locus-tag class description Alide_0001 IPR020591 Chromosomal replication control, initiator DnaA-like Alide_0001 IPR013317 Chromosomal replication initiator protein DnaA Alide_0001 IPR001957 Chromosomal replication control, initiator DnaA Alide_0001 IPR003593 AAA+ ATPase domain Alide_0001 IPR013159 Chromosomal replication initiator, DnaA C-terminal Alide_0001 IPR024633 DnaA N-terminal domain Alide_0001 IPR038454 DnaA, N-terminal domain superfamily Alide_0001 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0001 IPR010921 Trp repressor/replication initiator Alide_0001 IPR018312 Chromosomal replication control, initiator DnaA, conserved site Alide_0002 IPR022637 DNA polymerase III, beta sliding clamp, central Alide_0002 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal Alide_0002 IPR001001 DNA polymerase III, beta sliding clamp Alide_0002 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal Alide_0003 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_0003 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_0003 IPR034160 DNA gyrase subunit B, TOPRIM domain Alide_0003 IPR006171 TOPRIM domain Alide_0003 IPR018522 DNA topoisomerase, type IIA, conserved site Alide_0003 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 Alide_0003 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal Alide_0003 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Alide_0003 IPR001241 DNA topoisomerase, type IIA Alide_0003 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Alide_0003 IPR002288 DNA gyrase B subunit, C-terminal Alide_0003 IPR011557 DNA gyrase, subunit B Alide_0003 IPR041423 DNA gyrase subunit B insert domain Alide_0003 IPR003594 Histidine kinase/HSP90-like ATPase Alide_0005 IPR023606 CoA-transferase family III domain superfamily Alide_0005 IPR003673 CoA-transferase family III Alide_0006 IPR001753 Enoyl-CoA hydratase/isomerase Alide_0006 IPR029045 ClpP/crotonase-like domain superfamily Alide_0007 IPR036390 Winged helix DNA-binding domain superfamily Alide_0007 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0007 IPR000847 Transcription regulator HTH, LysR Alide_0007 IPR005119 LysR, substrate-binding Alide_0008 IPR042100 Bordetella uptake gene, domain 1 Alide_0008 IPR005064 Bordetella uptake gene Alide_0010 IPR011761 ATP-grasp fold Alide_0010 IPR001882 Biotin-binding site Alide_0010 IPR011764 Biotin carboxylation domain Alide_0010 IPR011053 Single hybrid motif Alide_0010 IPR011054 Rudiment single hybrid motif Alide_0010 IPR016185 Pre-ATP-grasp domain superfamily Alide_0010 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Alide_0010 IPR000089 Biotin/lipoyl attachment Alide_0010 IPR005482 Biotin carboxylase, C-terminal Alide_0010 IPR005481 Biotin carboxylase-like, N-terminal domain Alide_0011 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0011 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_0011 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0011 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0011 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0011 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0011 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0012 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal Alide_0012 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal Alide_0012 IPR029045 ClpP/crotonase-like domain superfamily Alide_0012 IPR034733 Acetyl-CoA carboxylase Alide_0013 IPR020456 Acylphosphatase Alide_0013 IPR017968 Acylphosphatase, conserved site Alide_0013 IPR036046 Acylphosphatase-like domain superfamily Alide_0013 IPR001792 Acylphosphatase-like domain Alide_0015 IPR036291 NAD(P)-binding domain superfamily Alide_0015 IPR019811 Homoserine dehydrogenase, conserved site Alide_0015 IPR001342 Homoserine dehydrogenase, catalytic Alide_0015 IPR016204 Homoserine dehydrogenase Alide_0015 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding Alide_0015 IPR002912 ACT domain Alide_0016 IPR010614 DEAD2 Alide_0016 IPR006555 ATP-dependent helicase, C-terminal Alide_0016 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0016 IPR001650 Helicase, C-terminal Alide_0016 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type Alide_0016 IPR039000 ATP-dependent DNA helicase DinG Alide_0018 IPR038765 Papain-like cysteine peptidase superfamily Alide_0018 IPR000064 Endopeptidase, NLPC/P60 domain Alide_0019 IPR013785 Aldolase-type TIM barrel Alide_0019 IPR006219 DHAP synthase, class 1 Alide_0019 IPR006218 DAHP synthetase I/KDSA Alide_0020 IPR029787 Nucleotide cyclase Alide_0020 IPR005330 MHYT domain Alide_0020 IPR035919 EAL domain superfamily Alide_0020 IPR001633 EAL domain Alide_0020 IPR000160 GGDEF domain Alide_0022 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_0022 IPR042100 Bordetella uptake gene, domain 1 Alide_0022 IPR005064 Bordetella uptake gene Alide_0023 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0023 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0023 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0023 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0023 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0023 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0024 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0024 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0024 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0024 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0024 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0024 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0025 IPR005064 Bordetella uptake gene Alide_0025 IPR042100 Bordetella uptake gene, domain 1 Alide_0026 IPR011761 ATP-grasp fold Alide_0026 IPR013815 ATP-grasp fold, subdomain 1 Alide_0026 IPR003781 CoA-binding Alide_0026 IPR000182 GNAT domain Alide_0026 IPR036291 NAD(P)-binding domain superfamily Alide_0026 IPR016102 Succinyl-CoA synthetase-like Alide_0026 IPR016181 Acyl-CoA N-acyltransferase Alide_0026 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Alide_0027 IPR029045 ClpP/crotonase-like domain superfamily Alide_0027 IPR001753 Enoyl-CoA hydratase/isomerase Alide_0031 IPR007476 Putative exonuclease, RdgC Alide_0032 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Alide_0035 IPR011789 Cu(I)-responsive transcriptional regulator Alide_0035 IPR009061 Putative DNA-binding domain superfamily Alide_0035 IPR015358 Transcription regulator MerR, DNA binding Alide_0035 IPR000551 MerR-type HTH domain Alide_0037 IPR023298 P-type ATPase, transmembrane domain superfamily Alide_0037 IPR018303 P-type ATPase, phosphorylation site Alide_0037 IPR023299 P-type ATPase, cytoplasmic domain N Alide_0037 IPR036163 Heavy metal-associated domain superfamily Alide_0037 IPR008250 P-type ATPase, A domain superfamily Alide_0037 IPR006121 Heavy metal-associated domain, HMA Alide_0037 IPR036412 HAD-like superfamily Alide_0037 IPR006122 Heavy metal-associated domain, copper ion-binding Alide_0037 IPR017969 Heavy-metal-associated, conserved site Alide_0037 IPR023214 HAD superfamily Alide_0037 IPR027256 P-type ATPase, subfamily IB Alide_0037 IPR001757 P-type ATPase Alide_0038 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Alide_0038 IPR004090 Chemotaxis methyl-accepting receptor Alide_0038 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Alide_0038 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Alide_0038 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Alide_0038 IPR003660 HAMP domain Alide_0039 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA Alide_0039 IPR001036 Acriflavin resistance protein Alide_0039 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Alide_0040 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB Alide_0040 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Alide_0040 IPR006143 RND efflux pump, membrane fusion protein Alide_0042 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0042 IPR001789 Signal transduction response regulator, receiver domain Alide_0042 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_0042 IPR039420 Transcriptional regulatory protein WalR-like Alide_0042 IPR011006 CheY-like superfamily Alide_0043 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_0043 IPR005467 Histidine kinase domain Alide_0043 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_0043 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_0043 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_0043 IPR003594 Histidine kinase/HSP90-like ATPase Alide_0043 IPR003660 HAMP domain Alide_0044 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Alide_0044 IPR013785 Aldolase-type TIM barrel Alide_0045 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Alide_0045 IPR036249 Thioredoxin-like superfamily Alide_0045 IPR004046 Glutathione S-transferase, C-terminal Alide_0045 IPR010987 Glutathione S-transferase, C-terminal-like Alide_0045 IPR004045 Glutathione S-transferase, N-terminal Alide_0046 IPR005358 Putative zinc- or iron-chelating domain containing protein Alide_0047 IPR029039 Flavoprotein-like superfamily Alide_0047 IPR005025 NADPH-dependent FMN reductase-like Alide_0048 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_0048 IPR026904 GidA associated domain 3 Alide_0048 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG Alide_0048 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related Alide_0048 IPR020595 MnmG-related, conserved site Alide_0050 IPR003682 rRNA small subunit methyltransferase G Alide_0050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_0051 IPR001123 Amino acid exporter protein, LeuE-type Alide_0052 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0052 IPR025669 AAA domain Alide_0054 IPR041468 ParB/Spo0J, HTH domain Alide_0054 IPR004437 ParB/RepB/Spo0J partition protein Alide_0054 IPR003115 ParB/Sulfiredoxin Alide_0054 IPR036086 ParB/Sulfiredoxin superfamily Alide_0059 IPR006686 Mechanosensitive ion channel MscS, conserved site Alide_0059 IPR008910 Conserved TM helix Alide_0059 IPR010920 LSM domain superfamily Alide_0059 IPR006685 Mechanosensitive ion channel MscS Alide_0059 IPR011066 Mechanosensitive ion channel MscS, C-terminal Alide_0059 IPR023408 Mechanosensitive ion channel MscS domain superfamily Alide_0059 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 Alide_0061 IPR004490 Glycolate oxidase subunit GlcD Alide_0061 IPR016164 FAD-linked oxidase-like, C-terminal Alide_0061 IPR004113 FAD-linked oxidase, C-terminal Alide_0061 IPR006094 FAD linked oxidase, N-terminal Alide_0061 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Alide_0061 IPR036318 FAD-binding, type PCMH-like superfamily Alide_0061 IPR016166 FAD-binding domain, PCMH-type Alide_0064 IPR006528 Phage head morphogenesis domain Alide_0077 IPR016030 Cobalamin adenosyltransferase-like Alide_0077 IPR036451 Cobalamin adenosyltransferase-like superfamily Alide_0077 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type Alide_0078 IPR029069 HotDog domain superfamily Alide_0078 IPR003736 Phenylacetic acid degradation-related domain Alide_0078 IPR006683 Thioesterase domain Alide_0079 IPR037171 NagB/RpiA transferase-like Alide_0079 IPR017821 Succinate CoA transferase Alide_0079 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily Alide_0079 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain Alide_0079 IPR003702 Acetyl-CoA hydrolase/transferase Alide_0081 IPR005119 LysR, substrate-binding Alide_0081 IPR000847 Transcription regulator HTH, LysR Alide_0081 IPR036390 Winged helix DNA-binding domain superfamily Alide_0081 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0082 IPR042100 Bordetella uptake gene, domain 1 Alide_0082 IPR005064 Bordetella uptake gene Alide_0083 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_0083 IPR036291 NAD(P)-binding domain superfamily Alide_0083 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_0084 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_0084 IPR036291 NAD(P)-binding domain superfamily Alide_0084 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_0084 IPR011283 Acetoacetyl-CoA reductase Alide_0086 IPR006042 Xanthine/uracil permease Alide_0086 IPR019918 Pyrimidine permease RutG, predicted Alide_0086 IPR006043 Xanthine/uracil/vitamin C permease Alide_0088 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase Alide_0088 IPR002938 FAD-binding domain Alide_0088 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_0089 IPR000873 AMP-dependent synthetase/ligase Alide_0089 IPR042099 AMP-dependent synthetase-like superfamily Alide_0089 IPR005914 Acetoacetyl-CoA synthase Alide_0089 IPR020845 AMP-binding, conserved site Alide_0089 IPR025110 AMP-binding enzyme, C-terminal domain Alide_0090 IPR036390 Winged helix DNA-binding domain superfamily Alide_0090 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0090 IPR000847 Transcription regulator HTH, LysR Alide_0090 IPR005119 LysR, substrate-binding Alide_0090 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain Alide_0091 IPR042100 Bordetella uptake gene, domain 1 Alide_0091 IPR005064 Bordetella uptake gene Alide_0092 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0092 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0092 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0092 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0092 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0092 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0093 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0093 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0093 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0093 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0093 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0093 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0094 IPR029045 ClpP/crotonase-like domain superfamily Alide_0094 IPR001753 Enoyl-CoA hydratase/isomerase Alide_0094 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_0094 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_0095 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase Alide_0095 IPR000462 CDP-alcohol phosphatidyltransferase Alide_0096 IPR010917 TonB-dependent receptor, conserved site Alide_0096 IPR012910 TonB-dependent receptor, plug domain Alide_0096 IPR010105 TonB-dependent siderophore receptor Alide_0096 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Alide_0096 IPR010916 TonB box, conserved site Alide_0096 IPR030149 TonB-dependent siderophore receptor FcuA/FatA Alide_0096 IPR000531 TonB-dependent receptor-like, beta-barrel Alide_0096 IPR039423 TonB-dependent receptor-like Alide_0096 IPR037066 TonB-dependent receptor, plug domain superfamily Alide_0099 IPR007874 Septum formation inhibitor MinC, N-terminal Alide_0099 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily Alide_0099 IPR013033 Septum formation inhibitor MinC Alide_0099 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal Alide_0099 IPR005526 Septum formation inhibitor MinC, C-terminal Alide_0099 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily Alide_0100 IPR025501 ATP binding protein MinD Alide_0100 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0100 IPR010223 ATP binding protein MinD, bacterial-type Alide_0100 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Alide_0101 IPR036707 Cell division topological specificity factor MinE superfamily Alide_0101 IPR005527 Cell division topological specificity factor MinE Alide_0102 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0102 IPR000847 Transcription regulator HTH, LysR Alide_0102 IPR005119 LysR, substrate-binding Alide_0102 IPR036390 Winged helix DNA-binding domain superfamily Alide_0103 IPR042100 Bordetella uptake gene, domain 1 Alide_0103 IPR005064 Bordetella uptake gene Alide_0104 IPR023592 D-galactonate dehydratase Alide_0104 IPR034593 Mandelate racemase-like Alide_0104 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Alide_0104 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Alide_0104 IPR036849 Enolase-like, C-terminal domain superfamily Alide_0104 IPR029017 Enolase-like, N-terminal Alide_0104 IPR029065 Enolase C-terminal domain-like Alide_0104 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site Alide_0105 IPR002563 Flavin reductase like domain Alide_0105 IPR036390 Winged helix DNA-binding domain superfamily Alide_0105 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0105 IPR012349 FMN-binding split barrel Alide_0106 IPR019913 Pyrimidine utilisation protein RutD Alide_0106 IPR000073 Alpha/beta hydrolase fold-1 Alide_0106 IPR029058 Alpha/Beta hydrolase fold Alide_0110 IPR005119 LysR, substrate-binding Alide_0110 IPR000847 Transcription regulator HTH, LysR Alide_0110 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0110 IPR036390 Winged helix DNA-binding domain superfamily Alide_0112 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain Alide_0112 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising Alide_0112 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal Alide_0112 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal Alide_0112 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site Alide_0112 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal Alide_0114 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Alide_0114 IPR001926 Pyridoxal-phosphate dependent enzyme Alide_0114 IPR002912 ACT domain Alide_0114 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Alide_0114 IPR005789 Threonine dehydratase, catabolic Alide_0115 IPR041504 Adaptive response protein AidB, N-terminal Alide_0115 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_0115 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0115 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0115 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0115 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0115 IPR034184 Putative acyl-CoA dehydrogenase AidB Alide_0116 IPR004014 Cation-transporting P-type ATPase, N-terminal Alide_0116 IPR023214 HAD superfamily Alide_0116 IPR018303 P-type ATPase, phosphorylation site Alide_0116 IPR006415 P-type ATPase, subfamily IIIB Alide_0116 IPR001757 P-type ATPase Alide_0116 IPR023299 P-type ATPase, cytoplasmic domain N Alide_0116 IPR023298 P-type ATPase, transmembrane domain superfamily Alide_0116 IPR006068 Cation-transporting P-type ATPase, C-terminal Alide_0116 IPR008250 P-type ATPase, A domain superfamily Alide_0116 IPR036412 HAD-like superfamily Alide_0117 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily Alide_0117 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Alide_0117 IPR000489 Pterin-binding domain Alide_0117 IPR036594 Methionine synthase domain Alide_0117 IPR006158 Cobalamin (vitamin B12)-binding domain Alide_0117 IPR033706 Methionine synthase, B12-binding domain Alide_0117 IPR036589 Homocysteine-binding domain superfamily Alide_0117 IPR003726 Homocysteine-binding domain Alide_0117 IPR011005 Dihydropteroate synthase-like Alide_0117 IPR036724 Cobalamin-binding domain superfamily Alide_0117 IPR011822 Cobalamin-dependent methionine synthase Alide_0117 IPR004223 Vitamin B12-dependent methionine synthase, activation domain Alide_0118 IPR036390 Winged helix DNA-binding domain superfamily Alide_0118 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0118 IPR000847 Transcription regulator HTH, LysR Alide_0118 IPR005119 LysR, substrate-binding Alide_0118 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain Alide_0119 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0119 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0119 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0119 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0119 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0119 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0121 IPR005064 Bordetella uptake gene Alide_0121 IPR042100 Bordetella uptake gene, domain 1 Alide_0122 IPR004589 DNA helicase, ATP-dependent, RecQ type Alide_0122 IPR011545 DEAD/DEAH box helicase domain Alide_0122 IPR001650 Helicase, C-terminal Alide_0122 IPR010997 HRDC-like superfamily Alide_0122 IPR002121 HRDC domain Alide_0122 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0122 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Alide_0122 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial Alide_0122 IPR014001 Helicase superfamily 1/2, ATP-binding domain Alide_0122 IPR018982 RQC domain Alide_0122 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0126 IPR005330 MHYT domain Alide_0126 IPR000160 GGDEF domain Alide_0126 IPR035919 EAL domain superfamily Alide_0126 IPR001633 EAL domain Alide_0126 IPR029787 Nucleotide cyclase Alide_0128 IPR000883 Cytochrome c oxidase subunit I Alide_0128 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site Alide_0128 IPR036927 Cytochrome c oxidase-like, subunit I superfamily Alide_0128 IPR023616 Cytochrome c oxidase-like, subunit I domain Alide_0129 IPR002078 RNA polymerase sigma factor 54 interaction domain Alide_0129 IPR025944 Sigma-54 interaction domain, conserved site Alide_0129 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Alide_0129 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Alide_0129 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0129 IPR002197 DNA binding HTH domain, Fis-type Alide_0129 IPR029016 GAF-like domain superfamily Alide_0129 IPR003018 GAF domain Alide_0129 IPR003593 AAA+ ATPase domain Alide_0129 IPR009057 Homeobox-like domain superfamily Alide_0131 IPR005131 Serine dehydratase beta chain Alide_0131 IPR005130 Serine dehydratase-like, alpha subunit Alide_0131 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form Alide_0131 IPR029009 Allosteric substrate binding domain superfamily Alide_0132 IPR042100 Bordetella uptake gene, domain 1 Alide_0132 IPR005064 Bordetella uptake gene Alide_0133 IPR000873 AMP-dependent synthetase/ligase Alide_0133 IPR020845 AMP-binding, conserved site Alide_0133 IPR020459 AMP-binding Alide_0133 IPR025110 AMP-binding enzyme, C-terminal domain Alide_0133 IPR042099 AMP-dependent synthetase-like superfamily Alide_0134 IPR005064 Bordetella uptake gene Alide_0134 IPR042100 Bordetella uptake gene, domain 1 Alide_0136 IPR005064 Bordetella uptake gene Alide_0136 IPR042100 Bordetella uptake gene, domain 1 Alide_0137 IPR005064 Bordetella uptake gene Alide_0137 IPR042100 Bordetella uptake gene, domain 1 Alide_0139 IPR000873 AMP-dependent synthetase/ligase Alide_0139 IPR020845 AMP-binding, conserved site Alide_0139 IPR025110 AMP-binding enzyme, C-terminal domain Alide_0139 IPR042099 AMP-dependent synthetase-like superfamily Alide_0141 IPR036291 NAD(P)-binding domain superfamily Alide_0141 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_0141 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_0142 IPR042100 Bordetella uptake gene, domain 1 Alide_0142 IPR005064 Bordetella uptake gene Alide_0143 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_0143 IPR036291 NAD(P)-binding domain superfamily Alide_0145 IPR036390 Winged helix DNA-binding domain superfamily Alide_0145 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0145 IPR005471 Transcription regulator IclR, N-terminal Alide_0145 IPR014757 Transcription regulator IclR, C-terminal Alide_0145 IPR029016 GAF-like domain superfamily Alide_0149 IPR020616 Thiolase, N-terminal Alide_0149 IPR020613 Thiolase, conserved site Alide_0149 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_0149 IPR020610 Thiolase, active site Alide_0149 IPR016039 Thiolase-like Alide_0149 IPR002155 Thiolase Alide_0149 IPR012805 Acetyl-CoA C-acyltransferase FadA Alide_0149 IPR020617 Thiolase, C-terminal Alide_0150 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_0150 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0150 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0150 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0150 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0150 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0150 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0151 IPR025110 AMP-binding enzyme, C-terminal domain Alide_0151 IPR020845 AMP-binding, conserved site Alide_0151 IPR000873 AMP-dependent synthetase/ligase Alide_0151 IPR042099 AMP-dependent synthetase-like superfamily Alide_0153 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_0153 IPR036291 NAD(P)-binding domain superfamily Alide_0153 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_0154 IPR005064 Bordetella uptake gene Alide_0154 IPR042100 Bordetella uptake gene, domain 1 Alide_0161 IPR003673 CoA-transferase family III Alide_0161 IPR023606 CoA-transferase family III domain superfamily Alide_0162 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0162 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0162 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0162 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0162 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0162 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_0162 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0163 IPR029069 HotDog domain superfamily Alide_0164 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_0164 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_0164 IPR036291 NAD(P)-binding domain superfamily Alide_0165 IPR039569 N-terminal of MaoC-like dehydratase Alide_0165 IPR029069 HotDog domain superfamily Alide_0165 IPR016709 Uncharacterised protein family UPF0336 Alide_0166 IPR029045 ClpP/crotonase-like domain superfamily Alide_0166 IPR001753 Enoyl-CoA hydratase/isomerase Alide_0166 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_0166 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB Alide_0167 IPR003702 Acetyl-CoA hydrolase/transferase Alide_0167 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain Alide_0167 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily Alide_0167 IPR037171 NagB/RpiA transferase-like Alide_0168 IPR002155 Thiolase Alide_0168 IPR020616 Thiolase, N-terminal Alide_0168 IPR020613 Thiolase, conserved site Alide_0168 IPR020617 Thiolase, C-terminal Alide_0168 IPR020610 Thiolase, active site Alide_0168 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_0168 IPR016039 Thiolase-like Alide_0170 IPR023606 CoA-transferase family III domain superfamily Alide_0170 IPR003673 CoA-transferase family III Alide_0171 IPR013149 Alcohol dehydrogenase, C-terminal Alide_0171 IPR013154 Alcohol dehydrogenase, N-terminal Alide_0171 IPR020843 Polyketide synthase, enoylreductase domain Alide_0171 IPR036291 NAD(P)-binding domain superfamily Alide_0171 IPR011032 GroES-like superfamily Alide_0172 IPR005064 Bordetella uptake gene Alide_0172 IPR042100 Bordetella uptake gene, domain 1 Alide_0173 IPR036390 Winged helix DNA-binding domain superfamily Alide_0173 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0173 IPR000847 Transcription regulator HTH, LysR Alide_0173 IPR005119 LysR, substrate-binding Alide_0174 IPR042100 Bordetella uptake gene, domain 1 Alide_0174 IPR005064 Bordetella uptake gene Alide_0175 IPR011650 Peptidase M20, dimerisation domain Alide_0175 IPR002933 Peptidase M20 Alide_0175 IPR036264 Bacterial exopeptidase dimerisation domain Alide_0175 IPR017439 Amidohydrolase Alide_0176 IPR042100 Bordetella uptake gene, domain 1 Alide_0176 IPR005064 Bordetella uptake gene Alide_0177 IPR020845 AMP-binding, conserved site Alide_0177 IPR000873 AMP-dependent synthetase/ligase Alide_0177 IPR025110 AMP-binding enzyme, C-terminal domain Alide_0178 IPR005064 Bordetella uptake gene Alide_0178 IPR042100 Bordetella uptake gene, domain 1 Alide_0179 IPR005064 Bordetella uptake gene Alide_0179 IPR042100 Bordetella uptake gene, domain 1 Alide_0180 IPR011650 Peptidase M20, dimerisation domain Alide_0180 IPR036264 Bacterial exopeptidase dimerisation domain Alide_0180 IPR017439 Amidohydrolase Alide_0180 IPR002933 Peptidase M20 Alide_0183 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0183 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_0183 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0183 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0183 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0183 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0183 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0186 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_0186 IPR005064 Bordetella uptake gene Alide_0186 IPR042100 Bordetella uptake gene, domain 1 Alide_0187 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Alide_0187 IPR036291 NAD(P)-binding domain superfamily Alide_0187 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_0187 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_0188 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0188 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0188 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0188 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0188 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_0188 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0188 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0189 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal Alide_0189 IPR034733 Acetyl-CoA carboxylase Alide_0189 IPR029045 ClpP/crotonase-like domain superfamily Alide_0189 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal Alide_0190 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0190 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0190 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0190 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0190 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0190 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_0190 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0191 IPR029045 ClpP/crotonase-like domain superfamily Alide_0191 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_0191 IPR001753 Enoyl-CoA hydratase/isomerase Alide_0191 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_0192 IPR001882 Biotin-binding site Alide_0192 IPR005481 Biotin carboxylase-like, N-terminal domain Alide_0192 IPR011053 Single hybrid motif Alide_0192 IPR011761 ATP-grasp fold Alide_0192 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Alide_0192 IPR011054 Rudiment single hybrid motif Alide_0192 IPR000089 Biotin/lipoyl attachment Alide_0192 IPR005482 Biotin carboxylase, C-terminal Alide_0192 IPR011764 Biotin carboxylation domain Alide_0192 IPR016185 Pre-ATP-grasp domain superfamily Alide_0194 IPR042100 Bordetella uptake gene, domain 1 Alide_0194 IPR005064 Bordetella uptake gene Alide_0195 IPR003673 CoA-transferase family III Alide_0195 IPR023606 CoA-transferase family III domain superfamily Alide_0197 IPR023606 CoA-transferase family III domain superfamily Alide_0197 IPR003673 CoA-transferase family III Alide_0198 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0198 IPR000847 Transcription regulator HTH, LysR Alide_0198 IPR005119 LysR, substrate-binding Alide_0198 IPR036390 Winged helix DNA-binding domain superfamily Alide_0199 IPR005064 Bordetella uptake gene Alide_0199 IPR042100 Bordetella uptake gene, domain 1 Alide_0200 IPR003673 CoA-transferase family III Alide_0200 IPR023606 CoA-transferase family III domain superfamily Alide_0201 IPR033922 NAD(P) binding domain of glutamate dehydrogenase Alide_0201 IPR036291 NAD(P)-binding domain superfamily Alide_0201 IPR014362 Glutamate dehydrogenase Alide_0201 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain Alide_0201 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal Alide_0201 IPR033524 Leu/Phe/Val dehydrogenases active site Alide_0201 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase Alide_0204 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily Alide_0204 IPR003726 Homocysteine-binding domain Alide_0204 IPR004223 Vitamin B12-dependent methionine synthase, activation domain Alide_0204 IPR011005 Dihydropteroate synthase-like Alide_0204 IPR000489 Pterin-binding domain Alide_0204 IPR036589 Homocysteine-binding domain superfamily Alide_0204 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Alide_0204 IPR006158 Cobalamin (vitamin B12)-binding domain Alide_0204 IPR036724 Cobalamin-binding domain superfamily Alide_0204 IPR011822 Cobalamin-dependent methionine synthase Alide_0204 IPR036594 Methionine synthase domain Alide_0204 IPR033706 Methionine synthase, B12-binding domain Alide_0205 IPR028629 CRISPR-associated endonuclease Cas9 Alide_0205 IPR041383 RuvC endonuclease subdomain 3 Alide_0205 IPR003615 HNH nuclease Alide_0205 IPR033114 Cas9-type HNH domain Alide_0205 IPR040619 Cas9, alpha-helical lobe domain Alide_0207 IPR021127 CRISPR-associated endonuclease Cas2 Alide_0207 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Alide_0209 IPR042217 Type IV secretion system, VirB10/TrbI Alide_0209 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Alide_0210 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily Alide_0210 IPR033645 VirB9/CagX/TrbG, C-terminal Alide_0210 IPR014142 P-type conjugative transfer protein TrbG Alide_0210 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Alide_0212 IPR014150 Conjugal transfer, TrbL Alide_0212 IPR007688 Plasmid conjugal transfer TrbL/VirB6 Alide_0214 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0214 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain Alide_0214 IPR004346 CagE, TrbE, VirB component of type IV transporter system Alide_0214 IPR003593 AAA+ ATPase domain Alide_0216 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 Alide_0217 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0217 IPR014149 Conjugative transfer, TrbB Alide_0217 IPR001482 Type II/IV secretion system protein Alide_0219 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0219 IPR003688 Type IV secretion system protein TraG/VirD4 Alide_0221 IPR005119 LysR, substrate-binding Alide_0221 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0221 IPR000847 Transcription regulator HTH, LysR Alide_0221 IPR036390 Winged helix DNA-binding domain superfamily Alide_0221 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain Alide_0222 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Alide_0222 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA Alide_0222 IPR001036 Acriflavin resistance protein Alide_0223 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Alide_0223 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB Alide_0223 IPR006143 RND efflux pump, membrane fusion protein Alide_0224 IPR003423 Outer membrane efflux protein Alide_0227 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_0227 IPR001789 Signal transduction response regulator, receiver domain Alide_0227 IPR039420 Transcriptional regulatory protein WalR-like Alide_0227 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0227 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response Alide_0227 IPR011006 CheY-like superfamily Alide_0228 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_0228 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_0228 IPR005467 Histidine kinase domain Alide_0228 IPR003660 HAMP domain Alide_0228 IPR003594 Histidine kinase/HSP90-like ATPase Alide_0228 IPR006290 Heavy metal sensor kinase Alide_0228 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_0228 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_0231 IPR036163 Heavy metal-associated domain superfamily Alide_0231 IPR023299 P-type ATPase, cytoplasmic domain N Alide_0231 IPR018303 P-type ATPase, phosphorylation site Alide_0231 IPR023298 P-type ATPase, transmembrane domain superfamily Alide_0231 IPR036412 HAD-like superfamily Alide_0231 IPR001757 P-type ATPase Alide_0231 IPR027256 P-type ATPase, subfamily IB Alide_0231 IPR023214 HAD superfamily Alide_0231 IPR008250 P-type ATPase, A domain superfamily Alide_0231 IPR017969 Heavy-metal-associated, conserved site Alide_0231 IPR006121 Heavy metal-associated domain, HMA Alide_0232 IPR000551 MerR-type HTH domain Alide_0232 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator Alide_0232 IPR009061 Putative DNA-binding domain superfamily Alide_0235 IPR036286 LexA/Signal peptidase-like superfamily Alide_0235 IPR019533 Peptidase S26 Alide_0235 IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF Alide_0238 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0238 IPR025669 AAA domain Alide_0243 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Alide_0243 IPR001387 Cro/C1-type helix-turn-helix domain Alide_0244 IPR007948 Protein of unknown function DUF736 Alide_0248 IPR003115 ParB/Sulfiredoxin Alide_0248 IPR036086 ParB/Sulfiredoxin superfamily Alide_0248 IPR004437 ParB/RepB/Spo0J partition protein Alide_0249 IPR026325 Protein of unknown function DUF932 Alide_0254 IPR014056 Addiction module killer protein, predicted Alide_0254 IPR009241 Toxin HigB-like Alide_0256 IPR000623 Shikimate kinase/Threonine synthase-like 1 Alide_0256 IPR023000 Shikimate kinase, conserved site Alide_0256 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0256 IPR031322 Shikimate kinase/gluconokinase Alide_0259 IPR017938 Riboflavin synthase-like beta-barrel Alide_0259 IPR001433 Oxidoreductase FAD/NAD(P)-binding Alide_0259 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Alide_0259 IPR033892 Ferredoxin--NADP reductase, bacteria Alide_0259 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Alide_0259 IPR017927 FAD-binding domain, ferredoxin reductase-type Alide_0259 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Alide_0260 IPR000709 Leu/Ile/Val-binding protein Alide_0260 IPR028082 Periplasmic binding protein-like I Alide_0260 IPR028081 Leucine-binding protein domain Alide_0261 IPR001851 ABC transporter, permease Alide_0262 IPR003439 ABC transporter-like Alide_0262 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0262 IPR017871 ABC transporter, conserved site Alide_0262 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_0262 IPR003593 AAA+ ATPase domain Alide_0266 IPR004482 Mg chelatase-related protein Alide_0266 IPR025158 Mg chelatase-related protein, C-terminal domain Alide_0266 IPR000523 Magnesium chelatase ChlI domain Alide_0266 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_0266 IPR003593 AAA+ ATPase domain Alide_0266 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Alide_0266 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0268 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Alide_0268 IPR002332 Nitrogen regulatory protein P-II, urydylation site Alide_0268 IPR002187 Nitrogen regulatory protein PII Alide_0268 IPR017918 Nitrogen regulatory protein PII, conserved site Alide_0268 IPR011322 Nitrogen regulatory PII-like, alpha/beta Alide_0269 IPR029020 Ammonium/urea transporter Alide_0269 IPR018047 Ammonium transporter, conserved site Alide_0269 IPR001905 Ammonium transporter Alide_0269 IPR024041 Ammonium transporter AmtB-like domain Alide_0270 IPR036390 Winged helix DNA-binding domain superfamily Alide_0270 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0270 IPR000847 Transcription regulator HTH, LysR Alide_0270 IPR005119 LysR, substrate-binding Alide_0271 IPR015815 3-hydroxyisobutyrate dehydrogenase-related Alide_0271 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_0271 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site Alide_0271 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Alide_0271 IPR006398 2-hydroxy-3-oxopropionate reductase Alide_0271 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Alide_0271 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Alide_0271 IPR036291 NAD(P)-binding domain superfamily Alide_0272 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_0272 IPR016161 Aldehyde/histidinol dehydrogenase Alide_0272 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_0272 IPR015590 Aldehyde dehydrogenase domain Alide_0273 IPR005064 Bordetella uptake gene Alide_0273 IPR042100 Bordetella uptake gene, domain 1 Alide_0277 IPR000073 Alpha/beta hydrolase fold-1 Alide_0277 IPR029058 Alpha/Beta hydrolase fold Alide_0279 IPR017516 AbrB duplication Alide_0279 IPR007820 AbrB family Alide_0280 IPR042183 MmgE/PrpD superfamily, domain 1 Alide_0280 IPR042188 MmgE/PrpD superfamily, domain 2 Alide_0280 IPR005656 MmgE/PrpD Alide_0280 IPR036148 MmgE/PrpD superfamily Alide_0281 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0281 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0281 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0281 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0281 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0281 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0281 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_0282 IPR042100 Bordetella uptake gene, domain 1 Alide_0282 IPR005064 Bordetella uptake gene Alide_0283 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Alide_0283 IPR016102 Succinyl-CoA synthetase-like Alide_0283 IPR000182 GNAT domain Alide_0283 IPR036291 NAD(P)-binding domain superfamily Alide_0283 IPR016181 Acyl-CoA N-acyltransferase Alide_0283 IPR013815 ATP-grasp fold, subdomain 1 Alide_0283 IPR003781 CoA-binding Alide_0283 IPR011761 ATP-grasp fold Alide_0284 IPR016166 FAD-binding domain, PCMH-type Alide_0284 IPR036318 FAD-binding, type PCMH-like superfamily Alide_0284 IPR006094 FAD linked oxidase, N-terminal Alide_0284 IPR016164 FAD-linked oxidase-like, C-terminal Alide_0284 IPR016169 FAD-binding, type PCMH, subdomain 2 Alide_0286 IPR012257 Glycolate oxidase, iron-sulphur subunit Alide_0286 IPR004017 Cysteine-rich domain Alide_0286 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Alide_0286 IPR009051 Alpha-helical ferredoxin Alide_0286 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_0289 IPR023727 Lysophospholipid transporter LplT Alide_0289 IPR011701 Major facilitator superfamily Alide_0289 IPR036259 MFS transporter superfamily Alide_0290 IPR000821 Alanine racemase Alide_0290 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site Alide_0290 IPR001608 Alanine racemase, N-terminal Alide_0290 IPR011079 Alanine racemase, C-terminal Alide_0290 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Alide_0290 IPR029066 PLP-binding barrel Alide_0291 IPR036909 Cytochrome c-like domain superfamily Alide_0291 IPR009056 Cytochrome c-like domain Alide_0291 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase Alide_0291 IPR004852 Di-haem cytochrome c peroxidase Alide_0292 IPR005955 Glutathione S-transferases, class Zeta Alide_0292 IPR036249 Thioredoxin-like superfamily Alide_0292 IPR004045 Glutathione S-transferase, N-terminal Alide_0292 IPR040079 Glutathione Transferase family Alide_0292 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Alide_0292 IPR010987 Glutathione S-transferase, C-terminal-like Alide_0292 IPR004046 Glutathione S-transferase, C-terminal Alide_0292 IPR034333 Glutathione S-transferases, class Zeta , N-terminal Alide_0292 IPR034330 Glutathione S-transferases, class Zeta , C-terminal Alide_0293 IPR041166 LapB, rubredoxin metal binding domain Alide_0293 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Alide_0293 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain Alide_0293 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_0293 IPR004504 DNA repair protein RadA Alide_0293 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0293 IPR003593 AAA+ ATPase domain Alide_0295 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit Alide_0295 IPR020556 Amidase, conserved site Alide_0295 IPR023631 Amidase signature domain Alide_0295 IPR000120 Amidase Alide_0295 IPR036928 Amidase signature (AS) superfamily Alide_0297 IPR036038 Aminotransferase-like, PLP-dependent enzymes Alide_0297 IPR018300 Aminotransferase, class IV, conserved site Alide_0297 IPR001544 Aminotransferase class IV Alide_0297 IPR033939 Branched-chain aminotransferase Alide_0297 IPR005785 Branched-chain amino acid aminotransferase I Alide_0301 IPR029044 Nucleotide-diphospho-sugar transferases Alide_0301 IPR001173 Glycosyltransferase 2-like Alide_0303 IPR013785 Aldolase-type TIM barrel Alide_0303 IPR004136 Nitronate monooxygenase Alide_0304 IPR036390 Winged helix DNA-binding domain superfamily Alide_0304 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0304 IPR000847 Transcription regulator HTH, LysR Alide_0304 IPR005119 LysR, substrate-binding Alide_0305 IPR036259 MFS transporter superfamily Alide_0305 IPR010645 Uncharacterised MFS-type transporter YbfB Alide_0306 IPR005163 3-alpha domain Alide_0306 IPR005302 Molybdenum cofactor sulfurase, C-terminal Alide_0306 IPR011037 Pyruvate kinase-like, insert domain superfamily Alide_0310 IPR005064 Bordetella uptake gene Alide_0310 IPR042100 Bordetella uptake gene, domain 1 Alide_0311 IPR036390 Winged helix DNA-binding domain superfamily Alide_0311 IPR005119 LysR, substrate-binding Alide_0311 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0311 IPR000847 Transcription regulator HTH, LysR Alide_0312 IPR003673 CoA-transferase family III Alide_0312 IPR023606 CoA-transferase family III domain superfamily Alide_0312 IPR017659 Formyl-CoA:oxalate CoA-transferase Alide_0313 IPR005467 Histidine kinase domain Alide_0313 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_0313 IPR003594 Histidine kinase/HSP90-like ATPase Alide_0313 IPR003660 HAMP domain Alide_0313 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_0313 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_0313 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_0314 IPR039420 Transcriptional regulatory protein WalR-like Alide_0314 IPR001789 Signal transduction response regulator, receiver domain Alide_0314 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_0314 IPR011006 CheY-like superfamily Alide_0314 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0315 IPR011701 Major facilitator superfamily Alide_0315 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 Alide_0315 IPR020846 Major facilitator superfamily domain Alide_0315 IPR036259 MFS transporter superfamily Alide_0318 IPR001915 Peptidase M48 Alide_0318 IPR022919 Peptidase M48, protease HtpX, putative Alide_0322 IPR002078 RNA polymerase sigma factor 54 interaction domain Alide_0322 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Alide_0322 IPR003593 AAA+ ATPase domain Alide_0322 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily Alide_0322 IPR009057 Homeobox-like domain superfamily Alide_0322 IPR010523 Activator of aromatic catabolism Alide_0322 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0322 IPR025944 Sigma-54 interaction domain, conserved site Alide_0322 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Alide_0322 IPR004096 4-vinyl reductase, 4VR Alide_0322 IPR002197 DNA binding HTH domain, Fis-type Alide_0323 IPR010353 Phenol hydroxylase subunit Alide_0324 IPR012078 Methane/phenol monooxygenase, hydroxylase component Alide_0324 IPR003430 Methane/phenol/toluene hydroxylase Alide_0324 IPR009078 Ferritin-like superfamily Alide_0324 IPR012348 Ribonucleotide reductase-like Alide_0325 IPR036889 Monooxygenase component MmoB/DmpM superfamily Alide_0325 IPR003454 Monooxygenase component MmoB/DmpM Alide_0326 IPR012348 Ribonucleotide reductase-like Alide_0326 IPR003430 Methane/phenol/toluene hydroxylase Alide_0326 IPR007029 YHS domain Alide_0326 IPR009078 Ferritin-like superfamily Alide_0327 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_0327 IPR002938 FAD-binding domain Alide_0328 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Alide_0328 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Alide_0328 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Alide_0328 IPR012675 Beta-grasp domain superfamily Alide_0328 IPR017938 Riboflavin synthase-like beta-barrel Alide_0328 IPR017927 FAD-binding domain, ferredoxin reductase-type Alide_0328 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Alide_0328 IPR001433 Oxidoreductase FAD/NAD(P)-binding Alide_0328 IPR036010 2Fe-2S ferredoxin-like superfamily Alide_0329 IPR036010 2Fe-2S ferredoxin-like superfamily Alide_0329 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Alide_0329 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Alide_0329 IPR012675 Beta-grasp domain superfamily Alide_0330 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Alide_0330 IPR037523 Vicinal oxygen chelate (VOC) domain Alide_0330 IPR017624 Catechol 2,3 dioxygenase Alide_0330 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II Alide_0330 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Alide_0331 IPR038084 GlcG-like domain superfamily Alide_0331 IPR005624 Haem-degrading Alide_0335 IPR015590 Aldehyde dehydrogenase domain Alide_0335 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase Alide_0335 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_0335 IPR016161 Aldehyde/histidinol dehydrogenase Alide_0335 IPR016160 Aldehyde dehydrogenase, cysteine active site Alide_0335 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Alide_0335 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_0336 IPR000639 Epoxide hydrolase-like Alide_0336 IPR000073 Alpha/beta hydrolase fold-1 Alide_0336 IPR029058 Alpha/Beta hydrolase fold Alide_0337 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily Alide_0338 IPR036291 NAD(P)-binding domain superfamily Alide_0338 IPR003361 Acetaldehyde dehydrogenase Alide_0338 IPR000534 Semialdehyde dehydrogenase, NAD-binding Alide_0338 IPR015426 Acetaldehyde dehydrogenase, C-terminal Alide_0339 IPR000891 Pyruvate carboxyltransferase Alide_0339 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain Alide_0339 IPR012425 DmpG-like communication Alide_0339 IPR013785 Aldolase-type TIM barrel Alide_0339 IPR017629 4-hydroxy-2-oxovalerate aldolase Alide_0340 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily Alide_0340 IPR017630 4-oxalocrotonate decarboxylase Alide_0341 IPR005064 Bordetella uptake gene Alide_0341 IPR042100 Bordetella uptake gene, domain 1 Alide_0342 IPR014347 Tautomerase/MIF superfamily Alide_0342 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type Alide_0342 IPR004370 4-oxalocrotonate tautomerase Alide_0343 IPR001279 Metallo-beta-lactamase Alide_0343 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Alide_0344 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0344 IPR005471 Transcription regulator IclR, N-terminal Alide_0344 IPR029016 GAF-like domain superfamily Alide_0344 IPR036390 Winged helix DNA-binding domain superfamily Alide_0344 IPR014757 Transcription regulator IclR, C-terminal Alide_0345 IPR005064 Bordetella uptake gene Alide_0345 IPR042100 Bordetella uptake gene, domain 1 Alide_0346 IPR032466 Metal-dependent hydrolase Alide_0346 IPR006680 Amidohydrolase-related Alide_0347 IPR042100 Bordetella uptake gene, domain 1 Alide_0347 IPR005064 Bordetella uptake gene Alide_0348 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Alide_0348 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Alide_0349 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Alide_0349 IPR036291 NAD(P)-binding domain superfamily Alide_0349 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Alide_0349 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Alide_0350 IPR042100 Bordetella uptake gene, domain 1 Alide_0350 IPR005064 Bordetella uptake gene Alide_0351 IPR042100 Bordetella uptake gene, domain 1 Alide_0351 IPR005064 Bordetella uptake gene Alide_0352 IPR032466 Metal-dependent hydrolase Alide_0352 IPR006680 Amidohydrolase-related Alide_0353 IPR013658 SMP-30/Gluconolactonase/LRE-like region Alide_0353 IPR011042 Six-bladed beta-propeller, TolB-like Alide_0354 IPR042100 Bordetella uptake gene, domain 1 Alide_0354 IPR005064 Bordetella uptake gene Alide_0355 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Alide_0355 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site Alide_0355 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Alide_0355 IPR036291 NAD(P)-binding domain superfamily Alide_0355 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_0355 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Alide_0355 IPR015815 3-hydroxyisobutyrate dehydrogenase-related Alide_0356 IPR016161 Aldehyde/histidinol dehydrogenase Alide_0356 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_0356 IPR011264 Betaine aldehyde dehydrogenase Alide_0356 IPR016160 Aldehyde dehydrogenase, cysteine active site Alide_0356 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Alide_0356 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_0356 IPR015590 Aldehyde dehydrogenase domain Alide_0357 IPR029016 GAF-like domain superfamily Alide_0357 IPR014757 Transcription regulator IclR, C-terminal Alide_0357 IPR005471 Transcription regulator IclR, N-terminal Alide_0357 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0357 IPR036390 Winged helix DNA-binding domain superfamily Alide_0361 IPR001851 ABC transporter, permease Alide_0363 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Alide_0363 IPR017871 ABC transporter, conserved site Alide_0363 IPR003439 ABC transporter-like Alide_0363 IPR003593 AAA+ ATPase domain Alide_0363 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0364 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0364 IPR017871 ABC transporter, conserved site Alide_0364 IPR003439 ABC transporter-like Alide_0364 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_0364 IPR003593 AAA+ ATPase domain Alide_0366 IPR008920 Transcription regulator FadR/GntR, C-terminal Alide_0366 IPR000524 Transcription regulator HTH, GntR Alide_0366 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0366 IPR036390 Winged helix DNA-binding domain superfamily Alide_0366 IPR011711 GntR, C-terminal Alide_0367 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_0367 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0367 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0367 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0367 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0367 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0367 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0368 IPR036291 NAD(P)-binding domain superfamily Alide_0368 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_0368 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_0369 IPR011009 Protein kinase-like domain superfamily Alide_0369 IPR002575 Aminoglycoside phosphotransferase Alide_0369 IPR041726 Acyl-CoA dehydrogenase family member 10/11, N-terminal Alide_0370 IPR020848 AP endonuclease 1, conserved site Alide_0370 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Alide_0370 IPR005135 Endonuclease/exonuclease/phosphatase Alide_0370 IPR004808 AP endonuclease 1 Alide_0370 IPR020847 AP endonuclease 1, binding site Alide_0371 IPR000836 Phosphoribosyltransferase domain Alide_0371 IPR023031 Orotate phosphoribosyltransferase Alide_0371 IPR004467 Orotate phosphoribosyl transferase domain Alide_0371 IPR029057 Phosphoribosyltransferase-like Alide_0373 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic Alide_0373 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E Alide_0373 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit Alide_0373 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site Alide_0373 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 Alide_0373 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Alide_0373 IPR018027 Asn/Gln amidotransferase Alide_0373 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 Alide_0373 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like Alide_0374 IPR036928 Amidase signature (AS) superfamily Alide_0374 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit Alide_0374 IPR020556 Amidase, conserved site Alide_0374 IPR000120 Amidase Alide_0374 IPR023631 Amidase signature domain Alide_0375 IPR003837 Glu-tRNAGln amidotransferase C subunit Alide_0375 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C Alide_0376 IPR004753 Cell shape determining protein MreB Alide_0378 IPR007227 Cell shape-determining protein MreD Alide_0378 IPR026034 Cell shape-determining protein MreD, proteobacterial type Alide_0379 IPR001460 Penicillin-binding protein, transpeptidase Alide_0379 IPR036138 Penicillin-binding protein, dimerisation domain superfamily Alide_0379 IPR012338 Beta-lactamase/transpeptidase-like Alide_0379 IPR017790 Penicillin-binding protein 2 Alide_0379 IPR005311 Penicillin-binding protein, dimerisation domain Alide_0380 IPR023696 Ureohydrolase domain superfamily Alide_0380 IPR020855 Ureohydrolase, manganese-binding site Alide_0380 IPR006035 Ureohydrolase Alide_0380 IPR014033 Arginase Alide_0381 IPR002781 Transmembrane protein TauE-like Alide_0382 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_0382 IPR027424 Glucose Oxidase, domain 2 Alide_0382 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Alide_0382 IPR012132 Glucose-methanol-choline oxidoreductase Alide_0382 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Alide_0383 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Alide_0383 IPR030802 ABC transporter permease MalE Alide_0384 IPR003439 ABC transporter-like Alide_0384 IPR017871 ABC transporter, conserved site Alide_0384 IPR003593 AAA+ ATPase domain Alide_0384 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0384 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl Alide_0385 IPR003399 Mce/MlaD Alide_0388 IPR000847 Transcription regulator HTH, LysR Alide_0388 IPR036390 Winged helix DNA-binding domain superfamily Alide_0388 IPR005119 LysR, substrate-binding Alide_0388 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0389 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain Alide_0389 IPR036008 Aconitase, iron-sulfur domain Alide_0389 IPR018136 Aconitase family, 4Fe-4S cluster binding site Alide_0389 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Alide_0389 IPR004430 3-isopropylmalate dehydratase, large subunit Alide_0389 IPR033941 3-Isopropylmalate dehydratase, catalytic domain Alide_0390 IPR042100 Bordetella uptake gene, domain 1 Alide_0390 IPR005064 Bordetella uptake gene Alide_0391 IPR010203 Regulator of ribonuclease activity A Alide_0391 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Alide_0391 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Alide_0392 IPR002771 Multiple antibiotic resistance (MarC)-related Alide_0393 IPR002925 Dienelactone hydrolase Alide_0393 IPR029058 Alpha/Beta hydrolase fold Alide_0394 IPR036259 MFS transporter superfamily Alide_0394 IPR020846 Major facilitator superfamily domain Alide_0394 IPR011701 Major facilitator superfamily Alide_0394 IPR004638 Drug resistance transporter EmrB-like Alide_0395 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Alide_0396 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Alide_0396 IPR003423 Outer membrane efflux protein Alide_0398 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB Alide_0398 IPR004488 Magnesium/cobalt transport protein CorA Alide_0399 IPR001731 Delta-aminolevulinic acid dehydratase Alide_0399 IPR030656 Delta-aminolevulinic acid dehydratase, active site Alide_0399 IPR013785 Aldolase-type TIM barrel Alide_0404 IPR029058 Alpha/Beta hydrolase fold Alide_0404 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain Alide_0405 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Alide_0405 IPR012338 Beta-lactamase/transpeptidase-like Alide_0405 IPR015956 Penicillin-binding protein, C-terminal domain superfamily Alide_0405 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily Alide_0405 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal Alide_0405 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Alide_0406 IPR006032 Ribosomal protein S12/S23 Alide_0406 IPR012340 Nucleic acid-binding, OB-fold Alide_0406 IPR005679 Ribosomal protein S12, bacterial-type Alide_0407 IPR023798 Ribosomal protein S7 domain Alide_0407 IPR020606 Ribosomal protein S7, conserved site Alide_0407 IPR005717 Ribosomal protein S7, bacterial/organellar-type Alide_0407 IPR000235 Ribosomal protein S5/S7 Alide_0407 IPR036823 Ribosomal protein S7 domain superfamily Alide_0408 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0408 IPR005517 Translation elongation factor EFG/EF2, domain IV Alide_0408 IPR005225 Small GTP-binding protein domain Alide_0408 IPR031157 Tr-type G domain, conserved site Alide_0408 IPR004161 Translation elongation factor EFTu-like, domain 2 Alide_0408 IPR000795 Transcription factor, GTP-binding domain Alide_0408 IPR009000 Translation protein, beta-barrel domain superfamily Alide_0408 IPR000640 Elongation factor EFG, domain V-like Alide_0408 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_0408 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Alide_0408 IPR035647 EF-G domain III/V-like Alide_0408 IPR035649 EFG, domain V Alide_0408 IPR004540 Translation elongation factor EFG/EF2 Alide_0408 IPR009022 Elongation factor G, domain III Alide_0408 IPR041095 Elongation Factor G, domain II Alide_0409 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Alide_0409 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle Alide_0409 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Alide_0409 IPR009000 Translation protein, beta-barrel domain superfamily Alide_0409 IPR000795 Transcription factor, GTP-binding domain Alide_0409 IPR005225 Small GTP-binding protein domain Alide_0409 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0409 IPR031157 Tr-type G domain, conserved site Alide_0409 IPR033720 Elongation factor Tu, domain 2 Alide_0409 IPR004161 Translation elongation factor EFTu-like, domain 2 Alide_0409 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain Alide_0410 IPR036838 Ribosomal protein S10 domain superfamily Alide_0410 IPR001848 Ribosomal protein S10 Alide_0410 IPR018268 Ribosomal protein S10, conserved site Alide_0410 IPR027486 Ribosomal protein S10 domain Alide_0411 IPR000597 Ribosomal protein L3 Alide_0411 IPR019927 Ribosomal protein L3, bacterial/organelle-type Alide_0411 IPR019926 Ribosomal protein L3, conserved site Alide_0411 IPR009000 Translation protein, beta-barrel domain superfamily Alide_0412 IPR023574 Ribosomal protein L4 domain superfamily Alide_0412 IPR013005 50S ribosomal protein uL4 Alide_0412 IPR002136 Ribosomal protein L4/L1e Alide_0413 IPR013025 Ribosomal protein L25/L23 Alide_0413 IPR012678 Ribosomal protein L23/L15e core domain superfamily Alide_0413 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Alide_0414 IPR008991 Translation protein SH3-like domain superfamily Alide_0414 IPR012340 Nucleic acid-binding, OB-fold Alide_0414 IPR022666 Ribosomal Proteins L2, RNA binding domain Alide_0414 IPR014722 Ribosomal protein L2, domain 2 Alide_0414 IPR002171 Ribosomal protein L2 Alide_0414 IPR005880 Ribosomal protein L2, bacterial/organellar-type Alide_0414 IPR022669 Ribosomal protein L2, C-terminal Alide_0414 IPR022671 Ribosomal protein L2, conserved site Alide_0414 IPR014726 Ribosomal protein L2, domain 3 Alide_0415 IPR023575 Ribosomal protein S19, superfamily Alide_0415 IPR020934 Ribosomal protein S19 conserved site Alide_0415 IPR002222 Ribosomal protein S19/S15 Alide_0415 IPR005732 Ribosomal protein S19, bacterial-type Alide_0416 IPR001063 Ribosomal protein L22/L17 Alide_0416 IPR018260 Ribosomal protein L22/L17, conserved site Alide_0416 IPR036394 Ribosomal protein L22/L17 superfamily Alide_0416 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type Alide_0417 IPR004044 K Homology domain, type 2 Alide_0417 IPR018280 Ribosomal protein S3, conserved site Alide_0417 IPR036419 Ribosomal protein S3, C-terminal domain superfamily Alide_0417 IPR005704 Ribosomal protein S3, bacterial-type Alide_0417 IPR009019 K homology domain superfamily, prokaryotic type Alide_0417 IPR004087 K Homology domain Alide_0417 IPR015946 K homology domain-like, alpha/beta Alide_0417 IPR001351 Ribosomal protein S3, C-terminal Alide_0418 IPR020798 Ribosomal protein L16, conserved site Alide_0418 IPR000114 Ribosomal protein L16 Alide_0418 IPR036920 Ribosomal protein L10e/L16 superfamily Alide_0418 IPR016180 Ribosomal protein L10e/L16 Alide_0419 IPR018254 Ribosomal protein L29, conserved site Alide_0419 IPR001854 Ribosomal protein L29/L35 Alide_0419 IPR036049 Ribosomal protein L29/L35 superfamily Alide_0420 IPR012340 Nucleic acid-binding, OB-fold Alide_0420 IPR019979 Ribosomal protein S17, conserved site Alide_0420 IPR000266 Ribosomal protein S17/S11 Alide_0420 IPR019984 30S ribosomal protein S17 Alide_0421 IPR011906 Glutaredoxin domain Alide_0421 IPR014025 Glutaredoxin subgroup Alide_0421 IPR037944 Peroxiredoxin-5-like Alide_0421 IPR002109 Glutaredoxin Alide_0421 IPR036249 Thioredoxin-like superfamily Alide_0421 IPR013740 Redoxin Alide_0421 IPR011767 Glutaredoxin active site Alide_0424 IPR023555 Thiol-disulphide oxidoreductase ResA Alide_0424 IPR036249 Thioredoxin-like superfamily Alide_0424 IPR013766 Thioredoxin domain Alide_0424 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Alide_0427 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Alide_0427 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Alide_0427 IPR035895 HPr-like superfamily Alide_0427 IPR000032 Phosphocarrier protein HPr-like Alide_0428 IPR023151 PEP-utilising enzyme, conserved site Alide_0428 IPR008731 Phosphotransferase system, enzyme I N-terminal Alide_0428 IPR036637 Phosphohistidine domain superfamily Alide_0428 IPR024692 Phosphotransferase system, enzyme I Alide_0428 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_0428 IPR040442 Pyruvate kinase-like domain superfamily Alide_0428 IPR000121 PEP-utilising enzyme, C-terminal Alide_0428 IPR018274 PEP-utilising enzyme, active site Alide_0428 IPR008279 PEP-utilising enzyme, mobile domain Alide_0428 IPR036618 PtsI, HPr-binding domain superfamily Alide_0428 IPR006318 Phosphotransferase system, enzyme I-like Alide_0429 IPR006638 Elp3/MiaB/NifB Alide_0429 IPR007197 Radical SAM Alide_0429 IPR031691 Lipoyl synthase, N-terminal Alide_0429 IPR013785 Aldolase-type TIM barrel Alide_0429 IPR003698 Lipoyl synthase Alide_0430 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain Alide_0430 IPR000544 Octanoyltransferase Alide_0430 IPR020605 Octanoyltransferase, conserved site Alide_0431 IPR027471 YbeD-like domain superfamily Alide_0431 IPR007454 Uncharacterised protein family UPF0250 Alide_0433 IPR000568 ATP synthase, F0 complex, subunit A Alide_0433 IPR035908 ATP synthase, F0 complex, subunit A superfamily Alide_0433 IPR023011 ATP synthase, F0 complex, subunit A, active site Alide_0434 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast Alide_0434 IPR000454 ATP synthase, F0 complex, subunit C Alide_0434 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Alide_0434 IPR038662 F1F0 ATP synthase subunit C superfamily Alide_0434 IPR002379 V-ATPase proteolipid subunit C-like domain Alide_0434 IPR035921 F/V-ATP synthase subunit C superfamily Alide_0435 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Alide_0435 IPR005864 ATP synthase, F0 complex, subunit b, bacterial Alide_0435 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast Alide_0436 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Alide_0436 IPR000711 ATPase, OSCP/delta subunit Alide_0437 IPR005294 ATP synthase, F1 complex, alpha subunit Alide_0437 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain Alide_0437 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily Alide_0437 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Alide_0437 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily Alide_0437 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Alide_0437 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Alide_0437 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily Alide_0437 IPR000793 ATP synthase, alpha subunit, C-terminal Alide_0437 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0438 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily Alide_0438 IPR000131 ATP synthase, F1 complex, gamma subunit Alide_0438 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Alide_0439 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Alide_0439 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0439 IPR005722 ATP synthase, F1 complex, beta subunit Alide_0439 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Alide_0439 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily Alide_0439 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal Alide_0439 IPR003593 AAA+ ATPase domain Alide_0439 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Alide_0440 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal Alide_0440 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Alide_0440 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit Alide_0440 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Alide_0444 IPR000847 Transcription regulator HTH, LysR Alide_0444 IPR005119 LysR, substrate-binding Alide_0444 IPR036390 Winged helix DNA-binding domain superfamily Alide_0444 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0450 IPR002323 Cytochrome c, class IE Alide_0450 IPR036909 Cytochrome c-like domain superfamily Alide_0450 IPR009056 Cytochrome c-like domain Alide_0451 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Alide_0451 IPR003423 Outer membrane efflux protein Alide_0452 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Alide_0452 IPR001036 Acriflavin resistance protein Alide_0452 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Alide_0453 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Alide_0453 IPR006143 RND efflux pump, membrane fusion protein Alide_0454 IPR013572 Transcription regulator MAATS, C-terminal Alide_0454 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Alide_0454 IPR009057 Homeobox-like domain superfamily Alide_0454 IPR001647 DNA-binding HTH domain, TetR-type Alide_0454 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Alide_0455 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle Alide_0455 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Alide_0455 IPR009000 Translation protein, beta-barrel domain superfamily Alide_0455 IPR000795 Transcription factor, GTP-binding domain Alide_0455 IPR005225 Small GTP-binding protein domain Alide_0455 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0455 IPR031157 Tr-type G domain, conserved site Alide_0455 IPR033720 Elongation factor Tu, domain 2 Alide_0455 IPR004161 Translation elongation factor EFTu-like, domain 2 Alide_0455 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain Alide_0455 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Alide_0456 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit Alide_0456 IPR038379 SecE superfamily Alide_0456 IPR005807 SecE subunit of protein translocation complex, bacterial-like Alide_0457 IPR005824 KOW Alide_0457 IPR006645 NusG, N-terminal Alide_0457 IPR036735 NusG, N-terminal domain superfamily Alide_0457 IPR014722 Ribosomal protein L2, domain 2 Alide_0457 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Alide_0457 IPR008991 Translation protein SH3-like domain superfamily Alide_0457 IPR001062 Transcription antitermination protein, NusG Alide_0458 IPR000911 Ribosomal protein L11/L12 Alide_0458 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Alide_0458 IPR006519 Ribosomal protein L11, bacterial-type Alide_0458 IPR020783 Ribosomal protein L11, C-terminal Alide_0458 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Alide_0458 IPR020785 Ribosomal protein L11, conserved site Alide_0458 IPR020784 Ribosomal protein L11, N-terminal Alide_0459 IPR023674 Ribosomal protein L1-like Alide_0459 IPR005878 Ribosomal protein L1, bacterial-type Alide_0459 IPR002143 Ribosomal protein L1 Alide_0459 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Alide_0459 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Alide_0459 IPR023673 Ribosomal protein L1, conserved site Alide_0460 IPR022973 Ribosomal protein L10 Alide_0460 IPR002363 Ribosomal protein L10, eubacterial, conserved site Alide_0460 IPR001790 Ribosomal protein L10P Alide_0461 IPR000206 Ribosomal protein L7/L12 Alide_0461 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Alide_0461 IPR013823 Ribosomal protein L7/L12, C-terminal Alide_0461 IPR008932 Ribosomal protein L7/L12, oligomerisation Alide_0461 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily Alide_0462 IPR014724 RNA polymerase Rpb2, OB-fold Alide_0462 IPR007641 RNA polymerase Rpb2, domain 7 Alide_0462 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain Alide_0462 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain Alide_0462 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily Alide_0462 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type Alide_0462 IPR007645 RNA polymerase Rpb2, domain 3 Alide_0462 IPR037034 RNA polymerase Rpb2, domain 2 superfamily Alide_0462 IPR007642 RNA polymerase Rpb2, domain 2 Alide_0462 IPR007644 RNA polymerase, beta subunit, protrusion Alide_0462 IPR015712 DNA-directed RNA polymerase, subunit 2 Alide_0462 IPR007121 RNA polymerase, beta subunit, conserved site Alide_0463 IPR012754 DNA-directed RNA polymerase, subunit beta-prime Alide_0463 IPR000722 RNA polymerase, alpha subunit Alide_0463 IPR006592 RNA polymerase, N-terminal Alide_0463 IPR007080 RNA polymerase Rpb1, domain 1 Alide_0463 IPR007066 RNA polymerase Rpb1, domain 3 Alide_0463 IPR007083 RNA polymerase Rpb1, domain 4 Alide_0463 IPR007081 RNA polymerase Rpb1, domain 5 Alide_0463 IPR038120 RNA polymerase Rpb1, funnel domain superfamily Alide_0463 IPR042102 RNA polymerase Rpb1, domain 3 superfamily Alide_0465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_0465 IPR004573 rRNA small subunit methyltransferase B Alide_0465 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site Alide_0465 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type Alide_0465 IPR035926 NusB-like superfamily Alide_0465 IPR006027 NusB/RsmB/TIM44 Alide_0465 IPR023267 RNA (C5-cytosine) methyltransferase Alide_0467 IPR035965 PAS domain superfamily Alide_0467 IPR000014 PAS domain Alide_0467 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator Alide_0467 IPR013767 PAS fold Alide_0467 IPR003660 HAMP domain Alide_0467 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_0467 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_0467 IPR005467 Histidine kinase domain Alide_0467 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_0467 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_0467 IPR003594 Histidine kinase/HSP90-like ATPase Alide_0468 IPR003593 AAA+ ATPase domain Alide_0468 IPR009057 Homeobox-like domain superfamily Alide_0468 IPR002197 DNA binding HTH domain, Fis-type Alide_0468 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0468 IPR001789 Signal transduction response regulator, receiver domain Alide_0468 IPR002078 RNA polymerase sigma factor 54 interaction domain Alide_0468 IPR025944 Sigma-54 interaction domain, conserved site Alide_0468 IPR011006 CheY-like superfamily Alide_0471 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Alide_0471 IPR001387 Cro/C1-type helix-turn-helix domain Alide_0472 IPR010359 IrrE N-terminal-like domain Alide_0473 IPR017894 HTH domain, IS21 transposase-type Alide_0473 IPR001584 Integrase, catalytic core Alide_0474 IPR003593 AAA+ ATPase domain Alide_0474 IPR001270 ClpA/B family Alide_0474 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Alide_0474 IPR002611 IstB-like ATP-binding protein Alide_0474 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0481 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Alide_0481 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type Alide_0481 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Alide_0481 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Alide_0481 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_0481 IPR036291 NAD(P)-binding domain superfamily Alide_0481 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Alide_0481 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Alide_0482 IPR001509 NAD-dependent epimerase/dehydratase Alide_0482 IPR036291 NAD(P)-binding domain superfamily Alide_0483 IPR038731 Glycosyltransferase RgtA/B/C/D-like Alide_0484 IPR029044 Nucleotide-diphospho-sugar transferases Alide_0484 IPR001173 Glycosyltransferase 2-like Alide_0486 IPR018063 SAM-dependent methyltransferase RsmI, conserved site Alide_0486 IPR008189 rRNA small subunit methyltransferase I Alide_0486 IPR014776 Tetrapyrrole methylase, subdomain 2 Alide_0486 IPR014777 Tetrapyrrole methylase, subdomain 1 Alide_0486 IPR035996 Tetrapyrrole methylase superfamily Alide_0486 IPR000878 Tetrapyrrole methylase Alide_0487 IPR003509 Uncharacterised protein family UPF0102 Alide_0487 IPR011856 tRNA endonuclease-like domain superfamily Alide_0487 IPR011335 Restriction endonuclease type II-like Alide_0488 IPR035461 GmhA/DiaA Alide_0488 IPR004515 Phosphoheptose isomerase Alide_0488 IPR001347 Sugar isomerase (SIS) Alide_0490 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Alide_0490 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Alide_0490 IPR036291 NAD(P)-binding domain superfamily Alide_0490 IPR015815 3-hydroxyisobutyrate dehydrogenase-related Alide_0490 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Alide_0490 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_0490 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site Alide_0491 IPR003593 AAA+ ATPase domain Alide_0491 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0491 IPR001482 Type II/IV secretion system protein Alide_0491 IPR006321 Pilus retraction protein PilT Alide_0492 IPR036390 Winged helix DNA-binding domain superfamily Alide_0492 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0492 IPR014710 RmlC-like jelly roll fold Alide_0492 IPR012318 Crp-type HTH domain Alide_0492 IPR000595 Cyclic nucleotide-binding domain Alide_0492 IPR018488 Cyclic nucleotide-binding, conserved site Alide_0492 IPR018490 Cyclic nucleotide-binding-like Alide_0493 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0493 IPR006321 Pilus retraction protein PilT Alide_0493 IPR003593 AAA+ ATPase domain Alide_0493 IPR001482 Type II/IV secretion system protein Alide_0494 IPR011078 Pyridoxal phosphate homeostasis protein Alide_0494 IPR001608 Alanine racemase, N-terminal Alide_0494 IPR029066 PLP-binding barrel Alide_0497 IPR007383 Protein of unknown function DUF445 Alide_0498 IPR004113 FAD-linked oxidase, C-terminal Alide_0498 IPR036318 FAD-binding, type PCMH-like superfamily Alide_0498 IPR004490 Glycolate oxidase subunit GlcD Alide_0498 IPR006094 FAD linked oxidase, N-terminal Alide_0498 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Alide_0498 IPR016166 FAD-binding domain, PCMH-type Alide_0498 IPR016164 FAD-linked oxidase-like, C-terminal Alide_0499 IPR036390 Winged helix DNA-binding domain superfamily Alide_0499 IPR000847 Transcription regulator HTH, LysR Alide_0499 IPR005119 LysR, substrate-binding Alide_0499 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0500 IPR036477 Formyl transferase, N-terminal domain superfamily Alide_0500 IPR004810 Formyltetrahydrofolate deformylase Alide_0500 IPR002376 Formyl transferase, N-terminal Alide_0500 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain Alide_0500 IPR002912 ACT domain Alide_0501 IPR035965 PAS domain superfamily Alide_0501 IPR000700 PAS-associated, C-terminal Alide_0501 IPR000014 PAS domain Alide_0501 IPR001610 PAC motif Alide_0501 IPR029787 Nucleotide cyclase Alide_0501 IPR000160 GGDEF domain Alide_0501 IPR035919 EAL domain superfamily Alide_0501 IPR001633 EAL domain Alide_0501 IPR013656 PAS fold-4 Alide_0501 IPR013655 PAS fold-3 Alide_0503 IPR005144 ATP-cone domain Alide_0503 IPR000788 Ribonucleotide reductase large subunit, C-terminal Alide_0503 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal Alide_0503 IPR013509 Ribonucleotide reductase large subunit, N-terminal Alide_0503 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent Alide_0504 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Alide_0504 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_0505 IPR001789 Signal transduction response regulator, receiver domain Alide_0505 IPR011006 CheY-like superfamily Alide_0505 IPR000792 Transcription regulator LuxR, C-terminal Alide_0505 IPR016032 Signal transduction response regulator, C-terminal effector Alide_0505 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0506 IPR020846 Major facilitator superfamily domain Alide_0506 IPR011701 Major facilitator superfamily Alide_0506 IPR036259 MFS transporter superfamily Alide_0507 IPR011701 Major facilitator superfamily Alide_0507 IPR036259 MFS transporter superfamily Alide_0507 IPR004737 Nitrate transporter Alide_0508 IPR006656 Molybdopterin oxidoreductase Alide_0508 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Alide_0508 IPR028189 Nitrate reductase, alpha subunit, N-terminal Alide_0508 IPR006468 Nitrate reductase, alpha subunit Alide_0508 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site Alide_0508 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site Alide_0508 IPR009010 Aspartate decarboxylase-like domain superfamily Alide_0508 IPR037943 Nitrate reductase alpha subunit-like, MopB domain Alide_0508 IPR006657 Molybdopterin dinucleotide-binding domain Alide_0509 IPR038262 Nitrate reductase beta, C-terminal domain superfamily Alide_0509 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_0509 IPR029263 Respiratory nitrate reductase beta, C-terminal Alide_0509 IPR006547 Nitrate reductase, beta subunit Alide_0510 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 Alide_0510 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 Alide_0510 IPR020945 DMSO/Nitrate reductase chaperone Alide_0510 IPR003765 Nitrate reductase chaperone, NarJ Alide_0510 IPR036411 TorD-like superfamily Alide_0511 IPR023234 NarG-like domain Alide_0511 IPR003816 Nitrate reductase, gamma subunit Alide_0511 IPR036197 NarG-like superfamily Alide_0513 IPR001765 Carbonic anhydrase Alide_0513 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site Alide_0513 IPR036874 Carbonic anhydrase superfamily Alide_0516 IPR012312 Haemerythrin-like Alide_0521 IPR006657 Molybdopterin dinucleotide-binding domain Alide_0521 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site Alide_0521 IPR009010 Aspartate decarboxylase-like domain superfamily Alide_0521 IPR037920 Probable oxidoreductase YoaE, C-terminal Alide_0521 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Alide_0521 IPR006656 Molybdopterin oxidoreductase Alide_0523 IPR011206 Citrate lyase beta subunit-like Alide_0523 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_0523 IPR040442 Pyruvate kinase-like domain superfamily Alide_0523 IPR005000 HpcH/HpaI aldolase/citrate lyase domain Alide_0524 IPR003673 CoA-transferase family III Alide_0524 IPR023606 CoA-transferase family III domain superfamily Alide_0525 IPR016790 Thiol ester hydratase, Rv0216, predicted Alide_0525 IPR029069 HotDog domain superfamily Alide_0525 IPR002539 MaoC-like dehydratase domain Alide_0526 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0526 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0526 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0526 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0526 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0526 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_0526 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0527 IPR029069 HotDog domain superfamily Alide_0527 IPR016790 Thiol ester hydratase, Rv0216, predicted Alide_0527 IPR002539 MaoC-like dehydratase domain Alide_0529 IPR005000 HpcH/HpaI aldolase/citrate lyase domain Alide_0529 IPR040442 Pyruvate kinase-like domain superfamily Alide_0529 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_0529 IPR011206 Citrate lyase beta subunit-like Alide_0531 IPR011650 Peptidase M20, dimerisation domain Alide_0531 IPR002933 Peptidase M20 Alide_0531 IPR017439 Amidohydrolase Alide_0531 IPR036264 Bacterial exopeptidase dimerisation domain Alide_0534 IPR004597 DNA-3-methyladenine glycosylase I Alide_0534 IPR005019 Methyladenine glycosylase Alide_0534 IPR011257 DNA glycosylase Alide_0536 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_0536 IPR003333 Mycolic acid cyclopropane synthase Alide_0538 IPR042100 Bordetella uptake gene, domain 1 Alide_0538 IPR005064 Bordetella uptake gene Alide_0539 IPR042100 Bordetella uptake gene, domain 1 Alide_0539 IPR005064 Bordetella uptake gene Alide_0540 IPR000873 AMP-dependent synthetase/ligase Alide_0540 IPR028154 AMP-dependent ligase, C-terminal Alide_0540 IPR042099 AMP-dependent synthetase-like superfamily Alide_0540 IPR011880 Phenylacetate-CoA ligase Alide_0541 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_0541 IPR003593 AAA+ ATPase domain Alide_0541 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0541 IPR017871 ABC transporter, conserved site Alide_0541 IPR003439 ABC transporter-like Alide_0544 IPR001851 ABC transporter, permease Alide_0545 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0545 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Alide_0545 IPR017871 ABC transporter, conserved site Alide_0545 IPR003439 ABC transporter-like Alide_0545 IPR003593 