locus_tag old_locus_tag gene Name start end strand product note type ID NCBI Alide_0001 Alide_0001 Alide_0001 206 1627 + chromosomal replication initiator protein DnaA TIGRFAM: chromosomal replication initiator protein DnaA~PFAM: Chromosomal replication initiator DnaA%3B Chromosomal replication initiator DnaA domain~KEGG: dia:Dtpsy_0001 chromosomal replication initiation protein~SMART: Chromosomal replication initiator DnaA domain%3B AAA ATPase gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0001 Alide_0002 Alide_0002 Alide_0002 1754 2860 + DNA polymerase III%2C beta subunit SMART: DNA polymerase III beta chain~TIGRFAM: DNA polymerase III%2C beta subunit~KEGG: dia:Dtpsy_0002 DNA polymerase III%2C beta subunit~PFAM: DNA polymerase III beta chain gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0002 Alide_0003 Alide_0003 Alide_0003 2979 5561 + DNA gyrase%2C B subunit TIGRFAM: DNA gyrase%2C B subunit~PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein%3B ATP-binding region ATPase domain protein%3B TOPRIM domain-containing protein%3B DNA gyrase subunit B domain protein~KEGG: dia:Dtpsy_0003 DNA gyrase%2C B subunit~SMART: DNA topoisomerase II%3B ATP-binding region ATPase domain protein gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0003 Alide_0004 Alide_0004 Alide_0004 5636 6049 + protein of unknown function UPF0153 PFAM: protein of unknown function UPF0153~KEGG: dia:Dtpsy_0006 protein of unknown function UPF0153 gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0004 Alide_0005 Alide_0005 Alide_0005 6074 7267 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: reh:H16_A2137 acyl-CoA transferase/carnitine dehydratase gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0005 Alide_0006 Alide_0006 Alide_0006 7277 8134 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: reh:H16_A2138 enoyl-CoA hydratase/carnithine racemase gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0006 Alide_0007 Alide_0007 Alide_0007 8188 9030 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: reh:H16_A2139 LysR family transcriptional regulator gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0007 Alide_0008 Alide_0008 Alide_0008 9027 10049 - extra-cytoplasmic solute receptor KEGG: reh:H16_A2140 extra-cytoplasmic solute receptor gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0008 Alide_0009 Alide_0009 Alide_0009 10084 11856 - protein of unknown function DUF1446 PFAM: protein of unknown function DUF1446~KEGG: reh:H16_A2141 hypothetical protein gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0009 Alide_0010 Alide_0010 Alide_0010 11853 13865 - Carbamoyl-phosphate synthase L chain ATP-binding protein PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B biotin carboxylase domain protein%3B biotin/lipoyl attachment domain-containing protein~KEGG: reh:H16_A2142 acetyl-CoA carboxylase alpha chain gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0010 Alide_0011 Alide_0011 Alide_0011 13882 15045 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: reh:H16_A2143 acyl-CoA dehydrogenase%2C long-chain specific gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0011 Alide_0012 Alide_0012 Alide_0012 15177 16787 - Methylcrotonoyl-CoA carboxylase KEGG: reh:H16_A2144 propionyl-CoA carboxylase beta chain~PFAM: carboxyl transferase gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0012 Alide_0013 Alide_0013 Alide_0013 16899 17204 - acylphosphatase PFAM: acylphosphatase~KEGG: ajs:Ajs_4152 acylphosphatase gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0013 Alide_0014 Alide_0014 Alide_0014 17232 17516 + 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein KEGG: ajs:Ajs_4153 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0014 Alide_0015 Alide_0015 Alide_0015 17834 19219 + homoserine dehydrogenase PFAM: homoserine dehydrogenase%3B homoserine dehydrogenase NAD-binding~KEGG: ajs:Ajs_4155 homoserine dehydrogenase gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0015 Alide_0016 Alide_0016 Alide_0016 19379 21553 + helicase c2 SMART: helicase c2%3B DEAD-like helicase~KEGG: ajs:Ajs_4158 ATP-dependent DNA helicase DinG gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0016 Alide_0017 Alide_0017 Alide_0017 21566 22195 + DNA-directed DNA polymerase PFAM: Exonuclease RNase T and DNA polymerase III~KEGG: ajs:Ajs_4160 DNA polymerase III%2C epsilon subunit~SMART: Exonuclease gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0017 Alide_0018 Alide_0018 Alide_0018 22262 22741 + NLP/P60 protein PFAM: NLP/P60 protein~KEGG: ajs:Ajs_0001 NLP/P60 protein gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0018 Alide_0019 Alide_0019 Alide_0019 22780 23883 + phospho-2-dehydro-3-deoxyheptonate aldolase TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase~KEGG: ajs:Ajs_0002 phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I/KDSA gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0019 Alide_0020 Alide_0020 Alide_0020 24476 28096 + diguanylate cyclase TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B GAF domain protein%3B PAS fold domain protein~KEGG: dia:Dtpsy_0021 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)~SMART: EAL domain protein%3B GGDEF domain containing protein%3B PAS domain containing protein%3B PAC repeat-containing protein%3B GAF domain protein gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0020 Alide_0021 Alide_0021 Alide_0021 28163 28966 - regulatory protein IclR KEGG: dia:Dtpsy_0022 transcriptional regulator%2C IclR family~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0021 Alide_0022 Alide_0022 Alide_0022 29153 30124 + hypothetical protein KEGG: ajs:Ajs_0005 hypothetical protein gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0022 Alide_0023 Alide_0023 Alide_0023 30135 31163 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: bpt:Bpet3280 hypothetical protein gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0023 Alide_0024 Alide_0024 Alide_0024 31168 32355 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: bpt:Bpet3281 putative acyl-CoA dehydrogenase gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0024 Alide_0025 Alide_0025 Alide_0025 32402 33367 - putative secreted protein KEGG: bpt:Bpet3282 putative secreted protein gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0025 Alide_0026 Alide_0026 Alide_0026 33405 35498 - ATP-dependent carboxylate-amine ligase domain protein ATP-grasp PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp%3B CoA-binding domain protein~KEGG: rme:Rmet_0842 CoA-binding gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0026 Alide_0027 Alide_0027 Alide_0027 35513 36313 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: rme:Rmet_0841 enoyl-CoA hydratase gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0027 Alide_0028 Alide_0028 Alide_0028 36408 37172 + regulatory protein IclR KEGG: bpt:Bpet3285 IclR family transcriptional regulator~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0028 Alide_0029 Alide_0029 Alide_0029 37432 38037 - Lipid A 3-O-deacylase-related protein PFAM: Lipid A 3-O-deacylase-related~KEGG: dia:Dtpsy_0024 hypothetical protein gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0029 Alide_0030 Alide_0030 Alide_0030 38152 38745 - hypothetical protein KEGG: ajs:Ajs_0007 hypothetical protein gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0030 Alide_0031 Alide_0031 Alide_0031 38962 39903 + exonuclease RdgC PFAM: exonuclease RdgC~KEGG: ajs:Ajs_0008 recombination associated protein gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0031 Alide_0032 Alide_0032 Alide_0032 39923 41176 + nucleoside recognition domain protein PFAM: nucleoside recognition domain protein~KEGG: ajs:Ajs_0012 nucleoside recognition domain-containing protein gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0032 Alide_0033 Alide_0033 Alide_0033 41657 41908 + hypothetical protein KEGG: dia:Dtpsy_0031 hypothetical protein gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0033 Alide_0034 Alide_0034 Alide_0034 41877 43754 - hypothetical protein KEGG: blt:Balat_0053 beta-galactosidase I gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0034 Alide_0035 Alide_0035 Alide_0035 43852 44289 - Cu(I)-responsive transcriptional regulator TIGRFAM: Cu(I)-responsive transcriptional regulator~PFAM: Transcription regulator MerR DNA binding%3B regulatory protein MerR~KEGG: dia:Dtpsy_0035 transcriptional regulator%2C MerR family~SMART: regulatory protein MerR gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0035 Alide_0036 Alide_0036 Alide_0036 44286 44483 - Heavy metal transport/detoxification protein PFAM: Heavy metal transport/detoxification protein~KEGG: dia:Dtpsy_0036 heavy metal transport/detoxification protein gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0036 Alide_0037 Alide_0037 Alide_0037 44653 46884 + heavy metal translocating P-type ATPase KEGG: dia:Dtpsy_0037 heavy metal translocating P-type ATPase~TIGRFAM: heavy metal translocating P-type ATPase%3B copper-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B Heavy metal transport/detoxification protein%3B Haloacid dehalogenase domain protein hydrolase gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0037 Alide_0038 Alide_0038 Alide_0038 47011 48660 + chemotaxis sensory transducer KEGG: ajs:Ajs_0020 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0038 Alide_0039 Alide_0039 Alide_0039 48816 51911 - heavy metal efflux pump%2C CzcA family KEGG: aav:Aave_0038 CzcA family heavy metal efflux protein~TIGRFAM: heavy metal efflux pump%2C CzcA family~PFAM: acriflavin resistance protein gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0039 Alide_0040 Alide_0040 Alide_0040 51908 53161 - efflux transporter%2C RND family%2C MFP subunit TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~KEGG: aav:Aave_0039 RND family efflux transporter MFP subunit gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0040 Alide_0041 Alide_0041 Alide_0041 53193 54434 - outer membrane efflux protein PFAM: outer membrane efflux protein~KEGG: aav:Aave_0040 outer membrane efflux protein gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0041 Alide_0042 Alide_0042 Alide_0042 54567 55292 + response regulator receiver KEGG: aav:Aave_0041 two component transcriptional regulator~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0042 Alide_0043 Alide_0043 Alide_0043 55289 56716 + ATP-binding region ATPase domain protein KEGG: aav:Aave_0042 integral membrane sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B Two-component sensor kinase domain-containing protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0043 Alide_0044 Alide_0044 Alide_0044 56742 57857 - NADH:flavin oxidoreductase/NADH oxidase PFAM: NADH:flavin oxidoreductase/NADH oxidase~KEGG: dia:Dtpsy_0040 NADH:flavin oxidoreductase/NADH oxidase gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0044 Alide_0045 Alide_0045 Alide_0045 57920 58528 - Glutathione S-transferase domain protein PFAM: Glutathione S-transferase domain~KEGG: dia:Dtpsy_0042 glutathione S-transferase domain protein gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0045 Alide_0046 Alide_0046 Alide_0046 58561 58857 - protein of unknown function UPF0153 PFAM: protein of unknown function UPF0153~KEGG: dia:Dtpsy_0043 protein of unknown function UPF0153 gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0046 Alide_0047 Alide_0047 Alide_0047 58864 59442 - NADPH-dependent FMN reductase PFAM: NADPH-dependent FMN reductase~KEGG: dia:Dtpsy_0044 NADPH-dependent FMN reductase gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0047 Alide_0048 Alide_0048 Alide_0048 59574 61553 + glucose inhibited division protein A manually curated~TIGRFAM: glucose inhibited division protein A~KEGG: dia:Dtpsy_0045 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA~PFAM: glucose-inhibited division protein A gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0048 Alide_0049 Alide_0049 Alide_0049 61537 61776 + hypothetical protein KEGG: pct:PC1_0787 hypothetical protein gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0049 Alide_0050 Alide_0050 Alide_0050 61769 62416 + methyltransferase GidB KEGG: dia:Dtpsy_0046 16S rRNA methyltransferase GidB~TIGRFAM: methyltransferase GidB~PFAM: glucose inhibited division protein gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0050 Alide_0051 Alide_0051 Alide_0051 62453 63067 + Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: dia:Dtpsy_0047 lysine exporter protein (LysE/YggA) gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0051 Alide_0052 Alide_0052 Alide_0052 63076 63846 + cobyrinic acid ac-diamide synthase KEGG: dia:Dtpsy_0048 cobyrinic acid ac-diamide synthase gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0052 Alide_0053 Alide_0053 Alide_0053 63931 64473 + protein of unknown function DUF1234 PFAM: protein of unknown function DUF1234~KEGG: ajs:Ajs_0030 hypothetical protein gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0053 Alide_0054 Alide_0054 Alide_0054 64479 65396 + parB-like partition protein TIGRFAM: parB-like partition protein~PFAM: ParB domain protein nuclease~KEGG: aav:Aave_0056 chromosome segregation DNA-binding protein~SMART: ParB domain protein nuclease gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0054 Alide_0055 Alide_0055 Alide_0055 65421 66200 + methyltransferase type 12 KEGG: ajs:Ajs_0032 methyltransferase type 12 gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0055 Alide_0056 Alide_0056 Alide_0056 66260 67300 + Peptidoglycan-binding domain 1 protein PFAM: Peptidoglycan-binding domain 1 protein~KEGG: dia:Dtpsy_0052 peptidoglycan-binding domain 1 protein gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0056 Alide_0057 Alide_0057 Alide_0057 67380 68285 - Helix-turn-helix%2C AraC domain protein SMART: Helix-turn-helix%2C AraC domain~KEGG: dia:Dtpsy_0054 transcriptional regulator%2C AraC family gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0057 Alide_0058 Alide_0058 Alide_0058 68345 69610 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: dia:Dtpsy_0055 major facilitator superfamily MFS_1 gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0058 Alide_0059 Alide_0059 Alide_0059 69612 70421 - MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel~KEGG: bpy:Bphyt_0752 MscS mechanosensitive ion channel gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0059 Alide_0060 Alide_0060 Alide_0060 70500 70595 + hypothetical protein gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0060 Alide_0061 Alide_0061 Alide_0061 70620 72044 - FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: ajs:Ajs_0040 fis family transcriptional regulator gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0061 Alide_0062 Alide_0062 Alide_0062 72821 73033 - hypothetical protein KEGG: shi:Shel_23880 hypothetical protein gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0062 Alide_0063 Alide_0063 Alide_0063 73036 73581 - phage virion morphogenesis protein KEGG: rsq:Rsph17025_2099 phage virion morphogenesis protein gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0063 Alide_0064 Alide_0064 Alide_0064 73688 74890 - head morphogenesis protein SPP1 gp7 PFAM: head morphogenesis protein SPP1 gp7~KEGG: bpt:Bpet4409 F protein (gpF) (protein GP30) gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0064 Alide_0065 Alide_0065 Alide_0065 74883 76379 - protein of unknown function DUF935 PFAM: protein of unknown function DUF935~KEGG: rsc:RCFBP_11714 hypothetical protein gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0065 Alide_0066 Alide_0066 Alide_0066 76376 77050 - hypothetical protein KEGG: rce:RC1_1112 terminase large subunit gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0066 Alide_0067 Alide_0067 Alide_0067 77062 77247 - hypothetical protein KEGG: bps:BPSL1153 hypothetical protein gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0067 Alide_0068 Alide_0068 Alide_0068 77251 77721 - hypothetical protein KEGG: cvi:CV_2153 hypothetical protein gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0068 Alide_0069 Alide_0069 Alide_0069 77965 78771 + hypothetical protein KEGG: aav:Aave_4097 hypothetical protein gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0069 Alide_0070 Alide_0070 Alide_0070 78805 79977 + hypothetical protein KEGG: pna:Pnap_2245 hypothetical protein gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0070 Alide_0071 Alide_0071 Alide_0071 79986 80393 + hypothetical protein KEGG: scl:sce2651 carbohydrate ABC transporter gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0071 Alide_0072 Alide_0072 Alide_0072 80393 80824 + hypothetical protein KEGG: aav:Aave_4094 hypothetical protein gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0072 Alide_0073 Alide_0073 Alide_0073 80835 82826 + hypothetical protein KEGG: aav:Aave_4093 hypothetical protein gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0073 Alide_0074 Alide_0074 Alide_0074 82819 83040 + hypothetical protein KEGG: pna:Pnap_2241 hypothetical protein gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0074 Alide_0075 Alide_0075 Alide_0075 83191 83982 + D12 class N6 adenine-specific DNA methyltransferase PFAM: D12 class N6 adenine-specific DNA methyltransferase~KEGG: aav:Aave_4108 D12 class N6 adenine-specific DNA methyltransferase gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0075 Alide_0076 Alide_0076 Alide_0076 84050 84145 - pseudogene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0076 Alide_0077 Alide_0077 Alide_0077 84303 84878 + ATP/cobalamin adenosyltransferase TIGRFAM: ATP/cobalamin adenosyltransferase~KEGG: dia:Dtpsy_0063 ATP/cobalamin adenosyltransferase~PFAM: cobalamin adenosyltransferase gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0077 Alide_0078 Alide_0078 Alide_0078 84939 85361 - thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: ajs:Ajs_0044 hypothetical protein gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0078 Alide_0079 Alide_0079 Alide_0079 85444 86910 - succinate CoA transferase TIGRFAM: succinate CoA transferase~KEGG: ajs:Ajs_0046 acetyl-CoA hydrolase~PFAM: acetyl-CoA hydrolase/transferase gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0079 Alide_0080 Alide_0080 Alide_0080 87122 87856 + hypothetical protein KEGG: dia:Dtpsy_0067 hypothetical protein gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0080 Alide_0081 Alide_0081 Alide_0081 87911 88816 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: rme:Rmet_5369 putative LysR family transcriptional regulator gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0081 Alide_0082 Alide_0082 Alide_0082 88941 89951 + hypothetical protein KEGG: reu:Reut_B4598 hypothetical protein gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0082 Alide_0083 Alide_0083 Alide_0083 90000 90806 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bbr:BB2766 putative short chain dehydrogenase gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0083 Alide_0084 Alide_0084 Alide_0084 90808 91569 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: vap:Vapar_0736 short-chain dehydrogenase/reductase SDR gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0084 Alide_0085 Alide_0085 Alide_0085 91601 92116 + Carboxymuconolactone decarboxylase PFAM: Carboxymuconolactone decarboxylase~KEGG: pol:Bpro_2144 carboxymuconolactone decarboxylase gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0085 Alide_0086 Alide_0086 Alide_0086 92123 93409 - uracil-xanthine permease KEGG: ajs:Ajs_0048 uracil-xanthine permease~TIGRFAM: uracil-xanthine permease~PFAM: Xanthine/uracil/vitamin C permease gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0086 Alide_0087 Alide_0087 Alide_0087 93561 94271 + methyltransferase FkbM family TIGRFAM: methyltransferase FkbM family~KEGG: sna:Snas_6312 methyltransferase FkbM family gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0087 Alide_0088 Alide_0088 Alide_0088 94398 95666 - Ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family KEGG: ajs:Ajs_0052 hypothetical protein~TIGRFAM: Ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family~PFAM: monooxygenase FAD-binding gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0088 Alide_0089 Alide_0089 Alide_0089 95836 97911 + acetoacetyl-CoA synthase KEGG: dia:Dtpsy_0074 acetoacetyl-CoA synthetase~TIGRFAM: acetoacetyl-CoA synthase~PFAM: AMP-dependent synthetase and ligase gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0089 Alide_0090 Alide_0090 Alide_0090 97943 98872 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ajs:Ajs_0055 LysR family transcriptional regulator gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0090 Alide_0091 Alide_0091 Alide_0091 98988 99974 + hypothetical protein KEGG: ajs:Ajs_0056 hypothetical protein gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0091 Alide_0092 Alide_0092 Alide_0092 100000 101157 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: ajs:Ajs_0061 acyl-CoA dehydrogenase domain-containing protein gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0092 Alide_0093 Alide_0093 Alide_0093 101177 102202 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: ajs:Ajs_0062 acyl-CoA dehydrogenase domain-containing protein gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0093 Alide_0094 Alide_0094 Alide_0094 102308 103096 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: ajs:Ajs_0063 enoyl-CoA hydratase gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0094 Alide_0095 Alide_0095 Alide_0095 103126 103749 + CDP-diacylglycerol/serine O-phosphatidyltransferase manually curated~TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase~KEGG: dia:Dtpsy_0083 CDP-diacylglycerol/serine O-phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0095 Alide_0096 Alide_0096 Alide_0096 103858 106059 + TonB-dependent siderophore receptor manually curated~TIGRFAM: TonB-dependent siderophore receptor~KEGG: neu:NE2433 TonB-dependent receptor protein~PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0096 Alide_0097 Alide_0097 Alide_0097 106062 107231 + hypothetical protein KEGG: neu:NE2432 hypothetical protein gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0097 Alide_0098 Alide_0098 Alide_0098 107228 107437 + hypothetical protein KEGG: rpt:Rpal_2080 hypothetical protein gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0098 Alide_0099 Alide_0099 Alide_0099 107604 108365 + septum site-determining protein MinC KEGG: dia:Dtpsy_0084 septum site-determining protein MinC~TIGRFAM: septum site-determining protein MinC~PFAM: Septum formation inhibitor MinC gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0099 Alide_0100 Alide_0100 Alide_0100 108420 109235 + septum site-determining protein MinD TIGRFAM: septum site-determining protein MinD~KEGG: dia:Dtpsy_0085 septum site-determining protein MinD gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0100 Alide_0101 Alide_0101 Alide_0101 109242 109511 + cell division topological specificity factor MinE KEGG: dia:Dtpsy_0086 cell division topological specificity factor MinE~TIGRFAM: cell division topological specificity factor MinE~PFAM: Septum formation topological specificity factor MinE gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0101 Alide_0102 Alide_0102 Alide_0102 109535 110473 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: pna:Pnap_1015 LysR family transcriptional regulator gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0102 Alide_0103 Alide_0103 Alide_0103 110587 111564 + hypothetical protein KEGG: pol:Bpro_4513 hypothetical protein gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0103 Alide_0104 Alide_0104 Alide_0104 111592 112755 + Mandelate racemase/muconate lactonizing protein PFAM: Mandelate racemase/muconate lactonizing protein~KEGG: mes:Meso_4537 galactonate dehydratase gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0104 Alide_0105 Alide_0105 Alide_0105 112786 113325 - flavin reductase domain protein FMN-binding protein KEGG: ajs:Ajs_0068 flavin reductase domain-containing protein~manually curated~PFAM: flavin reductase domain protein FMN-binding gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0105 Alide_0106 Alide_0106 Alide_0106 113432 114208 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: dia:Dtpsy_0088 alpha/beta hydrolase fold protein gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0106 Alide_0107 Alide_0107 Alide_0107 114282 114947 + regulatory protein TetR PFAM: regulatory protein TetR~KEGG: ajs:Ajs_0073 TetR family transcriptional regulator gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0107 Alide_0108 Alide_0108 Alide_0108 114895 115317 - UspA domain-containing protein PFAM: UspA domain-containing protein~KEGG: ajs:Ajs_0074 UspA domain-containing protein gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0108 Alide_0109 Alide_0109 Alide_0109 115419 116264 - metallophosphoesterase PFAM: metallophosphoesterase~KEGG: ajs:Ajs_0075 metallophosphoesterase gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0109 Alide_0110 Alide_0110 Alide_0110 116291 117262 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ajs:Ajs_0076 LysR family transcriptional regulator gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0110 Alide_0111 Alide_0111 Alide_0111 117388 117828 + hypothetical protein KEGG: ajs:Ajs_0077 hypothetical protein gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0111 Alide_0112 Alide_0112 Alide_0112 117968 119836 - Phosphoenolpyruvate carboxykinase (GTP) KEGG: dac:Daci_0114 phosphoenolpyruvate carboxykinase~PFAM: phosphoenolpyruvate carboxykinase (GTP) gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0112 Alide_0113 Alide_0113 Alide_0113 120176 120337 - hypothetical protein KEGG: dia:Dtpsy_0098 hypothetical protein gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0113 Alide_0114 Alide_0114 Alide_0114 120427 121626 - threonine dehydratase KEGG: dia:Dtpsy_0099 threonine dehydratase~TIGRFAM: threonine dehydratase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit%3B amino acid-binding ACT domain protein gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0114 Alide_0115 Alide_0115 Alide_0115 121729 123390 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: ajs:Ajs_0081 acyl-CoA dehydrogenase domain-containing protein gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0115 Alide_0116 Alide_0116 Alide_0116 123446 126166 - magnesium-translocating P-type ATPase KEGG: pfl:PFL_4078 magnesium-transporting ATPase MgtA~TIGRFAM: magnesium-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B cation transporting ATPase domain protein%3B Haloacid dehalogenase domain protein hydrolase gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0116 Alide_0117 Alide_0117 Alide_0117 126301 127332 - homocysteine S-methyltransferase PFAM: homocysteine S-methyltransferase~KEGG: ajs:Ajs_0083 methionine synthase (B12-dependent) gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0117 Alide_0118 Alide_0118 Alide_0118 127329 128330 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: aav:Aave_0175 LysR family transcriptional regulator gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0118 Alide_0119 Alide_0119 Alide_0119 128355 129518 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: aav:Aave_0176 acyl-CoA dehydrogenase domain-containing protein gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0119 Alide_0120 Alide_0120 Alide_0120 129515 129898 - Cupin 2 conserved barrel domain protein PFAM: Cupin 2 conserved barrel domain protein~KEGG: aav:Aave_0177 cupin 2 domain-containing protein gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0120 Alide_0121 Alide_0121 Alide_0121 129915 130880 - hypothetical protein KEGG: aav:Aave_0180 hypothetical protein gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0121 Alide_0122 Alide_0122 Alide_0122 131138 133006 + ATP-dependent DNA helicase RecQ TIGRFAM: ATP-dependent DNA helicase RecQ%3B ATP-dependent DNA helicase%2C RecQ family~PFAM: RQC domain%3B helicase domain protein%3B DEAD/DEAH box helicase domain protein%3B HRDC domain protein~KEGG: dia:Dtpsy_0103 ATP-dependent DNA helicase RecQ~SMART: helicase domain protein%3B DEAD-like helicase %3B HRDC domain protein gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0122 Alide_0123 Alide_0123 Alide_0123 133010 133690 - anaerobic ribonucleoside-triphosphate reductase activating protein KEGG: ajs:Ajs_0085 anaerobic ribonucleoside-triphosphate reductase activating protein~TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein~PFAM: Radical SAM domain protein gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0123 Alide_0124 Alide_0124 Alide_0124 133668 133868 - hypothetical protein KEGG: dia:Dtpsy_0105 hypothetical protein gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0124 Alide_0125 Alide_0125 Alide_0125 133951 135981 - anaerobic ribonucleoside-triphosphate reductase KEGG: dia:Dtpsy_0106 anaerobic ribonucleoside triphosphate reductase~TIGRFAM: anaerobic ribonucleoside-triphosphate reductase~PFAM: ATP-cone domain protein gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0125 Alide_0126 Alide_0126 Alide_0126 136106 139408 - diguanylate cyclase TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B PAS fold domain protein%3B PAS fold-4 domain protein~KEGG: ajs:Ajs_0088 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~SMART: EAL domain protein%3B GGDEF domain containing protein%3B PAC repeat-containing protein%3B PAS domain containing protein gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0126 Alide_0127 Alide_0127 Alide_0127 139694 140122 - Hemerythrin HHE cation binding domain protein PFAM: Hemerythrin HHE cation binding domain protein~KEGG: dia:Dtpsy_0108 hemerythrin HHE cation binding domain-containing protein gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0127 Alide_0128 Alide_0128 Alide_0128 140192 142501 - nitric oxide reductase large subunit KEGG: dia:Dtpsy_0109 nitric oxide reductase large subunit gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0128 Alide_0129 Alide_0129 Alide_0129 142653 144266 + sigma-54 factor interaction domain-containing protein KEGG: dia:Dtpsy_0110 anaerobic nitric oxide reductase transcription regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0129 Alide_0130 Alide_0130 Alide_0130 144319 144981 - hypothetical protein KEGG: ctt:CtCNB1_2843 hypothetical protein gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0130 Alide_0131 Alide_0131 Alide_0131 145218 146606 + L-serine dehydratase 1 TIGRFAM: L-serine dehydratase 1~KEGG: dia:Dtpsy_0112 L-serine dehydratase 1~PFAM: serine dehydratase alpha chain%3B serine dehydratase beta chain gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0131 