein ASKIR_1856 PF01025 GrpE ASKIR_1857 PF01628 HrcA protein C terminal domain ASKIR_1858 PF00005 ABC transporter ASKIR_1861 PF13190 PDGLE domain ASKIR_1861 PF01891 Cobalt uptake substrate-specific transmembrane region ASKIR_1863 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ASKIR_1864 PF00586 AIR synthase related protein, N-terminal domain ASKIR_1864 PF02769 AIR synthase related protein, C-terminal domain ASKIR_1865 PF01924 Hydrogenase formation hypA family ASKIR_1866 PF01455 HupF/HypC family ASKIR_1867 PF02492 CobW/HypB/UreG, nucleotide-binding domain ASKIR_1869 PF00708 Acylphosphatase ASKIR_1869 PF17788 HypF Kae1-like domain ASKIR_1869 PF01300 Telomere recombination ASKIR_1869 PF07503 HypF finger ASKIR_1871 PF01750 Hydrogenase maturation protease ASKIR_1872 PF01292 Prokaryotic cytochrome b561 ASKIR_1873 PF00374 Nickel-dependent hydrogenase ASKIR_1874 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ASKIR_1874 PF10518 TAT (twin-arginine translocation) pathway signal sequence ASKIR_1874 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal ASKIR_1875 PF01416 tRNA pseudouridine synthase ASKIR_1878 PF01255 Putative undecaprenyl diphosphate synthase ASKIR_1879 PF04127 DNA / pantothenate metabolism flavoprotein ASKIR_1879 PF02441 Flavoprotein ASKIR_1880 PF14602 Hexapeptide repeat of succinyl-transferase ASKIR_1880 PF12804 MobA-like NTP transferase domain ASKIR_1882 PF00271 Helicase conserved C-terminal domain ASKIR_1882 PF00270 DEAD/DEAH box helicase ASKIR_1882 PF17191 RecG wedge domain ASKIR_1883 PF05958 tRNA (Uracil-5-)-methyltransferase ASKIR_1884 PF00669 Bacterial flagellin N-terminal helical region ASKIR_1884 PF00700 Bacterial flagellin C-terminal helical region ASKIR_1884 PF07196 Flagellin hook IN motif ASKIR_1885 PF00700 Bacterial flagellin C-terminal helical region ASKIR_1885 PF07196 Flagellin hook IN motif ASKIR_1885 PF00669 Bacterial flagellin N-terminal helical region ASKIR_1890 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ASKIR_1891 PF08889 WbqC-like protein family ASKIR_1892 PF08241 Methyltransferase domain ASKIR_1896 PF01209 ubiE/COQ5 methyltransferase family ASKIR_1898 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ASKIR_1898 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ASKIR_1898 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ASKIR_1900 PF01501 Glycosyl transferase family 8 ASKIR_1900 PF00535 Glycosyl transferase family 2 ASKIR_1901 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ASKIR_1902 PF00132 Bacterial transferase hexapeptide (six repeats) ASKIR_1903 PF05523 WxcM-like, C-terminal ASKIR_1904 PF00465 Iron-containing alcohol dehydrogenase ASKIR_1908 PF13193 AMP-binding enzyme C-terminal domain ASKIR_1908 PF00501 AMP-binding enzyme ASKIR_1908 PF01553 Acyltransferase ASKIR_1912 PF02585 GlcNAc-PI de-N-acetylase ASKIR_1914 PF08666 SAF domain ASKIR_1914 PF03102 NeuB family ASKIR_1916 PF02348 Cytidylyltransferase ASKIR_1917 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ASKIR_1918 PF02719 Polysaccharide biosynthesis protein ASKIR_1920 PF00154 recA bacterial DNA recombination protein ASKIR_1921 PF00209 Sodium:neurotransmitter symporter family ASKIR_1922 PF01261 Xylose isomerase-like TIM barrel ASKIR_1923 PF00916 Sulfate permease family ASKIR_1923 PF01740 STAS domain ASKIR_1925 PF16450 Proteasomal ATPase OB C-terminal domain ASKIR_1925 PF17758 Proteasomal ATPase OB N-terminal domain ASKIR_1925 PF00004 ATPase family associated with various cellular activities (AAA) ASKIR_1927 PF02621 Menaquinone biosynthesis ASKIR_1928 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ASKIR_1930 PF01131 DNA topoisomerase ASKIR_1930 PF01751 Toprim domain ASKIR_1930 PF13368 Topoisomerase C-terminal repeat ASKIR_1932 PF06968 Biotin and Thiamin Synthesis associated domain ASKIR_1932 PF04055 Radical SAM superfamily ASKIR_1933 PF00113 Enolase, C-terminal TIM barrel domain ASKIR_1933 PF03952 Enolase, N-terminal domain ASKIR_1936 PF00145 C-5 cytosine-specific DNA methylase ASKIR_1940 PF09521 NgoPII restriction endonuclease ASKIR_1942 PF00145 C-5 cytosine-specific DNA methylase ASKIR_1945 PF00665 Integrase core domain ASKIR_1948 PF00004 ATPase family associated with various cellular activities (AAA) ASKIR_1951 