AAA+ ATPase domain Alide_0546 IPR020845 AMP-binding, conserved site Alide_0546 IPR042099 AMP-dependent synthetase-like superfamily Alide_0546 IPR000873 AMP-dependent synthetase/ligase Alide_0547 IPR036365 PGBD-like superfamily Alide_0547 IPR003593 AAA+ ATPase domain Alide_0547 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0547 IPR002477 Peptidoglycan binding-like Alide_0547 IPR036366 PGBD superfamily Alide_0549 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0549 IPR014710 RmlC-like jelly roll fold Alide_0549 IPR000595 Cyclic nucleotide-binding domain Alide_0549 IPR012318 Crp-type HTH domain Alide_0549 IPR018490 Cyclic nucleotide-binding-like Alide_0549 IPR036390 Winged helix DNA-binding domain superfamily Alide_0550 IPR006145 Pseudouridine synthase, RsuA/RluA Alide_0550 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Alide_0550 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Alide_0550 IPR002942 RNA-binding S4 domain Alide_0550 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain Alide_0550 IPR036986 RNA-binding S4 domain superfamily Alide_0550 IPR020103 Pseudouridine synthase, catalytic domain superfamily Alide_0551 IPR001404 Heat shock protein Hsp90 family Alide_0551 IPR020575 Heat shock protein Hsp90, N-terminal Alide_0551 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_0551 IPR037196 HSP90, C-terminal domain Alide_0551 IPR003594 Histidine kinase/HSP90-like ATPase Alide_0551 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_0551 IPR019805 Heat shock protein Hsp90, conserved site Alide_0553 IPR005064 Bordetella uptake gene Alide_0553 IPR042100 Bordetella uptake gene, domain 1 Alide_0554 IPR032882 SrkA/RdoA protein kinase Alide_0554 IPR011009 Protein kinase-like domain superfamily Alide_0554 IPR002575 Aminoglycoside phosphotransferase Alide_0555 IPR005543 PASTA domain Alide_0555 IPR000719 Protein kinase domain Alide_0555 IPR017441 Protein kinase, ATP binding site Alide_0555 IPR011009 Protein kinase-like domain superfamily Alide_0555 IPR008271 Serine/threonine-protein kinase, active site Alide_0557 IPR003673 CoA-transferase family III Alide_0557 IPR023606 CoA-transferase family III domain superfamily Alide_0559 IPR005064 Bordetella uptake gene Alide_0559 IPR042100 Bordetella uptake gene, domain 1 Alide_0560 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal Alide_0560 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_0560 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Alide_0560 IPR022694 3-hydroxyacyl-CoA dehydrogenase Alide_0560 IPR036291 NAD(P)-binding domain superfamily Alide_0560 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site Alide_0560 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding Alide_0561 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Alide_0561 IPR012132 Glucose-methanol-choline oxidoreductase Alide_0561 IPR027424 Glucose Oxidase, domain 2 Alide_0561 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_0561 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Alide_0564 IPR005981 ABC-2 type transporter, NodJ Alide_0564 IPR013525 ABC-2 type transporter Alide_0564 IPR000412 ABC-2 transporter Alide_0565 IPR015851 ABC transporter, NodI Alide_0565 IPR005978 Nodulation ABC transporter, NodI Alide_0565 IPR003593 AAA+ ATPase domain Alide_0565 IPR003439 ABC transporter-like Alide_0565 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0565 IPR017871 ABC transporter, conserved site Alide_0566 IPR011118 Tannase/feruloyl esterase Alide_0566 IPR029058 Alpha/Beta hydrolase fold Alide_0567 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily Alide_0567 IPR011271 AMP nucleosidase Alide_0567 IPR018953 AMP nucleoside phosphorylase, N-terminal Alide_0567 IPR000845 Nucleoside phosphorylase domain Alide_0567 IPR035994 Nucleoside phosphorylase superfamily Alide_0568 IPR000160 GGDEF domain Alide_0568 IPR029787 Nucleotide cyclase Alide_0568 IPR005330 MHYT domain Alide_0568 IPR035965 PAS domain superfamily Alide_0568 IPR000014 PAS domain Alide_0568 IPR001633 EAL domain Alide_0568 IPR035919 EAL domain superfamily Alide_0569 IPR027469 Cation efflux transmembrane domain superfamily Alide_0569 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Alide_0569 IPR027470 Cation efflux protein, cytoplasmic domain Alide_0569 IPR002524 Cation efflux protein Alide_0570 IPR003732 D-aminoacyl-tRNA deacylase DTD Alide_0570 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Alide_0571 IPR002781 Transmembrane protein TauE-like Alide_0572 IPR005119 LysR, substrate-binding Alide_0572 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0572 IPR036390 Winged helix DNA-binding domain superfamily Alide_0572 IPR000847 Transcription regulator HTH, LysR Alide_0573 IPR005064 Bordetella uptake gene Alide_0573 IPR042100 Bordetella uptake gene, domain 1 Alide_0574 IPR023606 CoA-transferase family III domain superfamily Alide_0574 IPR003673 CoA-transferase family III Alide_0575 IPR036291 NAD(P)-binding domain superfamily Alide_0575 IPR020843 Polyketide synthase, enoylreductase domain Alide_0575 IPR014188 Acrylyl-CoA reductase AcuI Alide_0575 IPR013149 Alcohol dehydrogenase, C-terminal Alide_0575 IPR013154 Alcohol dehydrogenase, N-terminal Alide_0575 IPR011032 GroES-like superfamily Alide_0576 IPR020845 AMP-binding, conserved site Alide_0576 IPR025110 AMP-binding enzyme, C-terminal domain Alide_0576 IPR000873 AMP-dependent synthetase/ligase Alide_0576 IPR020459 AMP-binding Alide_0576 IPR042099 AMP-dependent synthetase-like superfamily Alide_0577 IPR002036 Endoribonuclease YbeY Alide_0577 IPR023091 Metalloprotease catalytic domain superfamily, predicted Alide_0577 IPR020549 Endoribonuclease YbeY, conserved site Alide_0578 IPR003714 PhoH-like protein Alide_0578 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0579 IPR012340 Nucleic acid-binding, OB-fold Alide_0579 IPR000085 Bacterial DNA recombination protein RuvA Alide_0579 IPR010994 RuvA domain 2-like Alide_0579 IPR036267 RuvA, C-terminal domain superfamily Alide_0579 IPR011114 Holliday junction DNA helicase RuvA, C-terminal Alide_0579 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Alide_0579 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial Alide_0581 IPR010236 ISC system FeS cluster assembly, HscA chaperone Alide_0581 IPR013126 Heat shock protein 70 family Alide_0581 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Alide_0581 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Alide_0581 IPR042039 HscA chaperone, nucleotide-binding domain Alide_0581 IPR018181 Heat shock protein 70, conserved site Alide_0582 IPR012725 Chaperone DnaK Alide_0582 IPR018181 Heat shock protein 70, conserved site Alide_0582 IPR013126 Heat shock protein 70 family Alide_0582 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Alide_0584 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0584 IPR004605 DNA helicase, Holliday junction RuvB-type Alide_0584 IPR041445 RuvB, AAA lid domain Alide_0584 IPR003593 AAA+ ATPase domain Alide_0584 IPR008824 RuvB-like P-loop domain Alide_0584 IPR008823 RuvB C-terminal winged helix domain Alide_0584 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0584 IPR036390 Winged helix DNA-binding domain superfamily Alide_0585 IPR003416 MgtC/SapB/SrpB/YhiD family Alide_0588 IPR026956 D-serine dehydratase-like domain Alide_0588 IPR042208 D-serine dehydratase-like domain superfamily Alide_0588 IPR029066 PLP-binding barrel Alide_0588 IPR001608 Alanine racemase, N-terminal Alide_0589 IPR013078 Histidine phosphatase superfamily, clade-1 Alide_0589 IPR029033 Histidine phosphatase superfamily Alide_0589 IPR023086 Phosphoglycerate mutase, GpmB, probable Alide_0589 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site Alide_0591 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase Alide_0591 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Alide_0591 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_0598 IPR000600 ROK family Alide_0598 IPR023945 N-acetylmannosamine kinase, bacterial Alide_0599 IPR012766 Alpha,alpha-trehalose-phosphate synthase Alide_0599 IPR001830 Glycosyl transferase, family 20 Alide_0601 IPR006379 HAD-superfamily hydrolase, subfamily IIB Alide_0601 IPR036412 HAD-like superfamily Alide_0601 IPR023214 HAD superfamily Alide_0601 IPR003337 Trehalose-phosphatase Alide_0602 IPR013766 Thioredoxin domain Alide_0602 IPR005746 Thioredoxin Alide_0602 IPR017937 Thioredoxin, conserved site Alide_0602 IPR036249 Thioredoxin-like superfamily Alide_0603 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Alide_0603 IPR012006 tRNA nucleotidyltransferase, proteobacteria Alide_0603 IPR002646 Poly A polymerase, head domain Alide_0603 IPR006674 HD domain Alide_0603 IPR003607 HD/PDEase domain Alide_0604 IPR009057 Homeobox-like domain superfamily Alide_0604 IPR003018 GAF domain Alide_0604 IPR029016 GAF-like domain superfamily Alide_0604 IPR025944 Sigma-54 interaction domain, conserved site Alide_0604 IPR002197 DNA binding HTH domain, Fis-type Alide_0604 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0604 IPR002078 RNA polymerase sigma factor 54 interaction domain Alide_0604 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Alide_0604 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Alide_0604 IPR003593 AAA+ ATPase domain Alide_0607 IPR042100 Bordetella uptake gene, domain 1 Alide_0607 IPR005064 Bordetella uptake gene Alide_0610 IPR037171 NagB/RpiA transferase-like Alide_0610 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Alide_0610 IPR002698 5-formyltetrahydrofolate cyclo-ligase Alide_0611 IPR016047 Peptidase M23 Alide_0611 IPR023346 Lysozyme-like domain superfamily Alide_0611 IPR010090 Phage tail tape measure protein Alide_0611 IPR000189 Prokaryotic transglycosylase, active site Alide_0611 IPR011055 Duplicated hybrid motif Alide_0611 IPR008258 Transglycosylase SLT domain 1 Alide_0614 IPR005123 Oxoglutarate/iron-dependent dioxygenase Alide_0614 IPR023550 PKHD-type hydroxylase Alide_0614 IPR006620 Prolyl 4-hydroxylase, alpha subunit Alide_0614 IPR041097 PKHD-type hydroxylase C-terminal domain Alide_0615 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent Alide_0615 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site Alide_0615 IPR013785 Aldolase-type TIM barrel Alide_0615 IPR037396 FMN hydroxy acid dehydrogenase domain Alide_0615 IPR000262 FMN-dependent dehydrogenase Alide_0616 IPR037066 TonB-dependent receptor, plug domain superfamily Alide_0616 IPR039423 TonB-dependent receptor-like Alide_0616 IPR030148 Catecholate siderophore receptor Fiu Alide_0616 IPR000531 TonB-dependent receptor-like, beta-barrel Alide_0616 IPR012910 TonB-dependent receptor, plug domain Alide_0616 IPR010105 TonB-dependent siderophore receptor Alide_0616 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Alide_0618 IPR025110 AMP-binding enzyme, C-terminal domain Alide_0618 IPR020845 AMP-binding, conserved site Alide_0618 IPR000873 AMP-dependent synthetase/ligase Alide_0618 IPR042099 AMP-dependent synthetase-like superfamily Alide_0620 IPR000794 Beta-ketoacyl synthase Alide_0620 IPR018201 Beta-ketoacyl synthase, active site Alide_0620 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Alide_0620 IPR014031 Beta-ketoacyl synthase, C-terminal Alide_0620 IPR014030 Beta-ketoacyl synthase, N-terminal Alide_0620 IPR016039 Thiolase-like Alide_0621 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ Alide_0621 IPR029069 HotDog domain superfamily Alide_0621 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA Alide_0622 IPR004563 Apolipoprotein N-acyltransferase Alide_0622 IPR036526 Carbon-nitrogen hydrolase superfamily Alide_0622 IPR003010 Carbon-nitrogen hydrolase Alide_0623 IPR036318 FAD-binding, type PCMH-like superfamily Alide_0623 IPR005170 Transporter-associated domain Alide_0623 IPR000644 CBS domain Alide_0623 IPR016169 FAD-binding, type PCMH, subdomain 2 Alide_0625 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0625 IPR000485 AsnC-type HTH domain Alide_0625 IPR011008 Dimeric alpha-beta barrel Alide_0625 IPR019888 Transcription regulator AsnC-type Alide_0625 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Alide_0625 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Alide_0625 IPR036390 Winged helix DNA-binding domain superfamily Alide_0626 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Alide_0626 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal Alide_0626 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal Alide_0626 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Alide_0626 IPR037523 Vicinal oxygen chelate (VOC) domain Alide_0626 IPR005956 4-hydroxyphenylpyruvate dioxygenase Alide_0627 IPR001273 Aromatic amino acid hydroxylase Alide_0627 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site Alide_0627 IPR005960 Phenylalanine-4-hydroxylase, monomeric form Alide_0627 IPR019774 Aromatic amino acid hydroxylase, C-terminal Alide_0627 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily Alide_0627 IPR036951 Aromatic amino acid hydroxylase superfamily Alide_0628 IPR029061 Thiamin diphosphate-binding fold Alide_0628 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain Alide_0628 IPR001017 Dehydrogenase, E1 component Alide_0629 IPR033248 Transketolase, C-terminal domain Alide_0629 IPR005475 Transketolase-like, pyrimidine-binding domain Alide_0629 IPR029061 Thiamin diphosphate-binding fold Alide_0629 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Alide_0630 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Alide_0630 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Alide_0630 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain Alide_0630 IPR000089 Biotin/lipoyl attachment Alide_0630 IPR011053 Single hybrid motif Alide_0630 IPR004167 Peripheral subunit-binding domain Alide_0630 IPR036625 E3-binding domain superfamily Alide_0631 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I Alide_0631 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Alide_0631 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Alide_0631 IPR023753 FAD/NAD(P)-binding domain Alide_0631 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Alide_0631 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_0631 IPR006258 Dihydrolipoamide dehydrogenase Alide_0632 IPR006194 Glycine-tRNA synthetase, heterodimeric Alide_0632 IPR002310 Glycine-tRNA ligase, alpha subunit Alide_0633 IPR006194 Glycine-tRNA synthetase, heterodimeric Alide_0633 IPR015944 Glycine-tRNA ligase, beta subunit Alide_0633 IPR008909 DALR anticodon binding Alide_0634 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase Alide_0634 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Alide_0634 IPR036412 HAD-like superfamily Alide_0634 IPR006543 Histidinol-phosphate phosphatase Alide_0634 IPR023214 HAD superfamily Alide_0635 IPR002123 Phospholipid/glycerol acyltransferase Alide_0635 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase Alide_0638 IPR014004 Transport-associated and nodulation domain, bacteria Alide_0638 IPR036779 LysM domain superfamily Alide_0638 IPR018392 LysM domain Alide_0638 IPR007055 BON domain Alide_0639 IPR004619 Type III pantothenate kinase Alide_0640 IPR013572 Transcription regulator MAATS, C-terminal Alide_0640 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Alide_0640 IPR001647 DNA-binding HTH domain, TetR-type Alide_0640 IPR009057 Homeobox-like domain superfamily Alide_0640 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Alide_0642 IPR036291 NAD(P)-binding domain superfamily Alide_0642 IPR016040 NAD(P)-binding domain Alide_0642 IPR005888 dTDP-glucose 4,6-dehydratase Alide_0643 IPR029903 RmlD-like substrate binding domain Alide_0643 IPR036291 NAD(P)-binding domain superfamily Alide_0643 IPR005913 dTDP-4-dehydrorhamnose reductase family Alide_0644 IPR005835 Nucleotidyl transferase domain Alide_0644 IPR029044 Nucleotide-diphospho-sugar transferases Alide_0644 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form Alide_0645 IPR011051 RmlC-like cupin domain superfamily Alide_0645 IPR014710 RmlC-like jelly roll fold Alide_0645 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related Alide_0647 IPR029044 Nucleotide-diphospho-sugar transferases Alide_0647 IPR001173 Glycosyltransferase 2-like Alide_0647 IPR006446 Rhamnosyltransferase Alide_0648 IPR042181 Type II secretion system, protein E, N-terminal Alide_0648 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0648 IPR003593 AAA+ ATPase domain Alide_0648 IPR001482 Type II/IV secretion system protein Alide_0648 IPR007831 General secretory system II, protein E, N-terminal Alide_0648 IPR013369 Type II secretion system GspE Alide_0648 IPR037257 General secretory system II, protein E, N-terminal superfamily Alide_0649 IPR003004 GspF/PilC family Alide_0649 IPR011850 General secretion pathway protein F Alide_0649 IPR001992 Type II secretion system conserved site Alide_0649 IPR018076 Type II secretion system F domain Alide_0649 IPR042094 Type II secretion system F domain superfamily Alide_0651 IPR012902 Prokaryotic N-terminal methylation site Alide_0651 IPR000983 Bacterial general secretion pathway protein G-type pilin Alide_0651 IPR001082 Fimbrial protein pilin Alide_0653 IPR012902 Prokaryotic N-terminal methylation site Alide_0653 IPR010055 Type II secretion system protein J Alide_0654 IPR038072 GspK, central domain superfamily Alide_0654 IPR005628 General secretion pathway protein K Alide_0658 IPR013356 Type II secretion system GspD Alide_0658 IPR004845 Type II secretion system GspD, conserved site Alide_0658 IPR004846 Type II/III secretion system Alide_0658 IPR038591 NolW-like superfamily Alide_0658 IPR005644 NolW-like Alide_0658 IPR001775 GspD/PilQ family Alide_0664 IPR001173 Glycosyltransferase 2-like Alide_0664 IPR029044 Nucleotide-diphospho-sugar transferases Alide_0666 IPR000412 ABC-2 transporter Alide_0666 IPR013525 ABC-2 type transporter Alide_0667 IPR003593 AAA+ ATPase domain Alide_0667 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0667 IPR003439 ABC transporter-like Alide_0667 IPR029439 Wzt, C-terminal Alide_0669 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site Alide_0669 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal Alide_0669 IPR011530 Ribosomal RNA adenine dimethylase Alide_0669 IPR023165 rRNA adenine dimethylase-like Alide_0669 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_0669 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Alide_0670 IPR016047 Peptidase M23 Alide_0670 IPR011055 Duplicated hybrid motif Alide_0670 IPR023346 Lysozyme-like domain superfamily Alide_0670 IPR008258 Transglycosylase SLT domain 1 Alide_0670 IPR000189 Prokaryotic transglycosylase, active site Alide_0670 IPR010090 Phage tail tape measure protein Alide_0672 IPR036393 Acetylglutamate kinase-like superfamily Alide_0672 IPR041727 N-Acetyl-L-glutamate kinase, cyclic Alide_0672 IPR001057 Glutamate/acetylglutamate kinase Alide_0672 IPR001048 Aspartate/glutamate/uridylate kinase Alide_0672 IPR037528 Acetylglutamate kinase ArgB Alide_0672 IPR004662 Acetylglutamate kinase family Alide_0675 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_0675 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_0675 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_0675 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_0675 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_0675 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_0675 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Alide_0677 IPR001753 Enoyl-CoA hydratase/isomerase Alide_0677 IPR036291 NAD(P)-binding domain superfamily Alide_0677 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Alide_0677 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_0677 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal Alide_0677 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding Alide_0677 IPR029045 ClpP/crotonase-like domain superfamily Alide_0678 IPR020616 Thiolase, N-terminal Alide_0678 IPR016039 Thiolase-like Alide_0678 IPR002155 Thiolase Alide_0678 IPR020610 Thiolase, active site Alide_0678 IPR020613 Thiolase, conserved site Alide_0678 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_0678 IPR020617 Thiolase, C-terminal Alide_0680 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_0680 IPR029045 ClpP/crotonase-like domain superfamily Alide_0680 IPR001753 Enoyl-CoA hydratase/isomerase Alide_0682 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain Alide_0682 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase Alide_0682 IPR029069 HotDog domain superfamily Alide_0682 IPR006683 Thioesterase domain Alide_0683 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0683 IPR017871 ABC transporter, conserved site Alide_0683 IPR003439 ABC transporter-like Alide_0683 IPR036640 ABC transporter type 1, transmembrane domain superfamily Alide_0683 IPR003593 AAA+ ATPase domain Alide_0683 IPR039421 Type I protein exporter Alide_0683 IPR011527 ABC transporter type 1, transmembrane domain Alide_0684 IPR020845 AMP-binding, conserved site Alide_0684 IPR025110 AMP-binding enzyme, C-terminal domain Alide_0684 IPR011963 2,3-dihydroxybenzoate-AMP ligase Alide_0684 IPR042099 AMP-dependent synthetase-like superfamily Alide_0684 IPR000873 AMP-dependent synthetase/ligase Alide_0688 IPR000847 Transcription regulator HTH, LysR Alide_0688 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0688 IPR036390 Winged helix DNA-binding domain superfamily Alide_0688 IPR005119 LysR, substrate-binding Alide_0690 IPR038404 TRAP transporter solute receptor DctP superfamily Alide_0690 IPR018389 TRAP transporter solute receptor DctP/TeaA Alide_0690 IPR004682 TRAP transporter solute receptor, DctP family Alide_0691 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Alide_0691 IPR004681 TRAP transporter large membrane protein DctM Alide_0692 IPR007387 TRAP transporter, small membrane protein DctQ Alide_0693 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0693 IPR036390 Winged helix DNA-binding domain superfamily Alide_0693 IPR005119 LysR, substrate-binding Alide_0693 IPR000847 Transcription regulator HTH, LysR Alide_0694 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Alide_0695 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ Alide_0695 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_0695 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Alide_0695 IPR035906 MetI-like superfamily Alide_0696 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Alide_0696 IPR035906 MetI-like superfamily Alide_0696 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_0696 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM Alide_0697 IPR003593 AAA+ ATPase domain Alide_0697 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type Alide_0697 IPR017871 ABC transporter, conserved site Alide_0697 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0697 IPR003439 ABC transporter-like Alide_0698 IPR036291 NAD(P)-binding domain superfamily Alide_0698 IPR003462 Ornithine cyclodeaminase/mu-crystallin Alide_0698 IPR023401 Ornithine cyclodeaminase, N-terminal Alide_0700 IPR035647 EF-G domain III/V-like Alide_0700 IPR032090 Peptide chain release factor 3, C-terminal Alide_0700 IPR031157 Tr-type G domain, conserved site Alide_0700 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0700 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Alide_0700 IPR041732 Peptide chain release factor 3, GTP-binding domain Alide_0700 IPR005225 Small GTP-binding protein domain Alide_0700 IPR000795 Transcription factor, GTP-binding domain Alide_0700 IPR009000 Translation protein, beta-barrel domain superfamily Alide_0700 IPR004161 Translation elongation factor EFTu-like, domain 2 Alide_0700 IPR004548 Peptide chain release factor 3 Alide_0701 IPR036291 NAD(P)-binding domain superfamily Alide_0701 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_0702 IPR000043 Adenosylhomocysteinase-like Alide_0702 IPR042172 Adenosylhomocysteinase-like superfamily Alide_0702 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site Alide_0702 IPR036291 NAD(P)-binding domain superfamily Alide_0702 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Alide_0703 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_0703 IPR036986 RNA-binding S4 domain superfamily Alide_0703 IPR002942 RNA-binding S4 domain Alide_0703 IPR002877 Ribosomal RNA methyltransferase FtsJ domain Alide_0703 IPR004538 Haemolysin A /rRNA methyltransferase TlyA Alide_0704 IPR004620 5,10-methylenetetrahydrofolate reductase Alide_0704 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase Alide_0704 IPR029041 FAD-linked oxidoreductase-like Alide_0704 IPR003171 Methylenetetrahydrofolate reductase Alide_0705 IPR034718 Endolytic peptidoglycan transglycosylase RlpA Alide_0705 IPR036908 RlpA-like domain superfamily Alide_0705 IPR012997 Rare lipoprotein A Alide_0705 IPR009009 RlpA-like protein, double-psi beta-barrel domain Alide_0706 IPR007473 Ribosomal RNA large subunit methyltransferase J Alide_0706 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_0707 IPR011009 Protein kinase-like domain superfamily Alide_0707 IPR013229 PEGA Alide_0707 IPR000719 Protein kinase domain Alide_0707 IPR008266 Tyrosine-protein kinase, active site Alide_0708 IPR005822 Ribosomal protein L13 Alide_0708 IPR005823 Ribosomal protein L13, bacterial-type Alide_0708 IPR036899 Ribosomal protein L13 superfamily Alide_0709 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_0709 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Alide_0709 IPR000754 Ribosomal protein S9 Alide_0709 IPR023035 Ribosomal protein S9, bacterial/plastid Alide_0709 IPR020574 Ribosomal protein S9, conserved site Alide_0710 IPR017870 FeS cluster insertion, C-terminal, conserved site Alide_0710 IPR035903 HesB-like domain superfamily Alide_0710 IPR023063 FeS cluster insertion protein ErpA Alide_0710 IPR016092 FeS cluster insertion protein Alide_0710 IPR000361 FeS cluster biogenesis Alide_0712 IPR005338 Anhydro-N-acetylmuramic acid kinase Alide_0713 IPR007340 Opacity-associated protein A Alide_0713 IPR011055 Duplicated hybrid motif Alide_0713 IPR016047 Peptidase M23 Alide_0715 IPR036390 Winged helix DNA-binding domain superfamily Alide_0715 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0715 IPR000847 Transcription regulator HTH, LysR Alide_0715 IPR005119 LysR, substrate-binding Alide_0716 IPR011004 Trimeric LpxA-like superfamily Alide_0716 IPR029044 Nucleotide-diphospho-sugar transferases Alide_0716 IPR025877 MobA-like NTP transferase Alide_0716 IPR001451 Hexapeptide repeat Alide_0716 IPR038009 GlmU, C-terminal LbH domain Alide_0716 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase Alide_0717 IPR003018 GAF domain Alide_0717 IPR029016 GAF-like domain superfamily Alide_0717 IPR003594 Histidine kinase/HSP90-like ATPase Alide_0717 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal Alide_0717 IPR025201 Sensor protein KdpD, transmembrane domain Alide_0717 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_0717 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_0717 IPR038318 KdpD, transmembrane domain superfamily Alide_0717 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_0717 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_0717 IPR005467 Histidine kinase domain Alide_0719 IPR018253 DnaJ domain, conserved site Alide_0719 IPR001623 DnaJ domain Alide_0719 IPR036869 Chaperone J-domain superfamily Alide_0719 IPR002939 Chaperone DnaJ, C-terminal Alide_0719 IPR023859 DNA-binding protein, curved-DNA Alide_0719 IPR008971 HSP40/DnaJ peptide-binding Alide_0720 IPR036390 Winged helix DNA-binding domain superfamily Alide_0720 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0720 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Alide_0720 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Alide_0720 IPR011991 ArsR-like helix-turn-helix domain Alide_0720 IPR011008 Dimeric alpha-beta barrel Alide_0720 IPR000485 AsnC-type HTH domain Alide_0720 IPR019888 Transcription regulator AsnC-type Alide_0721 IPR035466 GlmS/AgaS, SIS domain 1 Alide_0721 IPR001347 Sugar isomerase (SIS) Alide_0721 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising Alide_0721 IPR029055 Nucleophile aminohydrolases, N-terminal Alide_0721 IPR035490 GlmS/FrlB, SIS domain 2 Alide_0721 IPR017932 Glutamine amidotransferase type 2 domain Alide_0725 IPR036397 Ribonuclease H superfamily Alide_0725 IPR001584 Integrase, catalytic core Alide_0725 IPR012337 Ribonuclease H-like superfamily Alide_0725 IPR025948 HTH-like domain Alide_0726 IPR002514 Transposase IS3/IS911family Alide_0726 IPR009057 Homeobox-like domain superfamily Alide_0726 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0729 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily Alide_0729 IPR000572 Oxidoreductase, molybdopterin-binding domain Alide_0730 IPR016174 Di-haem cytochrome, transmembrane Alide_0730 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Alide_0731 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0731 IPR011006 CheY-like superfamily Alide_0731 IPR001789 Signal transduction response regulator, receiver domain Alide_0731 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_0731 IPR016032 Signal transduction response regulator, C-terminal effector Alide_0731 IPR039420 Transcriptional regulatory protein WalR-like Alide_0732 IPR013767 PAS fold Alide_0732 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_0732 IPR041328 ResE, histidine kinase sensor domain Alide_0732 IPR035965 PAS domain superfamily Alide_0732 IPR000014 PAS domain Alide_0732 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_0732 IPR003660 HAMP domain Alide_0732 IPR003594 Histidine kinase/HSP90-like ATPase Alide_0732 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_0732 IPR005467 Histidine kinase domain Alide_0732 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_0735 IPR005835 Nucleotidyl transferase domain Alide_0735 IPR029044 Nucleotide-diphospho-sugar transferases Alide_0735 IPR014710 RmlC-like jelly roll fold Alide_0735 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Alide_0735 IPR011051 RmlC-like cupin domain superfamily Alide_0735 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal Alide_0738 IPR025669 AAA domain Alide_0738 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0738 IPR005702 Exopolysaccharide synthesis protein Alide_0740 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0740 IPR036365 PGBD-like superfamily Alide_0740 IPR036366 PGBD superfamily Alide_0740 IPR002477 Peptidoglycan binding-like Alide_0740 IPR003593 AAA+ ATPase domain Alide_0745 IPR033738 Asparagine synthase, N-terminal domain Alide_0745 IPR029055 Nucleophile aminohydrolases, N-terminal Alide_0745 IPR017932 Glutamine amidotransferase type 2 domain Alide_0745 IPR006426 Asparagine synthase, glutamine-hydrolyzing Alide_0745 IPR001962 Asparagine synthase Alide_0746 IPR001296 Glycosyl transferase, family 1 Alide_0747 IPR013534 Starch synthase, catalytic domain Alide_0747 IPR001296 Glycosyl transferase, family 1 Alide_0747 IPR011835 Bacterial/plant glycogen synthase Alide_0748 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like Alide_0748 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Alide_0749 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_0749 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Alide_0749 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Alide_0749 IPR036291 NAD(P)-binding domain superfamily Alide_0749 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase Alide_0749 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Alide_0749 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Alide_0749 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Alide_0750 IPR017814 Mycothiol biosynthesis protein, MshA Alide_0750 IPR001296 Glycosyl transferase, family 1 Alide_0750 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Alide_0756 IPR029044 Nucleotide-diphospho-sugar transferases Alide_0756 IPR001173 Glycosyltransferase 2-like Alide_0758 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Alide_0758 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Alide_0758 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_0758 IPR036291 NAD(P)-binding domain superfamily Alide_0758 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Alide_0758 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Alide_0758 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Alide_0758 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase Alide_0759 IPR036291 NAD(P)-binding domain superfamily Alide_0759 IPR001509 NAD-dependent epimerase/dehydratase Alide_0767 IPR020459 AMP-binding Alide_0767 IPR000873 AMP-dependent synthetase/ligase Alide_0767 IPR020845 AMP-binding, conserved site Alide_0767 IPR042099 AMP-dependent synthetase-like superfamily Alide_0767 IPR025110 AMP-binding enzyme, C-terminal domain Alide_0768 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Alide_0768 IPR000183 Ornithine/DAP/Arg decarboxylase Alide_0768 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal Alide_0768 IPR029066 PLP-binding barrel Alide_0768 IPR002986 Diaminopimelate decarboxylase, LysA Alide_0768 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Alide_0768 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal Alide_0769 IPR005467 Histidine kinase domain Alide_0769 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_0769 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_0769 IPR003594 Histidine kinase/HSP90-like ATPase Alide_0769 IPR003660 HAMP domain Alide_0769 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_0769 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_0770 IPR001789 Signal transduction response regulator, receiver domain Alide_0770 IPR002197 DNA binding HTH domain, Fis-type Alide_0770 IPR009057 Homeobox-like domain superfamily Alide_0770 IPR011006 CheY-like superfamily Alide_0770 IPR002078 RNA polymerase sigma factor 54 interaction domain Alide_0770 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Alide_0770 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Alide_0770 IPR003593 AAA+ ATPase domain Alide_0770 IPR025944 Sigma-54 interaction domain, conserved site Alide_0770 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0773 IPR004368 Translation initiation factor IF-1 Alide_0773 IPR012340 Nucleic acid-binding, OB-fold Alide_0773 IPR006196 RNA-binding domain, S1, IF1 type Alide_0774 IPR004574 Alkylated DNA repair protein AlkB Alide_0774 IPR005123 Oxoglutarate/iron-dependent dioxygenase Alide_0774 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily Alide_0774 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like Alide_0775 IPR020845 AMP-binding, conserved site Alide_0775 IPR025110 AMP-binding enzyme, C-terminal domain Alide_0775 IPR010192 2-succinylbenzoate--CoA ligase Alide_0775 IPR000873 AMP-dependent synthetase/ligase Alide_0775 IPR042099 AMP-dependent synthetase-like superfamily Alide_0776 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Alide_0776 IPR017938 Riboflavin synthase-like beta-barrel Alide_0776 IPR001433 Oxidoreductase FAD/NAD(P)-binding Alide_0776 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Alide_0776 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Alide_0776 IPR017927 FAD-binding domain, ferredoxin reductase-type Alide_0776 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Alide_0776 IPR012675 Beta-grasp domain superfamily Alide_0776 IPR036010 2Fe-2S ferredoxin-like superfamily Alide_0780 IPR010292 Uncharacterised protein family CreA Alide_0783 IPR017871 ABC transporter, conserved site Alide_0783 IPR003593 AAA+ ATPase domain Alide_0783 IPR011527 ABC transporter type 1, transmembrane domain Alide_0783 IPR036640 ABC transporter type 1, transmembrane domain superfamily Alide_0783 IPR003439 ABC transporter-like Alide_0783 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0783 IPR039421 Type I protein exporter Alide_0783 IPR011917 ABC transporter, lipid A export, MsbA Alide_0786 IPR000640 Elongation factor EFG, domain V-like Alide_0786 IPR004161 Translation elongation factor EFTu-like, domain 2 Alide_0786 IPR035649 EFG, domain V Alide_0786 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_0786 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0786 IPR035647 EF-G domain III/V-like Alide_0786 IPR009000 Translation protein, beta-barrel domain superfamily Alide_0786 IPR000795 Transcription factor, GTP-binding domain Alide_0786 IPR009022 Elongation factor G, domain III Alide_0786 IPR005225 Small GTP-binding protein domain Alide_0786 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Alide_0786 IPR041095 Elongation Factor G, domain II Alide_0786 IPR005517 Translation elongation factor EFG/EF2, domain IV Alide_0788 IPR018076 Type II secretion system F domain Alide_0788 IPR011850 General secretion pathway protein F Alide_0788 IPR001992 Type II secretion system conserved site Alide_0788 IPR042094 Type II secretion system F domain superfamily Alide_0788 IPR003004 GspF/PilC family Alide_0789 IPR036661 Luciferase-like domain superfamily Alide_0789 IPR019949 Luciferase family oxidoreductase, group 1 Alide_0789 IPR011251 Luciferase-like domain Alide_0791 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0791 IPR013369 Type II secretion system GspE Alide_0791 IPR003593 AAA+ ATPase domain Alide_0791 IPR001482 Type II/IV secretion system protein Alide_0791 IPR037257 General secretory system II, protein E, N-terminal superfamily Alide_0792 IPR001775 GspD/PilQ family Alide_0792 IPR005644 NolW-like Alide_0792 IPR038591 NolW-like superfamily Alide_0792 IPR013356 Type II secretion system GspD Alide_0792 IPR004846 Type II/III secretion system Alide_0792 IPR004845 Type II secretion system GspD, conserved site Alide_0797 IPR012902 Prokaryotic N-terminal methylation site Alide_0797 IPR010055 Type II secretion system protein J Alide_0798 IPR003413 Type II secretion system protein I domain Alide_0798 IPR010052 Type II secretion system protein I Alide_0798 IPR012902 Prokaryotic N-terminal methylation site Alide_0800 IPR012902 Prokaryotic N-terminal methylation site Alide_0800 IPR013545 Type II secretion system protein G Alide_0800 IPR010054 General secretion pathway protein G Alide_0800 IPR000983 Bacterial general secretion pathway protein G-type pilin Alide_0803 IPR003805 Adenosylcobinamide-GDP ribazoletransferase Alide_0804 IPR001926 Pyridoxal-phosphate dependent enzyme Alide_0804 IPR038110 Threonine dehydratase, ACT-like domain superfamily Alide_0804 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Alide_0804 IPR001721 Threonine dehydratase, ACT-like domain Alide_0804 IPR005787 Threonine dehydratase, biosynthetic Alide_0804 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Alide_0805 IPR036102 OsmC/Ohr superfamily Alide_0805 IPR015946 K homology domain-like, alpha/beta Alide_0805 IPR003718 OsmC/Ohr family Alide_0806 IPR011566 Ubiquinone biosynthesis protein Coq7 Alide_0806 IPR012347 Ferritin-like Alide_0806 IPR009078 Ferritin-like superfamily Alide_0807 IPR002299 Porin, Neisseria sp. type Alide_0807 IPR023614 Porin domain superfamily Alide_0807 IPR033900 Porin domain, Gram-negative type Alide_0809 IPR035906 MetI-like superfamily Alide_0809 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_0810 IPR002933 Peptidase M20 Alide_0810 IPR017439 Amidohydrolase Alide_0810 IPR036264 Bacterial exopeptidase dimerisation domain Alide_0810 IPR011650 Peptidase M20, dimerisation domain Alide_0811 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Alide_0811 IPR035906 MetI-like superfamily Alide_0811 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_0812 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0812 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Alide_0812 IPR017871 ABC transporter, conserved site Alide_0812 IPR003439 ABC transporter-like Alide_0812 IPR003593 AAA+ ATPase domain Alide_0813 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0813 IPR017871 ABC transporter, conserved site Alide_0813 IPR003439 ABC transporter-like Alide_0813 IPR003593 AAA+ ATPase domain Alide_0813 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Alide_0814 IPR008914 Phosphatidylethanolamine-binding protein Alide_0814 IPR036610 PEBP-like superfamily Alide_0814 IPR005247 YbhB/YbcL Alide_0815 IPR009057 Homeobox-like domain superfamily Alide_0815 IPR001347 Sugar isomerase (SIS) Alide_0815 IPR035472 RpiR-like, SIS domain Alide_0815 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0815 IPR003836 Glucokinase Alide_0815 IPR000281 Helix-turn-helix protein RpiR Alide_0816 IPR013785 Aldolase-type TIM barrel Alide_0816 IPR018225 Transaldolase, active site Alide_0816 IPR001585 Transaldolase/Fructose-6-phosphate aldolase Alide_0816 IPR004730 Transaldolase type 1 Alide_0817 IPR001672 Phosphoglucose isomerase (PGI) Alide_0817 IPR023096 Phosphoglucose isomerase, C-terminal Alide_0817 IPR035476 Phosphoglucose isomerase, SIS domain 1 Alide_0817 IPR018189 Phosphoglucose isomerase, conserved site Alide_0817 IPR035482 Phosphoglucose isomerase, SIS domain 2 Alide_0818 IPR001844 Chaperonin Cpn60 Alide_0818 IPR002423 Chaperonin Cpn60/TCP-1 family Alide_0818 IPR027409 GroEL-like apical domain superfamily Alide_0818 IPR027413 GroEL-like equatorial domain superfamily Alide_0818 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Alide_0818 IPR018370 Chaperonin Cpn60, conserved site Alide_0819 IPR037124 GroES chaperonin superfamily Alide_0819 IPR018369 Chaperonin GroES, conserved site Alide_0819 IPR020818 GroES chaperonin family Alide_0819 IPR011032 GroES-like superfamily Alide_0820 IPR001980 Phosphopantetheine adenylyltransferase Alide_0820 IPR004821 Cytidyltransferase-like domain Alide_0820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_0821 IPR022636 S-adenosylmethionine synthetase superfamily Alide_0821 IPR022630 S-adenosylmethionine synthetase, C-terminal Alide_0821 IPR022629 S-adenosylmethionine synthetase, central domain Alide_0821 IPR022628 S-adenosylmethionine synthetase, N-terminal Alide_0821 IPR002133 S-adenosylmethionine synthetase Alide_0821 IPR022631 S-adenosylmethionine synthetase, conserved site Alide_0823 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase Alide_0823 IPR004960 Bacterial lipid A biosynthesis acyltransferase Alide_0824 IPR036390 Winged helix DNA-binding domain superfamily Alide_0824 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0824 IPR000847 Transcription regulator HTH, LysR Alide_0824 IPR005119 LysR, substrate-binding Alide_0825 IPR005064 Bordetella uptake gene Alide_0825 IPR042100 Bordetella uptake gene, domain 1 Alide_0826 IPR042100 Bordetella uptake gene, domain 1 Alide_0826 IPR005064 Bordetella uptake gene Alide_0827 IPR024084 Isopropylmalate dehydrogenase-like domain Alide_0828 IPR006680 Amidohydrolase-related Alide_0828 IPR032466 Metal-dependent hydrolase Alide_0829 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0829 IPR006073 GTP binding domain Alide_0829 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC Alide_0829 IPR030393 EngB-type guanine nucleotide-binding (G) domain Alide_0830 IPR009056 Cytochrome c-like domain Alide_0830 IPR008168 Cytochrome c, class IC Alide_0830 IPR024167 Cytochrome c4-like Alide_0830 IPR036909 Cytochrome c-like domain superfamily Alide_0831 IPR023494 Cytochrome c biogenesis protein Ccs1/CcsB Alide_0831 IPR007816 ResB-like domain Alide_0833 IPR000572 Oxidoreductase, molybdopterin-binding domain Alide_0833 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP Alide_0833 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily Alide_0833 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_0834 IPR013130 Ferric reductase transmembrane component-like domain Alide_0834 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ Alide_0836 IPR002986 Diaminopimelate decarboxylase, LysA Alide_0836 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Alide_0836 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal Alide_0836 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal Alide_0836 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Alide_0836 IPR000183 Ornithine/DAP/Arg decarboxylase Alide_0836 IPR029066 PLP-binding barrel Alide_0838 IPR002908 Frataxin/CyaY Alide_0838 IPR036524 Frataxin/CyaY superfamily Alide_0838 IPR020895 Frataxin conserved site Alide_0839 IPR031376 Penicillin-binding protein, OB-like domain Alide_0839 IPR001460 Penicillin-binding protein, transpeptidase Alide_0839 IPR023346 Lysozyme-like domain superfamily Alide_0839 IPR036950 Penicillin binding protein transglycosylase domain Alide_0839 IPR012338 Beta-lactamase/transpeptidase-like Alide_0839 IPR001264 Glycosyl transferase, family 51 Alide_0844 IPR013355 Type IV pilus secretin PilQ Alide_0844 IPR001775 GspD/PilQ family Alide_0844 IPR004845 Type II secretion system GspD, conserved site Alide_0844 IPR004846 Type II/III secretion system Alide_0844 IPR011662 Secretin/TonB, short N-terminal domain Alide_0844 IPR005644 NolW-like Alide_0844 IPR021731 AMIN domain Alide_0844 IPR038591 NolW-like superfamily Alide_0845 IPR015919 Cadherin-like superfamily Alide_0845 IPR019948 Gram-positive LPXTG cell wall anchor Alide_0845 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Alide_0845 IPR013783 Immunoglobulin-like fold Alide_0845 IPR022263 KxYKxGKxW signal peptide Alide_0845 IPR019931 LPXTG cell wall anchor domain Alide_0846 IPR030960 3-dehydroquinate synthase domain Alide_0846 IPR016037 3-dehydroquinate synthase AroB Alide_0846 IPR030963 3-dehydroquinate synthase family Alide_0847 IPR026875 Phosphohydrolase-associated domain Alide_0847 IPR003607 HD/PDEase domain Alide_0847 IPR023023 dNTP triphosphohydrolase, type 2 Alide_0847 IPR006261 dNTP triphosphohydrolase Alide_0847 IPR006674 HD domain Alide_0850 IPR016160 Aldehyde dehydrogenase, cysteine active site Alide_0850 IPR010061 Methylmalonate-semialdehyde dehydrogenase Alide_0850 IPR015590 Aldehyde dehydrogenase domain Alide_0850 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_0850 IPR016161 Aldehyde/histidinol dehydrogenase Alide_0850 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_0852 IPR005119 LysR, substrate-binding Alide_0852 IPR000847 Transcription regulator HTH, LysR Alide_0852 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0852 IPR036390 Winged helix DNA-binding domain superfamily Alide_0854 IPR002932 Glutamate synthase domain Alide_0854 IPR006982 Glutamate synthase, central-N Alide_0854 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily Alide_0854 IPR002489 Glutamate synthase, alpha subunit, C-terminal Alide_0854 IPR017932 Glutamine amidotransferase type 2 domain Alide_0854 IPR013785 Aldolase-type TIM barrel Alide_0854 IPR029055 Nucleophile aminohydrolases, N-terminal Alide_0855 IPR028261 Dihydroprymidine dehydrogenase domain II Alide_0855 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_0855 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 Alide_0855 IPR009051 Alpha-helical ferredoxin Alide_0855 IPR023753 FAD/NAD(P)-binding domain Alide_0857 IPR035906 MetI-like superfamily Alide_0857 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Alide_0857 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_0860 IPR035246 Spermidine synthase, tetramerisation domain Alide_0860 IPR037163 Spermidine synthase, tetramerisation domain superfamily Alide_0860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_0860 IPR030374 Polyamine biosynthesis domain Alide_0860 IPR001045 Spermidine/spermine synthases Alide_0861 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic Alide_0861 IPR016067 S-adenosylmethionine decarboxylase, core Alide_0861 IPR017716 S-adenosylmethionine decarboxylase proenzyme Alide_0862 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0862 IPR003439 ABC transporter-like Alide_0862 IPR017871 ABC transporter, conserved site Alide_0862 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl Alide_0862 IPR003593 AAA+ ATPase domain Alide_0863 IPR030802 ABC transporter permease MalE Alide_0863 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Alide_0864 IPR003399 Mce/MlaD Alide_0864 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD Alide_0868 IPR029787 Nucleotide cyclase Alide_0868 IPR000160 GGDEF domain Alide_0868 IPR001789 Signal transduction response regulator, receiver domain Alide_0868 IPR011006 CheY-like superfamily Alide_0869 IPR003593 AAA+ ATPase domain Alide_0869 IPR003439 ABC transporter-like Alide_0869 IPR017871 ABC transporter, conserved site Alide_0869 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0870 IPR013525 ABC-2 type transporter Alide_0870 IPR000412 ABC-2 transporter Alide_0871 IPR002634 BolA protein Alide_0871 IPR036065 BolA-like superfamily Alide_0872 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase Alide_0872 IPR001986 Enolpyruvate transferase domain Alide_0872 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Alide_0872 IPR036968 Enolpyruvate transferase domain superfamily Alide_0873 IPR001348 ATP phosphoribosyltransferase HisG Alide_0873 IPR024893 ATP phosphoribosyltransferase HisG, short form Alide_0873 IPR018198 ATP phosphoribosyltransferase, conserved site Alide_0873 IPR013820 ATP phosphoribosyltransferase, catalytic domain Alide_0874 IPR022695 Histidinol dehydrogenase, monofunctional Alide_0874 IPR001692 Histidinol dehydrogenase, conserved site Alide_0874 IPR016161 Aldehyde/histidinol dehydrogenase Alide_0874 IPR012131 Histidinol dehydrogenase Alide_0877 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_0877 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_0877 IPR005861 Histidinol-phosphate aminotransferase family Alide_0877 IPR015424 Pyridoxal phosphate-dependent transferase Alide_0877 IPR004839 Aminotransferase, class I/classII Alide_0878 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily Alide_0878 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site Alide_0878 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_0878 IPR000807 Imidazoleglycerol-phosphate dehydratase Alide_0879 IPR029062 Class I glutamine amidotransferase-like Alide_0879 IPR010139 Imidazole glycerol phosphate synthase, subunit H Alide_0879 IPR017926 Glutamine amidotransferase Alide_0880 IPR006062 Histidine biosynthesis Alide_0880 IPR013785 Aldolase-type TIM barrel Alide_0880 IPR011060 Ribulose-phosphate binding barrel Alide_0880 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Alide_0880 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA Alide_0883 IPR021520 Stealth protein CR2, conserved region 2 Alide_0883 IPR031357 Stealth protein CR3, conserved region 3 Alide_0883 IPR001296 Glycosyl transferase, family 1 Alide_0883 IPR031358 Stealth protein CR1, conserved region 1 Alide_0883 IPR031356 Stealth protein CR4, conserved region 4 Alide_0889 IPR016040 NAD(P)-binding domain Alide_0889 IPR005886 UDP-glucose 4-epimerase Alide_0889 IPR036291 NAD(P)-binding domain superfamily Alide_0890 IPR013785 Aldolase-type TIM barrel Alide_0890 IPR011060 Ribulose-phosphate binding barrel Alide_0890 IPR004651 Histidine biosynthesis, HisF Alide_0890 IPR006062 Histidine biosynthesis Alide_0891 IPR026660 Phosphoribosyl-AMP cyclohydrolase Alide_0891 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily Alide_0891 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain Alide_0892 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase Alide_0892 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like Alide_0895 IPR011146 HIT-like domain Alide_0895 IPR001310 Histidine triad (HIT) protein Alide_0895 IPR019808 Histidine triad, conserved site Alide_0895 IPR036265 HIT-like superfamily Alide_0896 IPR003369 Sec-independent protein translocase protein TatA/B/E Alide_0896 IPR006312 Sec-independent protein translocase protein TatA/E Alide_0897 IPR003369 Sec-independent protein translocase protein TatA/B/E Alide_0897 IPR018448 Twin-arginine translocation protein TatB Alide_0898 IPR019820 Sec-independent periplasmic protein translocase, conserved site Alide_0898 IPR002033 Sec-independent periplasmic protein translocase TatC Alide_0899 IPR001940 Peptidase S1C Alide_0899 IPR009003 Peptidase S1, PA clan Alide_0899 IPR011782 Peptidase S1C, Do Alide_0899 IPR001478 PDZ domain Alide_0899 IPR036034 PDZ superfamily Alide_0899 IPR041489 PDZ domain 6 Alide_0900 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Alide_0900 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Alide_0901 IPR005255 PdxA family Alide_0902 IPR036019 Gated mechanosensitive channel Alide_0902 IPR019823 Large-conductance mechanosensitive channel, conserved site Alide_0902 IPR001185 Large-conductance mechanosensitive channel Alide_0902 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L Alide_0903 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit Alide_0903 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Alide_0903 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal Alide_0903 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily Alide_0903 IPR014349 Rieske iron-sulphur protein Alide_0903 IPR005805 Rieske iron-sulphur protein, C-terminal Alide_0904 IPR016174 Di-haem cytochrome, transmembrane Alide_0904 IPR005798 Cytochrome b/b6, C-terminal Alide_0904 IPR036150 Cytochrome b/b6, C-terminal domain superfamily Alide_0904 IPR030689 Cytochrome b Alide_0904 IPR027387 Cytochrome b/b6-like domain superfamily Alide_0904 IPR005797 Cytochrome b/b6, N-terminal Alide_0905 IPR036909 Cytochrome c-like domain superfamily Alide_0905 IPR009056 Cytochrome c-like domain Alide_0905 IPR002326 Cytochrome c1 Alide_0906 IPR036249 Thioredoxin-like superfamily Alide_0906 IPR010987 Glutathione S-transferase, C-terminal-like Alide_0906 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Alide_0906 IPR034341 Stringent starvation protein A, N-terminal Alide_0906 IPR040079 Glutathione Transferase family Alide_0906 IPR004046 Glutathione S-transferase, C-terminal Alide_0906 IPR004045 Glutathione S-transferase, N-terminal Alide_0907 IPR036760 SspB-like superfamily Alide_0907 IPR007481 Stringent starvation protein B Alide_0909 IPR000185 Protein translocase subunit SecA Alide_0909 IPR011130 SecA, preprotein cross-linking domain Alide_0909 IPR014018 SecA motor DEAD Alide_0909 IPR011115 SecA DEAD-like, N-terminal Alide_0909 IPR020937 SecA conserved site Alide_0909 IPR036670 SecA, preprotein cross-linking domain superfamily Alide_0909 IPR036266 SecA, Wing/Scaffold superfamily Alide_0909 IPR011116 SecA Wing/Scaffold Alide_0909 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0909 IPR004027 SEC-C motif Alide_0912 IPR000086 NUDIX hydrolase domain Alide_0912 IPR020084 NUDIX hydrolase, conserved site Alide_0912 IPR020476 NUDIX hydrolase Alide_0912 IPR003561 Mutator MutT Alide_0912 IPR015797 NUDIX hydrolase-like domain superfamily Alide_0913 IPR005584 DNA gyrase inhibitor YacG Alide_0913 IPR013088 Zinc finger, NHR/GATA-type Alide_0914 IPR036268 ZapD domain superfamily Alide_0914 IPR027462 Z ring-associated protein D, C-terminal Alide_0914 IPR009777 Cell division protein ZapD Alide_0915 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0915 IPR001977 Dephospho-CoA kinase Alide_0916 IPR000045 Prepilin type IV endopeptidase, peptidase domain Alide_0916 IPR014032 Peptidase A24A, prepilin type IV, bacterial Alide_0916 IPR010627 Peptidase A24A, N-terminal Alide_0917 IPR018076 Type II secretion system F domain Alide_0917 IPR042094 Type II secretion system F domain superfamily Alide_0917 IPR003004 GspF/PilC family Alide_0917 IPR001992 Type II secretion system conserved site Alide_0918 IPR007831 General secretory system II, protein E, N-terminal Alide_0918 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0918 IPR013374 ATPase, type IV, pilus assembly, PilB Alide_0918 IPR001482 Type II/IV secretion system protein Alide_0918 IPR037257 General secretory system II, protein E, N-terminal superfamily Alide_0918 IPR042181 Type II secretion system, protein E, N-terminal Alide_0921 IPR036397 Ribonuclease H superfamily Alide_0921 IPR012337 Ribonuclease H-like superfamily Alide_0921 IPR001584 Integrase, catalytic core Alide_0921 IPR025948 HTH-like domain Alide_0922 IPR002514 Transposase IS3/IS911family Alide_0922 IPR009057 Homeobox-like domain superfamily Alide_0922 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0924 IPR013762 Integrase-like, catalytic domain superfamily Alide_0924 IPR002104 Integrase, catalytic domain Alide_0924 IPR010998 Integrase/recombinase, N-terminal Alide_0924 IPR011010 DNA breaking-rejoining enzyme, catalytic core Alide_0925 IPR000092 Polyprenyl synthetase Alide_0925 IPR033749 Polyprenyl synthetase, conserved site Alide_0925 IPR008949 Isoprenoid synthase domain superfamily Alide_0926 IPR028909 Ribosomal protein L21-like Alide_0926 IPR018258 Ribosomal protein L21, conserved site Alide_0926 IPR001787 Ribosomal protein L21 Alide_0926 IPR036164 L21-like superfamily Alide_0927 IPR018261 Ribosomal protein L27, conserved site Alide_0927 IPR001684 Ribosomal protein L27 Alide_0928 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0928 IPR006169 GTP1/OBG domain Alide_0928 IPR006074 GTP1/OBG, conserved site Alide_0928 IPR014100 GTP-binding protein Obg/CgtA Alide_0928 IPR035101 GTP-binding protein, Obg-type Alide_0928 IPR031167 OBG-type guanine nucleotide-binding (G) domain Alide_0928 IPR006073 GTP binding domain Alide_0928 IPR036726 GTP1/OBG domain superfamily Alide_0929 IPR015947 PUA-like superfamily Alide_0929 IPR041739 Glutamate-5-kinase domain Alide_0929 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase Alide_0929 IPR002478 PUA domain Alide_0929 IPR036974 PUA domain superfamily Alide_0929 IPR036393 Acetylglutamate kinase-like superfamily Alide_0929 IPR001048 Aspartate/glutamate/uridylate kinase Alide_0929 IPR019797 Glutamate 5-kinase, conserved site Alide_0929 IPR011529 Glutamate 5-kinase Alide_0929 IPR001057 Glutamate/acetylglutamate kinase Alide_0930 IPR015797 NUDIX hydrolase-like domain superfamily Alide_0930 IPR020084 NUDIX hydrolase, conserved site Alide_0930 IPR000086 NUDIX hydrolase domain Alide_0930 IPR022927 RNA pyrophosphohydrolase RppH Alide_0930 IPR020476 NUDIX hydrolase Alide_0931 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Alide_0931 IPR033730 Prokaryote proline-tRNA ligase core domain Alide_0931 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 Alide_0931 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type Alide_0931 IPR002316 Proline-tRNA ligase, class IIa Alide_0931 IPR036621 Anticodon-binding domain superfamily Alide_0931 IPR004154 Anticodon-binding Alide_0931 IPR006195 Aminoacyl-tRNA synthetase, class II Alide_0931 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Alide_0931 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily Alide_0932 IPR000189 Prokaryotic transglycosylase, active site Alide_0932 IPR008258 Transglycosylase SLT domain 1 Alide_0932 IPR023346 Lysozyme-like domain superfamily Alide_0932 IPR023664 Murein transglycosylase-C Alide_0932 IPR024570 Murein transglycosylase-C, N-terminal Alide_0933 IPR000644 CBS domain Alide_0933 IPR002550 CNNM, transmembrane domain Alide_0933 IPR016169 FAD-binding, type PCMH, subdomain 2 Alide_0933 IPR005170 Transporter-associated domain Alide_0933 IPR036318 FAD-binding, type PCMH-like superfamily Alide_0934 IPR003111 Lon, substrate-binding domain Alide_0934 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0934 IPR008268 Peptidase S16, active site Alide_0934 IPR015947 PUA-like superfamily Alide_0934 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_0934 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Alide_0934 IPR003959 ATPase, AAA-type, core Alide_0934 IPR027065 Lon protease Alide_0934 IPR027543 Lon protease, bacterial Alide_0934 IPR003593 AAA+ ATPase domain Alide_0934 IPR004815 Lon protease, bacterial/eukaryotic-type Alide_0934 IPR008269 Peptidase S16, Lon proteolytic domain Alide_0935 IPR036249 Thioredoxin-like superfamily Alide_0935 IPR004480 Monothiol glutaredoxin-related Alide_0935 IPR014434 Monothiol glutaredoxin Alide_0935 IPR033658 Glutaredoxin, PICOT-like Alide_0935 IPR002109 Glutaredoxin Alide_0936 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_0936 IPR040758 Release factor glutamine methyltransferase, N-terminal domain Alide_0936 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific Alide_0936 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Alide_0936 IPR004556 Methyltransferase HemK-like Alide_0936 IPR007848 Methyltransferase small domain Alide_0937 IPR005139 Peptide chain release factor Alide_0937 IPR000352 Peptide chain release factor class I Alide_0937 IPR004373 Peptide chain release factor 1 Alide_0938 IPR018214 Glutamyl-tRNA reductase, conserved site Alide_0938 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal Alide_0938 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain Alide_0938 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase Alide_0938 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily Alide_0938 IPR036291 NAD(P)-binding domain superfamily Alide_0938 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily Alide_0938 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Alide_0940 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 Alide_0940 IPR000847 Transcription regulator HTH, LysR Alide_0940 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0940 IPR036390 Winged helix DNA-binding domain superfamily Alide_0940 IPR005119 LysR, substrate-binding Alide_0941 IPR005064 Bordetella uptake gene Alide_0941 IPR042100 Bordetella uptake gene, domain 1 Alide_0941 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_0943 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 Alide_0943 IPR024393 Mechanosensitive ion channel MscS, porin domain Alide_0943 IPR025692 Mechanosensitive ion channel inner membrane domain 1 Alide_0943 IPR023408 Mechanosensitive ion channel MscS domain superfamily Alide_0943 IPR006686 Mechanosensitive ion channel MscS, conserved site Alide_0943 IPR011066 Mechanosensitive ion channel MscS, C-terminal Alide_0943 IPR006685 Mechanosensitive ion channel MscS Alide_0943 IPR010920 LSM domain superfamily Alide_0944 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily Alide_0944 IPR030395 Glycerophosphodiester phosphodiesterase domain Alide_0945 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0945 IPR003439 ABC transporter-like Alide_0945 IPR017871 ABC transporter, conserved site Alide_0945 IPR008995 Molybdate/tungstate binding, C-terminal Alide_0945 IPR040582 MalK, OB fold domain Alide_0945 IPR003593 AAA+ ATPase domain Alide_0945 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC Alide_0946 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE Alide_0946 IPR035906 MetI-like superfamily Alide_0946 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_0947 IPR035906 MetI-like superfamily Alide_0947 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_0948 IPR006059 Bacterial extracellular solute-binding protein Alide_0949 IPR036291 NAD(P)-binding domain superfamily Alide_0949 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Alide_0949 IPR002912 ACT domain Alide_0949 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Alide_0949 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Alide_0949 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Alide_0953 IPR023576 UbiE/COQ5 methyltransferase, conserved site Alide_0953 IPR004033 UbiE/COQ5 methyltransferase Alide_0953 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_0956 IPR010232 Probable protein kinase UbiB Alide_0956 IPR011009 Protein kinase-like domain superfamily Alide_0956 IPR004147 UbiB domain Alide_0960 IPR029351 GAD domain Alide_0960 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Alide_0960 IPR006195 Aminoacyl-tRNA synthetase, class II Alide_0960 IPR004524 Aspartate-tRNA ligase, type 1 Alide_0960 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb Alide_0960 IPR012340 Nucleic acid-binding, OB-fold Alide_0960 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Alide_0960 IPR004115 GAD-like domain superfamily Alide_0963 IPR001736 Phospholipase D/Transphosphatidylase Alide_0963 IPR025202 Phospholipase D-like domain Alide_0963 IPR030872 Cardiolipin synthase B Alide_0964 IPR001474 GTP cyclohydrolase I Alide_0964 IPR020602 GTP cyclohydrolase I domain Alide_0964 IPR018234 GTP cyclohydrolase I, conserved site Alide_0967 IPR005467 Histidine kinase domain Alide_0967 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_0967 IPR013767 PAS fold Alide_0967 IPR035965 PAS domain superfamily Alide_0967 IPR000700 PAS-associated, C-terminal Alide_0967 IPR003594 Histidine kinase/HSP90-like ATPase Alide_0967 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_0967 IPR000014 PAS domain Alide_0967 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_0967 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_0968 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0968 IPR011006 CheY-like superfamily Alide_0968 IPR016032 Signal transduction response regulator, C-terminal effector Alide_0968 IPR001789 Signal transduction response regulator, receiver domain Alide_0968 IPR000792 Transcription regulator LuxR, C-terminal Alide_0969 IPR009056 Cytochrome c-like domain Alide_0969 IPR036909 Cytochrome c-like domain superfamily Alide_0972 IPR001123 Amino acid exporter protein, LeuE-type Alide_0973 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit Alide_0973 IPR000120 Amidase Alide_0973 IPR023631 Amidase signature domain Alide_0973 IPR036928 Amidase signature (AS) superfamily Alide_0973 IPR020556 Amidase, conserved site Alide_0974 IPR030678 Peptide/nickel binding protein, MppA-type Alide_0974 IPR039424 Solute-binding protein family 5 Alide_0974 IPR023765 Solute-binding protein family 5, conserved site Alide_0974 IPR000914 Solute-binding protein family 5 domain Alide_0975 IPR003439 ABC transporter-like Alide_0975 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0975 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Alide_0975 IPR017871 ABC transporter, conserved site Alide_0975 IPR003593 AAA+ ATPase domain Alide_0976 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0976 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Alide_0976 IPR017871 ABC transporter, conserved site Alide_0976 IPR003439 ABC transporter-like Alide_0976 IPR003593 AAA+ ATPase domain Alide_0977 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Alide_0977 IPR035906 MetI-like superfamily Alide_0977 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_0978 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_0978 IPR035906 MetI-like superfamily Alide_0979 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_0979 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Alide_0980 IPR036416 Peptidyl-tRNA hydrolase superfamily Alide_0980 IPR018171 Peptidyl-tRNA hydrolase, conserved site Alide_0980 IPR001328 Peptidyl-tRNA hydrolase Alide_0981 IPR001021 Ribosomal protein L25, long-form Alide_0981 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily Alide_0981 IPR020057 Ribosomal protein L25, beta domain Alide_0981 IPR029751 Ribosomal protein L25 Alide_0981 IPR037121 Ribosomal protein L25, C-terminal Alide_0981 IPR020055 Ribosomal protein L25, short-form Alide_0981 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Alide_0982 IPR029057 Phosphoribosyltransferase-like Alide_0982 IPR005946 Ribose-phosphate pyrophosphokinase Alide_0982 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type Alide_0982 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site Alide_0982 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain Alide_0982 IPR000836 Phosphoribosyltransferase domain Alide_0983 IPR013750 GHMP kinase, C-terminal domain Alide_0983 IPR036554 GHMP kinase, C-terminal domain superfamily Alide_0983 IPR006204 GHMP kinase N-terminal domain Alide_0983 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Alide_0983 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_0983 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Alide_0985 IPR019734 Tetratricopeptide repeat Alide_0985 IPR011990 Tetratricopeptide-like helical domain superfamily Alide_0985 IPR013026 Tetratricopeptide repeat-containing domain Alide_0986 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain Alide_0986 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site Alide_0986 IPR020629 Formamidopyrimidine-DNA glycosylase Alide_0986 IPR035937 MutM-like, N-terminal Alide_0986 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type Alide_0986 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding Alide_0986 IPR010663 Zinc finger, FPG/IleRS-type Alide_0986 IPR010979 Ribosomal protein S13-like, H2TH Alide_0988 IPR029119 MutY, C-terminal Alide_0988 IPR004036 Endonuclease III-like, conserved site-2 Alide_0988 IPR015797 NUDIX hydrolase-like domain superfamily Alide_0988 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif Alide_0988 IPR004035 Endonuclease III, iron-sulphur binding site Alide_0988 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Alide_0988 IPR005760 A/G-specific adenine glycosylase MutY Alide_0988 IPR011257 DNA glycosylase Alide_0988 IPR003265 HhH-GPD domain Alide_0988 IPR000445 Helix-hairpin-helix motif Alide_0989 IPR005337 RapZ-like family Alide_0989 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0990 IPR004604 DNA recombination/repair protein RecN Alide_0990 IPR003395 RecF/RecN/SMC, N-terminal Alide_0990 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0991 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Alide_0991 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal Alide_0991 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal Alide_0991 IPR002504 NAD kinase Alide_0992 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain Alide_0992 IPR036390 Winged helix DNA-binding domain superfamily Alide_0992 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Alide_0992 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal Alide_0992 IPR029016 GAF-like domain superfamily Alide_0992 IPR002571 Heat-inducible transcription repressor HrcA Alide_0992 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_0993 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Alide_0993 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Alide_0994 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Alide_0994 IPR036291 NAD(P)-binding domain superfamily Alide_0994 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Alide_0994 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Alide_0994 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Alide_0997 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Alide_0997 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_0997 IPR035906 MetI-like superfamily Alide_0998 IPR035906 MetI-like superfamily Alide_0998 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_0998 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Alide_0999 IPR003593 AAA+ ATPase domain Alide_0999 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type Alide_0999 IPR017871 ABC transporter, conserved site Alide_0999 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_0999 IPR003439 ABC transporter-like Alide_1000 IPR018313 Solute-binding protein family 3, conserved site Alide_1000 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Alide_1001 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter Alide_1001 IPR001320 Ionotropic glutamate receptor Alide_1001 IPR018313 Solute-binding protein family 3, conserved site Alide_1001 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Alide_1004 IPR029000 Cyclophilin-like domain superfamily Alide_1004 IPR003833 Carboxyltransferase domain, subdomain C and D Alide_1004 IPR010016 KipI family Alide_1005 IPR003778 Carboxyltransferase domain, subdomain A and B Alide_1005 IPR029000 Cyclophilin-like domain superfamily Alide_1006 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Alide_1006 IPR005501 LamB/YcsF/PxpA-like Alide_1008 IPR011761 ATP-grasp fold Alide_1008 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase Alide_1008 IPR005482 Biotin carboxylase, C-terminal Alide_1008 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Alide_1008 IPR013815 ATP-grasp fold, subdomain 1 Alide_1008 IPR016185 Pre-ATP-grasp domain superfamily Alide_1008 IPR005481 Biotin carboxylase-like, N-terminal domain Alide_1008 IPR011764 Biotin carboxylation domain Alide_1008 IPR011054 Rudiment single hybrid motif Alide_1011 IPR006638 Elp3/MiaB/NifB Alide_1011 IPR010723 HemN, C-terminal Alide_1011 IPR034505 Anaerobic coproporphyrinogen-III oxidase Alide_1011 IPR007197 Radical SAM Alide_1011 IPR004559 Heme chaperone HemW-like Alide_1011 IPR023404 Radical SAM, alpha/beta horseshoe Alide_1012 IPR020922 dITP/XTP pyrophosphatase Alide_1012 IPR002637 Ham1-like protein Alide_1012 IPR029001 Inosine triphosphate pyrophosphatase-like Alide_1013 IPR001247 Exoribonuclease, phosphorolytic domain 1 Alide_1013 IPR036345 Exoribonuclease, PH domain 2 superfamily Alide_1013 IPR027408 PNPase/RNase PH domain superfamily Alide_1013 IPR015847 Exoribonuclease, phosphorolytic domain 2 Alide_1013 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_1013 IPR002381 Ribonuclease PH, bacterial-type Alide_1013 IPR018336 Ribonuclease PH, conserved site Alide_1015 IPR005543 PASTA domain Alide_1015 IPR000719 Protein kinase domain Alide_1015 IPR008271 Serine/threonine-protein kinase, active site Alide_1015 IPR011009 Protein kinase-like domain superfamily Alide_1015 IPR017441 Protein kinase, ATP binding site Alide_1016 IPR013551 Domain of unknown function DUF1732 Alide_1016 IPR013527 YicC-like, N-terminal Alide_1016 IPR005229 Conserved hypothetical protein CHP00255 Alide_1030 IPR032501 Proteasomal ATPase OB C-terminal domain Alide_1030 IPR041626 Proteasomal ATPase, N-terminal OB domain Alide_1030 IPR003593 AAA+ ATPase domain Alide_1030 IPR003959 ATPase, AAA-type, core Alide_1030 IPR003960 ATPase, AAA-type, conserved site Alide_1030 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1030 IPR022482 Proteasome ATPase Alide_1036 IPR008144 Guanylate kinase-like domain Alide_1036 IPR017665 Guanylate kinase Alide_1036 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Alide_1036 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1036 IPR020590 Guanylate kinase, conserved site Alide_1037 IPR012293 RNA polymerase subunit, RPB6/omega Alide_1037 IPR006110 RNA polymerase, subunit omega/K/RPB6 Alide_1037 IPR036161 RPB6/omega subunit-like superfamily Alide_1037 IPR003716 DNA-directed RNA polymerase, omega subunit Alide_1038 IPR004095 TGS Alide_1038 IPR012676 TGS-like Alide_1038 IPR004811 RelA/SpoT family Alide_1038 IPR012675 Beta-grasp domain superfamily Alide_1038 IPR007685 RelA/SpoT Alide_1038 IPR003607 HD/PDEase domain Alide_1038 IPR033655 RelA, TGS domain Alide_1038 IPR002912 ACT domain Alide_1039 IPR006358 Transcription elongation factor GreB Alide_1039 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily Alide_1039 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal Alide_1039 IPR023459 Transcription elongation factor GreA/GreB family Alide_1039 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal Alide_1039 IPR028624 Transcription elongation factor GreA/GreB Alide_1039 IPR018151 Transcription elongation factor, GreA/GreB, conserved site Alide_1039 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily Alide_1041 IPR009068 S15/NS1, RNA-binding Alide_1041 IPR005290 Ribosomal protein S15, bacterial-type Alide_1041 IPR000589 Ribosomal protein S15 Alide_1042 IPR036345 Exoribonuclease, PH domain 2 superfamily Alide_1042 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain Alide_1042 IPR027408 PNPase/RNase PH domain superfamily Alide_1042 IPR004088 K Homology domain, type 1 Alide_1042 IPR012340 Nucleic acid-binding, OB-fold Alide_1042 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_1042 IPR036612 K Homology domain, type 1 superfamily Alide_1042 IPR001247 Exoribonuclease, phosphorolytic domain 1 Alide_1042 IPR015847 Exoribonuclease, phosphorolytic domain 2 Alide_1042 IPR022967 RNA-binding domain, S1 Alide_1042 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily Alide_1042 IPR012162 Polyribonucleotide nucleotidyltransferase Alide_1042 IPR004087 K Homology domain Alide_1042 IPR003029 S1 domain Alide_1043 IPR014030 Beta-ketoacyl synthase, N-terminal Alide_1043 IPR036736 ACP-like superfamily Alide_1043 IPR014043 Acyl transferase Alide_1043 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Alide_1043 IPR013154 Alcohol dehydrogenase, N-terminal Alide_1043 IPR016039 Thiolase-like Alide_1043 IPR006162 Phosphopantetheine attachment site Alide_1043 IPR011032 GroES-like superfamily Alide_1043 IPR018201 Beta-ketoacyl synthase, active site Alide_1043 IPR009081 Phosphopantetheine binding ACP domain Alide_1043 IPR014031 Beta-ketoacyl synthase, C-terminal Alide_1043 IPR013968 Polyketide synthase, ketoreductase domain Alide_1043 IPR020843 Polyketide synthase, enoylreductase domain Alide_1043 IPR042104 Polyketide synthase, dehydratase domain superfamily Alide_1043 IPR020807 Polyketide synthase, dehydratase domain Alide_1043 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Alide_1043 IPR032821 Ketoacyl-synthetase, C-terminal extension Alide_1043 IPR036291 NAD(P)-binding domain superfamily Alide_1043 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Alide_1043 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Alide_1044 IPR000652 Triosephosphate isomerase Alide_1044 IPR013785 Aldolase-type TIM barrel Alide_1044 IPR035990 Triosephosphate isomerase superfamily Alide_1044 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic Alide_1044 IPR020861 Triosephosphate isomerase, active site Alide_1045 IPR004692 Preprotein translocase SecG subunit Alide_1046 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid Alide_1046 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 Alide_1046 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Alide_1047 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Alide_1047 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit Alide_1048 IPR010218 NADH dehydrogenase, subunit C Alide_1048 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit Alide_1048 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Alide_1048 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site Alide_1049 IPR001135 NADH-quinone oxidoreductase, subunit D Alide_1049 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Alide_1049 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site Alide_1049 IPR029014 [NiFe]-hydrogenase, large subunit Alide_1049 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H Alide_1051 IPR011537 NADH ubiquinone oxidoreductase, F subunit Alide_1051 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Alide_1051 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Alide_1051 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain Alide_1051 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Alide_1051 IPR019554 Soluble ligand binding domain Alide_1051 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site Alide_1052 IPR036010 2Fe-2S ferredoxin-like superfamily Alide_1052 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Alide_1052 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal Alide_1052 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding Alide_1052 IPR010228 NADH:ubiquinone oxidoreductase, subunit G Alide_1052 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site Alide_1052 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Alide_1052 IPR006656 Molybdopterin oxidoreductase Alide_1053 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H Alide_1053 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site Alide_1054 IPR010226 NADH-quinone oxidoreductase, chain I Alide_1054 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Alide_1054 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_1055 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 Alide_1055 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ Alide_1056 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Alide_1056 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K Alide_1057 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Alide_1057 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 Alide_1057 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup Alide_1057 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Alide_1058 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal Alide_1058 IPR003918 NADH:ubiquinone oxidoreductase Alide_1058 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Alide_1058 IPR010227 NADH-quinone oxidoreductase, chain M/4 Alide_1059 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Alide_1059 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 Alide_1063 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain Alide_1063 IPR033524 Leu/Phe/Val dehydrogenases active site Alide_1063 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase Alide_1063 IPR014362 Glutamate dehydrogenase Alide_1063 IPR036291 NAD(P)-binding domain superfamily Alide_1063 IPR033922 NAD(P) binding domain of glutamate dehydrogenase Alide_1063 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal Alide_1064 IPR042120 MutL, C-terminal domain, dimerisation subdomain Alide_1064 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_1064 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms Alide_1064 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Alide_1064 IPR020667 DNA mismatch repair protein, MutL Alide_1064 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_1064 IPR014790 MutL, C-terminal, dimerisation Alide_1064 IPR037198 MutL, C-terminal domain superfamily Alide_1064 IPR002099 DNA mismatch repair protein family, N-terminal Alide_1064 IPR013507 DNA mismatch repair protein, S5 domain 2-like Alide_1064 IPR014762 DNA mismatch repair, conserved site Alide_1064 IPR042121 MutL, C-terminal domain, regulatory subdomain Alide_1066 IPR032818 DedA family Alide_1066 IPR032816 SNARE associated Golgi protein Alide_1067 IPR011059 Metal-dependent hydrolase, composite domain superfamily Alide_1067 IPR032466 Metal-dependent hydrolase Alide_1067 IPR006680 Amidohydrolase-related Alide_1067 IPR014311 Guanine deaminase Alide_1068 IPR026033 Azaguanine-like transporters Alide_1068 IPR006043 Xanthine/uracil/vitamin C permease Alide_1069 IPR036390 Winged helix DNA-binding domain superfamily Alide_1069 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1069 IPR005119 LysR, substrate-binding Alide_1069 IPR000847 Transcription regulator HTH, LysR Alide_1070 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Alide_1070 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily Alide_1070 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Alide_1070 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding Alide_1071 IPR005107 CO dehydrogenase flavoprotein, C-terminal Alide_1071 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Alide_1071 IPR002346 Molybdopterin dehydrogenase, FAD-binding Alide_1071 IPR036318 FAD-binding, type PCMH-like superfamily Alide_1071 IPR016166 FAD-binding domain, PCMH-type Alide_1071 IPR016169 FAD-binding, type PCMH, subdomain 2 Alide_1073 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain Alide_1073 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_1073 IPR021731 AMIN domain Alide_1074 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1074 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE Alide_1077 IPR042100 Bordetella uptake gene, domain 1 Alide_1077 IPR005064 Bordetella uptake gene Alide_1078 IPR013762 Integrase-like, catalytic domain superfamily Alide_1078 IPR010998 Integrase/recombinase, N-terminal Alide_1078 IPR002104 Integrase, catalytic domain Alide_1078 IPR011932 Tyrosine recombinase XerD Alide_1078 IPR004107 Integrase, SAM-like, N-terminal Alide_1078 IPR011010 DNA breaking-rejoining enzyme, catalytic core Alide_1078 IPR023009 Tyrosine recombinase XerC/XerD Alide_1079 IPR013655 PAS fold-3 Alide_1079 IPR035965 PAS domain superfamily Alide_1079 IPR000014 PAS domain Alide_1079 IPR001610 PAC motif Alide_1079 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Alide_1079 IPR003660 HAMP domain Alide_1079 IPR004090 Chemotaxis methyl-accepting receptor Alide_1080 IPR005064 Bordetella uptake gene Alide_1080 IPR042100 Bordetella uptake gene, domain 1 Alide_1081 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Alide_1081 IPR001633 EAL domain Alide_1081 IPR035919 EAL domain superfamily Alide_1081 IPR013976 Metal-dependent hydrolase HDOD Alide_1082 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Alide_1082 IPR035919 EAL domain superfamily Alide_1082 IPR013976 Metal-dependent hydrolase HDOD Alide_1082 IPR001633 EAL domain Alide_1083 IPR011197 Uncharacterised conserved protein UCP012318 Alide_1083 IPR007402 Protein of unknown function DUF455 Alide_1083 IPR009078 Ferritin-like superfamily Alide_1084 IPR001451 Hexapeptide repeat Alide_1084 IPR011004 Trimeric LpxA-like superfamily Alide_1085 IPR016154 Heat shock