Alide_0132 Alide_0132 Alide_0132 146738 147688 + hypothetical protein KEGG: dia:Dtpsy_0114 hypothetical protein gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0132 Alide_0133 Alide_0133 Alide_0133 147693 149267 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: ajs:Ajs_0098 AMP-dependent synthetase and ligase gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0133 Alide_0134 Alide_0134 Alide_0134 149285 150277 + hypothetical protein KEGG: ajs:Ajs_0099 hypothetical protein gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0134 Alide_0135 Alide_0135 Alide_0135 150290 150745 + thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: dia:Dtpsy_0117 thioesterase superfamily protein gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0135 Alide_0136 Alide_0136 Alide_0136 150767 151777 - hypothetical protein KEGG: dia:Dtpsy_0118 hypothetical protein gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0136 Alide_0137 Alide_0137 Alide_0137 151817 152803 - hypothetical protein KEGG: dia:Dtpsy_0119 hypothetical protein gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0137 Alide_0138 Alide_0138 Alide_0138 152836 153990 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: ajs:Ajs_0103 acyl-CoA dehydrogenase domain-containing protein gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0138 Alide_0139 Alide_0139 Alide_0139 154066 155613 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: ajs:Ajs_0104 AMP-dependent synthetase and ligase gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0139 Alide_0140 Alide_0140 Alide_0140 155819 156997 + acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~KEGG: dia:Dtpsy_0122 acetyl-CoA acetyltransferase~PFAM: Thiolase-like gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0140 Alide_0141 Alide_0141 Alide_0141 157053 157820 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: ajs:Ajs_0106 short-chain dehydrogenase/reductase SDR gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0141 Alide_0142 Alide_0142 Alide_0142 157889 158887 + hypothetical protein KEGG: dia:Dtpsy_0125 hypothetical protein gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0142 Alide_0143 Alide_0143 Alide_0143 158897 159703 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: ajs:Ajs_0109 short-chain dehydrogenase/reductase SDR gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0143 Alide_0144 Alide_0144 Alide_0144 159700 159804 + hypothetical protein gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0144 Alide_0145 Alide_0145 Alide_0145 159841 160620 + regulatory protein IclR KEGG: dia:Dtpsy_0128 transcriptional regulator%2C IclR family~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0145 Alide_0146 Alide_0146 Alide_0146 160715 161824 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: ajs:Ajs_0112 L-carnitine dehydratase/bile acid-inducible protein F gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0146 Alide_0147 Alide_0147 Alide_0147 161850 162839 - extra-cytoplasmic solute receptor KEGG: reh:H16_B1448 extra-cytoplasmic solute receptor gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0147 Alide_0148 Alide_0148 Alide_0148 162883 163299 - protein of unknown function DUF35 PFAM: protein of unknown function DUF35~KEGG: reh:H16_A2147 hypothetical protein gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0148 Alide_0149 Alide_0149 Alide_0149 163301 164461 - acetyl-CoA acetyltransferase KEGG: reh:H16_A2148 acetyl-CoA acetyltransferase gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0149 Alide_0150 Alide_0150 Alide_0150 164484 165641 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: reh:H16_A2149 acyl-CoA dehydrogenase%2C long-chain specific gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0150 Alide_0151 Alide_0151 Alide_0151 165676 167217 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: reh:H16_A2150 long-chain-fatty-acid--CoA ligase gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0151 Alide_0152 Alide_0152 Alide_0152 167204 168139 - 3-alpha%2C7-alpha%2C12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase KEGG: reh:H16_A2151 putative acyl dehydratase~PFAM: MaoC domain protein dehydratase gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0152 Alide_0153 Alide_0153 Alide_0153 168157 169080 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: reh:H16_A2152 short chain dehydrogenase gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0153 Alide_0154 Alide_0154 Alide_0154 169106 170089 - extra-cytoplasmic solute receptor KEGG: reh:H16_A2153 extra-cytoplasmic solute receptor gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0154 Alide_0155 Alide_0155 Alide_0155 170319 171104 + Transcriptional regulator IclR KEGG: reh:H16_A2154 IclR family transcriptional regulator~PFAM: Transcriptional regulator IclR %3B regulatory protein IclR~SMART: regulatory protein IclR gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0155 Alide_0156 Alide_0156 Alide_0156 171124 172380 - major facilitator superfamily MFS_1 KEGG: ajs:Ajs_0113 major facilitator superfamily transporter~manually curated~PFAM: major facilitator superfamily MFS_1 gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0156 Alide_0157 Alide_0157 Alide_0157 172421 173284 - Citryl-CoA lyase KEGG: dia:Dtpsy_0131 HpcH/HpaI aldolase~PFAM: HpcH/HpaI aldolase gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0157 Alide_0158 Alide_0158 Alide_0158 173317 175637 - pseudogene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0158 Alide_0159 Alide_0159 Alide_0159 173667 174755 - transposase IS4 family protein KEGG: ajs:Ajs_3918 transposase%2C IS4 family protein~manually curated~PFAM: transposase IS4 family protein gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0159 Alide_0160 Alide_0160 Alide_0160 175711 177096 - MmgE/PrpD family protein PFAM: MmgE/PrpD family protein~KEGG: dia:Dtpsy_0134 MmgE/PrpD family protein gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0160 Alide_0161 Alide_0161 Alide_0161 177147 178328 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: ajs:Ajs_0117 L-carnitine dehydratase/bile acid-inducible protein F gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0161 Alide_0162 Alide_0162 Alide_0162 178339 179505 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: dac:Daci_0198 acyl-CoA dehydrogenase domain-containing protein gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0162 Alide_0163 Alide_0163 Alide_0163 179579 180472 - hypothetical protein KEGG: dia:Dtpsy_0137 hypothetical protein gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0163 Alide_0164 Alide_0164 Alide_0164 180657 181574 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_0138 short-chain dehydrogenase/reductase SDR gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0164 Alide_0165 Alide_0165 Alide_0165 181578 182471 + 3-alpha%2C7-alpha%2C12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase KEGG: ajs:Ajs_0121 dehydratase~PFAM: MaoC domain protein dehydratase gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0165 Alide_0166 Alide_0166 Alide_0166 182553 183347 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: dia:Dtpsy_0140 enoyl-CoA hydratase/isomerase gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0166 Alide_0167 Alide_0167 Alide_0167 183484 184767 + acetyl-CoA hydrolase/transferase PFAM: acetyl-CoA hydrolase/transferase~KEGG: ajs:Ajs_0123 acetyl-CoA hydrolase/transferase gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0167 Alide_0168 Alide_0168 Alide_0168 184834 186042 + acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~KEGG: ajs:Ajs_0124 acetyl-CoA acetyltransferase~PFAM: Thiolase-like gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0168 Alide_0169 Alide_0169 Alide_0169 186057 186980 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dac:Daci_0188 LysR family transcriptional regulator gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0169 Alide_0170 Alide_0170 Alide_0170 187158 188342 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: dac:Daci_0189 L-carnitine dehydratase/bile acid-inducible protein F gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0170 Alide_0171 Alide_0171 Alide_0171 188357 189382 + Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: dac:Daci_0190 alcohol dehydrogenase gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0171 Alide_0172 Alide_0172 Alide_0172 189379 190404 + hypothetical protein KEGG: dac:Daci_0191 hypothetical protein gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0172 Alide_0173 Alide_0173 Alide_0173 190435 191343 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: aav:Aave_3679 LysR family transcriptional regulator gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0173 Alide_0174 Alide_0174 Alide_0174 191452 192435 + hypothetical protein KEGG: aav:Aave_3678 hypothetical protein gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0174 Alide_0175 Alide_0175 Alide_0175 192432 193631 + amidohydrolase TIGRFAM: amidohydrolase~KEGG: aav:Aave_3677 amidohydrolase~PFAM: peptidase M20%3B peptidase dimerisation domain protein gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0175 Alide_0176 Alide_0176 Alide_0176 193811 194791 + hypothetical protein KEGG: ajs:Ajs_0125 hypothetical protein gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0176 Alide_0177 Alide_0177 Alide_0177 194793 196301 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: dia:Dtpsy_0144 AMP-dependent synthetase and ligase gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0177 Alide_0178 Alide_0178 Alide_0178 196319 197302 + hypothetical protein KEGG: dia:Dtpsy_0145 hypothetical protein gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0178 Alide_0179 Alide_0179 Alide_0179 197357 198358 - extra-cytoplasmic solute receptor KEGG: reh:H16_B1474 extra-cytoplasmic solute receptor gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0179 Alide_0180 Alide_0180 Alide_0180 198379 199560 - amidohydrolase PFAM: peptidase M20%3B peptidase dimerisation domain protein~manually curated~KEGG: reu:Reut_B4300 peptidase M20D%2C amidohydrolase~TIGRFAM: amidohydrolase gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0180 Alide_0181 Alide_0181 Alide_0181 199825 200244 + protein of unknown function DUF35 PFAM: protein of unknown function DUF35~KEGG: ajs:Ajs_0128 hypothetical protein gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0181 Alide_0182 Alide_0182 Alide_0182 200241 201449 + thiolase KEGG: ajs:Ajs_0129 thiolase gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0182 Alide_0183 Alide_0183 Alide_0183 201469 202626 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: dia:Dtpsy_0148 acyl-CoA dehydrogenase domain protein gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0183 Alide_0184 Alide_0184 Alide_0184 202623 203054 + thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: dac:Daci_0175 thioesterase superfamily protein gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0184 Alide_0185 Alide_0185 Alide_0185 203051 203800 - regulatory protein IclR KEGG: vei:Veis_2216 regulatory proteins%2C IclR~PFAM: regulatory protein IclR~SMART: regulatory protein IclR gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0185 Alide_0186 Alide_0186 Alide_0186 203931 204917 + conserved hypothetical protein PFAM: Twin-arginine translocation pathway%2C signal sequence%2C subgroup~KEGG: vei:Veis_2212 hypothetical protein gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0186 Alide_0187 Alide_0187 Alide_0187 204914 205774 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: vei:Veis_2211 short-chain dehydrogenase/reductase SDR gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0187 Alide_0188 Alide_0188 Alide_0188 205774 206922 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: reu:Reut_B5206 acyl-CoA dehydrogenase%2C C-terminal:acyl-CoA dehydrogenase%2C central region:acyl-CoA dehydrogenase%2C N-terminal gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0188 Alide_0189 Alide_0189 Alide_0189 206972 208591 + Methylcrotonoyl-CoA carboxylase KEGG: reu:Reut_B4463 propionyl-CoA carboxylase~PFAM: carboxyl transferase gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0189 Alide_0190 Alide_0190 Alide_0190 208602 209765 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: reu:Reut_B4462 acyl-CoA dehydrogenase%2C C-terminal:acyl-CoA dehydrogenase%2C central region:acyl-CoA dehydrogenase%2C N-terminal gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0190 Alide_0191 Alide_0191 Alide_0191 209767 210588 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: vei:Veis_2207 enoyl-CoA hydratase/isomerase gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0191 Alide_0192 Alide_0192 Alide_0192 210602 212596 + Carbamoyl-phosphate synthase L chain ATP-binding protein PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B biotin carboxylase domain protein%3B biotin/lipoyl attachment domain-containing protein~KEGG: reu:Reut_B4460 carbamoyl-phosphate synthase subunit L gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0192 Alide_0193 Alide_0193 Alide_0193 212593 214407 + protein of unknown function DUF1446 PFAM: protein of unknown function DUF1446~KEGG: reu:Reut_B4459 hypothetical protein gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0193 Alide_0194 Alide_0194 Alide_0194 214431 215411 + hypothetical protein KEGG: reu:Reut_B4458 hypothetical protein gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0194 Alide_0195 Alide_0195 Alide_0195 215419 216639 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: vei:Veis_2206 L-carnitine dehydratase/bile acid-inducible protein F gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0195 Alide_0196 Alide_0196 Alide_0196 216685 217602 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dia:Dtpsy_0150 transcriptional regulator%2C LysR family gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0196 Alide_0197 Alide_0197 Alide_0197 217712 218989 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: dia:Dtpsy_0151 L-carnitine dehydratase/bile acid-inducible protein F gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0197 Alide_0198 Alide_0198 Alide_0198 219041 219940 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ctt:CtCNB1_0218 transcriptional regulator%2C LysR family gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0198 Alide_0199 Alide_0199 Alide_0199 220078 221091 + twin-arginine translocation pathway signal KEGG: ctt:CtCNB1_0219 twin-arginine translocation pathway signal gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0199 Alide_0200 Alide_0200 Alide_0200 221223 222413 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: ajs:Ajs_0117 L-carnitine dehydratase/bile acid-inducible protein F gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0200 Alide_0201 Alide_0201 Alide_0201 222438 223730 - Glu/Leu/Phe/Val dehydrogenase PFAM: Glu/Leu/Phe/Val dehydrogenase %3B Glu/Leu/Phe/Val dehydrogenase dimerisation region~KEGG: dia:Dtpsy_0153 Glu/Leu/Phe/Val dehydrogenase gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0201 Alide_0202 Alide_0202 Alide_0202 223917 224366 + transmembrane pair domain-containing protein PFAM: transmembrane pair domain-containing protein~KEGG: dia:Dtpsy_0156 transmembrane pair domain protein gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0202 Alide_0203 Alide_0203 Alide_0203 224413 225349 + pseudogene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0203 Alide_0204 Alide_0204 Alide_0204 225477 228212 + methionine synthase TIGRFAM: methionine synthase~KEGG: dac:Daci_0232 methionine synthase~PFAM: dihydropteroate synthase DHPS%3B Methionine synthase B12-binding module cap domain protein%3B cobalamin B12-binding domain protein%3B Vitamin B12 dependent methionine synthase activation region gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0204 Alide_0205 Alide_0205 Alide_0205 228371 231460 + CRISPR-associated protein%2C Csn1 family TIGRFAM: CRISPR-associated protein%2C Csn1 family~KEGG: vei:Veis_1230 CRISPR-associated endonuclease Csn1 family protein gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0205 Alide_0206 Alide_0206 Alide_0206 231466 232395 + CRISPR-associated protein Cas1 KEGG: vei:Veis_1231 CRISPR-associated Cas1 family protein~TIGRFAM: CRISPR-associated protein Cas1~PFAM: protein of unknown function DUF48 gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0206 Alide_0207 Alide_0207 Alide_0207 232438 232743 + CRISPR-associated protein Cas2 KEGG: vei:Veis_1232 CRISPR-associated Cas2 family protein~TIGRFAM: CRISPR-associated protein Cas2~PFAM: Virulence-associated protein D / CRISPR associated protein Cas2 gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0207 Alide_0208 Alide_0208 Alide_0208 233453 233696 - pseudogene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0208 Alide_0209 Alide_0209 Alide_0209 233693 234955 - conjugation TrbI family protein PFAM: conjugation TrbI family protein~KEGG: ajs:Ajs_2902 conjugation TrbI family protein gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0209 Alide_0210 Alide_0210 Alide_0210 234957 235937 - P-type conjugative transfer protein TrbG KEGG: ajs:Ajs_2903 conjugal transfer protein TrbG/VirB9/CagX~TIGRFAM: P-type conjugative transfer protein TrbG~PFAM: Conjugal transfer protein TrbG/VirB9/CagX gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0210 Alide_0211 Alide_0211 Alide_0211 235934 236638 - conjugal transfer protein TrbF KEGG: rpi:Rpic_2651 conjugal transfer protein TrbF gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0211 Alide_0212 Alide_0212 Alide_0212 236657 237991 - P-type conjugative transfer protein TrbL KEGG: ajs:Ajs_2905 conjugal transfer protein TrbL~TIGRFAM: P-type conjugative transfer protein TrbL~PFAM: TrbL/VirB6 plasmid conjugal transfer protein gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0212 Alide_0213 Alide_0213 Alide_0213 238004 238729 - P-type conjugative transfer protein TrbJ TIGRFAM: P-type conjugative transfer protein TrbJ~KEGG: ajs:Ajs_2907 conjugal transfer protein TrbJ gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0213 Alide_0214 Alide_0214 Alide_0214 238726 241161 - CagE%2C TrbE%2C VirB component of type IV transporter system%2C conserved region protein KEGG: ajs:Ajs_2908 conjugal transfer ATPase TrbE~PFAM: CagE%2C TrbE%2C VirB component of type IV transporter system%2C conserved region~SMART: AAA ATPase gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0214 Alide_0215 Alide_0215 Alide_0215 241171 241443 - putative conjugal transfer TrbD transmembrane protein KEGG: ajs:Ajs_2909 putative conjugal transfer TrbD transmembrane protein gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0215 Alide_0216 Alide_0216 Alide_0216 241440 241817 - Conjugal transfer protein TrbC PFAM: Conjugal transfer protein TrbC~KEGG: dac:Daci_2698 conjugal transfer protein TrbC gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0216 Alide_0217 Alide_0217 Alide_0217 241814 242848 - P-type conjugative transfer ATPase TrbB KEGG: ajs:Ajs_2911 type II secretion system protein E~TIGRFAM: P-type conjugative transfer ATPase TrbB~PFAM: type II secretion system protein E gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0217 Alide_0218 Alide_0218 Alide_0218 242845 243291 - CopG/DNA-binding domain-containing protein KEGG: ajs:Ajs_2912 CopG/DNA-binding domain-containing protein gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0218 Alide_0219 Alide_0219 Alide_0219 243288 245291 - TRAG family protein PFAM: TRAG family protein~KEGG: dac:Daci_2701 conjugal transfer coupling protein TraG gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0219 Alide_0220 Alide_0220 Alide_0220 245507 245779 - putative lipoprotein KEGG: bmj:BMULJ_00894 probable lipoprotein gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0220 Alide_0221 Alide_0221 Alide_0221 245815 246708 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: sml:Smlt1302 putative LysR family transcriptional regulator gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0221 Alide_0222 Alide_0222 Alide_0222 246778 249966 - heavy metal efflux pump%2C CzcA family KEGG: ajs:Ajs_1849 CzcA family heavy metal efflux protein~TIGRFAM: heavy metal efflux pump%2C CzcA family~PFAM: acriflavin resistance protein gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0222 Alide_0223 Alide_0223 Alide_0223 249983 251575 - efflux transporter%2C RND family%2C MFP subunit KEGG: ajs:Ajs_1848 RND family efflux transporter MFP subunit~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0223 Alide_0224 Alide_0224 Alide_0224 251578 252903 - outer membrane efflux protein PFAM: outer membrane efflux protein~KEGG: ajs:Ajs_1847 outer membrane efflux protein gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0224 Alide_0225 Alide_0225 Alide_0225 253070 253423 - hypothetical protein manually curated~KEGG: dar:Daro_2621 hypothetical protein gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0225 Alide_0226 Alide_0226 Alide_0226 253630 253965 - hypothetical protein KEGG: ajs:Ajs_2700 hypothetical protein gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0226 Alide_0227 Alide_0227 Alide_0227 254110 254796 + heavy metal response regulator TIGRFAM: heavy metal response regulator~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~KEGG: dia:Dtpsy_2215 two component heavy metal response transcriptional regulator%2C winged helix family~SMART: response regulator receiver gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0227 Alide_0228 Alide_0228 Alide_0228 254925 256115 + heavy metal sensor kinase TIGRFAM: heavy metal sensor kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: dia:Dtpsy_2216 heavy metal sensor signal transduction histidine kinase~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0228 Alide_0229 Alide_0229 Alide_0229 256151 256843 - transporter KEGG: ara:Arad_2530 transporter gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0229 Alide_0230 Alide_0230 Alide_0230 256847 257137 - hypothetical protein manually curated~KEGG: sfr:Sfri_3475 hypothetical protein gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0230 Alide_0231 Alide_0231 Alide_0231 257160 259469 - heavy metal translocating P-type ATPase KEGG: vap:Vapar_3562 heavy metal translocating P-type ATPase~TIGRFAM: heavy metal translocating P-type ATPase%3B cadmium-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B Heavy metal transport/detoxification protein%3B Haloacid dehalogenase domain protein hydrolase gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0231 Alide_0232 Alide_0232 Alide_0232 259708 260163 + Cd(II)/Pb(II)-responsive transcriptional regulator SMART: regulatory protein MerR~manually curated~TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator~KEGG: mpt:Mpe_A1657 putative transcriptional regulator~PFAM: Transcription regulator MerR DNA binding%3B regulatory protein MerR gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0232 Alide_0233 Alide_0233 Alide_0233 260164 262146 - hypothetical protein KEGG: dac:Daci_0453 hypothetical protein gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0233 Alide_0234 Alide_0234 Alide_0234 262143 262598 - hypothetical protein manually curated~KEGG: sml:Smlt1309 hypothetical protein gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0234 Alide_0235 Alide_0235 Alide_0235 262595 263194 - Peptidase S26%2C conserved region protein PFAM: Peptidase S26%2C conserved region~KEGG: dia:Dtpsy_1292 TraF peptidase. Serine peptidase. MEROPS family S26C gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0235 Alide_0236 Alide_0236 Alide_0236 263191 263736 - hypothetical protein KEGG: dia:Dtpsy_3522 hypothetical protein gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0236 Alide_0237 Alide_0237 Alide_0237 263733 264017 - hypothetical protein KEGG: aav:Aave_0688 hypothetical protein gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0237 Alide_0238 Alide_0238 Alide_0238 264014 264652 - cobyrinic acid ac-diamide synthase KEGG: tgr:Tgr7_1879 cobyrinic acid ac-diamide synthase gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0238 Alide_0239 Alide_0239 Alide_0239 264906 265739 - Replication initiator protein A PFAM: Replication initiator protein A~KEGG: dac:Daci_2721 putative replication initiator and transcription repressor protein gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0239 Alide_0240 Alide_0240 Alide_0240 265766 266047 - hypothetical protein KEGG: ajs:Ajs_2652 hypothetical protein gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0240 Alide_0241 Alide_0241 Alide_0241 266131 266904 - hypothetical protein KEGG: ajs:Ajs_2651 hypothetical protein gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0241 Alide_0242 Alide_0242 Alide_0242 267233 267583 - putative lipoprotein KEGG: dia:Dtpsy_3529 putative lipoprotein gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0242 Alide_0243 Alide_0243 Alide_0243 267842 268135 + helix-turn-helix domain protein KEGG: dia:Dtpsy_3530 transcriptional regulator%2C XRE family~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0243 Alide_0244 Alide_0244 Alide_0244 268520 268834 - protein of unknown function DUF736 PFAM: protein of unknown function DUF736~KEGG: aav:Aave_0681 hypothetical protein gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0244 Alide_0245 Alide_0245 Alide_0245 269905 270819 + putative phage associated protein KEGG: rpc:RPC_3544 putative phage associated protein gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0245 Alide_0246 Alide_0246 Alide_0246 270960 271802 + RelA/SpoT domain protein PFAM: RelA/SpoT domain protein~KEGG: rpc:RPC_3545 RelA/SpoT gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0246 Alide_0247 Alide_0247 Alide_0247 271936 272145 - hypothetical protein KEGG: dac:Daci_2732 hypothetical protein gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0247 Alide_0248 Alide_0248 Alide_0248 272208 274262 - ParB domain protein nuclease KEGG: dia:Dtpsy_3534 ParB domain protein nuclease~PFAM: ParB domain protein nuclease~SMART: ParB domain protein nuclease gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0248 Alide_0249 Alide_0249 Alide_0249 274328 275155 - hypothetical protein KEGG: ajs:Ajs_2944 hypothetical protein gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0249 Alide_0250 Alide_0250 Alide_0250 276176 276409 + hypothetical protein KEGG: hse:Hsero_2905 hypothetical protein gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0250 Alide_0251 Alide_0251 Alide_0251 276459 276767 + helix-turn-helix domain protein manually curated~PFAM: helix-turn-helix domain protein~KEGG: hse:Hsero_2904 XRE family transcription regulator protein~SMART: helix-turn-helix domain protein gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0251 Alide_0252 Alide_0252 Alide_0252 276730 277758 + retron reverse transcriptase KEGG: rme:Rmet_1473 retron reverse transcriptase gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0252 Alide_0253 Alide_0253 Alide_0253 277930 278247 - putative transcriptional regulator KEGG: ajs:Ajs_2957 putative transcriptional regulator gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0253 Alide_0254 Alide_0254 Alide_0254 278244 278573 - addiction module killer protein KEGG: bpr:GBP346_A0938 probable addiction module killer protein~TIGRFAM: addiction module killer protein~PFAM: protein of unknown function DUF891 gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0254 Alide_0255 Alide_0255 Alide_0255 278679 280043 - integrase family protein PFAM: integrase family protein~KEGG: ajs:Ajs_2959 phage integrase family protein gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0255 Alide_0256 Alide_0256 Alide_0256 284052 284594 - Shikimate kinase KEGG: dia:Dtpsy_0168 shikimate kinase~PFAM: shikimate kinase gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0256 Alide_0257 Alide_0257 Alide_0257 284700 285599 + ribonuclease BN PFAM: ribonuclease BN~KEGG: ajs:Ajs_0151 ribonuclease BN gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0257 Alide_0258 Alide_0258 Alide_0258 285725 286441 + 17 kDa surface antigen KEGG: ajs:Ajs_0152 17 kDa surface antigen gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0258 Alide_0259 Alide_0259 Alide_0259 286498 287271 - Ferredoxin--NADP(+) reductase KEGG: ajs:Ajs_0153 ferredoxin--NADP(+) reductase~PFAM: oxidoreductase FAD/NAD(P)-binding domain protein%3B Oxidoreductase FAD-binding domain protein gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0259 Alide_0260 Alide_0260 Alide_0260 287464 288660 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: dia:Dtpsy_0172 extracellular ligand-binding receptor gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0260 Alide_0261 Alide_0261 Alide_0261 288677 290575 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: ajs:Ajs_0155 inner-membrane translocator gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0261 Alide_0262 Alide_0262 Alide_0262 290572 292110 + ABC transporter related protein KEGG: vei:Veis_0860 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0262 Alide_0263 Alide_0263 Alide_0263 292258 295158 + peptidase C1A papain KEGG: kpe:KPK_1160 peptidoglycan binding domain/papain family cysteine protease~PFAM: peptidase C1A papain~SMART: peptidase C1A papain gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0263 Alide_0264 Alide_0264 Alide_0264 295191 296515 - pseudogene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0264 Alide_0265 Alide_0265 Alide_0265 296512 297043 - pseudogene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0265 Alide_0266 Alide_0266 Alide_0266 297101 298636 - Mg chelatase%2C subunit ChlI TIGRFAM: Mg chelatase%2C subunit ChlI~PFAM: magnesium chelatase ChlI subunit~KEGG: dia:Dtpsy_0179 Mg chelatase%2C subunit ChlI~SMART: AAA ATPase gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0266 Alide_0267 Alide_0267 Alide_0267 298775 299506 + Conserved hypothetical protein CHP02001 PFAM: Conserved hypothetical protein CHP02001~KEGG: dia:Dtpsy_0180 hypothetical protein gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0267 Alide_0268 Alide_0268 Alide_0268 299526 299864 + nitrogen regulatory protein P-II PFAM: nitrogen regulatory protein P-II~KEGG: aav:Aave_0233 nitrogen regulatory protein P-II gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0268 Alide_0269 Alide_0269 Alide_0269 299887 301275 + ammonium transporter KEGG: ajs:Ajs_0164 ammonium transporter~TIGRFAM: ammonium transporter~PFAM: ammonium transporter gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0269 Alide_0270 Alide_0270 Alide_0270 301369 302247 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: rme:Rmet_5424 LysR family transcriptional