PF02899 Phage integrase, N-terminal SAM-like domain ASKIR_1951 PF00589 Phage integrase family ASKIR_1954 PF13932 GidA associated domain ASKIR_1954 PF01134 Glucose inhibited division protein A ASKIR_1955 PF00677 Lumazine binding domain ASKIR_1958 PF06689 ClpX C4-type zinc finger ASKIR_1958 PF10431 C-terminal, D2-small domain, of ClpB protein ASKIR_1958 PF07724 AAA domain (Cdc48 subfamily) ASKIR_1959 PF00132 Bacterial transferase hexapeptide (six repeats) ASKIR_1959 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ASKIR_1960 PF07977 FabA-like domain ASKIR_1961 PF02684 Lipid-A-disaccharide synthetase ASKIR_1962 PF02677 Epoxyqueuosine reductase QueH ASKIR_1968 PF01027 Inhibitor of apoptosis-promoting Bax1 ASKIR_1969 PF02581 Thiamine monophosphate synthase ASKIR_1969 PF17792 ThiD2 family ASKIR_1971 PF03840 Preprotein translocase SecG subunit ASKIR_1972 PF01765 Ribosome recycling factor ASKIR_1973 PF00156 Phosphoribosyl transferase domain ASKIR_1976 PF01544 CorA-like Mg2+ transporter protein ASKIR_1977 PF03883 Peroxide stress protein YaaA ASKIR_1981 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ASKIR_1981 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ASKIR_1982 PF03167 Uracil DNA glycosylase superfamily ASKIR_1983 PF00171 Aldehyde dehydrogenase family ASKIR_1984 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASKIR_1984 PF00205 Thiamine pyrophosphate enzyme, central domain ASKIR_1984 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASKIR_1985 PF13419 Haloacid dehalogenase-like hydrolase ASKIR_1986 PF00210 Ferritin-like domain ASKIR_1987 PF07690 Major Facilitator Superfamily ASKIR_1988 PF13426 PAS domain ASKIR_1988 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASKIR_1988 PF00072 Response regulator receiver domain ASKIR_1990 PF00072 Response regulator receiver domain ASKIR_1990 PF00990 Diguanylate cyclase, GGDEF domain ASKIR_1991 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ASKIR_1991 PF00529 HlyD membrane-fusion protein of T1SS ASKIR_1992 PF00873 AcrB/AcrD/AcrF family ASKIR_1993 PF02321 Outer membrane efflux protein ASKIR_1995 PF02203 Tar ligand binding domain homologue ASKIR_1995 PF00672 HAMP domain ASKIR_1995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_1998 PF01053 Cys/Met metabolism PLP-dependent enzyme ASKIR_1999 PF02082 Transcriptional regulator ASKIR_2000 PF00291 Pyridoxal-phosphate dependent enzyme ASKIR_2002 PF01507 Phosphoadenosine phosphosulfate reductase family ASKIR_2004 PF01507 Phosphoadenosine phosphosulfate reductase family ASKIR_2005 PF00009 Elongation factor Tu GTP binding domain ASKIR_2007 PF00291 Pyridoxal-phosphate dependent enzyme ASKIR_2009 PF00266 Aminotransferase class-V ASKIR_2011 PF00149 Calcineurin-like phosphoesterase ASKIR_2012 PF02630 SCO1/SenC ASKIR_2015 PF01814 Hemerythrin HHE cation binding domain ASKIR_2016 PF17850 CysA C-terminal regulatory domain ASKIR_2016 PF12857 TOBE-like domain ASKIR_2016 PF00005 ABC transporter ASKIR_2017 PF00528 Binding-protein-dependent transport system inner membrane component ASKIR_2018 PF00528 Binding-protein-dependent transport system inner membrane component ASKIR_2019 PF00672 HAMP domain ASKIR_2019 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ASKIR_2019 PF02203 Tar ligand binding domain homologue ASKIR_2020 PF10442 FIST C domain ASKIR_2020 PF00990 Diguanylate cyclase, GGDEF domain ASKIR_2020 PF00563 EAL domain ASKIR_2020 PF08495 FIST N domain ASKIR_2021 PF00581 Rhodanese-like domain ASKIR_2021 PF00899 ThiF family ASKIR_2023 PF00011 Hsp20/alpha crystallin family ASKIR_2025 PF03144 Elongation factor Tu domain 2 ASKIR_2025 PF00009 Elongation factor Tu GTP binding domain ASKIR_2025 PF00679 Elongation factor G C-terminus ASKIR_2026 PF04143 Sulphur transport ASKIR_2027 PF01206 Sulfurtransferase TusA ASKIR_2028 PF08019 Phosphoethanolamine transferase EptA/EptB ASKIR_2028 PF00884 Sulfatase ASKIR_2033 PF00072 Response regulator receiver domain ASKIR_2033 PF00486 Transcriptional regulatory protein, C terminal ASKIR_2035 PF00884 Sulfatase ASKIR_2036 PF02511 Thymidylate synthase complementing protein ASKIR_2037 PF03458 UPF0126 domain ASKIR_2039 PF00551 Formyl transferase ASKIR_2040 PF02075 Crossover junction endodeoxyribonuclease RuvC