protein Hsp33, C-terminal Alide_1085 IPR000397 Heat shock protein Hsp33 Alide_1085 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily Alide_1085 IPR016153 Heat shock protein Hsp33, N-terminal Alide_1086 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter Alide_1086 IPR018313 Solute-binding protein family 3, conserved site Alide_1086 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Alide_1087 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Alide_1087 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_1087 IPR030199 Histidine transport system permease protein HisQ Alide_1087 IPR035906 MetI-like superfamily Alide_1088 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Alide_1088 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_1088 IPR035906 MetI-like superfamily Alide_1089 IPR003439 ABC transporter-like Alide_1089 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1089 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type Alide_1089 IPR003593 AAA+ ATPase domain Alide_1089 IPR017871 ABC transporter, conserved site Alide_1090 IPR007060 Septum formation initiator FtsL/DivIC Alide_1090 IPR023081 Cell division protein FtsB Alide_1091 IPR029017 Enolase-like, N-terminal Alide_1091 IPR036849 Enolase-like, C-terminal domain superfamily Alide_1091 IPR000941 Enolase Alide_1091 IPR020810 Enolase, C-terminal TIM barrel domain Alide_1091 IPR020809 Enolase, conserved site Alide_1091 IPR020811 Enolase, N-terminal Alide_1093 IPR006269 3-deoxy-8-phosphooctulonate synthase Alide_1093 IPR006218 DAHP synthetase I/KDSA Alide_1093 IPR013785 Aldolase-type TIM barrel Alide_1094 IPR017926 Glutamine amidotransferase Alide_1094 IPR029062 Class I glutamine amidotransferase-like Alide_1094 IPR033828 CTP synthase GATase domain Alide_1094 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1094 IPR017456 CTP synthase, N-terminal Alide_1094 IPR004468 CTP synthase Alide_1095 IPR035929 CoaB-like superfamily Alide_1095 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC Alide_1095 IPR036551 Flavin prenyltransferase-like Alide_1095 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal Alide_1095 IPR003382 Flavoprotein Alide_1097 IPR029054 dUTPase-like Alide_1097 IPR033704 dUTPase, trimeric Alide_1097 IPR036157 dUTPase-like superfamily Alide_1097 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase Alide_1098 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Alide_1099 IPR039994 JmjC domain-containing Alide_1099 IPR003347 JmjC domain Alide_1101 IPR014524 Outer membrane protein assembly factor BamC Alide_1101 IPR010653 NlpB/DapX lipoprotein Alide_1101 IPR042268 Outer membrane protein assembly factor BamC, C-terminal Alide_1102 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA Alide_1102 IPR013785 Aldolase-type TIM barrel Alide_1102 IPR002220 DapA-like Alide_1102 IPR020625 Schiff base-forming aldolase, active site Alide_1106 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Alide_1106 IPR001241 DNA topoisomerase, type IIA Alide_1106 IPR002288 DNA gyrase B subunit, C-terminal Alide_1106 IPR003594 Histidine kinase/HSP90-like ATPase Alide_1106 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_1106 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 Alide_1106 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_1106 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative Alide_1106 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Alide_1106 IPR006171 TOPRIM domain Alide_1106 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal Alide_1106 IPR018522 DNA topoisomerase, type IIA, conserved site Alide_1107 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative Alide_1107 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily Alide_1107 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Alide_1107 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta Alide_1107 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Alide_1107 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal Alide_1109 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Alide_1109 IPR001279 Metallo-beta-lactamase Alide_1109 IPR035681 ComA-like, MBL domain Alide_1109 IPR004797 Competence protein ComEC/Rec2 Alide_1109 IPR004477 ComEC/Rec2-related protein Alide_1110 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_1110 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_1110 IPR015590 Aldehyde dehydrogenase domain Alide_1110 IPR016161 Aldehyde/histidinol dehydrogenase Alide_1111 IPR036873 Rhodanese-like domain superfamily Alide_1111 IPR001763 Rhodanese-like domain Alide_1114 IPR003761 Exonuclease VII, small subunit Alide_1114 IPR037004 Exonuclease VII, small subunit superfamily Alide_1115 IPR000092 Polyprenyl synthetase Alide_1115 IPR008949 Isoprenoid synthase domain superfamily Alide_1115 IPR033749 Polyprenyl synthetase, conserved site Alide_1116 IPR005477 Deoxyxylulose-5-phosphate synthase Alide_1116 IPR033248 Transketolase, C-terminal domain Alide_1116 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Alide_1116 IPR005475 Transketolase-like, pyrimidine-binding domain Alide_1116 IPR020826 Transketolase binding site Alide_1116 IPR005474 Transketolase, N-terminal Alide_1116 IPR029061 Thiamin diphosphate-binding fold Alide_1117 IPR038404 TRAP transporter solute receptor DctP superfamily Alide_1117 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_1117 IPR018389 TRAP transporter solute receptor DctP/TeaA Alide_1117 IPR026289 Solute binding protein, TakP-like Alide_1117 IPR041722 Alpha-keto acid binding periplasmic protein Alide_1118 IPR013701 DEAD/H associated Alide_1118 IPR003593 AAA+ ATPase domain Alide_1118 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1118 IPR001650 Helicase, C-terminal Alide_1118 IPR014001 Helicase superfamily 1/2, ATP-binding domain Alide_1118 IPR011545 DEAD/DEAH box helicase domain Alide_1119 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Alide_1119 IPR004681 TRAP transporter large membrane protein DctM Alide_1121 IPR000760 Inositol monophosphatase-like Alide_1121 IPR022337 Inositol monophosphatase, SuhB Alide_1121 IPR020550 Inositol monophosphatase, conserved site Alide_1121 IPR020583 Inositol monophosphatase, metal-binding site Alide_1121 IPR033942 Inositol monophosphatase Alide_1122 IPR029028 Alpha/beta knot methyltransferases Alide_1122 IPR004384 RNA methyltransferase TrmJ/LasT Alide_1122 IPR001537 tRNA/rRNA methyltransferase, SpoU type Alide_1122 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Alide_1123 IPR042122 Serine acetyltransferase, N-terminal domain superfamily Alide_1123 IPR018357 Hexapeptide transferase, conserved site Alide_1123 IPR001451 Hexapeptide repeat Alide_1123 IPR011004 Trimeric LpxA-like superfamily Alide_1123 IPR005881 Serine O-acetyltransferase Alide_1125 IPR036291 NAD(P)-binding domain superfamily Alide_1125 IPR013149 Alcohol dehydrogenase, C-terminal Alide_1125 IPR020843 Polyketide synthase, enoylreductase domain Alide_1125 IPR013154 Alcohol dehydrogenase, N-terminal Alide_1125 IPR011032 GroES-like superfamily Alide_1125 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Alide_1126 IPR001453 MoaB/Mog domain Alide_1126 IPR008284 Molybdenum cofactor biosynthesis, conserved site Alide_1126 IPR036425 MoaB/Mog-like domain superfamily Alide_1127 IPR023153 PSPTO4464-like domain superfamily Alide_1127 IPR006839 Ribosome-associated, YjgA Alide_1128 IPR035068 Metalloprotease TldD/PmbA, N-terminal Alide_1128 IPR036059 Metalloprotease TldD/PmbA superfamily Alide_1128 IPR002510 Metalloprotease TldD/PmbA Alide_1135 IPR006200 Transcription regulator LexA Alide_1135 IPR006197 Peptidase S24, LexA-like Alide_1135 IPR015927 Peptidase S24/S26A/S26B/S26C Alide_1135 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1135 IPR036390 Winged helix DNA-binding domain superfamily Alide_1135 IPR036286 LexA/Signal peptidase-like superfamily Alide_1135 IPR039418 LexA-like Alide_1135 IPR006199 LexA repressor, DNA-binding domain Alide_1136 IPR009057 Homeobox-like domain superfamily Alide_1136 IPR002514 Transposase IS3/IS911family Alide_1136 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1142 IPR005677 Fumarate hydratase, class II Alide_1142 IPR008948 L-Aspartase-like Alide_1142 IPR000362 Fumarate lyase family Alide_1142 IPR020557 Fumarate lyase, conserved site Alide_1142 IPR022761 Fumarate lyase, N-terminal Alide_1142 IPR024083 Fumarase/histidase, N-terminal Alide_1142 IPR018951 Fumarase C, C-terminal Alide_1143 IPR000595 Cyclic nucleotide-binding domain Alide_1143 IPR018490 Cyclic nucleotide-binding-like Alide_1143 IPR012318 Crp-type HTH domain Alide_1143 IPR014710 RmlC-like jelly roll fold Alide_1143 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1143 IPR036390 Winged helix DNA-binding domain superfamily Alide_1144 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain Alide_1145 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_1145 IPR035906 MetI-like superfamily Alide_1146 IPR017871 ABC transporter, conserved site Alide_1146 IPR000644 CBS domain Alide_1146 IPR003439 ABC transporter-like Alide_1146 IPR003593 AAA+ ATPase domain Alide_1146 IPR005892 Glycine betaine transport ATP-binding subunit Alide_1146 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1148 IPR022933 Uncharacterised protein family UPF0353 Alide_1148 IPR024163 Aerotolerance regulator, N-terminal Alide_1148 IPR036465 von Willebrand factor A-like domain superfamily Alide_1148 IPR002035 von Willebrand factor, type A Alide_1149 IPR036465 von Willebrand factor A-like domain superfamily Alide_1149 IPR002881 Domain of unknown function DUF58 Alide_1150 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1150 IPR041628 ChlI/MoxR, AAA lid domain Alide_1150 IPR011703 ATPase, AAA-3 Alide_1151 IPR001478 PDZ domain Alide_1151 IPR036034 PDZ superfamily Alide_1151 IPR011782 Peptidase S1C, Do Alide_1151 IPR009003 Peptidase S1, PA clan Alide_1151 IPR001940 Peptidase S1C Alide_1152 IPR004675 Alkylhydroperoxidase AhpD core Alide_1152 IPR029032 AhpD-like Alide_1152 IPR003779 Carboxymuconolactone decarboxylase-like Alide_1153 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1153 IPR036390 Winged helix DNA-binding domain superfamily Alide_1153 IPR001845 HTH ArsR-type DNA-binding domain Alide_1153 IPR011991 ArsR-like helix-turn-helix domain Alide_1155 IPR001130 TatD family Alide_1155 IPR032466 Metal-dependent hydrolase Alide_1155 IPR018228 Deoxyribonuclease, TatD-related, conserved site Alide_1157 IPR030374 Polyamine biosynthesis domain Alide_1157 IPR001045 Spermidine/spermine synthases Alide_1157 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_1158 IPR003593 AAA+ ATPase domain Alide_1158 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1158 IPR042181 Type II secretion system, protein E, N-terminal Alide_1158 IPR013369 Type II secretion system GspE Alide_1158 IPR037257 General secretory system II, protein E, N-terminal superfamily Alide_1158 IPR001482 Type II/IV secretion system protein Alide_1160 IPR002823 Protein of unknown function DUF112, transmembrane Alide_1161 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_1161 IPR011283 Acetoacetyl-CoA reductase Alide_1161 IPR036291 NAD(P)-binding domain superfamily Alide_1161 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_1163 IPR035919 EAL domain superfamily Alide_1163 IPR001633 EAL domain Alide_1163 IPR029787 Nucleotide cyclase Alide_1163 IPR005330 MHYT domain Alide_1163 IPR000160 GGDEF domain Alide_1164 IPR000620 EamA domain Alide_1165 IPR036291 NAD(P)-binding domain superfamily Alide_1165 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site Alide_1165 IPR013154 Alcohol dehydrogenase, N-terminal Alide_1165 IPR013149 Alcohol dehydrogenase, C-terminal Alide_1165 IPR011032 GroES-like superfamily Alide_1165 IPR020843 Polyketide synthase, enoylreductase domain Alide_1167 IPR000847 Transcription regulator HTH, LysR Alide_1167 IPR005119 LysR, substrate-binding Alide_1167 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1167 IPR036390 Winged helix DNA-binding domain superfamily Alide_1168 IPR016833 Putative sodium bile acid cotransporter Alide_1168 IPR038770 Sodium/solute symporter superfamily Alide_1169 IPR003841 Sodium-dependent phosphate transport protein Alide_1169 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein Alide_1170 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Alide_1170 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA Alide_1170 IPR042281 GpdQ, beta-strand dimerisation domain Alide_1170 IPR042283 GpdQ, catalytic alpha/beta sandwich domain Alide_1171 IPR013611 Transport-associated OB, type 2 Alide_1171 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1171 IPR008995 Molybdate/tungstate binding, C-terminal Alide_1171 IPR017871 ABC transporter, conserved site Alide_1171 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 Alide_1171 IPR003439 ABC transporter-like Alide_1171 IPR003593 AAA+ ATPase domain Alide_1171 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal Alide_1172 IPR035906 MetI-like superfamily Alide_1172 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_1173 IPR011867 Molybdate ABC transporter, permease protein Alide_1173 IPR035906 MetI-like superfamily Alide_1173 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_1174 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_1174 IPR026045 Ferric binding protein Alide_1175 IPR000843 LacI-type HTH domain Alide_1175 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Alide_1175 IPR028082 Periplasmic binding protein-like I Alide_1176 IPR001872 Peptidase A8, signal peptidase II Alide_1177 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain Alide_1177 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_1177 IPR023585 Isoleucine-tRNA ligase, type 1 Alide_1177 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Alide_1177 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Alide_1177 IPR010663 Zinc finger, FPG/IleRS-type Alide_1177 IPR002301 Isoleucine-tRNA ligase Alide_1177 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Alide_1177 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Alide_1177 IPR002300 Aminoacyl-tRNA synthetase, class Ia Alide_1178 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_1178 IPR023465 Riboflavin kinase domain superfamily Alide_1178 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic Alide_1178 IPR023468 Riboflavin kinase Alide_1178 IPR015864 FAD synthetase Alide_1178 IPR002606 Riboflavin kinase, bacterial Alide_1180 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_1180 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_1180 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_1180 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_1180 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_1180 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_1180 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_1181 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_1181 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_1181 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_1181 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_1181 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_1181 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_1182 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1182 IPR007432 Protein of unknown function DUF480 Alide_1182 IPR036390 Winged helix DNA-binding domain superfamily Alide_1183 IPR004607 Phosphoribosylglycinamide formyltransferase Alide_1183 IPR036477 Formyl transferase, N-terminal domain superfamily Alide_1183 IPR002376 Formyl transferase, N-terminal Alide_1183 IPR001555 Phosphoribosylglycinamide formyltransferase, active site Alide_1184 IPR004573 rRNA small subunit methyltransferase B Alide_1184 IPR006027 NusB/RsmB/TIM44 Alide_1184 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site Alide_1184 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_1184 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type Alide_1184 IPR035926 NusB-like superfamily Alide_1184 IPR023267 RNA (C5-cytosine) methyltransferase Alide_1185 IPR011332 Zinc-binding ribosomal protein Alide_1185 IPR038584 Ribosomal protein L33 superfamily Alide_1185 IPR018264 Ribosomal protein L33, conserved site Alide_1185 IPR001705 Ribosomal protein L33 Alide_1186 IPR037147 Ribosomal protein L28/L24 superfamily Alide_1186 IPR001383 Ribosomal protein L28 Alide_1186 IPR026569 Ribosomal protein L28/L24 Alide_1186 IPR034704 L28p-like Alide_1187 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_1187 IPR023753 FAD/NAD(P)-binding domain Alide_1187 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site Alide_1187 IPR005982 Thioredoxin reductase Alide_1188 IPR036390 Winged helix DNA-binding domain superfamily Alide_1188 IPR018541 FtsK gamma domain Alide_1188 IPR002543 FtsK domain Alide_1188 IPR025199 DNA translocase FtsK, 4TM region Alide_1188 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1188 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1188 IPR041027 FtsK alpha domain Alide_1189 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria Alide_1189 IPR029046 Lipoprotein localisation LolA/LolB/LppX Alide_1189 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Alide_1190 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase Alide_1190 IPR026046 UbiA prenyltransferase domain containing protein 1 Alide_1190 IPR000537 UbiA prenyltransferase family Alide_1191 IPR036895 Uracil-DNA glycosylase-like domain superfamily Alide_1191 IPR005122 Uracil-DNA glycosylase-like Alide_1192 IPR003593 AAA+ ATPase domain Alide_1192 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Alide_1192 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1192 IPR021886 MgsA AAA+ ATPase C-terminal Alide_1192 IPR032423 AAA C-terminal domain Alide_1192 IPR003959 ATPase, AAA-type, core Alide_1193 IPR001851 ABC transporter, permease Alide_1194 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal Alide_1194 IPR001851 ABC transporter, permease Alide_1195 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Alide_1195 IPR017871 ABC transporter, conserved site Alide_1195 IPR003593 AAA+ ATPase domain Alide_1195 IPR003439 ABC transporter-like Alide_1195 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1196 IPR003593 AAA+ ATPase domain Alide_1196 IPR017871 ABC transporter, conserved site Alide_1196 IPR003439 ABC transporter-like Alide_1196 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1196 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_1199 IPR018445 Putative phosphate transport regulator Alide_1199 IPR038078 PhoU-like domain superfamily Alide_1200 IPR001204 Phosphate transporter Alide_1202 IPR000182 GNAT domain Alide_1202 IPR016181 Acyl-CoA N-acyltransferase Alide_1203 IPR023803 Ribosomal protein S16 domain superfamily Alide_1203 IPR000307 Ribosomal protein S16 Alide_1204 IPR036976 RimM, N-terminal domain superfamily Alide_1204 IPR002676 RimM, N-terminal Alide_1204 IPR011033 PRC-barrel-like superfamily Alide_1204 IPR009000 Translation protein, beta-barrel domain superfamily Alide_1204 IPR027275 PRC-barrel domain Alide_1204 IPR011961 16S rRNA processing protein RimM Alide_1205 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain Alide_1205 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal Alide_1205 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Alide_1205 IPR029028 Alpha/beta knot methyltransferases Alide_1205 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria Alide_1206 IPR008991 Translation protein SH3-like domain superfamily Alide_1206 IPR018257 Ribosomal protein L19, conserved site Alide_1206 IPR001857 Ribosomal protein L19 Alide_1206 IPR038657 Ribosomal protein L19 superfamily Alide_1207 IPR000086 NUDIX hydrolase domain Alide_1207 IPR023735 Uncharacterised nudix hydrolase NudL Alide_1207 IPR015797 NUDIX hydrolase-like domain superfamily Alide_1207 IPR000059 NUDIX hydrolase, NudL, conserved site Alide_1208 IPR004485 Cobalamin biosynthesis CobD/CbiB Alide_1208 IPR031347 Protein AmpE Alide_1209 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_1209 IPR015424 Pyridoxal phosphate-dependent transferase Alide_1209 IPR004839 Aminotransferase, class I/classII Alide_1209 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site Alide_1209 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_1209 IPR005861 Histidinol-phosphate aminotransferase family Alide_1210 IPR011547 SLC26A/SulP transporter domain Alide_1210 IPR001902 SLC26A/SulP transporter Alide_1210 IPR002645 STAS domain Alide_1210 IPR036513 STAS domain superfamily Alide_1211 IPR010914 RsgA GTPase domain Alide_1211 IPR004881 Ribosome biogenesis GTPase RsgA Alide_1211 IPR012340 Nucleic acid-binding, OB-fold Alide_1211 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain Alide_1211 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal Alide_1211 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1212 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily Alide_1212 IPR001533 Pterin 4 alpha carbinolamine dehydratase Alide_1213 IPR022919 Peptidase M48, protease HtpX, putative Alide_1213 IPR001915 Peptidase M48 Alide_1214 IPR013520 Exonuclease, RNase T/DNA polymerase III Alide_1214 IPR036397 Ribonuclease H superfamily Alide_1214 IPR012337 Ribonuclease H-like superfamily Alide_1214 IPR022894 Oligoribonuclease Alide_1215 IPR000709 Leu/Ile/Val-binding protein Alide_1215 IPR028081 Leucine-binding protein domain Alide_1215 IPR028082 Periplasmic binding protein-like I Alide_1216 IPR028621 ATP-dependent RNA helicase SrmB Alide_1216 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1216 IPR001650 Helicase, C-terminal Alide_1216 IPR011545 DEAD/DEAH box helicase domain Alide_1216 IPR014014 RNA helicase, DEAD-box type, Q motif Alide_1216 IPR014001 Helicase superfamily 1/2, ATP-binding domain Alide_1216 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Alide_1217 IPR013655 PAS fold-3 Alide_1217 IPR000700 PAS-associated, C-terminal Alide_1217 IPR035965 PAS domain superfamily Alide_1217 IPR000014 PAS domain Alide_1217 IPR001610 PAC motif Alide_1217 IPR029787 Nucleotide cyclase Alide_1217 IPR007895 MASE1 Alide_1217 IPR000160 GGDEF domain Alide_1217 IPR035919 EAL domain superfamily Alide_1217 IPR001633 EAL domain Alide_1217 IPR013656 PAS fold-4 Alide_1218 IPR004812 Drug resistance transporter Bcr/CmlA subfamily Alide_1218 IPR011701 Major facilitator superfamily Alide_1218 IPR020846 Major facilitator superfamily domain Alide_1218 IPR036259 MFS transporter superfamily Alide_1225 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1225 IPR017871 ABC transporter, conserved site Alide_1225 IPR015859 ABC transporter, taurine import, TauD Alide_1225 IPR003439 ABC transporter-like Alide_1225 IPR003593 AAA+ ATPase domain Alide_1227 IPR037066 TonB-dependent receptor, plug domain superfamily Alide_1227 IPR039426 Vitamin B12 transporter BtuB-like Alide_1227 IPR010916 TonB box, conserved site Alide_1227 IPR000531 TonB-dependent receptor-like, beta-barrel Alide_1227 IPR012910 TonB-dependent receptor, plug domain Alide_1227 IPR010917 TonB-dependent receptor, conserved site Alide_1227 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Alide_1228 IPR003672 CobN/magnesium chelatase Alide_1228 IPR011953 Cobaltochelatase, CobN subunit Alide_1236 IPR018117 DNA methylase, C-5 cytosine-specific, active site Alide_1236 IPR001525 C-5 cytosine methyltransferase Alide_1236 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_1242 IPR008766 Replication gene A protein Alide_1251 IPR036420 BRCT domain superfamily Alide_1251 IPR001357 BRCT domain Alide_1251 IPR001679 NAD-dependent DNA ligase Alide_1251 IPR018239 NAD-dependent DNA ligase, active site Alide_1251 IPR033136 NAD-dependent DNA ligase, conserved site Alide_1251 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type Alide_1251 IPR010994 RuvA domain 2-like Alide_1251 IPR004150 NAD-dependent DNA ligase, OB-fold Alide_1251 IPR012340 Nucleic acid-binding, OB-fold Alide_1251 IPR013840 NAD-dependent DNA ligase, N-terminal Alide_1251 IPR013839 NAD-dependent DNA ligase, adenylation Alide_1251 IPR041663 DisA/LigA, helix-hairpin-helix motif Alide_1251 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Alide_1285 IPR030935 Phage portal protein PBSX family, Proteobacteria Alide_1285 IPR006430 Phage portal protein PBSX family Alide_1286 IPR013785 Aldolase-type TIM barrel Alide_1286 IPR005994 Guanosine monophosphate reductase, type2 Alide_1286 IPR015875 IMP dehydrogenase / GMP reductase, conserved site Alide_1286 IPR001093 IMP dehydrogenase/GMP reductase Alide_1287 IPR005753 DNA helicase, ATP-dependent, UvrD type Alide_1287 IPR014017 UvrD-like DNA helicase, C-terminal Alide_1287 IPR000212 DNA helicase, UvrD/REP type Alide_1287 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1287 IPR014016 UvrD-like helicase, ATP-binding domain Alide_1287 IPR013986 DExx box DNA helicase domain superfamily Alide_1287 IPR034739 UvrD/AddA helicase, N-terminal Alide_1289 IPR000160 GGDEF domain Alide_1289 IPR029016 GAF-like domain superfamily Alide_1289 IPR001633 EAL domain Alide_1289 IPR013515 Phytochrome, central region Alide_1289 IPR016132 Phytochrome chromophore attachment domain Alide_1289 IPR001294 Phytochrome Alide_1289 IPR003018 GAF domain Alide_1289 IPR035919 EAL domain superfamily Alide_1289 IPR029787 Nucleotide cyclase Alide_1291 IPR011009 Protein kinase-like domain superfamily Alide_1291 IPR002575 Aminoglycoside phosphotransferase Alide_1291 IPR005280 Homoserine kinase, type II Alide_1294 IPR002562 3'-5' exonuclease domain Alide_1294 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal Alide_1294 IPR002421 5'-3' exonuclease, N-terminal Alide_1294 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Alide_1294 IPR002298 DNA polymerase A Alide_1294 IPR001098 DNA-directed DNA polymerase, family A, palm domain Alide_1294 IPR020045 DNA polymerase I-like, H3TH domain Alide_1294 IPR018320 DNA polymerase 1 Alide_1294 IPR008918 Helix-hairpin-helix motif, class 2 Alide_1294 IPR029060 PIN-like domain superfamily Alide_1294 IPR012337 Ribonuclease H-like superfamily Alide_1294 IPR036397 Ribonuclease H superfamily Alide_1294 IPR019760 DNA-directed DNA polymerase, family A, conserved site Alide_1295 IPR000847 Transcription regulator HTH, LysR Alide_1295 IPR005119 LysR, substrate-binding Alide_1295 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1295 IPR036390 Winged helix DNA-binding domain superfamily Alide_1296 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_1296 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Alide_1296 IPR036291 NAD(P)-binding domain superfamily Alide_1296 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_1297 IPR042100 Bordetella uptake gene, domain 1 Alide_1297 IPR005064 Bordetella uptake gene Alide_1299 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain Alide_1299 IPR005119 LysR, substrate-binding Alide_1299 IPR036390 Winged helix DNA-binding domain superfamily Alide_1299 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1299 IPR000847 Transcription regulator HTH, LysR Alide_1300 IPR042100 Bordetella uptake gene, domain 1 Alide_1300 IPR005064 Bordetella uptake gene Alide_1301 IPR023606 CoA-transferase family III domain superfamily Alide_1301 IPR003673 CoA-transferase family III Alide_1302 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_1302 IPR001753 Enoyl-CoA hydratase/isomerase Alide_1302 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_1302 IPR029045 ClpP/crotonase-like domain superfamily Alide_1303 IPR002925 Dienelactone hydrolase Alide_1303 IPR029058 Alpha/Beta hydrolase fold Alide_1305 IPR007492 LytTR DNA-binding domain Alide_1305 IPR001789 Signal transduction response regulator, receiver domain Alide_1305 IPR011006 CheY-like superfamily Alide_1306 IPR036412 HAD-like superfamily Alide_1306 IPR023214 HAD superfamily Alide_1307 IPR023028 Mannitol-1-phosphate 5-dehydrogenase Alide_1307 IPR000669 Mannitol dehydrogenase Alide_1307 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Alide_1307 IPR013118 Mannitol dehydrogenase, C-terminal Alide_1307 IPR023027 Mannitol dehydrogenase, conserved site Alide_1307 IPR013131 Mannitol dehydrogenase, N-terminal Alide_1307 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_1307 IPR036291 NAD(P)-binding domain superfamily Alide_1309 IPR011545 DEAD/DEAH box helicase domain Alide_1309 IPR003711 CarD-like/TRCF domain Alide_1309 IPR036101 CarD-like/TRCF domain superfamily Alide_1309 IPR041471 UvrB, interaction domain Alide_1309 IPR005118 Transcription-repair-coupling factor, C-terminal domain Alide_1309 IPR037235 TRCF-like, C-terminal domain Alide_1309 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1309 IPR004576 Transcription-repair coupling factor Alide_1309 IPR001650 Helicase, C-terminal Alide_1309 IPR014001 Helicase superfamily 1/2, ATP-binding domain Alide_1310 IPR026596 Bifunctional enzyme IspD/IspF Alide_1310 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Alide_1310 IPR029044 Nucleotide-diphospho-sugar transferases Alide_1310 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily Alide_1310 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site Alide_1310 IPR034683 Cytidylyltransferase IspD/TarI Alide_1310 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Alide_1310 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site Alide_1311 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Alide_1311 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily Alide_1311 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site Alide_1312 IPR003660 HAMP domain Alide_1312 IPR005467 Histidine kinase domain Alide_1312 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_1312 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_1312 IPR003594 Histidine kinase/HSP90-like ATPase Alide_1312 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_1312 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_1313 IPR001789 Signal transduction response regulator, receiver domain Alide_1313 IPR016032 Signal transduction response regulator, C-terminal effector Alide_1313 IPR011006 CheY-like superfamily Alide_1313 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1313 IPR039420 Transcriptional regulatory protein WalR-like Alide_1313 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_1315 IPR011294 3-hydroxybutyrate dehydrogenase Alide_1315 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_1315 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_1315 IPR036291 NAD(P)-binding domain superfamily Alide_1317 IPR003607 HD/PDEase domain Alide_1317 IPR002912 ACT domain Alide_1317 IPR033655 RelA, TGS domain Alide_1317 IPR012676 TGS-like Alide_1317 IPR004095 TGS Alide_1317 IPR012675 Beta-grasp domain superfamily Alide_1317 IPR007685 RelA/SpoT Alide_1317 IPR004811 RelA/SpoT family Alide_1319 IPR000504 RNA recognition motif domain Alide_1319 IPR035979 RNA-binding domain superfamily Alide_1319 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Alide_1320 IPR012909 PHA accumulation regulator DNA-binding, N-terminal Alide_1320 IPR007897 PHB accumulation regulatory Alide_1320 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR Alide_1321 IPR005839 Methylthiotransferase Alide_1321 IPR002792 TRAM domain Alide_1321 IPR006638 Elp3/MiaB/NifB Alide_1321 IPR005840 Ribosomal protein S12 methylthiotransferase RimO Alide_1321 IPR020612 Methylthiotransferase, conserved site Alide_1321 IPR013848 Methylthiotransferase, N-terminal Alide_1321 IPR038135 Methylthiotransferase, N-terminal domain superfamily Alide_1321 IPR041582 RimO, TRAM domain Alide_1321 IPR007197 Radical SAM Alide_1321 IPR023404 Radical SAM, alpha/beta horseshoe Alide_1322 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Alide_1324 IPR000847 Transcription regulator HTH, LysR Alide_1324 IPR036390 Winged helix DNA-binding domain superfamily Alide_1324 IPR005119 LysR, substrate-binding Alide_1324 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1325 IPR000891 Pyruvate carboxyltransferase Alide_1325 IPR013785 Aldolase-type TIM barrel Alide_1326 IPR023606 CoA-transferase family III domain superfamily Alide_1326 IPR003673 CoA-transferase family III Alide_1327 IPR005064 Bordetella uptake gene Alide_1327 IPR042100 Bordetella uptake gene, domain 1 Alide_1328 IPR036291 NAD(P)-binding domain superfamily Alide_1328 IPR013332 Ketopantoate reductase, N-terminal domain Alide_1328 IPR013752 Ketopantoate reductase, C-terminal domain Alide_1328 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_1328 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Alide_1331 IPR007627 RNA polymerase sigma-70 region 2 Alide_1331 IPR007624 RNA polymerase sigma-70 region 3 Alide_1331 IPR028630 RNA polymerase sigma factor RpoD Alide_1331 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1331 IPR009042 RNA polymerase sigma-70 region 1.2 Alide_1331 IPR000943 RNA polymerase sigma-70 Alide_1331 IPR013325 RNA polymerase sigma factor, region 2 Alide_1331 IPR042189 Sigma-70 factor, region 1.1 superfamily Alide_1331 IPR014284 RNA polymerase sigma-70 like domain Alide_1331 IPR007630 RNA polymerase sigma-70 region 4 Alide_1331 IPR012760 RNA polymerase sigma factor RpoD, C-terminal Alide_1331 IPR007127 RNA polymerase sigma factor 70, region 1.1 Alide_1331 IPR013324 RNA polymerase sigma factor, region 3/4-like Alide_1331 IPR007631 RNA polymerase sigma factor 70, non-essential domain Alide_1332 IPR019475 DNA primase, DnaB-helicase binding domain Alide_1332 IPR002694 Zinc finger, CHC2-type Alide_1332 IPR006171 TOPRIM domain Alide_1332 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Alide_1332 IPR030846 DNA primase DnaG, bacteria Alide_1332 IPR036977 DNA Primase, CHC2-type zinc finger Alide_1332 IPR034151 Bacterial DnaG primase, TOPRIM domain Alide_1332 IPR013173 DNA primase DnaG, DnaB-binding domain Alide_1332 IPR013264 DNA primase, catalytic core, N-terminal Alide_1332 IPR006295 DNA primase, DnaG Alide_1332 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Alide_1333 IPR025110 AMP-binding enzyme, C-terminal domain Alide_1333 IPR020845 AMP-binding, conserved site Alide_1333 IPR042099 AMP-dependent synthetase-like superfamily Alide_1333 IPR000873 AMP-dependent synthetase/ligase Alide_1334 IPR001736 Phospholipase D/Transphosphatidylase Alide_1334 IPR025202 Phospholipase D-like domain Alide_1334 IPR030871 Cardiolipin synthase C Alide_1335 IPR003725 Molybdenum-binding protein ModE, N-terminal Alide_1335 IPR016462 Molybdate-dependent transcriptional regulator ModE Alide_1335 IPR004606 Molybdenum-pterin binding Alide_1335 IPR008995 Molybdate/tungstate binding, C-terminal Alide_1335 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1335 IPR000847 Transcription regulator HTH, LysR Alide_1335 IPR036390 Winged helix DNA-binding domain superfamily Alide_1335 IPR005116 Transport-associated OB, type 1 Alide_1336 IPR035906 MetI-like superfamily Alide_1336 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_1337 IPR003593 AAA+ ATPase domain Alide_1337 IPR003439 ABC transporter-like Alide_1337 IPR017871 ABC transporter, conserved site Alide_1337 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1338 IPR024370 PBP domain Alide_1340 IPR003593 AAA+ ATPase domain Alide_1340 IPR003439 ABC transporter-like Alide_1340 IPR017871 ABC transporter, conserved site Alide_1340 IPR015852 ABC transporter, molybdenum import, ModC Alide_1340 IPR008995 Molybdate/tungstate binding, C-terminal Alide_1340 IPR011868 Molybdate ABC transporter, ATP-binding protein Alide_1340 IPR004606 Molybdenum-pterin binding Alide_1340 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1340 IPR005116 Transport-associated OB, type 1 Alide_1341 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_1341 IPR035906 MetI-like superfamily Alide_1341 IPR011867 Molybdate ABC transporter, permease protein Alide_1342 IPR005950 Molybdate ABC transporter, substrate-binding protein Alide_1343 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1343 IPR008995 Molybdate/tungstate binding, C-terminal Alide_1343 IPR016462 Molybdate-dependent transcriptional regulator ModE Alide_1343 IPR003725 Molybdenum-binding protein ModE, N-terminal Alide_1343 IPR005116 Transport-associated OB, type 1 Alide_1343 IPR004606 Molybdenum-pterin binding Alide_1343 IPR036390 Winged helix DNA-binding domain superfamily Alide_1343 IPR000847 Transcription regulator HTH, LysR Alide_1344 IPR003593 AAA+ ATPase domain Alide_1344 IPR003439 ABC transporter-like Alide_1344 IPR017871 ABC transporter, conserved site Alide_1344 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1344 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Alide_1345 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1345 IPR003439 ABC transporter-like Alide_1345 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_1345 IPR003593 AAA+ ATPase domain Alide_1345 IPR017871 ABC transporter, conserved site Alide_1348 IPR001851 ABC transporter, permease Alide_1353 IPR008978 HSP20-like chaperone Alide_1353 IPR002068 Alpha crystallin/Hsp20 domain Alide_1354 IPR011924 Lipoprotein releasing system, ATP-binding protein Alide_1354 IPR015854 ABC transporter, lipoprotein release, LolD Alide_1354 IPR017871 ABC transporter, conserved site Alide_1354 IPR003439 ABC transporter-like Alide_1354 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1354 IPR003593 AAA+ ATPase domain Alide_1355 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1355 IPR018022 IPP transferase Alide_1355 IPR039657 Dimethylallyltransferase Alide_1356 IPR004812 Drug resistance transporter Bcr/CmlA subfamily Alide_1356 IPR011701 Major facilitator superfamily Alide_1356 IPR020846 Major facilitator superfamily domain Alide_1356 IPR036259 MFS transporter superfamily Alide_1357 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Alide_1357 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Alide_1357 IPR036291 NAD(P)-binding domain superfamily Alide_1358 IPR036265 HIT-like superfamily Alide_1358 IPR019808 Histidine triad, conserved site Alide_1358 IPR011146 HIT-like domain Alide_1358 IPR039384 HINT family Alide_1358 IPR001310 Histidine triad (HIT) protein Alide_1359 IPR023614 Porin domain superfamily Alide_1359 IPR002299 Porin, Neisseria sp. type Alide_1359 IPR033900 Porin domain, Gram-negative type Alide_1361 IPR013655 PAS fold-3 Alide_1361 IPR000700 PAS-associated, C-terminal Alide_1361 IPR000160 GGDEF domain Alide_1361 IPR007895 MASE1 Alide_1361 IPR029787 Nucleotide cyclase Alide_1361 IPR001633 EAL domain Alide_1361 IPR035919 EAL domain superfamily Alide_1361 IPR001610 PAC motif Alide_1361 IPR013656 PAS fold-4 Alide_1361 IPR035965 PAS domain superfamily Alide_1361 IPR000014 PAS domain Alide_1362 IPR003439 ABC transporter-like Alide_1362 IPR017871 ABC transporter, conserved site Alide_1362 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1362 IPR003593 AAA+ ATPase domain Alide_1362 IPR015861 ABC transporter, ribose import, RbsA Alide_1365 IPR003760 ABC transporter substrate-binding protein PnrA-like Alide_1366 IPR003760 ABC transporter substrate-binding protein PnrA-like Alide_1367 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_1367 IPR006076 FAD dependent oxidoreductase Alide_1368 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1368 IPR003593 AAA+ ATPase domain Alide_1368 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type Alide_1368 IPR003439 ABC transporter-like Alide_1368 IPR017871 ABC transporter, conserved site Alide_1370 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Alide_1370 IPR018313 Solute-binding protein family 3, conserved site Alide_1370 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter Alide_1370 IPR001320 Ionotropic glutamate receptor Alide_1371 IPR014757 Transcription regulator IclR, C-terminal Alide_1371 IPR005471 Transcription regulator IclR, N-terminal Alide_1371 IPR029016 GAF-like domain superfamily Alide_1371 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1371 IPR036390 Winged helix DNA-binding domain superfamily Alide_1373 IPR028892 Adenine deaminase type 2 Alide_1373 IPR032466 Metal-dependent hydrolase Alide_1373 IPR001365 Adenosine/AMP deaminase domain Alide_1373 IPR006330 Adenosine/adenine deaminase Alide_1375 IPR000914 Solute-binding protein family 5 domain Alide_1375 IPR039424 Solute-binding protein family 5 Alide_1375 IPR030678 Peptide/nickel binding protein, MppA-type Alide_1375 IPR023765 Solute-binding protein family 5, conserved site Alide_1376 IPR003593 AAA+ ATPase domain Alide_1376 IPR003439 ABC transporter-like Alide_1376 IPR017871 ABC transporter, conserved site Alide_1376 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Alide_1376 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1377 IPR003439 ABC transporter-like Alide_1377 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1377 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Alide_1377 IPR017871 ABC transporter, conserved site Alide_1377 IPR003593 AAA+ ATPase domain Alide_1378 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_1378 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Alide_1378 IPR035906 MetI-like superfamily Alide_1379 IPR035906 MetI-like superfamily Alide_1379 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_1380 IPR005119 LysR, substrate-binding Alide_1380 IPR036390 Winged helix DNA-binding domain superfamily Alide_1380 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1380 IPR000847 Transcription regulator HTH, LysR Alide_1380 IPR037424 Regulatory protein NocR, PBP2 domain Alide_1381 IPR007325 Kynurenine formamidase/cyclase-like Alide_1381 IPR037175 Kynurenine formamidase superfamily Alide_1381 IPR017484 Kynurenine formamidase, bacteria Alide_1382 IPR005358 Putative zinc- or iron-chelating domain containing protein Alide_1384 IPR030389 FeoB-type guanine nucleotide-binding (G) domain Alide_1384 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Alide_1384 IPR003373 Ferrous iron transport protein B Alide_1384 IPR011640 Ferrous iron transport protein B, C-terminal Alide_1384 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1384 IPR006073 GTP binding domain Alide_1386 IPR005358 Putative zinc- or iron-chelating domain containing protein Alide_1389 IPR024904 Ornithine carbamoyltransferase Alide_1389 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain Alide_1389 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily Alide_1389 IPR006130 Aspartate/ornithine carbamoyltransferase Alide_1389 IPR002292 Ornithine/putrescine carbamoyltransferase Alide_1389 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding Alide_1390 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_1390 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_1390 IPR015424 Pyridoxal phosphate-dependent transferase Alide_1390 IPR005814 Aminotransferase class-III Alide_1390 IPR004636 Acetylornithine/Succinylornithine transaminase family Alide_1392 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Alide_1392 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Alide_1394 IPR002583 Ribosomal protein S20 Alide_1394 IPR036510 Ribosomal protein S20 superfamily Alide_1395 IPR004268 Peptidoglycan biosynthesis protein MurJ Alide_1396 IPR011990 Tetratricopeptide-like helical domain superfamily Alide_1396 IPR019734 Tetratricopeptide repeat Alide_1396 IPR032698 Protein SirB1, N-terminal Alide_1396 IPR013026 Tetratricopeptide repeat-containing domain Alide_1397 IPR006015 Universal stress protein A family Alide_1397 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_1397 IPR006016 UspA Alide_1399 IPR036921 PurM-like, N-terminal domain superfamily Alide_1399 IPR016188 PurM-like, N-terminal domain Alide_1399 IPR036676 PurM-like, C-terminal domain superfamily Alide_1399 IPR010918 PurM-like, C-terminal domain Alide_1399 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase Alide_1400 IPR000101 Gamma-glutamyltranspeptidase Alide_1400 IPR029055 Nucleophile aminohydrolases, N-terminal Alide_1401 IPR020591 Chromosomal replication control, initiator DnaA-like Alide_1401 IPR013317 Chromosomal replication initiator protein DnaA Alide_1401 IPR017788 DnaA regulatory inactivator Hda Alide_1401 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1403 IPR025866 Polymerase A arginine-rich C-terminal domain Alide_1403 IPR010206 Poly(A) polymerase I Alide_1403 IPR002646 Poly A polymerase, head domain Alide_1403 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Alide_1404 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK Alide_1404 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily Alide_1405 IPR029044 Nucleotide-diphospho-sugar transferases Alide_1405 IPR001173 Glycosyltransferase 2-like Alide_1406 IPR003342 Glycosyl transferase family 39/83 Alide_1406 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase Alide_1409 IPR042100 Bordetella uptake gene, domain 1 Alide_1409 IPR005064 Bordetella uptake gene Alide_1410 IPR005064 Bordetella uptake gene Alide_1410 IPR042100 Bordetella uptake gene, domain 1 Alide_1412 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1412 IPR036390 Winged helix DNA-binding domain superfamily Alide_1412 IPR000847 Transcription regulator HTH, LysR Alide_1412 IPR005119 LysR, substrate-binding Alide_1413 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site Alide_1413 IPR001926 Pyridoxal-phosphate dependent enzyme Alide_1413 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA Alide_1413 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Alide_1414 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Alide_1414 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Alide_1414 IPR001433 Oxidoreductase FAD/NAD(P)-binding Alide_1414 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Alide_1414 IPR017927 FAD-binding domain, ferredoxin reductase-type Alide_1414 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Alide_1414 IPR036010 2Fe-2S ferredoxin-like superfamily Alide_1414 IPR012675 Beta-grasp domain superfamily Alide_1414 IPR017938 Riboflavin synthase-like beta-barrel Alide_1419 IPR042100 Bordetella uptake gene, domain 1 Alide_1419 IPR005064 Bordetella uptake gene Alide_1420 IPR023606 CoA-transferase family III domain superfamily Alide_1420 IPR003673 CoA-transferase family III Alide_1421 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_1421 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_1421 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_1421 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_1421 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_1421 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_1421 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_1422 IPR005119 LysR, substrate-binding Alide_1422 IPR000847 Transcription regulator HTH, LysR Alide_1422 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1422 IPR036390 Winged helix DNA-binding domain superfamily Alide_1439 IPR009057 Homeobox-like domain superfamily Alide_1439 IPR002514 Transposase IS3/IS911family Alide_1439 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1440 IPR001584 Integrase, catalytic core Alide_1440 IPR012337 Ribonuclease H-like superfamily Alide_1440 IPR036397 Ribonuclease H superfamily Alide_1440 IPR025948 HTH-like domain Alide_1445 IPR011010 DNA breaking-rejoining enzyme, catalytic core Alide_1445 IPR013762 Integrase-like, catalytic domain superfamily Alide_1445 IPR002104 Integrase, catalytic domain Alide_1445 IPR038488 Integrase, DNA-binding domain superfamily Alide_1445 IPR025166 Integrase, DNA-binding domain Alide_1445 IPR010998 Integrase/recombinase, N-terminal Alide_1447 IPR011545 DEAD/DEAH box helicase domain Alide_1447 IPR028622 ATP-dependent RNA helicase RhlE Alide_1447 IPR014001 Helicase superfamily 1/2, ATP-binding domain Alide_1447 IPR001650 Helicase, C-terminal Alide_1447 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1447 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Alide_1447 IPR014014 RNA helicase, DEAD-box type, Q motif Alide_1448 IPR003439 ABC transporter-like Alide_1448 IPR032781 ABC-transporter extension domain Alide_1448 IPR017871 ABC transporter, conserved site Alide_1448 IPR022374 Energy-dependent translational throttle protein EttA Alide_1448 IPR003593 AAA+ ATPase domain Alide_1448 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1450 IPR016117 ArgJ-like domain superfamily Alide_1450 IPR005321 Peptidase S58, DmpA Alide_1455 IPR023299 P-type ATPase, cytoplasmic domain N Alide_1455 IPR036412 HAD-like superfamily Alide_1455 IPR018303 P-type ATPase, phosphorylation site Alide_1455 IPR023298 P-type ATPase, transmembrane domain superfamily Alide_1455 IPR023214 HAD superfamily Alide_1455 IPR017969 Heavy-metal-associated, conserved site Alide_1455 IPR008250 P-type ATPase, A domain superfamily Alide_1455 IPR001757 P-type ATPase Alide_1455 IPR027256 P-type ATPase, subfamily IB Alide_1455 IPR036163 Heavy metal-associated domain superfamily Alide_1455 IPR006121 Heavy metal-associated domain, HMA Alide_1456 IPR000551 MerR-type HTH domain Alide_1456 IPR009061 Putative DNA-binding domain superfamily Alide_1456 IPR011788 Zn(II)-responsive transcriptional regulator Alide_1461 IPR036652 YjeF N-terminal domain superfamily Alide_1461 IPR004443 YjeF N-terminal domain Alide_1461 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr Alide_1461 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase Alide_1461 IPR017953 Carbohydrate kinase, predicted, conserved site Alide_1461 IPR029056 Ribokinase-like Alide_1462 IPR023080 D-amino acid dehydrogenase DadA Alide_1462 IPR006076 FAD dependent oxidoreductase Alide_1462 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_1463 IPR023631 Amidase signature domain Alide_1463 IPR000120 Amidase Alide_1463 IPR036928 Amidase signature (AS) superfamily Alide_1464 IPR018130 Ribosomal protein S2, conserved site Alide_1464 IPR001865 Ribosomal protein S2 Alide_1464 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid Alide_1464 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Alide_1465 IPR009060 UBA-like superfamily Alide_1465 IPR018101 Translation elongation factor Ts, conserved site Alide_1465 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation Alide_1465 IPR036402 Elongation factor Ts, dimerisation domain superfamily Alide_1465 IPR001816 Translation elongation factor EFTs/EF1B Alide_1466 IPR015963 Uridylate kinase, bacteria Alide_1466 IPR011817 Uridylate kinase Alide_1466 IPR001048 Aspartate/glutamate/uridylate kinase Alide_1466 IPR036393 Acetylglutamate kinase-like superfamily Alide_1467 IPR023584 Ribosome recycling factor domain Alide_1467 IPR002661 Ribosome recycling factor Alide_1467 IPR036191 RRF superfamily Alide_1468 IPR001441 Decaprenyl diphosphate synthase-like Alide_1468 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site Alide_1468 IPR036424 Decaprenyl diphosphate synthase-like superfamily Alide_1469 IPR000374 Phosphatidate cytidylyltransferase Alide_1470 IPR036291 NAD(P)-binding domain superfamily Alide_1470 IPR036169 DXP reductoisomerase, C-terminal domain superfamily Alide_1470 IPR026877 DXP reductoisomerase C-terminal domain Alide_1470 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal Alide_1470 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal Alide_1470 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase Alide_1471 IPR001478 PDZ domain Alide_1471 IPR041489 PDZ domain 6 Alide_1471 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase Alide_1471 IPR008915 Peptidase M50 Alide_1471 IPR036034 PDZ superfamily Alide_1472 IPR010827 POTRA domain, BamA/TamA-like Alide_1472 IPR039910 Surface antigen D15-like Alide_1472 IPR023707 Outer membrane protein assembly factor BamA Alide_1472 IPR034746 POTRA domain Alide_1472 IPR000184 Bacterial surface antigen (D15) Alide_1474 IPR011004 Trimeric LpxA-like superfamily Alide_1474 IPR001451 Hexapeptide repeat Alide_1474 IPR018357 Hexapeptide transferase, conserved site Alide_1474 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region Alide_1474 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD Alide_1475 IPR029069 HotDog domain superfamily Alide_1475 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Alide_1475 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ Alide_1476 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily Alide_1476 IPR001451 Hexapeptide repeat Alide_1476 IPR018357 Hexapeptide transferase, conserved site Alide_1476 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Alide_1476 IPR011004 Trimeric LpxA-like superfamily Alide_1476 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal Alide_1477 IPR003835 Glycosyl transferase, family 19 Alide_1478 IPR022898 Ribonuclease HII Alide_1478 IPR024567 Ribonuclease HII/HIII domain Alide_1478 IPR001352 Ribonuclease HII/HIII Alide_1478 IPR012337 Ribonuclease H-like superfamily Alide_1478 IPR036397 Ribonuclease H superfamily Alide_1479 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Alide_1479 IPR029028 Alpha/beta knot methyltransferases Alide_1479 IPR001537 tRNA/rRNA methyltransferase, SpoU type Alide_1479 IPR029064 50S ribosomal protein L30e-like Alide_1479 IPR013123 RNA 2-O ribose methyltransferase, substrate binding Alide_1480 IPR010998 Integrase/recombinase, N-terminal Alide_1480 IPR004107 Integrase, SAM-like, N-terminal Alide_1480 IPR023009 Tyrosine recombinase XerC/XerD Alide_1480 IPR011010 DNA breaking-rejoining enzyme, catalytic core Alide_1480 IPR013762 Integrase-like, catalytic domain superfamily Alide_1480 IPR002104 Integrase, catalytic domain Alide_1481 IPR002514 Transposase IS3/IS911family Alide_1481 IPR009057 Homeobox-like domain superfamily Alide_1481 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1482 IPR001584 Integrase, catalytic core Alide_1482 IPR012337 Ribonuclease H-like superfamily Alide_1482 IPR036397 Ribonuclease H superfamily Alide_1482 IPR025948 HTH-like domain Alide_1484 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal Alide_1484 IPR028343 Fructose-1,6-bisphosphatase Alide_1484 IPR000146 Fructose-1,6-bisphosphatase class 1 Alide_1485 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase Alide_1485 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily Alide_1485 IPR042097 Aminopeptidase N-like , N-terminal Alide_1485 IPR014782 Peptidase M1, membrane alanine aminopeptidase Alide_1485 IPR012779 Peptidase M1, alanyl aminopeptidase Alide_1485 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal Alide_1485 IPR027268 Peptidase M4/M1, CTD superfamily Alide_1485 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold Alide_1485 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily Alide_1487 IPR000846 Dihydrodipicolinate reductase, N-terminal Alide_1487 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal Alide_1487 IPR036291 NAD(P)-binding domain superfamily Alide_1487 IPR010190 Diaminopimelate dehydrogenase, Ddh Alide_1490 IPR035906 MetI-like superfamily Alide_1490 IPR011867 Molybdate ABC transporter, permease protein Alide_1490 IPR006469 NifC-like ABC-type porter Alide_1490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_1491 IPR003593 AAA+ ATPase domain Alide_1491 IPR003439 ABC transporter-like Alide_1491 IPR017871 ABC transporter, conserved site Alide_1491 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA Alide_1491 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1491 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit Alide_1491 IPR013611 Transport-associated OB, type 2 Alide_1491 IPR008995 Molybdate/tungstate binding, C-terminal Alide_1492 IPR023210 NADP-dependent oxidoreductase domain Alide_1492 IPR036812 NADP-dependent oxidoreductase domain superfamily Alide_1492 IPR020471 Aldo/keto reductase Alide_1493 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Alide_1493 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily Alide_1493 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Alide_1494 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY Alide_1496 IPR034122 Retropepsin-like domain, bacterial Alide_1496 IPR001969 Aspartic peptidase, active site Alide_1496 IPR011969 Clan AA aspartic peptidase, C-terminal Alide_1496 IPR021109 Aspartic peptidase domain superfamily Alide_1497 IPR036183 YajQ-like superfamily Alide_1497 IPR007551 Protein of unknown function DUF520 Alide_1497 IPR035570 UPF0234, N-terminal Alide_1497 IPR035571 UPF0234-like, C-terminal Alide_1498 IPR006094 FAD linked oxidase, N-terminal Alide_1498 IPR016169 FAD-binding, type PCMH, subdomain 2 Alide_1498 IPR016166 FAD-binding domain, PCMH-type Alide_1498 IPR036318 FAD-binding, type PCMH-like superfamily Alide_1498 IPR016167 FAD-binding, type PCMH, subdomain 1 Alide_1498 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal Alide_1498 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase Alide_1498 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily Alide_1500 IPR003744 Queuosine precursor transporter Alide_1501 IPR018317 Queuosine biosynthesis protein QueC Alide_1501 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_1502 IPR008040 Hydantoinaseoxoprolinase, N-terminal Alide_1502 IPR002821 Hydantoinase A/oxoprolinase Alide_1503 IPR003692 Hydantoinase B/oxoprolinase Alide_1504 IPR016750 Acetophenone carboxylase beta subunit/Acetone carboxylase gamma subunit Alide_1505 IPR009057 Homeobox-like domain superfamily Alide_1505 IPR002078 RNA polymerase sigma factor 54 interaction domain Alide_1505 IPR025944 Sigma-54 interaction domain, conserved site Alide_1505 IPR029016 GAF-like domain superfamily Alide_1505 IPR003018 GAF domain Alide_1505 IPR003593 AAA+ ATPase domain Alide_1505 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1505 IPR002197 DNA binding HTH domain, Fis-type Alide_1506 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail Alide_1506 IPR001518 Argininosuccinate synthase Alide_1506 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_1506 IPR018223 Argininosuccinate synthase, conserved site Alide_1506 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body Alide_1506 IPR023437 Argininosuccinate synthase, type 2 subfamily Alide_1507 IPR011051 RmlC-like cupin domain superfamily Alide_1507 IPR009664 Pyrimidine/purine nucleoside phosphorylase Alide_1507 IPR014710 RmlC-like jelly roll fold Alide_1509 IPR006660 Arsenate reductase-like Alide_1509 IPR036249 Thioredoxin-like superfamily Alide_1509 IPR006504 Transcriptional regulator Spx/MgsR Alide_1510 IPR013221 Mur ligase, central Alide_1510 IPR036565 Mur-like, catalytic domain superfamily Alide_1510 IPR018109 Folylpolyglutamate synthetase, conserved site Alide_1510 IPR001645 Folylpolyglutamate synthetase Alide_1510 IPR036615 Mur ligase, C-terminal domain superfamily Alide_1510 IPR004101 Mur ligase, C-terminal Alide_1512 IPR003825 Colicin V production, CvpA Alide_1513 IPR035584 Amidophosphoribosyltransferase, N-terminal Alide_1513 IPR029057 Phosphoribosyltransferase-like Alide_1513 IPR005854 Amidophosphoribosyltransferase Alide_1513 IPR000836 Phosphoribosyltransferase domain Alide_1513 IPR017932 Glutamine amidotransferase type 2 domain Alide_1513 IPR029055 Nucleophile aminohydrolases, N-terminal Alide_1514 IPR006234 O-succinylhomoserine sulfhydrylase Alide_1514 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_1514 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_1514 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Alide_1514 IPR015424 Pyridoxal phosphate-dependent transferase Alide_1515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_1515 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Alide_1515 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Alide_1515 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial Alide_1515 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Alide_1515 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 Alide_1515 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 Alide_1515 IPR033910 Glutamyl-tRNA synthetase Alide_1515 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding Alide_1516 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_1516 IPR036291 NAD(P)-binding domain superfamily Alide_1516 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_1520 IPR004291 Transposase, IS66 Alide_1520 IPR024474 Zinc-finger binding domain of transposase IS66 Alide_1520 IPR024463 Transposase TnpC, homeodomain Alide_1520 IPR039552 Transposase IS66, C-terminal Alide_1524 IPR025948 HTH-like domain Alide_1524 IPR001584 Integrase, catalytic core Alide_1524 IPR012337 Ribonuclease H-like superfamily Alide_1524 IPR036397 Ribonuclease H superfamily Alide_1525 IPR009057 Homeobox-like domain superfamily Alide_1525 IPR002514 Transposase IS3/IS911family Alide_1529 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1529 IPR036390 Winged helix DNA-binding domain superfamily Alide_1529 IPR006199 LexA repressor, DNA-binding domain Alide_1529 IPR015927 Peptidase S24/S26A/S26B/S26C Alide_1529 IPR006197 Peptidase S24, LexA-like Alide_1529 IPR039418 LexA-like Alide_1529 IPR006200 Transcription regulator LexA Alide_1529 IPR036286 LexA/Signal peptidase-like superfamily Alide_1530 IPR002514 Transposase IS3/IS911family Alide_1530 IPR009057 Homeobox-like domain superfamily Alide_1530 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1531 IPR001584 Integrase, catalytic core Alide_1531 IPR012337 Ribonuclease H-like superfamily Alide_1531 IPR036397 Ribonuclease H superfamily Alide_1531 IPR025948 HTH-like domain Alide_1532 IPR026045 Ferric binding protein Alide_1533 IPR018968 Phasin Alide_1535 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal Alide_1535 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase Alide_1535 IPR006406 Nicotinate phosphoribosyltransferase Alide_1535 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain Alide_1535 IPR007229 Nicotinate phosphoribosyltransferase family Alide_1537 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Alide_1537 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Alide_1537 IPR036291 NAD(P)-binding domain superfamily Alide_1537 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Alide_1537 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Alide_1538 IPR003798 DNA recombination RmuC Alide_1541 IPR003691 Putative fluoride ion transporter CrcB Alide_1544 IPR007208 Na(+)/H(+) antiporter subunit F-like Alide_1546 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Alide_1546 IPR004775 Na(+)/H(+) antiporter subunit D1 Alide_1547 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Alide_1547 IPR006673 Mnh complex subunit C1 Alide_1548 IPR005663 Monovalent cation proton antiporter subunit A Alide_1548 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Alide_1548 IPR025383 Domain of unknown function DUF4040 Alide_1548 IPR005281 Monovalent cation:proton antiporter, subunit B Alide_1548 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Alide_1548 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Alide_1552 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Alide_1552 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Alide_1554 IPR006008 Intracellular septation protein A Alide_1555 IPR002579 Peptide methionine sulphoxide reductase MrsB Alide_1555 IPR011057 Mss4-like superfamily Alide_1555 IPR028427 Peptide methionine sulfoxide reductase Alide_1559 IPR001851 ABC transporter, permease Alide_1561 IPR003593 AAA+ ATPase domain Alide_1561 IPR003439 ABC transporter-like Alide_1561 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1561 IPR017871 ABC transporter, conserved site Alide_1561 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Alide_1562 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1562 IPR003593 AAA+ ATPase domain Alide_1562 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_1562 IPR017871 ABC transporter, conserved site Alide_1562 IPR003439 ABC transporter-like Alide_1563 IPR012802 Fatty oxidation complex, alpha subunit FadJ Alide_1563 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal Alide_1563 IPR001753 Enoyl-CoA hydratase/isomerase Alide_1563 IPR029045 ClpP/crotonase-like domain superfamily Alide_1563 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_1563 IPR036291 NAD(P)-binding domain superfamily Alide_1563 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding Alide_1564 IPR020617 Thiolase, C-terminal Alide_1564 IPR020613 Thiolase, conserved site Alide_1564 IPR020616 Thiolase, N-terminal Alide_1564 IPR020610 Thiolase, active site Alide_1564 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_1564 IPR016039 Thiolase-like Alide_1564 IPR002155 Thiolase Alide_1565 IPR018313 Solute-binding protein family 3, conserved site Alide_1565 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Alide_1566 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Alide_1566 IPR035906 MetI-like superfamily Alide_1566 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_1567 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Alide_1567 IPR035906 MetI-like superfamily Alide_1567 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_1568 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_1568 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Alide_1568 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_1568 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_1568 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_1568 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_1568 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_1580 IPR038488 Integrase, DNA-binding domain superfamily Alide_1580 IPR025166 Integrase, DNA-binding domain Alide_1580 IPR011010 DNA breaking-rejoining enzyme, catalytic core Alide_1580 IPR013762 Integrase-like, catalytic domain superfamily Alide_1580 IPR002104 Integrase, catalytic domain Alide_1580 IPR010998 Integrase/recombinase, N-terminal Alide_1581 IPR003423 Outer membrane efflux protein Alide_1581 IPR010130 Type I secretion outer membrane protein, TolC Alide_1583 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_1583 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase Alide_1584 IPR041612 YfiR, C-terminal Alide_1584 IPR009057 Homeobox-like domain superfamily Alide_1584 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Alide_1584 IPR001647 DNA-binding HTH domain, TetR-type Alide_1585 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily Alide_1585 IPR002569 Peptide methionine sulphoxide reductase MsrA Alide_1587 IPR039426 Vitamin B12 transporter BtuB-like Alide_1587 IPR012910 TonB-dependent receptor, plug domain Alide_1587 IPR037066 TonB-dependent receptor, plug domain superfamily Alide_1587 IPR000531 TonB-dependent receptor-like, beta-barrel Alide_1591 IPR000659 Pyridoxamine 5'-phosphate oxidase Alide_1591 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal Alide_1591 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative Alide_1591 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site Alide_1591 IPR012349 FMN-binding split barrel Alide_1596 IPR003029 S1 domain Alide_1596 IPR012340 Nucleic acid-binding, OB-fold Alide_1596 IPR022967 RNA-binding domain, S1 Alide_1596 IPR012337 Ribonuclease H-like superfamily Alide_1596 IPR041692 HHH domain 9 Alide_1596 IPR010994 RuvA domain 2-like Alide_1596 IPR006641 YqgF/RNase H-like domain Alide_1596 IPR032639 Tex protein, YqgF-like domain Alide_1596 IPR023323 Tex-like domain superfamily Alide_1596 IPR023319 Tex-like protein, HTH domain superfamily Alide_1596 IPR018974 Tex-like protein, N-terminal Alide_1596 IPR037027 YqgF/RNase H-like domain superfamily Alide_1597 IPR042100 Bordetella uptake gene, domain 1 Alide_1597 IPR005064 Bordetella uptake gene Alide_1600 IPR005064 Bordetella uptake gene Alide_1600 IPR042100 Bordetella uptake gene, domain 1 Alide_1601 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_1601 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_1601 IPR036291 NAD(P)-binding domain superfamily Alide_1602 IPR042099 AMP-dependent synthetase-like superfamily Alide_1602 IPR000873 AMP-dependent synthetase/ligase Alide_1602 IPR020845 AMP-binding, conserved site Alide_1602 IPR020459 AMP-binding Alide_1602 IPR025110 AMP-binding enzyme, C-terminal domain Alide_1603 IPR042100 Bordetella uptake gene, domain 1 Alide_1603 IPR005064 Bordetella uptake gene Alide_1604 IPR028082 Periplasmic binding protein-like I Alide_1604 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Alide_1604 IPR000843 LacI-type HTH domain Alide_1606 IPR023606 CoA-transferase family III domain superfamily Alide_1606 IPR003673 CoA-transferase family III Alide_1607 IPR005064 Bordetella uptake gene Alide_1607 IPR042100 Bordetella uptake gene, domain 1 Alide_1607 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_1608 IPR042100 Bordetella uptake gene, domain 1 Alide_1608 IPR005064 Bordetella uptake gene Alide_1609 IPR032466 Metal-dependent hydrolase Alide_1609 IPR006680 Amidohydrolase-related Alide_1612 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily Alide_1612 IPR011234 Fumarylacetoacetase-like, C-terminal Alide_1612 IPR023793 2-keto-4-pentenoate hydratase Alide_1613 IPR013094 Alpha/beta hydrolase fold-3 Alide_1613 IPR029058 Alpha/Beta hydrolase fold Alide_1616 IPR011006 CheY-like superfamily Alide_1616 IPR001789 Signal transduction response regulator, receiver domain Alide_1616 IPR000792 Transcription regulator LuxR, C-terminal Alide_1616 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1617 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_1617 IPR000700 PAS-associated, C-terminal Alide_1617 IPR011006 CheY-like superfamily Alide_1617 IPR003594 Histidine kinase/HSP90-like ATPase Alide_1617 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_1617 IPR005467 Histidine kinase domain Alide_1617 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_1617 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_1617 IPR001610 PAC motif Alide_1617 IPR000014 PAS domain Alide_1617 IPR001789 Signal transduction response regulator, receiver domain Alide_1617 IPR035965 PAS domain superfamily Alide_1617 IPR013656 PAS fold-4 Alide_1618 IPR036259 MFS transporter superfamily Alide_1618 IPR004747 Cyanate transport system protein Alide_1618 IPR011701 Major facilitator superfamily Alide_1618 IPR020846 Major facilitator superfamily domain Alide_1619 IPR016192 APOBEC/CMP deaminase, zinc-binding Alide_1619 IPR002125 Cytidine and deoxycytidylate deaminase domain Alide_1619 IPR016193 Cytidine deaminase-like Alide_1620 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Alide_1620 IPR023758 tRNA-modifying protein YgfZ Alide_1620 IPR017703 YgfZ/GcvT conserved site Alide_1621 IPR003770 Endolytic murein transglycosylase Alide_1622 IPR039430 Thymidylate kinase-like domain Alide_1622 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1622 IPR018094 Thymidylate kinase Alide_1623 IPR015199 DNA polymerase III, delta subunit, C-terminal Alide_1623 IPR004622 DNA polymerase III, delta prime subunit Alide_1623 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Alide_1623 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1625 IPR018228 Deoxyribonuclease, TatD-related, conserved site Alide_1625 IPR015991 Uncharacterised hydrolase TatD-type Alide_1625 IPR032466 Metal-dependent hydrolase Alide_1625 IPR001130 TatD family Alide_1629 IPR011711 GntR, C-terminal Alide_1629 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1629 IPR000485 AsnC-type HTH domain Alide_1629 IPR008920 Transcription regulator FadR/GntR, C-terminal Alide_1629 IPR000524 Transcription regulator HTH, GntR Alide_1629 IPR036390 Winged helix DNA-binding domain superfamily Alide_1631 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Alide_1631 IPR005501 LamB/YcsF/PxpA-like Alide_1632 IPR038021 Putative hydro-lyase Alide_1632 IPR016938 Uncharacterised protein family UPF0317 Alide_1632 IPR009906 D-glutamate cyclase Alide_1633 IPR010016 KipI family Alide_1633 IPR029000 Cyclophilin-like domain superfamily Alide_1633 IPR003833 Carboxyltransferase domain, subdomain C and D Alide_1634 IPR011761 ATP-grasp fold Alide_1634 IPR000089 Biotin/lipoyl attachment Alide_1634 IPR011053 Single hybrid motif Alide_1634 IPR011054 Rudiment single hybrid motif Alide_1634 IPR001882 Biotin-binding site Alide_1634 IPR005481 Biotin carboxylase-like, N-terminal domain Alide_1634 IPR011764 Biotin carboxylation domain Alide_1634 IPR016185 Pre-ATP-grasp domain superfamily Alide_1634 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Alide_1634 IPR005482 Biotin carboxylase, C-terminal Alide_1635 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1635 IPR003593 AAA+ ATPase domain Alide_1635 IPR011527 ABC transporter type 1, transmembrane domain Alide_1635 IPR036640 ABC transporter type 1, transmembrane domain superfamily Alide_1635 IPR003439 ABC transporter-like Alide_1635 IPR017871 ABC transporter, conserved site Alide_1635 IPR011917 ABC transporter, lipid A export, MsbA Alide_1636 IPR011659 WD40-like Beta Propeller Alide_1636 IPR007195 TolB, N-terminal Alide_1636 IPR011042 Six-bladed beta-propeller, TolB-like Alide_1636 IPR014167 Tol-Pal system protein TolB Alide_1636 IPR036752 TolB, N-terminal domain superfamily Alide_1637 IPR006690 Outer membrane protein, OmpA-like, conserved site Alide_1637 IPR036737 OmpA-like domain superfamily Alide_1637 IPR039001 Peptidoglycan-associated lipoprotein Alide_1637 IPR006664 Outer membrane protein, bacterial Alide_1637 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal Alide_1637 IPR006665 OmpA-like domain Alide_1638 IPR014162 Cell division coordinator CpoB, C-terminal Alide_1638 IPR013026 Tetratricopeptide repeat-containing domain Alide_1638 IPR034706 Cell division coordinator CpoB Alide_1638 IPR032519 YbgF, trimerisation domain Alide_1638 IPR011990 Tetratricopeptide-like helical domain superfamily Alide_1638 IPR019734 Tetratricopeptide repeat Alide_1639 IPR035985 Ubiquitin-activating enzyme Alide_1639 IPR000594 THIF-type NAD/FAD binding fold Alide_1640 IPR011010 DNA breaking-rejoining enzyme, catalytic core Alide_1640 IPR013762 Integrase-like, catalytic domain superfamily Alide_1640 IPR002104 Integrase, catalytic domain Alide_1640 IPR010998 Integrase/recombinase, N-terminal Alide_1640 IPR004107 Integrase, SAM-like, N-terminal Alide_1640 IPR023009 Tyrosine recombinase XerC/XerD Alide_1640 IPR011931 Tyrosine recombinase XerC Alide_1659 IPR002071 Thermonuclease active site Alide_1659 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Alide_1659 IPR035437 SNase-like, OB-fold superfamily Alide_1669 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1669 IPR007692 DNA helicase, DnaB type Alide_1669 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Alide_1669 IPR007693 DNA helicase, DnaB-like, N-terminal Alide_1669 IPR007694 DNA helicase, DnaB-like, C-terminal Alide_1669 IPR003593 AAA+ ATPase domain Alide_1669 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily Alide_1672 IPR036614 Holliday junction resolvase RusA-like superfamily Alide_1690 IPR003488 DNA recombination-mediator protein A Alide_1715 IPR008490 Transposase InsH, N-terminal Alide_1715 IPR002559 Transposase, IS4-like Alide_1718 IPR002611 IstB-like ATP-binding protein Alide_1718 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Alide_1718 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1718 IPR001270 ClpA/B family Alide_1718 IPR003593 AAA+ ATPase domain Alide_1719 IPR001584 Integrase, catalytic core Alide_1719 IPR017894 HTH domain, IS21 transposase-type Alide_1724 IPR013762 Integrase-like, catalytic domain superfamily Alide_1724 IPR025166 Integrase, DNA-binding domain Alide_1724 IPR038488 Integrase, DNA-binding domain superfamily Alide_1724 IPR002104 Integrase, catalytic domain Alide_1724 IPR011010 DNA breaking-rejoining enzyme, catalytic core Alide_1724 IPR010998 Integrase/recombinase, N-terminal Alide_1727 IPR023346 Lysozyme-like domain superfamily Alide_1727 IPR018392 LysM domain Alide_1727 IPR008258 Transglycosylase SLT domain 1 Alide_1727 IPR000189 Prokaryotic transglycosylase, active site Alide_1727 IPR036779 LysM domain superfamily Alide_1728 IPR001279 Metallo-beta-lactamase Alide_1728 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain Alide_1728 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Alide_1728 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain Alide_1728 IPR017782 Hydroxyacylglutathione hydrolase Alide_1729 IPR013216 Methyltransferase type 11 Alide_1729 IPR026669 Arsenite methyltransferase-like Alide_1729 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_1730 IPR022892 Ribonuclease HI Alide_1730 IPR036397 Ribonuclease H superfamily Alide_1730 IPR002156 Ribonuclease H domain Alide_1730 IPR012337 Ribonuclease H-like superfamily Alide_1732 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Alide_1732 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase Alide_1732 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Alide_1733 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site Alide_1733 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Alide_1733 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Alide_1733 IPR024084 Isopropylmalate dehydrogenase-like domain Alide_1734 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1734 IPR036390 Winged helix DNA-binding domain superfamily Alide_1734 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain Alide_1734 IPR000847 Transcription regulator HTH, LysR Alide_1734 IPR005119 LysR, substrate-binding Alide_1735 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Alide_1737 IPR005064 Bordetella uptake gene Alide_1737 IPR042100 Bordetella uptake gene, domain 1 Alide_1740 IPR036135 MoeA, N-terminal and linker domain superfamily Alide_1740 IPR005110 MoeA, N-terminal and linker domain Alide_1740 IPR036688 MoeA, C-terminal, domain IV superfamily Alide_1740 IPR008284 Molybdenum cofactor biosynthesis, conserved site Alide_1740 IPR038987 Molybdopterin biosynthesis protein MoeA-like Alide_1740 IPR001453 MoaB/Mog domain Alide_1740 IPR036425 MoaB/Mog-like domain superfamily Alide_1740 IPR005111 MoeA, C-terminal, domain IV Alide_1742 IPR029044 Nucleotide-diphospho-sugar transferases Alide_1742 IPR013482 Molybdenum cofactor guanylyltransferase Alide_1742 IPR025877 MobA-like NTP transferase Alide_1743 IPR010505 Molybdenum cofactor synthesis C-terminal Alide_1743 IPR007197 Radical SAM Alide_1743 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Alide_1743 IPR013483 Molybdenum cofactor biosynthesis protein A Alide_1743 IPR006638 Elp3/MiaB/NifB Alide_1743 IPR013785 Aldolase-type TIM barrel Alide_1746 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Alide_1746 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_1746 IPR016161 Aldehyde/histidinol dehydrogenase Alide_1746 IPR015590 Aldehyde dehydrogenase domain Alide_1746 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_1746 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent Alide_1747 IPR004131 Pyrophosphate-energised proton pump Alide_1748 IPR008162 Inorganic pyrophosphatase Alide_1748 IPR036649 Inorganic pyrophosphatase superfamily Alide_1749 IPR002545 CheW-like domain Alide_1749 IPR036061 CheW-like domain superfamily Alide_1749 IPR039315 Chemotaxis protein CheW Alide_1750 IPR003660 HAMP domain Alide_1750 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Alide_1750 IPR004090 Chemotaxis methyl-accepting receptor Alide_1750 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Alide_1750 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Alide_1750 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Alide_1753 IPR000132 Nitrilase/cyanide hydratase, conserved site Alide_1753 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_1753 IPR003694 NAD(+) synthetase Alide_1753 IPR014445 Glutamine-dependent NAD(+) synthetase Alide_1753 IPR003010 Carbon-nitrogen hydrolase Alide_1753 IPR022310 NAD/GMP synthase Alide_1753 IPR036526 Carbon-nitrogen hydrolase superfamily Alide_1754 IPR017918 Nitrogen regulatory protein PII, conserved site Alide_1754 IPR002332 Nitrogen regulatory protein P-II, urydylation site Alide_1754 IPR002187 Nitrogen regulatory protein PII Alide_1754 IPR011322 Nitrogen regulatory PII-like, alpha/beta Alide_1754 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Alide_1755 IPR031100 LOG family Alide_1755 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG Alide_1756 IPR033718 Diacylglycerol kinase, prokaryotic Alide_1756 IPR036945 Diacylglycerol kinase (DAGK) superfamily Alide_1756 IPR000829 DAGK family Alide_1760 IPR039425 RNA polymerase sigma-70 like Alide_1760 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Alide_1760 IPR014284 RNA polymerase sigma-70 like domain Alide_1760 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Alide_1760 IPR007627 RNA polymerase sigma-70 region 2 Alide_1760 IPR013325 RNA polymerase sigma factor, region 2 Alide_1760 IPR013324 RNA polymerase sigma factor, region 3/4-like Alide_1760 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1761 IPR039368 Acetolactate synthase large subunit, TPP binding domain Alide_1761 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Alide_1761 IPR000399 TPP-binding enzyme, conserved site Alide_1761 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Alide_1761 IPR012000 Thiamine pyrophosphate enzyme, central domain Alide_1761 IPR029061 Thiamin diphosphate-binding fold Alide_1761 IPR029035 DHS-like NAD/FAD-binding domain superfamily Alide_1761 IPR012846 Acetolactate synthase, large subunit, biosynthetic Alide_1762 IPR039557 AHAS, ACT domain Alide_1762 IPR019455 Acetolactate synthase, small subunit, C-terminal Alide_1762 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Alide_1762 IPR004789 Acetolactate synthase, small subunit Alide_1762 IPR002912 ACT domain Alide_1763 IPR013023 Ketol-acid reductoisomerase Alide_1763 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_1763 IPR014359 Ketol-acid reductoisomerase, prokaryotic Alide_1763 IPR036291 NAD(P)-binding domain superfamily Alide_1763 IPR000506 Ketol-acid reductoisomerase, C-terminal Alide_1763 IPR013116 Ketol-acid reductoisomerase, N-terminal Alide_1764 IPR000462 CDP-alcohol phosphatidyltransferase Alide_1764 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase Alide_1765 IPR010987 Glutathione S-transferase, C-terminal-like Alide_1765 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Alide_1765 IPR040079 Glutathione Transferase family Alide_1765 IPR004045 Glutathione S-transferase, N-terminal Alide_1765 IPR005955 Glutathione S-transferases, class Zeta Alide_1765 IPR034330 Glutathione S-transferases, class Zeta , C-terminal Alide_1765 IPR034333 Glutathione S-transferases, class Zeta , N-terminal Alide_1765 IPR036249 Thioredoxin-like superfamily Alide_1767 IPR005829 Sugar transporter, conserved site Alide_1767 IPR011701 Major facilitator superfamily Alide_1767 IPR036259 MFS transporter superfamily Alide_1767 IPR020846 Major facilitator superfamily domain Alide_1769 IPR036390 Winged helix DNA-binding domain superfamily Alide_1769 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1769 IPR000847 Transcription regulator HTH, LysR Alide_1769 IPR005119 LysR, substrate-binding Alide_1770 IPR000891 Pyruvate carboxyltransferase Alide_1770 IPR005668 2-isopropylmalate synthase Alide_1770 IPR039371 LeuA, N-terminal catalytic TIM barrel domain Alide_1770 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily Alide_1770 IPR013785 Aldolase-type TIM barrel Alide_1770 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Alide_1770 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Alide_1771 IPR013785 Aldolase-type TIM barrel Alide_1771 IPR000891 Pyruvate carboxyltransferase Alide_1771 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Alide_1771 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Alide_1771 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily Alide_1771 IPR005671 2-isopropylmalate synthase, bacterial-type Alide_1772 IPR012338 Beta-lactamase/transpeptidase-like Alide_1772 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Alide_1772 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Alide_1773 IPR005471 Transcription regulator IclR, N-terminal Alide_1773 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1773 IPR036390 Winged helix DNA-binding domain superfamily Alide_1773 IPR014757 Transcription regulator IclR, C-terminal Alide_1773 IPR029016 GAF-like domain superfamily Alide_1774 IPR018212 Sodium/solute symporter, conserved site Alide_1774 IPR011851 Sodium/proline symporter Alide_1774 IPR038377 Sodium/glucose symporter superfamily Alide_1774 IPR001734 Sodium/solute symporter Alide_1775 IPR029041 FAD-linked oxidoreductase-like Alide_1775 IPR002872 Proline dehydrogenase domain Alide_1775 IPR024082 Proline dehydrogenase PutA, domain II Alide_1775 IPR016161 Aldehyde/histidinol dehydrogenase Alide_1775 IPR010985 Ribbon-helix-helix Alide_1775 IPR016160 Aldehyde dehydrogenase, cysteine active site Alide_1775 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Alide_1775 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 Alide_1775 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_1775 IPR015590 Aldehyde