regulator gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0270 Alide_0271 Alide_0271 Alide_0271 302321 303196 - 2-hydroxy-3-oxopropionate reductase KEGG: rme:Rmet_4431 6-phosphogluconate dehydrogenase%2C NAD-binding~PFAM: 6-phosphogluconate dehydrogenase NAD-binding gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0271 Alide_0272 Alide_0272 Alide_0272 303193 304623 - Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: amd:AMED_3840 succinate-semialdehyde dehydrogenase (NADP+) gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0272 Alide_0273 Alide_0273 Alide_0273 304623 305603 - hypothetical protein KEGG: bbr:BB3069 hypothetical protein gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0273 Alide_0274 Alide_0274 Alide_0274 305633 306412 - beta-lactamase domain-containing protein KEGG: mrd:Mrad2831_3256 beta-lactamase domain-containing protein gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0274 Alide_0275 Alide_0275 Alide_0275 306409 307635 - UreA/short-chain amide ABC transporter KEGG: reu:Reut_B3887 UreA/short-chain amide ABC transporter gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0275 Alide_0276 Alide_0276 Alide_0276 307797 308687 - 3-hydroxyisobutyrate dehydrogenase KEGG: esa:ESA_04058 hypothetical protein~PFAM: 6-phosphogluconate dehydrogenase NAD-binding gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0276 Alide_0277 Alide_0277 Alide_0277 308684 309544 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: msm:MSMEG_2534 putative carboxylesterase protein gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0277 Alide_0278 Alide_0278 Alide_0278 309534 309884 - hypothetical protein KEGG: tcu:Tcur_0017 hypothetical protein gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0278 Alide_0279 Alide_0279 Alide_0279 309967 311034 - membrane protein AbrB duplication KEGG: vap:Vapar_4786 membrane protein AbrB duplication~TIGRFAM: membrane protein AbrB duplication~PFAM: ammonia monooxygenase gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0279 Alide_0280 Alide_0280 Alide_0280 311037 312383 - MmgE/PrpD family protein PFAM: MmgE/PrpD family protein~KEGG: vei:Veis_3318 MmgE/PrpD family protein gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0280 Alide_0281 Alide_0281 Alide_0281 312538 313692 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: rme:Rmet_5425 putative butyryl-CoA dehydrogenase gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0281 Alide_0282 Alide_0282 Alide_0282 313716 314690 + hypothetical protein KEGG: vei:Veis_3320 hypothetical protein gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0282 Alide_0283 Alide_0283 Alide_0283 314687 316762 + CoA-binding domain protein PFAM: CoA-binding domain protein~KEGG: dac:Daci_1885 CoA-binding domain-containing protein gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0283 Alide_0284 Alide_0284 Alide_0284 316836 317948 + FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: dia:Dtpsy_0184 FAD linked oxidase domain protein gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0284 Alide_0285 Alide_0285 Alide_0285 317951 318724 + protein of unknown function DUF1275 PFAM: protein of unknown function DUF1275~KEGG: dia:Dtpsy_0185 protein of unknown function DUF1275 gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0285 Alide_0286 Alide_0286 Alide_0286 318761 319999 + protein of unknown function DUF224 cysteine-rich region domain protein PFAM: protein of unknown function DUF224 cysteine-rich region domain protein~KEGG: ajs:Ajs_0168 glycolate oxidase iron-sulfur subunit gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0286 Alide_0287 Alide_0287 Alide_0287 320062 320793 + Fertility inhibition FinO-like protein PFAM: Fertility inhibition FinO-like~KEGG: dia:Dtpsy_0187 ProQ activator of osmoprotectant transporter ProP gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0287 Alide_0288 Alide_0288 Alide_0288 320851 321735 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: ajs:Ajs_0174 hypothetical protein gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0288 Alide_0289 Alide_0289 Alide_0289 321789 323066 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: dia:Dtpsy_0193 lysophospholipid transporter LplT gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0289 Alide_0290 Alide_0290 Alide_0290 323210 324304 + alanine racemase TIGRFAM: alanine racemase~KEGG: ajs:Ajs_0176 alanine racemase~PFAM: alanine racemase domain protein gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0290 Alide_0291 Alide_0291 Alide_0291 324523 325542 + Cytochrome-c peroxidase KEGG: dia:Dtpsy_0196 cytochrome-c peroxidase~PFAM: Di-haem cytochrome c peroxidase gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0291 Alide_0292 Alide_0292 Alide_0292 325622 326236 - Glutathione S-transferase domain protein PFAM: Glutathione S-transferase domain~KEGG: dia:Dtpsy_0197 glutathione S-transferase domain protein gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0292 Alide_0293 Alide_0293 Alide_0293 326367 327749 + DNA repair protein RadA KEGG: dia:Dtpsy_0199 DNA repair protein RadA~TIGRFAM: DNA repair protein RadA~SMART: AAA ATPase gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0293 Alide_0294 Alide_0294 Alide_0294 327753 328739 - hypothetical protein KEGG: rme:Rmet_1769 hypothetical protein gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0294 Alide_0295 Alide_0295 Alide_0295 328764 330188 - Amidase PFAM: Amidase~KEGG: reh:H16_A1882 Asp-tRNA Asn / Glu-tRNA Gln amidotransferase A subunit or related amidase gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0295 Alide_0296 Alide_0296 Alide_0296 330354 330770 + hypothetical protein KEGG: ajs:Ajs_0181 hypothetical protein gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0296 Alide_0297 Alide_0297 Alide_0297 330815 331753 + branched-chain amino acid aminotransferase KEGG: ajs:Ajs_0182 branched-chain amino acid aminotransferase~TIGRFAM: branched-chain amino acid aminotransferase~PFAM: aminotransferase class IV gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0297 Alide_0298 Alide_0298 Alide_0298 331761 331967 + Zinc finger%2C CHCC-type PFAM: Zinc finger%2C CHCC-type~KEGG: ajs:Ajs_0183 hypothetical protein gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0298 Alide_0299 Alide_0299 Alide_0299 332042 333394 + O-antigen polymerase PFAM: O-antigen polymerase~KEGG: ajs:Ajs_0184 O-antigen polymerase gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0299 Alide_0300 Alide_0300 Alide_0300 333387 334502 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: ajs:Ajs_0185 glycosyl transferase%2C group 1 gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0300 Alide_0301 Alide_0301 Alide_0301 334499 335545 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: ajs:Ajs_0186 glycosyl transferase family protein gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0301 Alide_0302 Alide_0302 Alide_0302 335542 336516 + hypothetical protein KEGG: ajs:Ajs_0187 hypothetical protein gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0302 Alide_0303 Alide_0303 Alide_0303 336585 337649 - 2-nitropropane dioxygenase NPD PFAM: 2-nitropropane dioxygenase NPD~KEGG: ajs:Ajs_0188 2-nitropropane dioxygenase%2C NPD gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0303 Alide_0304 Alide_0304 Alide_0304 337646 338512 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ajs:Ajs_0189 LysR family transcriptional regulator gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0304 Alide_0305 Alide_0305 Alide_0305 338568 339797 + hypothetical protein KEGG: dia:Dtpsy_0209 protein of unknown function DUF1228 gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0305 Alide_0306 Alide_0306 Alide_0306 339801 340520 - MOSC domain containing protein PFAM: MOSC domain containing protein~KEGG: dia:Dtpsy_0210 MOSC domain containing protein gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0306 Alide_0307 Alide_0307 Alide_0307 340517 341077 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~KEGG: dia:Dtpsy_0211 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0307 Alide_0308 Alide_0308 Alide_0308 341096 341590 - Activator of Hsp90 ATPase 1 family protein PFAM: Activator of Hsp90 ATPase 1 family protein~KEGG: oca:OCAR_5014 activator of HSP90 ATPase 1 family protein gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0308 Alide_0309 Alide_0309 Alide_0309 341690 342151 - MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: dac:Daci_0013 dehydratase gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0309 Alide_0310 Alide_0310 Alide_0310 342173 343144 - hypothetical protein KEGG: dac:Daci_0012 hypothetical protein gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0310 Alide_0311 Alide_0311 Alide_0311 343298 344227 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dac:Daci_0011 LysR family transcriptional regulator gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0311 Alide_0312 Alide_0312 Alide_0312 344352 345518 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: dac:Daci_0010 L-carnitine dehydratase/bile acid-inducible protein F gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0312 Alide_0313 Alide_0313 Alide_0313 345536 346747 - ATP-binding region ATPase domain protein KEGG: dia:Dtpsy_0212 histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0313 Alide_0314 Alide_0314 Alide_0314 346757 347467 - response regulator receiver KEGG: ajs:Ajs_0194 two component transcriptional regulator~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0314 Alide_0315 Alide_0315 Alide_0315 347563 348921 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: dia:Dtpsy_0214 major facilitator superfamily MFS_1 gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0315 Alide_0316 Alide_0316 Alide_0316 348931 349596 + Cupin 2 conserved barrel domain protein KEGG: dia:Dtpsy_0215 transcriptional regulator%2C AraC family~PFAM: Cupin 2 conserved barrel domain protein~SMART: Helix-turn-helix%2C AraC domain gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0316 Alide_0317 Alide_0317 Alide_0317 349710 350603 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: ajs:Ajs_0201 hypothetical protein gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0317 Alide_0318 Alide_0318 Alide_0318 350600 351454 + peptidase M48 Ste24p PFAM: peptidase M48 Ste24p~KEGG: ajs:Ajs_0203 peptidase M48%2C Ste24p gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0318 Alide_0319 Alide_0319 Alide_0319 351497 351727 - pseudogene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0319 Alide_0320 Alide_0320 Alide_0320 351732 351941 + pseudogene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0320 Alide_0321 Alide_0321 Alide_0321 352011 352766 - regulatory protein GntR HTH KEGG: ajs:Ajs_0204 GntR family transcriptional regulator~PFAM: regulatory protein GntR HTH%3B GntR domain protein~SMART: regulatory protein GntR HTH gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0321 Alide_0322 Alide_0322 Alide_0322 352768 354474 - sigma-54 factor interaction domain-containing protein KEGG: lch:Lcho_3364 putative sigma54 specific transcriptional regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B Activator of aromatic catabolism%3B 4-vinyl reductase 4VR%3B helix-turn-helix Fis-type~SMART: AAA ATPase gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0322 Alide_0323 Alide_0323 Alide_0323 354706 355017 + Phenol hydroxylase subunit PFAM: Phenol hydroxylase subunit~KEGG: avn:Avin_30760 multi-component phenol hydoxylase%2C assembly subunit%3B LapK gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0323 Alide_0324 Alide_0324 Alide_0324 355061 356053 + Phenol 2-monooxygenase KEGG: azo:azo2443 phenol hydroxylase%2C subunit P1~PFAM: methane/phenol/toluene hydroxylase gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0324 Alide_0325 Alide_0325 Alide_0325 356076 356345 + monooxygenase component MmoB/DmpM PFAM: monooxygenase component MmoB/DmpM~KEGG: azo:azo2442 phenol hydrolase%2C subunit P2 gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0325 Alide_0326 Alide_0326 Alide_0326 356371 357918 + methane/phenol/toluene hydroxylase PFAM: methane/phenol/toluene hydroxylase%3B YHS domain-containing protein~KEGG: azo:azo2441 phenol hydroxylase%2C subunit P3 gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0326 Alide_0327 Alide_0327 Alide_0327 357985 358341 + Phenol hydroxylase conserved region protein PFAM: Phenol hydroxylase conserved region~KEGG: rpf:Rpic12D_3551 phenol hydroxylase conserved region gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0327 Alide_0328 Alide_0328 Alide_0328 358412 359482 + Oxidoreductase FAD-binding domain protein PFAM: Oxidoreductase FAD-binding domain protein%3B ferredoxin%3B oxidoreductase FAD/NAD(P)-binding domain protein~KEGG: azo:azo1850 phenol 2-monooxygenase gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0328 Alide_0329 Alide_0329 Alide_0329 359496 359837 + ferredoxin PFAM: ferredoxin~KEGG: ajs:Ajs_0217 ferredoxin gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0329 Alide_0330 Alide_0330 Alide_0330 359860 360786 + catechol 2%2C3 dioxygenase KEGG: ajs:Ajs_0218 catechol 2%2C3-dioxygenase~TIGRFAM: catechol 2%2C3 dioxygenase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0330 Alide_0331 Alide_0331 Alide_0331 360786 361217 + protein of unknown function DUF336 PFAM: protein of unknown function DUF336~KEGG: ajs:Ajs_0219 hypothetical protein gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0331 Alide_0332 Alide_0332 Alide_0332 361218 361355 - pseudogene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0332 Alide_0333 Alide_0333 Alide_0333 361368 362457 - pseudogene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0333 Alide_0334 Alide_0334 Alide_0334 362556 363461 + conserved hypothetical protein KEGG: ctt:CtCNB1_3154 ZorfX gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0334 Alide_0335 Alide_0335 Alide_0335 364232 365692 + 2-hydroxymuconic semialdehyde dehydrogenase KEGG: ajs:Ajs_0220 betaine-aldehyde dehydrogenase~TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0335 Alide_0336 Alide_0336 Alide_0336 365754 366617 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: ctt:CtCNB1_3150 alpha/beta hydrolase fold protein gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0336 Alide_0337 Alide_0337 Alide_0337 366622 367404 + 2-oxopent-4-enoate hydratase TIGRFAM: 2-oxopent-4-enoate hydratase~KEGG: ajs:Ajs_0222 4-oxalocrotonate decarboxylase~PFAM: fumarylacetoacetate (FAA) hydrolase gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0337 Alide_0338 Alide_0338 Alide_0338 367423 368337 + acetaldehyde dehydrogenase (acetylating) TIGRFAM: acetaldehyde dehydrogenase (acetylating)~KEGG: ajs:Ajs_0223 acetaldehyde dehydrogenase~PFAM: Acetaldehyde dehydrogenase %3B Semialdehyde dehydrogenase NAD - binding gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0338 Alide_0339 Alide_0339 Alide_0339 368352 369389 + 4-hydroxy-2-oxovalerate aldolase KEGG: ajs:Ajs_0224 4-hydroxy-2-ketovalerate aldolase~TIGRFAM: 4-hydroxy-2-oxovalerate aldolase~PFAM: pyruvate carboxyltransferase%3B DmpG communication domain protein gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0339 Alide_0340 Alide_0340 Alide_0340 369423 370211 + 4-oxalocrotonate decarboxylase TIGRFAM: 4-oxalocrotonate decarboxylase~KEGG: ajs:Ajs_0225 4-oxalocrotonate decarboxylase~PFAM: fumarylacetoacetate (FAA) hydrolase gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0340 Alide_0341 Alide_0341 Alide_0341 370252 371220 + twin-arginine translocation pathway signal KEGG: ctt:CtCNB1_3145 twin-arginine translocation pathway signal gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0341 Alide_0342 Alide_0342 Alide_0342 371247 371438 + 4-oxalocrotonate tautomerase family enzyme KEGG: ajs:Ajs_0227 4-oxalocrotonate tautomerase~TIGRFAM: 4-oxalocrotonate tautomerase family enzyme~PFAM: 4-oxalocrotonate tautomerase gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0342 Alide_0343 Alide_0343 Alide_0343 371503 372141 - beta-lactamase domain-containing protein KEGG: ajs:Ajs_0228 beta-lactamase domain-containing protein gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0343 Alide_0344 Alide_0344 Alide_0344 372207 372959 - regulatory protein IclR KEGG: dac:Daci_4281 IclR family transcriptional regulator~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0344 Alide_0345 Alide_0345 Alide_0345 373084 374064 + hypothetical protein KEGG: dac:Daci_4280 hypothetical protein gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0345 Alide_0346 Alide_0346 Alide_0346 374072 374944 + amidohydrolase 2 PFAM: amidohydrolase 2~KEGG: dac:Daci_4279 amidohydrolase 2 gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0346 Alide_0347 Alide_0347 Alide_0347 374967 375956 + hypothetical protein KEGG: dac:Daci_4278 hypothetical protein gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0347 Alide_0348 Alide_0348 Alide_0348 375989 376675 + Dimethylmenaquinone methyltransferase PFAM: Dimethylmenaquinone methyltransferase~KEGG: dac:Daci_4277 dimethylmenaquinone methyltransferase gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0348 Alide_0349 Alide_0349 Alide_0349 376672 377589 + D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region~KEGG: vap:Vapar_5586 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0349 Alide_0350 Alide_0350 Alide_0350 377614 378603 + hypothetical protein KEGG: vap:Vapar_3894 hypothetical protein gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0350 Alide_0351 Alide_0351 Alide_0351 378950 379906 + hypothetical protein KEGG: dac:Daci_4274 hypothetical protein gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0351 Alide_0352 Alide_0352 Alide_0352 379912 380787 + amidohydrolase 2 PFAM: amidohydrolase 2~KEGG: dac:Daci_4273 amidohydrolase 2 gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0352 Alide_0353 Alide_0353 Alide_0353 380800 381717 + SMP-30/Gluconolaconase/LRE-like region-containing protein PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein~KEGG: dac:Daci_4272 SMP-30/gluconolaconase/LRE domain-containing protein gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0353 Alide_0354 Alide_0354 Alide_0354 381729 382712 - extra-cytoplasmic solute receptor KEGG: rme:Rmet_4433 extra-cytoplasmic solute receptor gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0354 Alide_0355 Alide_0355 Alide_0355 382731 383624 - 3-hydroxyisobutyrate dehydrogenase KEGG: vei:Veis_2089 6-phosphogluconate dehydrogenase%2C NAD-binding~PFAM: 6-phosphogluconate dehydrogenase NAD-binding gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0355 Alide_0356 Alide_0356 Alide_0356 383647 385098 - Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: vei:Veis_2088 betaine-aldehyde dehydrogenase gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0356 Alide_0357 Alide_0357 Alide_0357 385293 386021 - regulatory protein IclR KEGG: rme:Rmet_4432 IclR family transcriptional regulator family~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0357 Alide_0358 Alide_0358 Alide_0358 386294 386698 + hypothetical protein KEGG: tcu:Tcur_0017 hypothetical protein gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0358 Alide_0359 Alide_0359 Alide_0359 386719 387567 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: msm:MSMEG_2534 putative carboxylesterase protein gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0359 Alide_0360 Alide_0360 Alide_0360 387622 388776 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: bav:BAV0983 ABC transporter%2C substrate-binding protein gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0360 Alide_0361 Alide_0361 Alide_0361 388798 389667 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: bav:BAV0982 ABC transporter%2C permease protein gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0361 Alide_0362 Alide_0362 Alide_0362 389672 390670 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dma:DMR_11370 ABC transporter permease protein gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0362 Alide_0363 Alide_0363 Alide_0363 390667 391446 + ABC transporter related protein KEGG: pth:PTH_2348 ABC-type branched-chain amino acid transport systems%2C ATPase component~PFAM: ABC transporter related~SMART: AAA ATPase gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0363 Alide_0364 Alide_0364 Alide_0364 391433 392146 + ABC transporter related protein KEGG: oan:Oant_4420 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0364 Alide_0365 Alide_0365 Alide_0365 392149 393171 + amidohydrolase 2 PFAM: amidohydrolase 2~KEGG: bbr:BB2353 hypothetical protein gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0365 Alide_0366 Alide_0366 Alide_0366 393156 393887 - regulatory protein GntR HTH KEGG: ajs:Ajs_0229 GntR family transcriptional regulator~PFAM: regulatory protein GntR HTH%3B GntR domain protein~SMART: regulatory protein GntR HTH gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0366 Alide_0367 Alide_0367 Alide_0367 393971 395173 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: ajs:Ajs_0230 acyl-CoA dehydrogenase domain-containing protein gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0367 Alide_0368 Alide_0368 Alide_0368 395170 395943 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_0225 short-chain dehydrogenase/reductase SDR gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0368 Alide_0369 Alide_0369 Alide_0369 395940 396980 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: ajs:Ajs_0232 aminoglycoside phosphotransferase gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0369 Alide_0370 Alide_0370 Alide_0370 397078 397878 - exodeoxyribonuclease III Xth TIGRFAM: exodeoxyribonuclease III Xth%3B exodeoxyribonuclease III~KEGG: dia:Dtpsy_0227 exodeoxyribonuclease III Xth~PFAM: Endonuclease/exonuclease/phosphatase gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0370 Alide_0371 Alide_0371 Alide_0371 397889 398587 + orotate phosphoribosyltransferase TIGRFAM: orotate phosphoribosyltransferase~KEGG: dia:Dtpsy_0228 orotate phosphoribosyltransferase~PFAM: phosphoribosyltransferase gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0371 Alide_0372 Alide_0372 Alide_0372 398608 399312 + hypothetical protein KEGG: dia:Dtpsy_0229 hypothetical protein gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0372 Alide_0373 Alide_0373 Alide_0373 399381 400826 - glutamyl-tRNA(Gln) amidotransferase%2C B subunit KEGG: dac:Daci_0351 glutamyl-tRNA(Gln) amidotransferase%2C B subunit~TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C B subunit~PFAM: GatB region%3B Asn/Gln amidotransferase gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0373 Alide_0374 Alide_0374 Alide_0374 400829 402319 - glutamyl-tRNA(Gln) amidotransferase%2C A subunit KEGG: ajs:Ajs_0237 aspartyl/glutamyl-tRNA amidotransferase subunit A~TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C A subunit~PFAM: Amidase gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0374 Alide_0375 Alide_0375 Alide_0375 402316 402615 - glutamyl-tRNA(Gln) amidotransferase%2C C subunit TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C C subunit~KEGG: aav:Aave_0293 aspartyl/glutamyl-tRNA amidotransferase subunit C gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0375 Alide_0376 Alide_0376 Alide_0376 402821 403864 + cell shape determining protein%2C MreB/Mrl family KEGG: dia:Dtpsy_0233 rod shape-determining protein MreB~TIGRFAM: cell shape determining protein%2C MreB/Mrl family~PFAM: cell shape determining protein MreB/Mrl gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0376 Alide_0377 Alide_0377 Alide_0377 403894 404811 + rod shape-determining protein MreC KEGG: ajs:Ajs_0240 rod shape-determining protein MreC~TIGRFAM: rod shape-determining protein MreC~PFAM: Rod shape-determining protein MreC gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0377 Alide_0378 Alide_0378 Alide_0378 404808 405329 + rod shape-determining protein MreD KEGG: ajs:Ajs_0241 putative rod shape-determining MreD transmembrane protein~TIGRFAM: rod shape-determining protein MreD~PFAM: Rod shape-determining protein MreD gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0378 Alide_0379 Alide_0379 Alide_0379 405346 407289 + penicillin-binding protein 2 TIGRFAM: penicillin-binding protein 2~KEGG: dia:Dtpsy_0236 penicillin-binding protein 2~PFAM: penicillin-binding protein transpeptidase%3B Penicillin-binding protein dimerisation domain gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0379 Alide_0380 Alide_0380 Alide_0380 407305 408216 - arginase KEGG: dia:Dtpsy_0241 arginase~TIGRFAM: arginase~PFAM: Arginase/agmatinase/formiminoglutamase gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0380 Alide_0381 Alide_0381 Alide_0381 408230 408988 - protein of unknown function DUF81 PFAM: protein of unknown function DUF81~KEGG: aav:Aave_0304 hypothetical protein gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0381 Alide_0382 Alide_0382 Alide_0382 409235 410917 - Choline dehydrogenase KEGG: ajs:Ajs_0249 glucose-methanol-choline oxidoreductase~PFAM: glucose-methanol-choline oxidoreductase%3B GMC oxidoreductase gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0382 Alide_0383 Alide_0383 Alide_0383 411136 412302 + protein of unknown function DUF140 PFAM: protein of unknown function DUF140~KEGG: ajs:Ajs_0250 hypothetical protein gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0383 Alide_0384 Alide_0384 Alide_0384 412305 413108 + ABC transporter related protein KEGG: ajs:Ajs_0251 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0384 Alide_0385 Alide_0385 Alide_0385 413108 414085 + Mammalian cell entry related domain protein PFAM: Mammalian cell entry related domain protein~KEGG: dia:Dtpsy_0246 mammalian cell entry related domain protein gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0385 Alide_0386 Alide_0386 Alide_0386 414096 414776 + protein of unknown function DUF330 PFAM: protein of unknown function DUF330~KEGG: ajs:Ajs_0253 putative lipoprotein gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0386 Alide_0387 Alide_0387 Alide_0387 414823 415029 - pseudogene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0387 Alide_0388 Alide_0388 Alide_0388 415230 416159 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: bph:Bphy_6198 LysR family transcriptional regulator gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0388 Alide_0389 Alide_0389 Alide_0389 416240 418249 + aconitate hydratase domain-containing protein PFAM: aconitate hydratase domain-containing protein~KEGG: cti:RALTA_B0856 putative hydrolyase gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0389 Alide_0390 Alide_0390 Alide_0390 418287 419276 + hypothetical protein KEGG: cti:RALTA_B0858 conserved hypothetical protein%3B UPF0065 gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0390 Alide_0391 Alide_0391 Alide_0391 419285 419818 + regulator of ribonuclease activity A KEGG: mmi:MMAR_5403 ribonuclease activity regulator protein RraA~TIGRFAM: regulator of ribonuclease activity A~PFAM: Dimethylmenaquinone methyltransferase gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0391 Alide_0392 Alide_0392 Alide_0392 419769 420404 - multiple antibiotic resistance (MarC)-related protein PFAM: multiple antibiotic resistance (MarC)-related protein~KEGG: dia:Dtpsy_0253 multiple antibiotic resistance (MarC)-related protein gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0392 Alide_0393 Alide_0393 Alide_0393 420518 421207 + Carboxymethylenebutenolidase KEGG: dia:Dtpsy_0255 carboxymethylenebutenolidase gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0393 Alide_0394 Alide_0394 Alide_0394 421271 422839 - drug resistance transporter%2C EmrB/QacA subfamily KEGG: dia:Dtpsy_0256 drug resistance transporter%2C EmrB/QacA subfamily~TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily~PFAM: major facilitator superfamily MFS_1 gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0394 Alide_0395 Alide_0395 Alide_0395 422842 424041 - secretion protein HlyD family protein PFAM: secretion protein HlyD family protein~KEGG: ajs:Ajs_0262 secretion protein HlyD family protein gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0395 Alide_0396 Alide_0396 Alide_0396 424076 425497 - RND efflux system%2C outer membrane lipoprotein%2C NodT family KEGG: dia:Dtpsy_0258 RND efflux system%2C outer membrane lipoprotein%2C NodT family~TIGRFAM: RND efflux system%2C outer membrane lipoprotein%2C NodT family~PFAM: outer membrane efflux protein gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0396 Alide_0397 Alide_0397 Alide_0397 425527 426039 - regulatory protein MarR KEGG: ajs:Ajs_0264 MarR family transcriptional regulator~PFAM: regulatory protein MarR~SMART: regulatory protein MarR gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0397 Alide_0398 Alide_0398 Alide_0398 426111 427286 - Mg2 transporter protein CorA family protein PFAM: Mg2 transporter protein CorA family protein~KEGG: dia:Dtpsy_0260 Mg2 transporter protein CorA family protein gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0398 Alide_0399 Alide_0399 Alide_0399 427326 428354 - Porphobilinogen synthase KEGG: ajs:Ajs_0266 delta-aminolevulinic acid dehydratase~PFAM: delta-aminolevulinic acid dehydratase gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0399 Alide_0400 Alide_0400 Alide_0400 428387 429109 + biotin/lipoate A/B protein ligase PFAM: biotin/lipoate A/B protein ligase~KEGG: dia:Dtpsy_0262 biotin/lipoate A/B protein ligase gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0400 Alide_0401 Alide_0401 Alide_0401 429257 429685 + Uncharacterized protein family UPF0093 PFAM: Uncharacterised protein family UPF0093~KEGG: dia:Dtpsy_0263 hypothetical protein gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0401 Alide_0402 Alide_0402 Alide_0402 429711 430808 + VanZ family protein PFAM: VanZ family protein~KEGG: ajs:Ajs_0269 VanZ family protein gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0402 Alide_0403 Alide_0403 Alide_0403 430818 431159 + ferredoxin-like protein KEGG: dia:Dtpsy_0265 ferredoxin-like protein gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0403 Alide_0404 Alide_0404 Alide_0404 431243 431878 + putative transmembrane protein KEGG: dia:Dtpsy_0266 putative transmembrane protein gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0404 Alide_0405 Alide_0405 Alide_0405 431980 433143 + Beta-lactamase KEGG: ajs:Ajs_0272 penicillin-binding protein 6~PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1%3B Penicillin-binding protein 5 domain protein gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0405 Alide_0406 Alide_0406 Alide_0406 433245 433622 + ribosomal protein S12 KEGG: dia:Dtpsy_0268 