dehydrogenase domain Alide_1775 IPR024089 Proline dehydrogenase PutA, domain I/II Alide_1775 IPR024090 Proline dehydrogenase PutA, domain I Alide_1775 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain Alide_1775 IPR013321 Arc-type ribbon-helix-helix Alide_1775 IPR025703 Bifunctional protein PutA Alide_1775 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_1776 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_1776 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_1776 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_1776 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_1776 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_1776 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_1776 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_1778 IPR014710 RmlC-like jelly roll fold Alide_1778 IPR012318 Crp-type HTH domain Alide_1778 IPR036390 Winged helix DNA-binding domain superfamily Alide_1778 IPR000595 Cyclic nucleotide-binding domain Alide_1778 IPR018490 Cyclic nucleotide-binding-like Alide_1778 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1779 IPR029045 ClpP/crotonase-like domain superfamily Alide_1779 IPR001753 Enoyl-CoA hydratase/isomerase Alide_1779 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_1779 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB Alide_1780 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding Alide_1780 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site Alide_1780 IPR036291 NAD(P)-binding domain superfamily Alide_1780 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC Alide_1780 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal Alide_1780 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain Alide_1780 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_1782 IPR022998 Thiamine phosphate synthase/TenI Alide_1782 IPR036206 Thiamin phosphate synthase superfamily Alide_1782 IPR013785 Aldolase-type TIM barrel Alide_1782 IPR034291 Thiamine phosphate synthase Alide_1783 IPR008867 Thiazole synthase Alide_1783 IPR013785 Aldolase-type TIM barrel Alide_1783 IPR033983 Thiazole synthase ThiG Alide_1785 IPR012727 Glycine oxidase ThiO Alide_1785 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_1785 IPR006076 FAD dependent oxidoreductase Alide_1785 IPR023209 D-amino-acid oxidase Alide_1786 IPR029056 Ribokinase-like Alide_1786 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Alide_1786 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase Alide_1789 IPR022890 Ferredoxin--NADP reductase, type 2 Alide_1789 IPR023753 FAD/NAD(P)-binding domain Alide_1789 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_1790 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_1790 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Alide_1790 IPR000813 7Fe ferredoxin Alide_1790 IPR022569 Ferredoxin, C-terminal Alide_1791 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain Alide_1791 IPR009000 Translation protein, beta-barrel domain superfamily Alide_1791 IPR002891 Adenylyl-sulfate kinase Alide_1791 IPR000795 Transcription factor, GTP-binding domain Alide_1791 IPR011779 Sulphate adenylyltransferase, large subunit Alide_1791 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1791 IPR031157 Tr-type G domain, conserved site Alide_1791 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Alide_1792 IPR011784 Sulphate adenylyltransferase, small subunit Alide_1792 IPR002500 Phosphoadenosine phosphosulphate reductase Alide_1792 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_1793 IPR002500 Phosphoadenosine phosphosulphate reductase Alide_1793 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase Alide_1793 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_1793 IPR011800 Phosphoadenosine phosphosulphate reductase CysH Alide_1796 IPR002781 Transmembrane protein TauE-like Alide_1797 IPR008471 MnmC-like methyltransferase Alide_1797 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC Alide_1797 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal Alide_1797 IPR006076 FAD dependent oxidoreductase Alide_1797 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_1798 IPR005115 Uncharacterised domain UPF0126 Alide_1799 IPR007457 Fe(II) trafficking protein YggX Alide_1799 IPR036766 Fe(II) trafficking protein YggX superfamily Alide_1800 IPR034408 Sulphate/thiosulphate-binding site Alide_1800 IPR000957 Sulphate/thiosulphate-binding, conserved site Alide_1800 IPR005669 Thiosulphate/Sulfate-binding protein Alide_1804 IPR025110 AMP-binding enzyme, C-terminal domain Alide_1804 IPR020845 AMP-binding, conserved site Alide_1804 IPR000873 AMP-dependent synthetase/ligase Alide_1804 IPR042099 AMP-dependent synthetase-like superfamily Alide_1805 IPR020616 Thiolase, N-terminal Alide_1805 IPR020613 Thiolase, conserved site Alide_1805 IPR020617 Thiolase, C-terminal Alide_1805 IPR020610 Thiolase, active site Alide_1805 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_1805 IPR016039 Thiolase-like Alide_1805 IPR002155 Thiolase Alide_1805 IPR012793 Beta-ketoadipyl CoA thiolase Alide_1806 IPR036291 NAD(P)-binding domain superfamily Alide_1806 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Alide_1806 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_1806 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_1808 IPR001851 ABC transporter, permease Alide_1810 IPR017871 ABC transporter, conserved site Alide_1810 IPR003439 ABC transporter-like Alide_1810 IPR003593 AAA+ ATPase domain Alide_1810 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Alide_1810 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1811 IPR003593 AAA+ ATPase domain Alide_1811 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_1811 IPR003439 ABC transporter-like Alide_1811 IPR017871 ABC transporter, conserved site Alide_1811 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1813 IPR025110 AMP-binding enzyme, C-terminal domain Alide_1813 IPR020845 AMP-binding, conserved site Alide_1813 IPR000873 AMP-dependent synthetase/ligase Alide_1813 IPR042099 AMP-dependent synthetase-like superfamily Alide_1813 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 Alide_1814 IPR036291 NAD(P)-binding domain superfamily Alide_1814 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Alide_1814 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_1814 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_1819 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Alide_1819 IPR023346 Lysozyme-like domain superfamily Alide_1819 IPR023703 Membrane-bound lytic murein transglycosylase F Alide_1819 IPR000189 Prokaryotic transglycosylase, active site Alide_1819 IPR008258 Transglycosylase SLT domain 1 Alide_1821 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1821 IPR002514 Transposase IS3/IS911family Alide_1821 IPR009057 Homeobox-like domain superfamily Alide_1822 IPR001584 Integrase, catalytic core Alide_1822 IPR036397 Ribonuclease H superfamily Alide_1822 IPR012337 Ribonuclease H-like superfamily Alide_1822 IPR025948 HTH-like domain Alide_1826 IPR023753 FAD/NAD(P)-binding domain Alide_1826 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Alide_1826 IPR017969 Heavy-metal-associated, conserved site Alide_1826 IPR006121 Heavy metal-associated domain, HMA Alide_1826 IPR036163 Heavy metal-associated domain superfamily Alide_1826 IPR021179 Mercury(II) reductase Alide_1826 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I Alide_1826 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Alide_1826 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Alide_1826 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_1827 IPR011795 Mercuric transport protein periplasmic component Alide_1827 IPR017969 Heavy-metal-associated, conserved site Alide_1827 IPR006121 Heavy metal-associated domain, HMA Alide_1827 IPR036163 Heavy metal-associated domain superfamily Alide_1827 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ Alide_1828 IPR003457 Mercuric transport protein MerT Alide_1829 IPR009061 Putative DNA-binding domain superfamily Alide_1829 IPR011794 Hg(II)-responsive transcriptional regulator Alide_1829 IPR000551 MerR-type HTH domain Alide_1829 IPR015358 Transcription regulator MerR, DNA binding Alide_1837 IPR001584 Integrase, catalytic core Alide_1837 IPR025948 HTH-like domain Alide_1837 IPR012337 Ribonuclease H-like superfamily Alide_1837 IPR036397 Ribonuclease H superfamily Alide_1838 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1838 IPR002514 Transposase IS3/IS911family Alide_1838 IPR009057 Homeobox-like domain superfamily Alide_1840 IPR011010 DNA breaking-rejoining enzyme, catalytic core Alide_1840 IPR013762 Integrase-like, catalytic domain superfamily Alide_1840 IPR002104 Integrase, catalytic domain Alide_1840 IPR038488 Integrase, DNA-binding domain superfamily Alide_1840 IPR025166 Integrase, DNA-binding domain Alide_1840 IPR010998 Integrase/recombinase, N-terminal Alide_1840 IPR004107 Integrase, SAM-like, N-terminal Alide_1841 IPR030489 Transcription regulator Rrf2-type, conserved site Alide_1841 IPR000944 Transcription regulator Rrf2-type Alide_1841 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1841 IPR036390 Winged helix DNA-binding domain superfamily Alide_1841 IPR010242 Transcription factor HTH, IscR Alide_1844 IPR033177 Phosphatidylserine decarboxylase Alide_1844 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 Alide_1844 IPR003817 Phosphatidylserine decarboxylase-related Alide_1845 IPR003593 AAA+ ATPase domain Alide_1845 IPR003439 ABC transporter-like Alide_1845 IPR017871 ABC transporter, conserved site Alide_1845 IPR000644 CBS domain Alide_1845 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1845 IPR005892 Glycine betaine transport ATP-binding subunit Alide_1846 IPR006196 RNA-binding domain, S1, IF1 type Alide_1846 IPR004368 Translation initiation factor IF-1 Alide_1846 IPR012340 Nucleic acid-binding, OB-fold Alide_1847 IPR029787 Nucleotide cyclase Alide_1847 IPR000160 GGDEF domain Alide_1847 IPR033424 Membrane-associated sensor domain Alide_1849 IPR005685 Integration host factor, beta subunit Alide_1849 IPR000119 Histone-like DNA-binding protein Alide_1849 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily Alide_1850 IPR003029 S1 domain Alide_1850 IPR022967 RNA-binding domain, S1 Alide_1850 IPR000110 Ribosomal protein S1 Alide_1850 IPR012340 Nucleic acid-binding, OB-fold Alide_1851 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase Alide_1851 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site Alide_1851 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Alide_1851 IPR001986 Enolpyruvate transferase domain Alide_1851 IPR036968 Enolpyruvate transferase domain superfamily Alide_1852 IPR003099 Prephenate dehydrogenase Alide_1852 IPR036291 NAD(P)-binding domain superfamily Alide_1852 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_1853 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain Alide_1853 IPR018528 Prephenate dehydratase, conserved site Alide_1853 IPR002701 Chorismate mutase II, prokaryotic-type Alide_1853 IPR036979 Chorismate mutase domain superfamily Alide_1853 IPR001086 Prephenate dehydratase Alide_1853 IPR036263 Chorismate mutase type II superfamily Alide_1853 IPR002912 ACT domain Alide_1853 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase Alide_1854 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Alide_1854 IPR000192 Aminotransferase class V domain Alide_1854 IPR015424 Pyridoxal phosphate-dependent transferase Alide_1854 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_1854 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_1854 IPR022278 Phosphoserine aminotransferase Alide_1855 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta Alide_1855 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal Alide_1855 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Alide_1855 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Alide_1855 IPR005743 DNA gyrase, subunit A Alide_1855 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily Alide_1855 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat Alide_1856 IPR006664 Outer membrane protein, bacterial Alide_1856 IPR006665 OmpA-like domain Alide_1856 IPR006690 Outer membrane protein, OmpA-like, conserved site Alide_1856 IPR036737 OmpA-like domain superfamily Alide_1857 IPR010233 Ubiquinone biosynthesis O-methyltransferase Alide_1857 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_1858 IPR037512 Phosphoglycolate phosphatase, prokaryotic Alide_1858 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic Alide_1858 IPR041492 Haloacid dehalogenase-like hydrolase Alide_1858 IPR036412 HAD-like superfamily Alide_1858 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Alide_1858 IPR006439 HAD hydrolase, subfamily IA Alide_1858 IPR023214 HAD superfamily Alide_1860 IPR006197 Peptidase S24, LexA-like Alide_1860 IPR015927 Peptidase S24/S26A/S26B/S26C Alide_1860 IPR036286 LexA/Signal peptidase-like superfamily Alide_1860 IPR039418 LexA-like Alide_1861 IPR025188 Domain of unknown function DUF4113 Alide_1861 IPR001126 UmuC domain Alide_1861 IPR036775 DNA polymerase, Y-family, little finger domain superfamily Alide_1861 IPR017961 DNA polymerase, Y-family, little finger domain Alide_1864 IPR006118 Recombinase, conserved site Alide_1864 IPR006119 Resolvase, N-terminal catalytic domain Alide_1864 IPR006120 Resolvase, HTH domain Alide_1864 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Alide_1873 IPR039552 Transposase IS66, C-terminal Alide_1873 IPR024474 Zinc-finger binding domain of transposase IS66 Alide_1873 IPR024463 Transposase TnpC, homeodomain Alide_1873 IPR004291 Transposase, IS66 Alide_1874 IPR036397 Ribonuclease H superfamily Alide_1874 IPR012337 Ribonuclease H-like superfamily Alide_1874 IPR025948 HTH-like domain Alide_1874 IPR001584 Integrase, catalytic core Alide_1875 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1875 IPR002514 Transposase IS3/IS911family Alide_1875 IPR009057 Homeobox-like domain superfamily Alide_1878 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_1878 IPR006076 FAD dependent oxidoreductase Alide_1879 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1879 IPR036390 Winged helix DNA-binding domain superfamily Alide_1879 IPR000847 Transcription regulator HTH, LysR Alide_1879 IPR005119 LysR, substrate-binding Alide_1879 IPR037414 Transcriptional activator protein LysR, PBP2 domain Alide_1880 IPR015868 Glutaminase Alide_1880 IPR012338 Beta-lactamase/transpeptidase-like Alide_1881 IPR017439 Amidohydrolase Alide_1881 IPR036264 Bacterial exopeptidase dimerisation domain Alide_1881 IPR002933 Peptidase M20 Alide_1881 IPR011650 Peptidase M20, dimerisation domain Alide_1882 IPR005829 Sugar transporter, conserved site Alide_1882 IPR011701 Major facilitator superfamily Alide_1882 IPR020846 Major facilitator superfamily domain Alide_1882 IPR004736 MFS transporter, metabolite:H symporter Alide_1882 IPR036259 MFS transporter superfamily Alide_1883 IPR005119 LysR, substrate-binding Alide_1883 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1883 IPR036390 Winged helix DNA-binding domain superfamily Alide_1883 IPR000847 Transcription regulator HTH, LysR Alide_1888 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_1888 IPR036291 NAD(P)-binding domain superfamily Alide_1890 IPR041694 Oxidoreductase, N-terminal domain Alide_1890 IPR013149 Alcohol dehydrogenase, C-terminal Alide_1890 IPR011032 GroES-like superfamily Alide_1890 IPR036291 NAD(P)-binding domain superfamily Alide_1890 IPR020843 Polyketide synthase, enoylreductase domain Alide_1893 IPR011701 Major facilitator superfamily Alide_1893 IPR020846 Major facilitator superfamily domain Alide_1893 IPR036259 MFS transporter superfamily Alide_1894 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_1894 IPR006050 DNA photolyase, N-terminal Alide_1894 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Alide_1894 IPR002081 Cryptochrome/DNA photolyase class 1 Alide_1894 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Alide_1894 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Alide_1894 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Alide_1896 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal Alide_1896 IPR038071 UROD/MetE-like superfamily Alide_1896 IPR006276 Cobalamin-independent methionine synthase Alide_1896 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal Alide_1897 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1897 IPR000847 Transcription regulator HTH, LysR Alide_1897 IPR036390 Winged helix DNA-binding domain superfamily Alide_1897 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain Alide_1897 IPR005119 LysR, substrate-binding Alide_1901 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site Alide_1901 IPR040442 Pyruvate kinase-like domain superfamily Alide_1901 IPR039556 ICL/PEPM domain Alide_1901 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_1902 IPR012709 2-methyl-aconitate isomerase PrpF Alide_1902 IPR007400 PrpF protein Alide_1903 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Alide_1903 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain Alide_1903 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Alide_1903 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent Alide_1903 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain Alide_1903 IPR036008 Aconitase, iron-sulfur domain Alide_1903 IPR006249 Aconitase/Iron-responsive element-binding protein 2 Alide_1904 IPR002020 Citrate synthase Alide_1904 IPR019810 Citrate synthase active site Alide_1904 IPR024176 Citrate synthase, bacterial-type Alide_1904 IPR036969 Citrate synthase superfamily Alide_1904 IPR016143 Citrate synthase-like, small alpha subdomain Alide_1904 IPR011278 2-methylcitrate synthase/citrate synthase type I Alide_1904 IPR016142 Citrate synthase-like, large alpha subdomain Alide_1906 IPR026281 HTH-type transcriptional regulator RamB Alide_1906 IPR018653 Domain of unknown function DUF2083,transcriptional regulator Alide_1906 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Alide_1906 IPR001387 Cro/C1-type helix-turn-helix domain Alide_1906 IPR010359 IrrE N-terminal-like domain Alide_1908 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Alide_1908 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Alide_1908 IPR037523 Vicinal oxygen chelate (VOC) domain Alide_1910 IPR036986 RNA-binding S4 domain superfamily Alide_1910 IPR025708 Heat shock protein 15 Alide_1910 IPR002942 RNA-binding S4 domain Alide_1911 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_1911 IPR003594 Histidine kinase/HSP90-like ATPase Alide_1911 IPR003660 HAMP domain Alide_1911 IPR013727 Two-component sensor kinase, N-terminal Alide_1911 IPR005467 Histidine kinase domain Alide_1911 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_1911 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_1911 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_1912 IPR011006 CheY-like superfamily Alide_1912 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_1912 IPR016032 Signal transduction response regulator, C-terminal effector Alide_1912 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1912 IPR039420 Transcriptional regulatory protein WalR-like Alide_1912 IPR001789 Signal transduction response regulator, receiver domain Alide_1913 IPR042100 Bordetella uptake gene, domain 1 Alide_1913 IPR005064 Bordetella uptake gene Alide_1915 IPR002823 Protein of unknown function DUF112, transmembrane Alide_1916 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative Alide_1921 IPR019772 Ferrochelatase, active site Alide_1921 IPR033644 Ferrochelatase, C-terminal Alide_1921 IPR033659 Ferrochelatase, N-terminal Alide_1921 IPR001015 Ferrochelatase Alide_1922 IPR041492 Haloacid dehalogenase-like hydrolase Alide_1922 IPR006439 HAD hydrolase, subfamily IA Alide_1922 IPR036412 HAD-like superfamily Alide_1922 IPR023214 HAD superfamily Alide_1923 IPR018303 P-type ATPase, phosphorylation site Alide_1923 IPR036412 HAD-like superfamily Alide_1923 IPR006068 Cation-transporting P-type ATPase, C-terminal Alide_1923 IPR023299 P-type ATPase, cytoplasmic domain N Alide_1923 IPR023298 P-type ATPase, transmembrane domain superfamily Alide_1923 IPR023214 HAD superfamily Alide_1923 IPR004014 Cation-transporting P-type ATPase, N-terminal Alide_1923 IPR008250 P-type ATPase, A domain superfamily Alide_1923 IPR001757 P-type ATPase Alide_1925 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase Alide_1925 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Alide_1925 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_1925 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_1925 IPR015424 Pyridoxal phosphate-dependent transferase Alide_1927 IPR000453 Chorismate synthase Alide_1927 IPR035904 Chorismate synthase AroC superfamily Alide_1927 IPR020541 Chorismate synthase, conserved site Alide_1928 IPR005144 ATP-cone domain Alide_1928 IPR003796 Ribonucleotide reductase regulator NrdR-like Alide_1929 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_1929 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site Alide_1929 IPR001085 Serine hydroxymethyltransferase Alide_1929 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_1929 IPR015424 Pyridoxal phosphate-dependent transferase Alide_1929 IPR039429 Serine hydroxymethyltransferase-like domain Alide_1930 IPR008258 Transglycosylase SLT domain 1 Alide_1930 IPR000189 Prokaryotic transglycosylase, active site Alide_1930 IPR024570 Murein transglycosylase-C, N-terminal Alide_1930 IPR023346 Lysozyme-like domain superfamily Alide_1930 IPR023664 Murein transglycosylase-C Alide_1933 IPR012340 Nucleic acid-binding, OB-fold Alide_1933 IPR003029 S1 domain Alide_1933 IPR022967 RNA-binding domain, S1 Alide_1933 IPR013668 Ribonuclease R winged-helix domain Alide_1933 IPR011805 Ribonuclease R Alide_1933 IPR004476 Ribonuclease II/ribonuclease R Alide_1933 IPR022966 Ribonuclease II/R, conserved site Alide_1933 IPR001900 Ribonuclease II/R Alide_1933 IPR011129 Cold shock domain Alide_1933 IPR040476 RNase II/RNase R, cold shock domain Alide_1933 IPR013223 Ribonuclease B, N-terminal OB domain Alide_1934 IPR036291 NAD(P)-binding domain superfamily Alide_1934 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_1934 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_1936 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding Alide_1936 IPR036909 Cytochrome c-like domain superfamily Alide_1936 IPR009056 Cytochrome c-like domain Alide_1936 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily Alide_1936 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Alide_1936 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Alide_1937 IPR017937 Thioredoxin, conserved site Alide_1937 IPR005746 Thioredoxin Alide_1937 IPR036249 Thioredoxin-like superfamily Alide_1937 IPR013766 Thioredoxin domain Alide_1938 IPR028989 Ribosome maturation factor RimP, N-terminal Alide_1938 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Alide_1938 IPR028998 Ribosome maturation factor RimP, C-terminal Alide_1938 IPR003728 Ribosome maturation factor RimP Alide_1938 IPR035956 RimP, N-terminal domain superfamily Alide_1939 IPR012340 Nucleic acid-binding, OB-fold Alide_1939 IPR010213 Transcription termination factor NusA Alide_1939 IPR015946 K homology domain-like, alpha/beta Alide_1939 IPR036555 NusA, N-terminal domain superfamily Alide_1939 IPR010214 Transcription termination factor NusA, C-terminal duplication Alide_1939 IPR013735 Transcription factor NusA, N-terminal Alide_1939 IPR025249 KH domain, NusA-like Alide_1939 IPR003029 S1 domain Alide_1939 IPR022967 RNA-binding domain, S1 Alide_1939 IPR030842 Transcription termination/antitermination protein NusA, bacterial Alide_1939 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical Alide_1939 IPR009019 K homology domain superfamily, prokaryotic type Alide_1940 IPR015760 Translation initiation factor IF- 2 Alide_1940 IPR023115 Translation initiation factor IF- 2, domain 3 Alide_1940 IPR000178 Translation initiation factor aIF-2, bacterial-like Alide_1940 IPR000795 Transcription factor, GTP-binding domain Alide_1940 IPR005225 Small GTP-binding protein domain Alide_1940 IPR006847 Translation initiation factor IF-2, N-terminal Alide_1940 IPR013575 Initiation factor 2 associated domain, bacterial Alide_1940 IPR009061 Putative DNA-binding domain superfamily Alide_1940 IPR009000 Translation protein, beta-barrel domain superfamily Alide_1940 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1940 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Alide_1941 IPR023799 Ribosome-binding factor A domain superfamily Alide_1941 IPR000238 Ribosome-binding factor A Alide_1941 IPR015946 K homology domain-like, alpha/beta Alide_1942 IPR020103 Pseudouridine synthase, catalytic domain superfamily Alide_1942 IPR032819 tRNA pseudouridylate synthase B, C-terminal Alide_1942 IPR014780 tRNA pseudouridine synthase II, TruB Alide_1942 IPR002501 Pseudouridine synthase II, N-terminal Alide_1945 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_1945 IPR001753 Enoyl-CoA hydratase/isomerase Alide_1945 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_1945 IPR029045 ClpP/crotonase-like domain superfamily Alide_1947 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Alide_1947 IPR014284 RNA polymerase sigma-70 like domain Alide_1947 IPR007627 RNA polymerase sigma-70 region 2 Alide_1947 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Alide_1947 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1947 IPR039425 RNA polymerase sigma-70 like Alide_1947 IPR013325 RNA polymerase sigma factor, region 2 Alide_1947 IPR013324 RNA polymerase sigma factor, region 3/4-like Alide_1949 IPR020081 SsrA-binding protein, conserved site Alide_1949 IPR000037 SsrA-binding protein Alide_1949 IPR023620 Small protein B Alide_1950 IPR023393 START-like domain superfamily Alide_1950 IPR005031 Coenzyme Q-binding protein COQ10, START domain Alide_1951 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Alide_1951 IPR037021 RnfH superfamily Alide_1951 IPR005346 RnfH protein Alide_1953 IPR015875 IMP dehydrogenase / GMP reductase, conserved site Alide_1953 IPR005990 Inosine-5'-monophosphate dehydrogenase Alide_1953 IPR001093 IMP dehydrogenase/GMP reductase Alide_1953 IPR013785 Aldolase-type TIM barrel Alide_1953 IPR000644 CBS domain Alide_1954 IPR017926 Glutamine amidotransferase Alide_1954 IPR004739 GMP synthase, glutamine amidotransferase Alide_1954 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_1954 IPR022955 GMP synthase Alide_1954 IPR025777 GMP synthetase ATP pyrophosphatase domain Alide_1954 IPR022310 NAD/GMP synthase Alide_1954 IPR029062 Class I glutamine amidotransferase-like Alide_1954 IPR001674 GMP synthase, C-terminal Alide_1955 IPR002104 Integrase, catalytic domain Alide_1955 IPR025166 Integrase, DNA-binding domain Alide_1955 IPR011010 DNA breaking-rejoining enzyme, catalytic core Alide_1955 IPR013762 Integrase-like, catalytic domain superfamily Alide_1955 IPR010998 Integrase/recombinase, N-terminal Alide_1955 IPR038488 Integrase, DNA-binding domain superfamily Alide_1956 IPR010953 Citrate synthase, type I Alide_1956 IPR002020 Citrate synthase Alide_1956 IPR024176 Citrate synthase, bacterial-type Alide_1956 IPR036969 Citrate synthase superfamily Alide_1956 IPR016142 Citrate synthase-like, large alpha subdomain Alide_1956 IPR019810 Citrate synthase active site Alide_1956 IPR016143 Citrate synthase-like, small alpha subdomain Alide_1957 IPR036714 Flavinator of succinate dehydrogenase superfamily Alide_1957 IPR005631 Flavinator of succinate dehydrogenase Alide_1958 IPR009051 Alpha-helical ferredoxin Alide_1958 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal Alide_1958 IPR036010 2Fe-2S ferredoxin-like superfamily Alide_1958 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Alide_1958 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein Alide_1958 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_1958 IPR012675 Beta-grasp domain superfamily Alide_1958 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Alide_1959 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily Alide_1959 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site Alide_1959 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Alide_1959 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_1959 IPR011281 Succinate dehydrogenase, flavoprotein subunit Alide_1959 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Alide_1959 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Alide_1959 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal Alide_1960 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor Alide_1960 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit Alide_1960 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit Alide_1961 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit Alide_1961 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site Alide_1961 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit Alide_1961 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit Alide_1962 IPR036390 Winged helix DNA-binding domain superfamily Alide_1962 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1962 IPR011663 UbiC transcription regulator-associated Alide_1962 IPR000524 Transcription regulator HTH, GntR Alide_1962 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Alide_1963 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Alide_1963 IPR001236 Lactate/malate dehydrogenase, N-terminal Alide_1963 IPR022383 Lactate/malate dehydrogenase, C-terminal Alide_1963 IPR001557 L-lactate/malate dehydrogenase Alide_1963 IPR010945 Malate dehydrogenase, type 2 Alide_1963 IPR036291 NAD(P)-binding domain superfamily Alide_1964 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal Alide_1964 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_1964 IPR023506 Trans-aconitate 2-methyltransferase Alide_1966 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Alide_1966 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain Alide_1966 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Alide_1966 IPR015933 Aconitase B, HEAT-like domain Alide_1966 IPR004406 Aconitase B Alide_1966 IPR036008 Aconitase, iron-sulfur domain Alide_1966 IPR015932 Aconitase, domain 2 Alide_1966 IPR015929 Aconitase B, swivel Alide_1966 IPR036288 Aconitase B, HEAT-like domain superfamily Alide_1966 IPR018136 Aconitase family, 4Fe-4S cluster binding site Alide_1967 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain Alide_1967 IPR005119 LysR, substrate-binding Alide_1967 IPR000847 Transcription regulator HTH, LysR Alide_1967 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_1967 IPR036390 Winged helix DNA-binding domain superfamily Alide_1968 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_1968 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_1968 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_1968 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_1968 IPR034184 Putative acyl-CoA dehydrogenase AidB Alide_1968 IPR041504 Adaptive response protein AidB, N-terminal Alide_1968 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_1969 IPR005064 Bordetella uptake gene Alide_1969 IPR042100 Bordetella uptake gene, domain 1 Alide_1970 IPR003673 CoA-transferase family III Alide_1970 IPR023606 CoA-transferase family III domain superfamily Alide_1971 IPR023753 FAD/NAD(P)-binding domain Alide_1971 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Alide_1971 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Alide_1971 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Alide_1971 IPR006322 Glutathione reductase, eukaryote/bacterial Alide_1971 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_1971 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I Alide_1972 IPR012675 Beta-grasp domain superfamily Alide_1972 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Alide_1972 IPR036010 2Fe-2S ferredoxin-like superfamily Alide_1972 IPR036884 [2Fe-2S]-binding domain superfamily Alide_1972 IPR002888 [2Fe-2S]-binding Alide_1973 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Alide_1973 IPR012780 Carbon-monoxide dehydrogenase, large subunit Alide_1973 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Alide_1973 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily Alide_1973 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding Alide_1974 IPR005107 CO dehydrogenase flavoprotein, C-terminal Alide_1974 IPR036318 FAD-binding, type PCMH-like superfamily Alide_1974 IPR016167 FAD-binding, type PCMH, subdomain 1 Alide_1974 IPR016169 FAD-binding, type PCMH, subdomain 2 Alide_1974 IPR002346 Molybdopterin dehydrogenase, FAD-binding Alide_1974 IPR016166 FAD-binding domain, PCMH-type Alide_1974 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Alide_1975 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_1975 IPR008269 Peptidase S16, Lon proteolytic domain Alide_1975 IPR004815 Lon protease, bacterial/eukaryotic-type Alide_1975 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Alide_1975 IPR027543 Lon protease, bacterial Alide_1975 IPR003959 ATPase, AAA-type, core Alide_1975 IPR003111 Lon, substrate-binding domain Alide_1975 IPR027065 Lon protease Alide_1975 IPR003593 AAA+ ATPase domain Alide_1975 IPR008268 Peptidase S16, active site Alide_1975 IPR015947 PUA-like superfamily Alide_1975 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_1978 IPR027051 XdhC Rossmann domain Alide_1978 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family Alide_1978 IPR003777 XdhC- CoxI Alide_1979 IPR029044 Nucleotide-diphospho-sugar transferases Alide_1979 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase Alide_1979 IPR011004 Trimeric LpxA-like superfamily Alide_1979 IPR001451 Hexapeptide repeat Alide_1979 IPR038009 GlmU, C-terminal LbH domain Alide_1979 IPR025877 MobA-like NTP transferase Alide_1984 IPR029044 Nucleotide-diphospho-sugar transferases Alide_1984 IPR001173 Glycosyltransferase 2-like Alide_1989 IPR001789 Signal transduction response regulator, receiver domain Alide_1989 IPR011006 CheY-like superfamily Alide_1990 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_1990 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_1990 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_1990 IPR003594 Histidine kinase/HSP90-like ATPase Alide_1990 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_1990 IPR005467 Histidine kinase domain Alide_1992 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes Alide_1992 IPR014210 Cytochrome o ubiquinol oxidase subunit IV Alide_1993 IPR024791 Cytochrome c oxidase subunit III Alide_1993 IPR014206 Cytochrome o ubiquinol oxidase, subunit III Alide_1993 IPR000298 Cytochrome c oxidase subunit III-like Alide_1993 IPR035973 Cytochrome c oxidase subunit III-like superfamily Alide_1993 IPR033946 Ubiquinol oxidase subunit III domain Alide_1993 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle Alide_1994 IPR036927 Cytochrome c oxidase-like, subunit I superfamily Alide_1994 IPR023616 Cytochrome c oxidase-like, subunit I domain Alide_1994 IPR014207 Cytochrome o ubiquinol oxidase, subunit I Alide_1994 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site Alide_1994 IPR000883 Cytochrome c oxidase subunit I Alide_1995 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain Alide_1995 IPR008972 Cupredoxin Alide_1995 IPR002429 Cytochrome c oxidase subunit II-like C-terminal Alide_1995 IPR010514 COX aromatic rich motif Alide_1995 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain Alide_1995 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Alide_1995 IPR006333 Cytochrome o ubiquinol oxidase subunit II Alide_1996 IPR036259 MFS transporter superfamily Alide_1996 IPR005829 Sugar transporter, conserved site Alide_1996 IPR004736 MFS transporter, metabolite:H symporter Alide_1996 IPR005828 Major facilitator, sugar transporter-like Alide_1996 IPR020846 Major facilitator superfamily domain Alide_1996 IPR011701 Major facilitator superfamily Alide_1998 IPR003400 Biopolymer transport protein ExbD/TolR Alide_1999 IPR014163 Tol-Pal system, TolQ Alide_1999 IPR002898 MotA/TolQ/ExbB proton channel Alide_2000 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family Alide_2000 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site Alide_2000 IPR006683 Thioesterase domain Alide_2000 IPR029069 HotDog domain superfamily Alide_2000 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase Alide_2001 IPR015424 Pyridoxal phosphate-dependent transferase Alide_2001 IPR004839 Aminotransferase, class I/classII Alide_2001 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_2001 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Alide_2001 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_2002 IPR011605 NusB antitermination factor Alide_2002 IPR006027 NusB/RsmB/TIM44 Alide_2002 IPR035926 NusB-like superfamily Alide_2003 IPR002180 Lumazine/riboflavin synthase Alide_2003 IPR034964 Lumazine synthase Alide_2003 IPR036467 Lumazine/riboflavin synthase superfamily Alide_2004 IPR036144 RibA-like superfamily Alide_2004 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Alide_2004 IPR032677 GTP cyclohydrolase II Alide_2004 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB Alide_2007 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_2007 IPR036291 NAD(P)-binding domain superfamily Alide_2007 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_2008 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Alide_2008 IPR007370 Glutamate--cysteine ligase Alide_2008 IPR006334 Glutamate--cysteine ligase, monofunctional Alide_2009 IPR032692 Integral membrane protein YccS, N-terminal Alide_2011 IPR019897 RidA, conserved site Alide_2011 IPR035959 RutC-like superfamily Alide_2011 IPR006175 YjgF/YER057c/UK114 family Alide_2011 IPR035709 RutC family, YoaB-like Alide_2012 IPR007419 BFD-like [2Fe-2S]-binding domain Alide_2012 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily Alide_2012 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2012 IPR023753 FAD/NAD(P)-binding domain Alide_2012 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B Alide_2014 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2014 IPR006076 FAD dependent oxidoreductase Alide_2015 IPR042100 Bordetella uptake gene, domain 1 Alide_2015 IPR005064 Bordetella uptake gene Alide_2016 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2016 IPR037424 Regulatory protein NocR, PBP2 domain Alide_2016 IPR005119 LysR, substrate-binding Alide_2016 IPR036390 Winged helix DNA-binding domain superfamily Alide_2016 IPR000847 Transcription regulator HTH, LysR Alide_2017 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain Alide_2017 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily Alide_2017 IPR019991 GTP-binding protein, ribosome biogenesis Alide_2017 IPR006073 GTP binding domain Alide_2017 IPR016478 GTPase, MTG1 Alide_2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2019 IPR020103 Pseudouridine synthase, catalytic domain superfamily Alide_2019 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Alide_2019 IPR006145 Pseudouridine synthase, RsuA/RluA Alide_2023 IPR035437 SNase-like, OB-fold superfamily Alide_2023 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Alide_2023 IPR002071 Thermonuclease active site Alide_2024 IPR000620 EamA domain Alide_2024 IPR004626 RarD protein Alide_2025 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Alide_2025 IPR020103 Pseudouridine synthase, catalytic domain superfamily Alide_2025 IPR006145 Pseudouridine synthase, RsuA/RluA Alide_2025 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Alide_2025 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain Alide_2027 IPR022761 Fumarate lyase, N-terminal Alide_2027 IPR008948 L-Aspartase-like Alide_2027 IPR004708 Aspartate ammonia-lyase Alide_2027 IPR024083 Fumarase/histidase, N-terminal Alide_2027 IPR000362 Fumarate lyase family Alide_2027 IPR018951 Fumarase C, C-terminal Alide_2027 IPR020557 Fumarate lyase, conserved site Alide_2030 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain Alide_2030 IPR022861 Glutamine-tRNA ligase, bacterial Alide_2030 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Alide_2030 IPR004514 Glutamine-tRNA synthetase Alide_2030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_2030 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily Alide_2030 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Alide_2030 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Alide_2030 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Alide_2030 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily Alide_2032 IPR001874 Dehydroquinase, class II Alide_2032 IPR018509 Dehydroquinase, class II, conserved site Alide_2032 IPR036441 Dehydroquinase, class II superfamily Alide_2034 IPR000352 Peptide chain release factor class I Alide_2035 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type Alide_2035 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B Alide_2036 IPR029058 Alpha/Beta hydrolase fold Alide_2036 IPR003140 Phospholipase/carboxylesterase/thioesterase Alide_2038 IPR019888 Transcription regulator AsnC-type Alide_2038 IPR036390 Winged helix DNA-binding domain superfamily Alide_2038 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2038 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Alide_2038 IPR011008 Dimeric alpha-beta barrel Alide_2038 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Alide_2038 IPR000485 AsnC-type HTH domain Alide_2039 IPR041621 Pyruvate dehydrogenase E1 component, middle domain Alide_2039 IPR005474 Transketolase, N-terminal Alide_2039 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Alide_2039 IPR004660 Pyruvate dehydrogenase E1 component Alide_2039 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal Alide_2039 IPR029061 Thiamin diphosphate-binding fold Alide_2040 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit Alide_2040 IPR036928 Amidase signature (AS) superfamily Alide_2040 IPR000120 Amidase Alide_2040 IPR023631 Amidase signature domain Alide_2040 IPR020556 Amidase, conserved site Alide_2041 IPR042100 Bordetella uptake gene, domain 1 Alide_2041 IPR005064 Bordetella uptake gene Alide_2044 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily Alide_2044 IPR020816 Histone-like DNA-binding protein, conserved site Alide_2044 IPR000119 Histone-like DNA-binding protein Alide_2078 IPR009279 Protein of unknown function DUF935 Alide_2079 IPR006528 Phage head morphogenesis domain Alide_2083 IPR018774 Bacteriophage Mu, GpT Alide_2091 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal Alide_2104 IPR005064 Bordetella uptake gene Alide_2104 IPR042100 Bordetella uptake gene, domain 1 Alide_2105 IPR005119 LysR, substrate-binding Alide_2105 IPR000847 Transcription regulator HTH, LysR Alide_2105 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2105 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain Alide_2105 IPR036390 Winged helix DNA-binding domain superfamily Alide_2106 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2106 IPR036390 Winged helix DNA-binding domain superfamily Alide_2106 IPR000524 Transcription regulator HTH, GntR Alide_2106 IPR008920 Transcription regulator FadR/GntR, C-terminal Alide_2106 IPR011711 GntR, C-terminal Alide_2107 IPR036259 MFS transporter superfamily Alide_2107 IPR020846 Major facilitator superfamily domain Alide_2107 IPR011701 Major facilitator superfamily Alide_2108 IPR036291 NAD(P)-binding domain superfamily Alide_2108 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_2108 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Alide_2108 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Alide_2108 IPR015815 3-hydroxyisobutyrate dehydrogenase-related Alide_2108 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Alide_2109 IPR036291 NAD(P)-binding domain superfamily Alide_2109 IPR001509 NAD-dependent epimerase/dehydratase Alide_2110 IPR042213 Nucleotide-binding, C-terminal domain superfamily Alide_2110 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily Alide_2110 IPR031475 Nucleotide-binding C-terminal domain Alide_2110 IPR010737 Four-carbon acid sugar kinase, N-terminal domain Alide_2111 IPR001303 Class II aldolase/adducin N-terminal Alide_2111 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Alide_2112 IPR036237 Xylose isomerase-like superfamily Alide_2112 IPR026040 Hydroxypyruvate isomerase-like Alide_2112 IPR013022 Xylose isomerase-like, TIM barrel domain Alide_2113 IPR010384 MtfA family Alide_2113 IPR024079 Metallopeptidase, catalytic domain superfamily Alide_2113 IPR042252 MtfA, N-terminal Alide_2114 IPR010138 UDP-2,3-diacylglucosamine hydrolase Alide_2114 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Alide_2115 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain Alide_2115 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site Alide_2115 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase Alide_2115 IPR029000 Cyclophilin-like domain superfamily Alide_2116 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase Alide_2116 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site Alide_2116 IPR029000 Cyclophilin-like domain superfamily Alide_2116 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain Alide_2119 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Alide_2119 IPR032678 tRNA synthetases class I, catalytic domain Alide_2119 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_2119 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase Alide_2119 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR Alide_2119 IPR015803 Cysteine-tRNA ligase Alide_2121 IPR029045 ClpP/crotonase-like domain superfamily Alide_2121 IPR001095 Acetyl-CoA carboxylase, alpha subunit Alide_2121 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal Alide_2122 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain Alide_2122 IPR012094 tRNA(Ile)-lysidine synthase Alide_2122 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Alide_2122 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_2122 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal Alide_2123 IPR036393 Acetylglutamate kinase-like superfamily Alide_2123 IPR002912 ACT domain Alide_2123 IPR001048 Aspartate/glutamate/uridylate kinase Alide_2123 IPR041740 Aspartokinase catalytic domain Alide_2123 IPR001341 Aspartate kinase Alide_2123 IPR018042 Aspartate kinase, conserved site Alide_2123 IPR027795 CASTOR, ACT domain Alide_2123 IPR005260 Aspartate kinase, monofunctional class Alide_2124 IPR023861 Chloride channel, ClcA Alide_2124 IPR014743 Chloride channel, core Alide_2124 IPR001807 Chloride channel, voltage gated Alide_2126 IPR036397 Ribonuclease H superfamily Alide_2126 IPR012337 Ribonuclease H-like superfamily Alide_2126 IPR001584 Integrase, catalytic core Alide_2126 IPR025948 HTH-like domain Alide_2127 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2127 IPR002514 Transposase IS3/IS911family Alide_2127 IPR009057 Homeobox-like domain superfamily Alide_2130 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2130 IPR011924 Lipoprotein releasing system, ATP-binding protein Alide_2130 IPR015854 ABC transporter, lipoprotein release, LolD Alide_2130 IPR017871 ABC transporter, conserved site Alide_2130 IPR003439 ABC transporter-like Alide_2130 IPR003593 AAA+ ATPase domain Alide_2131 IPR011757 Lytic transglycosylase MltB Alide_2131 IPR031304 Transglycosylase SLT domain 2 Alide_2131 IPR023346 Lysozyme-like domain superfamily Alide_2132 IPR012337 Ribonuclease H-like superfamily Alide_2132 IPR036397 Ribonuclease H superfamily Alide_2132 IPR038649 Exonuclease I, SH3-like domain superfamily Alide_2132 IPR023607 Exodeoxyribonuclease I Alide_2132 IPR034748 Exonuclease I, C-terminal alpha-helical domain Alide_2132 IPR013520 Exonuclease, RNase T/DNA polymerase III Alide_2132 IPR034747 Exonuclease I, SH3-like domain Alide_2132 IPR013620 Exodeoxyribonuclease I, C-terminal Alide_2133 IPR003000 Sirtuin family Alide_2133 IPR029035 DHS-like NAD/FAD-binding domain superfamily Alide_2133 IPR026587 Sirtuin, class II Alide_2133 IPR026590 Sirtuin family, catalytic core domain Alide_2133 IPR026591 Sirtuin, catalytic core small domain superfamily Alide_2134 IPR002549 Transmembrane protein TqsA-like Alide_2135 IPR000182 GNAT domain Alide_2135 IPR016181 Acyl-CoA N-acyltransferase Alide_2136 IPR000836 Phosphoribosyltransferase domain Alide_2136 IPR034332 Uracil phosphoribosyltransferase, bacterial-type Alide_2136 IPR029057 Phosphoribosyltransferase-like Alide_2136 IPR005765 Uracil phosphoribosyl transferase Alide_2137 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Alide_2137 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Alide_2137 IPR001926 Pyridoxal-phosphate dependent enzyme Alide_2138 IPR029072 YebC-like Alide_2138 IPR026564 Transcriptional regulator TACO1-like, domain 3 Alide_2138 IPR002876 Transcriptional regulator TACO1-like Alide_2138 IPR017856 Integrase-like, N-terminal Alide_2140 IPR032879 FixG, C-terminal immunoglobulin-like domain Alide_2140 IPR013783 Immunoglobulin-like fold Alide_2140 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_2140 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Alide_2140 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG Alide_2141 IPR002585 Cytochrome ubiquinol oxidase subunit 1 Alide_2142 IPR003317 Cytochrome ubiquinol oxidase subunit 2 Alide_2144 IPR007300 CidB/LrgB family Alide_2146 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_2146 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_2146 IPR036390 Winged helix DNA-binding domain superfamily Alide_2146 IPR000524 Transcription regulator HTH, GntR Alide_2146 IPR015424 Pyridoxal phosphate-dependent transferase Alide_2146 IPR004839 Aminotransferase, class I/classII Alide_2146 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2147 IPR036249 Thioredoxin-like superfamily Alide_2147 IPR004046 Glutathione S-transferase, C-terminal Alide_2147 IPR010987 Glutathione S-transferase, C-terminal-like Alide_2147 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Alide_2147 IPR004045 Glutathione S-transferase, N-terminal Alide_2148 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2148 IPR033186 Helicase HerA-like C-terminal Alide_2149 IPR017856 Integrase-like, N-terminal Alide_2149 IPR002876 Transcriptional regulator TACO1-like Alide_2149 IPR026564 Transcriptional regulator TACO1-like, domain 3 Alide_2149 IPR029072 YebC-like Alide_2150 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal Alide_2150 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily Alide_2150 IPR020560 Phosphoribosylglycinamide synthetase, C-domain Alide_2150 IPR000115 Phosphoribosylglycinamide synthetase Alide_2150 IPR011054 Rudiment single hybrid motif Alide_2150 IPR016185 Pre-ATP-grasp domain superfamily Alide_2150 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Alide_2150 IPR013815 ATP-grasp fold, subdomain 1 Alide_2150 IPR011761 ATP-grasp fold Alide_2151 IPR001260 Coproporphyrinogen III oxidase, aerobic Alide_2151 IPR018375 Coproporphyrinogen III oxidase, conserved site Alide_2151 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily Alide_2152 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Alide_2153 IPR003742 RNA methyltransferase RlmH Alide_2153 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Alide_2153 IPR029028 Alpha/beta knot methyltransferases Alide_2154 IPR029001 Inosine triphosphate pyrophosphatase-like Alide_2154 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein Alide_2158 IPR040523 AsnC-like ligand binding domain Alide_2159 IPR000485 AsnC-type HTH domain Alide_2159 IPR040523 AsnC-like ligand binding domain Alide_2159 IPR019888 Transcription regulator AsnC-type Alide_2159 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Alide_2159 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2160 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily Alide_2160 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Alide_2161 IPR009056 Cytochrome c-like domain Alide_2161 IPR036909 Cytochrome c-like domain superfamily Alide_2162 IPR009056 Cytochrome c-like domain Alide_2162 IPR036909 Cytochrome c-like domain superfamily Alide_2162 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily Alide_2162 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Alide_2163 IPR028281 Siroheme synthase, central domain Alide_2163 IPR014776 Tetrapyrrole methylase, subdomain 2 Alide_2163 IPR037115 Sirohaem synthase, dimerisation domain superfamily Alide_2163 IPR014777 Tetrapyrrole methylase, subdomain 1 Alide_2163 IPR035996 Tetrapyrrole methylase superfamily Alide_2163 IPR000878 Tetrapyrrole methylase Alide_2163 IPR012409 Sirohaem synthase Alide_2163 IPR006366 Uroporphyrin-III C-methyltransferase Alide_2163 IPR036291 NAD(P)-binding domain superfamily Alide_2163 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Alide_2163 IPR019478 Sirohaem synthase, dimerisation domain Alide_2163 IPR006367 Sirohaem synthase, N-terminal Alide_2164 IPR003029 S1 domain Alide_2164 IPR022967 RNA-binding domain, S1 Alide_2164 IPR004659 Ribonuclease E/G Alide_2164 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G Alide_2164 IPR012340 Nucleic acid-binding, OB-fold Alide_2165 IPR000160 GGDEF domain Alide_2165 IPR007894 MASE2 Alide_2165 IPR029787 Nucleotide cyclase Alide_2167 IPR015424 Pyridoxal phosphate-dependent transferase Alide_2167 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_2167 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_2167 IPR004839 Aminotransferase, class I/classII Alide_2168 IPR005119 LysR, substrate-binding Alide_2168 IPR036390 Winged helix DNA-binding domain superfamily Alide_2168 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2168 IPR000847 Transcription regulator HTH, LysR Alide_2168 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain Alide_2172 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B Alide_2172 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal Alide_2172 IPR023042 Peptidase M17, leucine aminopeptidase Alide_2172 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal Alide_2175 IPR000709 Leu/Ile/Val-binding protein Alide_2175 IPR028081 Leucine-binding protein domain Alide_2175 IPR028082 Periplasmic binding protein-like I Alide_2176 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Alide_2176 IPR036291 NAD(P)-binding domain superfamily Alide_2176 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Alide_2176 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Alide_2182 IPR006016 UspA Alide_2182 IPR006015 Universal stress protein A family Alide_2182 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_2183 IPR012827 Haemerythrin, metal-binding domain Alide_2183 IPR023504 Bacteriohemerythrin-like protein Alide_2183 IPR012312 Haemerythrin-like Alide_2183 IPR016131 Haemerythrin, iron-binding site Alide_2183 IPR035938 Hemerythrin-like superfamily Alide_2184 IPR005064 Bordetella uptake gene Alide_2184 IPR042100 Bordetella uptake gene, domain 1 Alide_2185 IPR020616 Thiolase, N-terminal Alide_2185 IPR020617 Thiolase, C-terminal Alide_2185 IPR020610 Thiolase, active site Alide_2185 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_2185 IPR016039 Thiolase-like Alide_2185 IPR002155 Thiolase Alide_2186 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_2186 IPR036291 NAD(P)-binding domain superfamily Alide_2186 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_2187 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Alide_2187 IPR020103 Pseudouridine synthase, catalytic domain superfamily Alide_2187 IPR006145 Pseudouridine synthase, RsuA/RluA Alide_2188 IPR035965 PAS domain superfamily Alide_2188 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_2188 IPR013656 PAS fold-4 Alide_2188 IPR000014 PAS domain Alide_2188 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_2188 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_2188 IPR005467 Histidine kinase domain Alide_2188 IPR001789 Signal transduction response regulator, receiver domain Alide_2188 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_2188 IPR003594 Histidine kinase/HSP90-like ATPase Alide_2188 IPR011006 CheY-like superfamily Alide_2189 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal Alide_2189 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily Alide_2189 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Alide_2190 IPR016032 Signal transduction response regulator, C-terminal effector Alide_2190 IPR001789 Signal transduction response regulator, receiver domain Alide_2190 IPR011006 CheY-like superfamily Alide_2190 IPR000792 Transcription regulator LuxR, C-terminal Alide_2193 IPR013766 Thioredoxin domain Alide_2193 IPR036249 Thioredoxin-like superfamily Alide_2193 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE Alide_2193 IPR013740 Redoxin Alide_2193 IPR017937 Thioredoxin, conserved site Alide_2198 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Alide_2198 IPR007627 RNA polymerase sigma-70 region 2 Alide_2198 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Alide_2198 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2198 IPR014294 RNA polymerase sigma-W, bacillaceae Alide_2198 IPR014284 RNA polymerase sigma-70 like domain Alide_2198 IPR039425 RNA polymerase sigma-70 like Alide_2198 IPR013325 RNA polymerase sigma factor, region 2 Alide_2198 IPR013324 RNA polymerase sigma factor, region 3/4-like Alide_2200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_2200 IPR030391 RNA methyltransferase TrmA, conserved site Alide_2200 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Alide_2200 IPR010280 (Uracil-5)-methyltransferase family Alide_2200 IPR012340 Nucleic acid-binding, OB-fold Alide_2201 IPR011780 D-serine ammonia-lyase Alide_2201 IPR001926 Pyridoxal-phosphate dependent enzyme Alide_2201 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Alide_2202 IPR015796 Impact family, bacterial/archaeal Alide_2202 IPR036956 Impact, N-terminal domain superfamily Alide_2202 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site Alide_2202 IPR023582 Impact family Alide_2202 IPR035647 EF-G domain III/V-like Alide_2202 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_2202 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal Alide_2202 IPR001498 Impact, N-terminal Alide_2203 IPR014068 Azurin Alide_2203 IPR028871 Blue (type 1) copper protein, binding site Alide_2203 IPR008972 Cupredoxin Alide_2203 IPR000923 Blue (type 1) copper domain Alide_2204 IPR006638 Elp3/MiaB/NifB Alide_2204 IPR013704 Uncharacterised protein family UPF0313, N-terminal Alide_2204 IPR024560 Uncharacterised protein family UPF0313, C-terminal Alide_2204 IPR022946 Uncharacterised protein family UPF0313 Alide_2204 IPR023404 Radical SAM, alpha/beta horseshoe Alide_2204 IPR020612 Methylthiotransferase, conserved site Alide_2204 IPR007197 Radical SAM Alide_2205 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Alide_2205 IPR000796 Aspartate/other aminotransferase Alide_2205 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_2205 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_2205 IPR004839 Aminotransferase, class I/classII Alide_2205 IPR015424 Pyridoxal phosphate-dependent transferase Alide_2207 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2207 IPR010242 Transcription factor HTH, IscR Alide_2207 IPR036390 Winged helix DNA-binding domain superfamily Alide_2207 IPR000944 Transcription regulator Rrf2-type Alide_2208 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_2208 IPR016454 Cysteine desulfurase Alide_2208 IPR015424 Pyridoxal phosphate-dependent transferase Alide_2208 IPR010240 Cysteine desulfurase IscS Alide_2208 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Alide_2208 IPR000192 Aminotransferase class V domain Alide_2208 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_2209 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal Alide_2209 IPR011339 ISC system FeS cluster assembly, IscU scaffold Alide_2210 IPR000361 FeS cluster biogenesis Alide_2210 IPR035903 HesB-like domain superfamily Alide_2210 IPR011302 Iron-binding protein IscA, proteobacteria Alide_2210 IPR016092 FeS cluster insertion protein Alide_2210 IPR017870 FeS cluster insertion, C-terminal, conserved site Alide_2211 IPR036869 Chaperone J-domain superfamily Alide_2211 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain Alide_2211 IPR036386 HscB, C-terminal domain superfamily Alide_2211 IPR004640 Co-chaperone Hsc20 Alide_2211 IPR001623 DnaJ domain Alide_2212 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Alide_2212 IPR018181 Heat shock protein 70, conserved site Alide_2212 IPR042039 HscA chaperone, nucleotide-binding domain Alide_2212 IPR010236 ISC system FeS cluster assembly, HscA chaperone Alide_2212 IPR013126 Heat shock protein 70 family Alide_2212 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Alide_2213 IPR001055 Adrenodoxin Alide_2213 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Alide_2213 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria Alide_2213 IPR036010 2Fe-2S ferredoxin-like superfamily Alide_2213 IPR012675 Beta-grasp domain superfamily Alide_2213 IPR018298 Adrenodoxin, iron-sulphur binding site Alide_2214 IPR013520 Exonuclease, RNase T/DNA polymerase III Alide_2214 IPR012337 Ribonuclease H-like superfamily Alide_2214 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain Alide_2214 IPR036397 Ribonuclease H superfamily Alide_2214 IPR006309 DNA polymerase 3, epsilon subunit Alide_2215 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2215 IPR030862 L-2-hydroxyglutarate dehydrogenase Alide_2215 IPR006076 FAD dependent oxidoreductase Alide_2219 IPR013785 Aldolase-type TIM barrel Alide_2219 IPR001295 Dihydroorotate dehydrogenase, conserved site Alide_2219 IPR005720 Dihydroorotate dehydrogenase domain Alide_2219 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 Alide_2219 IPR005719 Dihydroorotate dehydrogenase, class 2 Alide_2220 IPR004788 Ribose 5-phosphate isomerase, type A Alide_2220 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup Alide_2220 IPR037171 NagB/RpiA transferase-like Alide_2222 IPR001567 Peptidase M3A/M3B catalytic domain Alide_2222 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Alide_2223 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase Alide_2223 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Alide_2223 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site Alide_2223 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Alide_2223 IPR036291 NAD(P)-binding domain superfamily Alide_2224 IPR000792 Transcription regulator LuxR, C-terminal Alide_2224 IPR011006 CheY-like superfamily Alide_2224 IPR001789 Signal transduction response regulator, receiver domain Alide_2224 IPR016032 Signal transduction response regulator, C-terminal effector Alide_2224 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2225 IPR000700 PAS-associated, C-terminal Alide_2225 IPR005467 Histidine kinase domain Alide_2225 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_2225 IPR013767 PAS fold Alide_2225 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_2225 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_2225 IPR003594 Histidine kinase/HSP90-like ATPase Alide_2225 IPR001610 PAC motif Alide_2225 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_2225 IPR000014 PAS domain Alide_2225 IPR035965 PAS domain superfamily Alide_2226 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Alide_2226 IPR029061 Thiamin diphosphate-binding fold Alide_2226 IPR041621 Pyruvate dehydrogenase E1 component, middle domain Alide_2226 IPR004660 Pyruvate dehydrogenase E1 component Alide_2226 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal Alide_2226 IPR005474 Transketolase, N-terminal Alide_2227 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Alide_2227 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain Alide_2227 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex Alide_2227 IPR000089 Biotin/lipoyl attachment Alide_2227 IPR011053 Single hybrid motif Alide_2227 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Alide_2227 IPR036625 E3-binding domain superfamily Alide_2227 IPR004167 Peripheral subunit-binding domain Alide_2228 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Alide_2228 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2228 IPR006258 Dihydrolipoamide dehydrogenase Alide_2228 IPR023753 FAD/NAD(P)-binding domain Alide_2228 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I Alide_2228 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Alide_2228 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Alide_2231 IPR042100 Bordetella uptake gene, domain 1 Alide_2231 IPR005064 Bordetella uptake gene Alide_2233 IPR000847 Transcription regulator HTH, LysR Alide_2233 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2233 IPR036390 Winged helix DNA-binding domain superfamily Alide_2233 IPR005119 LysR, substrate-binding Alide_2234 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Alide_2234 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Alide_2235 IPR042183 MmgE/PrpD superfamily, domain 1 Alide_2235 IPR042188 MmgE/PrpD superfamily, domain 2 Alide_2235 IPR005656 MmgE/PrpD Alide_2235 IPR036148 MmgE/PrpD superfamily Alide_2236 IPR005064 Bordetella uptake gene Alide_2236 IPR042100 Bordetella uptake gene, domain 1 Alide_2239 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Alide_2239 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Alide_2239 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Alide_2239 IPR011548 3-hydroxyisobutyrate dehydrogenase Alide_2239 IPR015815 3-hydroxyisobutyrate dehydrogenase-related Alide_2239 IPR036291 NAD(P)-binding domain superfamily Alide_2239 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_2239 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site Alide_2243 IPR000064 Endopeptidase, NLPC/P60 domain Alide_2243 IPR038765 Papain-like cysteine peptidase superfamily Alide_2244 IPR004840 Amino acid permease, conserved site Alide_2244 IPR004841 Amino acid permease/ SLC12A domain Alide_2246 IPR020846 Major facilitator superfamily domain Alide_2246 IPR023721 Multidrug resistance protein MdtD Alide_2246 IPR036259 MFS transporter superfamily Alide_2246 IPR011701 Major facilitator superfamily Alide_2246 IPR004638 Drug resistance transporter EmrB-like Alide_2247 IPR001633 EAL domain Alide_2247 IPR035919 EAL domain superfamily Alide_2247 IPR000160 GGDEF domain Alide_2247 IPR005330 MHYT domain Alide_2247 IPR029787 Nucleotide cyclase Alide_2248 IPR003844 Uncharacterised protein family UPF0060 Alide_2250 IPR036277 SMCs flexible hinge superfamily Alide_2250 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2250 IPR003395 RecF/RecN/SMC, N-terminal Alide_2250 IPR024704 Structural maintenance of chromosomes protein Alide_2250 IPR010935 SMCs flexible hinge Alide_2250 IPR011890 Structural maintenance of chromosomes protein, prokaryotic Alide_2252 IPR001357 BRCT domain Alide_2252 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type Alide_2252 IPR041663 DisA/LigA, helix-hairpin-helix motif Alide_2252 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Alide_2252 IPR013840 NAD-dependent DNA ligase, N-terminal Alide_2252 IPR013839 NAD-dependent DNA ligase, adenylation Alide_2252 IPR001679 NAD-dependent DNA ligase Alide_2252 IPR033136 NAD-dependent DNA ligase, conserved site Alide_2252 IPR010994 RuvA domain 2-like Alide_2252 IPR012340 Nucleic acid-binding, OB-fold Alide_2252 IPR004150 NAD-dependent DNA ligase, OB-fold Alide_2252 IPR018239 NAD-dependent DNA ligase, active site Alide_2252 IPR036420 BRCT domain superfamily Alide_2253 IPR002641 Patatin-like phospholipase domain Alide_2253 IPR001423 Lysophospholipase patatin, conserved site Alide_2253 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Alide_2254 IPR036950 Penicillin binding protein transglycosylase domain Alide_2254 IPR023346 Lysozyme-like domain superfamily Alide_2254 IPR001460 Penicillin-binding protein, transpeptidase Alide_2254 IPR001264 Glycosyl transferase, family 51 Alide_2254 IPR031376 Penicillin-binding protein, OB-like domain Alide_2254 IPR012338 Beta-lactamase/transpeptidase-like Alide_2255 IPR036259 MFS transporter superfamily Alide_2255 IPR020846 Major facilitator superfamily domain Alide_2255 IPR011701 Major facilitator superfamily Alide_2255 IPR004638 Drug resistance transporter EmrB-like Alide_2257 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily Alide_2257 IPR011234 Fumarylacetoacetase-like, C-terminal Alide_2258 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Alide_2258 IPR040079 Glutathione Transferase family Alide_2258 IPR036249 Thioredoxin-like superfamily Alide_2258 IPR034333 Glutathione S-transferases, class Zeta , N-terminal Alide_2258 IPR034330 Glutathione S-transferases, class Zeta , C-terminal Alide_2258 IPR004045 Glutathione S-transferase, N-terminal Alide_2258 IPR005955 Glutathione S-transferases, class Zeta Alide_2258 IPR010987 Glutathione S-transferase, C-terminal-like Alide_2261 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I Alide_2261 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain Alide_2261 IPR029058 Alpha/Beta hydrolase fold Alide_2262 IPR002155 Thiolase Alide_2262 IPR016039 Thiolase-like Alide_2262 IPR020617 Thiolase, C-terminal Alide_2262 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_2262 IPR020610 Thiolase, active site Alide_2262 IPR020613 Thiolase, conserved site Alide_2262 IPR020616 Thiolase, N-terminal Alide_2263 IPR036291 NAD(P)-binding domain superfamily Alide_2263 IPR011283 Acetoacetyl-CoA reductase Alide_2263 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_2263 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_2264 IPR032781 ABC-transporter extension domain Alide_2264 IPR003439 ABC transporter-like Alide_2264 IPR017871 ABC transporter, conserved site Alide_2264 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2264 IPR003593 AAA+ ATPase domain Alide_2265 IPR042100 Bordetella uptake gene, domain 1 Alide_2265 IPR005064 Bordetella uptake gene Alide_2266 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_2266 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_2266 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_2266 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_2266 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_2266 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_2266 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_2267 IPR020459 AMP-binding Alide_2267 IPR025110 AMP-binding enzyme, C-terminal domain Alide_2267 IPR020845 AMP-binding, conserved site Alide_2267 IPR042099 AMP-dependent synthetase-like superfamily Alide_2267 IPR000873 AMP-dependent synthetase/ligase Alide_2268 IPR005119 LysR, substrate-binding Alide_2268 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2268 IPR000847 Transcription regulator HTH, LysR Alide_2268 IPR036390 Winged helix DNA-binding domain superfamily Alide_2269 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Alide_2269 IPR007848 Methyltransferase small domain Alide_2269 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_2269 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase Alide_2269 IPR004556 Methyltransferase HemK-like Alide_2270 IPR011650 Peptidase M20, dimerisation domain Alide_2270 IPR002933 Peptidase M20 Alide_2270 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria Alide_2270 IPR036264 Bacterial exopeptidase dimerisation domain Alide_2270 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site Alide_2271 IPR003593 AAA+ ATPase domain Alide_2271 IPR001482 Type II/IV secretion system protein Alide_2271 IPR006321 Pilus retraction protein PilT Alide_2271 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2272 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family Alide_2272 IPR001451 Hexapeptide repeat Alide_2272 IPR018357 Hexapeptide transferase, conserved site Alide_2272 IPR011004 Trimeric LpxA-like superfamily Alide_2272 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 Alide_2272 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily Alide_2273 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_2273 IPR015424 Pyridoxal phosphate-dependent transferase Alide_2273 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 Alide_2273 IPR004839 Aminotransferase, class I/classII Alide_2273 IPR019881 Diaminopimelate aminotransferase, DapL, Desulfovibrio-type Alide_2273 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Alide_2273 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_2274 IPR007202 4Fe-4S domain Alide_2274 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Alide_2274 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_2274 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB Alide_2274 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria Alide_2277 IPR035587 DUS-like, FMN-binding domain Alide_2277 IPR004653 tRNA-dihydrouridine(20/20a) synthase Alide_2277 IPR013785 Aldolase-type TIM barrel Alide_2277 IPR001269 tRNA-dihydrouridine synthase Alide_2277 IPR018517 tRNA-dihydrouridine synthase, conserved site Alide_2279 IPR001647 DNA-binding HTH domain, TetR-type Alide_2279 IPR009057 Homeobox-like domain superfamily Alide_2281 IPR042099 AMP-dependent synthetase-like superfamily Alide_2281 IPR000873 AMP-dependent synthetase/ligase Alide_2281 IPR020845 AMP-binding, conserved site Alide_2282 IPR000485 AsnC-type HTH domain Alide_2282 IPR011711 GntR, C-terminal Alide_2282 IPR008920 Transcription regulator FadR/GntR, C-terminal Alide_2282 IPR000524 Transcription regulator HTH, GntR Alide_2282 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2282 IPR036390 Winged helix DNA-binding domain superfamily Alide_2283 IPR013785 Aldolase-type TIM barrel Alide_2283 IPR000891 Pyruvate carboxyltransferase Alide_2284 IPR042100 Bordetella uptake gene, domain 1 Alide_2284 IPR005064 Bordetella uptake gene Alide_2285 IPR003673 CoA-transferase family III Alide_2285 IPR023606 CoA-transferase family III domain superfamily Alide_2286 IPR001387 Cro/C1-type helix-turn-helix domain Alide_2286 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Alide_2286 IPR010359 IrrE N-terminal-like domain Alide_2286 IPR026281 HTH-type transcriptional regulator RamB Alide_2286 IPR018653 Domain of unknown function DUF2083,transcriptional regulator Alide_2288 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB Alide_2288 IPR003593 AAA+ ATPase domain Alide_2288 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2289 IPR034733 Acetyl-CoA carboxylase Alide_2289 IPR029045 ClpP/crotonase-like domain superfamily Alide_2289 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal Alide_2289 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal Alide_2290 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Alide_2290 IPR016185 Pre-ATP-grasp domain superfamily Alide_2290 IPR011054 Rudiment single hybrid motif Alide_2290 IPR005482 Biotin carboxylase, C-terminal Alide_2290 IPR011764 Biotin carboxylation domain Alide_2290 IPR011761 ATP-grasp fold Alide_2290 IPR005481 Biotin carboxylase-like, N-terminal domain Alide_2290 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase Alide_2292 IPR010722 Biotin and thiamin synthesis-associated domain Alide_2292 IPR024177 Biotin synthase Alide_2292 IPR006638 Elp3/MiaB/NifB Alide_2292 IPR007197 Radical SAM Alide_2292 IPR013785 Aldolase-type TIM barrel Alide_2292 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB Alide_2293 IPR042100 Bordetella uptake gene, domain 1 Alide_2293 IPR005064 Bordetella uptake gene Alide_2294 IPR039420 Transcriptional regulatory protein WalR-like Alide_2294 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_2294 IPR016032 Signal transduction response regulator, C-terminal effector Alide_2294 IPR001789 Signal transduction response regulator, receiver domain Alide_2294 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2294 IPR011006 CheY-like superfamily Alide_2295 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_2295 IPR005467 Histidine kinase domain Alide_2295 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_2295 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_2295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_2295 IPR013727 Two-component sensor kinase, N-terminal Alide_2295 IPR003594 Histidine kinase/HSP90-like ATPase Alide_2295 IPR003660 HAMP domain Alide_2298 IPR001763 Rhodanese-like domain Alide_2298 IPR023695 Thiosulfate sulfurtransferase, bacterial Alide_2298 IPR036873 Rhodanese-like domain superfamily Alide_2301 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2301 IPR023753 FAD/NAD(P)-binding domain Alide_2302 IPR003423 Outer membrane efflux protein Alide_2302 IPR010130 Type I secretion outer membrane protein, TolC Alide_2303 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Alide_2303 IPR001036 Acriflavin resistance protein Alide_2303 IPR022831 Multidrug resistance protein MdtB Alide_2305 IPR036390 Winged helix DNA-binding domain superfamily Alide_2305 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2305 IPR011991 ArsR-like helix-turn-helix domain Alide_2305 IPR001845 HTH ArsR-type DNA-binding domain Alide_2307 IPR017648 5-keto-4-deoxy-D-glucarate aldolase Alide_2307 IPR040442 Pyruvate kinase-like domain superfamily Alide_2307 IPR005000 HpcH/HpaI aldolase/citrate lyase domain Alide_2307 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_2309 IPR042100 Bordetella uptake gene, domain 1 Alide_2309 IPR005064 Bordetella uptake gene Alide_2310 IPR042100 Bordetella uptake gene, domain 1 Alide_2310 IPR005064 Bordetella uptake gene Alide_2311 IPR000843 LacI-type HTH domain Alide_2311 IPR006377 Catabolite control protein A Alide_2311 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Alide_2311 IPR028082 Periplasmic binding protein-like I Alide_2312 IPR036291 NAD(P)-binding domain superfamily Alide_2312 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_2312 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_2317 IPR040423 Phosphoethanolamine transferase Alide_2317 IPR000917 Sulfatase, N-terminal Alide_2317 IPR012549 Phosphoethanolamine transferase, N-terminal Alide_2317 IPR017850 Alkaline-phosphatase-like, core domain superfamily Alide_2319 IPR039420 Transcriptional regulatory protein WalR-like Alide_2319 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2319 IPR001789 Signal transduction response regulator, receiver domain Alide_2319 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_2319 IPR011006 CheY-like superfamily Alide_2319 IPR016032 Signal transduction response regulator, C-terminal effector Alide_2320 IPR013727 Two-component sensor kinase, N-terminal Alide_2320 IPR003594 Histidine kinase/HSP90-like ATPase Alide_2320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_2320 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_2320 IPR005467 Histidine kinase domain Alide_2320 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_2320 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_2321 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_2321 IPR001753 Enoyl-CoA hydratase/isomerase Alide_2321 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_2321 IPR029045 ClpP/crotonase-like domain superfamily Alide_2322 IPR005064 Bordetella uptake gene Alide_2322 IPR042100 Bordetella uptake gene, domain 1 Alide_2323 IPR013149 Alcohol dehydrogenase, C-terminal Alide_2323 IPR036291 NAD(P)-binding domain superfamily Alide_2323 IPR020843 Polyketide synthase, enoylreductase domain Alide_2323 IPR013154 Alcohol dehydrogenase, N-terminal Alide_2323 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Alide_2323 IPR011032 GroES-like superfamily Alide_2324 IPR023606 CoA-transferase family III domain superfamily Alide_2324 IPR003673 CoA-transferase family III Alide_2325 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_2325 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_2325 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_2325 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_2325 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_2325 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_2325 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_2327 IPR023606 CoA-transferase family III domain superfamily Alide_2327 IPR003673 CoA-transferase family III Alide_2329 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase Alide_2329 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2329 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_2331 IPR001851 ABC transporter, permease Alide_2332 IPR003439 ABC transporter-like Alide_2332 IPR003593 AAA+ ATPase domain Alide_2332 IPR017871 ABC transporter, conserved site Alide_2332 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ Alide_2332 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2333 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Alide_2333 IPR002078 RNA polymerase sigma factor 54 interaction domain Alide_2333 IPR003593 AAA+ ATPase domain Alide_2333 IPR003018 GAF domain Alide_2333 IPR029016 GAF-like domain superfamily Alide_2333 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2333 IPR002197 DNA binding HTH domain, Fis-type Alide_2333 IPR009057 Homeobox-like domain superfamily Alide_2333 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Alide_2333 IPR025944 Sigma-54 interaction domain, conserved site Alide_2334 IPR000073 Alpha/beta hydrolase fold-1 Alide_2334 IPR011053 Single hybrid motif Alide_2334 IPR000089 Biotin/lipoyl attachment Alide_2334 IPR029058 Alpha/Beta hydrolase fold Alide_2334 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Alide_2335 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2335 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Alide_2335 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Alide_2337 IPR024898 Octanoyltransferase LipM Alide_2337 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain Alide_2338 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain Alide_2338 IPR000089 Biotin/lipoyl attachment Alide_2338 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Alide_2338 IPR036625 E3-binding domain superfamily Alide_2338 IPR004167 Peripheral subunit-binding domain Alide_2338 IPR011053 Single hybrid motif Alide_2339 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Alide_2339 IPR027110 Pyruvate dehydrogenase E1 component subunit beta Alide_2339 IPR005475 Transketolase-like, pyrimidine-binding domain Alide_2339 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Alide_2339 IPR029061 Thiamin diphosphate-binding fold Alide_2339 IPR011053 Single hybrid motif Alide_2339 IPR000089 Biotin/lipoyl attachment Alide_2339 IPR033248 Transketolase, C-terminal domain Alide_2340 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Alide_2340 IPR029061 Thiamin diphosphate-binding fold Alide_2340 IPR005475 Transketolase-like, pyrimidine-binding domain Alide_2340 IPR033248 Transketolase, C-terminal domain Alide_2341 IPR001017 Dehydrogenase, E1 component Alide_2341 IPR029061 Thiamin diphosphate-binding fold Alide_2342 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2342 IPR011991 ArsR-like helix-turn-helix domain Alide_2342 IPR000485 AsnC-type HTH domain Alide_2342 IPR011008 Dimeric alpha-beta barrel Alide_2342 IPR019888 Transcription regulator AsnC-type Alide_2342 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Alide_2342 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Alide_2342 IPR036390 Winged helix DNA-binding domain superfamily Alide_2343 IPR038404 TRAP transporter solute receptor DctP superfamily Alide_2343 IPR018389 TRAP transporter solute receptor DctP/TeaA Alide_2343 IPR004682 TRAP transporter solute receptor, DctP family Alide_2345 IPR004681 TRAP transporter large membrane protein DctM Alide_2345 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Alide_2346 IPR001279 Metallo-beta-lactamase Alide_2346 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Alide_2346 IPR013471 Ribonuclease Z/BN Alide_2347 IPR006223 Glycine cleavage system T protein Alide_2347 IPR022903 Glycine cleavage system T protein, bacteria Alide_2347 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain Alide_2347 IPR006222 Aminomethyltransferase, folate-binding domain Alide_2347 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Alide_2347 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Alide_2347 IPR028896 Aminomethyltransferase-like Alide_2348 IPR002930 Glycine cleavage system H-protein Alide_2348 IPR011053 Single hybrid motif Alide_2348 IPR017453 Glycine cleavage system H-protein, subgroup Alide_2348 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Alide_2348 IPR033753 Glycine cleavage system H-protein/Simiate Alide_2348 IPR000089 Biotin/lipoyl attachment Alide_2349 IPR003437 Glycine dehydrogenase (decarboxylating) Alide_2349 IPR020581 Glycine cleavage system P protein Alide_2349 IPR015424 Pyridoxal phosphate-dependent transferase Alide_2349 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_2349 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_2350 IPR038390 Metal-sensitive transcriptional repressor superfamily Alide_2350 IPR003735 Metal-sensitive transcriptional repressor Alide_2351 IPR013149 Alcohol dehydrogenase, C-terminal Alide_2351 IPR020843 Polyketide synthase, enoylreductase domain Alide_2351 IPR036291 NAD(P)-binding domain superfamily Alide_2351 IPR014183 Alcohol dehydrogenase class III Alide_2351 IPR011032 GroES-like superfamily Alide_2351 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Alide_2351 IPR013154 Alcohol dehydrogenase, N-terminal Alide_2352 IPR029058 Alpha/Beta hydrolase fold Alide_2352 IPR014186 S-formylglutathione hydrolase Alide_2352 IPR000801 Putative esterase Alide_2355 IPR040086 Protein MJ0683-like Alide_2355 IPR007197 Radical SAM Alide_2355 IPR013785 Aldolase-type TIM barrel Alide_2355 IPR006638 Elp3/MiaB/NifB Alide_2356 IPR023459 Transcription elongation factor GreA/GreB family Alide_2356 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily Alide_2356 IPR028625 Regulator of nucleoside diphosphate kinase Alide_2356 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain Alide_2356 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal Alide_2359 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_2359 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_2359 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Alide_2359 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_2359 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_2359 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_2359 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_2360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_2360 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Alide_2360 IPR001308 Electron transfer flavoprotein alpha subunit/FixB Alide_2360 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal Alide_2360 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Alide_2360 IPR029035 DHS-like NAD/FAD-binding domain superfamily Alide_2360 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Alide_2361 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site Alide_2361 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Alide_2361 IPR012255 Electron transfer flavoprotein, beta subunit Alide_2361 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal Alide_2361 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_2362 IPR029045 ClpP/crotonase-like domain superfamily Alide_2362 IPR001753 Enoyl-CoA hydratase/isomerase Alide_2363 IPR023801 Histone deacetylase domain Alide_2363 IPR037138 Histone deacetylase domain superfamily Alide_2363 IPR000286 Histone deacetylase family Alide_2363 IPR023696 Ureohydrolase domain superfamily Alide_2364 IPR041628 ChlI/MoxR, AAA lid domain Alide_2364 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2364 IPR011703 ATPase, AAA-3 Alide_2366 IPR025403 Domain of unknown function DUF4129 Alide_2366 IPR038765 Papain-like cysteine peptidase superfamily Alide_2366 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal Alide_2366 IPR002931 Transglutaminase-like Alide_2367 IPR023346 Lysozyme-like domain superfamily Alide_2367 IPR031304 Transglycosylase SLT domain 2 Alide_2367 IPR011757 Lytic transglycosylase MltB Alide_2368 IPR029061 Thiamin diphosphate-binding fold Alide_2368 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Alide_2368 IPR033248 Transketolase, C-terminal domain Alide_2368 IPR005475 Transketolase-like, pyrimidine-binding domain Alide_2369 IPR005474 Transketolase, N-terminal Alide_2369 IPR029061 Thiamin diphosphate-binding fold Alide_2370 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Alide_2370 IPR004681 TRAP transporter large membrane protein DctM Alide_2372 IPR018389 TRAP transporter solute receptor DctP/TeaA Alide_2372 IPR007387 TRAP transporter, small membrane protein DctQ Alide_2372 IPR038404 TRAP transporter solute receptor DctP superfamily Alide_2372 IPR004682 TRAP transporter solute receptor, DctP family Alide_2372 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_2373 IPR036291 NAD(P)-binding domain superfamily Alide_2373 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_2373 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_2374 IPR036390 Winged helix DNA-binding domain superfamily Alide_2374 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2374 IPR000847 Transcription regulator HTH, LysR Alide_2374 IPR005119 LysR, substrate-binding Alide_2375 IPR033248 Transketolase, C-terminal domain Alide_2375 IPR020826 Transketolase binding site Alide_2375 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Alide_2375 IPR005474 Transketolase, N-terminal Alide_2375 IPR005475 Transketolase-like, pyrimidine-binding domain Alide_2375 IPR033247 Transketolase family Alide_2375 IPR005478 Transketolase, bacterial-like Alide_2375 IPR029061 Thiamin diphosphate-binding fold Alide_2376 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Alide_2376 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Alide_2376 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Alide_2376 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Alide_2376 IPR036291 NAD(P)-binding domain superfamily Alide_2377 IPR000847 Transcription regulator HTH, LysR Alide_2377 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2377 IPR036390 Winged helix DNA-binding domain superfamily Alide_2377 IPR005119 LysR, substrate-binding Alide_2378 IPR004630 Uncharacterised protein family UPF0324, bacteria Alide_2378 IPR018383 Uncharacterised protein family UPF0324, prokaryote Alide_2379 IPR000709 Leu/Ile/Val-binding protein Alide_2379 IPR028082 Periplasmic binding protein-like I Alide_2379 IPR028081 Leucine-binding protein domain Alide_2381 IPR017911 ABC transporter, macrolide export, ATP-binding domain Alide_2381 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2381 IPR025857 MacB-like periplasmic core domain Alide_2381 IPR003439 ABC transporter-like Alide_2381 IPR003838 ABC transporter permease protein domain Alide_2381 IPR003593 AAA+ ATPase domain Alide_2381 IPR017871 ABC transporter, conserved site Alide_2382 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2382 IPR017871 ABC transporter, conserved site Alide_2382 IPR003439 ABC transporter-like Alide_2382 IPR017911 ABC transporter, macrolide export, ATP-binding domain Alide_2382 IPR003593 AAA+ ATPase domain Alide_2382 IPR003838 ABC transporter permease protein domain Alide_2382 IPR025857 MacB-like periplasmic core domain Alide_2383 IPR006143 RND efflux pump, membrane fusion protein Alide_2383 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Alide_2384 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Alide_2384 IPR003423 Outer membrane efflux protein Alide_2385 IPR017860 Peptidase M22, conserved site Alide_2385 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD Alide_2385 IPR017861 Kae1/TsaD family Alide_2385 IPR000905 Gcp-like domain Alide_2386 IPR015875 IMP dehydrogenase / GMP reductase, conserved site Alide_2386 IPR013785 Aldolase-type TIM barrel Alide_2386 IPR001093 IMP dehydrogenase/GMP reductase Alide_2386 IPR000644 CBS domain Alide_2386 IPR005990 Inosine-5'-monophosphate dehydrogenase Alide_2388 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Alide_2388 IPR006143 RND efflux pump, membrane fusion protein Alide_2389 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Alide_2389 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Alide_2389 IPR001036 Acriflavin resistance protein Alide_2390 IPR003423 Outer membrane efflux protein Alide_2390 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Alide_2391 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2391 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily Alide_2391 IPR007419 BFD-like [2Fe-2S]-binding domain Alide_2391 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site Alide_2391 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Alide_2391 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Alide_2391 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal Alide_2391 IPR023753 FAD/NAD(P)-binding domain Alide_2391 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily Alide_2391 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain Alide_2391 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB Alide_2391 IPR017121 Nitrite reductase [NAD(P)H], large subunit Alide_2392 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily Alide_2392 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Alide_2392 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site Alide_2393 IPR007419 BFD-like [2Fe-2S]-binding domain Alide_2393 IPR009010 Aspartate decarboxylase-like domain superfamily Alide_2393 IPR006656 Molybdopterin oxidoreductase Alide_2393 IPR006657 Molybdopterin dinucleotide-binding domain Alide_2393 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Alide_2393 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain Alide_2393 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site Alide_2393 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily Alide_2394 IPR004737 Nitrate transporter Alide_2394 IPR036259 MFS transporter superfamily Alide_2394 IPR020846 Major facilitator superfamily domain Alide_2394 IPR011701 Major facilitator superfamily Alide_2396 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Alide_2396 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Alide_2396 IPR005940 Anthranilate phosphoribosyl transferase Alide_2396 IPR000312 Glycosyl transferase, family 3 Alide_2396 IPR017459 Glycosyl transferase family 3, N-terminal domain Alide_2397 IPR014777 Tetrapyrrole methylase, subdomain 1 Alide_2397 IPR000878 Tetrapyrrole methylase Alide_2397 IPR014776 Tetrapyrrole methylase, subdomain 2 Alide_2397 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Alide_2397 IPR035996 Tetrapyrrole methylase superfamily Alide_2397 IPR006366 Uroporphyrin-III C-methyltransferase Alide_2398 IPR006683 Thioesterase domain Alide_2398 IPR029069 HotDog domain superfamily Alide_2398 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain Alide_2398 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase Alide_2399 IPR023166 HI0933-like insert domain superfamily Alide_2399 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2399 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like Alide_2402 IPR005064 Bordetella uptake gene Alide_2402 IPR042100 Bordetella uptake gene, domain 1 Alide_2403 IPR025110 AMP-binding enzyme, C-terminal domain Alide_2403 IPR000873 AMP-dependent synthetase/ligase Alide_2403 IPR020845 AMP-binding, conserved site Alide_2403 IPR042099 AMP-dependent synthetase-like superfamily Alide_2404 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_2404 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_2404 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_2404 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_2404 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_2404 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_2405 IPR042100 Bordetella uptake gene, domain 1 Alide_2405 IPR005064 Bordetella uptake gene Alide_2406 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I Alide_2406 IPR006258 Dihydrolipoamide dehydrogenase Alide_2406 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2406 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Alide_2406 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Alide_2406 IPR023753 FAD/NAD(P)-binding domain Alide_2406 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Alide_2407 IPR004167 Peripheral subunit-binding domain Alide_2407 IPR011053 Single hybrid motif Alide_2407 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex Alide_2407 IPR036625 E3-binding domain superfamily Alide_2407 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Alide_2407 IPR000089 Biotin/lipoyl attachment Alide_2407 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain Alide_2407 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Alide_2408 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_2408 IPR029045 ClpP/crotonase-like domain superfamily Alide_2408 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_2408 IPR001753 Enoyl-CoA hydratase/isomerase Alide_2409 IPR029061 Thiamin diphosphate-binding fold Alide_2409 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Alide_2409 IPR005475 Transketolase-like, pyrimidine-binding domain Alide_2409 IPR033248 Transketolase, C-terminal domain Alide_2410 IPR029061 Thiamin diphosphate-binding fold Alide_2410 IPR001017 Dehydrogenase, E1 component Alide_2411 IPR003965 Fatty acid synthase Alide_2411 IPR002539 MaoC-like dehydratase domain Alide_2411 IPR029069 HotDog domain superfamily Alide_2415 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_2415 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_2415 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_2415 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_2415 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_2415 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_2415 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_2418 IPR002744 MIP18 family-like Alide_2418 IPR034904 Fe-S cluster assembly domain superfamily Alide_2419 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal Alide_2420 IPR016454 Cysteine desulfurase Alide_2420 IPR015424 Pyridoxal phosphate-dependent transferase Alide_2420 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_2420 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_2420 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Alide_2420 IPR000192 Aminotransferase class V domain Alide_2420 IPR010970 Cysteine desulfurase, SufS Alide_2422 IPR003439 ABC transporter-like Alide_2422 IPR017871 ABC transporter, conserved site Alide_2422 IPR010230 FeS cluster assembly SUF system, ATPase SufC Alide_2422 IPR003593 AAA+ ATPase domain Alide_2422 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2423 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Alide_2423 IPR000825 SUF system FeS cluster assembly, SufBD Alide_2423 IPR010231 SUF system FeS cluster assembly, SufB Alide_2424 IPR018278 Ribosomal protein S21, conserved site Alide_2424 IPR001911 Ribosomal protein S21 Alide_2424 IPR038380 Ribosomal protein S21 superfamily Alide_2426 IPR037522 HD-GYP domain Alide_2426 IPR003607 HD/PDEase domain Alide_2427 IPR004165 Coenzyme A transferase family I Alide_2427 IPR037171 NagB/RpiA transferase-like Alide_2427 IPR012791 3-oxoacid CoA-transferase, subunit B Alide_2427 IPR004164 Coenzyme A transferase active site Alide_2428 IPR037171 NagB/RpiA transferase-like Alide_2428 IPR004165 Coenzyme A transferase family I Alide_2428 IPR004163 Coenzyme A transferase binding site Alide_2428 IPR012792 3-oxoacid CoA-transferase, subunit A Alide_2430 IPR002656 Acyltransferase 3 Alide_2430 IPR036514 SGNH hydrolase superfamily Alide_2431 IPR010167 Amino-acid N-acetyltransferase Alide_2431 IPR016181 Acyl-CoA N-acyltransferase Alide_2431 IPR033719 N-acetylglutamate synthase, kinase-like domain Alide_2431 IPR001048 Aspartate/glutamate/uridylate kinase Alide_2431 IPR000182 GNAT domain Alide_2431 IPR036393 Acetylglutamate kinase-like superfamily Alide_2433 IPR023080 D-amino acid dehydrogenase DadA Alide_2433 IPR006076 FAD dependent oxidoreductase Alide_2433 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2433 IPR006036 Potassium uptake protein TrkA Alide_2436 IPR001851 ABC transporter, permease Alide_2438 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2438 IPR003593 AAA+ ATPase domain Alide_2438 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Alide_2438 IPR003439 ABC transporter-like Alide_2438 IPR017871 ABC transporter, conserved site Alide_2439 IPR003593 AAA+ ATPase domain Alide_2439 IPR017871 ABC transporter, conserved site Alide_2439 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2439 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_2439 IPR003439 ABC transporter-like Alide_2440 IPR028081 Leucine-binding protein domain Alide_2440 IPR000709 Leu/Ile/Val-binding protein Alide_2440 IPR028082 Periplasmic binding protein-like I Alide_2441 IPR020625 Schiff base-forming aldolase, active site Alide_2441 IPR002220 DapA-like Alide_2441 IPR020624 Schiff base-forming aldolase, conserved site Alide_2441 IPR013785 Aldolase-type TIM barrel Alide_2441 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA Alide_2443 IPR036390 Winged helix DNA-binding domain superfamily Alide_2443 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2443 IPR011711 GntR, C-terminal Alide_2443 IPR008920 Transcription regulator FadR/GntR, C-terminal Alide_2443 IPR000524 Transcription regulator HTH, GntR Alide_2444 IPR006675 HDIG domain Alide_2444 IPR006674 HD domain Alide_2444 IPR003607 HD/PDEase domain Alide_2444 IPR037522 HD-GYP domain Alide_2445 IPR003752 Disulphide bond formation protein DsbB/BdbC Alide_2445 IPR023380 DsbB-like superfamily Alide_2445 IPR022920 Disulphide bond formation protein DsbB Alide_2446 IPR003593 AAA+ ATPase domain Alide_2446 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal Alide_2446 IPR005666 Sulphate transport system permease protein 1 Alide_2446 IPR041193 CysA, C-terminal regulatory domain Alide_2446 IPR024765 TOBE-like domain Alide_2446 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2446 IPR008995 Molybdate/tungstate binding, C-terminal Alide_2446 IPR017871 ABC transporter, conserved site Alide_2446 IPR003439 ABC transporter-like Alide_2447 IPR035906 MetI-like superfamily Alide_2447 IPR005667 Sulphate ABC transporter permease protein 2 Alide_2447 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_2447 IPR011866 Sulphate ABC transporter, permease protein CysW Alide_2448 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_2448 IPR011865 Sulphate ABC transporter, permease protein CysT Alide_2448 IPR005667 Sulphate ABC transporter permease protein 2 Alide_2448 IPR035906 MetI-like superfamily Alide_2449 IPR005669 Thiosulphate/Sulfate-binding protein Alide_2449 IPR034408 Sulphate/thiosulphate-binding site Alide_2449 IPR000957 Sulphate/thiosulphate-binding, conserved site Alide_2451 IPR005119 LysR, substrate-binding Alide_2451 IPR036390 Winged helix DNA-binding domain superfamily Alide_2451 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2451 IPR000847 Transcription regulator HTH, LysR Alide_2452 IPR003680 Flavodoxin-like fold Alide_2452 IPR029039 Flavoprotein-like superfamily Alide_2452 IPR023048 NADH-azoreductase, FMN-dependent Alide_2453 IPR029039 Flavoprotein-like superfamily Alide_2453 IPR005025 NADPH-dependent FMN reductase-like Alide_2454 IPR004872 Lipoprotein NlpA family Alide_2455 IPR035906 MetI-like superfamily Alide_2455 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_2456 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2456 IPR018449 NIL domain Alide_2456 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain Alide_2456 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal Alide_2456 IPR017871 ABC transporter, conserved site Alide_2456 IPR026253 Methionine import ATP-binding protein MetN Alide_2456 IPR003593 AAA+ ATPase domain Alide_2456 IPR003439 ABC transporter-like Alide_2458 IPR034137 RecR, TOPRIM domain Alide_2458 IPR006171 TOPRIM domain Alide_2458 IPR023627 Recombination protein RecR Alide_2458 IPR023628 Recombination protein RecR, C4-type zinc finger Alide_2458 IPR000093 DNA recombination protein RecR Alide_2459 IPR004401 Nucleoid-associated protein YbaB/EbfC family Alide_2459 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Alide_2460 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily Alide_2460 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Alide_2460 IPR003593 AAA+ ATPase domain Alide_2460 IPR001270 ClpA/B family Alide_2460 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV Alide_2460 IPR022754 DNA polymerase III, gamma subunit, domain III Alide_2460 IPR012763 DNA polymerase III, subunit gamma/ tau Alide_2460 IPR021029 DNA polymerase III, tau subunit, domain V Alide_2460 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2461 IPR004606 Molybdenum-pterin binding Alide_2461 IPR005116 Transport-associated OB, type 1 Alide_2461 IPR003725 Molybdenum-binding protein ModE, N-terminal Alide_2461 IPR016462 Molybdate-dependent transcriptional regulator ModE Alide_2461 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2461 IPR036390 Winged helix DNA-binding domain superfamily Alide_2461 IPR008995 Molybdate/tungstate binding, C-terminal Alide_2461 IPR000847 Transcription regulator HTH, LysR Alide_2462 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal Alide_2462 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal Alide_2462 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal Alide_2462 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Alide_2462 IPR006242 Putative pyrophosphorylase ModD Alide_2462 IPR013785 Aldolase-type TIM barrel Alide_2462 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily Alide_2463 IPR035906 MetI-like superfamily Alide_2463 IPR011867 Molybdate ABC transporter, permease protein Alide_2463 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_2464 IPR005950 Molybdate ABC transporter, substrate-binding protein Alide_2468 IPR003593 AAA+ ATPase domain Alide_2468 IPR003439 ABC transporter-like Alide_2468 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2468 IPR017871 ABC transporter, conserved site Alide_2469 IPR037294 ABC transporter, BtuC-like Alide_2469 IPR000522 ABC transporter, permease protein, BtuC-like Alide_2472 IPR039426 Vitamin B12 transporter BtuB-like Alide_2472 IPR012910 TonB-dependent receptor, plug domain Alide_2472 IPR037066 TonB-dependent receptor, plug domain superfamily Alide_2472 IPR000531 TonB-dependent receptor-like, beta-barrel Alide_2472 IPR010101 TonB-dependent vitamin B12 transporter BtuB Alide_2472 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Alide_2472 IPR010917 TonB-dependent receptor, conserved site Alide_2475 IPR012093 Pirin Alide_2475 IPR011051 RmlC-like cupin domain superfamily Alide_2475 IPR014710 RmlC-like jelly roll fold Alide_2475 IPR008778 Pirin, C-terminal domain Alide_2475 IPR003829 Pirin, N-terminal domain Alide_2476 IPR008778 Pirin, C-terminal domain Alide_2476 IPR012093 Pirin Alide_2476 IPR014710 RmlC-like jelly roll fold Alide_2476 IPR003829 Pirin, N-terminal domain Alide_2476 IPR011051 RmlC-like cupin domain superfamily Alide_2477 IPR014017 UvrD-like DNA helicase, C-terminal Alide_2477 IPR011335 Restriction endonuclease type II-like Alide_2477 IPR000212 DNA helicase, UvrD/REP type Alide_2477 IPR014152 DNA helicase subunit AddA Alide_2477 IPR011604 Exonuclease, phage-type/RecB, C-terminal Alide_2477 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2477 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Alide_2477 IPR014016 UvrD-like helicase, ATP-binding domain Alide_2477 IPR034739 UvrD/AddA helicase, N-terminal Alide_2478 IPR000212 DNA helicase, UvrD/REP type Alide_2478 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2478 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Alide_2478 IPR014016 UvrD-like helicase, ATP-binding domain Alide_2478 IPR014140 DNA helicase subunit AddB Alide_2478 IPR014017 UvrD-like DNA helicase, C-terminal Alide_2479 IPR017937 Thioredoxin, conserved site Alide_2479 IPR036249 Thioredoxin-like superfamily Alide_2479 IPR005746 Thioredoxin Alide_2479 IPR013766 Thioredoxin domain Alide_2480 IPR012340 Nucleic acid-binding, OB-fold Alide_2480 IPR041703 Transcription termination factor Rho, ATP binding domain Alide_2480 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2480 IPR011129 Cold shock domain Alide_2480 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Alide_2480 IPR011112 Rho termination factor, N-terminal Alide_2480 IPR036269 Rho termination factor, N-terminal domain superfamily Alide_2480 IPR003593 AAA+ ATPase domain Alide_2480 IPR004665 Transcription termination factor Rho Alide_2480 IPR011113 Rho termination factor, RNA-binding domain Alide_2481 IPR042105 Ribosomal protein L31 superfamily Alide_2481 IPR027493 Ribosomal protein L31 type B Alide_2481 IPR034704 L28p-like Alide_2481 IPR002150 Ribosomal protein L31 Alide_2483 IPR002528 Multi antimicrobial extrusion protein Alide_2484 IPR021766 Phosphate regulon sensor protein PhoR Alide_2484 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR Alide_2484 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_2484 IPR013767 PAS fold Alide_2484 IPR005467 Histidine kinase domain Alide_2484 IPR003594 Histidine kinase/HSP90-like ATPase Alide_2484 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_2484 IPR035965 PAS domain superfamily Alide_2484 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_2484 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_2484 IPR000014 PAS domain Alide_2485 IPR039420 Transcriptional regulatory protein WalR-like Alide_2485 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_2485 IPR001789 Signal transduction response regulator, receiver domain Alide_2485 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB Alide_2485 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2485 IPR011006 CheY-like superfamily Alide_2486 IPR038078 PhoU-like domain superfamily Alide_2486 IPR028366 Phosphate transport system protein PhoU Alide_2486 IPR026022 PhoU domain Alide_2487 IPR005670 Phosphate transport system permease protein 1 Alide_2487 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2487 IPR015850 ABC transporter, phosphate import, PstB Alide_2487 IPR017871 ABC transporter, conserved site Alide_2487 IPR003439 ABC transporter-like Alide_2487 IPR003593 AAA+ ATPase domain Alide_2488 IPR005672 Phosphate transport system permease protein PstA Alide_2488 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_2488 IPR035906 MetI-like superfamily Alide_2489 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_2489 IPR035906 MetI-like superfamily Alide_2489 IPR011864 Phosphate ABC transporter, permease protein PstC Alide_2490 IPR024370 PBP domain Alide_2490 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS Alide_2491 IPR030673 Pyrophosphatase, GppA/Ppx-type Alide_2491 IPR022371 Exopolyphosphatase Alide_2491 IPR003695 Ppx/GppA phosphatase Alide_2492 IPR029033 Histidine phosphatase superfamily Alide_2492 IPR013078 Histidine phosphatase superfamily, clade-1 Alide_2493 IPR036830 Polyphosphate kinase middle domain superfamily Alide_2493 IPR025200 Polyphosphate kinase C-terminal domain 2 Alide_2493 IPR003414 Polyphosphate kinase Alide_2493 IPR041108 Polyphosphate kinase, C-terminal domain 1 Alide_2493 IPR025198 Polyphosphate kinase N-terminal domain Alide_2493 IPR036832 Polyphosphate kinase N-terminal domain superfamily Alide_2493 IPR024953 Polyphosphate kinase middle domain Alide_2495 IPR001633 EAL domain Alide_2495 IPR035919 EAL domain superfamily Alide_2495 IPR000160 GGDEF domain Alide_2495 IPR005330 MHYT domain Alide_2495 IPR029787 Nucleotide cyclase Alide_2496 IPR005843 Alpha-D-phosphohexomutase, C-terminal Alide_2496 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily Alide_2496 IPR006352 Phosphoglucosamine mutase, bacterial type Alide_2496 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Alide_2496 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Alide_2496 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Alide_2496 IPR016066 Alpha-D-phosphohexomutase, conserved site Alide_2496 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Alide_2496 IPR005841 Alpha-D-phosphohexomutase superfamily Alide_2497 IPR000489 Pterin-binding domain Alide_2497 IPR006390 Dihydropteroate synthase Alide_2497 IPR011005 Dihydropteroate synthase-like Alide_2498 IPR011546 Peptidase M41, FtsH extracellular Alide_2498 IPR000642 Peptidase M41 Alide_2498 IPR037219 Peptidase M41-like Alide_2498 IPR003593 AAA+ ATPase domain Alide_2498 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2498 IPR005936 Peptidase, FtsH Alide_2498 IPR003960 ATPase, AAA-type, conserved site Alide_2498 IPR003959 ATPase, AAA-type, core Alide_2498 IPR041569 AAA ATPase, AAA+ lid domain Alide_2499 IPR015507 Ribosomal RNA large subunit methyltransferase E Alide_2499 IPR002877 Ribosomal RNA methyltransferase FtsJ domain Alide_2499 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_2500 IPR001890 RNA-binding, CRM domain Alide_2500 IPR035920 YhbY-like superfamily Alide_2500 IPR017924 RNA-binding protein YhbY Alide_2503 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily Alide_2503 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal Alide_2503 IPR023459 Transcription elongation factor GreA/GreB family Alide_2503 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal Alide_2503 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily Alide_2503 IPR028624 Transcription elongation factor GreA/GreB Alide_2503 IPR006359 Transcription elongation factor GreA Alide_2503 IPR018151 Transcription elongation factor, GreA/GreB, conserved site Alide_2504 IPR036914 Methylglyoxal synthase-like domain superfamily Alide_2504 IPR016185 Pre-ATP-grasp domain superfamily Alide_2504 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain Alide_2504 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain Alide_2504 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily Alide_2504 IPR011761 ATP-grasp fold Alide_2504 IPR011607 Methylglyoxal synthase-like domain Alide_2504 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain Alide_2504 IPR006275 Carbamoyl-phosphate synthase, large subunit Alide_2504 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Alide_2505 IPR017926 Glutamine amidotransferase Alide_2505 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain Alide_2505 IPR029062 Class I glutamine amidotransferase-like Alide_2505 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily Alide_2505 IPR006274 Carbamoyl-phosphate synthase, small subunit Alide_2505 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain Alide_2506 IPR000551 MerR-type HTH domain Alide_2506 IPR009061 Putative DNA-binding domain superfamily Alide_2507 IPR005684 Integration host factor, alpha subunit Alide_2507 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily Alide_2507 IPR020816 Histone-like DNA-binding protein, conserved site Alide_2507 IPR000119 Histone-like DNA-binding protein Alide_2508 IPR009061 Putative DNA-binding domain superfamily Alide_2508 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Alide_2508 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain Alide_2508 IPR002547 tRNA-binding domain Alide_2508 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain Alide_2508 IPR005147 tRNA synthetase, B5-domain Alide_2508 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily Alide_2508 IPR005121 Ferrodoxin-fold anticodon-binding domain Alide_2508 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit Alide_2508 IPR005146 B3/B4 tRNA-binding domain Alide_2508 IPR012340 Nucleic acid-binding, OB-fold Alide_2509 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit Alide_2509 IPR006195 Aminoacyl-tRNA synthetase, class II Alide_2509 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm Alide_2509 IPR002319 Phenylalanyl-tRNA synthetase Alide_2509 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal Alide_2509 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial Alide_2510 IPR035566 Ribosomal protein L20, C-terminal Alide_2510 IPR005813 Ribosomal protein L20 Alide_2511 IPR021137 Ribosomal protein L35 Alide_2511 IPR018265 Ribosomal protein L35, conserved site Alide_2511 IPR001706 Ribosomal protein L35, non-mitochondrial Alide_2511 IPR037229 Ribosomal protein L35 superfamily Alide_2512 IPR001288 Translation initiation factor 3 Alide_2512 IPR019813 Translation initiation factor 3, conserved site Alide_2512 IPR019815 Translation initiation factor 3, C-terminal Alide_2512 IPR019814 Translation initiation factor 3, N-terminal Alide_2512 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily Alide_2512 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily Alide_2513 IPR036621 Anticodon-binding domain superfamily Alide_2513 IPR002320 Threonine-tRNA ligase, class IIa Alide_2513 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily Alide_2513 IPR033728 Threonine-tRNA ligase catalytic core domain Alide_2513 IPR012947 Threonyl/alanyl tRNA synthetase, SAD Alide_2513 IPR004154 Anticodon-binding Alide_2513 IPR012675 Beta-grasp domain superfamily Alide_2513 IPR004095 TGS Alide_2513 IPR012676 TGS-like Alide_2513 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Alide_2513 IPR006195 Aminoacyl-tRNA synthetase, class II Alide_2516 IPR039556 ICL/PEPM domain Alide_2516 IPR040442 Pyruvate kinase-like domain superfamily Alide_2516 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_2516 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site Alide_2516 IPR006254 Isocitrate lyase Alide_2521 IPR002898 MotA/TolQ/ExbB proton channel Alide_2522 IPR003400 Biopolymer transport protein ExbD/TolR Alide_2524 IPR038084 GlcG-like domain superfamily Alide_2524 IPR005624 Haem-degrading Alide_2525 IPR006213 Bax inhibitor 1, conserved site Alide_2525 IPR006214 Bax inhibitor 1-related Alide_2527 IPR020846 Major facilitator superfamily domain Alide_2527 IPR036259 MFS transporter superfamily Alide_2527 IPR023721 Multidrug resistance protein MdtD Alide_2527 IPR011701 Major facilitator superfamily Alide_2529 IPR000390 Small multidrug resistance protein family Alide_2530 IPR014047 Chromate transporter, long chain Alide_2530 IPR003370 Chromate transporter Alide_2532 IPR027546 Sirtuin, class III Alide_2532 IPR029035 DHS-like NAD/FAD-binding domain superfamily Alide_2532 IPR003000 Sirtuin family Alide_2532 IPR026591 Sirtuin, catalytic core small domain superfamily Alide_2532 IPR026590 Sirtuin family, catalytic core domain Alide_2534 IPR011008 Dimeric alpha-beta barrel Alide_2534 IPR009874 Protein of unknown function DUF1428 Alide_2541 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB Alide_2541 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Alide_2541 IPR013123 RNA 2-O ribose methyltransferase, substrate binding Alide_2541 IPR004441 RNA methyltransferase TrmH family Alide_2541 IPR029064 50S ribosomal protein L30e-like Alide_2541 IPR001537 tRNA/rRNA methyltransferase, SpoU type Alide_2541 IPR029028 Alpha/beta knot methyltransferases Alide_2542 IPR001991 Sodium:dicarboxylate symporter Alide_2542 IPR023025 Serine/threonine transporter SstT Alide_2542 IPR036458 Sodium:dicarboxylate symporter superfamily Alide_2543 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2543 IPR017871 ABC transporter, conserved site Alide_2543 IPR003439 ABC transporter-like Alide_2543 IPR003593 AAA+ ATPase domain Alide_2544 IPR013830 SGNH hydrolase-type esterase domain Alide_2544 IPR036514 SGNH hydrolase superfamily Alide_2546 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Alide_2546 IPR015424 Pyridoxal phosphate-dependent transferase Alide_2546 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_2546 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_2546 IPR006233 Cystathionine beta-lyase, bacterial Alide_2548 IPR002645 STAS domain Alide_2548 IPR001902 SLC26A/SulP transporter Alide_2548 IPR036513 STAS domain superfamily Alide_2548 IPR011547 SLC26A/SulP transporter domain Alide_2549 IPR029787 Nucleotide cyclase Alide_2549 IPR007894 MASE2 Alide_2549 IPR000160 GGDEF domain Alide_2550 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Alide_2550 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2550 IPR025501 ATP binding protein MinD Alide_2551 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain Alide_2551 IPR025110 AMP-binding enzyme, C-terminal domain Alide_2551 IPR042099 AMP-dependent synthetase-like superfamily Alide_2551 IPR012694 Propionate--CoA ligase Alide_2551 IPR000873 AMP-dependent synthetase/ligase Alide_2551 IPR020845 AMP-binding, conserved site Alide_2553 IPR012938 Glucose/Sorbosone dehydrogenase Alide_2553 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase Alide_2553 IPR011042 Six-bladed beta-propeller, TolB-like Alide_2554 IPR036390 Winged helix DNA-binding domain superfamily Alide_2554 IPR005119 LysR, substrate-binding Alide_2554 IPR000847 Transcription regulator HTH, LysR Alide_2554 IPR037412 HTH-type transcriptional regulator IlvR, PBP2 domain Alide_2554 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2555 IPR016160 Aldehyde dehydrogenase, cysteine active site Alide_2555 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_2555 IPR015590 Aldehyde dehydrogenase domain Alide_2555 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_2555 IPR010061 Methylmalonate-semialdehyde dehydrogenase Alide_2555 IPR016161 Aldehyde/histidinol dehydrogenase Alide_2557 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_2557 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_2557 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_2557 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_2557 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_2557 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_2557 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_2559 IPR011548 3-hydroxyisobutyrate dehydrogenase Alide_2559 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Alide_2559 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Alide_2559 IPR036291 NAD(P)-binding domain superfamily Alide_2559 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site Alide_2559 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_2559 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Alide_2559 IPR015815 3-hydroxyisobutyrate dehydrogenase-related Alide_2562 IPR001926 Pyridoxal-phosphate dependent enzyme Alide_2562 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Alide_2562 IPR023026 Tryptophan synthase beta chain/beta chain-like Alide_2562 IPR006654 Tryptophan synthase, beta chain Alide_2562 IPR006653 Tryptophan synthase, beta chain, conserved site Alide_2563 IPR007416 Protein of unknown function DUF469 Alide_2564 IPR007392 D-galactarate/Altronate dehydratase, C-terminal Alide_2564 IPR017654 Galactarate dehydratase GarD-like Alide_2564 IPR013974 SAF domain Alide_2565 IPR005064 Bordetella uptake gene Alide_2565 IPR042100 Bordetella uptake gene, domain 1 Alide_2566 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Alide_2566 IPR036849 Enolase-like, C-terminal domain superfamily Alide_2566 IPR029017 Enolase-like, N-terminal Alide_2566 IPR029065 Enolase C-terminal domain-like Alide_2566 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Alide_2566 IPR034598 D-Glucarate dehydratase-like Alide_2566 IPR034593 Mandelate racemase-like Alide_2568 IPR042100 Bordetella uptake gene, domain 1 Alide_2568 IPR005064 Bordetella uptake gene Alide_2569 IPR017655 5-dehydro-4-deoxyglucarate dehydratase Alide_2569 IPR002220 DapA-like Alide_2569 IPR013785 Aldolase-type TIM barrel Alide_2570 IPR005064 Bordetella uptake gene Alide_2570 IPR042100 Bordetella uptake gene, domain 1 Alide_2571 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Alide_2571 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Alide_2571 IPR036291 NAD(P)-binding domain superfamily Alide_2572 IPR029017 Enolase-like, N-terminal Alide_2572 IPR029065 Enolase C-terminal domain-like Alide_2572 IPR017653 Glucarate dehydratase Alide_2572 IPR034598 D-Glucarate dehydratase-like Alide_2572 IPR034593 Mandelate racemase-like Alide_2572 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Alide_2572 IPR036849 Enolase-like, C-terminal domain superfamily Alide_2573 IPR016161 Aldehyde/histidinol dehydrogenase Alide_2573 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_2573 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Alide_2573 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_2573 IPR015590 Aldehyde dehydrogenase domain Alide_2573 IPR016160 Aldehyde dehydrogenase, cysteine active site Alide_2574 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase Alide_2574 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal Alide_2574 IPR016181 Acyl-CoA N-acyltransferase Alide_2575 IPR016181 Acyl-CoA N-acyltransferase Alide_2575 IPR017138 Aspartate/glutamate leucyltransferase Alide_2575 IPR030700 N-end rule aminoacyl transferase Alide_2575 IPR007472 N-end rule aminoacyl transferase, C-terminal Alide_2575 IPR007471 N-end aminoacyl transferase, N-terminal Alide_2576 IPR011051 RmlC-like cupin domain superfamily Alide_2576 IPR012093 Pirin Alide_2576 IPR003829 Pirin, N-terminal domain Alide_2576 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain Alide_2576 IPR014710 RmlC-like jelly roll fold Alide_2577 IPR036390 Winged helix DNA-binding domain superfamily Alide_2577 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2577 IPR005119 LysR, substrate-binding Alide_2577 IPR000847 Transcription regulator HTH, LysR Alide_2578 IPR014102 Phytoene desaturase Alide_2578 IPR002937 Amine oxidase Alide_2578 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2579 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_2579 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Alide_2579 IPR022380 Glutamyl-Q tRNA(Asp) synthetase Alide_2579 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Alide_2580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_2580 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type Alide_2581 IPR029787 Nucleotide cyclase Alide_2581 IPR033424 Membrane-associated sensor domain Alide_2581 IPR000160 GGDEF domain Alide_2582 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain Alide_2582 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria Alide_2582 IPR003156 DHHA1 domain Alide_2582 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily Alide_2582 IPR009000 Translation protein, beta-barrel domain superfamily Alide_2582 IPR002318 Alanine-tRNA ligase, class IIc Alide_2582 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily Alide_2582 IPR012947 Threonyl/alanyl tRNA synthetase, SAD Alide_2582 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal Alide_2583 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA Alide_2583 IPR013785 Aldolase-type TIM barrel Alide_2583 IPR002220 DapA-like Alide_2583 IPR020625 Schiff base-forming aldolase, active site Alide_2583 IPR020624 Schiff base-forming aldolase, conserved site Alide_2585 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Alide_2585 IPR004681 TRAP transporter large membrane protein DctM Alide_2586 IPR018389 TRAP transporter solute receptor DctP/TeaA Alide_2586 IPR038404 TRAP transporter solute receptor DctP superfamily Alide_2587 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily Alide_2587 IPR003767 Malate/L-lactate dehydrogenase-like Alide_2588 IPR011711 GntR, C-terminal Alide_2588 IPR000524 Transcription regulator HTH, GntR Alide_2588 IPR036390 Winged helix DNA-binding domain superfamily Alide_2588 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2588 IPR008920 Transcription regulator FadR/GntR, C-terminal Alide_2589 IPR020103 Pseudouridine synthase, catalytic domain superfamily Alide_2589 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Alide_2589 IPR006145 Pseudouridine synthase, RsuA/RluA Alide_2590 IPR003781 CoA-binding Alide_2590 IPR000182 GNAT domain Alide_2590 IPR036291 NAD(P)-binding domain superfamily Alide_2590 IPR013815 ATP-grasp fold, subdomain 1 Alide_2590 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Alide_2590 IPR016102 Succinyl-CoA synthetase-like Alide_2590 IPR016181 Acyl-CoA N-acyltransferase Alide_2590 IPR011761 ATP-grasp fold Alide_2591 IPR001296 Glycosyl transferase, family 1 Alide_2591 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal Alide_2591 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily Alide_2591 IPR039901 3-deoxy-D-manno-octulosonic acid transferase Alide_2592 IPR016066 Alpha-D-phosphohexomutase, conserved site Alide_2592 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily Alide_2592 IPR005843 Alpha-D-phosphohexomutase, C-terminal Alide_2592 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Alide_2592 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Alide_2592 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Alide_2592 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Alide_2592 IPR005841 Alpha-D-phosphohexomutase superfamily Alide_2593 IPR042100 Bordetella uptake gene, domain 1 Alide_2593 IPR005064 Bordetella uptake gene Alide_2594 IPR042100 Bordetella uptake gene, domain 1 Alide_2594 IPR005064 Bordetella uptake gene Alide_2595 IPR011051 RmlC-like cupin domain superfamily Alide_2595 IPR014710 RmlC-like jelly roll fold Alide_2595 IPR021120 KduI/IolB isomerase Alide_2595 IPR023770 5-deoxy-glucuronate isomerase, Bacilli Alide_2595 IPR024203 5-deoxy-glucuronate isomerase, IolB Alide_2596 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily Alide_2596 IPR030830 5-Dehydro-2-deoxygluconokinase Alide_2596 IPR011611 Carbohydrate kinase PfkB Alide_2596 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Alide_2596 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes Alide_2596 IPR029056 Ribokinase-like Alide_2598 IPR009057 Homeobox-like domain superfamily Alide_2598 IPR004026 Ada DNA repair, metal-binding Alide_2598 IPR018060 DNA binding HTH domain, AraC-type Alide_2598 IPR018062 HTH domain AraC-type, conserved site Alide_2598 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA Alide_2598 IPR035451 Ada-like domain superfamily Alide_2599 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site Alide_2599 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2599 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily Alide_2599 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding Alide_2599 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Alide_2599 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain Alide_2599 IPR023546 Methylated-DNA--protein-cysteine methyltransferase Alide_2601 IPR032026 Adenylate cyclase regulatory domain Alide_2601 IPR029787 Nucleotide cyclase Alide_2601 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase Alide_2602 IPR003507 Peptidase family S66 Alide_2602 IPR040921 LD-carboxypeptidase, C-terminal Alide_2602 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Alide_2602 IPR040449 LD-carboxypeptidase, N-terminal Alide_2602 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal Alide_2602 IPR029062 Class I glutamine amidotransferase-like Alide_2603 IPR028883 tRNA-specific adenosine deaminase Alide_2603 IPR016193 Cytidine deaminase-like Alide_2603 IPR002125 Cytidine and deoxycytidylate deaminase domain Alide_2603 IPR016192 APOBEC/CMP deaminase, zinc-binding Alide_2605 IPR020988 Peptidase U32, collagenase Alide_2605 IPR001539 Peptidase U32 Alide_2606 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase Alide_2606 IPR015424 Pyridoxal phosphate-dependent transferase Alide_2606 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_2606 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_2606 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Alide_2607 IPR024775 DinB-like domain Alide_2607 IPR034660 DinB/YfiT-like putative metalloenzymes Alide_2607 IPR042095 Sulfatase-modifying factor enzyme superfamily Alide_2607 IPR032890 Hercynine oxygenase, Actinobacteria Alide_2607 IPR005532 Sulfatase-modifying factor enzyme Alide_2607 IPR017806 Ergothioneine biosynthesis protein EgtB Alide_2607 IPR016187 C-type lectin fold Alide_2608 IPR035094 Histidine N-alpha-methyltransferase Alide_2608 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_2608 IPR019257 Histidine-specific methyltransferase, SAM-dependent Alide_2608 IPR032888 Histidine N-alpha-methyltransferase, Actinobacteria-type Alide_2608 IPR017804 Methyltransferase EgtD-like Alide_2609 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Alide_2609 IPR005618 Outer membrane protein, OmpW Alide_2610 IPR008526 Inner membrane protein YedI Alide_2611 IPR036676 PurM-like, C-terminal domain superfamily Alide_2611 IPR036921 PurM-like, N-terminal domain superfamily Alide_2611 IPR029062 Class I glutamine amidotransferase-like Alide_2611 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal Alide_2611 IPR017926 Glutamine amidotransferase Alide_2611 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily Alide_2611 IPR010073 Phosphoribosylformylglycinamidine synthase PurL Alide_2611 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain Alide_2611 IPR010918 PurM-like, C-terminal domain Alide_2612 IPR001714 Peptidase M24, methionine aminopeptidase Alide_2612 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 Alide_2612 IPR000994 Peptidase M24 Alide_2612 IPR036005 Creatinase/aminopeptidase-like Alide_2613 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme Alide_2613 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase Alide_2613 IPR002934 Polymerase, nucleotidyl transferase domain Alide_2613 IPR006674 HD domain Alide_2613 IPR003607 HD/PDEase domain Alide_2613 IPR002912 ACT domain Alide_2614 IPR017588 Uric acid permease UacT-like Alide_2614 IPR006042 Xanthine/uracil permease Alide_2614 IPR006043 Xanthine/uracil/vitamin C permease Alide_2615 IPR036821 Peptide deformylase superfamily Alide_2615 IPR023635 Peptide deformylase Alide_2616 IPR007401 Protein of unknown function DUF454 Alide_2620 IPR024084 Isopropylmalate dehydrogenase-like domain Alide_2620 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site Alide_2620 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic Alide_2622 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric Alide_2623 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily Alide_2623 IPR019833 Manganese/iron superoxide dismutase, binding site Alide_2623 IPR019832 Manganese/iron superoxide dismutase, C-terminal Alide_2623 IPR019831 Manganese/iron superoxide dismutase, N-terminal Alide_2623 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily Alide_2623 IPR001189 Manganese/iron superoxide dismutase Alide_2624 IPR025824 OB-fold nucleic acid binding domain Alide_2624 IPR020579 Exonuclease VII, large subunit, C-terminal Alide_2624 IPR003753 Exonuclease VII, large subunit Alide_2625 IPR002898 MotA/TolQ/ExbB proton channel Alide_2626 IPR003400 Biopolymer transport protein ExbD/TolR Alide_2626 IPR014168 Tol-Pal system protein TolR Alide_2627 IPR003758 Tetraacyldisaccharide 4'-kinase Alide_2627 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2628 IPR005651 Trm112-like Alide_2629 IPR003329 Acylneuraminate cytidylyltransferase Alide_2629 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase Alide_2629 IPR029044 Nucleotide-diphospho-sugar transferases Alide_2630 IPR006259 Adenylate kinase subfamily Alide_2630 IPR033690 Adenylate kinase, conserved site Alide_2630 IPR007862 Adenylate kinase, active site lid domain Alide_2630 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2630 IPR000850 Adenylate kinase/UMP-CMP kinase Alide_2631 IPR037152 L-asparaginase, N-terminal domain superfamily Alide_2631 IPR027474 L-asparaginase, N-terminal Alide_2631 IPR027475 Asparaginase/glutaminase, active site 2 Alide_2631 IPR036152 Asparaginase/glutaminase-like superfamily Alide_2631 IPR027473 L-asparaginase, C-terminal Alide_2631 IPR040919 Asparaginase/glutaminase, C-terminal Alide_2631 IPR004550 L-asparaginase, type II Alide_2631 IPR006034 Asparaginase/glutaminase-like Alide_2631 IPR020827 Asparaginase/glutaminase, active site 1 Alide_2632 IPR006200 Transcription regulator LexA Alide_2632 IPR039418 LexA-like Alide_2632 IPR036286 LexA/Signal peptidase-like superfamily Alide_2632 IPR006199 LexA repressor, DNA-binding domain Alide_2632 IPR006197 Peptidase S24, LexA-like Alide_2632 IPR015927 Peptidase S24/S26A/S26B/S26C Alide_2632 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2632 IPR036390 Winged helix DNA-binding domain superfamily Alide_2634 IPR024590 RNA helicase HrpA, C-terminal Alide_2634 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2634 IPR007502 Helicase-associated domain Alide_2634 IPR014001 Helicase superfamily 1/2, ATP-binding domain Alide_2634 IPR001650 Helicase, C-terminal Alide_2634 IPR003593 AAA+ ATPase domain Alide_2634 IPR010222 RNA helicase HrpA Alide_2634 IPR011709 Domain of unknown function DUF1605 Alide_2634 IPR011545 DEAD/DEAH box helicase domain Alide_2635 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_2635 IPR020613 Thiolase, conserved site Alide_2635 IPR020616 Thiolase, N-terminal Alide_2635 IPR020617 Thiolase, C-terminal Alide_2635 IPR016039 Thiolase-like Alide_2635 IPR002155 Thiolase Alide_2635 IPR020610 Thiolase, active site Alide_2636 IPR000873 AMP-dependent synthetase/ligase Alide_2636 IPR025110 AMP-binding enzyme, C-terminal domain Alide_2636 IPR042099 AMP-dependent synthetase-like superfamily Alide_2636 IPR020845 AMP-binding, conserved site Alide_2637 IPR003784 BioY protein Alide_2639 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2639 IPR003439 ABC transporter-like Alide_2639 IPR003593 AAA+ ATPase domain Alide_2642 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Alide_2642 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Alide_2642 IPR037523 Vicinal oxygen chelate (VOC) domain Alide_2642 IPR004361 Glyoxalase I Alide_2642 IPR018146 Glyoxalase I, conserved site Alide_2643 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2643 IPR006073 GTP binding domain Alide_2644 IPR006073 GTP binding domain Alide_2644 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2645 IPR005829 Sugar transporter, conserved site Alide_2645 IPR036259 MFS transporter superfamily Alide_2645 IPR020846 Major facilitator superfamily domain Alide_2645 IPR011701 Major facilitator superfamily Alide_2646 IPR042100 Bordetella uptake gene, domain 1 Alide_2646 IPR005064 Bordetella uptake gene Alide_2647 IPR011008 Dimeric alpha-beta barrel Alide_2647 IPR003464 Muconolactone delta-isomerase Alide_2647 IPR026029 Muconolactone isomerase domain Alide_2648 IPR029058 Alpha/Beta hydrolase fold Alide_2648 IPR026968 3-oxoadipate enol-lactonase 1/2 Alide_2648 IPR022742 Serine aminopeptidase, S33 Alide_2648 IPR000073 Alpha/beta hydrolase fold-1 Alide_2649 IPR036291 NAD(P)-binding domain superfamily Alide_2649 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_2649 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_2650 IPR015889 Intradiol ring-cleavage dioxygenase, core Alide_2650 IPR007535 Catechol dioxygenase, N-terminal Alide_2650 IPR012801 Catechol 1,2-dioxygenase, proteobacteria Alide_2650 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal Alide_2651 IPR013370 Muconate/chloromuconate cycloisomerase Alide_2651 IPR036849 Enolase-like, C-terminal domain superfamily Alide_2651 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site Alide_2651 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Alide_2651 IPR029017 Enolase-like, N-terminal Alide_2651 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Alide_2651 IPR029065 Enolase C-terminal domain-like Alide_2652 IPR005119 LysR, substrate-binding Alide_2652 IPR036390 Winged helix DNA-binding domain superfamily Alide_2652 IPR000847 Transcription regulator HTH, LysR Alide_2652 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2653 IPR031338 KDPG/KHG aldolase, active site 2 Alide_2653 IPR031337 KDPG/KHG aldolase, active site 1 Alide_2653 IPR000887 KDPG/KHG aldolase Alide_2653 IPR013785 Aldolase-type TIM barrel Alide_2654 IPR004786 6-phosphogluconate dehydratase Alide_2654 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase Alide_2654 IPR042096 Dihydroxy-acid dehydratase, C-terminal Alide_2654 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site Alide_2654 IPR037237 IlvD/EDD, N-terminal domain Alide_2655 IPR004682 TRAP transporter solute receptor, DctP family Alide_2655 IPR018389 TRAP transporter solute receptor DctP/TeaA Alide_2655 IPR038404 TRAP transporter solute receptor DctP superfamily Alide_2656 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Alide_2656 IPR004681 TRAP transporter large membrane protein DctM Alide_2657 IPR007387 TRAP transporter, small membrane protein DctQ Alide_2658 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2658 IPR006001 Carbohydrate kinase, thermoresistant glucokinase Alide_2659 IPR000843 LacI-type HTH domain Alide_2659 IPR001761 Periplasmic binding protein/LacI sugar binding domain Alide_2659 IPR028082 Periplasmic binding protein-like I Alide_2659 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Alide_2660 IPR041546 ClpA/ClpB, AAA lid domain Alide_2660 IPR028299 ClpA/B, conserved site 2 Alide_2660 IPR018368 ClpA/B, conserved site 1 Alide_2660 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA Alide_2660 IPR003593 AAA+ ATPase domain Alide_2660 IPR019489 Clp ATPase, C-terminal Alide_2660 IPR003959 ATPase, AAA-type, core Alide_2660 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2660 IPR004176 Clp, N-terminal Alide_2660 IPR001270 ClpA/B family Alide_2660 IPR036628 Clp, N-terminal domain superfamily Alide_2661 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Alide_2661 IPR003769 Adaptor protein ClpS, core Alide_2661 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Alide_2662 IPR029460 DNA polymerase, helix-hairpin-helix motif Alide_2662 IPR040982 DNA polymerase III alpha subunit finger domain Alide_2662 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain Alide_2662 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain Alide_2662 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Alide_2662 IPR016195 Polymerase/histidinol phosphatase-like Alide_2662 IPR003141 Polymerase/histidinol phosphatase, N-terminal Alide_2662 IPR004013 PHP domain Alide_2662 IPR004805 DNA polymerase III, alpha subunit Alide_2663 IPR011990 Tetratricopeptide-like helical domain superfamily Alide_2663 IPR039565 Outer membrane lipoprotein BamD-like Alide_2663 IPR017689 Outer membrane protein assembly factor BamD Alide_2664 IPR006555 ATP-dependent helicase, C-terminal Alide_2664 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type Alide_2664 IPR006935 Helicase/UvrB, N-terminal Alide_2664 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2664 IPR014001 Helicase superfamily 1/2, ATP-binding domain Alide_2665 IPR001932 PPM-type phosphatase domain Alide_2665 IPR015655 Protein phosphatase 2C family Alide_2665 IPR036457 PPM-type phosphatase domain superfamily Alide_2667 IPR030870 Cell division protein ZapE Alide_2667 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2667 IPR005654 ATPase, AFG1-like Alide_2668 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Alide_2668 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I Alide_2668 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Alide_2668 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2668 IPR006258 Dihydrolipoamide dehydrogenase Alide_2668 IPR023753 FAD/NAD(P)-binding domain Alide_2668 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Alide_2669 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain Alide_2669 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Alide_2669 IPR000089 Biotin/lipoyl attachment Alide_2669 IPR036625 E3-binding domain superfamily Alide_2669 IPR004167 Peripheral subunit-binding domain Alide_2669 IPR011053 Single hybrid motif Alide_2669 IPR006255 Dihydrolipoamide succinyltransferase Alide_2669 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Alide_2670 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal Alide_2670 IPR005475 Transketolase-like, pyrimidine-binding domain Alide_2670 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily Alide_2670 IPR029061 Thiamin diphosphate-binding fold Alide_2670 IPR001017 Dehydrogenase, E1 component Alide_2670 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain Alide_2670 IPR011603 2-oxoglutarate dehydrogenase E1 component Alide_2671 IPR002549 Transmembrane protein TqsA-like Alide_2672 IPR005064 Bordetella uptake gene Alide_2672 IPR042100 Bordetella uptake gene, domain 1 Alide_2675 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2675 IPR000847 Transcription regulator HTH, LysR Alide_2675 IPR005119 LysR, substrate-binding Alide_2675 IPR036390 Winged helix DNA-binding domain superfamily Alide_2676 IPR006016 UspA Alide_2676 IPR006015 Universal stress protein A family Alide_2677 IPR017871 ABC transporter, conserved site Alide_2677 IPR003593 AAA+ ATPase domain Alide_2677 IPR003439 ABC transporter-like Alide_2677 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Alide_2677 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2678 IPR035906 MetI-like superfamily Alide_2678 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_2678 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Alide_2679 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_2679 IPR035906 MetI-like superfamily Alide_2681 IPR030678 Peptide/nickel binding protein, MppA-type Alide_2681 IPR000914 Solute-binding protein family 5 domain Alide_2681 IPR039424 Solute-binding protein family 5 Alide_2682 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_2682 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) Alide_2682 IPR036291 NAD(P)-binding domain superfamily Alide_2683 IPR000620 EamA domain Alide_2684 IPR038444 DUF465 superfamily Alide_2684 IPR007420 Protein of unknown function DUF465 Alide_2685 IPR012310 DNA ligase, ATP-dependent, central Alide_2685 IPR016059 DNA ligase, ATP-dependent, conserved site Alide_2685 IPR012340 Nucleic acid-binding, OB-fold Alide_2685 IPR029319 DNA ligase, OB-like domain Alide_2686 IPR005496 Integral membrane protein TerC Alide_2686 IPR022301 Integral membrane protein YjbE Alide_2687 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_2687 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal Alide_2687 IPR011193 Ornithine/lysine/arginine decarboxylase Alide_2687 IPR000310 Orn/Lys/Arg decarboxylase, major domain Alide_2687 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_2687 IPR015424 Pyridoxal phosphate-dependent transferase Alide_2687 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily Alide_2687 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal Alide_2689 IPR036013 Band 7/SPFH domain superfamily Alide_2689 IPR018080 Band 7/stomatin-like, conserved site Alide_2689 IPR001107 Band 7 domain Alide_2689 IPR001972 Stomatin family Alide_2690 IPR000847 Transcription regulator HTH, LysR Alide_2690 IPR036390 Winged helix DNA-binding domain superfamily Alide_2690 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2690 IPR005119 LysR, substrate-binding Alide_2691 IPR012846 Acetolactate synthase, large subunit, biosynthetic Alide_2691 IPR039368 Acetolactate synthase large subunit, TPP binding domain Alide_2691 IPR029061 Thiamin diphosphate-binding fold Alide_2691 IPR012000 Thiamine pyrophosphate enzyme, central domain Alide_2691 IPR029035 DHS-like NAD/FAD-binding domain superfamily Alide_2691 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Alide_2691 IPR000399 TPP-binding enzyme, conserved site Alide_2691 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Alide_2692 IPR003844 Uncharacterised protein family UPF0060 Alide_2693 IPR004107 Integrase, SAM-like, N-terminal Alide_2693 IPR023009 Tyrosine recombinase XerC/XerD Alide_2693 IPR011010 DNA breaking-rejoining enzyme, catalytic core Alide_2693 IPR013762 Integrase-like, catalytic domain superfamily Alide_2693 IPR010998 Integrase/recombinase, N-terminal Alide_2693 IPR011931 Tyrosine recombinase XerC Alide_2693 IPR002104 Integrase, catalytic domain Alide_2694 IPR005025 NADPH-dependent FMN reductase-like Alide_2694 IPR014063 Arsenate resistance ArsH Alide_2694 IPR029039 Flavoprotein-like superfamily Alide_2695 IPR023214 HAD superfamily Alide_2695 IPR006068 Cation-transporting P-type ATPase, C-terminal Alide_2695 IPR004014 Cation-transporting P-type ATPase, N-terminal Alide_2695 IPR036412 HAD-like superfamily Alide_2695 IPR023299 P-type ATPase, cytoplasmic domain N Alide_2695 IPR018303 P-type ATPase, phosphorylation site Alide_2695 IPR023298 P-type ATPase, transmembrane domain superfamily Alide_2695 IPR001757 P-type ATPase Alide_2695 IPR008250 P-type ATPase, A domain superfamily Alide_2696 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2696 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Alide_2696 IPR007627 RNA polymerase sigma-70 region 2 Alide_2696 IPR039425 RNA polymerase sigma-70 like Alide_2696 IPR014284 RNA polymerase sigma-70 like domain Alide_2696 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Alide_2696 IPR013325 RNA polymerase sigma factor, region 2 Alide_2696 IPR013324 RNA polymerase sigma factor, region 3/4-like Alide_2701 IPR002524 Cation efflux protein Alide_2701 IPR023500 Zinc transporter ZitB Alide_2701 IPR027469 Cation efflux transmembrane domain superfamily Alide_2701 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Alide_2703 IPR017932 Glutamine amidotransferase type 2 domain Alide_2703 IPR026869 Putative glutamine amidotransferase type 2 Alide_2703 IPR029055 Nucleophile aminohydrolases, N-terminal Alide_2704 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Alide_2704 IPR017927 FAD-binding domain, ferredoxin reductase-type Alide_2704 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Alide_2704 IPR001433 Oxidoreductase FAD/NAD(P)-binding Alide_2704 IPR017938 Riboflavin synthase-like beta-barrel Alide_2704 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Alide_2704 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Alide_2704 IPR036010 2Fe-2S ferredoxin-like superfamily Alide_2704 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Alide_2704 IPR012675 Beta-grasp domain superfamily Alide_2705 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_2705 IPR002155 Thiolase Alide_2705 IPR020610 Thiolase, active site Alide_2705 IPR020616 Thiolase, N-terminal Alide_2705 IPR016039 Thiolase-like Alide_2705 IPR020613 Thiolase, conserved site Alide_2705 IPR020617 Thiolase, C-terminal Alide_2711 IPR025948 HTH-like domain Alide_2711 IPR001584 Integrase, catalytic core Alide_2711 IPR012337 Ribonuclease H-like superfamily Alide_2711 IPR036397 Ribonuclease H superfamily Alide_2712 IPR009057 Homeobox-like domain superfamily Alide_2712 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2712 IPR002514 Transposase IS3/IS911family Alide_2714 IPR000380 DNA topoisomerase, type IA Alide_2714 IPR034144 DNA topoisomerase 3-like, TOPRIM domain Alide_2714 IPR003601 DNA topoisomerase, type IA, domain 2 Alide_2714 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Alide_2714 IPR013497 DNA topoisomerase, type IA, central Alide_2714 IPR023406 DNA topoisomerase, type IA, active site Alide_2714 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Alide_2714 IPR023405 DNA topoisomerase, type IA, core domain Alide_2714 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Alide_2714 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Alide_2714 IPR006171 TOPRIM domain Alide_2714 IPR005738 DNA topoisomerase III Alide_2722 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2722 IPR025669 AAA domain Alide_2725 IPR000847 Transcription regulator HTH, LysR Alide_2725 IPR005119 LysR, substrate-binding Alide_2725 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2725 IPR036390 Winged helix DNA-binding domain superfamily Alide_2726 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Alide_2726 IPR001036 Acriflavin resistance protein Alide_2726 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA Alide_2727 IPR006143 RND efflux pump, membrane fusion protein Alide_2727 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Alide_2731 IPR027256 P-type ATPase, subfamily IB Alide_2731 IPR001757 P-type ATPase Alide_2731 IPR012348 Ribonucleotide reductase-like Alide_2731 IPR011017 TRASH domain Alide_2731 IPR007029 YHS domain Alide_2731 IPR036412 HAD-like superfamily Alide_2731 IPR023299 P-type ATPase, cytoplasmic domain N Alide_2731 IPR023214 HAD superfamily Alide_2731 IPR018303 P-type ATPase, phosphorylation site Alide_2731 IPR023298 P-type ATPase, transmembrane domain superfamily Alide_2731 IPR009078 Ferritin-like superfamily Alide_2731 IPR008250 P-type ATPase, A domain superfamily Alide_2732 IPR029058 Alpha/Beta hydrolase fold Alide_2732 IPR024501 Protein of unknown function DUF3141 Alide_2733 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal Alide_2733 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Alide_2733 IPR008168 Cytochrome c, class IC Alide_2733 IPR036909 Cytochrome c-like domain superfamily Alide_2733 IPR009056 Cytochrome c-like domain Alide_2733 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily Alide_2739 IPR007939 Copper resistance B precursor Alide_2740 IPR002355 Multicopper oxidase, copper-binding site Alide_2740 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_2740 IPR034284 Copper resistance protein, first cupredoxin domain Alide_2740 IPR033138 Multicopper oxidases, conserved site Alide_2740 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Alide_2740 IPR008972 Cupredoxin Alide_2740 IPR034282 Copper resistance protein CopA, second cupredoxin domain Alide_2740 IPR006376 Copper-resistance protein CopA Alide_2740 IPR011706 Multicopper oxidase, type 2 Alide_2740 IPR001117 Multicopper oxidase, type 1 Alide_2740 IPR034279 Copper resistance protein, third cupredoxin domain Alide_2740 IPR011707 Multicopper oxidase, type 3 Alide_2741 IPR011006 CheY-like superfamily Alide_2741 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_2741 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response Alide_2741 IPR001789 Signal transduction response regulator, receiver domain Alide_2741 IPR039420 Transcriptional regulatory protein WalR-like Alide_2741 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2742 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_2742 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_2742 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_2742 IPR005467 Histidine kinase domain Alide_2742 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_2742 IPR003594 Histidine kinase/HSP90-like ATPase Alide_2742 IPR003660 HAMP domain Alide_2742 IPR006290 Heavy metal sensor kinase Alide_2745 IPR033138 Multicopper oxidases, conserved site Alide_2745 IPR008972 Cupredoxin Alide_2745 IPR002355 Multicopper oxidase, copper-binding site Alide_2745 IPR011707 Multicopper oxidase, type 3 Alide_2745 IPR011706 Multicopper oxidase, type 2 Alide_2747 IPR036397 Ribonuclease H superfamily Alide_2747 IPR012337 Ribonuclease H-like superfamily Alide_2747 IPR001584 Integrase, catalytic core Alide_2747 IPR025948 HTH-like domain Alide_2750 IPR018303 P-type ATPase, phosphorylation site Alide_2750 IPR027256 P-type ATPase, subfamily IB Alide_2750 IPR036163 Heavy metal-associated domain superfamily Alide_2750 IPR006121 Heavy metal-associated domain, HMA Alide_2750 IPR001757 P-type ATPase Alide_2750 IPR023299 P-type ATPase, cytoplasmic domain N Alide_2750 IPR006122 Heavy metal-associated domain, copper ion-binding Alide_2750 IPR023298 P-type ATPase, transmembrane domain superfamily Alide_2750 IPR008250 P-type ATPase, A domain superfamily Alide_2750 IPR036412 HAD-like superfamily Alide_2750 IPR023214 HAD superfamily Alide_2750 IPR017969 Heavy-metal-associated, conserved site Alide_2751 IPR038390 Metal-sensitive transcriptional repressor superfamily Alide_2751 IPR003735 Metal-sensitive transcriptional repressor Alide_2752 IPR036390 Winged helix DNA-binding domain superfamily Alide_2752 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2752 IPR000847 Transcription regulator HTH, LysR Alide_2752 IPR005119 LysR, substrate-binding Alide_2754 IPR000119 Histone-like DNA-binding protein Alide_2754 IPR020816 Histone-like DNA-binding protein, conserved site Alide_2754 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily Alide_2758 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2758 IPR005119 LysR, substrate-binding Alide_2758 IPR000847 Transcription regulator HTH, LysR Alide_2758 IPR036390 Winged helix DNA-binding domain superfamily Alide_2759 IPR024084 Isopropylmalate dehydrogenase-like domain Alide_2759 IPR011829 Tartrate dehydrogenase Alide_2759 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site Alide_2760 IPR002641 Patatin-like phospholipase domain Alide_2760 IPR001423 Lysophospholipase patatin, conserved site Alide_2760 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Alide_2761 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2761 IPR005119 LysR, substrate-binding Alide_2761 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain Alide_2761 IPR036390 Winged helix DNA-binding domain superfamily Alide_2761 IPR000847 Transcription regulator HTH, LysR Alide_2762 IPR005064 Bordetella uptake gene Alide_2762 IPR042100 Bordetella uptake gene, domain 1 Alide_2763 IPR017654 Galactarate dehydratase GarD-like Alide_2763 IPR007392 D-galactarate/Altronate dehydratase, C-terminal Alide_2763 IPR013974 SAF domain Alide_2764 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_2764 IPR010102 Succinate semialdehyde dehydrogenase Alide_2764 IPR015590 Aldehyde dehydrogenase domain Alide_2764 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Alide_2764 IPR016161 Aldehyde/histidinol dehydrogenase Alide_2764 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_2764 IPR016160 Aldehyde dehydrogenase, cysteine active site Alide_2765 IPR040442 Pyruvate kinase-like domain superfamily Alide_2765 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_2765 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase Alide_2765 IPR005000 HpcH/HpaI aldolase/citrate lyase domain Alide_2767 IPR015942 Asp/Glu/hydantoin racemase Alide_2767 IPR001920 Asp/Glu racemase Alide_2767 IPR018187 Asp/Glu racemase, active site 1 Alide_2767 IPR033134 Asp/Glu racemase, active site 2 Alide_2767 IPR004391 Glutamate racemase Alide_2770 IPR032466 Metal-dependent hydrolase Alide_2770 IPR011059 Metal-dependent hydrolase, composite domain superfamily Alide_2770 IPR005920 Imidazolonepropionase Alide_2770 IPR006680 Amidohydrolase-related Alide_2771 IPR010282 Uncharacterised protein family HutD/Ves Alide_2771 IPR011051 RmlC-like cupin domain superfamily Alide_2771 IPR014710 RmlC-like jelly roll fold Alide_2772 IPR003593 AAA+ ATPase domain Alide_2772 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2772 IPR017871 ABC transporter, conserved site Alide_2772 IPR003439 ABC transporter-like Alide_2772 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type Alide_2773 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain Alide_2773 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_2773 IPR035906 MetI-like superfamily Alide_2776 IPR023636 Urocanase conserved site Alide_2776 IPR038364 Urocanase, central domain superfamily Alide_2776 IPR035401 Urocanase, C-terminal domain Alide_2776 IPR023637 Urocanase Alide_2776 IPR035400 Urocanase, N-terminal domain Alide_2776 IPR035085 Urocanase, Rossmann-like domain Alide_2776 IPR036190 Urocanase superfamily Alide_2777 IPR026030 Purine-cytosine permease Fcy2/21/22 Alide_2777 IPR038271 Purine-cytosine permease superfamily Alide_2777 IPR001248 Purine-cytosine permease Alide_2778 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Alide_2778 IPR010248 Histidine utilization repressor Alide_2778 IPR036390 Winged helix DNA-binding domain superfamily Alide_2778 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2778 IPR000524 Transcription regulator HTH, GntR Alide_2778 IPR011663 UbiC transcription regulator-associated Alide_2779 IPR024083 Fumarase/histidase, N-terminal Alide_2779 IPR008948 L-Aspartase-like Alide_2779 IPR005921 Histidine ammonia-lyase Alide_2779 IPR001106 Aromatic amino acid lyase Alide_2779 IPR022313 Phenylalanine/histidine ammonia-lyases, active site Alide_2780 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Alide_2780 IPR036390 Winged helix DNA-binding domain superfamily Alide_2780 IPR010248 Histidine utilization repressor Alide_2780 IPR000524 Transcription regulator HTH, GntR Alide_2780 IPR011663 UbiC transcription regulator-associated Alide_2780 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2781 IPR003593 AAA+ ATPase domain Alide_2781 IPR003439 ABC transporter-like Alide_2781 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2782 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_2782 IPR035906 MetI-like superfamily Alide_2785 IPR023606 CoA-transferase family III domain superfamily Alide_2785 IPR003673 CoA-transferase family III Alide_2786 IPR005119 LysR, substrate-binding Alide_2786 IPR000847 Transcription regulator HTH, LysR Alide_2786 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2786 IPR036390 Winged helix DNA-binding domain superfamily Alide_2787 IPR005064 Bordetella uptake gene Alide_2787 IPR042100 Bordetella uptake gene, domain 1 Alide_2788 IPR042100 Bordetella uptake gene, domain 1 Alide_2788 IPR005064 Bordetella uptake gene Alide_2789 IPR000891 Pyruvate carboxyltransferase Alide_2789 IPR013785 Aldolase-type TIM barrel Alide_2790 IPR003673 CoA-transferase family III Alide_2790 IPR023606 CoA-transferase family III domain superfamily Alide_2791 IPR036390 Winged helix DNA-binding domain superfamily Alide_2791 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2791 IPR000847 Transcription regulator HTH, LysR Alide_2791 IPR005119 LysR, substrate-binding Alide_2793 IPR015365 Elongation factor P, C-terminal Alide_2793 IPR012340 Nucleic acid-binding, OB-fold Alide_2793 IPR014722 Ribosomal protein L2, domain 2 Alide_2793 IPR020599 Translation elongation factor P/YeiP Alide_2793 IPR013185 Translation elongation factor, KOW-like Alide_2793 IPR008991 Translation protein SH3-like domain superfamily Alide_2793 IPR013852 Translation elongation factor P/YeiP, conserved site Alide_2793 IPR001059 Translation elongation factor P/YeiP, central Alide_2793 IPR011768 Translation elongation factor P Alide_2795 IPR019899 Sodium/solute symporter, VC2705 subfamily Alide_2795 IPR001734 Sodium/solute symporter Alide_2795 IPR038377 Sodium/glucose symporter superfamily Alide_2797 IPR006319 Phosphoenolpyruvate synthase Alide_2797 IPR018274 PEP-utilising enzyme, active site Alide_2797 IPR000121 PEP-utilising enzyme, C-terminal Alide_2797 IPR040442 Pyruvate kinase-like domain superfamily Alide_2797 IPR008279 PEP-utilising enzyme, mobile domain Alide_2797 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_2797 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding Alide_2797 IPR036637 Phosphohistidine domain superfamily Alide_2797 IPR023151 PEP-utilising enzyme, conserved site Alide_2797 IPR013815 ATP-grasp fold, subdomain 1 Alide_2798 IPR005177 Bifunctional kinase-pyrophosphorylase Alide_2798 IPR026530 Phosphoenolpyruvate synthase regulatory protein Alide_2799 IPR001036 Acriflavin resistance protein Alide_2799 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Alide_2799 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA Alide_2804 IPR020835 Catalase superfamily Alide_2804 IPR010582 Catalase immune-responsive domain Alide_2804 IPR002226 Catalase haem-binding site Alide_2804 IPR024708 Catalase active site Alide_2804 IPR040333 Catalase, clade 3 Alide_2804 IPR037060 Catalase core domain superfamily Alide_2804 IPR011614 Catalase core domain Alide_2804 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 Alide_2804 IPR018028 Catalase, mono-functional, haem-containing Alide_2805 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2805 IPR023753 FAD/NAD(P)-binding domain Alide_2805 IPR012081 Alkyl hydroperoxide reductase subunit F Alide_2805 IPR012336 Thioredoxin-like fold Alide_2805 IPR002109 Glutaredoxin Alide_2805 IPR036249 Thioredoxin-like superfamily Alide_2805 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site Alide_2806 IPR036249 Thioredoxin-like superfamily Alide_2806 IPR019479 Peroxiredoxin, C-terminal Alide_2806 IPR024706 Peroxiredoxin, AhpC-type Alide_2806 IPR013766 Thioredoxin domain Alide_2806 IPR017559 Alkyl hydroperoxide reductase subunit C Alide_2806 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Alide_2807 IPR009040 Ferritin-like diiron domain Alide_2807 IPR009078 Ferritin-like superfamily Alide_2807 IPR002024 Bacterioferritin Alide_2807 IPR008331 Ferritin/DPS protein domain Alide_2807 IPR012347 Ferritin-like Alide_2808 IPR023559 Flagellar transcriptional activator FlhD Alide_2808 IPR036194 Flagellar transcriptional activator FlhD superfamily Alide_2809 IPR007944 Flagellar transcriptional activator FlhC Alide_2810 IPR021135 Phosphoenolpyruvate carboxylase Alide_2810 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type Alide_2810 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site Alide_2810 IPR033129 Phosphoenolpyruvate carboxylase, His active site Alide_2810 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_2811 IPR022417 Porphobilinogen deaminase, N-terminal Alide_2811 IPR022418 Porphobilinogen deaminase, C-terminal Alide_2811 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily Alide_2811 IPR000860 Porphobilinogen deaminase Alide_2815 IPR036927 Cytochrome c oxidase-like, subunit I superfamily Alide_2815 IPR004677 Cytochrome c oxidase cbb3-type, subunit I Alide_2815 IPR023616 Cytochrome c oxidase-like, subunit I domain Alide_2815 IPR000883 Cytochrome c oxidase subunit I Alide_2815 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site Alide_2820 IPR002303 Valine-tRNA ligase Alide_2820 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Alide_2820 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm Alide_2820 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily Alide_2820 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm Alide_2820 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Alide_2820 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Alide_2820 IPR002300 Aminoacyl-tRNA synthetase, class Ia Alide_2820 IPR033705 Valyl tRNA synthetase, anticodon-binding domain Alide_2820 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Alide_2820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_2821 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type Alide_2821 IPR005835 Nucleotidyl transferase domain Alide_2821 IPR029044 Nucleotide-diphospho-sugar transferases Alide_2822 IPR001455 TusA-like domain Alide_2822 IPR036868 TusA-like domain superfamily Alide_2823 IPR022925 NADH pyrophosphatase NudC Alide_2823 IPR015797 NUDIX hydrolase-like domain superfamily Alide_2823 IPR015375 NADH pyrophosphatase-like, N-terminal Alide_2823 IPR000086 NUDIX hydrolase domain Alide_2823 IPR020084 NUDIX hydrolase, conserved site Alide_2823 IPR015376 Zinc ribbon, NADH pyrophosphatase Alide_2824 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Alide_2824 IPR005858 Cysteine synthase CysM Alide_2824 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site Alide_2824 IPR001926 Pyridoxal-phosphate dependent enzyme Alide_2824 IPR005856 Cysteine synthase Alide_2826 IPR042217 Type IV secretion system, VirB10/TrbI Alide_2826 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Alide_2827 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily Alide_2827 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Alide_2827 IPR014142 P-type conjugative transfer protein TrbG Alide_2827 IPR033645 VirB9/CagX/TrbG, C-terminal Alide_2832 IPR003593 AAA+ ATPase domain Alide_2832 IPR004346 CagE, TrbE, VirB component of type IV transporter system Alide_2832 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain Alide_2832 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2834 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 Alide_2835 IPR001482 Type II/IV secretion system protein Alide_2835 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2835 IPR014149 Conjugative transfer, TrbB Alide_2837 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2837 IPR003688 Type IV secretion system protein TraG/VirD4 Alide_2839 IPR005119 LysR, substrate-binding Alide_2839 IPR000847 Transcription regulator HTH, LysR Alide_2839 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2839 IPR036390 Winged helix DNA-binding domain superfamily Alide_2841 IPR012147 Phosphate acetyl/butyryltransferase Alide_2841 IPR002505 Phosphate acetyl/butaryl transferase Alide_2842 IPR006016 UspA Alide_2842 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_2842 IPR006015 Universal stress protein A family Alide_2843 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_2843 IPR011283 Acetoacetyl-CoA reductase Alide_2843 IPR036291 NAD(P)-binding domain superfamily Alide_2843 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_2845 IPR000073 Alpha/beta hydrolase fold-1 Alide_2845 IPR029058 Alpha/Beta hydrolase fold Alide_2845 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I Alide_2845 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain Alide_2846 IPR023769 Nucleoid occlusion factor SlmA Alide_2846 IPR009057 Homeobox-like domain superfamily Alide_2846 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Alide_2846 IPR001647 DNA-binding HTH domain, TetR-type Alide_2848 