30S ribosomal protein S12~TIGRFAM: ribosomal protein S12~PFAM: ribosomal protein S12/S23 gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0406 Alide_0407 Alide_0407 Alide_0407 433786 434259 + ribosomal protein S7 KEGG: dia:Dtpsy_0269 30S ribosomal protein S7~TIGRFAM: ribosomal protein S7~PFAM: ribosomal protein S7 gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0407 Alide_0408 Alide_0408 Alide_0408 434346 436454 + translation elongation factor G KEGG: ajs:Ajs_0275 elongation factor G~TIGRFAM: translation elongation factor G%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor G domain IV%3B elongation factor G domain-containing protein gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0408 Alide_0409 Alide_0409 Alide_0409 436688 437878 + translation elongation factor Tu KEGG: ajs:Ajs_0276 elongation factor Tu~TIGRFAM: translation elongation factor Tu%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor Tu domain-containing protein gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0409 Alide_0410 Alide_0410 Alide_0410 437906 438217 + ribosomal protein S10 KEGG: vei:Veis_1263 30S ribosomal protein S10~TIGRFAM: ribosomal protein S10~PFAM: ribosomal protein S10 gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0410 Alide_0411 Alide_0411 Alide_0411 438434 439108 + 50S ribosomal protein L3 KEGG: dia:Dtpsy_0273 50S ribosomal protein L3~TIGRFAM: 50S ribosomal protein L3~PFAM: ribosomal protein L3 gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0411 Alide_0412 Alide_0412 Alide_0412 439108 439728 + ribosomal protein L4/L1e PFAM: ribosomal protein L4/L1e~KEGG: dia:Dtpsy_0274 50S ribosomal protein L4 gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0412 Alide_0413 Alide_0413 Alide_0413 439725 440039 + Ribosomal protein L25/L23 PFAM: Ribosomal protein L25/L23~KEGG: dia:Dtpsy_0275 50S ribosomal protein L23 gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0413 Alide_0414 Alide_0414 Alide_0414 440042 440866 + ribosomal protein L2 KEGG: dia:Dtpsy_0276 50S ribosomal protein L2~TIGRFAM: ribosomal protein L2~PFAM: ribosomal protein L2 gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0414 Alide_0415 Alide_0415 Alide_0415 440877 441152 + ribosomal protein S19 KEGG: dac:Daci_0395 30S ribosomal protein S19~TIGRFAM: ribosomal protein S19~PFAM: ribosomal protein S19/S15 gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0415 Alide_0416 Alide_0416 Alide_0416 441162 441494 + ribosomal protein L22 KEGG: dac:Daci_0396 50S ribosomal protein L22~TIGRFAM: ribosomal protein L22~PFAM: ribosomal protein L22/L17 gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0416 Alide_0417 Alide_0417 Alide_0417 441512 442384 + ribosomal protein S3 TIGRFAM: ribosomal protein S3~PFAM: ribosomal protein S3- domain protein%3B Ribosomal protein S3 domain%3B KH type 2 domain protein~KEGG: aav:Aave_0344 30S ribosomal protein S3~SMART: KH domain protein gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0417 Alide_0418 Alide_0418 Alide_0418 442387 442803 + ribosomal protein L16 KEGG: dia:Dtpsy_0280 50S ribosomal protein L16~TIGRFAM: ribosomal protein L16~PFAM: Ribosomal protein L10e/L16 gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0418 Alide_0419 Alide_0419 Alide_0419 442815 443012 + ribosomal protein L29 KEGG: dia:Dtpsy_0281 50S ribosomal protein L29~TIGRFAM: ribosomal protein L29~PFAM: ribosomal protein L29 gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0419 Alide_0420 Alide_0420 Alide_0420 443026 443295 + 30S ribosomal protein S17 KEGG: dia:Dtpsy_0282 30S ribosomal protein S17~TIGRFAM: 30S ribosomal protein S17~PFAM: ribosomal protein S17 gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0420 Alide_0421 Alide_0421 Alide_0421 443375 443881 + Redoxin domain protein PFAM: Redoxin domain protein~KEGG: ajs:Ajs_0288 redoxin domain-containing protein gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0421 Alide_0422 Alide_0422 Alide_0422 443987 444481 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: dia:Dtpsy_0284 GCN5-related N-acetyltransferase gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0422 Alide_0423 Alide_0423 Alide_0423 444550 445278 - cytochrome b561 KEGG: dia:Dtpsy_0285 cytochrome b561 gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0423 Alide_0424 Alide_0424 Alide_0424 445527 446030 - Redoxin domain protein PFAM: Redoxin domain protein~KEGG: dia:Dtpsy_0287 redoxin domain protein gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0424 Alide_0425 Alide_0425 Alide_0425 446103 446753 + hypothetical protein KEGG: dia:Dtpsy_0288 hypothetical protein gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0425 Alide_0426 Alide_0426 Alide_0426 446775 447185 + PTS system fructose subfamily IIA component PFAM: PTS system fructose subfamily IIA component~KEGG: ajs:Ajs_0295 PTS system fructose subfamily IIA component gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0426 Alide_0427 Alide_0427 Alide_0427 447182 447451 + phosphocarrier%2C HPr family KEGG: dia:Dtpsy_0291 phosphocarrier%2C HPr family~TIGRFAM: phosphocarrier%2C HPr family~PFAM: phosphoryl transfer system HPr gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0427 Alide_0428 Alide_0428 Alide_0428 447470 449236 + phosphoenolpyruvate-protein phosphotransferase KEGG: ajs:Ajs_0297 phosphoenolpyruvate--protein phosphotransferase~TIGRFAM: phosphoenolpyruvate-protein phosphotransferase~PFAM: PEP-utilizing protein%3B PEP-utilising protein domain protein%3B PEP-utilising protein mobile region gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0428 Alide_0429 Alide_0429 Alide_0429 449303 450283 - lipoic acid synthetase SMART: Elongator protein 3/MiaB/NifB~TIGRFAM: lipoic acid synthetase~KEGG: dia:Dtpsy_0293 lipoyl synthase~PFAM: Radical SAM domain protein gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0429 Alide_0430 Alide_0430 Alide_0430 450301 450993 - lipoate-protein ligase B TIGRFAM: lipoate-protein ligase B~KEGG: ajs:Ajs_0299 lipoate-protein ligase B~PFAM: biotin/lipoate A/B protein ligase gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0430 Alide_0431 Alide_0431 Alide_0431 451005 451301 - protein of unknown function DUF493 PFAM: protein of unknown function DUF493~KEGG: dia:Dtpsy_0295 protein of unknown function DUF493 gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0431 Alide_0432 Alide_0432 Alide_0432 451585 451977 + ATP synthase I chain PFAM: ATP synthase I chain~KEGG: aav:Aave_0365 putative ATP synthase protein I gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0432 Alide_0433 Alide_0433 Alide_0433 452000 452863 + ATP synthase F0%2C A subunit KEGG: dia:Dtpsy_0297 F0F1 ATP synthase subunit A~TIGRFAM: ATP synthase F0%2C A subunit~PFAM: H+transporting two-sector ATPase A subunit gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0433 Alide_0434 Alide_0434 Alide_0434 452915 453163 + ATP synthase F0%2C C subunit KEGG: dac:Daci_0415 F0F1 ATP synthase subunit C~TIGRFAM: ATP synthase F0%2C C subunit~PFAM: H+transporting two-sector ATPase C subunit gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0434 Alide_0435 Alide_0435 Alide_0435 453202 453672 + ATP synthase F0%2C B subunit KEGG: dia:Dtpsy_0299 F0F1 ATP synthase subunit B~TIGRFAM: ATP synthase F0%2C B subunit~PFAM: H+transporting two-sector ATPase B/B' subunit gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0435 Alide_0436 Alide_0436 Alide_0436 453691 454233 + ATP synthase F1%2C delta subunit KEGG: dia:Dtpsy_0300 F0F1 ATP synthase subunit delta~TIGRFAM: ATP synthase F1%2C delta subunit~PFAM: H+transporting two-sector ATPase delta (OSCP) subunit gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0436 Alide_0437 Alide_0437 Alide_0437 454279 455838 + ATP synthase F1%2C alpha subunit KEGG: aav:Aave_0370 F0F1 ATP synthase subunit alpha~TIGRFAM: ATP synthase F1%2C alpha subunit~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0437 Alide_0438 Alide_0438 Alide_0438 455857 456723 + ATP synthase F1%2C gamma subunit KEGG: dia:Dtpsy_0302 F0F1 ATP synthase subunit gamma~TIGRFAM: ATP synthase F1%2C gamma subunit~PFAM: H+transporting two-sector ATPase gamma subunit gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0438 Alide_0439 Alide_0439 Alide_0439 456752 458161 + ATP synthase F1%2C beta subunit TIGRFAM: ATP synthase F1%2C beta subunit~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~KEGG: dia:Dtpsy_0303 F0F1 ATP synthase subunit beta~SMART: AAA ATPase gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0439 Alide_0440 Alide_0440 Alide_0440 458236 458652 + ATP synthase F1%2C epsilon subunit KEGG: dia:Dtpsy_0304 F0F1 ATP synthase subunit epsilon~TIGRFAM: ATP synthase F1%2C epsilon subunit~PFAM: ATPase%2C F1 complex%2C delta/epsilon subunit-like gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0440 Alide_0441 Alide_0441 Alide_0441 458735 459369 - pseudogene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0441 Alide_0442 Alide_0442 Alide_0442 459369 460290 - pseudogene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0442 Alide_0443 Alide_0443 Alide_0443 460304 460783 - pseudogene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0443 Alide_0444 Alide_0444 Alide_0444 460827 461639 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ctt:CtCNB1_2574 transcriptional regulator%2C LysR family gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0444 Alide_0445 Alide_0445 Alide_0445 461645 462178 - protein of unknown function DUF477 PFAM: protein of unknown function DUF477~KEGG: ajs:Ajs_0314 hypothetical protein gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0445 Alide_0446 Alide_0446 Alide_0446 462192 463079 - protein of unknown function DUF477 PFAM: protein of unknown function DUF477~KEGG: ajs:Ajs_0315 hypothetical protein gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0446 Alide_0447 Alide_0447 Alide_0447 463083 463688 - LemA family protein PFAM: LemA family protein~KEGG: aav:Aave_0381 LemA family protein gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0447 Alide_0448 Alide_0448 Alide_0448 463809 464276 + hypothetical protein KEGG: dia:Dtpsy_0312 hypothetical protein gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0448 Alide_0449 Alide_0449 Alide_0449 464322 464858 + hypothetical protein KEGG: ajs:Ajs_0319 hypothetical protein gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0449 Alide_0450 Alide_0450 Alide_0450 465014 465850 - cytochrome c class I PFAM: cytochrome c class I~KEGG: aav:Aave_0385 cytochrome c%2C class I gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0450 Alide_0451 Alide_0451 Alide_0451 465980 467425 - RND efflux system%2C outer membrane lipoprotein%2C NodT family KEGG: dia:Dtpsy_0316 RND efflux system%2C outer membrane lipoprotein%2C NodT family~TIGRFAM: RND efflux system%2C outer membrane lipoprotein%2C NodT family~PFAM: outer membrane efflux protein gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0451 Alide_0452 Alide_0452 Alide_0452 467450 470605 - transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family KEGG: dia:Dtpsy_0317 transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family~TIGRFAM: transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family~PFAM: acriflavin resistance protein gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0452 Alide_0453 Alide_0453 Alide_0453 470624 471904 - efflux transporter%2C RND family%2C MFP subunit KEGG: dia:Dtpsy_0318 efflux transporter%2C RND family%2C MFP subunit~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0453 Alide_0454 Alide_0454 Alide_0454 472096 472716 + regulatory protein TetR PFAM: regulatory protein TetR%3B Tetracycline transcriptional repressor MAATS-type domain-containing protein~KEGG: dia:Dtpsy_0319 transcriptional regulator%2C TetR family gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0454 Alide_0455 Alide_0455 Alide_0455 473372 474562 + translation elongation factor Tu KEGG: ajs:Ajs_0276 elongation factor Tu~TIGRFAM: translation elongation factor Tu%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor Tu domain-containing protein gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0455 Alide_0456 Alide_0456 Alide_0456 474739 475122 + preprotein translocase%2C SecE subunit KEGG: ajs:Ajs_3903 preprotein translocase subunit SecE~TIGRFAM: preprotein translocase%2C SecE subunit~PFAM: protein secE/sec61-gamma protein gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0456 Alide_0457 Alide_0457 Alide_0457 475122 475712 + transcription termination/antitermination factor NusG TIGRFAM: transcription termination/antitermination factor NusG~PFAM: NGN domain-containing protein%3B KOW domain protein~KEGG: dia:Dtpsy_3251 NusG antitermination factor~SMART: NGN domain-containing protein%3B KOW domain protein gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0457 Alide_0458 Alide_0458 Alide_0458 475844 476275 + ribosomal protein L11 TIGRFAM: ribosomal protein L11~PFAM: Ribosomal protein L11-like~KEGG: aav:Aave_4535 50S ribosomal protein L11~SMART: ribosomal protein L11 gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0458 Alide_0459 Alide_0459 Alide_0459 476276 476971 + ribosomal protein L1 KEGG: dia:Dtpsy_3249 50S ribosomal protein L1~TIGRFAM: ribosomal protein L1~PFAM: ribosomal protein L1 gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0459 Alide_0460 Alide_0460 Alide_0460 477204 477710 + ribosomal protein L10 PFAM: ribosomal protein L10~KEGG: aav:Aave_4533 50S ribosomal protein L10 gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0460 Alide_0461 Alide_0461 Alide_0461 477765 478145 + ribosomal protein L7/L12 KEGG: dia:Dtpsy_3247 50S ribosomal protein L7/L12~TIGRFAM: ribosomal protein L7/L12~PFAM: Ribosomal protein L7/L12 %3B ribosomal protein 60S gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0461 Alide_0462 Alide_0462 Alide_0462 478420 482544 + DNA-directed RNA polymerase%2C beta subunit KEGG: aav:Aave_4531 DNA-directed RNA polymerase subunit beta~TIGRFAM: DNA-directed RNA polymerase%2C beta subunit~PFAM: RNA polymerase Rpb2 domain 6%3B RNA polymerase Rpb2 domain 3%3B RNA polymerase beta subunit%3B RNA polymerase Rpb2 domain 2%3B DNA-directed RNA polymerase%2C beta subunit%2C external 1 domain%3B RNA polymerase Rpb2 domain 7 gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0462 Alide_0463 Alide_0463 Alide_0463 482565 486794 + DNA-directed RNA polymerase%2C beta' subunit TIGRFAM: DNA-directed RNA polymerase%2C beta' subunit~PFAM: RNA polymerase Rpb1 domain 1%3B RNA polymerase alpha subunit%3B RNA polymerase Rpb1 domain 3%3B RNA polymerase Rpb1 domain 4%3B RNA polymerase Rpb1 domain 5~KEGG: dia:Dtpsy_3245 DNA-directed RNA polymerase subunit beta'~SMART: RNA polymerase I subunit A domain protein gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0463 Alide_0464 Alide_0464 Alide_0464 486914 487480 + hypothetical protein KEGG: dia:Dtpsy_3244 hypothetical protein gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0464 Alide_0465 Alide_0465 Alide_0465 487477 488844 + sun protein KEGG: dia:Dtpsy_3243 sun protein~TIGRFAM: sun protein~PFAM: Fmu (Sun) domain protein gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0465 Alide_0466 Alide_0466 Alide_0466 488888 489469 + hypothetical protein KEGG: ajs:Ajs_3893 hypothetical protein gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0466 Alide_0467 Alide_0467 Alide_0467 489466 491754 + ATP-binding region ATPase domain protein KEGG: ajs:Ajs_3892 multi-sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein%3B PAS fold-4 domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein%3B PAS domain containing protein gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0467 Alide_0468 Alide_0468 Alide_0468 491794 492489 + response regulator receiver KEGG: dia:Dtpsy_3240 two component transcriptional regulator%2C fis family~PFAM: response regulator receiver%3B helix-turn-helix Fis-type~SMART: response regulator receiver gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0468 Alide_0469 Alide_0469 Alide_0469 492890 493840 - hypothetical protein KEGG: dia:Dtpsy_3238 hypothetical protein gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0469 Alide_0470 Alide_0470 Alide_0470 493844 495079 - hypothetical protein KEGG: dia:Dtpsy_3237 hypothetical protein gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0470 Alide_0471 Alide_0471 Alide_0471 495325 495654 + helix-turn-helix domain protein KEGG: dia:Dtpsy_3236 transcriptional regulator%2C XRE family~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0471 Alide_0472 Alide_0472 Alide_0472 495668 496597 + protein of unknown function DUF955 PFAM: protein of unknown function DUF955~KEGG: dia:Dtpsy_3235 protein of unknown function DUF955 gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0472 Alide_0473 Alide_0473 Alide_0473 496744 498270 + Integrase catalytic region protein PFAM: Integrase catalytic region%3B regulatory protein MerR~KEGG: ctt:CtCNB1_2459 IstA gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0473 Alide_0474 Alide_0474 Alide_0474 498260 499063 + IstB domain protein ATP-binding protein KEGG: ctt:CtCNB1_3734 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0474 Alide_0475 Alide_0475 Alide_0475 499095 499874 + protein of unknown function DUF955 KEGG: bbr:BB2493 putative phage-related DNA-binding protein~manually curated~PFAM: protein of unknown function DUF955 gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0475 Alide_0476 Alide_0476 Alide_0476 499891 500139 + hypothetical protein KEGG: ppg:PputGB1_4812 hypothetical protein gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0476 Alide_0477 Alide_0477 Alide_0477 500160 500621 + hypothetical protein KEGG: sbn:Sbal195_1558 hypothetical protein gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0477 Alide_0478 Alide_0478 Alide_0478 500766 502439 + CMP/dCMP deaminase zinc-binding protein PFAM: CMP/dCMP deaminase zinc-binding~KEGG: bpy:Bphyt_3723 CMP/dCMP deaminase zinc-binding gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0478 Alide_0479 Alide_0479 Alide_0479 503252 503596 - pseudogene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0479 Alide_0480 Alide_0480 Alide_0480 503638 503889 + pseudogene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0480 Alide_0481 Alide_0481 Alide_0481 503904 505244 - nucleotide sugar dehydrogenase TIGRFAM: nucleotide sugar dehydrogenase~KEGG: dia:Dtpsy_0400 nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%3B UDP-glucose/GDP-mannose dehydrogenase dimerisation%3B UDP-glucose/GDP-mannose dehydrogenase gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0481 Alide_0482 Alide_0482 Alide_0482 505241 506251 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase~KEGG: dia:Dtpsy_0401 NAD-dependent epimerase/dehydratase gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0482 Alide_0483 Alide_0483 Alide_0483 506248 507765 - glycosyltransferase KEGG: dia:Dtpsy_0402 glycosyltransferase gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0483 Alide_0484 Alide_0484 Alide_0484 507869 508900 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: ajs:Ajs_0411 glycosyl transferase family protein gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0484 Alide_0485 Alide_0485 Alide_0485 508897 509826 + hypothetical protein KEGG: ajs:Ajs_0412 hypothetical protein gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0485 Alide_0486 Alide_0486 Alide_0486 510032 510946 - Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~KEGG: dia:Dtpsy_0405 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0486 Alide_0487 Alide_0487 Alide_0487 510970 511368 + Uncharacterized protein family UPF0102 PFAM: Uncharacterised protein family UPF0102~KEGG: ajs:Ajs_0414 hypothetical protein gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0487 Alide_0488 Alide_0488 Alide_0488 511429 512031 + phosphoheptose isomerase KEGG: dia:Dtpsy_0407 phosphoheptose isomerase gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0488 Alide_0489 Alide_0489 Alide_0489 512028 512693 + transport-associated protein KEGG: ajs:Ajs_0416 transport-associated~PFAM: transport-associated~SMART: Transport-associated and nodulation region gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0489 Alide_0490 Alide_0490 Alide_0490 512722 513654 - 2-hydroxy-3-oxopropionate reductase KEGG: dia:Dtpsy_0409 3-hydroxyisobutyrate dehydrogenase~PFAM: 6-phosphogluconate dehydrogenase NAD-binding gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0490 Alide_0491 Alide_0491 Alide_0491 513735 514871 - twitching motility protein KEGG: ajs:Ajs_0418 twitching motility protein~TIGRFAM: twitching motility protein~PFAM: type II secretion system protein E gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0491 Alide_0492 Alide_0492 Alide_0492 514897 515526 - cyclic nucleotide-binding protein KEGG: dia:Dtpsy_0411 cyclic nucleotide-binding protein~PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0492 Alide_0493 Alide_0493 Alide_0493 515591 516634 - twitching motility protein KEGG: aav:Aave_0637 twitching motility protein~TIGRFAM: twitching motility protein~PFAM: type II secretion system protein E gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0493 Alide_0494 Alide_0494 Alide_0494 516674 517396 + alanine racemase domain protein PFAM: alanine racemase domain protein~KEGG: dac:Daci_1069 alanine racemase domain-containing protein gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0494 Alide_0495 Alide_0495 Alide_0495 517437 518567 + aminotransferase class V PFAM: aminotransferase class V~KEGG: dia:Dtpsy_0414 aminotransferase class V gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0495 Alide_0496 Alide_0496 Alide_0496 518628 519050 - hypothetical protein manually curated~KEGG: aav:Aave_0642 hypothetical protein gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0496 Alide_0497 Alide_0497 Alide_0497 519235 520536 + protein of unknown function DUF445 PFAM: protein of unknown function DUF445~KEGG: ajs:Ajs_0423 hypothetical protein gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0497 Alide_0498 Alide_0498 Alide_0498 520594 522087 - FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: dia:Dtpsy_0417 FAD linked oxidase domain protein gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0498 Alide_0499 Alide_0499 Alide_0499 522154 523050 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dia:Dtpsy_0418 transcriptional regulator%2C LysR family gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0499 Alide_0500 Alide_0500 Alide_0500 523050 523898 - formyltetrahydrofolate deformylase KEGG: dia:Dtpsy_0419 formyltetrahydrofolate deformylase~TIGRFAM: formyltetrahydrofolate deformylase~PFAM: formyl transferase domain protein%3B amino acid-binding ACT domain protein gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0500 Alide_0501 Alide_0501 Alide_0501 523944 526610 + diguanylate cyclase TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B PAS fold domain protein%3B PAS fold-3 domain protein%3B PAS fold-4 domain protein~KEGG: ctt:CtCNB1_4372 diguanylate cyclase/phosphodiesterase with~SMART: EAL domain protein%3B GGDEF domain containing protein%3B PAS domain containing protein%3B PAC repeat-containing protein gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0501 Alide_0502 Alide_0502 Alide_0502 526611 527471 - protein of unknown function DUF399 PFAM: protein of unknown function DUF399~KEGG: ajs:Ajs_0430 hypothetical protein gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0502 Alide_0503 Alide_0503 Alide_0503 527738 530173 + ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent KEGG: ajs:Ajs_0431 ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent~TIGRFAM: ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent~PFAM: ribonucleotide reductase large subunit%3B Ribonucleotide reductase large subunit domain protein gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0503 Alide_0504 Alide_0504 Alide_0504 530352 532268 + ATP-binding region ATPase domain protein KEGG: dia:Dtpsy_0423 GAF sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase dimerisation and phosphoacceptor region%3B histidine kinase HAMP region domain protein%3B GAF domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0504 Alide_0505 Alide_0505 Alide_0505 532265 532939 + response regulator receiver KEGG: dia:Dtpsy_0424 two component transcriptional regulator%2C LuxR family~PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: regulatory protein LuxR%3B response regulator receiver gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0505 Alide_0506 Alide_0506 Alide_0506 533168 534463 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ajs:Ajs_0434 major facilitator superfamily transporter gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0506 Alide_0507 Alide_0507 Alide_0507 534482 535927 + nitrite transporter KEGG: dia:Dtpsy_0426 nitrite transporter~TIGRFAM: nitrite transporter~PFAM: major facilitator superfamily MFS_1 gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0507 Alide_0508 Alide_0508 Alide_0508 535964 539758 + nitrate reductase%2C alpha subunit KEGG: ajs:Ajs_0436 respiratory nitrate reductase alpha subunit apoprotein~TIGRFAM: nitrate reductase%2C alpha subunit~PFAM: molybdopterin oxidoreductase%3B molydopterin dinucleotide-binding region gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0508 Alide_0509 Alide_0509 Alide_0509 539777 541300 + nitrate reductase%2C beta subunit TIGRFAM: nitrate reductase%2C beta subunit~KEGG: dia:Dtpsy_0428 nitrate reductase%2C beta subunit gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0509 Alide_0510 Alide_0510 Alide_0510 541312 542013 + nitrate reductase molybdenum cofactor assembly chaperone TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone~KEGG: dia:Dtpsy_0429 nitrate reductase molybdenum cofactor assembly chaperone~PFAM: TorD-like chaperone gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0510 Alide_0511 Alide_0511 Alide_0511 542010 542738 + respiratory nitrate reductase%2C gamma subunit TIGRFAM: respiratory nitrate reductase%2C gamma subunit~KEGG: dia:Dtpsy_0430 respiratory nitrate reductase%2C gamma subunit~PFAM: Nitrate reductase gamma subunit gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0511 Alide_0512 Alide_0512 Alide_0512 542866 543693 + PpiC-type peptidyl-prolyl cis-trans isomerase PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase~KEGG: dia:Dtpsy_0431 PpiC-type peptidyl-prolyl cis-trans isomerase gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0512 Alide_0513 Alide_0513 Alide_0513 543728 544405 + Carbonate dehydratase KEGG: dia:Dtpsy_0432 carbonate dehydratase~PFAM: carbonic anhydrase gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0513 Alide_0514 Alide_0514 Alide_0514 544405 545055 + nitroreductase PFAM: nitroreductase~KEGG: dia:Dtpsy_0434 nitroreductase gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0514 Alide_0515 Alide_0515 Alide_0515 545052 545471 + hypothetical protein KEGG: dia:Dtpsy_0435 hypothetical protein gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0515 Alide_0516 Alide_0516 Alide_0516 545525 546073 + Hemerythrin HHE cation binding domain protein PFAM: Hemerythrin HHE cation binding domain protein~KEGG: dia:Dtpsy_0436 hemerythrin HHE cation binding domain protein gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0516 Alide_0517 Alide_0517 Alide_0517 546263 546550 - hypothetical protein KEGG: ajs:Ajs_0446 hypothetical protein gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0517 Alide_0518 Alide_0518 Alide_0518 546684 547835 - hypothetical protein KEGG: dia:Dtpsy_0438 hypothetical protein gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0518 Alide_0519 Alide_0519 Alide_0519 548017 549006 + fumarylacetoacetate (FAA) hydrolase PFAM: fumarylacetoacetate (FAA) hydrolase~KEGG: ajs:Ajs_0449 fumarylacetoacetate (FAA) hydrolase gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0519 Alide_0520 Alide_0520 Alide_0520 549163 551367 + Tetratricopeptide TPR_1 repeat-containing protein KEGG: cph:Cpha266_1840 TPR repeat-containing protein~PFAM: Tetratricopeptide TPR_1 repeat-containing protein~SMART: Tetratricopeptide repeat gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0520 Alide_0521 Alide_0521 Alide_0521 551428 553503 - molybdopterin dinucleotide-binding region protein PFAM: molydopterin dinucleotide-binding region%3B molybdopterin oxidoreductase Fe4S4 region%3B molybdopterin oxidoreductase~KEGG: ajs:Ajs_0451 molybdopterin oxidoreductase gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0521 Alide_0522 Alide_0522 Alide_0522 553624 554655 - hypothetical protein KEGG: vei:Veis_1579 hypothetical protein gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0522 Alide_0523 Alide_0523 Alide_0523 554696 555604 - Citryl-CoA lyase KEGG: cti:RALTA_B1739 putative citrate lyase/aldolase~PFAM: HpcH/HpaI aldolase gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0523 Alide_0524 Alide_0524 Alide_0524 555620 556852 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: vei:Veis_1581 formyl-CoA transferase gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0524 Alide_0525 Alide_0525 Alide_0525 556849 557352 - hypothetical protein KEGG: cti:RALTA_B1741 hypothetical protein gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0525 Alide_0526 Alide_0526 Alide_0526 557349 558599 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: cti:RALTA_B1742 putative acyl CoA dehydrogenase oxidoreductase protein gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0526 Alide_0527 Alide_0527 Alide_0527 558604 559107 - MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: cti:RALTA_B1743 hypothetical protein gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0527 Alide_0528 Alide_0528 Alide_0528 559104 560483 - MmgE/PrpD family protein PFAM: MmgE/PrpD family protein~KEGG: vei:Veis_1585 MmgE/PrpD family protein gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0528 Alide_0529 Alide_0529 Alide_0529 560689 561564 + Citryl-CoA lyase KEGG: xau:Xaut_1974 citryl-CoA lyase~PFAM: HpcH/HpaI aldolase gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0529 Alide_0530 Alide_0530 Alide_0530 561571 562329 + regulatory protein IclR PFAM: regulatory protein IclR~KEGG: rcu:RCOM_0002820 Transcriptional regulator kdgR%2C putative gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0530 Alide_0531 Alide_0531 Alide_0531 562431 563636 + amidohydrolase TIGRFAM: amidohydrolase~KEGG: dia:Dtpsy_0444 amidohydrolase~PFAM: peptidase M20%3B peptidase dimerisation domain protein gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0531 Alide_0532 Alide_0532 Alide_0532 563705 563962 + acyl-coA-binding protein ACBP PFAM: acyl-coA-binding protein ACBP~KEGG: dia:Dtpsy_0446 