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Alide_2848 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG Alide_2849 IPR003593 AAA+ ATPase domain Alide_2849 IPR003439 ABC transporter-like Alide_2849 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2849 IPR017871 ABC transporter, conserved site Alide_2850 IPR000412 ABC-2 transporter Alide_2851 IPR000412 ABC-2 transporter Alide_2852 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Alide_2852 IPR003423 Outer membrane efflux protein Alide_2853 IPR018211 Alcohol dehydrogenase, iron-type, conserved site Alide_2853 IPR039697 Iron-type alcohol dehydrogenase-like Alide_2853 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA Alide_2855 IPR001279 Metallo-beta-lactamase Alide_2855 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Alide_2855 IPR022712 Beta-Casp domain Alide_2855 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Alide_2856 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal Alide_2856 IPR031100 LOG family Alide_2856 IPR021826 Domain of unknown function DUF3412 Alide_2856 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily Alide_2859 IPR023865 Aliphatic acid kinase, short-chain, conserved site Alide_2859 IPR004372 Acetate/propionate kinase Alide_2859 IPR000890 Aliphatic acid kinase, short-chain Alide_2860 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase Alide_2860 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal Alide_2860 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site Alide_2860 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Alide_2860 IPR029061 Thiamin diphosphate-binding fold Alide_2860 IPR023962 Probable phosphoketolase Alide_2860 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal Alide_2860 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site Alide_2865 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Alide_2865 IPR039425 RNA polymerase sigma-70 like Alide_2865 IPR007627 RNA polymerase sigma-70 region 2 Alide_2865 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Alide_2865 IPR014284 RNA polymerase sigma-70 like domain Alide_2865 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2865 IPR013325 RNA polymerase sigma factor, region 2 Alide_2865 IPR014286 RNA polymerase sigma-70 RpoE type Alide_2865 IPR013324 RNA polymerase sigma factor, region 3/4-like Alide_2868 IPR017927 FAD-binding domain, ferredoxin reductase-type Alide_2868 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Alide_2868 IPR036010 2Fe-2S ferredoxin-like superfamily Alide_2868 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Alide_2868 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Alide_2868 IPR012675 Beta-grasp domain superfamily Alide_2868 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Alide_2868 IPR017938 Riboflavin synthase-like beta-barrel Alide_2868 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Alide_2868 IPR001433 Oxidoreductase FAD/NAD(P)-binding Alide_2869 IPR024932 Flavin transferase ApbE Alide_2869 IPR003374 ApbE-like superfamily Alide_2869 IPR042159 Flavin-trafficking protein ApbE Alide_2871 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Alide_2871 IPR016174 Di-haem cytochrome, transmembrane Alide_2874 IPR001757 P-type ATPase Alide_2874 IPR023298 P-type ATPase, transmembrane domain superfamily Alide_2874 IPR023214 HAD superfamily Alide_2874 IPR036412 HAD-like superfamily Alide_2874 IPR017969 Heavy-metal-associated, conserved site Alide_2874 IPR006121 Heavy metal-associated domain, HMA Alide_2874 IPR018303 P-type ATPase, phosphorylation site Alide_2874 IPR036163 Heavy metal-associated domain superfamily Alide_2874 IPR027256 P-type ATPase, subfamily IB Alide_2874 IPR008250 P-type ATPase, A domain superfamily Alide_2874 IPR023299 P-type ATPase, cytoplasmic domain N Alide_2876 IPR036286 LexA/Signal peptidase-like superfamily Alide_2876 IPR019533 Peptidase S26 Alide_2876 IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF Alide_2879 IPR025948 HTH-like domain Alide_2879 IPR001584 Integrase, catalytic core Alide_2879 IPR012337 Ribonuclease H-like superfamily Alide_2879 IPR036397 Ribonuclease H superfamily Alide_2880 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2880 IPR002514 Transposase IS3/IS911family Alide_2880 IPR009057 Homeobox-like domain superfamily Alide_2883 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_2883 IPR001753 Enoyl-CoA hydratase/isomerase Alide_2883 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_2883 IPR029045 ClpP/crotonase-like domain superfamily Alide_2885 IPR020845 AMP-binding, conserved site Alide_2885 IPR000873 AMP-dependent synthetase/ligase Alide_2885 IPR042099 AMP-dependent synthetase-like superfamily Alide_2885 IPR010192 2-succinylbenzoate--CoA ligase Alide_2885 IPR025110 AMP-binding enzyme, C-terminal domain Alide_2886 IPR000891 Pyruvate carboxyltransferase Alide_2886 IPR013785 Aldolase-type TIM barrel Alide_2887 IPR001882 Biotin-binding site Alide_2887 IPR005481 Biotin carboxylase-like, N-terminal domain Alide_2887 IPR000089 Biotin/lipoyl attachment Alide_2887 IPR011761 ATP-grasp fold Alide_2887 IPR016185 Pre-ATP-grasp domain superfamily Alide_2887 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Alide_2887 IPR011053 Single hybrid motif Alide_2887 IPR011054 Rudiment single hybrid motif Alide_2887 IPR011764 Biotin carboxylation domain Alide_2887 IPR005482 Biotin carboxylase, C-terminal Alide_2888 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal Alide_2888 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal Alide_2888 IPR029045 ClpP/crotonase-like domain superfamily Alide_2888 IPR034733 Acetyl-CoA carboxylase Alide_2889 IPR028154 AMP-dependent ligase, C-terminal Alide_2889 IPR000873 AMP-dependent synthetase/ligase Alide_2889 IPR011880 Phenylacetate-CoA ligase Alide_2889 IPR042099 AMP-dependent synthetase-like superfamily Alide_2890 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_2890 IPR001753 Enoyl-CoA hydratase/isomerase Alide_2890 IPR029045 ClpP/crotonase-like domain superfamily Alide_2890 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_2892 IPR023059 Foldase protein PrsA Alide_2892 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Alide_2892 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Alide_2892 IPR027304 Trigger factor/SurA domain superfamily Alide_2893 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily Alide_2893 IPR020816 Histone-like DNA-binding protein, conserved site Alide_2893 IPR000119 Histone-like DNA-binding protein Alide_2894 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial Alide_2894 IPR000462 CDP-alcohol phosphatidyltransferase Alide_2894 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Alide_2895 IPR036876 UVR domain superfamily Alide_2895 IPR001162 UvrC family homology region Alide_2895 IPR038476 UvrC homology region 2 superfamily Alide_2895 IPR001943 UVR domain Alide_2895 IPR010994 RuvA domain 2-like Alide_2895 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Alide_2895 IPR035901 GIY-YIG endonuclease superfamily Alide_2895 IPR000305 GIY-YIG endonuclease Alide_2895 IPR004791 UvrABC system, subunit C Alide_2899 IPR036390 Winged helix DNA-binding domain superfamily Alide_2899 IPR014757 Transcription regulator IclR, C-terminal Alide_2899 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2899 IPR029016 GAF-like domain superfamily Alide_2899 IPR005471 Transcription regulator IclR, N-terminal Alide_2900 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_2900 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_2900 IPR036291 NAD(P)-binding domain superfamily Alide_2901 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_2901 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_2901 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_2901 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_2901 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_2901 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_2901 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_2902 IPR000873 AMP-dependent synthetase/ligase Alide_2902 IPR020459 AMP-binding Alide_2902 IPR025110 AMP-binding enzyme, C-terminal domain Alide_2902 IPR020845 AMP-binding, conserved site Alide_2902 IPR042099 AMP-dependent synthetase-like superfamily Alide_2904 IPR017871 ABC transporter, conserved site Alide_2904 IPR003593 AAA+ ATPase domain Alide_2904 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_2904 IPR003439 ABC transporter-like Alide_2904 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2905 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2905 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Alide_2905 IPR017871 ABC transporter, conserved site Alide_2905 IPR003439 ABC transporter-like Alide_2905 IPR003593 AAA+ ATPase domain Alide_2906 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal Alide_2906 IPR001851 ABC transporter, permease Alide_2907 IPR001851 ABC transporter, permease Alide_2908 IPR042100 Bordetella uptake gene, domain 1 Alide_2908 IPR005064 Bordetella uptake gene Alide_2909 IPR002299 Porin, Neisseria sp. type Alide_2909 IPR023614 Porin domain superfamily Alide_2909 IPR033900 Porin domain, Gram-negative type Alide_2911 IPR001753 Enoyl-CoA hydratase/isomerase Alide_2911 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_2911 IPR029045 ClpP/crotonase-like domain superfamily Alide_2911 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_2912 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent Alide_2912 IPR016161 Aldehyde/histidinol dehydrogenase Alide_2912 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_2912 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Alide_2912 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_2912 IPR015590 Aldehyde dehydrogenase domain Alide_2913 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_2913 IPR016161 Aldehyde/histidinol dehydrogenase Alide_2913 IPR015590 Aldehyde dehydrogenase domain Alide_2913 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Alide_2913 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_2913 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent Alide_2915 IPR005064 Bordetella uptake gene Alide_2915 IPR042100 Bordetella uptake gene, domain 1 Alide_2917 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_2917 IPR016161 Aldehyde/histidinol dehydrogenase Alide_2917 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Alide_2917 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_2917 IPR015590 Aldehyde dehydrogenase domain Alide_2917 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent Alide_2918 IPR013149 Alcohol dehydrogenase, C-terminal Alide_2918 IPR013154 Alcohol dehydrogenase, N-terminal Alide_2918 IPR036291 NAD(P)-binding domain superfamily Alide_2918 IPR020843 Polyketide synthase, enoylreductase domain Alide_2918 IPR011032 GroES-like superfamily Alide_2918 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Alide_2919 IPR028081 Leucine-binding protein domain Alide_2919 IPR000709 Leu/Ile/Val-binding protein Alide_2919 IPR028082 Periplasmic binding protein-like I Alide_2920 IPR001851 ABC transporter, permease Alide_2921 IPR001851 ABC transporter, permease Alide_2921 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal Alide_2922 IPR003593 AAA+ ATPase domain Alide_2922 IPR017871 ABC transporter, conserved site Alide_2922 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Alide_2922 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2922 IPR003439 ABC transporter-like Alide_2923 IPR003593 AAA+ ATPase domain Alide_2923 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_2923 IPR017871 ABC transporter, conserved site Alide_2923 IPR003439 ABC transporter-like Alide_2923 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2924 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase Alide_2924 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_2924 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2925 IPR006475 Citrate lyase, beta subunit, bacteria Alide_2925 IPR040442 Pyruvate kinase-like domain superfamily Alide_2925 IPR011206 Citrate lyase beta subunit-like Alide_2925 IPR005000 HpcH/HpaI aldolase/citrate lyase domain Alide_2925 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_2926 IPR003673 CoA-transferase family III Alide_2926 IPR023606 CoA-transferase family III domain superfamily Alide_2926 IPR017659 Formyl-CoA:oxalate CoA-transferase Alide_2927 IPR029069 HotDog domain superfamily Alide_2928 IPR029035 DHS-like NAD/FAD-binding domain superfamily Alide_2928 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_2928 IPR001308 Electron transfer flavoprotein alpha subunit/FixB Alide_2928 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Alide_2928 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Alide_2928 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Alide_2928 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal Alide_2929 IPR012255 Electron transfer flavoprotein, beta subunit Alide_2929 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal Alide_2929 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_2929 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site Alide_2929 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Alide_2930 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_2930 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_2930 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_2930 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_2930 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_2930 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_2930 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_2931 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain Alide_2931 IPR005119 LysR, substrate-binding Alide_2931 IPR000847 Transcription regulator HTH, LysR Alide_2931 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2931 IPR036390 Winged helix DNA-binding domain superfamily Alide_2933 IPR003673 CoA-transferase family III Alide_2933 IPR023606 CoA-transferase family III domain superfamily Alide_2935 IPR000873 AMP-dependent synthetase/ligase Alide_2935 IPR020845 AMP-binding, conserved site Alide_2935 IPR025110 AMP-binding enzyme, C-terminal domain Alide_2935 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain Alide_2935 IPR011904 Acetate-CoA ligase Alide_2935 IPR042099 AMP-dependent synthetase-like superfamily Alide_2936 IPR002155 Thiolase Alide_2936 IPR016039 Thiolase-like Alide_2936 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_2936 IPR020610 Thiolase, active site Alide_2936 IPR020617 Thiolase, C-terminal Alide_2936 IPR020613 Thiolase, conserved site Alide_2936 IPR020616 Thiolase, N-terminal Alide_2937 IPR036291 NAD(P)-binding domain superfamily Alide_2937 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Alide_2937 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_2937 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_2939 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_2939 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_2939 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_2939 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_2939 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_2939 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_2939 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_2941 IPR029016 GAF-like domain superfamily Alide_2941 IPR036390 Winged helix DNA-binding domain superfamily Alide_2941 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2941 IPR005471 Transcription regulator IclR, N-terminal Alide_2941 IPR014757 Transcription regulator IclR, C-terminal Alide_2942 IPR029016 GAF-like domain superfamily Alide_2942 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2942 IPR036390 Winged helix DNA-binding domain superfamily Alide_2942 IPR014757 Transcription regulator IclR, C-terminal Alide_2942 IPR005471 Transcription regulator IclR, N-terminal Alide_2945 IPR005064 Bordetella uptake gene Alide_2945 IPR042100 Bordetella uptake gene, domain 1 Alide_2946 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Alide_2946 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Alide_2946 IPR027424 Glucose Oxidase, domain 2 Alide_2946 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2946 IPR012132 Glucose-methanol-choline oxidoreductase Alide_2947 IPR015590 Aldehyde dehydrogenase domain Alide_2947 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_2947 IPR016161 Aldehyde/histidinol dehydrogenase Alide_2947 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Alide_2947 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_2949 IPR003673 CoA-transferase family III Alide_2949 IPR023606 CoA-transferase family III domain superfamily Alide_2950 IPR005064 Bordetella uptake gene Alide_2950 IPR042100 Bordetella uptake gene, domain 1 Alide_2951 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_2951 IPR001753 Enoyl-CoA hydratase/isomerase Alide_2951 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_2951 IPR029045 ClpP/crotonase-like domain superfamily Alide_2952 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_2952 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_2952 IPR036291 NAD(P)-binding domain superfamily Alide_2954 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_2954 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_2954 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_2954 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_2954 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_2954 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_2954 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_2958 IPR020616 Thiolase, N-terminal Alide_2958 IPR020613 Thiolase, conserved site Alide_2958 IPR020617 Thiolase, C-terminal Alide_2958 IPR020610 Thiolase, active site Alide_2958 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_2958 IPR016039 Thiolase-like Alide_2958 IPR002155 Thiolase Alide_2958 IPR012793 Beta-ketoadipyl CoA thiolase Alide_2959 IPR042100 Bordetella uptake gene, domain 1 Alide_2959 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_2959 IPR005064 Bordetella uptake gene Alide_2960 IPR003673 CoA-transferase family III Alide_2960 IPR023606 CoA-transferase family III domain superfamily Alide_2961 IPR023606 CoA-transferase family III domain superfamily Alide_2961 IPR003673 CoA-transferase family III Alide_2964 IPR023606 CoA-transferase family III domain superfamily Alide_2964 IPR003673 CoA-transferase family III Alide_2966 IPR005064 Bordetella uptake gene Alide_2966 IPR042100 Bordetella uptake gene, domain 1 Alide_2967 IPR000847 Transcription regulator HTH, LysR Alide_2967 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_2967 IPR036390 Winged helix DNA-binding domain superfamily Alide_2967 IPR005119 LysR, substrate-binding Alide_2969 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_2969 IPR036291 NAD(P)-binding domain superfamily Alide_2970 IPR013785 Aldolase-type TIM barrel Alide_2970 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2970 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Alide_2970 IPR023753 FAD/NAD(P)-binding domain Alide_2971 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2971 IPR017871 ABC transporter, conserved site Alide_2971 IPR003439 ABC transporter-like Alide_2971 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_2971 IPR003593 AAA+ ATPase domain Alide_2972 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2972 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Alide_2972 IPR017871 ABC transporter, conserved site Alide_2972 IPR003439 ABC transporter-like Alide_2972 IPR003593 AAA+ ATPase domain Alide_2974 IPR001851 ABC transporter, permease Alide_2975 IPR028081 Leucine-binding protein domain Alide_2975 IPR000709 Leu/Ile/Val-binding protein Alide_2975 IPR028082 Periplasmic binding protein-like I Alide_2976 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_2976 IPR001753 Enoyl-CoA hydratase/isomerase Alide_2976 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_2976 IPR029045 ClpP/crotonase-like domain superfamily Alide_2977 IPR029479 Nitroreductase Alide_2977 IPR000415 Nitroreductase-like Alide_2979 IPR042100 Bordetella uptake gene, domain 1 Alide_2979 IPR005064 Bordetella uptake gene Alide_2980 IPR023606 CoA-transferase family III domain superfamily Alide_2980 IPR003673 CoA-transferase family III Alide_2981 IPR003673 CoA-transferase family III Alide_2981 IPR023606 CoA-transferase family III domain superfamily Alide_2982 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_2982 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_2982 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_2982 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_2982 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_2982 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_2983 IPR016790 Thiol ester hydratase, Rv0216, predicted Alide_2983 IPR002539 MaoC-like dehydratase domain Alide_2983 IPR029069 HotDog domain superfamily Alide_2984 IPR006475 Citrate lyase, beta subunit, bacteria Alide_2984 IPR011206 Citrate lyase beta subunit-like Alide_2984 IPR040442 Pyruvate kinase-like domain superfamily Alide_2984 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_2984 IPR005000 HpcH/HpaI aldolase/citrate lyase domain Alide_2985 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Alide_2985 IPR009057 Homeobox-like domain superfamily Alide_2985 IPR001647 DNA-binding HTH domain, TetR-type Alide_2985 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal Alide_2986 IPR004815 Lon protease, bacterial/eukaryotic-type Alide_2986 IPR008269 Peptidase S16, Lon proteolytic domain Alide_2986 IPR003959 ATPase, AAA-type, core Alide_2986 IPR003593 AAA+ ATPase domain Alide_2986 IPR027543 Lon protease, bacterial Alide_2986 IPR003111 Lon, substrate-binding domain Alide_2986 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_2986 IPR008268 Peptidase S16, active site Alide_2986 IPR015947 PUA-like superfamily Alide_2986 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Alide_2986 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2986 IPR027065 Lon protease Alide_2987 IPR019489 Clp ATPase, C-terminal Alide_2987 IPR003593 AAA+ ATPase domain Alide_2987 IPR010603 Zinc finger, ClpX C4-type Alide_2987 IPR003959 ATPase, AAA-type, core Alide_2987 IPR038366 Zinc finger, ClpX C4-type superfamily Alide_2987 IPR004487 Clp protease, ATP-binding subunit ClpX Alide_2987 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_2988 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Alide_2988 IPR029045 ClpP/crotonase-like domain superfamily Alide_2988 IPR001907 ATP-dependent Clp protease proteolytic subunit Alide_2989 IPR027304 Trigger factor/SurA domain superfamily Alide_2989 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Alide_2989 IPR008881 Trigger factor, ribosome-binding, bacterial Alide_2989 IPR005215 Trigger factor Alide_2989 IPR008880 Trigger factor, C-terminal Alide_2989 IPR037041 Trigger factor, C-terminal domain superfamily Alide_2989 IPR036611 Trigger factor ribosome-binding domain superfamily Alide_2990 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Alide_2990 IPR001036 Acriflavin resistance protein Alide_2990 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Alide_2991 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Alide_2991 IPR022824 Multidrug resistance protein MdtA Alide_2991 IPR006143 RND efflux pump, membrane fusion protein Alide_2993 IPR002060 Squalene/phytoene synthase Alide_2993 IPR019845 Squalene/phytoene synthase, conserved site Alide_2993 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head Alide_2993 IPR008949 Isoprenoid synthase domain superfamily Alide_2994 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Alide_2994 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Alide_2994 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Alide_2994 IPR003660 HAMP domain Alide_2994 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Alide_2994 IPR004090 Chemotaxis methyl-accepting receptor Alide_2995 IPR014105 Carotenoid/retinoid oxidoreductase Alide_2995 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_2995 IPR002937 Amine oxidase Alide_2995 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site Alide_2997 IPR023679 Uncharacterised protein family UPF0761, bacterial Alide_2997 IPR017039 Virulence factor BrkB Alide_2999 IPR004113 FAD-linked oxidase, C-terminal Alide_2999 IPR016166 FAD-binding domain, PCMH-type Alide_2999 IPR036318 FAD-binding, type PCMH-like superfamily Alide_2999 IPR016164 FAD-linked oxidase-like, C-terminal Alide_2999 IPR004490 Glycolate oxidase subunit GlcD Alide_2999 IPR006094 FAD linked oxidase, N-terminal Alide_2999 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Alide_3000 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily Alide_3000 IPR000398 Thymidylate synthase Alide_3000 IPR020940 Thymidylate synthase, active site Alide_3000 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain Alide_3001 IPR001796 Dihydrofolate reductase domain Alide_3001 IPR012259 Dihydrofolate reductase Alide_3001 IPR017925 Dihydrofolate reductase conserved site Alide_3001 IPR024072 Dihydrofolate reductase-like domain superfamily Alide_3003 IPR036737 OmpA-like domain superfamily Alide_3003 IPR006665 OmpA-like domain Alide_3003 IPR025713 Motility protein B, N-terminal domain Alide_3007 IPR025161 Putative transposase IS4/IS5 family Alide_3008 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_3008 IPR001789 Signal transduction response regulator, receiver domain Alide_3008 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3008 IPR039420 Transcriptional regulatory protein WalR-like Alide_3008 IPR011006 CheY-like superfamily Alide_3009 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_3009 IPR003018 GAF domain Alide_3009 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_3009 IPR029016 GAF-like domain superfamily Alide_3009 IPR003594 Histidine kinase/HSP90-like ATPase Alide_3009 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_3009 IPR005467 Histidine kinase domain Alide_3009 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_3009 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal Alide_3009 IPR025201 Sensor protein KdpD, transmembrane domain Alide_3009 IPR038318 KdpD, transmembrane domain superfamily Alide_3010 IPR003820 Potassium-transporting ATPase C chain Alide_3011 IPR023298 P-type ATPase, transmembrane domain superfamily Alide_3011 IPR018303 P-type ATPase, phosphorylation site Alide_3011 IPR023299 P-type ATPase, cytoplasmic domain N Alide_3011 IPR008250 P-type ATPase, A domain superfamily Alide_3011 IPR001757 P-type ATPase Alide_3011 IPR006391 P-type ATPase, B chain, subfamily IA Alide_3011 IPR036412 HAD-like superfamily Alide_3012 IPR023298 P-type ATPase, transmembrane domain superfamily Alide_3012 IPR004623 Potassium-transporting ATPase A chain Alide_3014 IPR005135 Endonuclease/exonuclease/phosphatase Alide_3014 IPR020848 AP endonuclease 1, conserved site Alide_3014 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Alide_3014 IPR037493 Exodeoxyribonuclease III-like Alide_3014 IPR020847 AP endonuclease 1, binding site Alide_3014 IPR004808 AP endonuclease 1 Alide_3015 IPR011006 CheY-like superfamily Alide_3015 IPR009057 Homeobox-like domain superfamily Alide_3015 IPR002197 DNA binding HTH domain, Fis-type Alide_3015 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3015 IPR002078 RNA polymerase sigma factor 54 interaction domain Alide_3015 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Alide_3015 IPR025944 Sigma-54 interaction domain, conserved site Alide_3015 IPR010114 DNA-binding transcriptional regulator NtrC Alide_3015 IPR001789 Signal transduction response regulator, receiver domain Alide_3015 IPR003593 AAA+ ATPase domain Alide_3015 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Alide_3016 IPR013767 PAS fold Alide_3016 IPR005467 Histidine kinase domain Alide_3016 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_3016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_3016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_3016 IPR000014 PAS domain Alide_3016 IPR035965 PAS domain superfamily Alide_3016 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_3016 IPR003594 Histidine kinase/HSP90-like ATPase Alide_3024 IPR006145 Pseudouridine synthase, RsuA/RluA Alide_3024 IPR020103 Pseudouridine synthase, catalytic domain superfamily Alide_3024 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain Alide_3024 IPR036986 RNA-binding S4 domain superfamily Alide_3024 IPR002942 RNA-binding S4 domain Alide_3024 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Alide_3024 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Alide_3026 IPR018220 Adenylosuccinate synthase, GTP-binding site Alide_3026 IPR042110 Adenylosuccinate synthetase, domain 2 Alide_3026 IPR042111 Adenylosuccinate synthetase, domain 3 Alide_3026 IPR033128 Adenylosuccinate synthase, active site Alide_3026 IPR001114 Adenylosuccinate synthetase Alide_3026 IPR042109 Adenylosuccinate synthetase, domain 1 Alide_3026 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3027 IPR004517 ATP phosphoribosyltransferase regulatory subunit Alide_3027 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain Alide_3027 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Alide_3029 IPR001107 Band 7 domain Alide_3029 IPR036013 Band 7/SPFH domain superfamily Alide_3029 IPR010200 HflC Alide_3030 IPR020980 Menbrane protein HflK, N-terminal Alide_3030 IPR001107 Band 7 domain Alide_3030 IPR010201 HflK Alide_3030 IPR036013 Band 7/SPFH domain superfamily Alide_3030 IPR001972 Stomatin family Alide_3031 IPR032305 GTP-binding protein, middle domain Alide_3031 IPR016496 GTPase HflX Alide_3031 IPR030394 HflX-type guanine nucleotide-binding (G) domain Alide_3031 IPR035647 EF-G domain III/V-like Alide_3031 IPR025121 GTPase HflX, N-terminal Alide_3031 IPR042108 GTPase HflX, N-terminal domain superfamily Alide_3031 IPR006073 GTP binding domain Alide_3031 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3032 IPR010920 LSM domain superfamily Alide_3032 IPR005001 RNA-binding protein Hfq Alide_3033 IPR031166 EngA-type guanine nucleotide-binding (G) domain Alide_3033 IPR005225 Small GTP-binding protein domain Alide_3033 IPR032859 GTPase Der, C-terminal KH-domain-like Alide_3033 IPR006073 GTP binding domain Alide_3033 IPR015946 K homology domain-like, alpha/beta Alide_3033 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3033 IPR016484 GTP-binding protein EngA Alide_3034 IPR017687 Outer membrane protein assembly factor BamB Alide_3034 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Alide_3034 IPR002372 Pyrrolo-quinoline quinone repeat Alide_3034 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Alide_3034 IPR015943 WD40/YVTN repeat-like-containing domain superfamily Alide_3036 IPR015807 Histidine-tRNA ligase Alide_3036 IPR036621 Anticodon-binding domain superfamily Alide_3036 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Alide_3036 IPR004154 Anticodon-binding Alide_3036 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain Alide_3036 IPR006195 Aminoacyl-tRNA synthetase, class II Alide_3037 IPR011005 Dihydropteroate synthase-like Alide_3037 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type Alide_3037 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial Alide_3040 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr Alide_3040 IPR027492 Dual-specificity RNA methyltransferase RlmN Alide_3040 IPR007197 Radical SAM Alide_3040 IPR013785 Aldolase-type TIM barrel Alide_3040 IPR040072 Methyltransferase (Class A) Alide_3041 IPR036850 Nucleoside diphosphate kinase-like domain superfamily Alide_3041 IPR001564 Nucleoside diphosphate kinase Alide_3041 IPR034907 Nucleoside diphosphate kinase-like domain Alide_3042 IPR036986 RNA-binding S4 domain superfamily Alide_3042 IPR002942 RNA-binding S4 domain Alide_3042 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Alide_3042 IPR020103 Pseudouridine synthase, catalytic domain superfamily Alide_3042 IPR006145 Pseudouridine synthase, RsuA/RluA Alide_3042 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Alide_3043 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3043 IPR005234 Chromosome segregation/condensation protein ScpB Alide_3043 IPR036390 Winged helix DNA-binding domain superfamily Alide_3044 IPR002942 RNA-binding S4 domain Alide_3044 IPR006225 Pseudouridine synthase, RluC/RluD Alide_3044 IPR006145 Pseudouridine synthase, RsuA/RluA Alide_3044 IPR036986 RNA-binding S4 domain superfamily Alide_3044 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Alide_3044 IPR020103 Pseudouridine synthase, catalytic domain superfamily Alide_3045 IPR036779 LysM domain superfamily Alide_3045 IPR011055 Duplicated hybrid motif Alide_3045 IPR018392 LysM domain Alide_3045 IPR016047 Peptidase M23 Alide_3046 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase Alide_3046 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_3047 IPR030048 Survival protein SurE Alide_3047 IPR036523 SurE-like phosphatase/nucleotidase superfamily Alide_3047 IPR002828 Survival protein SurE-like phosphatase/nucleotidase Alide_3048 IPR011006 CheY-like superfamily Alide_3048 IPR000160 GGDEF domain Alide_3048 IPR029787 Nucleotide cyclase Alide_3048 IPR001789 Signal transduction response regulator, receiver domain Alide_3049 IPR008963 Purple acid phosphatase-like, N-terminal Alide_3049 IPR032093 Phospholipase D, N-terminal Alide_3049 IPR018946 Alkaline phosphatase D-related Alide_3049 IPR038607 PhoD-like superfamily Alide_3051 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site Alide_3051 IPR013785 Aldolase-type TIM barrel Alide_3051 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent Alide_3051 IPR000262 FMN-dependent dehydrogenase Alide_3051 IPR037396 FMN hydroxy acid dehydrogenase domain Alide_3052 IPR042100 Bordetella uptake gene, domain 1 Alide_3052 IPR005064 Bordetella uptake gene Alide_3055 IPR011234 Fumarylacetoacetase-like, C-terminal Alide_3055 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily Alide_3057 IPR000432 DNA mismatch repair protein MutS, C-terminal Alide_3057 IPR007861 DNA mismatch repair protein MutS, clamp Alide_3057 IPR036678 MutS, connector domain superfamily Alide_3057 IPR017261 DNA mismatch repair protein MutS/MSH Alide_3057 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Alide_3057 IPR016151 DNA mismatch repair protein MutS, N-terminal Alide_3057 IPR007696 DNA mismatch repair protein MutS, core Alide_3057 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3057 IPR005748 DNA mismatch repair protein MutS Alide_3057 IPR007860 DNA mismatch repair protein MutS, connector domain Alide_3057 IPR007695 DNA mismatch repair protein MutS-like, N-terminal Alide_3058 IPR003423 Outer membrane efflux protein Alide_3058 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Alide_3059 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Alide_3059 IPR001036 Acriflavin resistance protein Alide_3059 IPR023931 Multidrug resistance protein MdtC Alide_3060 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Alide_3060 IPR022831 Multidrug resistance protein MdtB Alide_3060 IPR001036 Acriflavin resistance protein Alide_3061 IPR006143 RND efflux pump, membrane fusion protein Alide_3061 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Alide_3061 IPR022824 Multidrug resistance protein MdtA Alide_3063 IPR003824 Undecaprenyl-diphosphatase UppP Alide_3066 IPR003594 Histidine kinase/HSP90-like ATPase Alide_3066 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_3066 IPR010559 Signal transduction histidine kinase, internal region Alide_3067 IPR001789 Signal transduction response regulator, receiver domain Alide_3067 IPR011006 CheY-like superfamily Alide_3067 IPR007492 LytTR DNA-binding domain Alide_3068 IPR011701 Major facilitator superfamily Alide_3068 IPR020846 Major facilitator superfamily domain Alide_3068 IPR036259 MFS transporter superfamily Alide_3070 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_3070 IPR002938 FAD-binding domain Alide_3071 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Alide_3071 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Alide_3071 IPR006249 Aconitase/Iron-responsive element-binding protein 2 Alide_3071 IPR018136 Aconitase family, 4Fe-4S cluster binding site Alide_3071 IPR036008 Aconitase, iron-sulfur domain Alide_3071 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain Alide_3071 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain Alide_3072 IPR001801 Histone-like protein H-NS Alide_3072 IPR027444 Histone-like protein H-NS, C-terminal domain Alide_3073 IPR029052 Metallo-dependent phosphatase-like Alide_3073 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Alide_3073 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) Alide_3075 IPR002323 Cytochrome c, class IE Alide_3075 IPR009056 Cytochrome c-like domain Alide_3075 IPR036909 Cytochrome c-like domain superfamily Alide_3077 IPR002429 Cytochrome c oxidase subunit II-like C-terminal Alide_3077 IPR015943 WD40/YVTN repeat-like-containing domain superfamily Alide_3077 IPR028096 EfeO-type cupredoxin-like domain Alide_3077 IPR008972 Cupredoxin Alide_3077 IPR011045 Nitrous oxide reductase, N-terminal Alide_3077 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_3077 IPR041142 Nitrous oxide reductase, propeller repeat 2 Alide_3077 IPR034205 Nitrous-oxide reductase, C-terminal Alide_3077 IPR041114 Nitrous oxide reductase, propeller repeat 1 Alide_3077 IPR023644 Nitrous-oxide reductase Alide_3078 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_3078 IPR007329 FMN-binding Alide_3078 IPR011399 Nitrous oxide reductase expression regulator NosR Alide_3079 IPR011050 Pectin lyase fold/virulence factor Alide_3079 IPR006626 Parallel beta-helix repeat Alide_3079 IPR022441 Parallel beta-helix repeat-2 Alide_3079 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Alide_3079 IPR026464 Nitrous oxide reductase family maturation protein NosD Alide_3079 IPR006633 Carbohydrate-binding/sugar hydrolysis domain Alide_3079 IPR012334 Pectin lyase fold Alide_3080 IPR017871 ABC transporter, conserved site Alide_3080 IPR003593 AAA+ ATPase domain Alide_3080 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3080 IPR003439 ABC transporter-like Alide_3081 IPR032688 ABC-2 family transporter protein Alide_3084 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Alide_3084 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3084 IPR014001 Helicase superfamily 1/2, ATP-binding domain Alide_3084 IPR028622 ATP-dependent RNA helicase RhlE Alide_3084 IPR011545 DEAD/DEAH box helicase domain Alide_3084 IPR014014 RNA helicase, DEAD-box type, Q motif Alide_3084 IPR001650 Helicase, C-terminal Alide_3085 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative Alide_3086 IPR033704 dUTPase, trimeric Alide_3086 IPR036157 dUTPase-like superfamily Alide_3086 IPR029054 dUTPase-like Alide_3086 IPR011962 dCTP deaminase Alide_3090 IPR023419 Transthyretin, conserved site Alide_3090 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Alide_3090 IPR000895 Transthyretin/hydroxyisourate hydrolase Alide_3090 IPR014306 Hydroxyisourate hydrolase Alide_3090 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Alide_3090 IPR023418 Transthyretin, thyroxine binding site Alide_3091 IPR029055 Nucleophile aminohydrolases, N-terminal Alide_3091 IPR000101 Gamma-glutamyltranspeptidase Alide_3094 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Alide_3094 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site Alide_3094 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Alide_3094 IPR036291 NAD(P)-binding domain superfamily Alide_3094 IPR006398 2-hydroxy-3-oxopropionate reductase Alide_3094 IPR015815 3-hydroxyisobutyrate dehydrogenase-related Alide_3094 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Alide_3094 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_3095 IPR026040 Hydroxypyruvate isomerase-like Alide_3095 IPR036237 Xylose isomerase-like superfamily Alide_3095 IPR013022 Xylose isomerase-like, TIM barrel domain Alide_3095 IPR017643 Hydroxypyruvate isomerase Alide_3096 IPR029035 DHS-like NAD/FAD-binding domain superfamily Alide_3096 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Alide_3096 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Alide_3096 IPR012000 Thiamine pyrophosphate enzyme, central domain Alide_3096 IPR006397 Glyoxylate carboligase Alide_3096 IPR029061 Thiamin diphosphate-binding fold Alide_3097 IPR005119 LysR, substrate-binding Alide_3097 IPR000847 Transcription regulator HTH, LysR Alide_3097 IPR036390 Winged helix DNA-binding domain superfamily Alide_3097 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3098 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Alide_3099 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_3099 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_3099 IPR015424 Pyridoxal phosphate-dependent transferase Alide_3099 IPR005814 Aminotransferase class-III Alide_3101 IPR038614 Glycerate kinase, N-terminal domain superfamily Alide_3101 IPR007835 MOFRL domain Alide_3101 IPR039760 MOFRL domain-containing protein Alide_3101 IPR025286 MOFRL-associated domain Alide_3101 IPR037035 Glycerate kinase-like, C-terminal domain superfamily Alide_3102 IPR042100 Bordetella uptake gene, domain 1 Alide_3102 IPR005064 Bordetella uptake gene Alide_3103 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site Alide_3103 IPR011829 Tartrate dehydrogenase Alide_3103 IPR024084 Isopropylmalate dehydrogenase-like domain Alide_3104 IPR000847 Transcription regulator HTH, LysR Alide_3104 IPR005119 LysR, substrate-binding Alide_3104 IPR036390 Winged helix DNA-binding domain superfamily Alide_3104 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3105 IPR011711 GntR, C-terminal Alide_3105 IPR036390 Winged helix DNA-binding domain superfamily Alide_3105 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3105 IPR000524 Transcription regulator HTH, GntR Alide_3105 IPR008920 Transcription regulator FadR/GntR, C-terminal Alide_3107 IPR011650 Peptidase M20, dimerisation domain Alide_3107 IPR002933 Peptidase M20 Alide_3107 IPR010158 Amidase, carbamoylase-type Alide_3107 IPR036264 Bacterial exopeptidase dimerisation domain Alide_3108 IPR002933 Peptidase M20 Alide_3108 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria Alide_3108 IPR036264 Bacterial exopeptidase dimerisation domain Alide_3108 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site Alide_3108 IPR011650 Peptidase M20, dimerisation domain Alide_3110 IPR004090 Chemotaxis methyl-accepting receptor Alide_3110 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Alide_3110 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Alide_3110 IPR003660 HAMP domain Alide_3110 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Alide_3110 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Alide_3111 IPR006042 Xanthine/uracil permease Alide_3111 IPR017588 Uric acid permease UacT-like Alide_3111 IPR006043 Xanthine/uracil/vitamin C permease Alide_3112 IPR015884 Malic enzyme, conserved site Alide_3112 IPR012301 Malic enzyme, N-terminal domain Alide_3112 IPR012302 Malic enzyme, NAD-binding Alide_3112 IPR036291 NAD(P)-binding domain superfamily Alide_3112 IPR042113 Phosphate acetyltransferase, domain 1 Alide_3112 IPR002505 Phosphate acetyl/butaryl transferase Alide_3112 IPR042112 Phosphate acetyltransferase, domain 2 Alide_3112 IPR012188 NAD(P)-dependent malic enzyme Alide_3112 IPR037062 Malic enzyme, N-terminal domain superfamily Alide_3113 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Alide_3117 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Alide_3117 IPR036249 Thioredoxin-like superfamily Alide_3117 IPR013766 Thioredoxin domain Alide_3118 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3118 IPR003714 PhoH-like protein Alide_3118 IPR029060 PIN-like domain superfamily Alide_3118 IPR002716 PIN domain Alide_3119 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent Alide_3119 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_3119 IPR016160 Aldehyde dehydrogenase, cysteine active site Alide_3119 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_3119 IPR015590 Aldehyde dehydrogenase domain Alide_3119 IPR010102 Succinate semialdehyde dehydrogenase Alide_3119 IPR016161 Aldehyde/histidinol dehydrogenase Alide_3120 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily Alide_3120 IPR007692 DNA helicase, DnaB type Alide_3120 IPR007693 DNA helicase, DnaB-like, N-terminal Alide_3120 IPR003593 AAA+ ATPase domain Alide_3120 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Alide_3120 IPR007694 DNA helicase, DnaB-like, C-terminal Alide_3120 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3121 IPR020594 Ribosomal protein L9, bacteria/chloroplast Alide_3121 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Alide_3121 IPR020070 Ribosomal protein L9, N-terminal Alide_3121 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Alide_3121 IPR020069 Ribosomal protein L9, C-terminal Alide_3121 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Alide_3121 IPR000244 Ribosomal protein L9 Alide_3122 IPR001648 Ribosomal protein S18 Alide_3122 IPR036870 Ribosomal protein S18 superfamily Alide_3123 IPR000424 Primosome PriB/single-strand DNA-binding Alide_3123 IPR012340 Nucleic acid-binding, OB-fold Alide_3123 IPR023646 Primosomal replication protein PriB Alide_3124 IPR020815 Ribosomal protein S6, conserved site Alide_3124 IPR020814 Ribosomal protein S6, plastid/chloroplast Alide_3124 IPR035980 Ribosomal protein S6 superfamily Alide_3124 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Alide_3124 IPR000529 Ribosomal protein S6 Alide_3125 IPR013805 GrpE nucleotide exchange factor, coiled-coil Alide_3125 IPR009012 GrpE nucleotide exchange factor, head Alide_3125 IPR000740 GrpE nucleotide exchange factor Alide_3126 IPR013126 Heat shock protein 70 family Alide_3126 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Alide_3126 IPR012725 Chaperone DnaK Alide_3126 IPR018181 Heat shock protein 70, conserved site Alide_3126 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Alide_3127 IPR008971 HSP40/DnaJ peptide-binding Alide_3127 IPR012724 Chaperone DnaJ Alide_3127 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Alide_3127 IPR036869 Chaperone J-domain superfamily Alide_3127 IPR018253 DnaJ domain, conserved site Alide_3127 IPR001305 Heat shock protein DnaJ, cysteine-rich domain Alide_3127 IPR001623 DnaJ domain Alide_3127 IPR002939 Chaperone DnaJ, C-terminal Alide_3129 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_3129 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_3129 IPR015424 Pyridoxal phosphate-dependent transferase Alide_3129 IPR011166 Beta-eliminating lyase family Alide_3129 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase Alide_3129 IPR013440 Tryptophanase Alide_3134 IPR036551 Flavin prenyltransferase-like Alide_3134 IPR004507 Flavin prenyltransferase UbiX-like Alide_3134 IPR003382 Flavoprotein Alide_3135 IPR002830 UbiD decarboxylyase family Alide_3135 IPR023677 UbiD decarboxylyase, bacteria Alide_3136 IPR017972 Cytochrome P450, conserved site Alide_3136 IPR001128 Cytochrome P450 Alide_3136 IPR002397 Cytochrome P450, B-class Alide_3136 IPR036396 Cytochrome P450 superfamily Alide_3137 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Alide_3137 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Alide_3137 IPR001279 Metallo-beta-lactamase Alide_3137 IPR022712 Beta-Casp domain Alide_3139 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain Alide_3139 IPR018136 Aconitase family, 4Fe-4S cluster binding site Alide_3139 IPR036008 Aconitase, iron-sulfur domain Alide_3139 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Alide_3139 IPR033941 3-Isopropylmalate dehydratase, catalytic domain Alide_3139 IPR004430 3-isopropylmalate dehydratase, large subunit Alide_3140 IPR012556 Entericidin A/B Alide_3141 IPR033940 3-isopropylmalate dehydratase, swivel domain Alide_3141 IPR004431 3-isopropylmalate dehydratase, small subunit Alide_3141 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain Alide_3141 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Alide_3142 IPR024084 Isopropylmalate dehydrogenase-like domain Alide_3142 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site Alide_3142 IPR004429 Isopropylmalate dehydrogenase Alide_3143 IPR000534 Semialdehyde dehydrogenase, NAD-binding Alide_3143 IPR036291 NAD(P)-binding domain superfamily Alide_3143 IPR012080 Aspartate-semialdehyde dehydrogenase Alide_3143 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site Alide_3143 IPR012280 Semialdehyde dehydrogenase, dimerisation domain Alide_3143 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type Alide_3145 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain Alide_3145 IPR020103 Pseudouridine synthase, catalytic domain superfamily Alide_3145 IPR020095 Pseudouridine synthase I, TruA, C-terminal Alide_3145 IPR001406 Pseudouridine synthase I, TruA Alide_3146 IPR011060 Ribulose-phosphate binding barrel Alide_3146 IPR013785 Aldolase-type TIM barrel Alide_3146 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) Alide_3147 IPR006654 Tryptophan synthase, beta chain Alide_3147 IPR001926 Pyridoxal-phosphate dependent enzyme Alide_3147 IPR006653 Tryptophan synthase, beta chain, conserved site Alide_3147 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Alide_3147 IPR023026 Tryptophan synthase beta chain/beta chain-like Alide_3148 IPR018204 Tryptophan synthase, alpha chain, active site Alide_3148 IPR002028 Tryptophan synthase, alpha chain Alide_3148 IPR013785 Aldolase-type TIM barrel Alide_3148 IPR011060 Ribulose-phosphate binding barrel Alide_3149 IPR034733 Acetyl-CoA carboxylase Alide_3149 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit Alide_3149 IPR029045 ClpP/crotonase-like domain superfamily Alide_3149 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal Alide_3149 IPR041010 Acetyl-coA carboxylase zinc finger domain Alide_3150 IPR003425 CCB3/YggT Alide_3152 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Alide_3152 IPR036291 NAD(P)-binding domain superfamily Alide_3152 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_3154 IPR011004 Trimeric LpxA-like superfamily Alide_3154 IPR001451 Hexapeptide repeat Alide_3155 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Alide_3157 IPR027555 tRNA (mo5U34)-methyltransferase-like Alide_3157 IPR010017 tRNA U34 carboxymethyltransferase Alide_3157 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_3158 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_3158 IPR015424 Pyridoxal phosphate-dependent transferase Alide_3158 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_3158 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Alide_3159 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Alide_3159 IPR003362 Bacterial sugar transferase Alide_3160 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Alide_3160 IPR002313 Lysine-tRNA ligase, class II Alide_3160 IPR006195 Aminoacyl-tRNA synthetase, class II Alide_3160 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Alide_3160 IPR012340 Nucleic acid-binding, OB-fold Alide_3160 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal Alide_3162 IPR028081 Leucine-binding protein domain Alide_3162 IPR000709 Leu/Ile/Val-binding protein Alide_3162 IPR028082 Periplasmic binding protein-like I Alide_3163 IPR001851 ABC transporter, permease Alide_3164 IPR001851 ABC transporter, permease Alide_3164 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal Alide_3165 IPR017871 ABC transporter, conserved site Alide_3165 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Alide_3165 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3165 IPR003593 AAA+ ATPase domain Alide_3165 IPR003439 ABC transporter-like Alide_3166 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3166 IPR017871 ABC transporter, conserved site Alide_3166 IPR003439 ABC transporter-like Alide_3166 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_3166 IPR003593 AAA+ ATPase domain Alide_3167 IPR012829 Phosphofructokinase, mixed-substrate PFK group III Alide_3167 IPR000023 Phosphofructokinase domain Alide_3167 IPR015912 Phosphofructokinase, conserved site Alide_3167 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type Alide_3167 IPR022953 ATP-dependent 6-phosphofructokinase Alide_3167 IPR035966 Phosphofructokinase superfamily Alide_3168 IPR017853 Glycoside hydrolase superfamily Alide_3168 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily Alide_3168 IPR001764 Glycoside hydrolase, family 3, N-terminal Alide_3168 IPR019800 Glycoside hydrolase, family 3, active site Alide_3168 IPR022956 Beta-hexosaminidase, bacterial Alide_3169 IPR002582 Holo-[acyl carrier protein] synthase Alide_3169 IPR008278 4'-phosphopantetheinyl transferase domain Alide_3169 IPR004568 Phosphopantetheine-protein transferase domain Alide_3169 IPR037143 4'-phosphopantetheinyl transferase domain superfamily Alide_3170 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ Alide_3170 IPR013785 Aldolase-type TIM barrel Alide_3170 IPR036130 Pyridoxine 5'-phosphate synthase Alide_3171 IPR022572 DNA replication/recombination mediator RecO, N-terminal Alide_3171 IPR037278 ARFGAP/RecO-like zinc finger Alide_3171 IPR003717 Recombination protein O, RecO Alide_3171 IPR012340 Nucleic acid-binding, OB-fold Alide_3172 IPR005662 GTP-binding protein Era Alide_3172 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3172 IPR005225 Small GTP-binding protein domain Alide_3172 IPR004044 K Homology domain, type 2 Alide_3172 IPR009019 K homology domain superfamily, prokaryotic type Alide_3172 IPR006073 GTP binding domain Alide_3172 IPR030388 Era-type guanine nucleotide-binding (G) domain Alide_3172 IPR015946 K homology domain-like, alpha/beta Alide_3173 IPR011907 Ribonuclease III Alide_3173 IPR000999 Ribonuclease III domain Alide_3173 IPR036389 Ribonuclease III, endonuclease domain superfamily Alide_3173 IPR014720 Double-stranded RNA-binding domain Alide_3175 IPR019758 Peptidase S26A, signal peptidase I, conserved site Alide_3175 IPR019533 Peptidase S26 Alide_3175 IPR000223 Peptidase S26A, signal peptidase I Alide_3175 IPR036286 LexA/Signal peptidase-like superfamily Alide_3175 IPR019757 Peptidase S26A, signal peptidase I, lysine active site Alide_3175 IPR019756 Peptidase S26A, signal peptidase I, serine active site Alide_3176 IPR035654 Elongation factor 4, domain IV Alide_3176 IPR000795 Transcription factor, GTP-binding domain Alide_3176 IPR004161 Translation elongation factor EFTu-like, domain 2 Alide_3176 IPR005225 Small GTP-binding protein domain Alide_3176 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3176 IPR009000 Translation protein, beta-barrel domain superfamily Alide_3176 IPR006297 Elongation factor 4 Alide_3176 IPR013842 GTP-binding protein LepA, C-terminal Alide_3176 IPR035647 EF-G domain III/V-like Alide_3176 IPR000640 Elongation factor EFG, domain V-like Alide_3176 IPR031157 Tr-type G domain, conserved site Alide_3176 IPR038363 LepA, C-terminal domain superfamily Alide_3177 IPR011782 Peptidase S1C, Do Alide_3177 IPR036034 PDZ superfamily Alide_3177 IPR001478 PDZ domain Alide_3177 IPR009003 Peptidase S1, PA clan Alide_3177 IPR001940 Peptidase S1C Alide_3180 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3180 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Alide_3180 IPR013325 RNA polymerase sigma factor, region 2 Alide_3180 IPR007627 RNA polymerase sigma-70 region 2 Alide_3180 IPR014284 RNA polymerase sigma-70 like domain Alide_3180 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Alide_3180 IPR013324 RNA polymerase sigma factor, region 3/4-like Alide_3180 IPR039425 RNA polymerase sigma-70 like Alide_3180 IPR014286 RNA polymerase sigma-70 RpoE type Alide_3182 IPR014031 Beta-ketoacyl synthase, C-terminal Alide_3182 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 Alide_3182 IPR000794 Beta-ketoacyl synthase Alide_3182 IPR018201 Beta-ketoacyl synthase, active site Alide_3182 IPR014030 Beta-ketoacyl synthase, N-terminal Alide_3182 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Alide_3182 IPR016039 Thiolase-like Alide_3183 IPR009081 Phosphopantetheine binding ACP domain Alide_3183 IPR006162 Phosphopantetheine attachment site Alide_3183 IPR003231 Acyl carrier protein (ACP) Alide_3183 IPR036736 ACP-like superfamily Alide_3183 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Alide_3184 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_3184 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Alide_3184 IPR036291 NAD(P)-binding domain superfamily Alide_3184 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_3185 IPR014043 Acyl transferase Alide_3185 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Alide_3185 IPR024925 Malonyl CoA-acyl carrier protein transacylase Alide_3185 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type Alide_3185 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Alide_3185 IPR001227 Acyl transferase domain superfamily Alide_3186 IPR016039 Thiolase-like Alide_3186 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal Alide_3186 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 Alide_3186 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Alide_3187 IPR012281 Phospholipid biosynthesis protein, PlsX-like Alide_3187 IPR003664 Fatty acid synthesis PlsX protein Alide_3188 IPR002677 Ribosomal protein L32p Alide_3188 IPR011332 Zinc-binding ribosomal protein Alide_3189 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria Alide_3189 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Alide_3190 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein Alide_3190 IPR029001 Inosine triphosphate pyrophosphatase-like Alide_3191 IPR035996 Tetrapyrrole methylase superfamily Alide_3191 IPR000878 Tetrapyrrole methylase Alide_3191 IPR014776 Tetrapyrrole methylase, subdomain 2 Alide_3191 IPR008189 rRNA small subunit methyltransferase I Alide_3191 IPR018063 SAM-dependent methyltransferase RsmI, conserved site Alide_3191 IPR014777 Tetrapyrrole methylase, subdomain 1 Alide_3192 IPR029045 ClpP/crotonase-like domain superfamily Alide_3192 IPR023171 Na/H antiporter domain superfamily Alide_3192 IPR002142 Peptidase S49 Alide_3192 IPR004670 Na+/H+ antiporter NhaA Alide_3194 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Alide_3194 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic Alide_3194 IPR006439 HAD hydrolase, subfamily IA Alide_3194 IPR036412 HAD-like superfamily Alide_3194 IPR023214 HAD superfamily Alide_3194 IPR041492 Haloacid dehalogenase-like hydrolase Alide_3195 IPR006225 Pseudouridine synthase, RluC/RluD Alide_3195 IPR036986 RNA-binding S4 domain superfamily Alide_3195 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Alide_3195 IPR002942 RNA-binding S4 domain Alide_3195 IPR006145 Pseudouridine synthase, RsuA/RluA Alide_3195 IPR020103 Pseudouridine synthase, catalytic domain superfamily Alide_3196 IPR028878 Ribonuclease E Alide_3196 IPR003029 S1 domain Alide_3196 IPR022967 RNA-binding domain, S1 Alide_3196 IPR021968 Polyribonucleotide phosphorylase C-terminal Alide_3196 IPR012340 Nucleic acid-binding, OB-fold Alide_3196 IPR004659 Ribonuclease E/G Alide_3196 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G Alide_3197 IPR005583 Peroxide stress protein YaaA Alide_3199 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF Alide_3199 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal Alide_3199 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 Alide_3200 IPR013655 PAS fold-3 Alide_3200 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Alide_3200 IPR001610 PAC motif Alide_3200 IPR003660 HAMP domain Alide_3200 IPR004090 Chemotaxis methyl-accepting receptor Alide_3200 IPR035965 PAS domain superfamily Alide_3200 IPR000014 PAS domain Alide_3201 IPR036775 DNA polymerase, Y-family, little finger domain superfamily Alide_3201 IPR022880 DNA polymerase IV Alide_3201 IPR017961 DNA polymerase, Y-family, little finger domain Alide_3201 IPR001126 UmuC domain Alide_3202 IPR036390 Winged helix DNA-binding domain superfamily Alide_3202 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3202 IPR000847 Transcription regulator HTH, LysR Alide_3202 IPR005119 LysR, substrate-binding Alide_3202 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain Alide_3203 IPR042100 Bordetella uptake gene, domain 1 Alide_3203 IPR005064 Bordetella uptake gene Alide_3204 IPR003673 CoA-transferase family III Alide_3204 IPR023606 CoA-transferase family III domain superfamily Alide_3205 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3205 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3205 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3205 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3205 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3205 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3205 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_3207 IPR020920 L-lactate dehydrogenase, bacterial Alide_3207 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent Alide_3207 IPR013785 Aldolase-type TIM barrel Alide_3207 IPR000262 FMN-dependent dehydrogenase Alide_3207 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site Alide_3207 IPR037396 FMN hydroxy acid dehydrogenase domain Alide_3208 IPR006664 Outer membrane protein, bacterial Alide_3208 IPR006665 OmpA-like domain Alide_3208 IPR036737 OmpA-like domain superfamily Alide_3209 IPR029787 Nucleotide cyclase Alide_3209 IPR001633 EAL domain Alide_3209 IPR035919 EAL domain superfamily Alide_3209 IPR000160 GGDEF domain Alide_3209 IPR035965 PAS domain superfamily Alide_3209 IPR000014 PAS domain Alide_3209 IPR005330 MHYT domain Alide_3210 IPR025293 YfiR/HmsC-like Alide_3211 IPR028166 Bifunctional transglycosylase second domain Alide_3211 IPR023346 Lysozyme-like domain superfamily Alide_3211 IPR036950 Penicillin binding protein transglycosylase domain Alide_3211 IPR011813 Penicillin-binding protein 1B Alide_3211 IPR001264 Glycosyl transferase, family 51 Alide_3211 IPR012338 Beta-lactamase/transpeptidase-like Alide_3211 IPR001460 Penicillin-binding protein, transpeptidase Alide_3212 IPR004363 Methylglyoxal synthase Alide_3212 IPR011607 Methylglyoxal synthase-like domain Alide_3212 IPR036914 Methylglyoxal synthase-like domain superfamily Alide_3213 IPR026347 Mesaconyl-CoA isomerase Alide_3213 IPR003673 CoA-transferase family III Alide_3213 IPR023606 CoA-transferase family III domain superfamily Alide_3214 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3214 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3214 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_3214 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3214 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3214 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3214 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3216 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3216 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3216 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3216 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3216 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3216 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_3216 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3217 IPR027473 L-asparaginase, C-terminal Alide_3217 IPR040919 Asparaginase/glutaminase, C-terminal Alide_3217 IPR027475 Asparaginase/glutaminase, active site 2 Alide_3217 IPR020827 Asparaginase/glutaminase, active site 1 Alide_3217 IPR006034 Asparaginase/glutaminase-like Alide_3217 IPR036152 Asparaginase/glutaminase-like superfamily Alide_3217 IPR004550 L-asparaginase, type II Alide_3217 IPR037152 L-asparaginase, N-terminal domain superfamily Alide_3217 IPR027474 L-asparaginase, N-terminal Alide_3218 IPR005064 Bordetella uptake gene Alide_3218 IPR042100 Bordetella uptake gene, domain 1 Alide_3219 IPR005119 LysR, substrate-binding Alide_3219 IPR000847 Transcription regulator HTH, LysR Alide_3219 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3219 IPR036390 Winged helix DNA-binding domain superfamily Alide_3220 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE Alide_3220 IPR041780 PrpE-like, metallophosphatase domain Alide_3220 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase Alide_3220 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Alide_3220 IPR029052 Metallo-dependent phosphatase-like Alide_3222 IPR005064 Bordetella uptake gene Alide_3222 IPR042100 Bordetella uptake gene, domain 1 Alide_3223 IPR008948 L-Aspartase-like Alide_3223 IPR009049 Argininosuccinate lyase Alide_3223 IPR029419 Argininosuccinate lyase, C-terminal Alide_3223 IPR000362 Fumarate lyase family Alide_3223 IPR020557 Fumarate lyase, conserved site Alide_3223 IPR024083 Fumarase/histidase, N-terminal Alide_3223 IPR022761 Fumarate lyase, N-terminal Alide_3224 IPR003018 GAF domain Alide_3224 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region Alide_3224 IPR010559 Signal transduction histidine kinase, internal region Alide_3224 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_3225 IPR004872 Lipoprotein NlpA family Alide_3226 IPR007390 Sporulation stage V, protein R Alide_3227 IPR006698 Uncharacterised protein family UPF0229 Alide_3227 IPR036465 von Willebrand factor A-like domain superfamily Alide_3228 IPR013153 PrkA AAA domain Alide_3228 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3228 IPR010650 PrkA C-terminal domain Alide_3228 IPR016230 Serine-protein kinase, PrkA Alide_3229 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3229 IPR030489 Transcription regulator Rrf2-type, conserved site Alide_3229 IPR036390 Winged helix DNA-binding domain superfamily Alide_3229 IPR000944 Transcription regulator Rrf2-type Alide_3230 IPR019903 Repair of iron centres family Alide_3230 IPR012312 Haemerythrin-like Alide_3230 IPR023742 Iron-sulfur cluster repair protein YftE Alide_3231 IPR009050 Globin-like superfamily Alide_3231 IPR001486 Truncated hemoglobin Alide_3231 IPR012292 Globin/Protoglobin Alide_3234 IPR036812 NADP-dependent oxidoreductase domain superfamily Alide_3234 IPR023210 NADP-dependent oxidoreductase domain Alide_3236 IPR004839 Aminotransferase, class I/classII Alide_3236 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_3236 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_3236 IPR015424 Pyridoxal phosphate-dependent transferase Alide_3238 IPR005064 Bordetella uptake gene Alide_3238 IPR042100 Bordetella uptake gene, domain 1 Alide_3239 IPR000120 Amidase Alide_3239 IPR023631 Amidase signature domain Alide_3239 IPR020556 Amidase, conserved site Alide_3239 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit Alide_3239 IPR036928 Amidase signature (AS) superfamily Alide_3240 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3240 IPR036390 Winged helix DNA-binding domain superfamily Alide_3240 IPR000847 Transcription regulator HTH, LysR Alide_3240 IPR005119 LysR, substrate-binding Alide_3241 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Alide_3241 IPR000445 Helix-hairpin-helix motif Alide_3241 IPR003265 HhH-GPD domain Alide_3241 IPR004035 Endonuclease III, iron-sulphur binding site Alide_3241 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif Alide_3241 IPR004036 Endonuclease III-like, conserved site-2 Alide_3241 IPR011257 DNA glycosylase Alide_3241 IPR005759 Endonuclease III Alide_3243 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like Alide_3243 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic Alide_3243 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily Alide_3243 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal Alide_3244 IPR029062 Class I glutamine amidotransferase-like Alide_3244 IPR017929 CobB/CobQ glutamine amidotransferase Alide_3244 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Alide_3244 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 Alide_3244 IPR011698 CobB/CobQ-like glutamine amidotransferase Alide_3244 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3244 IPR004459 Cobyric acid synthase CobQ Alide_3246 IPR004485 Cobalamin biosynthesis CobD/CbiB Alide_3251 IPR036465 von Willebrand factor A-like domain superfamily Alide_3251 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Alide_3251 IPR008707 PilC beta-propeller domain Alide_3252 IPR012902 Prokaryotic N-terminal methylation site Alide_3252 IPR001082 Fimbrial protein pilin Alide_3253 IPR011549 Riboflavin-specific deaminase, C-terminal Alide_3253 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal Alide_3253 IPR004794 Riboflavin biosynthesis protein RibD Alide_3253 IPR016193 Cytidine deaminase-like Alide_3253 IPR024072 Dihydrofolate reductase-like domain superfamily Alide_3253 IPR016192 APOBEC/CMP deaminase, zinc-binding Alide_3253 IPR002125 Cytidine and deoxycytidylate deaminase domain Alide_3254 IPR025202 Phospholipase D-like domain Alide_3254 IPR001736 Phospholipase D/Transphosphatidylase Alide_3254 IPR030871 Cardiolipin synthase C Alide_3255 IPR018517 tRNA-dihydrouridine synthase, conserved site Alide_3255 IPR032886 tRNA-dihydrouridine(16) synthase Alide_3255 IPR001269 tRNA-dihydrouridine synthase Alide_3255 IPR035587 DUS-like, FMN-binding domain Alide_3255 IPR013785 Aldolase-type TIM barrel Alide_3255 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal Alide_3256 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_3256 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Alide_3256 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase Alide_3256 IPR007848 Methyltransferase small domain Alide_3258 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Alide_3258 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_3258 IPR015590 Aldehyde dehydrogenase domain Alide_3258 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent Alide_3258 IPR016161 Aldehyde/histidinol dehydrogenase Alide_3258 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_3260 IPR017730 Chaperonin ClpB Alide_3260 IPR003959 ATPase, AAA-type, core Alide_3260 IPR018368 ClpA/B, conserved site 1 Alide_3260 IPR001270 ClpA/B family Alide_3260 IPR028299 ClpA/B, conserved site 2 Alide_3260 IPR041546 ClpA/ClpB, AAA lid domain Alide_3260 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3260 IPR036628 Clp, N-terminal domain superfamily Alide_3260 IPR019489 Clp ATPase, C-terminal Alide_3260 IPR004176 Clp, N-terminal Alide_3260 IPR003593 AAA+ ATPase domain Alide_3261 IPR003448 Molybdopterin biosynthesis MoaE Alide_3261 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily Alide_3265 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA Alide_3265 IPR002220 DapA-like Alide_3265 IPR020625 Schiff base-forming aldolase, active site Alide_3265 IPR020624 Schiff base-forming aldolase, conserved site Alide_3265 IPR013785 Aldolase-type TIM barrel Alide_3267 IPR005111 MoeA, C-terminal, domain IV Alide_3267 IPR038987 Molybdopterin biosynthesis protein MoeA-like Alide_3267 IPR036135 MoeA, N-terminal and linker domain superfamily Alide_3267 IPR005110 MoeA, N-terminal and linker domain Alide_3267 IPR036425 MoaB/Mog-like domain superfamily Alide_3267 IPR036688 MoeA, C-terminal, domain IV superfamily Alide_3267 IPR001453 MoaB/Mog domain Alide_3267 IPR008284 Molybdenum cofactor biosynthesis, conserved site Alide_3268 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3268 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain Alide_3269 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Alide_3269 IPR004450 Threonine synthase-like Alide_3269 IPR029144 Threonine synthase, N-terminal Alide_3269 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Alide_3269 IPR037158 Threonine synthase, N-terminal domain superfamily Alide_3269 IPR001926 Pyridoxal-phosphate dependent enzyme Alide_3270 IPR022907 VapC family Alide_3270 IPR029060 PIN-like domain superfamily Alide_3270 IPR002716 PIN domain Alide_3272 IPR016204 Homoserine dehydrogenase Alide_3272 IPR001342 Homoserine dehydrogenase, catalytic Alide_3272 IPR019811 Homoserine dehydrogenase, conserved site Alide_3272 IPR036291 NAD(P)-binding domain superfamily Alide_3272 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding Alide_3272 IPR002912 ACT domain Alide_3273 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_3273 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_3273 IPR015424 Pyridoxal phosphate-dependent transferase Alide_3273 IPR004839 Aminotransferase, class I/classII Alide_3274 IPR036748 MTH938-like superfamily Alide_3274 IPR007523 NDUFAF3/Mth938 domain-containing protein Alide_3275 IPR042100 Bordetella uptake gene, domain 1 Alide_3275 IPR005064 Bordetella uptake gene Alide_3276 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3276 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3276 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3276 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3276 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3276 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3277 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3277 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3277 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3277 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3277 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3277 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3278 IPR029035 DHS-like NAD/FAD-binding domain superfamily Alide_3278 IPR001308 Electron transfer flavoprotein alpha subunit/FixB Alide_3278 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal Alide_3278 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Alide_3278 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Alide_3278 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Alide_3278 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_3279 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site Alide_3279 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Alide_3279 IPR012255 Electron transfer flavoprotein, beta subunit Alide_3279 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal Alide_3279 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_3280 IPR042100 Bordetella uptake gene, domain 1 Alide_3280 IPR005064 Bordetella uptake gene Alide_3281 IPR002155 Thiolase Alide_3281 IPR020616 Thiolase, N-terminal Alide_3281 IPR020617 Thiolase, C-terminal Alide_3281 IPR020610 Thiolase, active site Alide_3281 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_3281 IPR016039 Thiolase-like Alide_3281 IPR020613 Thiolase, conserved site Alide_3283 IPR020610 Thiolase, active site Alide_3283 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_3283 IPR020617 Thiolase, C-terminal Alide_3283 IPR020616 Thiolase, N-terminal Alide_3283 IPR016039 Thiolase-like Alide_3283 IPR020613 Thiolase, conserved site Alide_3283 IPR002155 Thiolase Alide_3283 IPR012805 Acetyl-CoA C-acyltransferase FadA Alide_3284 IPR029045 ClpP/crotonase-like domain superfamily Alide_3284 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_3284 IPR001753 Enoyl-CoA hydratase/isomerase Alide_3284 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_3285 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3285 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3285 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3285 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3285 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3285 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3285 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_3286 IPR016102 Succinyl-CoA synthetase-like Alide_3286 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Alide_3286 IPR036291 NAD(P)-binding domain superfamily Alide_3286 IPR000182 GNAT domain Alide_3286 IPR003781 CoA-binding Alide_3286 IPR011761 ATP-grasp fold Alide_3286 IPR013815 ATP-grasp fold, subdomain 1 Alide_3286 IPR016181 Acyl-CoA N-acyltransferase Alide_3289 IPR029045 ClpP/crotonase-like domain superfamily Alide_3289 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_3289 IPR001753 Enoyl-CoA hydratase/isomerase Alide_3289 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_3290 IPR036291 NAD(P)-binding domain superfamily Alide_3290 IPR012802 Fatty oxidation complex, alpha subunit FadJ Alide_3290 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding Alide_3290 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal Alide_3290 IPR001753 Enoyl-CoA hydratase/isomerase Alide_3290 IPR029045 ClpP/crotonase-like domain superfamily Alide_3290 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_3294 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3294 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3294 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3294 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3294 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3294 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3295 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3295 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3295 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3295 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3295 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3295 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3296 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_3296 IPR001753 Enoyl-CoA hydratase/isomerase Alide_3296 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_3296 IPR029045 ClpP/crotonase-like domain superfamily Alide_3297 IPR037401 SnoaL-like domain Alide_3297 IPR032710 NTF2-like domain superfamily Alide_3298 IPR042100 Bordetella uptake gene, domain 1 Alide_3298 IPR005064 Bordetella uptake gene Alide_3299 IPR036291 NAD(P)-binding domain superfamily Alide_3299 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_3299 IPR011294 3-hydroxybutyrate dehydrogenase Alide_3299 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_3300 IPR023606 CoA-transferase family III domain superfamily Alide_3300 IPR003673 CoA-transferase family III Alide_3301 IPR036291 NAD(P)-binding domain superfamily Alide_3301 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_3301 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_3302 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_3302 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_3302 IPR036291 NAD(P)-binding domain superfamily Alide_3302 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Alide_3303 IPR023606 CoA-transferase family III domain superfamily Alide_3303 IPR003673 CoA-transferase family III Alide_3304 IPR042100 Bordetella uptake gene, domain 1 Alide_3304 IPR005064 Bordetella uptake gene Alide_3305 IPR013785 Aldolase-type TIM barrel Alide_3305 IPR023663 NADPH dehydrogenase Alide_3305 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Alide_3306 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_3306 IPR013216 Methyltransferase type 11 Alide_3307 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3307 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site Alide_3307 IPR023546 Methylated-DNA--protein-cysteine methyltransferase Alide_3307 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding Alide_3307 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily Alide_3307 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain Alide_3307 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Alide_3308 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR Alide_3308 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3309 IPR003439 ABC transporter-like Alide_3309 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3309 IPR017871 ABC transporter, conserved site Alide_3309 IPR003593 AAA+ ATPase domain Alide_3310 IPR037294 ABC transporter, BtuC-like Alide_3310 IPR000522 ABC transporter, permease protein, BtuC-like Alide_3312 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3312 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase Alide_3313 IPR017929 CobB/CobQ glutamine amidotransferase Alide_3313 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Alide_3313 IPR011698 CobB/CobQ-like glutamine amidotransferase Alide_3313 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3313 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA Alide_3313 IPR029062 Class I glutamine amidotransferase-like Alide_3314 IPR010917 TonB-dependent receptor, conserved site Alide_3314 IPR010101 TonB-dependent vitamin B12 transporter BtuB Alide_3314 IPR000531 TonB-dependent receptor-like, beta-barrel Alide_3314 IPR037066 TonB-dependent receptor, plug domain superfamily Alide_3314 IPR039426 Vitamin B12 transporter BtuB-like Alide_3314 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Alide_3314 IPR012910 TonB-dependent receptor, plug domain Alide_3317 IPR001633 EAL domain Alide_3317 IPR029787 Nucleotide cyclase Alide_3317 IPR005330 MHYT domain Alide_3317 IPR000160 GGDEF domain Alide_3317 IPR035919 EAL domain superfamily Alide_3318 IPR003607 HD/PDEase domain Alide_3318 IPR037522 HD-GYP domain Alide_3320 IPR023404 Radical SAM, alpha/beta horseshoe Alide_3320 IPR007197 Radical SAM Alide_3320 IPR010723 HemN, C-terminal Alide_3320 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN Alide_3320 IPR006638 Elp3/MiaB/NifB Alide_3320 IPR034505 Anaerobic coproporphyrinogen-III oxidase Alide_3321 IPR018490 Cyclic nucleotide-binding-like Alide_3321 IPR018335 Transcription regulator HTH, Crp-type, conserved site Alide_3321 IPR036390 Winged helix DNA-binding domain superfamily Alide_3321 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3321 IPR014710 RmlC-like jelly roll fold Alide_3321 IPR012318 Crp-type HTH domain Alide_3321 IPR000595 Cyclic nucleotide-binding domain Alide_3324 IPR013783 Immunoglobulin-like fold Alide_3324 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG Alide_3324 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_3324 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Alide_3324 IPR032879 FixG, C-terminal immunoglobulin-like domain Alide_3325 IPR009056 Cytochrome c-like domain Alide_3325 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Alide_3325 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily Alide_3325 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal Alide_3325 IPR008168 Cytochrome c, class IC Alide_3325 IPR036909 Cytochrome c-like domain superfamily Alide_3328 IPR004677 Cytochrome c oxidase cbb3-type, subunit I Alide_3328 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site Alide_3328 IPR000883 Cytochrome c oxidase subunit I Alide_3328 IPR023616 Cytochrome c oxidase-like, subunit I domain Alide_3328 IPR036927 Cytochrome c oxidase-like, subunit I superfamily Alide_3330 IPR018303 P-type ATPase, phosphorylation site Alide_3330 IPR036412 HAD-like superfamily Alide_3330 IPR000579 Cation-transporting P-type ATPase A/B Alide_3330 IPR008250 P-type ATPase, A domain superfamily Alide_3330 IPR023298 P-type ATPase, transmembrane domain superfamily Alide_3330 IPR036163 Heavy metal-associated domain superfamily Alide_3330 IPR023299 P-type ATPase, cytoplasmic domain N Alide_3330 IPR006121 Heavy metal-associated domain, HMA Alide_3330 IPR017969 Heavy-metal-associated, conserved site Alide_3330 IPR023214 HAD superfamily Alide_3330 IPR027256 P-type ATPase, subfamily IB Alide_3330 IPR001757 P-type ATPase Alide_3332 IPR020845 AMP-binding, conserved site Alide_3332 IPR020459 AMP-binding Alide_3332 IPR025110 AMP-binding enzyme, C-terminal domain Alide_3332 IPR042099 AMP-dependent synthetase-like superfamily Alide_3332 IPR000873 AMP-dependent synthetase/ligase Alide_3333 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_3333 IPR029045 ClpP/crotonase-like domain superfamily Alide_3333 IPR001753 Enoyl-CoA hydratase/isomerase Alide_3334 IPR042100 Bordetella uptake gene, domain 1 Alide_3334 IPR005064 Bordetella uptake gene Alide_3336 IPR008920 Transcription regulator FadR/GntR, C-terminal Alide_3336 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3336 IPR000485 AsnC-type HTH domain Alide_3336 IPR011711 GntR, C-terminal Alide_3336 IPR000524 Transcription regulator HTH, GntR Alide_3336 IPR036390 Winged helix DNA-binding domain superfamily Alide_3337 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt Alide_3338 IPR012347 Ferritin-like Alide_3338 IPR008331 Ferritin/DPS protein domain Alide_3338 IPR009078 Ferritin-like superfamily Alide_3338 IPR009040 Ferritin-like diiron domain Alide_3338 IPR002024 Bacterioferritin Alide_3340 IPR042096 Dihydroxy-acid dehydratase, C-terminal Alide_3340 IPR037237 IlvD/EDD, N-terminal domain Alide_3340 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site Alide_3340 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase Alide_3340 IPR004404 Dihydroxy-acid dehydratase Alide_3341 IPR037237 IlvD/EDD, N-terminal domain Alide_3341 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site Alide_3341 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase Alide_3341 IPR004404 Dihydroxy-acid dehydratase Alide_3341 IPR042096 Dihydroxy-acid dehydratase, C-terminal Alide_3343 IPR009056 Cytochrome c-like domain Alide_3343 IPR036909 Cytochrome c-like domain superfamily Alide_3343 IPR002324 Cytochrome c, class ID Alide_3344 IPR003439 ABC transporter-like Alide_3344 IPR003593 AAA+ ATPase domain Alide_3344 IPR015854 ABC transporter, lipoprotein release, LolD Alide_3344 IPR011924 Lipoprotein releasing system, ATP-binding protein Alide_3344 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3344 IPR017871 ABC transporter, conserved site Alide_3345 IPR025857 MacB-like periplasmic core domain Alide_3345 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E Alide_3345 IPR003838 ABC transporter permease protein domain Alide_3347 IPR001667 DDH domain Alide_3347 IPR004610 Bacterial RecJ exonuclease Alide_3347 IPR003156 DHHA1 domain Alide_3347 IPR041122 RecJ, OB domain Alide_3347 IPR038763 DHH phosphoesterase superfamily Alide_3348 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Alide_3348 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Alide_3348 IPR004090 Chemotaxis methyl-accepting receptor Alide_3348 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Alide_3348 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Alide_3348 IPR003660 HAMP domain Alide_3349 IPR004013 PHP domain Alide_3349 IPR003141 Polymerase/histidinol phosphatase, N-terminal Alide_3349 IPR016195 Polymerase/histidinol phosphatase-like Alide_3350 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Alide_3350 IPR006070 YrdC-like domain Alide_3351 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Alide_3351 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Alide_3351 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Alide_3351 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Alide_3351 IPR003660 HAMP domain Alide_3351 IPR004090 Chemotaxis methyl-accepting receptor Alide_3352 IPR008915 Peptidase M50 Alide_3353 IPR002305 Aminoacyl-tRNA synthetase, class Ic Alide_3353 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_3353 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Alide_3353 IPR024109 Tryptophan-tRNA ligase, bacterial-type Alide_3353 IPR036913 YegP-like superfamily Alide_3353 IPR002306 Tryptophan-tRNA ligase Alide_3354 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3354 IPR011006 CheY-like superfamily Alide_3354 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_3354 IPR016032 Signal transduction response regulator, C-terminal effector Alide_3354 IPR001789 Signal transduction response regulator, receiver domain Alide_3354 IPR039420 Transcriptional regulatory protein WalR-like Alide_3356 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_3356 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_3356 IPR003594 Histidine kinase/HSP90-like ATPase Alide_3356 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_3356 IPR005467 Histidine kinase domain Alide_3356 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_3357 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Alide_3357 IPR003362 Bacterial sugar transferase Alide_3359 IPR021134 Bestrophin/UPF0187 Alide_3360 IPR006195 Aminoacyl-tRNA synthetase, class II Alide_3360 IPR002317 Serine-tRNA ligase, type1 Alide_3360 IPR015866 Serine-tRNA synthetase, type1, N-terminal Alide_3360 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily Alide_3360 IPR033729 Serine-tRNA ligase catalytic core domain Alide_3360 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm Alide_3360 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Alide_3362 IPR016169 FAD-binding, type PCMH, subdomain 2 Alide_3362 IPR036318 FAD-binding, type PCMH-like superfamily Alide_3362 IPR002550 CNNM, transmembrane domain Alide_3362 IPR005170 Transporter-associated domain Alide_3362 IPR000644 CBS domain Alide_3363 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Alide_3364 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Alide_3365 IPR020891 Uncharacterised protein family UPF0758, conserved site Alide_3365 IPR010994 RuvA domain 2-like Alide_3365 IPR025657 RadC-like JAB domain Alide_3365 IPR037518 MPN domain Alide_3365 IPR001405 Uncharacterised protein family UPF0758 Alide_3367 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3367 IPR036063 Smr domain superfamily Alide_3367 IPR000432 DNA mismatch repair protein MutS, C-terminal Alide_3367 IPR007696 DNA mismatch repair protein MutS, core Alide_3367 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Alide_3367 IPR005747 Endonuclease MutS2 Alide_3367 IPR002625 Smr domain Alide_3368 IPR005064 Bordetella uptake gene Alide_3368 IPR042100 Bordetella uptake gene, domain 1 Alide_3369 IPR033941 3-Isopropylmalate dehydratase, catalytic domain Alide_3369 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit Alide_3369 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Alide_3369 IPR036008 Aconitase, iron-sulfur domain Alide_3369 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic Alide_3369 IPR018136 Aconitase family, 4Fe-4S cluster binding site Alide_3369 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain Alide_3370 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Alide_3370 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain Alide_3370 IPR033940 3-isopropylmalate dehydratase, swivel domain Alide_3370 IPR011827 Hydrolyase LeuD/HacB/DmdB Alide_3371 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_3371 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site Alide_3371 IPR039556 ICL/PEPM domain Alide_3371 IPR040442 Pyruvate kinase-like domain superfamily Alide_3372 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3372 IPR036390 Winged helix DNA-binding domain superfamily Alide_3372 IPR005021 Terminase large subunit, Lambdalikevirus-type Alide_3373 IPR001486 Truncated hemoglobin Alide_3373 IPR019795 Globin, bacterial-like, conserved site Alide_3373 IPR009050 Globin-like superfamily Alide_3373 IPR012292 Globin/Protoglobin Alide_3377 IPR038766 Membrane component of ABC transporter, predicted Alide_3378 IPR016193 Cytidine deaminase-like Alide_3378 IPR003786 Sulfur carrier protein FdhD Alide_3382 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Alide_3382 IPR000813 7Fe ferredoxin Alide_3382 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_3383 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site Alide_3383 IPR041924 Formate dehydrogenase H, N-terminal Alide_3383 IPR006657 Molybdopterin dinucleotide-binding domain Alide_3383 IPR006656 Molybdopterin oxidoreductase Alide_3383 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Alide_3383 IPR041925 Formate dehydrogenase H, molybdopterin-binding domain Alide_3383 IPR009010 Aspartate decarboxylase-like domain superfamily Alide_3383 IPR006478 Formate dehydrogenase, alpha subunit Alide_3383 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site Alide_3389 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Alide_3389 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_3389 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Alide_3389 IPR036010 2Fe-2S ferredoxin-like superfamily Alide_3389 IPR009010 Aspartate decarboxylase-like domain superfamily Alide_3389 IPR041924 Formate dehydrogenase H, N-terminal Alide_3389 IPR006478 Formate dehydrogenase, alpha subunit Alide_3389 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding Alide_3389 IPR006656 Molybdopterin oxidoreductase Alide_3389 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Alide_3389 IPR006657 Molybdopterin dinucleotide-binding domain Alide_3390 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Alide_3390 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site Alide_3390 IPR011537 NADH ubiquinone oxidoreductase, F subunit Alide_3390 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Alide_3390 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Alide_3390 IPR019554 Soluble ligand binding domain Alide_3390 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain Alide_3391 IPR011206 Citrate lyase beta subunit-like Alide_3391 IPR040442 Pyruvate kinase-like domain superfamily Alide_3391 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_3391 IPR005000 HpcH/HpaI aldolase/citrate lyase domain Alide_3393 IPR011711 GntR, C-terminal Alide_3393 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3393 IPR008920 Transcription regulator FadR/GntR, C-terminal Alide_3393 IPR036390 Winged helix DNA-binding domain superfamily Alide_3393 IPR000524 Transcription regulator HTH, GntR Alide_3394 IPR003673 CoA-transferase family III Alide_3394 IPR023606 CoA-transferase family III domain superfamily Alide_3395 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3395 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3395 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3395 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3395 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3395 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_3395 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3397 IPR042100 Bordetella uptake gene, domain 1 Alide_3397 IPR005064 Bordetella uptake gene Alide_3399 IPR019591 Mrp/NBP35 ATP-binding protein Alide_3399 IPR000808 Mrp, conserved site Alide_3399 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Alide_3399 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3400 IPR004695 Voltage-dependent anion channel Alide_3401 IPR023061 Selenophosphate synthetase, class I Alide_3401 IPR016188 PurM-like, N-terminal domain Alide_3401 IPR004536 Selenophosphate synthetase Alide_3401 IPR036921 PurM-like, N-terminal domain superfamily Alide_3401 IPR036676 PurM-like, C-terminal domain superfamily Alide_3401 IPR010918 PurM-like, C-terminal domain Alide_3402 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase Alide_3402 IPR036873 Rhodanese-like domain superfamily Alide_3402 IPR001763 Rhodanese-like domain Alide_3402 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3405 IPR023458 Methionine-tRNA ligase, type 1 Alide_3405 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal Alide_3405 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Alide_3405 IPR014758 Methionyl-tRNA synthetase Alide_3405 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain Alide_3405 IPR015413 Methionyl/Leucyl tRNA synthetase Alide_3405 IPR033911 Methioninyl-tRNA synthetase core domain Alide_3405 IPR012340 Nucleic acid-binding, OB-fold Alide_3405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_3405 IPR002547 tRNA-binding domain Alide_3405 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Alide_3405 IPR029038 Methionyl-tRNA synthetase, Zn-domain Alide_3407 IPR015424 Pyridoxal phosphate-dependent transferase Alide_3407 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_3407 IPR000524 Transcription regulator HTH, GntR Alide_3407 IPR004839 Aminotransferase, class I/classII Alide_3407 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3407 IPR036390 Winged helix DNA-binding domain superfamily Alide_3408 IPR004711 Benzoate transporter Alide_3409 IPR011078 Pyridoxal phosphate homeostasis protein Alide_3409 IPR029066 PLP-binding barrel Alide_3409 IPR001608 Alanine racemase, N-terminal Alide_3410 IPR017926 Glutamine amidotransferase Alide_3410 IPR029062 Class I glutamine amidotransferase-like Alide_3410 IPR010139 Imidazole glycerol phosphate synthase, subunit H Alide_3411 IPR020449 Transcription regulator HTH, AraC- type Alide_3411 IPR018060 DNA binding HTH domain, AraC-type Alide_3411 IPR009057 Homeobox-like domain superfamily Alide_3411 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal Alide_3412 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Alide_3412 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_3412 IPR014614 Uncharacterised conserved protein UCP036654 Alide_3413 IPR037396 FMN hydroxy acid dehydrogenase domain Alide_3413 IPR000262 FMN-dependent dehydrogenase Alide_3413 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent Alide_3413 IPR013785 Aldolase-type TIM barrel Alide_3413 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site Alide_3413 IPR020920 L-lactate dehydrogenase, bacterial Alide_3414 IPR029061 Thiamin diphosphate-binding fold Alide_3414 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Alide_3414 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Alide_3417 IPR003768 Segregation and condensation protein A Alide_3420 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Alide_3420 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Alide_3420 IPR005288 L-aspartate oxidase Alide_3420 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal Alide_3420 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily Alide_3420 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_3422 IPR005801 ADC synthase Alide_3422 IPR015890 Chorismate-utilising enzyme, C-terminal Alide_3422 IPR006805 Anthranilate synthase component I, N-terminal Alide_3422 IPR005802 Aminodeoxychorismate synthase, component I Alide_3422 IPR019999 Anthranilate synthase component I-like Alide_3423 IPR003473 Quinolinate synthetase A Alide_3423 IPR023513 Quinolinate synthase A, type 1 Alide_3423 IPR036094 Quinolinate synthetase A superfamily Alide_3424 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal Alide_3424 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily Alide_3424 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal Alide_3424 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal Alide_3424 IPR004393 Nicotinate-nucleotide pyrophosphorylase Alide_3424 IPR013785 Aldolase-type TIM barrel Alide_3424 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Alide_3426 IPR003700 Ketopantoate hydroxymethyltransferase Alide_3426 IPR040442 Pyruvate kinase-like domain superfamily Alide_3426 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_3427 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_3427 IPR003721 Pantoate-beta-alanine ligase Alide_3427 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain Alide_3428 IPR036390 Winged helix DNA-binding domain superfamily Alide_3428 IPR000847 Transcription regulator HTH, LysR Alide_3428 IPR005119 LysR, substrate-binding Alide_3428 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3429 IPR005064 Bordetella uptake gene Alide_3429 IPR042100 Bordetella uptake gene, domain 1 Alide_3430 IPR015995 Microcystin LR degradation protein MlrC, N-terminal Alide_3430 IPR009197 Microcystin LR degradation protein MlrC Alide_3430 IPR010799 Microcystin LR degradation protein MlrC, C-terminal Alide_3431 IPR002781 Transmembrane protein TauE-like Alide_3432 IPR042100 Bordetella uptake gene, domain 1 Alide_3432 IPR005064 Bordetella uptake gene Alide_3434 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal Alide_3434 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent Alide_3434 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Alide_3434 IPR036291 NAD(P)-binding domain superfamily Alide_3434 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal Alide_3434 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_3435 IPR003708 Bacterial protein export chaperone SecB Alide_3435 IPR035958 SecB-like superfamily Alide_3436 IPR011900 Glutaredoxin, GrxC Alide_3436 IPR014025 Glutaredoxin subgroup Alide_3436 IPR002109 Glutaredoxin Alide_3436 IPR011767 Glutaredoxin active site Alide_3436 IPR036249 Thioredoxin-like superfamily Alide_3437 IPR023695 Thiosulfate sulfurtransferase, bacterial Alide_3437 IPR036873 Rhodanese-like domain superfamily Alide_3437 IPR001763 Rhodanese-like domain Alide_3438 IPR013078 Histidine phosphatase superfamily, clade-1 Alide_3438 IPR029033 Histidine phosphatase superfamily Alide_3438 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site Alide_3438 IPR005952 Phosphoglycerate mutase 1 Alide_3439 IPR005151 Tail specific protease Alide_3439 IPR004447 C-terminal-processing peptidase S41A Alide_3439 IPR001478 PDZ domain Alide_3439 IPR036034 PDZ superfamily Alide_3439 IPR029045 ClpP/crotonase-like domain superfamily Alide_3440 IPR012730 Molybdopterin synthase sulfurylase MoeB Alide_3440 IPR035985 Ubiquitin-activating enzyme Alide_3440 IPR000594 THIF-type NAD/FAD binding fold Alide_3442 IPR001789 Signal transduction response regulator, receiver domain Alide_3442 IPR016032 Signal transduction response regulator, C-terminal effector Alide_3442 IPR011006 CheY-like superfamily Alide_3442 IPR000792 Transcription regulator LuxR, C-terminal Alide_3443 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Alide_3443 IPR033480 Single Cache domain 2 Alide_3443 IPR017171 Signal transduction histidine kinase, MctS Alide_3443 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_3443 IPR003594 Histidine kinase/HSP90-like ATPase Alide_3444 IPR009760 Protein of unknown function DUF1328 Alide_3446 IPR014004 Transport-associated and nodulation domain, bacteria Alide_3446 IPR007055 BON domain Alide_3447 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_3447 IPR004821 Cytidyltransferase-like domain Alide_3447 IPR001980 Phosphopantetheine adenylyltransferase Alide_3448 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_3448 IPR004398 RNA methyltransferase, RsmD Alide_3448 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Alide_3449 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Alide_3449 IPR007863 Peptidase M16, C-terminal Alide_3450 IPR001431 Peptidase M16, zinc-binding site Alide_3450 IPR007863 Peptidase M16, C-terminal Alide_3450 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Alide_3450 IPR011765 Peptidase M16, N-terminal Alide_3451 IPR036225 SRP/SRP receptor, N-terminal Alide_3451 IPR003593 AAA+ ATPase domain Alide_3451 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3451 IPR004390 Signal-recognition particle receptor FtsY Alide_3451 IPR013822 Signal recognition particle SRP54, helical bundle Alide_3451 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Alide_3451 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily Alide_3452 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3452 IPR000847 Transcription regulator HTH, LysR Alide_3452 IPR005119 LysR, substrate-binding Alide_3452 IPR036390 Winged helix DNA-binding domain superfamily Alide_3453 IPR013785 Aldolase-type TIM barrel Alide_3453 IPR002220 DapA-like Alide_3453 IPR017655 5-dehydro-4-deoxyglucarate dehydratase Alide_3454 IPR042100 Bordetella uptake gene, domain 1 Alide_3454 IPR005064 Bordetella uptake gene Alide_3455 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_3455 IPR036291 NAD(P)-binding domain superfamily Alide_3456 IPR034611 D-tartrate dehydratase Alide_3456 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Alide_3456 IPR029017 Enolase-like, N-terminal Alide_3456 IPR029065 Enolase C-terminal domain-like Alide_3456 IPR034593 Mandelate racemase-like Alide_3456 IPR036849 Enolase-like, C-terminal domain superfamily Alide_3458 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_3458 IPR005064 Bordetella uptake gene Alide_3458 IPR042100 Bordetella uptake gene, domain 1 Alide_3459 IPR042100 Bordetella uptake gene, domain 1 Alide_3459 IPR005064 Bordetella uptake gene Alide_3460 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Alide_3460 IPR036008 Aconitase, iron-sulfur domain Alide_3460 IPR018136 Aconitase family, 4Fe-4S cluster binding site Alide_3460 IPR006249 Aconitase/Iron-responsive element-binding protein 2 Alide_3460 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Alide_3460 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain Alide_3460 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain Alide_3462 IPR008258 Transglycosylase SLT domain 1 Alide_3462 IPR000189 Prokaryotic transglycosylase, active site Alide_3462 IPR023346 Lysozyme-like domain superfamily Alide_3462 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Alide_3462 IPR023703 Membrane-bound lytic murein transglycosylase F Alide_3463 IPR015943 WD40/YVTN repeat-like-containing domain superfamily Alide_3463 IPR019405 Lactonase, 7-bladed beta propeller Alide_3463 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Alide_3464 IPR013154 Alcohol dehydrogenase, N-terminal Alide_3464 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Alide_3464 IPR036291 NAD(P)-binding domain superfamily Alide_3464 IPR020843 Polyketide synthase, enoylreductase domain Alide_3464 IPR013149 Alcohol dehydrogenase, C-terminal Alide_3464 IPR011032 GroES-like superfamily Alide_3465 IPR017630 4-oxalocrotonate decarboxylase Alide_3465 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily Alide_3466 IPR039420 Transcriptional regulatory protein WalR-like Alide_3466 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3466 IPR001789 Signal transduction response regulator, receiver domain Alide_3466 IPR016032 Signal transduction response regulator, C-terminal effector Alide_3466 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_3466 IPR011006 CheY-like superfamily Alide_3467 IPR013727 Two-component sensor kinase, N-terminal Alide_3467 IPR003660 HAMP domain Alide_3467 IPR003594 Histidine kinase/HSP90-like ATPase Alide_3467 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_3467 IPR005467 Histidine kinase domain Alide_3467 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_3467 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_3467 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_3469 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Alide_3469 IPR016174 Di-haem cytochrome, transmembrane Alide_3471 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Alide_3471 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA Alide_3471 IPR001036 Acriflavin resistance protein Alide_3475 IPR009042 RNA polymerase sigma-70 region 1.2 Alide_3475 IPR000943 RNA polymerase sigma-70 Alide_3475 IPR014284 RNA polymerase sigma-70 like domain Alide_3475 IPR007627 RNA polymerase sigma-70 region 2 Alide_3475 IPR007630 RNA polymerase sigma-70 region 4 Alide_3475 IPR013325 RNA polymerase sigma factor, region 2 Alide_3475 IPR013324 RNA polymerase sigma factor, region 3/4-like Alide_3475 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria Alide_3476 IPR042100 Bordetella uptake gene, domain 1 Alide_3476 IPR005064 Bordetella uptake gene Alide_3477 IPR036249 Thioredoxin-like superfamily Alide_3477 IPR003782 Copper chaperone SCO1/SenC Alide_3478 IPR030470 UbiA prenyltransferase conserved site Alide_3478 IPR006369 Protohaem IX farnesyltransferase Alide_3478 IPR000537 UbiA prenyltransferase family Alide_3483 IPR000298 Cytochrome c oxidase subunit III-like Alide_3483 IPR024791 Cytochrome c oxidase subunit III Alide_3483 IPR033945 Cytochrome c oxidase subunit III domain Alide_3483 IPR035973 Cytochrome c oxidase subunit III-like superfamily Alide_3483 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle Alide_3485 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Alide_3485 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 Alide_3487 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site Alide_3487 IPR014241 Cytochrome c oxidase, subunit I bacterial type Alide_3487 IPR033944 Cytochrome c oxidase subunit I domain Alide_3487 IPR036927 Cytochrome c oxidase-like, subunit I superfamily Alide_3487 IPR023616 Cytochrome c oxidase-like, subunit I domain Alide_3487 IPR000883 Cytochrome c oxidase subunit I Alide_3488 IPR008972 Cupredoxin Alide_3488 IPR001505 Copper centre Cu(A) Alide_3488 IPR002429 Cytochrome c oxidase subunit II-like C-terminal Alide_3488 IPR014222 Cytochrome c oxidase, subunit II Alide_3488 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain Alide_3488 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Alide_3489 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_3489 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC Alide_3489 IPR013216 Methyltransferase type 11 Alide_3490 IPR005222 Competence protein ComF Alide_3490 IPR029057 Phosphoribosyltransferase-like Alide_3490 IPR000836 Phosphoribosyltransferase domain Alide_3491 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Alide_3491 IPR029028 Alpha/beta knot methyltransferases Alide_3491 IPR001537 tRNA/rRNA methyltransferase, SpoU type Alide_3491 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase Alide_3492 IPR000847 Transcription regulator HTH, LysR Alide_3492 IPR036390 Winged helix DNA-binding domain superfamily Alide_3492 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3492 IPR005119 LysR, substrate-binding Alide_3494 IPR009744 VirC1 Alide_3494 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3495 IPR004778 Homoserine/Threonine efflux protein Alide_3495 IPR001123 Amino acid exporter protein, LeuE-type Alide_3496 IPR023941 Glutathione-regulated potassium-efflux system protein KefC Alide_3496 IPR006036 Potassium uptake protein TrkA Alide_3496 IPR038770 Sodium/solute symporter superfamily Alide_3496 IPR004771 K+/H+ exchanger Alide_3496 IPR006153 Cation/H+ exchanger Alide_3496 IPR003148 Regulator of K+ conductance, N-terminal Alide_3496 IPR036291 NAD(P)-binding domain superfamily Alide_3497 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Alide_3497 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3497 IPR011663 UbiC transcription regulator-associated Alide_3497 IPR036390 Winged helix DNA-binding domain superfamily Alide_3497 IPR000524 Transcription regulator HTH, GntR Alide_3498 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_3498 IPR039556 ICL/PEPM domain Alide_3498 IPR012697 Carboxyvinyl-carboxyphosphonate phosphorylmutase Alide_3498 IPR040442 Pyruvate kinase-like domain superfamily Alide_3498 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site Alide_3499 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Alide_3499 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain Alide_3499 IPR018136 Aconitase family, 4Fe-4S cluster binding site Alide_3499 IPR036008 Aconitase, iron-sulfur domain Alide_3499 IPR033941 3-Isopropylmalate dehydratase, catalytic domain Alide_3499 IPR004430 3-isopropylmalate dehydratase, large subunit Alide_3500 IPR033940 3-isopropylmalate dehydratase, swivel domain Alide_3500 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Alide_3500 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain Alide_3500 IPR004431 3-isopropylmalate dehydratase, small subunit Alide_3501 IPR042100 Bordetella uptake gene, domain 1 Alide_3501 IPR005064 Bordetella uptake gene Alide_3502 IPR007400 PrpF protein Alide_3504 IPR042100 Bordetella uptake gene, domain 1 Alide_3504 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_3504 IPR005064 Bordetella uptake gene Alide_3505 IPR042100 Bordetella uptake gene, domain 1 Alide_3505 IPR005064 Bordetella uptake gene Alide_3506 IPR011650 Peptidase M20, dimerisation domain Alide_3506 IPR036264 Bacterial exopeptidase dimerisation domain Alide_3506 IPR017439 Amidohydrolase Alide_3506 IPR002933 Peptidase M20 Alide_3507 IPR042100 Bordetella uptake gene, domain 1 Alide_3507 IPR005064 Bordetella uptake gene Alide_3508 IPR005119 LysR, substrate-binding Alide_3508 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3508 IPR036390 Winged helix DNA-binding domain superfamily Alide_3508 IPR000847 Transcription regulator HTH, LysR Alide_3510 IPR042100 Bordetella uptake gene, domain 1 Alide_3510 IPR005064 Bordetella uptake gene Alide_3511 IPR011283 Acetoacetyl-CoA reductase Alide_3511 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_3511 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_3511 IPR036291 NAD(P)-binding domain superfamily Alide_3512 IPR002155 Thiolase Alide_3512 IPR016039 Thiolase-like Alide_3512 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_3512 IPR020617 Thiolase, C-terminal Alide_3512 IPR020613 Thiolase, conserved site Alide_3512 IPR020616 Thiolase, N-terminal Alide_3512 IPR012793 Beta-ketoadipyl CoA thiolase Alide_3512 IPR020610 Thiolase, active site Alide_3513 IPR012791 3-oxoacid CoA-transferase, subunit B Alide_3513 IPR004165 Coenzyme A transferase family I Alide_3513 IPR004164 Coenzyme A transferase active site Alide_3513 IPR037171 NagB/RpiA transferase-like Alide_3514 IPR012792 3-oxoacid CoA-transferase, subunit A Alide_3514 IPR004165 Coenzyme A transferase family I Alide_3514 IPR004163 Coenzyme A transferase binding site Alide_3514 IPR037171 NagB/RpiA transferase-like Alide_3515 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3515 IPR005471 Transcription regulator IclR, N-terminal Alide_3515 IPR014757 Transcription regulator IclR, C-terminal Alide_3515 IPR029016 GAF-like domain superfamily Alide_3515 IPR036390 Winged helix DNA-binding domain superfamily Alide_3515 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR Alide_3518 IPR024167 Cytochrome c4-like Alide_3518 IPR036909 Cytochrome c-like domain superfamily Alide_3518 IPR009056 Cytochrome c-like domain Alide_3519 IPR019489 Clp ATPase, C-terminal Alide_3519 IPR010603 Zinc finger, ClpX C4-type Alide_3519 IPR038366 Zinc finger, ClpX C4-type superfamily Alide_3519 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3519 IPR004487 Clp protease, ATP-binding subunit ClpX Alide_3519 IPR003593 AAA+ ATPase domain Alide_3519 IPR003959 ATPase, AAA-type, core Alide_3521 IPR005064 Bordetella uptake gene Alide_3521 IPR042100 Bordetella uptake gene, domain 1 Alide_3522 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3522 IPR036390 Winged helix DNA-binding domain superfamily Alide_3522 IPR033532 Arabinose metabolism transcriptional repressor, ligand-binding domain Alide_3522 IPR000524 Transcription regulator HTH, GntR Alide_3522 IPR028082 Periplasmic binding protein-like I Alide_3523 IPR003673 CoA-transferase family III Alide_3523 IPR023606 CoA-transferase family III domain superfamily Alide_3524 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3524 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3524 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3524 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3524 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3524 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3525 IPR001753 Enoyl-CoA hydratase/isomerase Alide_3525 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_3525 IPR029045 ClpP/crotonase-like domain superfamily Alide_3525 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_3529 IPR007452 Translocation and assembly module TamB Alide_3535 IPR023346 Lysozyme-like domain superfamily Alide_3535 IPR000726 Glycoside hydrolase, family 19, catalytic Alide_3553 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly Alide_3590 IPR018117 DNA methylase, C-5 cytosine-specific, active site Alide_3590 IPR001525 C-5 cytosine methyltransferase Alide_3590 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site Alide_3590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_3601 IPR005094 Endonuclease relaxase, MobA/VirD2 Alide_3603 IPR012263 Adenine modification methylase, M.EcoRV-type Alide_3603 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Alide_3603 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_3603 IPR023095 Adenine-specific methyltransferase, domain 2 Alide_3603 IPR012327 D12 class N6 adenine-specific DNA methyltransferase Alide_3608 IPR034214 Ba3-like heme-copper oxidase subunit II, C-terminal Alide_3608 IPR001505 Copper centre Cu(A) Alide_3608 IPR002429 Cytochrome c oxidase subunit II-like C-terminal Alide_3608 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Alide_3608 IPR015209 Cytochrome C oxidase subunit IIa, transmembrane domain Alide_3608 IPR008972 Cupredoxin Alide_3609 IPR033943 Ba3-like heme-copper oxidase subunit I Alide_3609 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site Alide_3609 IPR023616 Cytochrome c oxidase-like, subunit I domain Alide_3609 IPR036927 Cytochrome c oxidase-like, subunit I superfamily Alide_3609 IPR000883 Cytochrome c oxidase subunit I Alide_3610 IPR030470 UbiA prenyltransferase conserved site Alide_3610 IPR006369 Protohaem IX farnesyltransferase Alide_3610 IPR000537 UbiA prenyltransferase family Alide_3614 IPR036927 Cytochrome c oxidase-like, subunit I superfamily Alide_3614 IPR000883 Cytochrome c oxidase subunit I Alide_3615 IPR017927 FAD-binding domain, ferredoxin reductase-type Alide_3615 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Alide_3615 IPR036010 2Fe-2S ferredoxin-like superfamily Alide_3615 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Alide_3615 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Alide_3615 IPR001433 Oxidoreductase FAD/NAD(P)-binding Alide_3615 IPR012675 Beta-grasp domain superfamily Alide_3615 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Alide_3615 IPR017938 Riboflavin synthase-like beta-barrel Alide_3616 IPR027379 Cardiolipin synthase N-terminal Alide_3616 IPR030840 Cardiolipin synthase A Alide_3616 IPR001736 Phospholipase D/Transphosphatidylase Alide_3616 IPR022924 Cardiolipin synthase Alide_3616 IPR025202 Phospholipase D-like domain Alide_3617 IPR013727 Two-component sensor kinase, N-terminal Alide_3617 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_3617 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_3617 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_3617 IPR003594 Histidine kinase/HSP90-like ATPase Alide_3617 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_3617 IPR005467 Histidine kinase domain Alide_3618 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3618 IPR001789 Signal transduction response regulator, receiver domain Alide_3618 IPR011006 CheY-like superfamily Alide_3618 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_3618 IPR016032 Signal transduction response regulator, C-terminal effector Alide_3618 IPR039420 Transcriptional regulatory protein WalR-like Alide_3619 IPR001940 Peptidase S1C Alide_3619 IPR009003 Peptidase S1, PA clan Alide_3619 IPR001478 PDZ domain Alide_3619 IPR036034 PDZ superfamily Alide_3619 IPR011782 Peptidase S1C, Do Alide_3620 IPR006659 Arsenate reductase Alide_3620 IPR006660 Arsenate reductase-like Alide_3620 IPR036249 Thioredoxin-like superfamily Alide_3621 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_3621 IPR035906 MetI-like superfamily Alide_3622 IPR003593 AAA+ ATPase domain Alide_3622 IPR013611 Transport-associated OB, type 2 Alide_3622 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3622 IPR008995 Molybdate/tungstate binding, C-terminal Alide_3622 IPR015853 ABC transporter, ferric cation import, FbpC Alide_3622 IPR017871 ABC transporter, conserved site Alide_3622 IPR003439 ABC transporter-like Alide_3623 IPR002123 Phospholipid/glycerol acyltransferase Alide_3623 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase Alide_3624 IPR032466 Metal-dependent hydrolase Alide_3624 IPR004722 Dihydroorotase Alide_3624 IPR006680 Amidohydrolase-related Alide_3624 IPR011059 Metal-dependent hydrolase, composite domain superfamily Alide_3625 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding Alide_3625 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain Alide_3625 IPR002082 Aspartate carbamoyltransferase Alide_3625 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily Alide_3625 IPR006130 Aspartate/ornithine carbamoyltransferase Alide_3626 IPR000836 Phosphoribosyltransferase domain Alide_3626 IPR023050 Bifunctional protein PyrR Alide_3626 IPR029057 Phosphoribosyltransferase-like Alide_3627 IPR037027 YqgF/RNase H-like domain superfamily Alide_3627 IPR005227 Putative pre-16S rRNA nuclease Alide_3627 IPR012337 Ribonuclease H-like superfamily Alide_3627 IPR006641 YqgF/RNase H-like domain Alide_3628 IPR003774 Protein of unknown function UPF0301 Alide_3629 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_3629 IPR036641 HPT domain superfamily Alide_3629 IPR005467 Histidine kinase domain Alide_3629 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_3629 IPR036061 CheW-like domain superfamily Alide_3629 IPR002545 CheW-like domain Alide_3629 IPR011006 CheY-like superfamily Alide_3629 IPR001789 Signal transduction response regulator, receiver domain Alide_3629 IPR003594 Histidine kinase/HSP90-like ATPase Alide_3629 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Alide_3630 IPR003660 HAMP domain Alide_3630 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Alide_3630 IPR029095 NarX-like, N-terminal Alide_3630 IPR004090 Chemotaxis methyl-accepting receptor Alide_3632 IPR001789 Signal transduction response regulator, receiver domain Alide_3632 IPR011006 CheY-like superfamily Alide_3633 IPR011006 CheY-like superfamily Alide_3633 IPR001789 Signal transduction response regulator, receiver domain Alide_3634 IPR024934 Rubredoxin-like domain Alide_3634 IPR024935 Rubredoxin domain Alide_3634 IPR018527 Rubredoxin, iron-binding site Alide_3634 IPR024922 Rubredoxin Alide_3636 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_3636 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase Alide_3636 IPR005814 Aminotransferase class-III Alide_3636 IPR015424 Pyridoxal phosphate-dependent transferase Alide_3636 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_3637 IPR002695 Bifunctional purine biosynthesis protein PurH-like Alide_3637 IPR036914 Methylglyoxal synthase-like domain superfamily Alide_3637 IPR011607 Methylglyoxal synthase-like domain Alide_3637 IPR024051 AICAR transformylase, duplicated domain superfamily Alide_3637 IPR016193 Cytidine deaminase-like Alide_3638 IPR002197 DNA binding HTH domain, Fis-type Alide_3638 IPR005412 DNA-binding protein Fis Alide_3638 IPR009057 Homeobox-like domain superfamily Alide_3639 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal Alide_3639 IPR032887 tRNA-dihydrouridine synthase B Alide_3639 IPR001269 tRNA-dihydrouridine synthase Alide_3639 IPR018517 tRNA-dihydrouridine synthase, conserved site Alide_3639 IPR035587 DUS-like, FMN-binding domain Alide_3639 IPR013785 Aldolase-type TIM barrel Alide_3639 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 Alide_3640 IPR032816 SNARE associated Golgi protein Alide_3641 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3641 IPR000847 Transcription regulator HTH, LysR Alide_3641 IPR005119 LysR, substrate-binding Alide_3641 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain Alide_3641 IPR036390 Winged helix DNA-binding domain superfamily Alide_3642 IPR005064 Bordetella uptake gene Alide_3642 IPR042100 Bordetella uptake gene, domain 1 Alide_3643 IPR002933 Peptidase M20 Alide_3643 IPR036264 Bacterial exopeptidase dimerisation domain Alide_3643 IPR017439 Amidohydrolase Alide_3643 IPR017145 Aminobenzoyl-glutamate utilization protein B Alide_3644 IPR002823 Protein of unknown function DUF112, transmembrane Alide_3645 IPR009936 Protein of unknown function DUF1468 Alide_3646 IPR003660 HAMP domain Alide_3646 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_3646 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_3646 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_3646 IPR003594 Histidine kinase/HSP90-like ATPase Alide_3646 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_3646 IPR005467 Histidine kinase domain Alide_3647 IPR011006 CheY-like superfamily Alide_3647 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_3647 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response Alide_3647 IPR039420 Transcriptional regulatory protein WalR-like Alide_3647 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3647 IPR001789 Signal transduction response regulator, receiver domain Alide_3648 IPR013029 YchF, C-terminal domain Alide_3648 IPR023192 TGS-like domain superfamily Alide_3648 IPR012676 TGS-like Alide_3648 IPR004095 TGS Alide_3648 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3648 IPR006073 GTP binding domain Alide_3648 IPR031167 OBG-type guanine nucleotide-binding (G) domain Alide_3648 IPR012675 Beta-grasp domain superfamily Alide_3648 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 Alide_3648 IPR041706 YchF, N-terminal Alide_3649 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_3649 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site Alide_3649 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 Alide_3649 IPR002938 FAD-binding domain Alide_3650 IPR033954 Disulphide bond isomerase, DsbC/G Alide_3650 IPR036249 Thioredoxin-like superfamily Alide_3650 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal Alide_3650 IPR012336 Thioredoxin-like fold Alide_3650 IPR017937 Thioredoxin, conserved site Alide_3652 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_3652 IPR029045 ClpP/crotonase-like domain superfamily Alide_3652 IPR001753 Enoyl-CoA hydratase/isomerase Alide_3652 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_3654 IPR002792 TRAM domain Alide_3654 IPR006638 Elp3/MiaB/NifB Alide_3654 IPR007197 Radical SAM Alide_3654 IPR023404 Radical SAM, alpha/beta horseshoe Alide_3654 IPR013848 Methylthiotransferase, N-terminal Alide_3654 IPR038135 Methylthiotransferase, N-terminal domain superfamily Alide_3654 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB Alide_3654 IPR005839 Methylthiotransferase Alide_3654 IPR020612 Methylthiotransferase, conserved site Alide_3655 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Alide_3655 IPR004780 Signal recognition particle protein Alide_3655 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily Alide_3655 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily Alide_3655 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3655 IPR013822 Signal recognition particle SRP54, helical bundle Alide_3655 IPR004125 Signal recognition particle, SRP54 subunit, M-domain Alide_3655 IPR022941 Signal recognition particle, SRP54 subunit Alide_3655 IPR003593 AAA+ ATPase domain Alide_3656 IPR017562 Cytochrome c-type biogenesis protein CcsA Alide_3656 IPR002541 Cytochrome c assembly protein Alide_3658 IPR000014 PAS domain Alide_3658 IPR003594 Histidine kinase/HSP90-like ATPase Alide_3658 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_3658 IPR005467 Histidine kinase domain Alide_3658 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_3658 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_3658 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_3659 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Alide_3659 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3659 IPR011006 CheY-like superfamily Alide_3659 IPR003593 AAA+ ATPase domain Alide_3659 IPR002197 DNA binding HTH domain, Fis-type Alide_3659 IPR001789 Signal transduction response regulator, receiver domain Alide_3659 IPR025944 Sigma-54 interaction domain, conserved site Alide_3659 IPR002078 RNA polymerase sigma factor 54 interaction domain Alide_3659 IPR009057 Homeobox-like domain superfamily Alide_3659 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Alide_3660 IPR002502 N-acetylmuramoyl-L-alanine amidase domain Alide_3660 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily Alide_3661 IPR005144 ATP-cone domain Alide_3661 IPR013346 Ribonucleotide reductase, class I , alpha subunit Alide_3661 IPR000788 Ribonucleotide reductase large subunit, C-terminal Alide_3661 IPR039718 Ribonucleoside-diphosphate reductase large subunit Alide_3661 IPR013509 Ribonucleotide reductase large subunit, N-terminal Alide_3661 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal Alide_3662 IPR033909 Ribonucleotide reductase small subunit Alide_3662 IPR012348 Ribonucleotide reductase-like Alide_3662 IPR009078 Ferritin-like superfamily Alide_3662 IPR000358 Ribonucleotide reductase small subunit family Alide_3664 IPR029056 Ribokinase-like Alide_3664 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Alide_3664 IPR011611 Carbohydrate kinase PfkB Alide_3666 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_3666 IPR004498 Ribosomal protein L11 methyltransferase Alide_3667 IPR016185 Pre-ATP-grasp domain superfamily Alide_3667 IPR005481 Biotin carboxylase-like, N-terminal domain Alide_3667 IPR013815 ATP-grasp fold, subdomain 1 Alide_3667 IPR011761 ATP-grasp fold Alide_3667 IPR011054 Rudiment single hybrid motif Alide_3667 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase Alide_3667 IPR011764 Biotin carboxylation domain Alide_3667 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Alide_3667 IPR005482 Biotin carboxylase, C-terminal Alide_3668 IPR001249 Acetyl-CoA biotin carboxyl carrier Alide_3668 IPR001882 Biotin-binding site Alide_3668 IPR000089 Biotin/lipoyl attachment Alide_3668 IPR011053 Single hybrid motif Alide_3669 IPR013766 Thioredoxin domain Alide_3669 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Alide_3669 IPR036249 Thioredoxin-like superfamily Alide_3671 IPR036565 Mur-like, catalytic domain superfamily Alide_3671 IPR004101 Mur ligase, C-terminal Alide_3671 IPR036615 Mur ligase, C-terminal domain superfamily Alide_3671 IPR013221 Mur ligase, central Alide_3671 IPR005757 Murein peptide ligase Alide_3671 IPR000713 Mur ligase, N-terminal catalytic domain Alide_3673 IPR013785 Aldolase-type TIM barrel Alide_3673 IPR006218 DAHP synthetase I/KDSA Alide_3673 IPR006219 DHAP synthase, class 1 Alide_3674 IPR002510 Metalloprotease TldD/PmbA Alide_3674 IPR035068 Metalloprotease TldD/PmbA, N-terminal Alide_3674 IPR036059 Metalloprotease TldD/PmbA superfamily Alide_3674 IPR025502 TldD Alide_3675 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA Alide_3675 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB Alide_3675 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site Alide_3676 IPR029058 Alpha/Beta hydrolase fold Alide_3676 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA Alide_3678 IPR036909 Cytochrome c-like domain superfamily Alide_3678 IPR002327 Cytochrome c, class IA/ IB Alide_3678 IPR009056 Cytochrome c-like domain Alide_3680 IPR014294 RNA polymerase sigma-W, bacillaceae Alide_3680 IPR039425 RNA polymerase sigma-70 like Alide_3680 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3680 IPR014284 RNA polymerase sigma-70 like domain Alide_3680 IPR013324 RNA polymerase sigma factor, region 3/4-like Alide_3680 IPR013325 RNA polymerase sigma factor, region 2 Alide_3680 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Alide_3680 IPR007627 RNA polymerase sigma-70 region 2 Alide_3680 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Alide_3681 IPR012340 Nucleic acid-binding, OB-fold Alide_3681 IPR001900 Ribonuclease II/R Alide_3683 IPR036291 NAD(P)-binding domain superfamily Alide_3683 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Alide_3683 IPR041121 SDH, C-terminal Alide_3683 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal Alide_3683 IPR011342 Shikimate dehydrogenase Alide_3683 IPR022893 Shikimate dehydrogenase family Alide_3684 IPR036950 Penicillin binding protein transglycosylase domain Alide_3684 IPR001264 Glycosyl transferase, family 51 Alide_3684 IPR011812 Biosynthetic peptidoglycan transglycosylase Alide_3684 IPR023346 Lysozyme-like domain superfamily Alide_3686 IPR001584 Integrase, catalytic core Alide_3686 IPR025948 HTH-like domain Alide_3686 IPR036397 Ribonuclease H superfamily Alide_3686 IPR012337 Ribonuclease H-like superfamily Alide_3687 IPR002514 Transposase IS3/IS911family Alide_3687 IPR009057 Homeobox-like domain superfamily Alide_3688 IPR012337 Ribonuclease H-like superfamily Alide_3688 IPR036397 Ribonuclease H superfamily Alide_3688 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site Alide_3688 IPR002176 Crossover junction endodeoxyribonuclease RuvC Alide_3690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_3690 IPR013216 Methyltransferase type 11 Alide_3691 IPR037509 Phosphomethylpyrimidine synthase Alide_3691 IPR025747 ThiC-associated domain Alide_3691 IPR038521 ThiC/Bza superfamily Alide_3691 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B Alide_3693 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal Alide_3693 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_3693 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal Alide_3693 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase Alide_3696 IPR000873 AMP-dependent synthetase/ligase Alide_3696 IPR042099 AMP-dependent synthetase-like superfamily Alide_3696 IPR020845 AMP-binding, conserved site Alide_3696 IPR025110 AMP-binding enzyme, C-terminal domain Alide_3697 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_3697 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Alide_3697 IPR036291 NAD(P)-binding domain superfamily Alide_3697 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_3699 IPR042100 Bordetella uptake gene, domain 1 Alide_3699 IPR005064 Bordetella uptake gene Alide_3699 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_3700 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_3700 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3700 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3700 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3700 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3700 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3700 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3701 IPR020805 Cell division protein FtsZ, conserved site Alide_3701 IPR024757 Cell division protein FtsZ, C-terminal Alide_3701 IPR008280 Tubulin/FtsZ, C-terminal Alide_3701 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Alide_3701 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Alide_3701 IPR003008 Tubulin/FtsZ, GTPase domain Alide_3701 IPR000158 Cell division protein FtsZ Alide_3702 IPR020823 Cell division protein FtsA Alide_3702 IPR003494 SHS2 domain inserted in FtsA Alide_3703 IPR013685 POTRA domain, FtsQ-type Alide_3703 IPR034746 POTRA domain Alide_3703 IPR026579 Cell division protein FtsQ Alide_3703 IPR005548 Cell division protein FtsQ/DivIB Alide_3704 IPR005905 D-alanine--D-alanine ligase Alide_3704 IPR011761 ATP-grasp fold Alide_3704 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site Alide_3704 IPR011095 D-alanine--D-alanine ligase, C-terminal Alide_3704 IPR011127 D-alanine--D-alanine ligase, N-terminal domain Alide_3704 IPR016185 Pre-ATP-grasp domain superfamily Alide_3704 IPR013815 ATP-grasp fold, subdomain 1 Alide_3705 IPR005758 UDP-N-acetylmuramate--L-alanine ligase Alide_3705 IPR000713 Mur ligase, N-terminal catalytic domain Alide_3705 IPR013221 Mur ligase, central Alide_3705 IPR036615 Mur ligase, C-terminal domain superfamily Alide_3705 IPR004101 Mur ligase, C-terminal Alide_3705 IPR036565 Mur-like, catalytic domain superfamily Alide_3706 IPR004276 Glycosyltransferase family 28, N-terminal domain Alide_3706 IPR007235 Glycosyl transferase, family 28, C-terminal Alide_3706 IPR006009 N-acetylglucosaminyltransferase, MurG Alide_3707 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA Alide_3707 IPR013437 Probable peptidoglycan glycosyltransferase FtsW Alide_3708 IPR013221 Mur ligase, central Alide_3708 IPR018109 Folylpolyglutamate synthetase, conserved site Alide_3708 IPR036565 Mur-like, catalytic domain superfamily Alide_3708 IPR004101 Mur ligase, C-terminal Alide_3708 IPR036615 Mur ligase, C-terminal domain superfamily Alide_3708 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase Alide_3709 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site Alide_3709 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase Alide_3709 IPR000715 Glycosyl transferase, family 4 Alide_3710 IPR035911 MurE/MurF, N-terminal Alide_3710 IPR013221 Mur ligase, central Alide_3710 IPR036615 Mur ligase, C-terminal domain superfamily Alide_3710 IPR000713 Mur ligase, N-terminal catalytic domain Alide_3710 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Alide_3710 IPR036565 Mur-like, catalytic domain superfamily Alide_3710 IPR004101 Mur ligase, C-terminal Alide_3711 IPR036615 Mur ligase, C-terminal domain superfamily Alide_3711 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase Alide_3711 IPR036565 Mur-like, catalytic domain superfamily Alide_3711 IPR004101 Mur ligase, C-terminal Alide_3711 IPR013221 Mur ligase, central Alide_3711 IPR035911 MurE/MurF, N-terminal Alide_3712 IPR037532 Peptidoglycan D,D-transpeptidase FtsI Alide_3712 IPR001460 Penicillin-binding protein, transpeptidase Alide_3712 IPR036138 Penicillin-binding protein, dimerisation domain superfamily Alide_3712 IPR005311 Penicillin-binding protein, dimerisation domain Alide_3712 IPR012338 Beta-lactamase/transpeptidase-like Alide_3714 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_3714 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily Alide_3714 IPR002903 Ribosomal RNA small subunit methyltransferase H Alide_3715 IPR035644 MraZ, C-terminal Alide_3715 IPR003444 Transcriptional regulator MraZ Alide_3715 IPR038619 MraZ superfamily Alide_3715 IPR035642 MraZ, N-terminal Alide_3715 IPR020603 MraZ domain Alide_3715 IPR037914 SpoVT-AbrB domain superfamily Alide_3715 IPR007159 SpoVT-AbrB domain Alide_3716 IPR004491 Heat shock protein HslU Alide_3716 IPR019489 Clp ATPase, C-terminal Alide_3716 IPR003959 ATPase, AAA-type, core Alide_3716 IPR003593 AAA+ ATPase domain Alide_3716 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3717 IPR001353 Proteasome, subunit alpha/beta Alide_3717 IPR023333 Proteasome B-type subunit Alide_3717 IPR029055 Nucleophile aminohydrolases, N-terminal Alide_3717 IPR022281 ATP-dependent protease, HslV subunit Alide_3719 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Alide_3719 IPR037187 DksA, N-terminal domain superfamily Alide_3719 IPR012784 RNA polymerase-binding transcription factor DksA Alide_3719 IPR000962 Zinc finger, DksA/TraR C4-type Alide_3720 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3720 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Alide_3720 IPR036627 CobW-like, C-terminal domain superfamily Alide_3720 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Alide_3721 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3721 IPR002078 RNA polymerase sigma factor 54 interaction domain Alide_3721 IPR001789 Signal transduction response regulator, receiver domain Alide_3721 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Alide_3721 IPR002197 DNA binding HTH domain, Fis-type Alide_3721 IPR025944 Sigma-54 interaction domain, conserved site Alide_3721 IPR011006 CheY-like superfamily Alide_3721 IPR003593 AAA+ ATPase domain Alide_3721 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Alide_3721 IPR009057 Homeobox-like domain superfamily Alide_3722 IPR011006 CheY-like superfamily Alide_3722 IPR035909 Methylesterase CheB, C-terminal Alide_3722 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Alide_3722 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Alide_3722 IPR001789 Signal transduction response regulator, receiver domain Alide_3723 IPR001789 Signal transduction response regulator, receiver domain Alide_3723 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_3723 IPR011006 CheY-like superfamily Alide_3723 IPR039420 Transcriptional regulatory protein WalR-like Alide_3723 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3725 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Alide_3725 IPR001789 Signal transduction response regulator, receiver domain Alide_3725 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Alide_3725 IPR035909 Methylesterase CheB, C-terminal Alide_3725 IPR011006 CheY-like superfamily Alide_3726 IPR011006 CheY-like superfamily Alide_3726 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_3726 IPR001789 Signal transduction response regulator, receiver domain Alide_3726 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3726 IPR039420 Transcriptional regulatory protein WalR-like Alide_3727 IPR021800 Domain of unknown function DUF3369 Alide_3727 IPR001789 Signal transduction response regulator, receiver domain Alide_3727 IPR037522 HD-GYP domain Alide_3727 IPR011006 CheY-like superfamily Alide_3727 IPR003607 HD/PDEase domain Alide_3729 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_3729 IPR005467 Histidine kinase domain Alide_3729 IPR036641 HPT domain superfamily Alide_3729 IPR003594 Histidine kinase/HSP90-like ATPase Alide_3729 IPR003660 HAMP domain Alide_3729 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_3729 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_3729 IPR011006 CheY-like superfamily Alide_3729 IPR019247 Histidine kinase BarA, N-terminal Alide_3729 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Alide_3729 IPR001789 Signal transduction response regulator, receiver domain Alide_3729 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_3730 IPR003660 HAMP domain Alide_3730 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Alide_3730 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Alide_3730 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Alide_3730 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Alide_3730 IPR004090 Chemotaxis methyl-accepting receptor Alide_3731 IPR011010 DNA breaking-rejoining enzyme, catalytic core Alide_3731 IPR002104 Integrase, catalytic domain Alide_3731 IPR010998 Integrase/recombinase, N-terminal Alide_3731 IPR013762 Integrase-like, catalytic domain superfamily Alide_3731 IPR004107 Integrase, SAM-like, N-terminal Alide_3731 IPR011931 Tyrosine recombinase XerC Alide_3731 IPR023009 Tyrosine recombinase XerC/XerD Alide_3733 IPR018510 Diaminopimelate epimerase, active site Alide_3733 IPR001653 Diaminopimelate epimerase, DapF Alide_3735 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain Alide_3735 IPR036986 RNA-binding S4 domain superfamily Alide_3735 IPR020103 Pseudouridine synthase, catalytic domain superfamily Alide_3735 IPR006145 Pseudouridine synthase, RsuA/RluA Alide_3735 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Alide_3735 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Alide_3735 IPR002942 RNA-binding S4 domain Alide_3737 IPR005856 Cysteine synthase Alide_3737 IPR005859 Cysteine synthase CysK Alide_3737 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Alide_3737 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site Alide_3737 IPR001926 Pyridoxal-phosphate dependent enzyme Alide_3739 IPR028348 FAD dependent protein Alide_3739 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_3741 IPR036390 Winged helix DNA-binding domain superfamily Alide_3741 IPR000847 Transcription regulator HTH, LysR Alide_3741 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3741 IPR005119 LysR, substrate-binding Alide_3742 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_3742 IPR006475 Citrate lyase, beta subunit, bacteria Alide_3742 IPR011206 Citrate lyase beta subunit-like Alide_3742 IPR040442 Pyruvate kinase-like domain superfamily Alide_3742 IPR005000 HpcH/HpaI aldolase/citrate lyase domain Alide_3743 IPR042100 Bordetella uptake gene, domain 1 Alide_3743 IPR005064 Bordetella uptake gene Alide_3744 IPR023606 CoA-transferase family III domain superfamily Alide_3744 IPR003673 CoA-transferase family III Alide_3745 IPR006680 Amidohydrolase-related Alide_3745 IPR032466 Metal-dependent hydrolase Alide_3746 IPR005064 Bordetella uptake gene Alide_3746 IPR042100 Bordetella uptake gene, domain 1 Alide_3747 IPR023187 Transcriptional regulator MarR-type, conserved site Alide_3747 IPR000835 MarR-type HTH domain Alide_3747 IPR036390 Winged helix DNA-binding domain superfamily Alide_3747 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3748 IPR011283 Acetoacetyl-CoA reductase Alide_3748 IPR036291 NAD(P)-binding domain superfamily Alide_3748 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_3748 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_3749 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_3749 IPR001753 Enoyl-CoA hydratase/isomerase Alide_3749 IPR029045 ClpP/crotonase-like domain superfamily Alide_3749 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB Alide_3749 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_3750 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3750 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3750 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3750 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_3750 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3750 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3750 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3751 IPR025110 AMP-binding enzyme, C-terminal domain Alide_3751 IPR020845 AMP-binding, conserved site Alide_3751 IPR000873 AMP-dependent synthetase/ligase Alide_3751 IPR042099 AMP-dependent synthetase-like superfamily Alide_3752 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Alide_3752 IPR001308 Electron transfer flavoprotein alpha subunit/FixB Alide_3752 IPR029035 DHS-like NAD/FAD-binding domain superfamily Alide_3752 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Alide_3752 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_3752 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Alide_3752 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal Alide_3753 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_3753 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Alide_3753 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal Alide_3753 IPR012255 Electron transfer flavoprotein, beta subunit Alide_3753 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site Alide_3754 IPR013785 Aldolase-type TIM barrel Alide_3754 IPR004136 Nitronate monooxygenase Alide_3755 IPR005064 Bordetella uptake gene Alide_3755 IPR042100 Bordetella uptake gene, domain 1 Alide_3756 IPR003673 CoA-transferase family III Alide_3756 IPR023606 CoA-transferase family III domain superfamily Alide_3758 IPR029045 ClpP/crotonase-like domain superfamily Alide_3758 IPR001753 Enoyl-CoA hydratase/isomerase Alide_3758 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_3758 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB Alide_3759 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3759 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3759 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3759 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3759 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3759 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3760 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3760 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3760 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3760 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3760 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3760 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3761 IPR020613 Thiolase, conserved site Alide_3761 IPR020616 Thiolase, N-terminal Alide_3761 IPR020617 Thiolase, C-terminal Alide_3761 IPR020610 Thiolase, active site Alide_3761 IPR002155 Thiolase Alide_3761 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_3761 IPR016039 Thiolase-like Alide_3762 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_3762 IPR036291 NAD(P)-binding domain superfamily Alide_3762 IPR012802 Fatty oxidation complex, alpha subunit FadJ Alide_3762 IPR001753 Enoyl-CoA hydratase/isomerase Alide_3762 IPR029045 ClpP/crotonase-like domain superfamily Alide_3762 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal Alide_3762 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding Alide_3763 IPR005119 LysR, substrate-binding Alide_3763 IPR000847 Transcription regulator HTH, LysR Alide_3763 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3763 IPR036390 Winged helix DNA-binding domain superfamily Alide_3768 IPR009057 Homeobox-like domain superfamily Alide_3768 IPR002514 Transposase IS3/IS911family Alide_3768 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3769 IPR001584 Integrase, catalytic core Alide_3769 IPR025948 HTH-like domain Alide_3769 IPR036397 Ribonuclease H superfamily Alide_3769 IPR012337 Ribonuclease H-like superfamily Alide_3770 IPR036397 Ribonuclease H superfamily Alide_3770 IPR012337 Ribonuclease H-like superfamily Alide_3770 IPR001584 Integrase, catalytic core Alide_3770 IPR025948 HTH-like domain Alide_3771 IPR009057 Homeobox-like domain superfamily Alide_3771 IPR002514 Transposase IS3/IS911family Alide_3774 IPR004291 Transposase, IS66 Alide_3774 IPR024463 Transposase TnpC, homeodomain Alide_3774 IPR024474 Zinc-finger binding domain of transposase IS66 Alide_3774 IPR039552 Transposase IS66, C-terminal Alide_3777 IPR022919 Peptidase M48, protease HtpX, putative Alide_3777 IPR001915 Peptidase M48 Alide_3779 IPR002195 Dihydroorotase, conserved site Alide_3779 IPR006680 Amidohydrolase-related Alide_3779 IPR004721 Dihydroorotase homodimeric type Alide_3779 IPR032466 Metal-dependent hydrolase Alide_3781 IPR007438 Protein of unknown function DUF488 Alide_3782 IPR004675 Alkylhydroperoxidase AhpD core Alide_3782 IPR029032 AhpD-like Alide_3782 IPR003779 Carboxymuconolactone decarboxylase-like Alide_3783 IPR017871 ABC transporter, conserved site Alide_3783 IPR041552 UvrA DNA-binding domain Alide_3783 IPR004602 UvrABC system subunit A Alide_3783 IPR041102 UvrA, interaction domain Alide_3783 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3783 IPR003593 AAA+ ATPase domain Alide_3783 IPR003439 ABC transporter-like Alide_3784 IPR028082 Periplasmic binding protein-like I Alide_3784 IPR000709 Leu/Ile/Val-binding protein Alide_3784 IPR028081 Leucine-binding protein domain Alide_3786 IPR023614 Porin domain superfamily Alide_3786 IPR002299 Porin, Neisseria sp. type Alide_3786 IPR033900 Porin domain, Gram-negative type Alide_3787 IPR004736 MFS transporter, metabolite:H symporter Alide_3787 IPR005828 Major facilitator, sugar transporter-like Alide_3787 IPR036259 MFS transporter superfamily Alide_3787 IPR005829 Sugar transporter, conserved site Alide_3787 IPR036292 Proline/betaine transporter ProP, C-terminal Alide_3787 IPR015041 Osmosensory transporter coiled coil Alide_3787 IPR020846 Major facilitator superfamily domain Alide_3789 IPR014083 Cation/acetate symporter ActP Alide_3789 IPR038377 Sodium/glucose symporter superfamily Alide_3789 IPR018212 Sodium/solute symporter, conserved site Alide_3789 IPR001734 Sodium/solute symporter Alide_3792 IPR001853 DSBA-like thioredoxin domain Alide_3792 IPR014440 HCCA isomerase/glutathione S-transferase kappa Alide_3792 IPR036249 Thioredoxin-like superfamily Alide_3795 IPR013785 Aldolase-type TIM barrel Alide_3795 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site Alide_3795 IPR000891 Pyruvate carboxyltransferase Alide_3796 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Alide_3796 IPR023514 Glyoxylate/hydroxypyruvate reductase A Alide_3796 IPR036291 NAD(P)-binding domain superfamily Alide_3796 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Alide_3797 IPR011053 Single hybrid motif Alide_3797 IPR011054 Rudiment single hybrid motif Alide_3797 IPR016185 Pre-ATP-grasp domain superfamily Alide_3797 IPR011764 Biotin carboxylation domain Alide_3797 IPR000089 Biotin/lipoyl attachment Alide_3797 IPR001882 Biotin-binding site Alide_3797 IPR005481 Biotin carboxylase-like, N-terminal domain Alide_3797 IPR011761 ATP-grasp fold Alide_3797 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Alide_3797 IPR005482 Biotin carboxylase, C-terminal Alide_3799 IPR001753 Enoyl-CoA hydratase/isomerase Alide_3799 IPR029045 ClpP/crotonase-like domain superfamily Alide_3800 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal Alide_3800 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal Alide_3800 IPR029045 ClpP/crotonase-like domain superfamily Alide_3800 IPR034733 Acetyl-CoA carboxylase Alide_3801 IPR000873 AMP-dependent synthetase/ligase Alide_3801 IPR020845 AMP-binding, conserved site Alide_3801 IPR025110 AMP-binding enzyme, C-terminal domain Alide_3804 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_3804 IPR027424 Glucose Oxidase, domain 2 Alide_3804 IPR012132 Glucose-methanol-choline oxidoreductase Alide_3804 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Alide_3804 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Alide_3804 IPR011533 Oxygen-dependent choline dehydrogenase Alide_3805 IPR000709 Leu/Ile/Val-binding protein Alide_3805 IPR028081 Leucine-binding protein domain Alide_3805 IPR028082 Periplasmic binding protein-like I Alide_3806 IPR001851 ABC transporter, permease Alide_3807 IPR017871 ABC transporter, conserved site Alide_3807 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3807 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Alide_3807 IPR003593 AAA+ ATPase domain Alide_3807 IPR003439 ABC transporter-like Alide_3808 IPR003593 AAA+ ATPase domain Alide_3808 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_3808 IPR003439 ABC transporter-like Alide_3808 IPR017871 ABC transporter, conserved site Alide_3808 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3809 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Alide_3809 IPR011533 Oxygen-dependent choline dehydrogenase Alide_3809 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Alide_3809 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_3809 IPR027424 Glucose Oxidase, domain 2 Alide_3809 IPR012132 Glucose-methanol-choline oxidoreductase Alide_3810 IPR025110 AMP-binding enzyme, C-terminal domain Alide_3810 IPR020845 AMP-binding, conserved site Alide_3810 IPR000873 AMP-dependent synthetase/ligase Alide_3810 IPR042099 AMP-dependent synthetase-like superfamily Alide_3810 IPR010192 2-succinylbenzoate--CoA ligase Alide_3811 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_3811 IPR004839 Aminotransferase, class I/classII Alide_3811 IPR015424 Pyridoxal phosphate-dependent transferase Alide_3811 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_3812 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site Alide_3812 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily Alide_3812 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type Alide_3812 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II Alide_3812 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily Alide_3812 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily Alide_3813 IPR036412 HAD-like superfamily Alide_3813 IPR006439 HAD hydrolase, subfamily IA Alide_3813 IPR041492 Haloacid dehalogenase-like hydrolase Alide_3813 IPR023214 HAD superfamily Alide_3813 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Alide_3814 IPR035919 EAL domain superfamily Alide_3814 IPR003018 GAF domain Alide_3814 IPR029016 GAF-like domain superfamily Alide_3814 IPR000160 GGDEF domain Alide_3814 IPR029787 Nucleotide cyclase Alide_3814 IPR016132 Phytochrome chromophore attachment domain Alide_3814 IPR001294 Phytochrome Alide_3814 IPR013515 Phytochrome, central region Alide_3814 IPR001633 EAL domain Alide_3815 IPR039424 Solute-binding protein family 5 Alide_3815 IPR000914 Solute-binding protein family 5 domain Alide_3815 IPR030678 Peptide/nickel binding protein, MppA-type Alide_3815 IPR023765 Solute-binding protein family 5, conserved site Alide_3817 IPR000160 GGDEF domain Alide_3817 IPR013656 PAS fold-4 Alide_3817 IPR035919 EAL domain superfamily Alide_3817 IPR001633 EAL domain Alide_3817 IPR035965 PAS domain superfamily Alide_3817 IPR000014 PAS domain Alide_3817 IPR029787 Nucleotide cyclase Alide_3818 IPR032710 NTF2-like domain superfamily Alide_3818 IPR023006 Uncharacterised protein family UPF0225 Alide_3822 IPR023172 Peptidase S51, dipeptidase E Alide_3822 IPR005320 Peptidase S51 Alide_3822 IPR029062 Class I glutamine amidotransferase-like Alide_3825 IPR005064 Bordetella uptake gene Alide_3825 IPR042100 Bordetella uptake gene, domain 1 Alide_3828 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3828 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_3828 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3828 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3828 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3828 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3828 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3830 IPR020610 Thiolase, active site Alide_3830 IPR020617 Thiolase, C-terminal Alide_3830 IPR020613 Thiolase, conserved site Alide_3830 IPR020616 Thiolase, N-terminal Alide_3830 IPR002155 Thiolase Alide_3830 IPR016039 Thiolase-like Alide_3830 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_3831 IPR010452 Isocitrate dehydrogenase kinasephosphatase Alide_3832 IPR036874 Carbonic anhydrase superfamily Alide_3832 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site Alide_3832 IPR001765 Carbonic anhydrase Alide_3833 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_3833 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_3833 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_3833 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_3833 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_3833 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_3833 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_3834 IPR009061 Putative DNA-binding domain superfamily Alide_3834 IPR011789 Cu(I)-responsive transcriptional regulator Alide_3834 IPR000551 MerR-type HTH domain Alide_3836 IPR001789 Signal transduction response regulator, receiver domain Alide_3836 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Alide_3836 IPR035909 Methylesterase CheB, C-terminal Alide_3836 IPR011006 CheY-like superfamily Alide_3836 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Alide_3837 IPR005659 Chemoreceptor glutamine deamidase CheD Alide_3837 IPR038592 CheD-like superfamily Alide_3837 IPR011324 Cytotoxic necrotizing factor-like, catalytic Alide_3838 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Alide_3838 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_3838 IPR000780 MCP methyltransferase, CheR-type Alide_3838 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Alide_3838 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Alide_3838 IPR026024 Chemotaxis protein methyltransferase CheR Alide_3839 IPR039315 Chemotaxis protein CheW Alide_3839 IPR002545 CheW-like domain Alide_3839 IPR036061 CheW-like domain superfamily Alide_3840 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_3840 IPR036641 HPT domain superfamily Alide_3840 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily Alide_3840 IPR036061 CheW-like domain superfamily Alide_3840 IPR005467 Histidine kinase domain Alide_3840 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Alide_3840 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_3840 IPR002545 CheW-like domain Alide_3840 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_3840 IPR015162 CheY binding Alide_3840 IPR004105 Histidine kinase CheA-like, homodimeric domain Alide_3840 IPR003594 Histidine kinase/HSP90-like ATPase Alide_3840 IPR035891 CheY-binding domain of CheA Alide_3841 IPR001789 Signal transduction response regulator, receiver domain Alide_3841 IPR011006 CheY-like superfamily Alide_3843 IPR005467 Histidine kinase domain Alide_3843 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Alide_3843 IPR016381 Signal transduction histidine kinase, DegS Alide_3843 IPR008595 Sensor DegS Alide_3843 IPR003594 Histidine kinase/HSP90-like ATPase Alide_3843 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_3844 IPR016032 Signal transduction response regulator, C-terminal effector Alide_3844 IPR001789 Signal transduction response regulator, receiver domain Alide_3844 IPR011006 CheY-like superfamily Alide_3844 IPR000792 Transcription regulator LuxR, C-terminal Alide_3845 IPR002010 Type III secretion system inner membrane R protein Alide_3845 IPR006303 Flagellar biosynthesis protein FliR Alide_3846 IPR002191 Bacterial export protein family 3 Alide_3846 IPR006305 Flagellar biosynthesis protein FliQ Alide_3847 IPR005837 Flagellar transport protein FliP Alide_3847 IPR005838 Type III secretion system inner membrane P protein Alide_3849 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb Alide_3849 IPR001543 Surface presentation of antigen (SpoA) Alide_3849 IPR036429 SpoA-like superfamily Alide_3849 IPR012826 Flagellar motor switch FliN Alide_3849 IPR031576 Flagellar motor switch protein FliN, N-terminal Alide_3850 IPR028976 CheC-like superfamily Alide_3850 IPR001543 Surface presentation of antigen (SpoA) Alide_3850 IPR001689 Flagellar motor switch protein FliM Alide_3850 IPR036429 SpoA-like superfamily Alide_3854 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Alide_3854 IPR032463 ATPase, type III secretion system, FliI Alide_3854 IPR005714 ATPase, type III secretion system, FliI/YscN Alide_3854 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Alide_3854 IPR003593 AAA+ ATPase domain Alide_3854 IPR040627 T3SS EscN ATPase, C-terminal Alide_3854 IPR020005 Flagellar export ATPase FliI, clade 1 Alide_3854 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3856 IPR032779 Flagellar motor switch protein FliG, middle domain Alide_3856 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Alide_3856 IPR011002 Flagellar motor switch protein FliG, alpha-helical Alide_3856 IPR000090 Flagellar motor switch protein FliG Alide_3856 IPR023087 Flagellar motor switch protein FliG, C-terminal Alide_3857 IPR013556 Flagellar M-ring C-terminal Alide_3857 IPR000067 Flagellar M-ring protein FliF Alide_3857 IPR006182 Secretory protein YscJ/FliF Alide_3861 IPR003481 Flagellar hook-associated protein 2, N-terminal Alide_3861 IPR010809 Flagellar hook-associated protein 2, C-terminal Alide_3861 IPR010810 Flagellin hook, IN motif Alide_3861 IPR040026 Flagellar hook-associated protein 2 Alide_3862 IPR001029 Flagellin, D0/D1 domain Alide_3862 IPR001492 Flagellin Alide_3863 IPR001492 Flagellin Alide_3863 IPR010810 Flagellin hook, IN motif Alide_3863 IPR001029 Flagellin, D0/D1 domain Alide_3864 IPR032719 Glycosyltransferase WbsX Alide_3864 IPR007739 Rhamnan synthesis F Alide_3865 IPR010203 Regulator of ribonuclease activity A Alide_3865 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Alide_3865 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Alide_3866 IPR000540 Flagellar motor protein MotA, conserved site Alide_3866 IPR022522 Flagellar motor stator, MotA Alide_3866 IPR002898 MotA/TolQ/ExbB proton channel Alide_3867 IPR036737 OmpA-like domain superfamily Alide_3867 IPR025713 Motility protein B, N-terminal domain Alide_3867 IPR006665 OmpA-like domain Alide_3868 IPR001789 Signal transduction response regulator, receiver domain Alide_3868 IPR011006 CheY-like superfamily Alide_3869 IPR007439 Chemotaxis phosphatase, CheZ Alide_3870 IPR029025 Type III secretion system substrate exporter, C-terminal Alide_3870 IPR006135 Type III secretion system substrate exporter Alide_3870 IPR006136 Flagellar biosynthetic protein FlhB Alide_3871 IPR042196 FHIPEP, domain 4 Alide_3871 IPR042193 FHIPEP, domain 3 Alide_3871 IPR025505 FHIPEP conserved site Alide_3871 IPR006301 Flagellar biosynthesis protein FlhA Alide_3871 IPR001712 Type III secretion system FHIPEP Alide_3871 IPR042194 FHIPEP, domain 1 Alide_3872 IPR003593 AAA+ ATPase domain Alide_3872 IPR020006 Flagellar biosynthesis protein FlhF Alide_3872 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Alide_3872 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3874 IPR007624 RNA polymerase sigma-70 region 3 Alide_3874 IPR007627 RNA polymerase sigma-70 region 2 Alide_3874 IPR000943 RNA polymerase sigma-70 Alide_3874 IPR014284 RNA polymerase sigma-70 like domain Alide_3874 IPR012845 RNA polymerase sigma factor, FliA/WhiG Alide_3874 IPR013325 RNA polymerase sigma factor, region 2 Alide_3874 IPR013324 RNA polymerase sigma factor, region 3/4-like Alide_3874 IPR028617 RNA polymerase sigma factor FliA Alide_3874 IPR007630 RNA polymerase sigma-70 region 4 Alide_3877 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Alide_3877 IPR013974 SAF domain Alide_3877 IPR039246 Flagellar protein FlgA Alide_3878 IPR006300 Flagellar basal-body rod protein FlgB Alide_3878 IPR019776 Flagellar basal body rod protein, conserved site Alide_3878 IPR001444 Flagellar basal body rod protein, N-terminal Alide_3879 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Alide_3879 IPR006299 Flagellar basal-body rod protein FlgC Alide_3879 IPR001444 Flagellar basal body rod protein, N-terminal Alide_3879 IPR019776 Flagellar basal body rod protein, conserved site Alide_3880 IPR005648 Flagellar hook capping protein Alide_3880 IPR025963 FlgD Tudor-like domain Alide_3880 IPR025965 FlgD Ig-like domain Alide_3881 IPR019776 Flagellar basal body rod protein, conserved site Alide_3881 IPR037058 Flagellar hook protein FlgE superfamily Alide_3881 IPR001444 Flagellar basal body rod protein, N-terminal Alide_3881 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Alide_3881 IPR011491 Flagellar hook protein FlgE Alide_3881 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Alide_3881 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Alide_3882 IPR001444 Flagellar basal body rod protein, N-terminal Alide_3882 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Alide_3882 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Alide_3882 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Alide_3882 IPR019776 Flagellar basal body rod protein, conserved site Alide_3883 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Alide_3883 IPR019776 Flagellar basal body rod protein, conserved site Alide_3883 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Alide_3883 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Alide_3883 IPR012834 Flagellar basal-body rod FlgG Alide_3883 IPR001444 Flagellar basal body rod protein, N-terminal Alide_3885 IPR001782 Flagellar P-ring protein Alide_3886 IPR019301 Flagellar protein FlgJ, N-terminal Alide_3886 IPR013377 Peptidoglycan hydrolase FlgJ Alide_3886 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain Alide_3888 IPR013384 Flagellar hook-associated protein 3 Alide_3888 IPR001029 Flagellin, D0/D1 domain Alide_3890 IPR013785 Aldolase-type TIM barrel Alide_3890 IPR004136 Nitronate monooxygenase Alide_3891 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_3891 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3891 IPR000524 Transcription regulator HTH, GntR Alide_3891 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_3891 IPR015424 Pyridoxal phosphate-dependent transferase Alide_3891 IPR004839 Aminotransferase, class I/classII Alide_3891 IPR036390 Winged helix DNA-binding domain superfamily Alide_3893 IPR000620 EamA domain Alide_3894 IPR015424 Pyridoxal phosphate-dependent transferase Alide_3894 IPR004839 Aminotransferase, class I/classII Alide_3894 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_3894 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_3895 IPR003719 Phenazine biosynthesis PhzF protein Alide_3896 IPR005789 Threonine dehydratase, catabolic Alide_3896 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Alide_3896 IPR001926 Pyridoxal-phosphate dependent enzyme Alide_3896 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Alide_3901 IPR001633 EAL domain Alide_3901 IPR035919 EAL domain superfamily Alide_3901 IPR003018 GAF domain Alide_3901 IPR029016 GAF-like domain superfamily Alide_3901 IPR001294 Phytochrome Alide_3901 IPR013515 Phytochrome, central region Alide_3901 IPR029787 Nucleotide cyclase Alide_3901 IPR016132 Phytochrome chromophore attachment domain Alide_3901 IPR000160 GGDEF domain Alide_3905 IPR024087 Creatininase-like superfamily Alide_3905 IPR003785 Creatininase/formamide hydrolase Alide_3905 IPR023871 Mycofactocin system creatininase family protein Alide_3906 IPR042100 Bordetella uptake gene, domain 1 Alide_3906 IPR005064 Bordetella uptake gene Alide_3908 IPR036249 Thioredoxin-like superfamily Alide_3908 IPR023555 Thiol-disulphide oxidoreductase ResA Alide_3908 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Alide_3908 IPR013766 Thioredoxin domain Alide_3908 IPR017937 Thioredoxin, conserved site Alide_3911 IPR000257 Uroporphyrinogen decarboxylase (URO-D) Alide_3911 IPR006361 Uroporphyrinogen decarboxylase HemE Alide_3911 IPR038071 UROD/MetE-like superfamily Alide_3912 IPR011545 DEAD/DEAH box helicase domain Alide_3912 IPR014001 Helicase superfamily 1/2, ATP-binding domain Alide_3912 IPR001650 Helicase, C-terminal Alide_3912 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3912 IPR005259 Primosomal protein N' Alide_3912 IPR041236 Primosomal protein N, C-terminal domain Alide_3912 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain Alide_3912 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily Alide_3912 IPR041222 Primosomal protein N', 3' DNA-binding domain Alide_3913 IPR002155 Thiolase Alide_3913 IPR020610 Thiolase, active site Alide_3913 IPR020617 Thiolase, C-terminal Alide_3913 IPR020616 Thiolase, N-terminal Alide_3913 IPR016039 Thiolase-like Alide_3913 IPR020615 Thiolase, acyl-enzyme intermediate active site Alide_3914 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_3914 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB Alide_3914 IPR029045 ClpP/crotonase-like domain superfamily Alide_3914 IPR001753 Enoyl-CoA hydratase/isomerase Alide_3917 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3917 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_3917 IPR017871 ABC transporter, conserved site Alide_3917 IPR003593 