acyl-coA-binding protein ACBP gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0532 Alide_0533 Alide_0533 Alide_0533 563965 565068 - aminopeptidase PFAM: aminopeptidase~KEGG: dia:Dtpsy_0447 putative zinc protease protein gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0533 Alide_0534 Alide_0534 Alide_0534 565075 565734 + DNA-3-methyladenine glycosylase I KEGG: ajs:Ajs_0457 DNA-3-methyladenine glycosylase I~PFAM: methyladenine glycosylase gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0534 Alide_0535 Alide_0535 Alide_0535 565868 566029 - hypothetical protein KEGG: dia:Dtpsy_0450 hypothetical protein gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0535 Alide_0536 Alide_0536 Alide_0536 566310 567608 + Cyclopropane-fatty-acyl-phospholipid synthase KEGG: ajs:Ajs_0460 cyclopropane-fatty-acyl-phospholipid synthase~PFAM: Cyclopropane-fatty-acyl-phospholipid synthase gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0536 Alide_0537 Alide_0537 Alide_0537 567630 567950 + Domain of unknown function DUF1840 PFAM: Domain of unknown function DUF1840~KEGG: dia:Dtpsy_0452 hypothetical protein gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0537 Alide_0538 Alide_0538 Alide_0538 567973 568989 - hypothetical protein KEGG: ajs:Ajs_0462 hypothetical protein gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0538 Alide_0539 Alide_0539 Alide_0539 569132 570121 - hypothetical protein KEGG: vap:Vapar_5015 hypothetical protein gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0539 Alide_0540 Alide_0540 Alide_0540 570248 571495 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: dia:Dtpsy_0455 putative phenylacetate-CoA ligase gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0540 Alide_0541 Alide_0541 Alide_0541 571586 572428 - ABC transporter related protein KEGG: ctt:CtCNB1_4329 high-affinity branched-chain amino acid transport ATP-binding protein LivF~PFAM: ABC transporter related~SMART: AAA ATPase gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0541 Alide_0542 Alide_0542 Alide_0542 572568 573881 - hypothetical protein KEGG: dac:Daci_1155 hypothetical protein gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0542 Alide_0543 Alide_0543 Alide_0543 573940 575004 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: ctt:CtCNB1_4327 membrane protein gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0543 Alide_0544 Alide_0544 Alide_0544 575026 575955 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: ctt:CtCNB1_4326 high-affinity branched-chain amino acidtransport system permease protein LivH gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0544 Alide_0545 Alide_0545 Alide_0545 575976 576761 - ABC transporter related protein KEGG: dac:Daci_1158 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0545 Alide_0546 Alide_0546 Alide_0546 576780 578711 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: ajs:Ajs_0470 AMP-dependent synthetase and ligase gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0546 Alide_0547 Alide_0547 Alide_0547 578932 580623 + Peptidoglycan-binding domain 1 protein KEGG: dia:Dtpsy_0462 peptidoglycan-binding domain 1 protein~PFAM: Peptidoglycan-binding domain 1 protein~SMART: AAA ATPase gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0547 Alide_0548 Alide_0548 Alide_0548 580628 581332 + hypothetical protein KEGG: ajs:Ajs_0472 hypothetical protein gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0548 Alide_0549 Alide_0549 Alide_0549 581462 582253 + cyclic nucleotide-binding protein KEGG: ajs:Ajs_0473 Crp/FNR family transcriptional regulator~PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding%3B regulatory protein Crp gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0549 Alide_0550 Alide_0550 Alide_0550 582292 583212 + RNA-binding S4 domain protein KEGG: ajs:Ajs_0474 RNA-binding S4 domain-containing protein~PFAM: RNA-binding S4 domain protein%3B pseudouridine synthase~SMART: RNA-binding S4 domain protein gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0550 Alide_0551 Alide_0551 Alide_0551 583310 585271 + Heat shock protein Hsp90-like protein KEGG: dia:Dtpsy_0466 heat shock protein 90~PFAM: Heat shock protein Hsp90-like%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0551 Alide_0552 Alide_0552 Alide_0552 585304 585789 + hypothetical protein KEGG: dac:Daci_1191 hypothetical protein gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0552 Alide_0553 Alide_0553 Alide_0553 585882 586862 + hypothetical protein KEGG: dia:Dtpsy_0467 hypothetical protein gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0553 Alide_0554 Alide_0554 Alide_0554 586863 587906 - aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: ajs:Ajs_0479 serine/threonine protein kinase gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0554 Alide_0555 Alide_0555 Alide_0555 587929 589377 - Serine/threonine-protein kinase-like domain protein KEGG: dia:Dtpsy_0471 serine/threonine protein kinase~PFAM: Serine/threonine-protein kinase-like domain%3B UspA domain-containing protein~SMART: serine/threonine protein kinase%3B Tyrosine-protein kinase%2C catalytic domain gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0555 Alide_0556 Alide_0556 Alide_0556 589381 590139 - metallophosphoesterase PFAM: metallophosphoesterase~KEGG: dia:Dtpsy_0472 metallophosphoesterase gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0556 Alide_0557 Alide_0557 Alide_0557 590369 591565 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: ajs:Ajs_0058 L-carnitine dehydratase/bile acid-inducible protein F gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0557 Alide_0558 Alide_0558 Alide_0558 591581 592060 + hypothetical protein KEGG: ctt:CtCNB1_2196 hypothetical protein gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0558 Alide_0559 Alide_0559 Alide_0559 592113 593111 + extra-cytoplasmic solute receptor KEGG: ctt:CtCNB1_2197 TctC gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0559 Alide_0560 Alide_0560 Alide_0560 593158 594006 - 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B 3-hydroxyacyl-CoA dehydrogenase domain-containing protein~KEGG: dia:Dtpsy_0476 3-hydroxybutyryl-CoA dehydrogenase gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0560 Alide_0561 Alide_0561 Alide_0561 594106 595698 + glucose-methanol-choline oxidoreductase PFAM: glucose-methanol-choline oxidoreductase%3B GMC oxidoreductase~KEGG: dia:Dtpsy_0477 choline dehydrogenase gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0561 Alide_0562 Alide_0562 Alide_0562 595815 596090 + pseudogene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0562 Alide_0563 Alide_0563 Alide_0563 596078 596383 - pseudogene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0563 Alide_0564 Alide_0564 Alide_0564 596410 597228 - ABC-2 type transporter%2C NodJ family KEGG: ajs:Ajs_3712 ABC transporter~TIGRFAM: ABC-2 type transporter%2C NodJ family~PFAM: ABC-2 type transporter gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0564 Alide_0565 Alide_0565 Alide_0565 597230 598171 - ABC transporter related protein KEGG: ajs:Ajs_3711 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0565 Alide_0566 Alide_0566 Alide_0566 598276 599988 - Tannase and feruloyl esterase PFAM: Tannase and feruloyl esterase~KEGG: reu:Reut_A1509 tannase and feruloyl esterase gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0566 Alide_0567 Alide_0567 Alide_0567 600130 601614 - AMP nucleosidase TIGRFAM: AMP nucleosidase~KEGG: aav:Aave_4246 AMP nucleosidase~PFAM: AMP nucleoside phosphorylase-like%3B purine or other phosphorylase family 1 gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0567 Alide_0568 Alide_0568 Alide_0568 601650 603746 - diguanylate cyclase TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B PAS fold-4 domain protein%3B PAS fold-3 domain protein~KEGG: dia:Dtpsy_0486 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~SMART: EAL domain protein%3B GGDEF domain containing protein%3B PAS domain containing protein gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0568 Alide_0569 Alide_0569 Alide_0569 603849 604802 + cation diffusion facilitator family transporter manually curated~TIGRFAM: cation diffusion facilitator family transporter~KEGG: ajs:Ajs_3707 cation diffusion facilitator family transporter~PFAM: cation efflux protein gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0569 Alide_0570 Alide_0570 Alide_0570 604799 605242 + D-tyrosyl-tRNA(Tyr) deacylase KEGG: dia:Dtpsy_0488 D-tyrosyl-tRNA(Tyr) deacylase~TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase~PFAM: D-tyrosyl-tRNA(Tyr) deacylase gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0570 Alide_0571 Alide_0571 Alide_0571 605308 606054 - protein of unknown function DUF81 PFAM: protein of unknown function DUF81~KEGG: dia:Dtpsy_0490 protein of unknown function DUF81 gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0571 Alide_0572 Alide_0572 Alide_0572 606220 607167 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dac:Daci_1220 LysR family transcriptional regulator gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0572 Alide_0573 Alide_0573 Alide_0573 607272 608243 + hypothetical protein KEGG: dac:Daci_1221 hypothetical protein gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0573 Alide_0574 Alide_0574 Alide_0574 608263 609513 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: dac:Daci_1222 L-carnitine dehydratase/bile acid-inducible protein F gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0574 Alide_0575 Alide_0575 Alide_0575 609546 610532 + quinone oxidoreductase%2C YhdH/YhfP family KEGG: dac:Daci_1223 quinone oxidoreductase~TIGRFAM: quinone oxidoreductase%2C YhdH/YhfP family~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0575 Alide_0576 Alide_0576 Alide_0576 610588 612147 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: reh:H16_B1709 acyl-CoA synthetase gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0576 Alide_0577 Alide_0577 Alide_0577 612164 612616 - protein of unknown function UPF0054 PFAM: protein of unknown function UPF0054~KEGG: ajs:Ajs_3702 hypothetical protein gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0577 Alide_0578 Alide_0578 Alide_0578 612668 613618 - PhoH family protein PFAM: PhoH family protein~KEGG: dia:Dtpsy_0492 PhoH family protein gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0578 Alide_0579 Alide_0579 Alide_0579 613666 614238 + Holliday junction DNA helicase RuvA TIGRFAM: Holliday junction DNA helicase RuvA~PFAM: DNA recombination protein RuvA domain I%3B RuvA domain protein~KEGG: dia:Dtpsy_0493 Holliday junction DNA helicase RuvA~SMART: Helix-hairpin-helix DNA-binding class 1 gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0579 Alide_0580 Alide_0580 Alide_0580 614275 615756 + endoproteinase Arg-C KEGG: dia:Dtpsy_0494 endoproteinase Arg-C gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0580 Alide_0581 Alide_0581 Alide_0581 615770 618574 - DnaK-related protein KEGG: ajs:Ajs_3698 DnaK-related protein gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0581 Alide_0582 Alide_0582 Alide_0582 618571 620463 - putative heat-shock chaperone protein KEGG: dac:Daci_5720 putative heat-shock chaperone protein gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0582 Alide_0583 Alide_0583 Alide_0583 620460 621065 - hypothetical protein KEGG: dac:Daci_5721 hypothetical protein gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0583 Alide_0584 Alide_0584 Alide_0584 621177 622250 + Holliday junction DNA helicase RuvB SMART: AAA ATPase~manually curated~KEGG: dia:Dtpsy_0499 Holliday junction DNA helicase RuvB~TIGRFAM: Holliday junction DNA helicase RuvB~PFAM: AAA ATPase central domain protein%3B Holliday junction DNA helicase RuvB domain gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0584 Alide_0585 Alide_0585 Alide_0585 622260 622982 - MgtC/SapB transporter PFAM: MgtC/SapB transporter~KEGG: dac:Daci_1228 MgtC/SapB transporter gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0585 Alide_0586 Alide_0586 Alide_0586 623038 623388 - hypothetical protein KEGG: dia:Dtpsy_3519 hypothetical protein gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0586 Alide_0587 Alide_0587 Alide_0587 623496 623690 - hypothetical protein KEGG: ctt:CtCNB1_4283 hypothetical protein gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0587 Alide_0588 Alide_0588 Alide_0588 624034 625197 - alanine racemase domain protein PFAM: alanine racemase domain protein~KEGG: dia:Dtpsy_0501 alanine racemase domain protein gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0588 Alide_0589 Alide_0589 Alide_0589 625181 625828 - Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: dia:Dtpsy_0502 phosphoglycerate mutase gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0589 Alide_0590 Alide_0590 Alide_0590 625836 626450 - hypothetical protein KEGG: dia:Dtpsy_0504 hypothetical protein gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0590 Alide_0591 Alide_0591 Alide_0591 626624 627556 - PP-loop domain protein PFAM: PP-loop domain protein~KEGG: dia:Dtpsy_0505 PP-loop domain protein gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0591 Alide_0592 Alide_0592 Alide_0592 627561 627953 - dihydroneopterin aldolase PFAM: dihydroneopterin aldolase~KEGG: dia:Dtpsy_0506 dihydroneopterin aldolase gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0592 Alide_0593 Alide_0593 Alide_0593 627958 628371 - dihydroneopterin aldolase PFAM: dihydroneopterin aldolase~KEGG: dia:Dtpsy_0507 dihydroneopterin aldolase gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0593 Alide_0594 Alide_0594 Alide_0594 628368 629174 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bge:BC1002_2951 short-chain dehydrogenase/reductase SDR gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0594 Alide_0595 Alide_0595 Alide_0595 629313 630398 + protein of unknown function DUF185 PFAM: protein of unknown function DUF185~KEGG: dia:Dtpsy_0510 protein of unknown function DUF185 gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0595 Alide_0596 Alide_0596 Alide_0596 630425 630829 + Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: rme:Rmet_4030 hypothetical protein gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0596 Alide_0597 Alide_0597 Alide_0597 630833 631027 + hypothetical protein KEGG: dia:Dtpsy_0515 hypothetical protein gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0597 Alide_0598 Alide_0598 Alide_0598 631170 632129 + ROK family protein PFAM: ROK family protein~KEGG: ajs:Ajs_0500 glucokinase gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0598 Alide_0599 Alide_0599 Alide_0599 632090 633481 - alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) TIGRFAM: alpha%2Calpha-trehalose-phosphate synthase [UDP-forming]~KEGG: ajs:Ajs_0501 alpha%2Calpha-trehalose-phosphate synthase (UDP-forming)~PFAM: glycosyl transferase family 20 gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0599 Alide_0600 Alide_0600 Alide_0600 633478 635278 - pseudogene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0600 Alide_0601 Alide_0601 Alide_0601 635284 636039 - trehalose-phosphatase KEGG: dia:Dtpsy_0519 trehalose-phosphatase~TIGRFAM: trehalose-phosphatase%3B HAD-superfamily hydrolase%2C subfamily IIB~PFAM: trehalose-phosphatase gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0601 Alide_0602 Alide_0602 Alide_0602 636182 636628 + thioredoxin KEGG: dia:Dtpsy_0520 thioredoxin~TIGRFAM: thioredoxin%3B MJ0042 family finger-like protein~PFAM: Thioredoxin domain-containing protein gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0602 Alide_0603 Alide_0603 Alide_0603 636617 637864 - Polynucleotide adenylyltransferase region protein PFAM: Polynucleotide adenylyltransferase region%3B metal-dependent phosphohydrolase HD sub domain~KEGG: dia:Dtpsy_0521 polynucleotide adenylyltransferase/metal dependent phosphohydrolase gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0603 Alide_0604 Alide_0604 Alide_0604 637931 638914 + sigma-54 factor interaction domain-containing protein KEGG: vei:Veis_3990 sigma-54 dependent trancsriptional regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0604 Alide_0605 Alide_0605 Alide_0605 639099 640460 + hypothetical protein KEGG: vei:Veis_3993 hypothetical protein gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0605 Alide_0606 Alide_0606 Alide_0606 640475 640795 + hypothetical protein KEGG: vei:Veis_3992 hypothetical protein gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0606 Alide_0607 Alide_0607 Alide_0607 640833 641804 + hypothetical protein KEGG: vei:Veis_3991 hypothetical protein gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0607 Alide_0608 Alide_0608 Alide_0608 641806 642576 - metallophosphoesterase PFAM: metallophosphoesterase~KEGG: dia:Dtpsy_0522 metallophosphoesterase gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0608 Alide_0609 Alide_0609 Alide_0609 642595 643281 - Glutathione S-transferase domain protein PFAM: Glutathione S-transferase domain~KEGG: ajs:Ajs_0507 glutathione S-transferase domain-containing protein gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0609 Alide_0610 Alide_0610 Alide_0610 643370 643942 - 5-formyltetrahydrofolate cyclo-ligase KEGG: dia:Dtpsy_0524 5-formyltetrahydrofolate cyclo-ligase~TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase~PFAM: 5-formyltetrahydrofolate cyclo-ligase gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0610 Alide_0611 Alide_0611 Alide_0611 643957 645939 + Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic~KEGG: dia:Dtpsy_0525 lytic transglycosylase catalytic gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0611 Alide_0612 Alide_0612 Alide_0612 646002 646529 - cytochrome b561 KEGG: ajs:Ajs_0510 cytochrome b561 gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0612 Alide_0613 Alide_0613 Alide_0613 646529 646801 - conserved hypothetical protein KEGG: dia:Dtpsy_0527 putative signal peptide protein gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0613 Alide_0614 Alide_0614 Alide_0614 646938 647621 - 2OG-Fe(II) oxygenase KEGG: ajs:Ajs_0512 putative hydroxylase~PFAM: 2OG-Fe(II) oxygenase~SMART: Prolyl 4-hydroxylase alpha subunit gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0614 Alide_0615 Alide_0615 Alide_0615 647615 648712 - FMN-dependent alpha-hydroxy acid dehydrogenase PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase~KEGG: ajs:Ajs_0513 (S)-2-hydroxy-acid oxidase gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0615 Alide_0616 Alide_0616 Alide_0616 648766 651054 - TonB-dependent receptor PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: ajs:Ajs_0514 TonB-dependent receptor gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0616 Alide_0617 Alide_0617 Alide_0617 651209 652135 - beta-lactamase domain-containing protein KEGG: ajs:Ajs_0515 beta-lactamase domain-containing protein gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0617 Alide_0618 Alide_0618 Alide_0618 652154 653839 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: ajs:Ajs_0516 AMP-dependent synthetase and ligase gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0618 Alide_0619 Alide_0619 Alide_0619 653962 654864 + PGAP1 family protein KEGG: dia:Dtpsy_0533 PGAP1 family protein gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0619 Alide_0620 Alide_0620 Alide_0620 654967 656184 - Beta-ketoacyl synthase PFAM: Beta-ketoacyl synthase~KEGG: dia:Dtpsy_0542 beta-ketoacyl synthase gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0620 Alide_0621 Alide_0621 Alide_0621 656199 656705 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA~KEGG: dia:Dtpsy_0541 3-hydroxydecanoyl-(acyl carrier protein) dehydratase~PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0621 Alide_0622 Alide_0622 Alide_0622 656794 658383 - apolipoprotein N-acyltransferase KEGG: ajs:Ajs_0524 apolipoprotein N-acyltransferase~TIGRFAM: apolipoprotein N-acyltransferase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0622 Alide_0623 Alide_0623 Alide_0623 658383 659270 - CBS domain containing protein PFAM: CBS domain containing protein%3B transporter-associated region~KEGG: ajs:Ajs_0523 CBS domain-containing protein gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0623 Alide_0624 Alide_0624 Alide_0624 659381 660082 - GCN5-related N-acetyltransferase KEGG: ajs:Ajs_0522 GCN5-related N-acetyltransferase~manually curated~PFAM: GCN5-related N-acetyltransferase gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0624 Alide_0625 Alide_0625 Alide_0625 660233 660718 - Transcription regulator AsnC-type-like protein KEGG: dia:Dtpsy_0537 transcriptional regulator%2C AsnC family~PFAM: Transcription regulator AsnC-type-like~SMART: Transcription regulator AsnC-type gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0625 Alide_0626 Alide_0626 Alide_0626 660878 661999 + 4-hydroxyphenylpyruvate dioxygenase TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase~KEGG: ajs:Ajs_0520 4-hydroxyphenylpyruvate dioxygenase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0626 Alide_0627 Alide_0627 Alide_0627 662001 662825 + phenylalanine-4-hydroxylase TIGRFAM: phenylalanine-4-hydroxylase~KEGG: dia:Dtpsy_0534 phenylalanine 4-monooxygenase~PFAM: Aromatic amino acid hydroxylase-like gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0627 Alide_0628 Alide_0628 Alide_0628 662966 664201 + 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) KEGG: pol:Bpro_0273 branched-chain alpha-keto acid dehydrogenase E1 component~PFAM: dehydrogenase E1 component gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0628 Alide_0629 Alide_0629 Alide_0629 664241 665245 + Transketolase central region protein PFAM: Transketolase central region%3B Transketolase domain-containing protein~KEGG: pol:Bpro_0274 branched-chain alpha-keto acid dehydrogenase E1 component gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0629 Alide_0630 Alide_0630 Alide_0630 665247 666554 + catalytic domain-containing protein of components of various dehydrogenase complexes PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes%3B biotin/lipoyl attachment domain-containing protein%3B E3 binding domain protein~KEGG: bpt:Bpet3509 branched-chain alpha-keto acid dehydrogenase subunit E2 gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0630 Alide_0631 Alide_0631 Alide_0631 666562 667959 + dihydrolipoamide dehydrogenase KEGG: bch:Bcen2424_1246 dihydrolipoamide dehydrogenase~TIGRFAM: dihydrolipoamide dehydrogenase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0631 Alide_0632 Alide_0632 Alide_0632 668064 669002 + glycyl-tRNA synthetase%2C alpha subunit TIGRFAM: glycyl-tRNA synthetase%2C alpha subunit~KEGG: dac:Daci_1288 glycyl-tRNA synthetase subunit alpha~PFAM: glycyl-tRNA synthetase alpha subunit gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0632 Alide_0633 Alide_0633 Alide_0633 669022 671187 + glycyl-tRNA synthetase%2C beta subunit TIGRFAM: glycyl-tRNA synthetase%2C beta subunit~KEGG: ajs:Ajs_0528 glycine--tRNA ligase gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0633 Alide_0634 Alide_0634 Alide_0634 671233 671808 + histidinol-phosphate phosphatase family protein TIGRFAM: histidinol-phosphate phosphatase family protein%3B hydrolase%2C HAD-superfamily%2C subfamily IIIA~KEGG: dia:Dtpsy_0545 histidinol-phosphate phosphatase family protein gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0634 Alide_0635 Alide_0635 Alide_0635 672059 672802 + phospholipid/glycerol acyltransferase KEGG: ajs:Ajs_0530 phospholipid/glycerol acyltransferase~PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0635 Alide_0636 Alide_0636 Alide_0636 672805 673608 + protein of unknown function DUF45 PFAM: protein of unknown function DUF45~KEGG: dia:Dtpsy_0547 protein of unknown function DUF45 gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0636 Alide_0637 Alide_0637 Alide_0637 673669 674103 + Rhodanese domain protein SMART: Rhodanese domain protein~KEGG: ajs:Ajs_0532 rhodanese domain-containing protein gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0637 Alide_0638 Alide_0638 Alide_0638 674108 674596 - Peptidoglycan-binding lysin domain protein KEGG: ajs:Ajs_0533 peptidoglycan-binding LysM~PFAM: Peptidoglycan-binding lysin domain%3B transport-associated~SMART: Peptidoglycan-binding LysM gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0638 Alide_0639 Alide_0639 Alide_0639 674743 675519 + transcriptional activator%2C Baf family KEGG: dia:Dtpsy_0550 pantothenate kinase~TIGRFAM: transcriptional activator%2C Baf family~PFAM: Bvg accessory factor gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0639 Alide_0640 Alide_0640 Alide_0640 675516 676193 - regulatory protein TetR PFAM: regulatory protein TetR~KEGG: dia:Dtpsy_0551 transcriptional regulator%2C TetR family gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0640 Alide_0641 Alide_0641 Alide_0641 676351 676794 - poly(hydroxyalkanoate) granule-associated protein KEGG: dia:Dtpsy_0552 poly(hydroxyalkanoate) granule-associated protein~TIGRFAM: poly(hydroxyalkanoate) granule-associated protein~PFAM: poly granule associated family protein gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0641 Alide_0642 Alide_0642 Alide_0642 676993 678054 + dTDP-glucose 4%2C6-dehydratase KEGG: ajs:Ajs_0537 dTDP-glucose 4%2C6-dehydratase~TIGRFAM: dTDP-glucose 4%2C6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0642 Alide_0643 Alide_0643 Alide_0643 678051 678929 + dTDP-4-dehydrorhamnose reductase TIGRFAM: dTDP-4-dehydrorhamnose reductase~KEGG: ajs:Ajs_0538 dTDP-4-dehydrorhamnose reductase~PFAM: dTDP-4-dehydrorhamnose reductase gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0643 Alide_0644 Alide_0644 Alide_0644 678940 679830 + glucose-1-phosphate thymidylyltransferase KEGG: bvi:Bcep1808_3215 glucose-1-phosphate thymidylyltransferase~TIGRFAM: glucose-1-phosphate thymidylyltransferase~PFAM: Nucleotidyl transferase gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0644 Alide_0645 Alide_0645 Alide_0645 679830 680375 + dTDP-4-dehydrorhamnose 3%2C5-epimerase TIGRFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase~KEGG: dia:Dtpsy_0556 dTDP-4-dehydrorhamnose 3%2C5-epimerase~PFAM: dTDP-4-dehydrorhamnose 35-epimerase related gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0645 Alide_0646 Alide_0646 Alide_0646 680366 681547 + protein of unknown function DUF1972 PFAM: protein of unknown function DUF1972%3B glycosyl transferase group 1~KEGG: gme:Gmet_2169 glycosyltransferase-like protein gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0646 Alide_0647 Alide_0647 Alide_0647 681544 682455 + rhamnosyltransferase KEGG: ajs:Ajs_0541 rhamnosyltransferase~TIGRFAM: rhamnosyltransferase~PFAM: glycosyl transferase family 2 gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0647 Alide_0648 Alide_0648 Alide_0648 682463 684166 + type II secretion system protein E PFAM: type II secretion system protein E%3B General secretory system II protein E domain protein~KEGG: vei:Veis_0688 general secretory pathway protein E gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0648 Alide_0649 Alide_0649 Alide_0649 684159 685370 + Type II secretion system F domain protein PFAM: Type II secretion system F domain~KEGG: eba:ebA1619 general secretion pathway protein F gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0649 Alide_0650 Alide_0650 Alide_0650 685397 685837 + general secretion pathway protein G KEGG: aav:Aave_4158 general secretion pathway protein G~TIGRFAM: general secretion pathway protein G~PFAM: type II secretion system protein G gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0650 Alide_0651 Alide_0651 Alide_0651 685867 686349 + general secretion pathway protein H KEGG: dac:Daci_1302 general secretion pathway protein H gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0651 Alide_0652 Alide_0652 Alide_0652 686346 686747 + hypothetical protein KEGG: vei:Veis_0684 general secretion pathway protein I gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0652 Alide_0653 Alide_0653 Alide_0653 686744 687355 + hypothetical protein KEGG: vei:Veis_0683 general secretion pathway protein J gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0653 Alide_0654 Alide_0654 Alide_0654 687352 688263 + hypothetical protein KEGG: eba:ebA1612 general secretory pathway protein K gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0654 Alide_0655 Alide_0655 Alide_0655 688260 689273 + Fimbrial assembly family protein PFAM: Fimbrial assembly family protein~KEGG: aav:Aave_4153 fimbrial assembly family protein gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0655 Alide_0656 Alide_0656 Alide_0656 689270 689818 + General secretion pathway protein M PFAM: General secretion pathway protein M~KEGG: vei:Veis_0680 general secretion pathway protein M gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0656 Alide_0657 Alide_0657 Alide_0657 689815 690300 + hypothetical protein KEGG: fgr:FG01491.1 hypothetical protein gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0657 Alide_0658 Alide_0658 Alide_0658 690474 692777 + general secretion pathway protein D KEGG: eba:ebA1602 general (type II) secretion pathway (GSP) D protein~TIGRFAM: general secretion pathway protein D~PFAM: type II and III secretion system protein%3B NolW domain protein gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0658 Alide_0659 Alide_0659 Alide_0659 692992 693435 + hypothetical protein KEGG: dac:Daci_1310 hypothetical protein gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0659 Alide_0660 Alide_0660 Alide_0660 693609 694457 + hypothetical protein KEGG: azc:AZC_2635 hypothetical protein gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0660 Alide_0661 Alide_0661 Alide_0661 694570 695670 + hypothetical protein KEGG: dre:541320 integrin%2C alpha 6b gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0661 Alide_0662 Alide_0662 Alide_0662 695716 696597 + hypothetical protein KEGG: aco:Amico_0081 PpiC-type peptidyl-prolyl cis-trans isomerase gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0662 Alide_0663 Alide_0663 Alide_0663 696648 697319 + Methyltransferase type 11 PFAM: Methyltransferase type 11~KEGG: pnu:Pnuc_0320 methyltransferase type 11 gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0663 Alide_0664 Alide_0664 Alide_0664 697506 698483 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: ter:Tery_4437 glycosyl transferase family protein gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0664 Alide_0665 Alide_0665 Alide_0665 698630 699793 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: lxx:Lxx04950 glycosyl transferase gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0665 