AAA+ ATPase domain Alide_3917 IPR003439 ABC transporter-like Alide_3921 IPR003439 ABC transporter-like Alide_3921 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3921 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Alide_3921 IPR003593 AAA+ ATPase domain Alide_3921 IPR017871 ABC transporter, conserved site Alide_3923 IPR004776 Membrane transport protein Alide_3924 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3924 IPR005752 ATP-dependent DNA helicase Rep Alide_3924 IPR014016 UvrD-like helicase, ATP-binding domain Alide_3924 IPR014017 UvrD-like DNA helicase, C-terminal Alide_3924 IPR034739 UvrD/AddA helicase, N-terminal Alide_3924 IPR013986 DExx box DNA helicase domain superfamily Alide_3924 IPR000212 DNA helicase, UvrD/REP type Alide_3926 IPR036541 Phospholipase A1 superfamily Alide_3926 IPR003187 Phospholipase A1 Alide_3927 IPR016187 C-type lectin fold Alide_3927 IPR005532 Sulfatase-modifying factor enzyme Alide_3927 IPR042095 Sulfatase-modifying factor enzyme superfamily Alide_3928 IPR017850 Alkaline-phosphatase-like, core domain superfamily Alide_3928 IPR024607 Sulfatase, conserved site Alide_3928 IPR000917 Sulfatase, N-terminal Alide_3929 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Alide_3929 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Alide_3929 IPR037523 Vicinal oxygen chelate (VOC) domain Alide_3929 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II Alide_3930 IPR002938 FAD-binding domain Alide_3930 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_3931 IPR011234 Fumarylacetoacetase-like, C-terminal Alide_3931 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily Alide_3932 IPR033900 Porin domain, Gram-negative type Alide_3932 IPR023614 Porin domain superfamily Alide_3932 IPR002299 Porin, Neisseria sp. type Alide_3933 IPR008920 Transcription regulator FadR/GntR, C-terminal Alide_3933 IPR011711 GntR, C-terminal Alide_3933 IPR000524 Transcription regulator HTH, GntR Alide_3933 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3933 IPR036390 Winged helix DNA-binding domain superfamily Alide_3935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_3935 IPR006015 Universal stress protein A family Alide_3935 IPR006016 UspA Alide_3936 IPR036511 Queuine tRNA-ribosyltransferase-like Alide_3936 IPR004803 tRNA-guanine transglycosylase Alide_3936 IPR002616 tRNA-guanine(15) transglycosylase-like Alide_3940 IPR042100 Bordetella uptake gene, domain 1 Alide_3940 IPR005064 Bordetella uptake gene Alide_3941 IPR042100 Bordetella uptake gene, domain 1 Alide_3941 IPR005064 Bordetella uptake gene Alide_3942 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Alide_3942 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Alide_3944 IPR023775 Bifunctional protein Aas Alide_3944 IPR020845 AMP-binding, conserved site Alide_3944 IPR002123 Phospholipid/glycerol acyltransferase Alide_3944 IPR000873 AMP-dependent synthetase/ligase Alide_3944 IPR042099 AMP-dependent synthetase-like superfamily Alide_3945 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3945 IPR003593 AAA+ ATPase domain Alide_3945 IPR037219 Peptidase M41-like Alide_3945 IPR000642 Peptidase M41 Alide_3945 IPR003959 ATPase, AAA-type, core Alide_3945 IPR003960 ATPase, AAA-type, conserved site Alide_3945 IPR005936 Peptidase, FtsH Alide_3945 IPR011546 Peptidase M41, FtsH extracellular Alide_3945 IPR041569 AAA ATPase, AAA+ lid domain Alide_3946 IPR029057 Phosphoribosyltransferase-like Alide_3946 IPR000836 Phosphoribosyltransferase domain Alide_3946 IPR023050 Bifunctional protein PyrR Alide_3947 IPR029058 Alpha/Beta hydrolase fold Alide_3947 IPR029057 Phosphoribosyltransferase-like Alide_3947 IPR000836 Phosphoribosyltransferase domain Alide_3947 IPR002925 Dienelactone hydrolase Alide_3948 IPR029057 Phosphoribosyltransferase-like Alide_3948 IPR000836 Phosphoribosyltransferase domain Alide_3948 IPR002925 Dienelactone hydrolase Alide_3948 IPR029058 Alpha/Beta hydrolase fold Alide_3949 IPR013154 Alcohol dehydrogenase, N-terminal Alide_3949 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site Alide_3949 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 Alide_3949 IPR011032 GroES-like superfamily Alide_3949 IPR036291 NAD(P)-binding domain superfamily Alide_3950 IPR042100 Bordetella uptake gene, domain 1 Alide_3950 IPR005064 Bordetella uptake gene Alide_3951 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain Alide_3951 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_3956 IPR000387 Tyrosine specific protein phosphatases domain Alide_3956 IPR016130 Protein-tyrosine phosphatase, active site Alide_3956 IPR026893 Tyrosine/serine-protein phosphatase IphP-type Alide_3956 IPR029021 Protein-tyrosine phosphatase-like Alide_3957 IPR000456 Ribosomal protein L17 Alide_3957 IPR036373 Ribosomal protein L17 superfamily Alide_3958 IPR011262 DNA-directed RNA polymerase, insert domain Alide_3958 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type Alide_3958 IPR011773 DNA-directed RNA polymerase, alpha subunit Alide_3958 IPR036603 RNA polymerase, RBP11-like subunit Alide_3958 IPR011260 RNA polymerase, alpha subunit, C-terminal Alide_3958 IPR036643 DNA-directed RNA polymerase, insert domain superfamily Alide_3959 IPR022801 Ribosomal protein S4/S9 Alide_3959 IPR036986 RNA-binding S4 domain superfamily Alide_3959 IPR005709 Ribosomal protein S4, bacterial-type Alide_3959 IPR002942 RNA-binding S4 domain Alide_3959 IPR001912 Ribosomal protein S4/S9, N-terminal Alide_3959 IPR018079 Ribosomal protein S4, conserved site Alide_3960 IPR036967 Ribosomal protein S11 superfamily Alide_3960 IPR018102 Ribosomal S11, conserved site Alide_3960 IPR019981 Ribosomal protein S11, bacterial-type Alide_3960 IPR001971 Ribosomal protein S11 Alide_3961 IPR018269 Ribosomal protein S13, conserved site Alide_3961 IPR019980 Ribosomal protein S13, bacterial-type Alide_3961 IPR027437 30s ribosomal protein S13, C-terminal Alide_3961 IPR001892 Ribosomal protein S13 Alide_3961 IPR010979 Ribosomal protein S13-like, H2TH Alide_3962 IPR000473 Ribosomal protein L36 Alide_3962 IPR035977 Ribosomal protein L36 superfamily Alide_3963 IPR023201 SecY domain superfamily Alide_3963 IPR002208 SecY/SEC61-alpha family Alide_3963 IPR026593 Protein translocase subunit SecY Alide_3963 IPR030659 SecY conserved site Alide_3964 IPR021131 Ribosomal protein L18e/L15P Alide_3964 IPR030878 Ribosomal protein L15 Alide_3964 IPR036227 Ribosomal L18e/L15P superfamily Alide_3964 IPR005749 Ribosomal protein L15, bacterial-type Alide_3965 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Alide_3965 IPR005996 Ribosomal protein L30, bacterial-type Alide_3965 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Alide_3966 IPR005712 Ribosomal protein S5, bacterial-type Alide_3966 IPR000851 Ribosomal protein S5 Alide_3966 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_3966 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Alide_3966 IPR013810 Ribosomal protein S5, N-terminal Alide_3966 IPR018192 Ribosomal protein S5, N-terminal, conserved site Alide_3966 IPR005324 Ribosomal protein S5, C-terminal Alide_3967 IPR004389 Ribosomal protein L18, bacterial-type Alide_3967 IPR005484 Ribosomal protein L18 Alide_3968 IPR019906 Ribosomal protein L6, bacterial-type Alide_3968 IPR002358 Ribosomal protein L6, conserved site Alide_3968 IPR000702 Ribosomal protein L6 Alide_3968 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily Alide_3968 IPR020040 Ribosomal protein L6, alpha-beta domain Alide_3969 IPR000630 Ribosomal protein S8 Alide_3969 IPR035987 Ribosomal protein S8 superfamily Alide_3970 IPR023036 Ribosomal protein S14, bacterial/plastid Alide_3970 IPR001209 Ribosomal protein S14 Alide_3971 IPR002132 Ribosomal protein L5 Alide_3971 IPR022803 Ribosomal protein L5 domain superfamily Alide_3971 IPR031309 Ribosomal protein L5, C-terminal Alide_3971 IPR020929 Ribosomal protein L5, conserved site Alide_3971 IPR031310 Ribosomal protein L5, N-terminal Alide_3971 IPR020930 Ribosomal protein L5, bacterial-type Alide_3972 IPR041988 Ribosomal Protein L26/L24, KOW domain Alide_3972 IPR003256 Ribosomal protein L24 Alide_3972 IPR005824 KOW Alide_3972 IPR014722 Ribosomal protein L2, domain 2 Alide_3972 IPR005825 Ribosomal protein L24/L26, conserved site Alide_3972 IPR008991 Translation protein SH3-like domain superfamily Alide_3973 IPR036853 Ribosomal protein L14 superfamily Alide_3973 IPR005745 Ribosomal protein L14P, bacterial-type Alide_3973 IPR000218 Ribosomal protein L14P Alide_3973 IPR019972 Ribosomal protein L14P, conserved site Alide_3974 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase Alide_3974 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_3974 IPR006076 FAD dependent oxidoreductase Alide_3974 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily Alide_3974 IPR031656 Alpha-glycerophosphate oxidase, C-terminal Alide_3975 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3975 IPR001034 DeoR-type HTH domain Alide_3975 IPR014036 DeoR C-terminal sensor domain Alide_3975 IPR037171 NagB/RpiA transferase-like Alide_3975 IPR018356 Transcription regulator, HTH DeoR-type, conserved site Alide_3975 IPR036390 Winged helix DNA-binding domain superfamily Alide_3976 IPR018485 Carbohydrate kinase, FGGY, C-terminal Alide_3976 IPR000577 Carbohydrate kinase, FGGY Alide_3976 IPR018483 Carbohydrate kinase, FGGY, conserved site Alide_3976 IPR018484 Carbohydrate kinase, FGGY, N-terminal Alide_3976 IPR005999 Glycerol kinase Alide_3977 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Alide_3977 IPR036291 NAD(P)-binding domain superfamily Alide_3977 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Alide_3977 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain Alide_3977 IPR000304 Pyrroline-5-carboxylate reductase Alide_3979 IPR006370 4-hydroxybenzoate polyprenyltransferase-like Alide_3979 IPR030470 UbiA prenyltransferase conserved site Alide_3979 IPR000537 UbiA prenyltransferase family Alide_3979 IPR039653 Prenyltransferase Alide_3980 IPR002177 DNA-binding protein Dps Alide_3980 IPR012347 Ferritin-like Alide_3980 IPR023188 DNA-binding protein Dps, conserved site Alide_3980 IPR008331 Ferritin/DPS protein domain Alide_3980 IPR009078 Ferritin-like superfamily Alide_3981 IPR005119 LysR, substrate-binding Alide_3981 IPR000847 Transcription regulator HTH, LysR Alide_3981 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3981 IPR036390 Winged helix DNA-binding domain superfamily Alide_3982 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3982 IPR004609 ATP-dependent DNA helicase RecG Alide_3982 IPR011545 DEAD/DEAH box helicase domain Alide_3982 IPR014001 Helicase superfamily 1/2, ATP-binding domain Alide_3982 IPR001650 Helicase, C-terminal Alide_3982 IPR012340 Nucleic acid-binding, OB-fold Alide_3982 IPR033454 RecG, wedge domain Alide_3983 IPR037522 HD-GYP domain Alide_3983 IPR006674 HD domain Alide_3983 IPR006675 HDIG domain Alide_3983 IPR003607 HD/PDEase domain Alide_3983 IPR021812 Protein of unknown function DUF3391 Alide_3984 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA Alide_3984 IPR042118 QueA, domain 1 Alide_3984 IPR042119 QueA, domain 2 Alide_3984 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily Alide_3986 IPR029055 Nucleophile aminohydrolases, N-terminal Alide_3987 IPR005064 Bordetella uptake gene Alide_3987 IPR042100 Bordetella uptake gene, domain 1 Alide_3988 IPR036390 Winged helix DNA-binding domain superfamily Alide_3988 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_3988 IPR000847 Transcription regulator HTH, LysR Alide_3988 IPR005119 LysR, substrate-binding Alide_3989 IPR002043 Uracil-DNA glycosylase family 1 Alide_3989 IPR018085 Uracil-DNA glycosylase, active site Alide_3989 IPR005122 Uracil-DNA glycosylase-like Alide_3989 IPR036895 Uracil-DNA glycosylase-like domain superfamily Alide_3990 IPR013785 Aldolase-type TIM barrel Alide_3990 IPR013798 Indole-3-glycerol phosphate synthase Alide_3990 IPR001468 Indole-3-glycerol phosphate synthase, conserved site Alide_3990 IPR011060 Ribulose-phosphate binding barrel Alide_3992 IPR000312 Glycosyl transferase, family 3 Alide_3992 IPR005940 Anthranilate phosphoribosyl transferase Alide_3992 IPR017459 Glycosyl transferase family 3, N-terminal domain Alide_3992 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Alide_3992 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Alide_3993 IPR029062 Class I glutamine amidotransferase-like Alide_3993 IPR017926 Glutamine amidotransferase Alide_3993 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain Alide_3996 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_3996 IPR025669 AAA domain Alide_4003 IPR000424 Primosome PriB/single-strand DNA-binding Alide_4003 IPR012340 Nucleic acid-binding, OB-fold Alide_4003 IPR011344 Single-stranded DNA-binding protein Alide_4004 IPR034144 DNA topoisomerase 3-like, TOPRIM domain Alide_4004 IPR003601 DNA topoisomerase, type IA, domain 2 Alide_4004 IPR000380 DNA topoisomerase, type IA Alide_4004 IPR006171 TOPRIM domain Alide_4004 IPR005738 DNA topoisomerase III Alide_4004 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Alide_4004 IPR023406 DNA topoisomerase, type IA, active site Alide_4004 IPR013497 DNA topoisomerase, type IA, central Alide_4004 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Alide_4004 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Alide_4004 IPR023405 DNA topoisomerase, type IA, core domain Alide_4004 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Alide_4005 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4005 IPR001270 ClpA/B family Alide_4005 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Alide_4005 IPR003593 AAA+ ATPase domain Alide_4005 IPR002611 IstB-like ATP-binding protein Alide_4006 IPR017894 HTH domain, IS21 transposase-type Alide_4006 IPR001584 Integrase, catalytic core Alide_4029 IPR025657 RadC-like JAB domain Alide_4029 IPR037518 MPN domain Alide_4029 IPR020891 Uncharacterised protein family UPF0758, conserved site Alide_4029 IPR001405 Uncharacterised protein family UPF0758 Alide_4029 IPR010994 RuvA domain 2-like Alide_4044 IPR001584 Integrase, catalytic core Alide_4044 IPR017894 HTH domain, IS21 transposase-type Alide_4045 IPR002611 IstB-like ATP-binding protein Alide_4045 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4045 IPR003593 AAA+ ATPase domain Alide_4045 IPR001270 ClpA/B family Alide_4045 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Alide_4051 IPR005801 ADC synthase Alide_4051 IPR019999 Anthranilate synthase component I-like Alide_4051 IPR005256 Anthranilate synthase component I, PabB-like Alide_4051 IPR015890 Chorismate-utilising enzyme, C-terminal Alide_4051 IPR006805 Anthranilate synthase component I, N-terminal Alide_4052 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Alide_4052 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Alide_4052 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Alide_4052 IPR003660 HAMP domain Alide_4052 IPR004090 Chemotaxis methyl-accepting receptor Alide_4052 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Alide_4053 IPR001633 EAL domain Alide_4053 IPR035919 EAL domain superfamily Alide_4053 IPR000160 GGDEF domain Alide_4053 IPR005330 MHYT domain Alide_4053 IPR029787 Nucleotide cyclase Alide_4054 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic Alide_4054 IPR036412 HAD-like superfamily Alide_4054 IPR041492 Haloacid dehalogenase-like hydrolase Alide_4054 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Alide_4054 IPR006439 HAD hydrolase, subfamily IA Alide_4054 IPR037512 Phosphoglycolate phosphatase, prokaryotic Alide_4054 IPR023214 HAD superfamily Alide_4056 IPR013785 Aldolase-type TIM barrel Alide_4056 IPR026019 Ribulose-phosphate 3-epimerase Alide_4056 IPR000056 Ribulose-phosphate 3-epimerase-like Alide_4056 IPR011060 Ribulose-phosphate binding barrel Alide_4057 IPR036767 ApaG domain superfamily Alide_4057 IPR023065 Uncharacterised protein family ApaG Alide_4057 IPR007474 ApaG domain Alide_4060 IPR006336 Glutamate--cysteine ligase, GCS2 Alide_4060 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Alide_4060 IPR011793 Putative glutamate--cysteine ligase YbdK Alide_4061 IPR036921 PurM-like, N-terminal domain superfamily Alide_4061 IPR010918 PurM-like, C-terminal domain Alide_4061 IPR006283 Thiamine-monophosphate kinase Alide_4061 IPR036676 PurM-like, C-terminal domain superfamily Alide_4061 IPR016188 PurM-like, N-terminal domain Alide_4062 IPR013572 Transcription regulator MAATS, C-terminal Alide_4062 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Alide_4062 IPR001647 DNA-binding HTH domain, TetR-type Alide_4062 IPR009057 Homeobox-like domain superfamily Alide_4062 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Alide_4063 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain Alide_4063 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I Alide_4063 IPR000073 Alpha/beta hydrolase fold-1 Alide_4063 IPR029058 Alpha/Beta hydrolase fold Alide_4064 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Alide_4064 IPR003423 Outer membrane efflux protein Alide_4065 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Alide_4066 IPR003593 AAA+ ATPase domain Alide_4066 IPR000412 ABC-2 transporter Alide_4066 IPR017871 ABC transporter, conserved site Alide_4066 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4066 IPR003439 ABC transporter-like Alide_4067 IPR000412 ABC-2 transporter Alide_4068 IPR012147 Phosphate acetyl/butyryltransferase Alide_4068 IPR002505 Phosphate acetyl/butaryl transferase Alide_4069 IPR004372 Acetate/propionate kinase Alide_4069 IPR000890 Aliphatic acid kinase, short-chain Alide_4069 IPR023865 Aliphatic acid kinase, short-chain, conserved site Alide_4070 IPR036681 PgpA-like superfamily Alide_4070 IPR026037 Phosphatidylglycerophosphatase A Alide_4070 IPR007686 YutG/PgpA domain Alide_4071 IPR008136 CinA, C-terminal Alide_4071 IPR036653 CinA-like, C-terminal Alide_4072 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Alide_4072 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Alide_4072 IPR003660 HAMP domain Alide_4072 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Alide_4072 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Alide_4072 IPR004090 Chemotaxis methyl-accepting receptor Alide_4073 IPR000160 GGDEF domain Alide_4073 IPR005330 MHYT domain Alide_4073 IPR029787 Nucleotide cyclase Alide_4073 IPR001633 EAL domain Alide_4073 IPR035919 EAL domain superfamily Alide_4074 IPR008327 Signal transduction response regulator, antiterminator Alide_4074 IPR001789 Signal transduction response regulator, receiver domain Alide_4074 IPR005561 ANTAR domain Alide_4074 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4074 IPR011006 CheY-like superfamily Alide_4075 IPR000014 PAS domain Alide_4075 IPR011102 Signal transduction histidine kinase, HWE region Alide_4075 IPR000700 PAS-associated, C-terminal Alide_4075 IPR035965 PAS domain superfamily Alide_4075 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_4075 IPR001610 PAC motif Alide_4076 IPR004027 SEC-C motif Alide_4076 IPR036255 YgfB-like superfamily Alide_4076 IPR011978 Uncharacterised protein family UPF0149 Alide_4078 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_4078 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Alide_4078 IPR004114 THUMP domain Alide_4078 IPR000241 Putative RNA methylase domain Alide_4079 IPR033479 Double Cache domain 1 Alide_4079 IPR000727 Target SNARE coiled-coil homology domain Alide_4079 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Alide_4079 IPR004090 Chemotaxis methyl-accepting receptor Alide_4079 IPR003660 HAMP domain Alide_4079 IPR029151 Periplasmic sensor-like domain superfamily Alide_4081 IPR000394 RNA polymerase sigma factor 54 Alide_4081 IPR007046 RNA polymerase sigma factor 54, core-binding domain Alide_4081 IPR007634 RNA polymerase sigma factor 54, DNA-binding Alide_4081 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Alide_4082 IPR017871 ABC transporter, conserved site Alide_4082 IPR030921 LPS export ABC transporter, ATP-binding protein LptB Alide_4082 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4082 IPR003439 ABC transporter-like Alide_4082 IPR003593 AAA+ ATPase domain Alide_4084 IPR001853 DSBA-like thioredoxin domain Alide_4084 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL Alide_4084 IPR036249 Thioredoxin-like superfamily Alide_4084 IPR013766 Thioredoxin domain Alide_4084 IPR017937 Thioredoxin, conserved site Alide_4086 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Alide_4086 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_4086 IPR008909 DALR anticodon binding Alide_4086 IPR001278 Arginine-tRNA ligase Alide_4086 IPR035684 Arginyl-tRNA synthetase, catalytic core domain Alide_4086 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily Alide_4086 IPR005148 Arginyl tRNA synthetase N-terminal domain Alide_4086 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Alide_4089 IPR018107 Sodium:dicarboxylate symporter, conserved site Alide_4089 IPR001991 Sodium:dicarboxylate symporter Alide_4089 IPR023954 C4-dicarboxylate transport protein Alide_4089 IPR036458 Sodium:dicarboxylate symporter superfamily Alide_4090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_4090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_4090 IPR003594 Histidine kinase/HSP90-like ATPase Alide_4090 IPR029151 Periplasmic sensor-like domain superfamily Alide_4090 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) Alide_4090 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_4090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_4090 IPR005467 Histidine kinase domain Alide_4091 IPR000792 Transcription regulator LuxR, C-terminal Alide_4091 IPR001789 Signal transduction response regulator, receiver domain Alide_4091 IPR016032 Signal transduction response regulator, C-terminal effector Alide_4091 IPR011006 CheY-like superfamily Alide_4092 IPR000847 Transcription regulator HTH, LysR Alide_4092 IPR005119 LysR, substrate-binding Alide_4092 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4092 IPR036390 Winged helix DNA-binding domain superfamily Alide_4093 IPR011076 Malate synthase-like superfamily Alide_4093 IPR001465 Malate synthase Alide_4093 IPR006253 Malate synthase G Alide_4093 IPR023310 Malate synthase G, beta sub-domain Alide_4095 IPR014347 Tautomerase/MIF superfamily Alide_4095 IPR004370 4-oxalocrotonate tautomerase Alide_4095 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type Alide_4097 IPR017932 Glutamine amidotransferase type 2 domain Alide_4097 IPR029055 Nucleophile aminohydrolases, N-terminal Alide_4097 IPR026869 Putative glutamine amidotransferase type 2 Alide_4098 IPR006284 Glutathione synthetase, prokaryotic Alide_4098 IPR016185 Pre-ATP-grasp domain superfamily Alide_4098 IPR011761 ATP-grasp fold Alide_4098 IPR004218 Prokaryotic glutathione synthetase, ATP-binding Alide_4098 IPR004215 Prokaryotic glutathione synthetase, N-terminal Alide_4098 IPR013815 ATP-grasp fold, subdomain 1 Alide_4099 IPR004711 Benzoate transporter Alide_4100 IPR003855 Potassium transporter Alide_4100 IPR023051 Potassium uptake protein, low affinity, Kup Alide_4102 IPR004772 TrkH potassium transport family Alide_4102 IPR003445 Cation transporter Alide_4103 IPR036291 NAD(P)-binding domain superfamily Alide_4103 IPR006036 Potassium uptake protein TrkA Alide_4103 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily Alide_4103 IPR003148 Regulator of K+ conductance, N-terminal Alide_4103 IPR006037 Regulator of K+ conductance, C-terminal Alide_4104 IPR016161 Aldehyde/histidinol dehydrogenase Alide_4104 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_4104 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_4104 IPR015590 Aldehyde dehydrogenase domain Alide_4104 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site Alide_4104 IPR012134 Glutamate-5-semialdehyde dehydrogenase Alide_4104 IPR000965 GPR domain Alide_4109 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4109 IPR005790 DNA polymerase III, delta subunit Alide_4109 IPR032780 DNA polymerase III subunit delta, C-terminal Alide_4109 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Alide_4109 IPR010372 DNA polymerase III delta, N-terminal Alide_4111 IPR002300 Aminoacyl-tRNA synthetase, class Ia Alide_4111 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Alide_4111 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Alide_4111 IPR002302 Leucine-tRNA ligase Alide_4111 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Alide_4111 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_4111 IPR025709 Leucyl-tRNA synthetase, editing domain Alide_4111 IPR015413 Methionyl/Leucyl tRNA synthetase Alide_4111 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Alide_4112 IPR010920 LSM domain superfamily Alide_4112 IPR006685 Mechanosensitive ion channel MscS Alide_4112 IPR011066 Mechanosensitive ion channel MscS, C-terminal Alide_4112 IPR030192 Miniconductance mechanosensitive channel YbdG Alide_4113 IPR016160 Aldehyde dehydrogenase, cysteine active site Alide_4113 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_4113 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Alide_4113 IPR016161 Aldehyde/histidinol dehydrogenase Alide_4113 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_4113 IPR015590 Aldehyde dehydrogenase domain Alide_4115 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Alide_4115 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Alide_4115 IPR003593 AAA+ ATPase domain Alide_4115 IPR003018 GAF domain Alide_4115 IPR029016 GAF-like domain superfamily Alide_4115 IPR009057 Homeobox-like domain superfamily Alide_4115 IPR002197 DNA binding HTH domain, Fis-type Alide_4115 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4115 IPR002078 RNA polymerase sigma factor 54 interaction domain Alide_4115 IPR025944 Sigma-54 interaction domain, conserved site Alide_4117 IPR001633 EAL domain Alide_4117 IPR012226 Diguanylate cyclase/phosphodiesterase Alide_4117 IPR000160 GGDEF domain Alide_4117 IPR029787 Nucleotide cyclase Alide_4117 IPR001610 PAC motif Alide_4117 IPR000014 PAS domain Alide_4117 IPR000700 PAS-associated, C-terminal Alide_4117 IPR035965 PAS domain superfamily Alide_4117 IPR035919 EAL domain superfamily Alide_4118 IPR003400 Biopolymer transport protein ExbD/TolR Alide_4119 IPR002898 MotA/TolQ/ExbB proton channel Alide_4121 IPR037873 BamE-like Alide_4121 IPR026592 Outer membrane protein assembly factor BamE Alide_4121 IPR007450 Lipoprotein SmpA/OmlA Alide_4122 IPR036390 Winged helix DNA-binding domain superfamily Alide_4122 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4122 IPR002481 Ferric-uptake regulator Alide_4123 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Alide_4123 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal Alide_4123 IPR011104 HPr kinase/phosphorylase, C-terminal Alide_4123 IPR003755 HPr(Ser) kinase/phosphorylase Alide_4124 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN Alide_4124 IPR002178 PTS EIIA type-2 domain Alide_4124 IPR016152 Phosphotransferase/anion transporter Alide_4125 IPR036567 Ribosome hibernation promotion factor-like Alide_4125 IPR003489 Ribosome hibernation promoting factor/RaiA Alide_4126 IPR028923 SAICAR synthetase/ADE2, N-terminal Alide_4126 IPR018236 SAICAR synthetase, conserved site Alide_4126 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase Alide_4127 IPR036249 Thioredoxin-like superfamily Alide_4127 IPR005746 Thioredoxin Alide_4127 IPR017937 Thioredoxin, conserved site Alide_4127 IPR013766 Thioredoxin domain Alide_4128 IPR033747 Class I PurE Alide_4128 IPR000031 PurE domain Alide_4128 IPR024694 PurE, prokaryotic type Alide_4128 IPR035893 PurE domain superfamily Alide_4129 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain Alide_4129 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Alide_4129 IPR011054 Rudiment single hybrid motif Alide_4129 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit Alide_4129 IPR016185 Pre-ATP-grasp domain superfamily Alide_4129 IPR013815 ATP-grasp fold, subdomain 1 Alide_4129 IPR011761 ATP-grasp fold Alide_4130 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily Alide_4130 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Alide_4130 IPR005145 Putative GTP-binding controlling metal-binding domain Alide_4130 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 Alide_4130 IPR006070 YrdC-like domain Alide_4144 IPR005618 Outer membrane protein, OmpW Alide_4144 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Alide_4146 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C Alide_4146 IPR012338 Beta-lactamase/transpeptidase-like Alide_4147 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB Alide_4147 IPR000905 Gcp-like domain Alide_4150 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB Alide_4150 IPR004488 Magnesium/cobalt transport protein CorA Alide_4153 IPR035994 Nucleoside phosphorylase superfamily Alide_4153 IPR000845 Nucleoside phosphorylase domain Alide_4153 IPR010049 MTA/SAH nucleosidase Alide_4154 IPR000873 AMP-dependent synthetase/ligase Alide_4154 IPR025110 AMP-binding enzyme, C-terminal domain Alide_4154 IPR020845 AMP-binding, conserved site Alide_4154 IPR042099 AMP-dependent synthetase-like superfamily Alide_4155 IPR012136 NADP transhydrogenase, beta subunit Alide_4155 IPR029035 DHS-like NAD/FAD-binding domain superfamily Alide_4155 IPR034300 NADP transhydrogenase beta-like domain Alide_4156 IPR036291 NAD(P)-binding domain superfamily Alide_4156 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Alide_4156 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal Alide_4156 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Alide_4156 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 Alide_4156 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 Alide_4156 IPR026255 NAD(P) transhydrogenase, alpha subunit Alide_4158 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype Alide_4158 IPR013785 Aldolase-type TIM barrel Alide_4158 IPR000771 Fructose-bisphosphate aldolase, class-II Alide_4159 IPR040442 Pyruvate kinase-like domain superfamily Alide_4159 IPR011037 Pyruvate kinase-like, insert domain superfamily Alide_4159 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Alide_4159 IPR018209 Pyruvate kinase, active site Alide_4159 IPR015793 Pyruvate kinase, barrel Alide_4159 IPR036918 Pyruvate kinase, C-terminal domain superfamily Alide_4159 IPR001697 Pyruvate kinase Alide_4159 IPR015806 Pyruvate kinase, insert domain superfamily Alide_4159 IPR015795 Pyruvate kinase, C-terminal Alide_4160 IPR036005 Creatinase/aminopeptidase-like Alide_4160 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Alide_4160 IPR001714 Peptidase M24, methionine aminopeptidase Alide_4160 IPR007865 Aminopeptidase P, N-terminal Alide_4160 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Alide_4160 IPR000994 Peptidase M24 Alide_4161 IPR001753 Enoyl-CoA hydratase/isomerase Alide_4161 IPR029045 ClpP/crotonase-like domain superfamily Alide_4161 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_4161 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_4162 IPR005064 Bordetella uptake gene Alide_4162 IPR042100 Bordetella uptake gene, domain 1 Alide_4163 IPR003673 CoA-transferase family III Alide_4163 IPR023606 CoA-transferase family III domain superfamily Alide_4166 IPR005064 Bordetella uptake gene Alide_4166 IPR042100 Bordetella uptake gene, domain 1 Alide_4167 IPR036390 Winged helix DNA-binding domain superfamily Alide_4167 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4167 IPR000847 Transcription regulator HTH, LysR Alide_4167 IPR005119 LysR, substrate-binding Alide_4168 IPR029044 Nucleotide-diphospho-sugar transferases Alide_4168 IPR005835 Nucleotidyl transferase domain Alide_4169 IPR005475 Transketolase-like, pyrimidine-binding domain Alide_4169 IPR029061 Thiamin diphosphate-binding fold Alide_4169 IPR005474 Transketolase, N-terminal Alide_4169 IPR005478 Transketolase, bacterial-like Alide_4169 IPR033248 Transketolase, C-terminal domain Alide_4169 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Alide_4169 IPR020826 Transketolase binding site Alide_4169 IPR033247 Transketolase family Alide_4170 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain Alide_4170 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I Alide_4170 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family Alide_4170 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site Alide_4170 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain Alide_4170 IPR036291 NAD(P)-binding domain superfamily Alide_4172 IPR017926 Glutamine amidotransferase Alide_4172 IPR029062 Class I glutamine amidotransferase-like Alide_4172 IPR011697 Peptidase C26 Alide_4173 IPR000847 Transcription regulator HTH, LysR Alide_4173 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain Alide_4173 IPR036390 Winged helix DNA-binding domain superfamily Alide_4173 IPR005119 LysR, substrate-binding Alide_4173 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4174 IPR006680 Amidohydrolase-related Alide_4174 IPR032466 Metal-dependent hydrolase Alide_4175 IPR036291 NAD(P)-binding domain superfamily Alide_4175 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_4175 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_4180 IPR030149 TonB-dependent siderophore receptor FcuA/FatA Alide_4180 IPR012910 TonB-dependent receptor, plug domain Alide_4180 IPR037066 TonB-dependent receptor, plug domain superfamily Alide_4180 IPR010105 TonB-dependent siderophore receptor Alide_4180 IPR039423 TonB-dependent receptor-like Alide_4180 IPR010917 TonB-dependent receptor, conserved site Alide_4180 IPR000531 TonB-dependent receptor-like, beta-barrel Alide_4180 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Alide_4180 IPR010916 TonB box, conserved site Alide_4182 IPR042100 Bordetella uptake gene, domain 1 Alide_4182 IPR005064 Bordetella uptake gene Alide_4185 IPR036390 Winged helix DNA-binding domain superfamily Alide_4185 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4185 IPR000847 Transcription regulator HTH, LysR Alide_4185 IPR005119 LysR, substrate-binding Alide_4185 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain Alide_4187 IPR036291 NAD(P)-binding domain superfamily Alide_4187 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_4187 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_4193 IPR042100 Bordetella uptake gene, domain 1 Alide_4193 IPR005064 Bordetella uptake gene Alide_4194 IPR016102 Succinyl-CoA synthetase-like Alide_4194 IPR011761 ATP-grasp fold Alide_4194 IPR016181 Acyl-CoA N-acyltransferase Alide_4194 IPR000182 GNAT domain Alide_4194 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Alide_4194 IPR003781 CoA-binding Alide_4194 IPR036291 NAD(P)-binding domain superfamily Alide_4194 IPR013815 ATP-grasp fold, subdomain 1 Alide_4195 IPR010987 Glutathione S-transferase, C-terminal-like Alide_4195 IPR040079 Glutathione Transferase family Alide_4195 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Alide_4195 IPR004045 Glutathione S-transferase, N-terminal Alide_4195 IPR036249 Thioredoxin-like superfamily Alide_4196 IPR036291 NAD(P)-binding domain superfamily Alide_4196 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_4198 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Alide_4198 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Alide_4198 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Alide_4198 IPR005738 DNA topoisomerase III Alide_4198 IPR023406 DNA topoisomerase, type IA, active site Alide_4198 IPR003601 DNA topoisomerase, type IA, domain 2 Alide_4198 IPR000380 DNA topoisomerase, type IA Alide_4198 IPR023405 DNA topoisomerase, type IA, core domain Alide_4198 IPR013497 DNA topoisomerase, type IA, central Alide_4198 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Alide_4198 IPR006171 TOPRIM domain Alide_4198 IPR034144 DNA topoisomerase 3-like, TOPRIM domain Alide_4200 IPR036390 Winged helix DNA-binding domain superfamily Alide_4200 IPR030855 Bifunctional ligase/repressor BirA Alide_4200 IPR008988 Transcriptional repressor, C-terminal Alide_4200 IPR003142 Biotin protein ligase, C-terminal Alide_4200 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4200 IPR004408 Biotin--acetyl-CoA-carboxylase ligase Alide_4200 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain Alide_4200 IPR013196 Helix-turn-helix, type 11 Alide_4200 IPR004409 Biotin operon repressor, helix-turn-helix domain Alide_4202 IPR011032 GroES-like superfamily Alide_4202 IPR013154 Alcohol dehydrogenase, N-terminal Alide_4202 IPR013149 Alcohol dehydrogenase, C-terminal Alide_4202 IPR036291 NAD(P)-binding domain superfamily Alide_4202 IPR020843 Polyketide synthase, enoylreductase domain Alide_4204 IPR029069 HotDog domain superfamily Alide_4204 IPR039569 N-terminal of MaoC-like dehydratase Alide_4204 IPR016709 Uncharacterised protein family UPF0336 Alide_4206 IPR025110 AMP-binding enzyme, C-terminal domain Alide_4206 IPR020845 AMP-binding, conserved site Alide_4206 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain Alide_4206 IPR000873 AMP-dependent synthetase/ligase Alide_4206 IPR042099 AMP-dependent synthetase-like superfamily Alide_4206 IPR011904 Acetate-CoA ligase Alide_4207 IPR036390 Winged helix DNA-binding domain superfamily Alide_4207 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4207 IPR023187 Transcriptional regulator MarR-type, conserved site Alide_4207 IPR000835 MarR-type HTH domain Alide_4211 IPR042100 Bordetella uptake gene, domain 1 Alide_4211 IPR005064 Bordetella uptake gene Alide_4212 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_4212 IPR003594 Histidine kinase/HSP90-like ATPase Alide_4212 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_4212 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_4212 IPR003660 HAMP domain Alide_4212 IPR013727 Two-component sensor kinase, N-terminal Alide_4212 IPR005467 Histidine kinase domain Alide_4212 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_4213 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4213 IPR011006 CheY-like superfamily Alide_4213 IPR039420 Transcriptional regulatory protein WalR-like Alide_4213 IPR001789 Signal transduction response regulator, receiver domain Alide_4213 IPR016032 Signal transduction response regulator, C-terminal effector Alide_4213 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_4214 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_4214 IPR015424 Pyridoxal phosphate-dependent transferase Alide_4214 IPR000192 Aminotransferase class V domain Alide_4214 IPR012703 2-aminoethylphosphonate--pyruvate transaminase Alide_4214 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_4214 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase Alide_4215 IPR035906 MetI-like superfamily Alide_4215 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_4216 IPR003439 ABC transporter-like Alide_4216 IPR017871 ABC transporter, conserved site Alide_4216 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 Alide_4216 IPR015853 ABC transporter, ferric cation import, FbpC Alide_4216 IPR003593 AAA+ ATPase domain Alide_4216 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4216 IPR008995 Molybdate/tungstate binding, C-terminal Alide_4217 IPR026045 Ferric binding protein Alide_4219 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase Alide_4219 IPR023116 Phosphonoacetate hydrolase, insert domain superfamily Alide_4219 IPR012710 Phosphonoacetate hydrolase Alide_4219 IPR017850 Alkaline-phosphatase-like, core domain superfamily Alide_4220 IPR015590 Aldehyde dehydrogenase domain Alide_4220 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_4220 IPR016161 Aldehyde/histidinol dehydrogenase Alide_4220 IPR017656 Putative phosphonoacetaldehyde dehydrogenase Alide_4220 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Alide_4220 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_4222 IPR006076 FAD dependent oxidoreductase Alide_4222 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_4223 IPR011079 Alanine racemase, C-terminal Alide_4223 IPR001608 Alanine racemase, N-terminal Alide_4223 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Alide_4223 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site Alide_4223 IPR000821 Alanine racemase Alide_4223 IPR029066 PLP-binding barrel Alide_4224 IPR023080 D-amino acid dehydrogenase DadA Alide_4224 IPR006076 FAD dependent oxidoreductase Alide_4224 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_4225 IPR019888 Transcription regulator AsnC-type Alide_4225 IPR036390 Winged helix DNA-binding domain superfamily Alide_4225 IPR000485 AsnC-type HTH domain Alide_4225 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Alide_4225 IPR011008 Dimeric alpha-beta barrel Alide_4225 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4225 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Alide_4225 IPR011991 ArsR-like helix-turn-helix domain Alide_4227 IPR020584 DNA recombination/repair protein RecA, conserved site Alide_4227 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface Alide_4227 IPR023400 DNA recombination and repair protein RecA, C-terminal Alide_4227 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain Alide_4227 IPR013765 DNA recombination and repair protein RecA Alide_4227 IPR003593 AAA+ ATPase domain Alide_4227 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4228 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4228 IPR003783 Regulatory protein RecX Alide_4230 IPR005665 Protein-export membrane protein SecF, bacterial Alide_4230 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Alide_4230 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Alide_4230 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Alide_4231 IPR005791 Protein translocase subunit SecD Alide_4231 IPR027398 SecD export protein N-terminal TM domain Alide_4231 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Alide_4231 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Alide_4231 IPR001036 Acriflavin resistance protein Alide_4231 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Alide_4232 IPR003849 Preprotein translocase YajC Alide_4234 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Alide_4234 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4234 IPR036390 Winged helix DNA-binding domain superfamily Alide_4234 IPR011991 ArsR-like helix-turn-helix domain Alide_4234 IPR000485 AsnC-type HTH domain Alide_4234 IPR011008 Dimeric alpha-beta barrel Alide_4234 IPR019888 Transcription regulator AsnC-type Alide_4234 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Alide_4235 IPR036259 MFS transporter superfamily Alide_4235 IPR010290 Transmembrane secretion effector Alide_4235 IPR020846 Major facilitator superfamily domain Alide_4236 IPR010611 3D domain Alide_4236 IPR026044 Membrane-bound lytic murein transglycosylase A Alide_4236 IPR005300 Lytic transglycosylase MltA, domain B Alide_4236 IPR034654 MltA, 3D domain Alide_4236 IPR036908 RlpA-like domain superfamily Alide_4238 IPR036737 OmpA-like domain superfamily Alide_4238 IPR006690 Outer membrane protein, OmpA-like, conserved site Alide_4238 IPR006665 OmpA-like domain Alide_4238 IPR007055 BON domain Alide_4238 IPR006664 Outer membrane protein, bacterial Alide_4239 IPR000792 Transcription regulator LuxR, C-terminal Alide_4239 IPR011006 CheY-like superfamily Alide_4239 IPR001789 Signal transduction response regulator, receiver domain Alide_4239 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4240 IPR000014 PAS domain Alide_4240 IPR001610 PAC motif Alide_4240 IPR013767 PAS fold Alide_4240 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_4240 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_4240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_4240 IPR035965 PAS domain superfamily Alide_4240 IPR000700 PAS-associated, C-terminal Alide_4240 IPR005467 Histidine kinase domain Alide_4240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_4240 IPR003594 Histidine kinase/HSP90-like ATPase Alide_4241 IPR036526 Carbon-nitrogen hydrolase superfamily Alide_4241 IPR003010 Carbon-nitrogen hydrolase Alide_4241 IPR001110 Uncharacterised protein family UPF0012, conserved site Alide_4243 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme Alide_4243 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase Alide_4243 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain Alide_4244 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG Alide_4244 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Alide_4245 IPR001036 Acriflavin resistance protein Alide_4245 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Alide_4246 IPR034343 Uncharacterized GST-like protein YibF Alide_4246 IPR036249 Thioredoxin-like superfamily Alide_4246 IPR004046 Glutathione S-transferase, C-terminal Alide_4246 IPR004045 Glutathione S-transferase, N-terminal Alide_4246 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Alide_4246 IPR010987 Glutathione S-transferase, C-terminal-like Alide_4247 IPR008948 L-Aspartase-like Alide_4247 IPR022761 Fumarate lyase, N-terminal Alide_4247 IPR000362 Fumarate lyase family Alide_4247 IPR013539 Adenylosuccinate lyase PurB, C-terminal Alide_4247 IPR004769 Adenylosuccinate lyase Alide_4247 IPR020557 Fumarate lyase, conserved site Alide_4247 IPR024083 Fumarase/histidase, N-terminal Alide_4248 IPR011335 Restriction endonuclease type II-like Alide_4248 IPR009822 YaeQ Alide_4248 IPR038590 YaeQ superfamily Alide_4251 IPR005496 Integral membrane protein TerC Alide_4251 IPR022301 Integral membrane protein YjbE Alide_4253 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain Alide_4253 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4253 IPR036390 Winged helix DNA-binding domain superfamily Alide_4253 IPR000847 Transcription regulator HTH, LysR Alide_4253 IPR005119 LysR, substrate-binding Alide_4256 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV Alide_4257 IPR001915 Peptidase M48 Alide_4257 IPR030873 Beta-barrel assembly-enhancing protease Alide_4257 IPR011990 Tetratricopeptide-like helical domain superfamily Alide_4257 IPR019734 Tetratricopeptide repeat Alide_4257 IPR013026 Tetratricopeptide repeat-containing domain Alide_4258 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain Alide_4258 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily Alide_4258 IPR023045 Molybdenum cofactor biosynthesis C Alide_4260 IPR001082 Fimbrial protein pilin Alide_4260 IPR012902 Prokaryotic N-terminal methylation site Alide_4261 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Alide_4261 IPR013471 Ribonuclease Z/BN Alide_4261 IPR001279 Metallo-beta-lactamase Alide_4262 IPR000253 Forkhead-associated (FHA) domain Alide_4262 IPR008984 SMAD/FHA domain superfamily Alide_4262 IPR032030 YscD, cytoplasmic domain Alide_4263 IPR001932 PPM-type phosphatase domain Alide_4263 IPR015655 Protein phosphatase 2C family Alide_4263 IPR036457 PPM-type phosphatase domain superfamily Alide_4264 IPR022301 Integral membrane protein YjbE Alide_4264 IPR005496 Integral membrane protein TerC Alide_4265 IPR016102 Succinyl-CoA synthetase-like Alide_4265 IPR003781 CoA-binding Alide_4265 IPR005810 Succinyl-CoA ligase, alpha subunit Alide_4265 IPR036291 NAD(P)-binding domain superfamily Alide_4265 IPR005811 ATP-citrate lyase/succinyl-CoA ligase Alide_4265 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Alide_4265 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Alide_4266 IPR013815 ATP-grasp fold, subdomain 1 Alide_4266 IPR011761 ATP-grasp fold Alide_4266 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type Alide_4266 IPR005811 ATP-citrate lyase/succinyl-CoA ligase Alide_4266 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site Alide_4266 IPR005809 Succinate--CoA synthetase, beta subunit Alide_4266 IPR016102 Succinyl-CoA synthetase-like Alide_4267 IPR036291 NAD(P)-binding domain superfamily Alide_4267 IPR000534 Semialdehyde dehydrogenase, NAD-binding Alide_4267 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site Alide_4267 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 Alide_4268 IPR041614 DprA, winged helix domain Alide_4268 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4268 IPR003488 DNA recombination-mediator protein A Alide_4270 IPR036821 Peptide deformylase superfamily Alide_4270 IPR023635 Peptide deformylase Alide_4272 IPR005794 Methionyl-tRNA formyltransferase Alide_4272 IPR002376 Formyl transferase, N-terminal Alide_4272 IPR036477 Formyl transferase, N-terminal domain superfamily Alide_4272 IPR005793 Formyl transferase, C-terminal Alide_4272 IPR011034 Formyl transferase-like, C-terminal domain superfamily Alide_4272 IPR001555 Phosphoribosylglycinamide formyltransferase, active site Alide_4272 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain Alide_4272 IPR037022 Formyl transferase, C-terminal domain superfamily Alide_4275 IPR001576 Phosphoglycerate kinase Alide_4275 IPR036043 Phosphoglycerate kinase superfamily Alide_4275 IPR015824 Phosphoglycerate kinase, N-terminal Alide_4275 IPR015911 Phosphoglycerate kinase, conserved site Alide_4278 IPR000620 EamA domain Alide_4279 IPR001754 Orotidine 5'-phosphate decarboxylase domain Alide_4279 IPR011060 Ribulose-phosphate binding barrel Alide_4279 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 Alide_4279 IPR018089 Orotidine 5'-phosphate decarboxylase, active site Alide_4279 IPR013785 Aldolase-type TIM barrel Alide_4281 IPR042100 Bordetella uptake gene, domain 1 Alide_4281 IPR005064 Bordetella uptake gene Alide_4283 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Alide_4283 IPR003660 HAMP domain Alide_4283 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Alide_4283 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Alide_4283 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Alide_4283 IPR004090 Chemotaxis methyl-accepting receptor Alide_4284 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4284 IPR017871 ABC transporter, conserved site Alide_4284 IPR004602 UvrABC system subunit A Alide_4284 IPR041552 UvrA DNA-binding domain Alide_4284 IPR041102 UvrA, interaction domain Alide_4284 IPR003439 ABC transporter-like Alide_4285 IPR011701 Major facilitator superfamily Alide_4285 IPR020846 Major facilitator superfamily domain Alide_4285 IPR036259 MFS transporter superfamily Alide_4286 IPR012340 Nucleic acid-binding, OB-fold Alide_4286 IPR011344 Single-stranded DNA-binding protein Alide_4286 IPR000424 Primosome PriB/single-strand DNA-binding Alide_4288 IPR003673 CoA-transferase family III Alide_4288 IPR023606 CoA-transferase family III domain superfamily Alide_4289 IPR042100 Bordetella uptake gene, domain 1 Alide_4289 IPR005064 Bordetella uptake gene Alide_4291 IPR042100 Bordetella uptake gene, domain 1 Alide_4291 IPR005064 Bordetella uptake gene Alide_4292 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_4292 IPR011283 Acetoacetyl-CoA reductase Alide_4292 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_4292 IPR036291 NAD(P)-binding domain superfamily Alide_4294 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_4294 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_4294 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_4294 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_4294 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_4294 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_4294 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_4295 IPR003673 CoA-transferase family III Alide_4295 IPR023606 CoA-transferase family III domain superfamily Alide_4296 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Alide_4296 IPR001753 Enoyl-CoA hydratase/isomerase Alide_4296 IPR014748 Enoyl-CoA hydratase, C-terminal Alide_4296 IPR029045 ClpP/crotonase-like domain superfamily Alide_4296 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB Alide_4297 IPR003804 L-lactate permease Alide_4298 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Alide_4298 IPR004506 tRNA-specific 2-thiouridylase Alide_4298 IPR023382 Adenine nucleotide alpha hydrolase-like domains Alide_4299 IPR000847 Transcription regulator HTH, LysR Alide_4299 IPR005119 LysR, substrate-binding Alide_4299 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4299 IPR036390 Winged helix DNA-binding domain superfamily Alide_4300 IPR007400 PrpF protein Alide_4301 IPR005064 Bordetella uptake gene Alide_4301 IPR042100 Bordetella uptake gene, domain 1 Alide_4302 IPR033900 Porin domain, Gram-negative type Alide_4302 IPR002299 Porin, Neisseria sp. type Alide_4302 IPR001702 Porin, Gram-negative type Alide_4302 IPR023614 Porin domain superfamily Alide_4303 IPR005119 LysR, substrate-binding Alide_4303 IPR000847 Transcription regulator HTH, LysR Alide_4303 IPR036390 Winged helix DNA-binding domain superfamily Alide_4303 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4304 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Alide_4304 IPR007329 FMN-binding Alide_4304 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_4304 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Alide_4305 IPR036197 NarG-like superfamily Alide_4305 IPR012830 Citrate utilization protein B Alide_4306 IPR005064 Bordetella uptake gene Alide_4306 IPR042100 Bordetella uptake gene, domain 1 Alide_4307 IPR001789 Signal transduction response regulator, receiver domain Alide_4307 IPR002078 RNA polymerase sigma factor 54 interaction domain Alide_4307 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Alide_4307 IPR025944 Sigma-54 interaction domain, conserved site Alide_4307 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4307 IPR002197 DNA binding HTH domain, Fis-type Alide_4307 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Alide_4307 IPR011006 CheY-like superfamily Alide_4307 IPR003593 AAA+ ATPase domain Alide_4307 IPR009057 Homeobox-like domain superfamily Alide_4308 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal Alide_4308 IPR029045 ClpP/crotonase-like domain superfamily Alide_4308 IPR034733 Acetyl-CoA carboxylase Alide_4308 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal Alide_4309 IPR005064 Bordetella uptake gene Alide_4309 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_4309 IPR042100 Bordetella uptake gene, domain 1 Alide_4311 IPR005482 Biotin carboxylase, C-terminal Alide_4311 IPR011761 ATP-grasp fold Alide_4311 IPR005481 Biotin carboxylase-like, N-terminal domain Alide_4311 IPR011054 Rudiment single hybrid motif Alide_4311 IPR016185 Pre-ATP-grasp domain superfamily Alide_4311 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Alide_4311 IPR011764 Biotin carboxylation domain Alide_4312 IPR000089 Biotin/lipoyl attachment Alide_4312 IPR011053 Single hybrid motif Alide_4316 IPR039426 Vitamin B12 transporter BtuB-like Alide_4316 IPR012910 TonB-dependent receptor, plug domain Alide_4316 IPR010917 TonB-dependent receptor, conserved site Alide_4316 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor Alide_4316 IPR037066 TonB-dependent receptor, plug domain superfamily Alide_4316 IPR000531 TonB-dependent receptor-like, beta-barrel Alide_4316 IPR011276 TonB-dependent haem/haemoglobin receptor Alide_4319 IPR042100 Bordetella uptake gene, domain 1 Alide_4319 IPR005064 Bordetella uptake gene Alide_4320 IPR003673 CoA-transferase family III Alide_4320 IPR023606 CoA-transferase family III domain superfamily Alide_4322 IPR000873 AMP-dependent synthetase/ligase Alide_4322 IPR042099 AMP-dependent synthetase-like superfamily Alide_4322 IPR020845 AMP-binding, conserved site Alide_4322 IPR025110 AMP-binding enzyme, C-terminal domain Alide_4323 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily Alide_4323 IPR001783 Lumazine-binding protein Alide_4323 IPR026017 Lumazine-binding domain Alide_4323 IPR017938 Riboflavin synthase-like beta-barrel Alide_4324 IPR001123 Amino acid exporter protein, LeuE-type Alide_4324 IPR004778 Homoserine/Threonine efflux protein Alide_4325 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Alide_4325 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Alide_4325 IPR005467 Histidine kinase domain Alide_4325 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Alide_4325 IPR003594 Histidine kinase/HSP90-like ATPase Alide_4325 IPR003660 HAMP domain Alide_4325 IPR038515 CpxA, periplasmic domain superfamily Alide_4325 IPR032404 Two-component sensor protein CpxA, periplasmic domain Alide_4325 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Alide_4326 IPR001789 Signal transduction response regulator, receiver domain Alide_4326 IPR039420 Transcriptional regulatory protein WalR-like Alide_4326 IPR011006 CheY-like superfamily Alide_4326 IPR001867 OmpR/PhoB-type DNA-binding domain Alide_4326 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4329 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Alide_4329 IPR012675 Beta-grasp domain superfamily Alide_4329 IPR039003 Carnitine monooxygenase reductase subunit Alide_4329 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Alide_4329 IPR036010 2Fe-2S ferredoxin-like superfamily Alide_4329 IPR017927 FAD-binding domain, ferredoxin reductase-type Alide_4329 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Alide_4329 IPR001433 Oxidoreductase FAD/NAD(P)-binding Alide_4329 IPR000951 Phthalate dioxygenase reductase Alide_4329 IPR017938 Riboflavin synthase-like beta-barrel Alide_4329 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Alide_4330 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Alide_4330 IPR016174 Di-haem cytochrome, transmembrane Alide_4333 IPR017927 FAD-binding domain, ferredoxin reductase-type Alide_4333 IPR017938 Riboflavin synthase-like beta-barrel Alide_4333 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Alide_4333 IPR012675 Beta-grasp domain superfamily Alide_4333 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Alide_4333 IPR036010 2Fe-2S ferredoxin-like superfamily Alide_4333 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Alide_4333 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Alide_4333 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Alide_4333 IPR001433 Oxidoreductase FAD/NAD(P)-binding Alide_4334 IPR003374 ApbE-like superfamily Alide_4334 IPR024932 Flavin transferase ApbE Alide_4334 IPR042159 Flavin-trafficking protein ApbE Alide_4337 IPR001757 P-type ATPase Alide_4337 IPR006068 Cation-transporting P-type ATPase, C-terminal Alide_4337 IPR023214 HAD superfamily Alide_4337 IPR036412 HAD-like superfamily Alide_4337 IPR008250 P-type ATPase, A domain superfamily Alide_4337 IPR023298 P-type ATPase, transmembrane domain superfamily Alide_4337 IPR023299 P-type ATPase, cytoplasmic domain N Alide_4337 IPR004014 Cation-transporting P-type ATPase, N-terminal Alide_4337 IPR018303 P-type ATPase, phosphorylation site Alide_4340 IPR013785 Aldolase-type TIM barrel Alide_4340 IPR004136 Nitronate monooxygenase Alide_4341 IPR005064 Bordetella uptake gene Alide_4341 IPR042100 Bordetella uptake gene, domain 1 Alide_4342 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_4342 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_4342 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_4342 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_4342 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_4342 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_4342 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_4343 IPR029016 GAF-like domain superfamily Alide_4343 IPR014757 Transcription regulator IclR, C-terminal Alide_4343 IPR005471 Transcription regulator IclR, N-terminal Alide_4343 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4343 IPR036390 Winged helix DNA-binding domain superfamily Alide_4344 IPR023606 CoA-transferase family III domain superfamily Alide_4344 IPR003673 CoA-transferase family III Alide_4347 IPR006089 Acyl-CoA dehydrogenase, conserved site Alide_4347 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Alide_4347 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Alide_4347 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Alide_4347 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Alide_4347 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Alide_4347 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Alide_4348 IPR042100 Bordetella uptake gene, domain 1 Alide_4348 IPR005064 Bordetella uptake gene Alide_4349 IPR036390 Winged helix DNA-binding domain superfamily Alide_4349 IPR005471 Transcription regulator IclR, N-terminal Alide_4349 IPR014757 Transcription regulator IclR, C-terminal Alide_4349 IPR029016 GAF-like domain superfamily Alide_4349 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4350 IPR023606 CoA-transferase family III domain superfamily Alide_4350 IPR003673 CoA-transferase family III Alide_4351 IPR036390 Winged helix DNA-binding domain superfamily Alide_4351 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4351 IPR000847 Transcription regulator HTH, LysR Alide_4351 IPR005119 LysR, substrate-binding Alide_4351 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain Alide_4352 IPR005064 Bordetella uptake gene Alide_4352 IPR042100 Bordetella uptake gene, domain 1 Alide_4353 IPR000101 Gamma-glutamyltranspeptidase Alide_4353 IPR029055 Nucleophile aminohydrolases, N-terminal Alide_4356 IPR030374 Polyamine biosynthesis domain Alide_4356 IPR001045 Spermidine/spermine synthases Alide_4356 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_4362 IPR005119 LysR, substrate-binding Alide_4362 IPR000847 Transcription regulator HTH, LysR Alide_4362 IPR036390 Winged helix DNA-binding domain superfamily Alide_4362 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4363 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Alide_4363 IPR005814 Aminotransferase class-III Alide_4363 IPR015424 Pyridoxal phosphate-dependent transferase Alide_4363 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Alide_4364 IPR015590 Aldehyde dehydrogenase domain Alide_4364 IPR010061 Methylmalonate-semialdehyde dehydrogenase Alide_4364 IPR016161 Aldehyde/histidinol dehydrogenase Alide_4364 IPR016163 Aldehyde dehydrogenase, C-terminal Alide_4364 IPR016160 Aldehyde dehydrogenase, cysteine active site Alide_4364 IPR016162 Aldehyde dehydrogenase, N-terminal Alide_4365 IPR029787 Nucleotide cyclase Alide_4365 IPR007894 MASE2 Alide_4365 IPR000160 GGDEF domain Alide_4366 IPR000524 Transcription regulator HTH, GntR Alide_4366 IPR008920 Transcription regulator FadR/GntR, C-terminal Alide_4366 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4366 IPR011711 GntR, C-terminal Alide_4366 IPR036390 Winged helix DNA-binding domain superfamily Alide_4368 IPR001851 ABC transporter, permease Alide_4369 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal Alide_4369 IPR001851 ABC transporter, permease Alide_4370 IPR003593 AAA+ ATPase domain Alide_4370 IPR003439 ABC transporter-like Alide_4370 IPR017871 ABC transporter, conserved site Alide_4370 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4370 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Alide_4371 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4371 IPR017871 ABC transporter, conserved site Alide_4371 IPR003439 ABC transporter-like Alide_4371 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Alide_4371 IPR003593 AAA+ ATPase domain Alide_4372 IPR002933 Peptidase M20 Alide_4372 IPR011650 Peptidase M20, dimerisation domain Alide_4372 IPR036264 Bacterial exopeptidase dimerisation domain Alide_4372 IPR010158 Amidase, carbamoylase-type Alide_4373 IPR009197 Microcystin LR degradation protein MlrC Alide_4373 IPR010799 Microcystin LR degradation protein MlrC, C-terminal Alide_4373 IPR015995 Microcystin LR degradation protein MlrC, N-terminal Alide_4374 IPR012188 NAD(P)-dependent malic enzyme Alide_4374 IPR036291 NAD(P)-binding domain superfamily Alide_4374 IPR015884 Malic enzyme, conserved site Alide_4374 IPR012301 Malic enzyme, N-terminal domain Alide_4374 IPR037062 Malic enzyme, N-terminal domain superfamily Alide_4374 IPR012302 Malic enzyme, NAD-binding Alide_4374 IPR042112 Phosphate acetyltransferase, domain 2 Alide_4374 IPR042113 Phosphate acetyltransferase, domain 1 Alide_4374 IPR002505 Phosphate acetyl/butaryl transferase Alide_4375 IPR000026 Guanine-specific ribonuclease N1/T1/U2 Alide_4375 IPR016191 Ribonuclease/ribotoxin Alide_4377 IPR011530 Ribosomal RNA adenine dimethylase Alide_4377 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal Alide_4377 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site Alide_4377 IPR023165 rRNA adenine dimethylase-like Alide_4377 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Alide_4377 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_4378 IPR015391 SurA N-terminal Alide_4378 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Alide_4378 IPR023034 Peptidyl-prolyl isomerase SurA Alide_4378 IPR027304 Trigger factor/SurA domain superfamily Alide_4378 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Alide_4379 IPR007543 LptD, C-terminal Alide_4379 IPR020889 LPS-assembly protein LptD Alide_4380 IPR011009 Protein kinase-like domain superfamily Alide_4380 IPR002575 Aminoglycoside phosphotransferase Alide_4381 IPR029028 Alpha/beta knot methyltransferases Alide_4381 IPR015947 PUA-like superfamily Alide_4381 IPR006700 Ribosomal RNA small subunit methyltransferase E Alide_4381 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Alide_4384 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4384 IPR036277 SMCs flexible hinge superfamily Alide_4384 IPR010935 SMCs flexible hinge Alide_4384 IPR003395 RecF/RecN/SMC, N-terminal Alide_4384 IPR024704 Structural maintenance of chromosomes protein Alide_4384 IPR011890 Structural maintenance of chromosomes protein, prokaryotic Alide_4386 IPR035919 EAL domain superfamily Alide_4386 IPR001633 EAL domain Alide_4386 IPR005330 MHYT domain Alide_4386 IPR029787 Nucleotide cyclase Alide_4386 IPR000160 GGDEF domain Alide_4390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_4390 IPR010233 Ubiquinone biosynthesis O-methyltransferase Alide_4390 IPR013216 Methyltransferase type 11 Alide_4391 IPR008220 Homoserine/serine acetyltransferase MetX-like Alide_4391 IPR029058 Alpha/Beta hydrolase fold Alide_4391 IPR000073 Alpha/beta hydrolase fold-1 Alide_4392 IPR001727 Gdt1 family Alide_4393 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Alide_4393 IPR000504 RNA recognition motif domain Alide_4393 IPR035979 RNA-binding domain superfamily Alide_4394 IPR000504 RNA recognition motif domain Alide_4394 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Alide_4394 IPR035979 RNA-binding domain superfamily Alide_4395 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_4395 IPR020904 Short-chain dehydrogenase/reductase, conserved site Alide_4395 IPR036291 NAD(P)-binding domain superfamily Alide_4397 IPR010023 KdsC family Alide_4397 IPR023214 HAD superfamily Alide_4397 IPR036412 HAD-like superfamily Alide_4397 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Alide_4398 IPR001347 Sugar isomerase (SIS) Alide_4398 IPR035474 KpsF-like, SIS domain Alide_4398 IPR000644 CBS domain Alide_4398 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type Alide_4399 IPR038770 Sodium/solute symporter superfamily Alide_4399 IPR006153 Cation/H+ exchanger Alide_4399 IPR036291 NAD(P)-binding domain superfamily Alide_4399 IPR006037 Regulator of K+ conductance, C-terminal Alide_4399 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily Alide_4399 IPR003148 Regulator of K+ conductance, N-terminal Alide_4400 IPR029057 Phosphoribosyltransferase-like Alide_4400 IPR000836 Phosphoribosyltransferase domain Alide_4400 IPR005764 Adenine phosphoribosyl transferase Alide_4403 IPR025867 MnmE, helical domain Alide_4403 IPR027368 tRNA modification GTPase MnmE domain 2 Alide_4403 IPR004520 tRNA modification GTPase MnmE Alide_4403 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4403 IPR006073 GTP binding domain Alide_4403 IPR005225 Small GTP-binding protein domain Alide_4403 IPR031168 TrmE-type guanine nucleotide-binding domain Alide_4403 IPR018948 GTP-binding protein TrmE, N-terminal Alide_4403 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Alide_4404 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Alide_4405 IPR006076 FAD dependent oxidoreductase Alide_4405 IPR023080 D-amino acid dehydrogenase DadA Alide_4405 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_4406 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4406 IPR036390 Winged helix DNA-binding domain superfamily Alide_4406 IPR037415 Octopine catabolism/uptake operon regulatory protein OccR, PBP2 domain Alide_4406 IPR005119 LysR, substrate-binding Alide_4406 IPR000847 Transcription regulator HTH, LysR Alide_4409 IPR005321 Peptidase S58, DmpA Alide_4409 IPR016117 ArgJ-like domain superfamily Alide_4410 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Alide_4410 IPR035906 MetI-like superfamily Alide_4410 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_4411 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Alide_4411 IPR035906 MetI-like superfamily Alide_4412 IPR000914 Solute-binding protein family 5 domain Alide_4412 IPR023765 Solute-binding protein family 5, conserved site Alide_4412 IPR039424 Solute-binding protein family 5 Alide_4412 IPR030678 Peptide/nickel binding protein, MppA-type Alide_4413 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4413 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Alide_4413 IPR017871 ABC transporter, conserved site Alide_4413 IPR003439 ABC transporter-like Alide_4413 IPR003593 AAA+ ATPase domain Alide_4414 IPR029055 Nucleophile aminohydrolases, N-terminal Alide_4414 IPR000246 Peptidase T2, asparaginase 2 Alide_4418 IPR023765 Solute-binding protein family 5, conserved site Alide_4418 IPR030678 Peptide/nickel binding protein, MppA-type Alide_4418 IPR039424 Solute-binding protein family 5 Alide_4418 IPR000914 Solute-binding protein family 5 domain Alide_4419 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 Alide_4419 IPR028053 Membrane insertase YidC, N-terminal Alide_4419 IPR019998 Membrane insertase YidC Alide_4419 IPR038210 Membrane insertase YidC, periplasmic domain Alide_4419 IPR038221 YidC, periplasmic domain superfamily Alide_4419 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Alide_4420 IPR002696 Putative membrane protein insertion efficiency factor Alide_4421 IPR020568 Ribosomal protein S5 domain 2-type fold Alide_4421 IPR000100 Ribonuclease P Alide_4421 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Alide_4422 IPR000271 Ribosomal protein L34 Alide_4422 IPR020939 Ribosomal protein L34, conserved site Alide_4424 IPR013610 Domain of unknown function DUF1738 Alide_4424 IPR041459 Polyvalent protein, metallopeptidase domain Alide_4424 IPR006171 TOPRIM domain Alide_4424 IPR034154 Archaeal primase DnaG/twinkle, TOPRIM domain Alide_4425 IPR016703 Conjugal transfer, TraD, beta/gamma-type Alide_4426 IPR003601 DNA topoisomerase, type IA, domain 2 Alide_4426 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Alide_4426 IPR000380 DNA topoisomerase, type IA Alide_4426 IPR023406 DNA topoisomerase, type IA, active site Alide_4426 IPR013497 DNA topoisomerase, type IA, central Alide_4426 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Alide_4426 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Alide_4426 IPR023405 DNA topoisomerase, type IA, core domain Alide_4426 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Alide_4426 IPR005738 DNA topoisomerase III Alide_4426 IPR034144 DNA topoisomerase 3-like, TOPRIM domain Alide_4426 IPR006171 TOPRIM domain Alide_4427 IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF Alide_4427 IPR019533 Peptidase S26 Alide_4427 IPR036286 LexA/Signal peptidase-like superfamily Alide_4428 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4428 IPR003688 Type IV secretion system protein TraG/VirD4 Alide_4429 IPR005094 Endonuclease relaxase, MobA/VirD2 Alide_4429 IPR040677 Large polyvalent protein-associated domain 7 Alide_4431 IPR035225 Protein of unknown function DUF5338 Alide_4432 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4432 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Alide_4433 IPR028140 Protein TraM Alide_4434 IPR000836 Phosphoribosyltransferase domain Alide_4434 IPR029057 Phosphoribosyltransferase-like Alide_4436 IPR021104 KfrA, N-terminal DNA-binding domain Alide_4437 IPR003115 ParB/Sulfiredoxin Alide_4437 IPR010575 KorB, C-terminal Alide_4437 IPR037048 KorB, C-terminal domain superfamily Alide_4437 IPR004437 ParB/RepB/Spo0J partition protein Alide_4437 IPR013741 Repressor KorB domain Alide_4437 IPR042075 KorB DNA-binding domain Alide_4437 IPR036086 ParB/Sulfiredoxin superfamily Alide_4437 IPR008988 Transcriptional repressor, C-terminal Alide_4438 IPR025669 AAA domain Alide_4438 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4439 IPR032428 TrfB transcriptional repressor protein Alide_4440 IPR024249 Protein of unknown function DUF2761 Alide_4441 IPR035362 Protein KleE Alide_4442 IPR024392 Protein of unknown function DUF2688 Alide_4443 IPR035338 Protein KleA/KleC Alide_4446 IPR042297 Antirestriction domain superfamily Alide_4446 IPR004914 Antirestriction protein Alide_4447 IPR002514 Transposase IS3/IS911family Alide_4447 IPR009057 Homeobox-like domain superfamily Alide_4447 IPR036388 Winged helix-like DNA-binding domain superfamily Alide_4451 IPR001584 Integrase, catalytic core Alide_4451 IPR012337 Ribonuclease H-like superfamily Alide_4452 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Alide_4452 IPR002611 IstB-like ATP-binding protein Alide_4452 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4452 IPR003593 AAA+ ATPase domain Alide_4452 IPR001270 ClpA/B family Alide_4456 IPR006118 Recombinase, conserved site Alide_4456 IPR009057 Homeobox-like domain superfamily Alide_4456 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Alide_4456 IPR006119 Resolvase, N-terminal catalytic domain Alide_4456 IPR006120 Resolvase, HTH domain Alide_4460 IPR002514 Transposase IS3/IS911family Alide_4460 IPR009057 Homeobox-like domain superfamily Alide_4462 IPR036249 Thioredoxin-like superfamily Alide_4462 IPR010987 Glutathione S-transferase, C-terminal-like Alide_4462 IPR004045 Glutathione S-transferase, N-terminal Alide_4462 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Alide_4462 IPR004046 Glutathione S-transferase, C-terminal Alide_4463 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Alide_4463 IPR009057 Homeobox-like domain superfamily Alide_4463 IPR001647 DNA-binding HTH domain, TetR-type Alide_4463 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Alide_4464 IPR036291 NAD(P)-binding domain superfamily Alide_4464 IPR002347 Short-chain dehydrogenase/reductase SDR Alide_4465 IPR010987 Glutathione S-transferase, C-terminal-like Alide_4465 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Alide_4465 IPR004045 Glutathione S-transferase, N-terminal Alide_4465 IPR004046 Glutathione S-transferase, C-terminal Alide_4465 IPR036249 Thioredoxin-like superfamily Alide_4467 IPR013766 Thioredoxin domain Alide_4467 IPR036249 Thioredoxin-like superfamily Alide_4467 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Alide_4467 IPR024706 Peroxiredoxin, AhpC-type Alide_4468 IPR004386 Toxin-antitoxin system, YafQ-like toxin Alide_4468 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Alide_4468 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Alide_4469 IPR007337 RelB antitoxin/Antitoxin DinJ Alide_4469 IPR013321 Arc-type ribbon-helix-helix Alide_4470 IPR010751 Plasmid replication initiator protein TrfA Alide_4471 IPR012340 Nucleic acid-binding, OB-fold Alide_4471 IPR000424 Primosome PriB/single-strand DNA-binding Alide_4471 IPR011344 Single-stranded DNA-binding protein Alide_4472 IPR032428 TrfB transcriptional repressor protein Alide_4473 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4473 IPR001482 Type II/IV secretion system protein Alide_4473 IPR014149 Conjugative transfer, TrbB Alide_4474 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 Alide_4475 IPR016704 Conjugal transfer, TrbD Alide_4475 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB Alide_4476 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain Alide_4476 IPR004346 CagE, TrbE, VirB component of type IV transporter system Alide_4476 IPR003593 AAA+ ATPase domain Alide_4476 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4478 IPR014142 P-type conjugative transfer protein TrbG Alide_4478 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Alide_4478 IPR033645 VirB9/CagX/TrbG, C-terminal Alide_4478 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily Alide_4480 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Alide_4480 IPR042217 Type IV secretion system, VirB10/TrbI Alide_4489 IPR006119 Resolvase, N-terminal catalytic domain Alide_4489 IPR006120 Resolvase, HTH domain Alide_4489 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Alide_4489 IPR006118 Recombinase, conserved site Alide_4489 IPR009057 Homeobox-like domain superfamily Alide_4490 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Alide_4490 IPR004386 Toxin-antitoxin system, YafQ-like toxin Alide_4490 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Alide_4491 IPR002513 Tn3 transposase DDE domain Alide_4491 IPR025296 Domain of unknown function DUF4158 Alide_4496 IPR009057 Homeobox-like domain superfamily Alide_4496 IPR006118 Recombinase, conserved site Alide_4496 IPR006120 Resolvase, HTH domain Alide_4496 IPR006119 Resolvase, N-terminal catalytic domain Alide_4496 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Alide_4497 IPR007746 Broad mercury transporter MerE Alide_4498 IPR000551 MerR-type HTH domain Alide_4498 IPR011797 Mercuric resistence transcriptional repressor protein MerD Alide_4498 IPR009061 Putative DNA-binding domain superfamily Alide_4499 IPR036188 FAD/NAD(P)-binding domain superfamily Alide_4499 IPR006121 Heavy metal-associated domain, HMA Alide_4499 IPR036163 Heavy metal-associated domain superfamily Alide_4499 IPR017969 Heavy-metal-associated, conserved site Alide_4499 IPR021179 Mercury(II) reductase Alide_4499 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I Alide_4499 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Alide_4499 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Alide_4499 IPR023753 FAD/NAD(P)-binding domain Alide_4499 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Alide_4501 IPR017969 Heavy-metal-associated, conserved site Alide_4501 IPR036163 Heavy metal-associated domain superfamily Alide_4501 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ Alide_4501 IPR006121 Heavy metal-associated domain, HMA Alide_4501 IPR011795 Mercuric transport protein periplasmic component Alide_4502 IPR003457 Mercuric transport protein MerT Alide_4503 IPR011794 Hg(II)-responsive transcriptional regulator Alide_4503 IPR009061 Putative DNA-binding domain superfamily Alide_4503 IPR000551 MerR-type HTH domain Alide_4503 IPR015358 Transcription regulator MerR, DNA binding Alide_4514 IPR009057 Homeobox-like domain superfamily Alide_4514 IPR006120 Resolvase, HTH domain Alide_4514 IPR006118 Recombinase, conserved site Alide_4514 IPR006119 Resolvase, N-terminal catalytic domain Alide_4514 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Alide_4516 IPR025669 AAA domain Alide_4516 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4520 IPR001801 Histone-like protein H-NS Alide_4520 IPR027444 Histone-like protein H-NS, C-terminal domain Alide_4527 IPR008258 Transglycosylase SLT domain 1 Alide_4527 IPR023346 Lysozyme-like domain superfamily Alide_4533 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Alide_4544 IPR010927 Type IV conjugative transfer system protein TraH Alide_4548 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Alide_4548 IPR003593 AAA+ ATPase domain Alide_4548 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4548 IPR002611 IstB-like ATP-binding protein Alide_4548 IPR001270 ClpA/B family Alide_4549 IPR017894 HTH domain, IS21 transposase-type Alide_4549 IPR001584 Integrase, catalytic core Alide_4551 IPR001584 Integrase, catalytic core Alide_4551 IPR017894 HTH domain, IS21 transposase-type Alide_4552 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4552 IPR003593 AAA+ ATPase domain Alide_4552 IPR002611 IstB-like ATP-binding protein Alide_4552 IPR001270 ClpA/B family Alide_4552 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Alide_4572 IPR011010 DNA breaking-rejoining enzyme, catalytic core Alide_4572 IPR013762 Integrase-like, catalytic domain superfamily Alide_4572 IPR002104 Integrase, catalytic domain Alide_4572 IPR010998 Integrase/recombinase, N-terminal Alide_4572 IPR004107 Integrase, SAM-like, N-terminal Alide_4572 IPR023009 Tyrosine recombinase XerC/XerD Alide_4592 IPR004291 Transposase, IS66 Alide_4592 IPR024474 Zinc-finger binding domain of transposase IS66 Alide_4592 IPR039552 Transposase IS66, C-terminal Alide_4592 IPR024463 Transposase TnpC, homeodomain Alide_4597 IPR004635 Peptidase S49, SppA Alide_4597 IPR002142 Peptidase S49 Alide_4597 IPR029045 ClpP/crotonase-like domain superfamily Alide_4597 IPR004634 Peptidase S49, protease IV Alide_4601 IPR025296 Domain of unknown function DUF4158 Alide_4601 IPR002513 Tn3 transposase DDE domain Alide_4606 IPR011008 Dimeric alpha-beta barrel Alide_4606 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase Alide_4609 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4609 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain Alide_4610 IPR009056 Cytochrome c-like domain Alide_4610 IPR036909 Cytochrome c-like domain superfamily Alide_4610 IPR002324 Cytochrome c, class ID Alide_4611 IPR019020 Cytochrome c-552/DMSO reductase-like, haem-binding domain Alide_4611 IPR017838 DMSO reductase family, type II, haem b-binding subunit Alide_4612 IPR017843 DMSO reductase family, type II, chaperone Alide_4612 IPR036411 TorD-like superfamily Alide_4612 IPR020945 DMSO/Nitrate reductase chaperone Alide_4613 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Alide_4613 IPR017839 DMSO reductase family, type II, iron-sulphur subunit Alide_4614 IPR009010 Aspartate decarboxylase-like domain superfamily Alide_4614 IPR006311 Twin-arginine translocation pathway, signal sequence Alide_4614 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Alide_4614 IPR006656 Molybdopterin oxidoreductase Alide_4614 IPR006657 Molybdopterin dinucleotide-binding domain Alide_4614 IPR037943 Nitrate reductase alpha subunit-like, MopB domain Alide_4614 IPR017840 DMSO reductase family, type II, molybdopterin subunit Alide_4615 IPR011008 Dimeric alpha-beta barrel Alide_4615 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase Alide_4619 IPR011010 DNA breaking-rejoining enzyme, catalytic core Alide_4619 IPR013762 Integrase-like, catalytic domain superfamily Alide_4619 IPR002104 Integrase, catalytic domain Alide_4619 IPR010998 Integrase/recombinase, N-terminal Alide_4619 IPR004107 Integrase, SAM-like, N-terminal Alide_4620 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Alide_4620 IPR003593 AAA+ ATPase domain Alide_4620 IPR002611 IstB-like ATP-binding protein Alide_4620 IPR027417 P-loop containing nucleoside triphosphate hydrolase Alide_4621 IPR001584 Integrase, catalytic core Alide_4621 IPR036397 Ribonuclease H superfamily Alide_4621 IPR012337 Ribonuclease H-like superfamily Alide_4621 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type Alide_4622 IPR002513 Tn3 transposase DDE domain Alide_4622 IPR025296 Domain of unknown function DUF4158 Alide_4623 IPR010998 Integrase/recombinase, N-terminal Alide_4623 IPR004107 Integrase, SAM-like, N-terminal Alide_4623 IPR011931 Tyrosine recombinase XerC Alide_4623 IPR023009 Tyrosine recombinase XerC/XerD Alide_4623 IPR013762 Integrase-like, catalytic domain superfamily Alide_4623 IPR011010 DNA breaking-rejoining enzyme, catalytic core Alide_4623 IPR002104 Integrase, catalytic domain Alide_4626 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Alide_4626 IPR002941 DNA methylase N-4/N-6 Alide_4626 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class Alide_4626 IPR041405 Type III R-M EcoP15I, C-terminal Alide_4626 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Alide_4627 IPR003477 mRNA interferase PemK-like Alide_4627 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Alide_4633 IPR002513 Tn3 transposase DDE domain Alide_4633 IPR025296 Domain of unknown function DUF4158 Alide_4635 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase Alide_4635 IPR011008 Dimeric alpha-beta barrel Alide_4638 IPR006120 Resolvase, HTH domain Alide_4638 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Alide_4638 IPR006119 Resolvase, N-terminal catalytic domain Alide_4638 IPR006118 Recombinase, conserved site Alide_4638 IPR009057 Homeobox-like domain superfamily Alide_4641 IPR025296 Domain of unknown function DUF4158 Alide_4641 IPR002513 Tn3 transposase DDE domain