Alide_0666 Alide_0666 Alide_0666 699864 700688 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: mag:amb1063 ABC-type polysaccharide/polyol phosphate export systems gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0666 Alide_0667 Alide_0667 Alide_0667 700688 701908 + ABC transporter related protein KEGG: vei:Veis_0673 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0667 Alide_0668 Alide_0668 Alide_0668 701890 702801 + hypothetical protein KEGG: ajs:Ajs_3056 lipid A biosynthesis acyltransferase gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0668 Alide_0669 Alide_0669 Alide_0669 702794 703798 + Methyltransferase type 11 PFAM: Methyltransferase type 11~KEGG: azl:AZL_f01750 hypothetical protein gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0669 Alide_0670 Alide_0670 Alide_0670 703815 704459 + Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic~KEGG: rso:RSc0977 putative transglycosylase signal peptide protein gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0670 Alide_0671 Alide_0671 Alide_0671 704493 705593 + Glycosyl transferase%2C family 4%2C conserved region protein PFAM: Glycosyl transferase%2C family 4%2C conserved region~KEGG: vei:Veis_1227 glycosyl transferase family protein gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0671 Alide_0672 Alide_0672 Alide_0672 705654 706544 + acetylglutamate kinase TIGRFAM: acetylglutamate kinase~KEGG: ajs:Ajs_0588 acetylglutamate kinase~PFAM: aspartate/glutamate/uridylate kinase gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0672 Alide_0673 Alide_0673 Alide_0673 706727 707362 + regulatory protein TetR PFAM: regulatory protein TetR~KEGG: ajs:Ajs_0589 nucleoid occlusion protein gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0673 Alide_0674 Alide_0674 Alide_0674 707504 708160 + regulatory protein TetR PFAM: regulatory protein TetR~KEGG: dia:Dtpsy_0570 transcriptional regulator%2C TetR family gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0674 Alide_0675 Alide_0675 Alide_0675 708208 710004 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: dia:Dtpsy_0571 acyl-CoA dehydrogenase domain protein gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0675 Alide_0676 Alide_0676 Alide_0676 710075 710503 + Protein of unknown function DUF2147 KEGG: dia:Dtpsy_0572 hypothetical protein~manually curated~PFAM: Protein of unknown function DUF2147 gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0676 Alide_0677 Alide_0677 Alide_0677 710525 712927 + 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B 3-hydroxyacyl-CoA dehydrogenase domain-containing protein%3B Enoyl-CoA hydratase/isomerase~KEGG: dac:Daci_1339 3-hydroxyacyl-CoA dehydrogenase NAD-binding gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0677 Alide_0678 Alide_0678 Alide_0678 712948 714141 + acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~KEGG: mpt:Mpe_A0416 acetyl-CoA acetyltransferase~PFAM: Thiolase-like gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0678 Alide_0679 Alide_0679 Alide_0679 714185 715018 + hypothetical protein KEGG: dia:Dtpsy_0576 hypothetical protein gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0679 Alide_0680 Alide_0680 Alide_0680 715026 715802 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: dia:Dtpsy_0577 enoyl-CoA hydratase gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0680 Alide_0681 Alide_0681 Alide_0681 716058 716615 + protein of unknown function DUF583 PFAM: protein of unknown function DUF583~KEGG: dia:Dtpsy_0579 protein of unknown function DUF583 gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0681 Alide_0682 Alide_0682 Alide_0682 716667 717092 - thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: ajs:Ajs_0601 thioesterase superfamily protein gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0682 Alide_0683 Alide_0683 Alide_0683 717135 719024 + ABC transporter related protein KEGG: ajs:Ajs_0602 ABC transporter related~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0683 Alide_0684 Alide_0684 Alide_0684 719354 720970 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: reh:PHG398 acyl-CoA synthetase gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0684 Alide_0685 Alide_0685 Alide_0685 720974 721444 + MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: reh:PHG397 hypothetical protein gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0685 Alide_0686 Alide_0686 Alide_0686 721484 722479 + putative NagM-like protein KEGG: reh:PHG396 putative NagM-like protein gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0686 Alide_0687 Alide_0687 Alide_0687 722528 723505 + 2-nitropropane dioxygenase NPD PFAM: 2-nitropropane dioxygenase NPD~KEGG: reh:PHG395 putative 2-nitropropane dioxygenase gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0687 Alide_0688 Alide_0688 Alide_0688 723514 724503 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: reh:PHG401 putative regulatory protein gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0688 Alide_0689 Alide_0689 Alide_0689 724552 725889 + MazG nucleotide pyrophosphohydrolase PFAM: MazG nucleotide pyrophosphohydrolase~KEGG: ajs:Ajs_0603 MazG nucleotide pyrophosphohydrolase gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0689 Alide_0690 Alide_0690 Alide_0690 725944 726975 - TRAP dicarboxylate transporter%2C DctP subunit KEGG: ajs:Ajs_0604 TRAP dicarboxylate transporter%2C DctP subunit~TIGRFAM: TRAP dicarboxylate transporter%2C DctP subunit~PFAM: Extracellular solute-binding protein%2C family 7 gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0690 Alide_0691 Alide_0691 Alide_0691 726999 728297 - TRAP dicarboxylate transporter%2C DctM subunit KEGG: ajs:Ajs_0605 TRAP dicarboxylate transporter%2C DctM subunit~TIGRFAM: TRAP dicarboxylate transporter%2C DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0691 Alide_0692 Alide_0692 Alide_0692 728294 728875 - Tripartite ATP-independent periplasmic transporter DctQ component PFAM: Tripartite ATP-independent periplasmic transporter DctQ component~KEGG: ajs:Ajs_0606 tripartite ATP-independent periplasmic transporter DctQ gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0692 Alide_0693 Alide_0693 Alide_0693 729042 729989 + regulatory protein LysR PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: dia:Dtpsy_0586 transcriptional regulator%2C LysR family gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0693 Alide_0694 Alide_0694 Alide_0694 730193 731092 + extracellular solute-binding protein family 3 KEGG: dia:Dtpsy_0588 extracellular solute-binding protein family 3~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3 gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0694 Alide_0695 Alide_0695 Alide_0695 731196 731948 + polar amino acid ABC transporter%2C inner membrane subunit KEGG: dia:Dtpsy_0589 polar amino acid ABC transporter%2C inner membrane subunit~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0695 Alide_0696 Alide_0696 Alide_0696 731950 732621 + polar amino acid ABC transporter%2C inner membrane subunit KEGG: dia:Dtpsy_0590 polar amino acid ABC transporter%2C inner membrane subunit~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0696 Alide_0697 Alide_0697 Alide_0697 732646 733383 + ABC transporter related protein KEGG: dia:Dtpsy_0591 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0697 Alide_0698 Alide_0698 Alide_0698 733489 734523 - Ornithine cyclodeaminase KEGG: dia:Dtpsy_0592 ornithine cyclodeaminase~PFAM: ornithine cyclodeaminase/mu-crystallin gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0698 Alide_0699 Alide_0699 Alide_0699 734584 735405 - HAD-superfamily hydrolase%2C subfamily IIB KEGG: ajs:Ajs_0616 HAD family hydrolase~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIB~PFAM: Haloacid dehalogenase domain protein hydrolase type 3 gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0699 Alide_0700 Alide_0700 Alide_0700 735408 737033 - peptide chain release factor 3 KEGG: ctt:CtCNB1_0527 peptide chain release factor 3~TIGRFAM: peptide chain release factor 3%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0700 Alide_0701 Alide_0701 Alide_0701 737136 737906 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: rfr:Rfer_0646 short-chain dehydrogenase/reductase SDR gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0701 Alide_0702 Alide_0702 Alide_0702 738148 739578 + adenosylhomocysteinase TIGRFAM: adenosylhomocysteinase~KEGG: dia:Dtpsy_0597 S-adenosyl-L-homocysteine hydrolase~PFAM: S-adenosyl-L-homocysteine hydrolase%3B S-adenosyl-L-homocysteine hydrolase%2C NAD binding gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0702 Alide_0703 Alide_0703 Alide_0703 739685 740686 + ribosomal RNA methyltransferase RrmJ/FtsJ PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ~KEGG: ajs:Ajs_0619 ribosomal RNA methyltransferase RrmJ/FtsJ gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0703 Alide_0704 Alide_0704 Alide_0704 740683 741510 + 5%2C10-methylenetetrahydrofolate reductase TIGRFAM: 5%2C10-methylenetetrahydrofolate reductase~KEGG: dia:Dtpsy_0599 5%2C10-methylenetetrahydrofolate reductase~PFAM: methylenetetrahydrofolate reductase gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0704 Alide_0705 Alide_0705 Alide_0705 741738 742256 + rare lipoprotein A KEGG: ajs:Ajs_0622 rare lipoprotein A~TIGRFAM: rare lipoprotein A~PFAM: Rare lipoprotein A gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0705 Alide_0706 Alide_0706 Alide_0706 742257 743174 - protein of unknown function DUF519 PFAM: protein of unknown function DUF519~KEGG: dia:Dtpsy_0602 protein of unknown function DUF519 gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0706 Alide_0707 Alide_0707 Alide_0707 743351 745147 + Serine/threonine-protein kinase-like domain protein KEGG: ajs:Ajs_0624 protein kinase~PFAM: Serine/threonine-protein kinase-like domain~SMART: serine/threonine protein kinase%3B Tyrosine-protein kinase%2C catalytic domain gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0707 Alide_0708 Alide_0708 Alide_0708 745253 745720 + ribosomal protein L13 KEGG: aav:Aave_4053 50S ribosomal protein L13~TIGRFAM: ribosomal protein L13~PFAM: ribosomal protein L13 gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0708 Alide_0709 Alide_0709 Alide_0709 745730 746122 + ribosomal protein S9 PFAM: ribosomal protein S9~KEGG: ctt:CtCNB1_0541 ribosomal protein S9 gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0709 Alide_0710 Alide_0710 Alide_0710 746286 746660 + iron-sulfur cluster assembly accessory protein KEGG: dia:Dtpsy_0608 iron-sulfur cluster insertion protein ErpA~TIGRFAM: iron-sulfur cluster assembly accessory protein~PFAM: HesB/YadR/YfhF-family protein gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0710 Alide_0711 Alide_0711 Alide_0711 746737 747225 - hypothetical protein KEGG: rfr:Rfer_0842 hypothetical protein gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0711 Alide_0712 Alide_0712 Alide_0712 747617 748741 - protein of unknown function UPF0075 PFAM: protein of unknown function UPF0075~KEGG: dia:Dtpsy_0609 anhydro-N-acetylmuramic acid kinase gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0712 Alide_0713 Alide_0713 Alide_0713 748757 750139 - Peptidase M23 PFAM: Peptidase M23~KEGG: ajs:Ajs_0631 peptidase M23B gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0713 Alide_0714 Alide_0714 Alide_0714 750311 751543 + tyrosyl-tRNA synthetase TIGRFAM: tyrosyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib%3B RNA-binding S4 domain protein~KEGG: ajs:Ajs_0632 tyrosyl-tRNA synthetase~SMART: RNA-binding S4 domain protein gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0714 Alide_0715 Alide_0715 Alide_0715 751605 752561 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ajs:Ajs_0634 LysR family transcriptional regulator gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0715 Alide_0716 Alide_0716 Alide_0716 752622 754046 + UDP-N-acetylglucosamine pyrophosphorylase TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase~KEGG: ajs:Ajs_0636 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase~PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase%3B transferase hexapeptide repeat containing protein gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0716 Alide_0717 Alide_0717 Alide_0717 754043 754825 + ATP-binding region ATPase domain protein KEGG: ajs:Ajs_0637 histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0717 Alide_0718 Alide_0718 Alide_0718 754854 755189 - MerR family transcriptional regulator KEGG: dia:Dtpsy_0617 MerR family transcriptional regulator gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0718 Alide_0719 Alide_0719 Alide_0719 755192 756187 - heat shock protein DnaJ domain protein KEGG: dia:Dtpsy_0618 heat shock protein DnaJ domain protein~PFAM: heat shock protein DnaJ domain protein%3B chaperone DnaJ domain protein~SMART: heat shock protein DnaJ domain protein gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0719 Alide_0720 Alide_0720 Alide_0720 756292 756783 - Transcription regulator AsnC-type-like protein KEGG: ajs:Ajs_0640 AsnC family transcriptional regulator~PFAM: Transcription regulator AsnC-type-like~SMART: Transcription regulator AsnC-type gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0720 Alide_0721 Alide_0721 Alide_0721 756918 758828 + glucosamine/fructose-6-phosphate aminotransferase%2C isomerizing KEGG: dia:Dtpsy_0620 glucosamine--fructose-6-phosphate aminotransferase~TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase%2C isomerizing~PFAM: glutamine amidotransferase class-II%3B sugar isomerase (SIS) gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0721 Alide_0722 Alide_0722 Alide_0722 759177 761135 + hypothetical protein manually curated~KEGG: vei:Veis_4900 hypothetical protein gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0722 Alide_0723 Alide_0723 Alide_0723 761301 761492 - pseudogene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0723 Alide_0724 Alide_0724 Alide_0724 761494 763231 - pseudogene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0724 Alide_0725 Alide_0725 Alide_0725 763505 764419 - Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_0907 integrase catalytic subunit gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0725 Alide_0726 Alide_0726 Alide_0726 764416 764739 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0726 Alide_0727 Alide_0727 Alide_0727 764797 765249 + pseudogene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0727 Alide_0728 Alide_0728 Alide_0728 765493 765747 - hypothetical protein KEGG: ctt:CtCNB1_4017 hypothetical protein gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0728 Alide_0729 Alide_0729 Alide_0729 765821 766609 - oxidoreductase molybdopterin binding protein PFAM: oxidoreductase molybdopterin binding~KEGG: ctt:CtCNB1_4018 oxidoreductase%2C molybdopterin binding protein gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0729 Alide_0730 Alide_0730 Alide_0730 766606 767262 - putative transmembrane hydrogenase cytochrome KEGG: ctt:CtCNB1_4019 putative transmembrane hydrogenase cytochrome gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0730 Alide_0731 Alide_0731 Alide_0731 767358 768068 + response regulator receiver KEGG: pol:Bpro_0543 two component transcriptional regulator~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0731 Alide_0732 Alide_0732 Alide_0732 768065 769546 + ATP-binding region ATPase domain protein KEGG: vap:Vapar_2987 histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0732 Alide_0733 Alide_0733 Alide_0733 769564 769911 - hypothetical protein KEGG: rru:Rru_A2708 hypothetical protein gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0733 Alide_0734 Alide_0734 Alide_0734 770087 770893 - protein of unknown function DUF1555 KEGG: cja:CJA_0975 von Willebrand factor type A domain protein~PFAM: protein of unknown function DUF1555%3B von Willebrand factor type A~SMART: von Willebrand factor type A gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0734 Alide_0735 Alide_0735 Alide_0735 771304 772746 + mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase~KEGG: rfr:Rfer_0711 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase~PFAM: mannose-6-phosphate isomerase type II%3B Nucleotidyl transferase gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0735 Alide_0736 Alide_0736 Alide_0736 772970 773611 + polysaccharide export protein%2C PEP-CTERM sytem-associated KEGG: rfr:Rfer_0658 polysaccharide export protein~TIGRFAM: polysaccharide export protein%2C PEP-CTERM sytem-associated~PFAM: polysaccharide export protein%3B Soluble ligand binding domain gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0736 Alide_0737 Alide_0737 Alide_0737 773658 775220 + polysaccharide chain length determinant protein%2C PEP-CTERM locus subfamily manually curated~TIGRFAM: polysaccharide chain length determinant protein%2C PEP-CTERM locus subfamily~KEGG: rfr:Rfer_0659 lipopolysaccharide biosynthesis~PFAM: lipopolysaccharide biosynthesis protein gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0737 Alide_0738 Alide_0738 Alide_0738 775229 776191 + non-specific protein-tyrosine kinase manually curated~KEGG: app:CAP2UW1_1413 non-specific protein-tyrosine kinase gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0738 Alide_0739 Alide_0739 Alide_0739 776213 777868 + PEP-CTERM system associated protein TIGRFAM: PEP-CTERM system associated protein~KEGG: rfr:Rfer_0661 hypothetical protein gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0739 Alide_0740 Alide_0740 Alide_0740 777872 778972 + secretion ATPase%2C PEP-CTERM locus subfamily KEGG: rfr:Rfer_0662 ATPase~TIGRFAM: secretion ATPase%2C PEP-CTERM locus subfamily~SMART: AAA ATPase gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0740 Alide_0741 Alide_0741 Alide_0741 778981 779847 + polysaccharide deactylase family protein%2C PEP-CTERM locus subfamily KEGG: app:CAP2UW1_1417 polysaccharide deactylase family protein%2C PEP-Cterm locus subfamily~TIGRFAM: polysaccharide deactylase family protein%2C PEP-CTERM locus subfamily~PFAM: polysaccharide deacetylase gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0741 Alide_0742 Alide_0742 Alide_0742 779855 780901 + FemAB-related protein%2C PEP-CTERM system-associated KEGG: rfr:Rfer_0665 hypothetical protein~manually curated~TIGRFAM: FemAB-related protein%2C PEP-CTERM system-associated gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0742 Alide_0743 Alide_0743 Alide_0743 780915 782153 + sugar transferase%2C PEP-CTERM/EpsH1 system associated KEGG: dar:Daro_2405 glycosyl transferase%2C group 1~TIGRFAM: sugar transferase%2C PEP-CTERM/EpsH1 system associated~PFAM: glycosyl transferase group 1 gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0743 Alide_0744 Alide_0744 Alide_0744 782131 783732 + exosortase 1 KEGG: rfr:Rfer_0666 hypothetical protein~TIGRFAM: exosortase 1%3B eight transmembrane protein EpsH%3B EpsI family protein~PFAM: Exosortase EpsH-related gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0744 Alide_0745 Alide_0745 Alide_0745 783735 785645 + exosortase 1 system-associated amidotransferase 1 TIGRFAM: exosortase 1 system-associated amidotransferase 1%3B asparagine synthase (glutamine-hydrolyzing)~KEGG: rfr:Rfer_0669 asparagine synthase%2C glutamine-hydrolyzing~PFAM: asparagine synthase%3B glutamine amidotransferase class-II gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0745 Alide_0746 Alide_0746 Alide_0746 785638 786780 + sugar transferase%2C PEP-CTERM/EpsH1 system associated KEGG: dar:Daro_2407 glycosyl transferase%2C group 1~TIGRFAM: sugar transferase%2C PEP-CTERM/EpsH1 system associated~PFAM: glycosyl transferase group 1 gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0746 Alide_0747 Alide_0747 Alide_0747 786794 788011 + glycosyl transferase group 1 KEGG: dar:Daro_2409 glycosyl transferase%2C group 1~manually curated~PFAM: glycosyl transferase group 1 gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0747 Alide_0748 Alide_0748 Alide_0748 788008 789159 + UDP-N-acetylglucosamine 2-epimerase TIGRFAM: UDP-N-acetylglucosamine 2-epimerase~KEGG: gme:Gmet_1489 UDP-N-acetylglucosamine 2-epimerase~PFAM: UDP-N-acetylglucosamine 2-epimerase gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0748 Alide_0749 Alide_0749 Alide_0749 789149 790369 + nucleotide sugar dehydrogenase KEGG: geo:Geob_3227 nucleotide sugar dehydrogenase~TIGRFAM: nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%3B UDP-glucose/GDP-mannose dehydrogenase dimerisation%3B UDP-glucose/GDP-mannose dehydrogenase gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0749 Alide_0750 Alide_0750 Alide_0750 790392 791618 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: hse:Hsero_2751 glycosyltransferase 1 protein gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0750 Alide_0751 Alide_0751 Alide_0751 791714 791845 + hypothetical protein gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0751 Alide_0752 Alide_0752 Alide_0752 792011 793336 + wzy family polymerase%2C exosortase system type 1 associated KEGG: hse:Hsero_2764 O-antigen polymerase~TIGRFAM: wzy family polymerase%2C exosortase system type 1 associated~PFAM: O-antigen polymerase gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0752 Alide_0753 Alide_0753 Alide_0753 793333 794295 + polysaccharide deacetylase PFAM: polysaccharide deacetylase~KEGG: azo:azo3266 polysaccharide deacetylase gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0753 Alide_0754 Alide_0754 Alide_0754 794292 795305 + polysaccharide deacetylase PFAM: polysaccharide deacetylase~KEGG: nmu:Nmul_A0301 polysaccharide deacetylase gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0754 Alide_0755 Alide_0755 Alide_0755 795311 796354 + hypothetical protein KEGG: psl:Psta_3837 hypothetical protein gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0755 Alide_0756 Alide_0756 Alide_0756 796355 797302 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: aeh:Mlg_0132 glycosyl transferase family protein gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0756 Alide_0757 Alide_0757 Alide_0757 797372 798820 - polysaccharide biosynthesis protein PFAM: polysaccharide biosynthesis protein~KEGG: nwa:Nwat_1744 polysaccharide biosynthesis protein gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0757 Alide_0758 Alide_0758 Alide_0758 798978 800255 + nucleotide sugar dehydrogenase KEGG: reu:Reut_B5375 UDP-glucose/GDP-mannose dehydrogenase~TIGRFAM: nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%3B UDP-glucose/GDP-mannose dehydrogenase dimerisation%3B UDP-glucose/GDP-mannose dehydrogenase gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0758 Alide_0759 Alide_0759 Alide_0759 800258 801334 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase~KEGG: abo:ABO_0909 4-epimerase gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0759 Alide_0760 Alide_0760 Alide_0760 801461 803365 - sulfatase PFAM: sulfatase~KEGG: eli:ELI_12100 putative sulfatase gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0760 Alide_0761 Alide_0761 Alide_0761 803665 805563 - hypothetical protein KEGG: hse:Hsero_2760 hypothetical protein gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0761 Alide_0762 Alide_0762 Alide_0762 806467 807327 + hypothetical protein manually curated~KEGG: alv:Alvin_1802 hypothetical protein gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0762 Alide_0763 Alide_0763 Alide_0763 807433 808191 - protein of unknown function DUF1555 PFAM: protein of unknown function DUF1555~KEGG: ppd:Ppro_2434 hypothetical protein gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0763 Alide_0764 Alide_0764 Alide_0764 808386 809228 - alpha/beta hydrolase family protein KEGG: rfr:Rfer_0694 esterase/lipase/thioesterase family protein~TIGRFAM: hydrolase%2C ortholog 1%2C exosortase system type 1 associated~PFAM: alpha/beta hydrolase fold gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0764 Alide_0765 Alide_0765 Alide_0765 809225 810079 - alpha/beta hydrolase family protein TIGRFAM: hydrolase%2C ortholog 2%2C exosortase system type 1 associated~KEGG: app:CAP2UW1_4344 hydrolase%2C exosortase system type 1 associated gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0765 Alide_0766 Alide_0766 Alide_0766 810081 810341 - hypothetical protein KEGG: rfr:Rfer_0698 hypothetical protein gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0766 Alide_0767 Alide_0767 Alide_0767 810425 812071 + acyl-CoA ligase (AMP-forming)%2C exosortase system type 1 associated KEGG: app:CAP2UW1_1626 acyl-CoA ligase (AMP-forming)%2C exosortase system type 1 associated~TIGRFAM: acyl-CoA ligase (AMP-forming)%2C exosortase system type 1 associated~PFAM: AMP-dependent synthetase and ligase gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0767 Alide_0768 Alide_0768 Alide_0768 812058 813263 + pyridoxal-dependent decarboxylase%2C exosortase system type 1 associated KEGG: rfr:Rfer_0700 Orn/DAP/Arg decarboxylase 2~TIGRFAM: pyridoxal-dependent decarboxylase%2C exosortase system type 1 associated~PFAM: Orn/DAP/Arg decarboxylase 2 gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0768 Alide_0769 Alide_0769 Alide_0769 813266 815347 + PEP-CTERM system histidine kinase TIGRFAM: PEP-CTERM system histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~KEGG: rfr:Rfer_0703 periplasmic sensor signal transduction histidine kinase~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0769 Alide_0770 Alide_0770 Alide_0770 815356 816717 + PEP-CTERM system response regulator TIGRFAM: PEP-CTERM system response regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B response regulator receiver%3B helix-turn-helix Fis-type~KEGG: rfr:Rfer_0704 two component%2C sigma54 specific%2C fis family transcriptional regulator~SMART: response regulator receiver%3B AAA ATPase gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0770 Alide_0771 Alide_0771 Alide_0771 817007 819787 + PEP-CTERM system TPR-repeat lipoprotein KEGG: rfr:Rfer_0705 tetratricopeptide TPR_2~TIGRFAM: PEP-CTERM system TPR-repeat lipoprotein~PFAM: Tetratricopeptide TPR_1 repeat-containing protein gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0771 Alide_0772 Alide_0772 Alide_0772 819837 820616 + peptidase S1 and S6 chymotrypsin/Hap KEGG: rfr:Rfer_0710 peptidase S1 and S6%2C chymotrypsin/Hap~manually curated~PFAM: peptidase S1 and S6 chymotrypsin/Hap gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0772 Alide_0773 Alide_0773 Alide_0773 820644 820913 - translation initiation factor IF-1 KEGG: dia:Dtpsy_0625 translation initiation factor IF-1~TIGRFAM: translation initiation factor IF-1~PFAM: S1 IF1 family protein gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0773 Alide_0774 Alide_0774 Alide_0774 821261 821914 - 2OG-Fe(II) oxygenase PFAM: 2OG-Fe(II) oxygenase~KEGG: dia:Dtpsy_0631 2OG-Fe(II) oxygenase gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0774 Alide_0775 Alide_0775 Alide_0775 822005 823513 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: ajs:Ajs_0653 AMP-dependent synthetase and ligase gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0775 Alide_0776 Alide_0776 Alide_0776 823610 824329 + oxidoreductase FAD/NAD(P)-binding domain protein PFAM: oxidoreductase FAD/NAD(P)-binding domain protein%3B Oxidoreductase FAD-binding domain protein~KEGG: ctt:CtCNB1_2425 FAD-binding oxidoreductase gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0776 Alide_0777 Alide_0777 Alide_0777 824323 825903 - hypothetical protein KEGG: vap:Vapar_3422 hypothetical protein gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0777 Alide_0778 Alide_0778 Alide_0778 825915 826523 - peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin%3B Peptidoglycan-binding domain 1 protein~KEGG: pph:Ppha_2260 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0778 Alide_0779 Alide_0779 Alide_0779 826699 827370 + DSBA oxidoreductase PFAM: DSBA oxidoreductase~KEGG: ajs:Ajs_0654 DsbA oxidoreductase gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0779 Alide_0780 Alide_0780 Alide_0780 827442 827924 - CreA family protein PFAM: CreA family protein~KEGG: dia:Dtpsy_0634 CreA family protein gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0780 Alide_0781 Alide_0781 Alide_0781 827921 830512 - cyanophycin synthetase KEGG: dia:Dtpsy_0635 cyanophycin synthetase~TIGRFAM: cyanophycin synthetase~PFAM: Mur ligase middle domain protein%3B ATP-dependent carboxylate-amine ligase domain protein ATP-grasp%3B cytoplasmic peptidoglycan synthetase domain protein gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0781 Alide_0782 Alide_0782 Alide_0782 830584 832764 - cyanophycin synthetase TIGRFAM: cyanophycin synthetase~KEGG: ctt:CtCNB1_0610 cyanophycin synthetase~PFAM: Carbamoyl-phosphate synthase L chain ATP-binding gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0782 Alide_0783 Alide_0783 Alide_0783 833014 835326 + ABC transporter related protein manually curated~PFAM: ABC transporter related%3B ABC transporter transmembrane region~KEGG: dia:Dtpsy_0637 ABC transporter related~SMART: AAA ATPase gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0783 Alide_0784 Alide_0784 Alide_0784 835341 835829 + hypothetical protein KEGG: dia:Dtpsy_0638 hypothetical protein gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0784 Alide_0785 Alide_0785 Alide_0785 835970 836410 + hypothetical protein KEGG: dia:Dtpsy_0639 hypothetical protein gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0785 Alide_0786 Alide_0786 Alide_0786 836534 838588 + small GTP-binding protein KEGG: vap:Vapar_5542 elongation factor G~TIGRFAM: small GTP-binding protein~PFAM: elongation factor G domain IV%3B protein synthesis factor GTP-binding%3B elongation factor G domain-containing protein gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0786 Alide_0787 Alide_0787 Alide_0787 838602 839534 - 5'-nucleotidase KEGG: vei:Veis_1630 5-nucleotidase~PFAM: 5-nucleotidase gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0787 Alide_0788 Alide_0788 Alide_0788 839539 840768 - general secretion pathway protein F KEGG: dia:Dtpsy_0642 general secretion pathway protein F~TIGRFAM: general secretion pathway protein F~PFAM: Type II secretion system F domain gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0788 Alide_0789 Alide_0789 Alide_0789 840823 841818 - luciferase family oxidoreductase%2C group 1 KEGG: ajs:Ajs_0664 luciferase family protein~TIGRFAM: luciferase family oxidoreductase%2C group 1~PFAM: Luciferase-like%2C subgroup gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0789 Alide_0790 Alide_0790 Alide_0790 842007 842534 + hypothetical protein KEGG: ajs:Ajs_0665 hypothetical protein gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0790 Alide_0791 Alide_0791 Alide_0791 842544 843944 - general secretory pathway protein E TIGRFAM: general secretory pathway protein E~PFAM: type II secretion system protein E~KEGG: dia:Dtpsy_0645 general secretory pathway protein E~SMART: AAA ATPase gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0791 Alide_0792 Alide_0792 Alide_0792 843955 846288 - general secretion pathway protein D KEGG: dia:Dtpsy_0646 general secretion pathway protein D~TIGRFAM: general secretion pathway protein D~PFAM: type II and III secretion system protein%3B NolW domain protein gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0792 Alide_0793 Alide_0793 Alide_0793 846293 847108 - putative general secretory pathway N transmembrane protein KEGG: ajs:Ajs_0668 putative general secretory pathway N transmembrane protein gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0793 Alide_0794 Alide_0794 Alide_0794 847142 847651 - General secretion pathway M protein PFAM: General secretion pathway M protein~KEGG: ajs:Ajs_0669 hypothetical protein gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0794 Alide_0795 Alide_0795 Alide_0795 847648 848880 - General secretion pathway L PFAM: General secretion pathway L~KEGG: ajs:Ajs_0670 general secretion pathway L gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0795 Alide_0796 Alide_0796 Alide_0796 848948 849925 - general secretion pathway protein K KEGG: ajs:Ajs_0671 general secretion pathway protein K gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0796 Alide_0797 Alide_0797 Alide_0797 849922 850611 - hypothetical protein KEGG: ajs:Ajs_0672 hypothetical protein gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0797 Alide_0798 Alide_0798 Alide_0798 850613 850978 - general secretion pathway protein I KEGG: dia:Dtpsy_0652 general secretion pathway protein I~TIGRFAM: general secretion pathway protein I~PFAM: type II secretion system protein I/J gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0798 Alide_0799 Alide_0799 Alide_0799 851247 851756 - general secretion pathway protein H KEGG: dia:Dtpsy_0653 general secretion pathway protein H~manually curated~TIGRFAM: general secretion pathway protein H gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0799 Alide_0800 Alide_0800 Alide_0800 851784 852191 - general secretion pathway protein G KEGG: aav:Aave_0925 general secretion pathway protein G~TIGRFAM: general secretion pathway protein G~PFAM: type II secretion system protein G gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0800 Alide_0801 Alide_0801 Alide_0801 852292 852738 + hypothetical protein KEGG: dia:Dtpsy_0655 hypothetical protein gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0801 Alide_0802 Alide_0802 Alide_0802 852739 853305 - Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: dia:Dtpsy_0656 phosphoglycerate mutase gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0802 Alide_0803 Alide_0803 Alide_0803 853302 854120 - cobalamin-5-phosphate synthase CobS PFAM: cobalamin-5-phosphate synthase CobS~KEGG: dia:Dtpsy_0657 cobalamin-5-phosphate synthase CobS gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0803 Alide_0804 Alide_0804 Alide_0804 854183 855748 - threonine dehydratase%2C biosynthetic KEGG: dia:Dtpsy_0658 threonine dehydratase~TIGRFAM: threonine dehydratase%2C biosynthetic~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit%3B Threonine dehydratase domain-containing protein gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0804 Alide_0805 Alide_0805 Alide_0805 856030 856479 + OsmC family protein PFAM: OsmC family protein~KEGG: dia:Dtpsy_0659 OsmC family protein gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0805 Alide_0806 Alide_0806 Alide_0806 856490 857107 - putative ubiquinone biosynthesis protein KEGG: dia:Dtpsy_0660 putative ubiquinone biosynthesis protein gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0806 Alide_0807 Alide_0807 Alide_0807 857336 858376 + porin Gram-negative type PFAM: porin Gram-negative type~KEGG: aav:Aave_0932 porin gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0807 Alide_0808 Alide_0808 Alide_0808 858598 859809 + porin Gram-negative type PFAM: porin Gram-negative type~KEGG: dia:Dtpsy_0662 porin gram-negative type gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0808 Alide_0809 Alide_0809 Alide_0809 860058 861041 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_0664 binding-protein-dependent transport systems inner membrane component gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0809 Alide_0810 Alide_0810 Alide_0810 861043 862263 + amidohydrolase TIGRFAM: amidohydrolase~KEGG: dia:Dtpsy_0665 amidohydrolase~PFAM: peptidase M20%3B peptidase dimerisation domain protein gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0810 Alide_0811 Alide_0811 Alide_0811 862341 863252 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_0667 binding-protein-dependent transport systems inner membrane component gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0811 Alide_0812 Alide_0812 Alide_0812 863259 864233 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~KEGG: dia:Dtpsy_0668 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~SMART: AAA ATPase gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0812 Alide_0813 Alide_0813 Alide_0813 864230 865246 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~KEGG: dia:Dtpsy_0669 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~SMART: AAA ATPase gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0813 Alide_0814 Alide_0814 Alide_0814 865289 865783 + PEBP family protein PFAM: PEBP family protein~KEGG: dia:Dtpsy_0671 PEBP family protein gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0814 Alide_0815 Alide_0815 Alide_0815 865835 866680 - helix-turn-helix protein RpiR PFAM: helix-turn-helix protein RpiR%3B sugar isomerase (SIS)~KEGG: ajs:Ajs_0694 RpiR family transcriptional regulator gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0815 Alide_0816 Alide_0816 Alide_0816 866796 867746 + transaldolase KEGG: dia:Dtpsy_0674 transaldolase B~TIGRFAM: transaldolase~PFAM: Transaldolase gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0816 Alide_0817 Alide_0817 Alide_0817 867743 869338 + Glucose-6-phosphate isomerase KEGG: ajs:Ajs_0697 glucose-6-phosphate isomerase~PFAM: phosphoglucose isomerase (PGI) gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0817 Alide_0818 Alide_0818 Alide_0818 869461 871107 - chaperonin GroEL KEGG: aav:Aave_0945 chaperonin GroEL~TIGRFAM: chaperonin GroEL~PFAM: chaperonin Cpn60/TCP-1 gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0818 Alide_0819 Alide_0819 Alide_0819 871205 871495 - Chaperonin Cpn10 PFAM: Chaperonin Cpn10~KEGG: dac:Daci_5660 co-chaperonin GroES gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0819 Alide_0820 Alide_0820 Alide_0820 871697 872725 - cytidyltransferase-related domain protein KEGG: ajs:Ajs_0701 cytidyltransferase-like protein~TIGRFAM: cytidyltransferase-related domain protein~PFAM: NUDIX hydrolase%3B cytidylyltransferase gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0820 Alide_0821 Alide_0821 Alide_0821 872739 873920 - S-adenosylmethionine synthetase TIGRFAM: S-adenosylmethionine synthetase~KEGG: dia:Dtpsy_0683 S-adenosylmethionine synthetase~PFAM: S-adenosylmethionine synthetase gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0821 Alide_0822 Alide_0822 Alide_0822 874054 874908 + lipid A biosynthesis acyltransferase PFAM: lipid A biosynthesis acyltransferase~KEGG: ajs:Ajs_0706 lipid A biosynthesis acyltransferase gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0822 Alide_0823 Alide_0823 Alide_0823 874905 875786 + lipid A biosynthesis acyltransferase PFAM: lipid A biosynthesis acyltransferase~KEGG: ajs:Ajs_0707 lipid A biosynthesis acyltransferase gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0823 Alide_0824 Alide_0824 Alide_0824 875827 876729 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: vei:Veis_1352 LysR family transcriptional regulator gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0824 Alide_0825 Alide_0825 Alide_0825 876826 877806 + fis family transcriptional regulator KEGG: vei:Veis_1351 fis family transcriptional regulator gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0825 Alide_0826 Alide_0826 Alide_0826 877821 878801 + hypothetical protein KEGG: cti:RALTA_B1946 conserved hypothetical protein UPF0065 gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0826 Alide_0827 Alide_0827 Alide_0827 878828 879889 + 3-isopropylmalate dehydrogenase KEGG: vei:Veis_1349 3-isopropylmalate dehydrogenase~PFAM: isocitrate/isopropylmalate dehydrogenase gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0827 Alide_0828 Alide_0828 Alide_0828 879889 880701 + amidohydrolase 2 PFAM: amidohydrolase 2~KEGG: bbt:BBta_3003 hypothetical protein gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0828 Alide_0829 Alide_0829 Alide_0829 880689 881381 - ribosome biogenesis GTP-binding protein YsxC KEGG: aav:Aave_0983 ribosome biogenesis GTP-binding protein YsxC~TIGRFAM: ribosome biogenesis GTP-binding protein YsxC~PFAM: GTP-binding protein HSR1-related gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0829 Alide_0830 Alide_0830 Alide_0830 881464 882102 + cytochrome c class I PFAM: cytochrome c class I~KEGG: ajs:Ajs_0710 cytochrome c%2C class I gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0830 Alide_0831 Alide_0831 Alide_0831 882231 884429 + ResB family protein KEGG: dia:Dtpsy_0691 ResB family protein gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0831 Alide_0832 Alide_0832 Alide_0832 884426 885760 + cytochrome c-type biogenesis protein CcsB KEGG: ajs:Ajs_0712 cytochrome c assembly protein~TIGRFAM: cytochrome c-type biogenesis protein CcsB~PFAM: cytochrome c assembly protein gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0832 Alide_0833 Alide_0833 Alide_0833 885934 886932 + oxidoreductase molybdopterin binding protein PFAM: oxidoreductase molybdopterin binding~KEGG: dia:Dtpsy_0693 putative sulfite oxidase subunit YedY gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0833 Alide_0834 Alide_0834 Alide_0834 886932 887573 + Ferric reductase domain protein transmembrane component domain protein PFAM: Ferric reductase domain protein transmembrane component domain~KEGG: dia:Dtpsy_0694 ferric reductase domain protein transmembrane component gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0834 Alide_0835 Alide_0835 Alide_0835 887659 888462 - beta-lactamase domain protein KEGG: dia:Dtpsy_0695 beta-lactamase domain protein gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0835 Alide_0836 Alide_0836 Alide_0836 888531 889820 - diaminopimelate decarboxylase KEGG: dia:Dtpsy_0696 diaminopimelate decarboxylase~TIGRFAM: diaminopimelate decarboxylase~PFAM: Orn/DAP/Arg decarboxylase 2 gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0836 Alide_0837 Alide_0837 Alide_0837 889817 890029 - hypothetical protein manually curated~KEGG: ajs:Ajs_0717 hypothetical protein gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0837 Alide_0838 Alide_0838 Alide_0838 890042 890371 + iron donor protein CyaY KEGG: ajs:Ajs_0728 frataxin family protein~TIGRFAM: iron donor protein CyaY~PFAM: Frataxin family protein gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0838 Alide_0839 Alide_0839 Alide_0839 890378 892693 - penicillin-binding protein%2C 1A family KEGG: dia:Dtpsy_0698 penicillin-binding protein%2C 1A family~TIGRFAM: penicillin-binding protein%2C 1A family~PFAM: glycosyl transferase family 51%3B penicillin-binding protein transpeptidase gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0839 Alide_0840 Alide_0840 Alide_0840 893020 894090 + type IV pilus assembly protein PilM TIGRFAM: type IV pilus assembly protein PilM~KEGG: ajs:Ajs_0730 type IV pilus assembly protein PilM gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0840 Alide_0841 Alide_0841 Alide_0841 894087 894698 + Fimbrial assembly family protein PFAM: Fimbrial assembly family protein~KEGG: ajs:Ajs_0731 fimbrial assembly family protein gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0841 Alide_0842 Alide_0842 Alide_0842 894695 895378 + pilus assembly protein%2C PilO KEGG: ajs:Ajs_0732 pilus assembly protein%2C PilO gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0842 Alide_0843 Alide_0843 Alide_0843 895375 895932 + Pilus assembly protein PilP PFAM: Pilus assembly protein PilP~KEGG: dia:Dtpsy_0702 pilus assembly protein PilP gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0843 Alide_0844 Alide_0844 Alide_0844 895929 898070 + type IV pilus secretin PilQ KEGG: dia:Dtpsy_0703 type IV pilus secretin PilQ~TIGRFAM: type IV pilus secretin PilQ~PFAM: type II and III secretion system protein%3B NolW domain protein%3B Secretin/TonB short domain gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0844 Alide_0845 Alide_0845 Alide_0845 898092 899639 + Ig family protein PFAM: Ig family protein~KEGG: eba:ebA2288 hypothetical protein gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0845 Alide_0846 Alide_0846 Alide_0846 899763 900881 + 3-dehydroquinate synthase TIGRFAM: 3-dehydroquinate synthase~KEGG: dia:Dtpsy_0704 3-dehydroquinate synthase~PFAM: 3-dehydroquinate synthase gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0846 Alide_0847 Alide_0847 Alide_0847 900939 902111 + deoxyguanosinetriphosphate triphosphohydrolase TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~KEGG: ajs:Ajs_0736 deoxyguanosinetriphosphate triphosphohydrolase-like protein~SMART: metal-dependent phosphohydrolase HD region gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0847 Alide_0848 Alide_0848 Alide_0848 902143 902763 + protein of unknown function DUF1415 PFAM: protein of unknown function DUF1415~KEGG: dia:Dtpsy_0706 protein of unknown function DUF1415 gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0848 Alide_0849 Alide_0849 Alide_0849 902760 903632 + hypothetical protein KEGG: dia:Dtpsy_0707 hypothetical protein gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0849 Alide_0850 Alide_0850 Alide_0850 903748 905253 - methylmalonate-semialdehyde dehydrogenase KEGG: hse:Hsero_3067 methylmalonate-semialdehyde dehydrogenase~TIGRFAM: methylmalonate-semialdehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0850 Alide_0851 Alide_0851 Alide_0851 905268 906485 - branched-chain amino acid ABC transporter periplasmic protein KEGG: hse:Hsero_3068 branched-chain amino acid ABC transporter periplasmic protein gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0851 Alide_0852 Alide_0852 Alide_0852 906619 907545 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: hse:Hsero_3069 LysR family transcription regulator protein gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0852 Alide_0853 Alide_0853 Alide_0853 907612 908322 + hypothetical protein KEGG: vap:Vapar_1151 protein of unknown function DUF1568 gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0853 Alide_0854 Alide_0854 Alide_0854 908492 913225 + Glutamate synthase (ferredoxin) KEGG: ajs:Ajs_0741 glutamate synthase (NADH) large subunit~PFAM: ferredoxin-dependent glutamate synthase%3B glutamine amidotransferase class-II%3B glutamate synthase%3B glutamate synthase alpha subunit domain protein gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0854 Alide_0855 Alide_0855 Alide_0855 913266 914744 + glutamate synthase%2C NADH/NADPH%2C small subunit KEGG: dia:Dtpsy_0710 glutamate synthase subunit beta~TIGRFAM: glutamate synthase%2C NADH/NADPH%2C small subunit~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0855 Alide_0856 Alide_0856 Alide_0856 914949 915746 + extracellular solute-binding protein family 3 KEGG: ajs:Ajs_0743 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3%3B ionotropic glutamate receptor gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0856 Alide_0857 Alide_0857 Alide_0857 915808 916464 + polar amino acid ABC transporter%2C inner membrane subunit KEGG: ajs:Ajs_0744 polar amino acid ABC transporter%2C inner membrane subunit~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0857 Alide_0858 Alide_0858 Alide_0858 916445 917224 + ABC transporter related protein KEGG: dia:Dtpsy_0713 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0858 Alide_0859 Alide_0859 Alide_0859 917248 918552 + hypothetical protein KEGG: vei:Veis_4017 hypothetical protein gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0859 Alide_0860 Alide_0860 Alide_0860 918654 919613 - Spermidine synthase KEGG: ajs:Ajs_0746 spermidine synthase~PFAM: Spermine synthase gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0860 Alide_0861 Alide_0861 Alide_0861 919613 920023 - S-adenosylmethionine decarboxylase proenzyme KEGG: dia:Dtpsy_0715 S-adenosylmethionine decarboxylase proenzyme~TIGRFAM: S-adenosylmethionine decarboxylase proenzyme~PFAM: S-adenosylmethionine decarboxylase related gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0861 Alide_0862 Alide_0862 Alide_0862 920390 921238 + ABC transporter related protein KEGG: dia:Dtpsy_0716 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0862 Alide_0863 Alide_0863 Alide_0863 921235 922017 + protein of unknown function DUF140 PFAM: protein of unknown function DUF140~KEGG: dia:Dtpsy_0717 protein of unknown function DUF140 gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0863 Alide_0864 Alide_0864 Alide_0864 922052 922540 + Mammalian cell entry related domain protein PFAM: Mammalian cell entry related domain protein~KEGG: dia:Dtpsy_0718 mammalian cell entry related domain protein gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0864 Alide_0865 Alide_0865 Alide_0865 922537 923277 + VacJ family lipoprotein PFAM: VacJ family lipoprotein~KEGG: ajs:Ajs_0751 VacJ family lipoprotein gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0865 Alide_0866 Alide_0866 Alide_0866 923395 924057 + toluene tolerance family protein PFAM: toluene tolerance family protein~KEGG: dia:Dtpsy_0720 toluene tolerance family protein gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0866 Alide_0867 Alide_0867 Alide_0867 924075 924347 + sulfate transporter/antisigma-factor antagonist STAS KEGG: dia:Dtpsy_0721 sulfate transporter/antisigma-factor antagonist STAS gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0867 Alide_0868 Alide_0868 Alide_0868 924411 925706 + diguanylate cyclase TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: GGDEF domain containing protein%3B PAS fold-4 domain protein~KEGG: cps:CPS_0452 sensory box protein~SMART: GGDEF domain containing protein%3B PAS domain containing protein gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0868 Alide_0869 Alide_0869 Alide_0869 925788 926708 + ABC transporter related protein KEGG: dia:Dtpsy_0722 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0869 Alide_0870 Alide_0870 Alide_0870 926705 927460 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: aav:Aave_1020 ABC-2 type transporter gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0870 Alide_0871 Alide_0871 Alide_0871 927474 927722 + BolA family protein PFAM: BolA family protein~KEGG: dia:Dtpsy_0724 BolA family protein gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0871 Alide_0872 Alide_0872 Alide_0872 927747 929021 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase KEGG: ctt:CtCNB1_0710 UDP-N-acetylglucosamine~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0872 Alide_0873 Alide_0873 Alide_0873 929018 929668 + ATP phosphoribosyltransferase TIGRFAM: ATP phosphoribosyltransferase~KEGG: dia:Dtpsy_0726 ATP phosphoribosyltransferase catalytic subunit~PFAM: ATP phosphoribosyltransferase catalytic region gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0873 Alide_0874 Alide_0874 Alide_0874 929673 930989 + histidinol dehydrogenase TIGRFAM: histidinol dehydrogenase~KEGG: aav:Aave_1024 histidinol dehydrogenase~PFAM: Histidinol dehydrogenase gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0874 Alide_0875 Alide_0875 Alide_0875 931108 931386 + hypothetical protein KEGG: dac:Daci_5523 hypothetical protein gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0875 Alide_0876 Alide_0876 Alide_0876 931383 931835 + hypothetical protein KEGG: ctt:CtCNB1_0716 hypothetical protein gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0876 Alide_0877 Alide_0877 Alide_0877 931853 932971 + histidinol-phosphate aminotransferase KEGG: dia:Dtpsy_0729 histidinol-phosphate aminotransferase~TIGRFAM: histidinol-phosphate aminotransferase~PFAM: aminotransferase class I and II gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0877 Alide_0878 Alide_0878 Alide_0878 932968 933600 + Imidazoleglycerol-phosphate dehydratase KEGG: dia:Dtpsy_0730 imidazoleglycerol-phosphate dehydratase~PFAM: imidazoleglycerol-phosphate dehydratase gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0878 Alide_0879 Alide_0879 Alide_0879 933651 934319 + imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit KEGG: dia:Dtpsy_0731 imidazole glycerol phosphate synthase subunit HisH~TIGRFAM: imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit~PFAM: glutamine amidotransferase class-I gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0879 Alide_0880 Alide_0880 Alide_0880 934372 935115 + phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase~KEGG: ajs:Ajs_0765 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase~PFAM: histidine biosynthesis protein gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0880 Alide_0881 Alide_0881 Alide_0881 935122 936318 - hypothetical protein KEGG: ajs:Ajs_0766 hypothetical protein gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0881 Alide_0882 Alide_0882 Alide_0882 936386 937759 - putative transmembrane protein KEGG: ajs:Ajs_0767 putative transmembrane protein gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0882 Alide_0883 Alide_0883 Alide_0883 937759 939291 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: ajs:Ajs_0768 glycosyl transferase%2C group 1 gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0883 Alide_0884 Alide_0884 Alide_0884 939288 940289 - putative transmembrane protein KEGG: ajs:Ajs_0769 putative transmembrane protein gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0884 Alide_0885 Alide_0885 Alide_0885 940282 941676 - putative transmembrane protein KEGG: ajs:Ajs_0770 putative transmembrane protein gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0885 Alide_0886 Alide_0886 Alide_0886 941684 942238 - putative lipoprotein KEGG: ajs:Ajs_0771 putative lipoprotein gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0886 Alide_0887 Alide_0887 Alide_0887 942260 946063 - TPR repeat-containing protein KEGG: ajs:Ajs_0772 TPR repeat-containing protein gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0887 Alide_0888 Alide_0888 Alide_0888 946110 948941 - TM1410 hypothetical protein-related protein PFAM: TM1410 hypothetical-related protein%3B polysaccharide deacetylase~KEGG: ajs:Ajs_0773 polysaccharide deacetylase gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0888 Alide_0889 Alide_0889 Alide_0889 949114 950130 + UDP-glucose 4-epimerase KEGG: ajs:Ajs_0774 UDP-galactose 4-epimerase~TIGRFAM: UDP-glucose 4-epimerase~PFAM: NAD-dependent epimerase/dehydratase gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0889 Alide_0890 Alide_0890 Alide_0890 950171 950950 + imidazoleglycerol phosphate synthase%2C cyclase subunit KEGG: dia:Dtpsy_0738 imidazole glycerol phosphate synthase subunit HisF~TIGRFAM: imidazoleglycerol phosphate synthase%2C cyclase subunit~PFAM: histidine biosynthesis protein gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0890 Alide_0891 Alide_0891 Alide_0891 951057 951446 + Phosphoribosyl-AMP cyclohydrolase KEGG: aav:Aave_1048 phosphoribosyl-AMP cyclohydrolase~PFAM: phosphoribosyl-AMP cyclohydrolase gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0891 Alide_0892 Alide_0892 Alide_0892 951451 951828 + phosphoribosyl-ATP diphosphatase KEGG: dia:Dtpsy_0740 phosphoribosyl-ATP pyrophosphatase~TIGRFAM: phosphoribosyl-ATP diphosphatase~PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0892 Alide_0893 Alide_0893 Alide_0893 951825 952211 + putative transmembrane protein KEGG: dia:Dtpsy_0741 putative transmembrane protein gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0893 Alide_0894 Alide_0894 Alide_0894 952204 953232 + Patatin PFAM: Patatin~KEGG: ajs:Ajs_0779 patatin gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0894 Alide_0895 Alide_0895 Alide_0895 953271 953627 + histidine triad (HIT) protein PFAM: histidine triad (HIT) protein~KEGG: dia:Dtpsy_0743 histidine triad (HIT) protein gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0895 Alide_0896 Alide_0896 Alide_0896 953728 953976 + twin-arginine translocation protein%2C TatA/E family subunit KEGG: ajs:Ajs_0781 twin arginine translocase protein A~TIGRFAM: twin-arginine translocation protein%2C TatA/E family subunit~PFAM: sec-independent translocation protein mttA/Hcf106 gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0896 Alide_0897 Alide_0897 Alide_0897 954002 954481 + twin-arginine translocation protein%2C TatB subunit KEGG: dia:Dtpsy_0745 sec-independent translocase~TIGRFAM: twin-arginine translocation protein%2C TatB subunit~PFAM: sec-independent translocation protein mttA/Hcf106 gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0897 Alide_0898 Alide_0898 Alide_0898 954547 955335 + Sec-independent protein translocase%2C TatC subunit KEGG: dia:Dtpsy_0746 sec-independent protein translocase%2C TatC subunit~TIGRFAM: Sec-independent protein translocase%2C TatC subunit~PFAM: Sec-independent periplasmic protein translocase gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0898 Alide_0899 Alide_0899 Alide_0899 955409 956548 - HtrA2 peptidase PFAM: peptidase S1 and S6 chymotrypsin/Hap%3B PDZ/DHR/GLGF domain protein~KEGG: ajs:Ajs_0784 peptidase S1 and S6%2C chymotrypsin/Hap~SMART: PDZ/DHR/GLGF domain protein gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0899 Alide_0900 Alide_0900 Alide_0900 956639 957391 + protein of unknown function DUF34 PFAM: protein of unknown function DUF34~KEGG: dia:Dtpsy_0749 protein of unknown function DUF34 gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0900 Alide_0901 Alide_0901 Alide_0901 957454 958506 + 4-hydroxythreonine-4-phosphate dehydrogenase TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase~KEGG: ajs:Ajs_0787 4-hydroxythreonine-4-phosphate dehydrogenase~PFAM: Pyridoxal phosphate biosynthetic protein PdxA gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0901 Alide_0902 Alide_0902 Alide_0902 958573 959001 - large conductance mechanosensitive channel protein KEGG: dac:Daci_5504 large-conductance mechanosensitive channel~TIGRFAM: large conductance mechanosensitive channel protein~PFAM: large-conductance mechanosensitive channel gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0902 Alide_0903 Alide_0903 Alide_0903 959127 959726 + ubiquinol-cytochrome c reductase%2C iron-sulfur subunit TIGRFAM: ubiquinol-cytochrome c reductase%2C iron-sulfur subunit~KEGG: ajs:Ajs_0789 ubiquinol-cytochrome c reductase%2C iron-sulfur subunit~PFAM: Rieske [2Fe-2S] iron-sulphur domain%3B Ubiquitinol-cytochrome C reductase%2C Fe-S subunit%2C TAT signal gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0903 Alide_0904 Alide_0904 Alide_0904 959742 961163 + Cytochrome b/b6 domain protein PFAM: Cytochrome b/b6 domain~KEGG: dia:Dtpsy_0753 cytochrome b/b6 domain protein gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0904 Alide_0905 Alide_0905 Alide_0905 961180 961935 + cytochrome c1 KEGG: ajs:Ajs_0791 cytochrome c1~manually curated~PFAM: cytochrome c1 gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0905 Alide_0906 Alide_0906 Alide_0906 962034 962645 + Glutathione S-transferase domain protein PFAM: Glutathione S-transferase domain~KEGG: dia:Dtpsy_0755 glutathione S-transferase domain protein gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0906 Alide_0907 Alide_0907 Alide_0907 962678 963202 + Stringent starvation protein B PFAM: Stringent starvation protein B~KEGG: dia:Dtpsy_0756 stringent starvation protein B gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0907 Alide_0908 Alide_0908 Alide_0908 963385 963684 - hypothetical protein KEGG: dia:Dtpsy_0757 hypothetical protein gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0908 Alide_0909 Alide_0909 Alide_0909 963926 966685 + preprotein translocase%2C SecA subunit KEGG: dia:Dtpsy_0759 preprotein translocase subunit SecA~TIGRFAM: preprotein translocase%2C SecA subunit~PFAM: SecA DEAD domain protein%3B SecA preprotein cross-linking region%3B SecA Wing and Scaffold%3B SEC-C motif domain protein gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0909 Alide_0910 Alide_0910 Alide_0910 966761 967990 + arginine biosynthesis bifunctional protein ArgJ TIGRFAM: arginine biosynthesis bifunctional protein ArgJ~KEGG: ajs:Ajs_0797 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein~PFAM: arginine biosynthesis protein ArgJ gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0910 Alide_0911 Alide_0911 Alide_0911 968045 968917 + protein of unknown function DUF815 PFAM: protein of unknown function DUF815~KEGG: dia:Dtpsy_0761 protein of unknown function DUF815 gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0911 Alide_0912 Alide_0912 Alide_0912 968914 969339 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: dia:Dtpsy_0762 NUDIX hydrolase gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0912 Alide_0913 Alide_0913 Alide_0913 969402 969608 - protein of unknown function DUF329 PFAM: protein of unknown function DUF329~KEGG: dia:Dtpsy_0763 protein of unknown function DUF329 gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0913 Alide_0914 Alide_0914 Alide_0914 969610 970365 - protein of unknown function DUF1342 PFAM: protein of unknown function DUF1342~KEGG: dia:Dtpsy_0764 hypothetical protein gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0914 Alide_0915 Alide_0915 Alide_0915 970448 971062 - dephospho-CoA kinase TIGRFAM: dephospho-CoA kinase~KEGG: ajs:Ajs_0802 dephospho-CoA kinase~PFAM: Dephospho-CoA kinase gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0915 Alide_0916 Alide_0916 Alide_0916 971083 971961 - Prepilin peptidase KEGG: dia:Dtpsy_0766 prepilin peptidase~PFAM: peptidase A24A domain protein%3B peptidase A24A prepilin type IV gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0916 Alide_0917 Alide_0917 Alide_0917 971961 973178 - Type II secretion system F domain protein PFAM: Type II secretion system F domain~KEGG: ajs:Ajs_0804 type II secretion system protein gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0917 Alide_0918 Alide_0918 Alide_0918 973200 974939 - type IV-A pilus assembly ATPase PilB TIGRFAM: type IV-A pilus assembly ATPase PilB~PFAM: type II secretion system protein E%3B General secretory system II protein E domain protein~KEGG: ajs:Ajs_0805 type IV-A pilus assembly ATPase PilB~SMART: AAA ATPase gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0918 Alide_0919 Alide_0919 Alide_0919 975890 977584 + hypothetical protein KEGG: pca:Pcar_1822 putative DNA primase gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0919 Alide_0920 Alide_0920 Alide_0920 977965 978924 - hypothetical protein KEGG: lch:Lcho_1774 hypothetical protein gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0920 Alide_0921 Alide_0921 Alide_0921 979080 979994 - Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_0907 integrase catalytic subunit gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0921 Alide_0922 Alide_0922 Alide_0922 979991 980314 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0922 Alide_0923 Alide_0923 Alide_0923 980568 980942 - hypothetical protein KEGG: rpf:Rpic12D_2703 DNA binding domain protein%2C excisionase family gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0923 Alide_0924 Alide_0924 Alide_0924 981016 982605 - integrase family protein PFAM: integrase family protein~KEGG: rpf:Rpic12D_2659 integrase family protein gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0924 Alide_0925 Alide_0925 Alide_0925 982877 983926 - Polyprenyl synthetase PFAM: Polyprenyl synthetase~KEGG: ajs:Ajs_0840 dimethylallyltranstransferase gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0925 Alide_0926 Alide_0926 Alide_0926 984033 984344 + ribosomal protein L21 KEGG: ajs:Ajs_0841 50S ribosomal protein L21~TIGRFAM: ribosomal protein L21~PFAM: ribosomal protein L21 gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0926 Alide_0927 Alide_0927 Alide_0927 984360 984617 + ribosomal protein L27 KEGG: dia:Dtpsy_0771 50S ribosomal protein L27~TIGRFAM: ribosomal protein L27~PFAM: ribosomal protein L27 gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0927 Alide_0928 Alide_0928 Alide_0928 984743 985816 + GTP-binding protein Obg/CgtA KEGG: ajs:Ajs_0843 GTPase ObgE~TIGRFAM: GTP-binding protein Obg/CgtA~PFAM: GTP1/OBG sub domain protein%3B GTP-binding protein HSR1-related gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0928 Alide_0929 Alide_0929 Alide_0929 985881 987020 + glutamate 5-kinase TIGRFAM: glutamate 5-kinase~PFAM: aspartate/glutamate/uridylate kinase%3B PUA domain containing protein~KEGG: dia:Dtpsy_0773 gamma-glutamyl kinase~SMART: PUA domain containing protein gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0929 Alide_0930 Alide_0930 Alide_0930 987044 987718 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: dia:Dtpsy_0774 dinucleoside polyphosphate hydrolase gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0930 Alide_0931 Alide_0931 Alide_0931 987820 989565 + prolyl-tRNA synthetase KEGG: dia:Dtpsy_0775 prolyl-tRNA synthetase~TIGRFAM: prolyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B YbaK/prolyl-tRNA synthetase associated region%3B Anticodon-binding domain protein gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0931 Alide_0932 Alide_0932 Alide_0932 989562 990206 + Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic~KEGG: ajs:Ajs_0847 lytic transglycosylase%2C catalytic gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0932 Alide_0933 Alide_0933 Alide_0933 990182 991516 - protein of unknown function DUF21 PFAM: protein of unknown function DUF21%3B CBS domain containing protein%3B transporter-associated region~KEGG: dia:Dtpsy_0777 protein of unknown function DUF21 gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0933 Alide_0934 Alide_0934 Alide_0934 991560 992567 - AAA ATPase central domain protein KEGG: aav:Aave_3667 ATPase central domain-containing protein~PFAM: AAA ATPase central domain protein~SMART: AAA ATPase gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0934 Alide_0935 Alide_0935 Alide_0935 992708 993040 - glutaredoxin-like protein KEGG: dia:Dtpsy_0778 glutaredoxin-like protein~TIGRFAM: glutaredoxin-like protein~PFAM: glutaredoxin gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0935 Alide_0936 Alide_0936 Alide_0936 993097 993942 - protein-(glutamine-N5) methyltransferase%2C release factor-specific KEGG: ajs:Ajs_0850 HemK family modification methylase~TIGRFAM: protein-(glutamine-N5) methyltransferase%2C release factor-specific%3B modification methylase%2C HemK family~PFAM: methyltransferase small gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0936 Alide_0937 Alide_0937 Alide_0937 993985 995067 - peptide chain release factor 1 KEGG: ajs:Ajs_0851 peptide chain release factor 1~TIGRFAM: peptide chain release factor 1~PFAM: Class I peptide chain release factor%3B PCRF domain protein gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0937 Alide_0938 Alide_0938 Alide_0938 995168 996481 - glutamyl-tRNA reductase KEGG: dia:Dtpsy_0781 glutamyl-tRNA reductase~TIGRFAM: glutamyl-tRNA reductase~PFAM: Shikimate/quinate 5-dehydrogenase%3B Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductase-like gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0938 Alide_0939 Alide_0939 Alide_0939 996556 996831 + hypothetical protein KEGG: dia:Dtpsy_0782 hypothetical protein gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0939 Alide_0940 Alide_0940 Alide_0940 996948 997841 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dia:Dtpsy_0783 transcriptional regulator%2C LysR family gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0940 Alide_0941 Alide_0941 Alide_0941 997967 998950 + hypothetical protein KEGG: ajs:Ajs_0855 hypothetical protein gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0941 Alide_0942 Alide_0942 Alide_0942 998950 999852 + N-formylglutamate amidohydrolase PFAM: N-formylglutamate amidohydrolase~KEGG: ajs:Ajs_0856 N-formylglutamate amidohydrolase gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0942 Alide_0943 Alide_0943 Alide_0943 999896 1002328 - MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel~KEGG: ajs:Ajs_0857 MscS mechanosensitive ion channel gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0943 Alide_0944 Alide_0944 Alide_0944 1002357 1003106 - glycerophosphoryl diester phosphodiesterase PFAM: glycerophosphoryl diester phosphodiesterase~KEGG: dia:Dtpsy_0787 glycerophosphodiester phosphodiesterase gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0944 Alide_0945 Alide_0945 Alide_0945 1003113 1004120 - ABC transporter related protein KEGG: ctt:CtCNB1_0786 sn-glycerol-3-phosphate transport ATP-binding protein~PFAM: ABC transporter related%3B Transport-associated OB domain-containing protein~SMART: AAA ATPase gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0945 Alide_0946 Alide_0946 Alide_0946 1004181 1005029 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_0789 binding-protein-dependent transport systems inner membrane component gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0946 Alide_0947 Alide_0947 Alide_0947 1005037 1005918 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ctt:CtCNB1_0788 sn-glycerol-3-phosphate transport systempermease protein UgpA gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0947 Alide_0948 Alide_0948 Alide_0948 1005989 1007302 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: ajs:Ajs_0862 extracellular solute-binding protein gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0948 Alide_0949 Alide_0949 Alide_0949 1007634 1008863 + D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region%3B amino acid-binding ACT domain protein~KEGG: ajs:Ajs_0863 D-3-phosphoglycerate dehydrogenase gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0949 Alide_0950 Alide_0950 Alide_0950 1008985 1012905 + FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein%3B protein of unknown function DUF224 cysteine-rich region domain protein~KEGG: dia:Dtpsy_0793 FAD linked oxidase domain protein gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0950 Alide_0951 Alide_0951 Alide_0951 1012902 1013354 + histidine triad (HIT) protein PFAM: histidine triad (HIT) protein~KEGG: ajs:Ajs_0865 histidine triad (HIT) protein gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0951 Alide_0952 Alide_0952 Alide_0952 1013431 1013850 + protein of unknown function DUF971 KEGG: dia:Dtpsy_0795 protein of unknown function DUF971 gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0952 Alide_0953 Alide_0953 Alide_0953 1013928 1014659 + ubiquinone/menaquinone biosynthesis methyltransferase KEGG: dia:Dtpsy_0796 ubiquinone/menaquinone biosynthesis methyltransferase~TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase~PFAM: UbiE/COQ5 methyltransferase gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0953 Alide_0954 Alide_0954 Alide_0954 1014701 1015699 + import inner membrane translocase subunit Tim44 PFAM: import inner membrane translocase subunit Tim44~KEGG: dia:Dtpsy_0797 import inner membrane translocase subunit Tim44 gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0954 Alide_0955 Alide_0955 Alide_0955 1015774 1016334 + hypothetical protein KEGG: dia:Dtpsy_0798 hypothetical protein gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0955 Alide_0956 Alide_0956 Alide_0956 1016331 1017896 + 2-polyprenylphenol 6-hydroxylase KEGG: dia:Dtpsy_0799 putative ubiquinone biosynthesis protein UbiB~TIGRFAM: 2-polyprenylphenol 6-hydroxylase~PFAM: ABC-1 domain-containing protein gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0956 Alide_0957 Alide_0957 Alide_0957 1017948 1019399 + Na+/solute symporter PFAM: Na+/solute symporter~KEGG: dia:Dtpsy_0800 Na+/solute symporter gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0957 Alide_0958 Alide_0958 Alide_0958 1019462 1019743 + regulatory protein%2C FmdB family KEGG: dia:Dtpsy_0801 regulatory protein%2C FmdB family~TIGRFAM: regulatory protein%2C FmdB family~PFAM: Putative regulatory protein FmdB gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0958 Alide_0959 Alide_0959 Alide_0959 1019757 1020380 + protein of unknown function DUF502 PFAM: protein of unknown function DUF502~KEGG: dia:Dtpsy_0802 protein of unknown function DUF502 gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0959 Alide_0960 Alide_0960 Alide_0960 1020481 1022280 + aspartyl-tRNA synthetase KEGG: dia:Dtpsy_0803 aspartyl-tRNA synthetase~TIGRFAM: aspartyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B nucleic acid binding OB-fold tRNA/helicase-type%3B GAD domain protein gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0960 Alide_0961 Alide_0961 Alide_0961 1022342 1022788 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: dia:Dtpsy_0805 NUDIX hydrolase gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0961 Alide_0962 Alide_0962 Alide_0962 1022791 1023552 + Endonuclease/exonuclease/phosphatase PFAM: Endonuclease/exonuclease/phosphatase~KEGG: dia:Dtpsy_0806 endonuclease/exonuclease/phosphatase gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0962 Alide_0963 Alide_0963 Alide_0963 1023695 1024924 + phospholipase D/transphosphatidylase KEGG: dia:Dtpsy_0807 phospholipase D/transphosphatidylase gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0963 Alide_0964 Alide_0964 Alide_0964 1025029 1025754 + GTP cyclohydrolase I KEGG: dia:Dtpsy_0808 GTP cyclohydrolase I~PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0964 Alide_0965 Alide_0965 Alide_0965 1025756 1026178 + BLUF domain protein PFAM: BLUF domain protein~KEGG: dia:Dtpsy_0809 BLUF domain protein gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0965 Alide_0966 Alide_0966 Alide_0966 1026400 1027281 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: dia:Dtpsy_0810 protein of unknown function DUF6 transmembrane gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0966 Alide_0967 Alide_0967 Alide_0967 1027311 1029131 + ATP-binding region ATPase domain protein KEGG: dar:Daro_2490 sensor histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0967 Alide_0968 Alide_0968 Alide_0968 1029128 1029757 + response regulator receiver KEGG: dar:Daro_2491 LuxR response regulator receiver~PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0968 Alide_0969 Alide_0969 Alide_0969 1029866 1030876 - cytochrome c class I PFAM: cytochrome c class I~KEGG: azo:azo2669 cytochrome c family protein gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0969 Alide_0970 Alide_0970 Alide_0970 1031012 1031869 + hypothetical protein KEGG: aav:Aave_3628 hypothetical protein gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0970 Alide_0971 Alide_0971 Alide_0971 1032021 1032632 - hypothetical protein KEGG: dia:Dtpsy_0813 hypothetical protein gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0971 Alide_0972 Alide_0972 Alide_0972 1032732 1033388 + Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: ajs:Ajs_0885 lysine exporter protein LysE/YggA gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0972 Alide_0973 Alide_0973 Alide_0973 1033449 1034855 - Amidase PFAM: Amidase~KEGG: dia:Dtpsy_0815 amidase gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0973 Alide_0974 Alide_0974 Alide_0974 1034852 1036342 - extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: dia:Dtpsy_0816 extracellular solute-binding protein family 5 gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0974 Alide_0975 Alide_0975 Alide_0975 1036448 1037314 - ABC transporter related protein KEGG: dia:Dtpsy_0817 ABC transporter related~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0975 Alide_0976 Alide_0976 Alide_0976 1037311 1038285 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~KEGG: dia:Dtpsy_0818 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~SMART: AAA ATPase gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0976 Alide_0977 Alide_0977 Alide_0977 1038559 1039422 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_0819 binding-protein-dependent transport systems inner membrane component gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0977 Alide_0978 Alide_0978 Alide_0978 1039419 1040381 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_0820 binding-protein-dependent transport systems inner membrane component gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0978 Alide_0979 Alide_0979 Alide_0979 1040526 1040783 + 4Fe-4S ferredoxin iron-sulfur binding domain protein KEGG: dia:Dtpsy_0821 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0979 Alide_0980 Alide_0980 Alide_0980 1040845 1041474 - peptidyl-tRNA hydrolase TIGRFAM: peptidyl-tRNA hydrolase~KEGG: dia:Dtpsy_0822 peptidyl-tRNA hydrolase~PFAM: peptidyl-tRNA hydrolase gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0980 Alide_0981 Alide_0981 Alide_0981 1041584 1042210 - ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 KEGG: dia:Dtpsy_0823 50S ribosomal protein L25/general stress protein Ctc~TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5~PFAM: Ribosomal protein L25-like gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0981 Alide_0982 Alide_0982 Alide_0982 1042312 1043271 - ribose-phosphate pyrophosphokinase TIGRFAM: ribose-phosphate pyrophosphokinase~KEGG: dia:Dtpsy_0824 ribose-phosphate pyrophosphokinase~PFAM: phosphoribosyltransferase gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0982 Alide_0983 Alide_0983 Alide_0983 1043491 1044357 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~KEGG: ajs:Ajs_0896 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase~PFAM: GHMP kinase gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0983 Alide_0984 Alide_0984 Alide_0984 1044362 1044859 - outer membrane lipoprotein LolB PFAM: outer membrane lipoprotein LolB~KEGG: dia:Dtpsy_0826 putative lipoprotein gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0984 Alide_0985 Alide_0985 Alide_0985 1044856 1046637 - Tetratricopeptide TPR_1 repeat-containing protein PFAM: Tetratricopeptide TPR_1 repeat-containing protein~KEGG: ajs:Ajs_0898 TPR repeat-containing protein gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0985 Alide_0986 Alide_0986 Alide_0986 1046667 1047482 + formamidopyrimidine-DNA glycosylase TIGRFAM: formamidopyrimidine-DNA glycosylase~KEGG: ajs:Ajs_0899 formamidopyrimidine-DNA glycosylase~PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein%3B DNA glycosylase/AP lyase%2C H2TH DNA-binding gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0986 Alide_0987 Alide_0987 Alide_0987 1047552 1049537 + hypothetical protein manually curated~KEGG: dia:Dtpsy_0829 hypothetical protein gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0987 Alide_0988 Alide_0988 Alide_0988 1049534 1050592 + A/G-specific adenine glycosylase TIGRFAM: A/G-specific adenine glycosylase~PFAM: HhH-GPD family protein%3B iron-sulfur cluster loop~KEGG: dia:Dtpsy_0830 A/G-specific adenine glycosylase~SMART: HhH-GPD family protein%3B iron-sulfur cluster loop gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0988 Alide_0989 Alide_0989 Alide_0989 1050706 1051569 - hypothetical protein KEGG: dia:Dtpsy_0831 hypothetical protein gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0989 Alide_0990 Alide_0990 Alide_0990 1051575 1053248 - DNA repair protein RecN KEGG: ajs:Ajs_0903 DNA repair protein RecN~TIGRFAM: DNA repair protein RecN~PFAM: SMC domain protein gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0990 Alide_0991 Alide_0991 Alide_0991 1053251 1054147 - ATP-NAD/AcoX kinase PFAM: ATP-NAD/AcoX kinase~KEGG: dia:Dtpsy_0833 NAD(+)/NADH kinase family protein gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0991 Alide_0992 Alide_0992 Alide_0992 1054176 1055180 + heat-inducible transcription repressor HrcA KEGG: dia:Dtpsy_0847 heat-inducible transcription repressor~TIGRFAM: heat-inducible transcription repressor HrcA~PFAM: Winged helix-turn-helix transcription repressor%2C HrcA-like gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0992 Alide_0993 Alide_0993 Alide_0993 1055520 1056194 + Dimethylmenaquinone methyltransferase KEGG: dac:Daci_4429 hypothetical protein~manually curated~PFAM: Dimethylmenaquinone methyltransferase gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0993 Alide_0994 Alide_0994 Alide_0994 1056191 1057147 + D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region~KEGG: bxe:Bxe_B0983 putative 2-hydroxyacid dehydrogenase gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0994 Alide_0995 Alide_0995 Alide_0995 1057210 1058112 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: vap:Vapar_3933 transcriptional regulator%2C LysR family gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0995 Alide_0996 Alide_0996 Alide_0996 1058264 1059484 + aminotransferase class I and II KEGG: mno:Mnod_0890 aminotransferase class I and II~manually curated~PFAM: aminotransferase class I and II gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0996 Alide_0997 Alide_0997 Alide_0997 1059649 1060347 + polar amino acid ABC transporter%2C inner membrane subunit KEGG: psp:PSPPH_2462 glutamine ABC transporter%2C permease protein~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0997 Alide_0998 Alide_0998 Alide_0998 1060350 1061096 + polar amino acid ABC transporter%2C inner membrane subunit KEGG: vap:Vapar_6370 polar amino acid ABC transporter%2C inner membrane subunit~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0998 Alide_0999 Alide_0999 Alide_0999 1061107 1061877 + ABC transporter related protein KEGG: rsl:RPSI07_mp0646 amino-acid ATP-binding ABC transporter protein~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_0999 Alide_1000 Alide_1000 Alide_1000 1061917 1062750 + extracellular solute-binding protein family 3 KEGG: mno:Mnod_0891 extracellular solute-binding protein family 3~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3 gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1000 Alide_1001 Alide_1001 Alide_1001 1062862 1063722 + extracellular solute-binding protein family 3 KEGG: avi:Avi_7667 ABC transporter substrate binding protein (amino acid)~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3 gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1001 Alide_1002 Alide_1002 Alide_1002 1063763 1064500 + Asp/Glu/hydantoin racemase PFAM: Asp/Glu/hydantoin racemase~KEGG: mno:Mnod_0887 Asp/Glu/hydantoin racemase gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1002 Alide_1003 Alide_1003 Alide_1003 1064520 1064936 + biotin carboxyl carrier protein of acetyl-CoA carboxylase manually curated~KEGG: bbr:BB4733 biotin carboxyl carrier protein of acetyl-CoA carboxylase gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1003 Alide_1004 Alide_1004 Alide_1004 1064933 1065616 + Allophanate hydrolase subunit 1 KEGG: vap:Vapar_6364 allophanate hydrolase subunit 1~PFAM: Allophanate hydrolase subunit 1~SMART: Allophanate hydrolase subunit 1 gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1004 Alide_1005 Alide_1005 Alide_1005 1065613 1066590 + urea amidolyase related protein SMART: Allophanate hydrolase subunit 2~TIGRFAM: urea amidolyase related protein~KEGG: rsl:RPSI07_mp0640 conserved hypothethical protein%2C allophanate hydrolase subunit 2 domain~PFAM: Allophanate hydrolase subunit 2 gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1005 Alide_1006 Alide_1006 Alide_1006 1066603 1067367 + LamB/YcsF family protein PFAM: LamB/YcsF family protein~KEGG: mno:Mnod_0902 LamB/YcsF family protein gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1006 Alide_1007 Alide_1007 Alide_1007 1067383 1067856 + acetyl-CoA carboxylase%2C biotin carboxyl carrier protein KEGG: bph:Bphy_2629 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxyl carrier protein~PFAM: biotin/lipoyl attachment domain-containing protein gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1007 Alide_1008 Alide_1008 Alide_1008 1067860 1069203 + acetyl-CoA carboxylase%2C biotin carboxylase KEGG: bbr:BB4735 biotin carboxylase~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxylase~PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B biotin carboxylase domain protein gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1008 Alide_1009 Alide_1009 Alide_1009 1069795 1070856 + Sporulation domain-containing protein PFAM: Sporulation domain-containing protein~KEGG: aav:Aave_3575 sporulation domain-containing protein gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1009 Alide_1010 Alide_1010 Alide_1010 1070930 1071271 + hypothetical protein KEGG: ajs:Ajs_0920 hypothetical protein gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1010 Alide_1011 Alide_1011 Alide_1011 1071288 1072523 - oxygen-independent coproporphyrinogen III oxidase TIGRFAM: oxygen-independent coproporphyrinogen III oxidase~PFAM: Radical SAM domain protein%3B HemN domain protein~KEGG: dia:Dtpsy_0856 oxygen-independent coproporphyrinogen III oxidase~SMART: Elongator protein 3/MiaB/NifB gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1011 Alide_1012 Alide_1012 Alide_1012 1072615 1073232 - non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family KEGG: dia:Dtpsy_0857 putative deoxyribonucleotide triphosphate pyrophosphatase~TIGRFAM: non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family~PFAM: Ham1 family protein gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1012 Alide_1013 Alide_1013 Alide_1013 1073278 1074015 - ribonuclease PH TIGRFAM: ribonuclease PH~KEGG: dia:Dtpsy_0858 ribonuclease PH~PFAM: 3' exoribonuclease%3B Exoribonuclease%2C phosphorolytic domain 2 gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1013 Alide_1014 Alide_1014 Alide_1014 1074083 1074985 - Stage II sporulation protein E KEGG: dia:Dtpsy_0859 protein serine/threonine phosphatase~PFAM: Stage II sporulation protein E~SMART: protein phosphatase 2C domain protein gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1014 Alide_1015 Alide_1015 Alide_1015 1074982 1075998 - Serine/threonine-protein kinase-like domain protein KEGG: dia:Dtpsy_0860 serine/threonine protein kinase~PFAM: Serine/threonine-protein kinase-like domain~SMART: serine/threonine protein kinase%3B Tyrosine-protein kinase%2C catalytic domain gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1015 Alide_1016 Alide_1016 Alide_1016 1076094 1076987 + domain of unknown function DUF1732 PFAM: domain of unknown function DUF1732%3B YicC-like domain-containing protein~KEGG: ajs:Ajs_0926 hypothetical protein gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1016 Alide_1017 Alide_1017 Alide_1017 1077019 1080456 - hypothetical protein KEGG: cag:Cagg_1487 hypothetical protein gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1017 Alide_1018 Alide_1018 Alide_1018 1080477 1082774 - hypothetical protein KEGG: cag:Cagg_1488 hypothetical protein gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1018 Alide_1019 Alide_1019 Alide_1019 1082771 1085686 - hypothetical protein KEGG: bra:BRADO4376 hypothetical protein gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1019 Alide_1020 Alide_1020 Alide_1020 1085683 1088175 - hypothetical protein KEGG: chl:Chy400_2341 hypothetical protein gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1020 Alide_1021 Alide_1021 Alide_1021 1088172 1088540 - GPW/gp25 family protein PFAM: GPW/gp25 family protein~KEGG: cag:Cagg_1491 gpW/GP25 family protein gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1021 Alide_1022 Alide_1022 Alide_1022 1088544 1088864 - hypothetical protein KEGG: aba:Acid345_0852 hypothetical protein gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1022 Alide_1023 Alide_1023 Alide_1023 1088875 1089384 - hypothetical protein KEGG: nde:NIDE2232 hypothetical protein gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1023 Alide_1024 Alide_1024 Alide_1024 1089396 1090538 - hypothetical protein KEGG: nde:NIDE2231 hypothetical protein gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1024 Alide_1025 Alide_1025 Alide_1025 1090541 1090903 - hypothetical protein KEGG: aba:Acid345_0855 hypothetical protein gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1025 Alide_1026 Alide_1026 Alide_1026 1090906 1091562 - hypothetical protein KEGG: nde:NIDE2229 hypothetical protein gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1026 Alide_1027 Alide_1027 Alide_1027 1091579 1092934 - hypothetical protein KEGG: scl:sce1839 hypothetical protein gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1027 Alide_1028 Alide_1028 Alide_1028 1093110 1093376 - hypothetical protein KEGG: nde:NIDE2225 hypothetical protein gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1028 Alide_1029 Alide_1029 Alide_1029 1093373 1095898 - hypothetical protein KEGG: scl:sce2110 hypothetical protein gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1029 Alide_1030 Alide_1030 Alide_1030 1095895 1097835 - AAA ATPase central domain protein KEGG: nde:NIDE2224 putative ATPase~PFAM: AAA ATPase central domain protein~SMART: AAA ATPase gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1030 Alide_1031 Alide_1031 Alide_1031 1097832 1099169 - hypothetical protein KEGG: nde:NIDE2223 hypothetical protein gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1031 Alide_1032 Alide_1032 Alide_1032 1099166 1099906 - hypothetical protein KEGG: twh:TWT151 hypothetical protein gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1032 Alide_1033 Alide_1033 Alide_1033 1099903 1100622 - hypothetical protein KEGG: scl:sce2087 hypothetical protein gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1033 Alide_1034 Alide_1034 Alide_1034 1100639 1101163 - conserved hypothetical protein TIGRFAM: conserved hypothetical protein~KEGG: cag:Cagg_1504 hypothetical protein gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1034 Alide_1035 Alide_1035 Alide_1035 1101179 1103071 - phage tail sheath protein KEGG: nha:Nham_0832 phage tail sheath protein gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1035 Alide_1036 Alide_1036 Alide_1036 1103463 1104083 + guanylate kinase SMART: guanylate kinase/L-type calcium channel region~TIGRFAM: guanylate kinase~KEGG: dia:Dtpsy_0862 guanylate kinase~PFAM: guanylate kinase gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1036 Alide_1037 Alide_1037 Alide_1037 1104103 1104306 + DNA-directed RNA polymerase%2C omega subunit KEGG: dia:Dtpsy_0863 DNA-directed RNA polymerase subunit omega~TIGRFAM: DNA-directed RNA polymerase%2C omega subunit~PFAM: RNA polymerase Rpb6 gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1037 Alide_1038 Alide_1038 Alide_1038 1104407 1106671 + RelA/SpoT family protein SMART: metal-dependent phosphohydrolase HD region~TIGRFAM: RelA/SpoT family protein~KEGG: dia:Dtpsy_0864 (p)ppGpp synthetase I%2C SpoT/RelA~PFAM: RelA/SpoT domain protein%3B metal-dependent phosphohydrolase HD sub domain%3B TGS domain-containing protein%3B amino acid-binding ACT domain protein gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1038 Alide_1039 Alide_1039 Alide_1039 1106678 1107244 - transcription elongation factor GreB KEGG: ajs:Ajs_0950 transcription elongation factor GreB~TIGRFAM: transcription elongation factor GreB~PFAM: transcription elongation factor GreA/GreB domain-containing protein gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1039 Alide_1040 Alide_1040 Alide_1040 1107573 1107851 - hypothetical protein KEGG: dia:Dtpsy_0866 hypothetical protein gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1040 Alide_1041 Alide_1041 Alide_1041 1107976 1108332 + ribosomal protein S15 KEGG: dia:Dtpsy_0867 30S ribosomal protein S15~TIGRFAM: ribosomal protein S15~PFAM: ribosomal protein S15 gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1041 Alide_1042 Alide_1042 Alide_1042 1108563 1110758 + polyribonucleotide nucleotidyltransferase SMART: KH domain protein~TIGRFAM: polyribonucleotide nucleotidyltransferase~KEGG: ctt:CtCNB1_1057 3' exoribonuclease~PFAM: 3' exoribonuclease%3B Exoribonuclease%2C phosphorolytic domain 2%3B Polynucleotide phosphorylase%2C phosphorolytic RNA-binding%3B K Homology%2C type 1%2C subgroup%3B RNA binding S1 domain protein gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1042 Alide_1043 Alide_1043 Alide_1043 1110869 1111873 + NAD(P)H quinone oxidoreductase%2C PIG3 family KEGG: dia:Dtpsy_0869 NAD(P)H quinone oxidoreductase%2C PIG3 family~TIGRFAM: NAD(P)H quinone oxidoreductase%2C PIG3 family~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1043 Alide_1044 Alide_1044 Alide_1044 1111861 1112664 + triosephosphate isomerase TIGRFAM: triosephosphate isomerase~KEGG: dia:Dtpsy_0870 triosephosphate isomerase~PFAM: triosephosphate isomerase gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1044 Alide_1045 Alide_1045 Alide_1045 1112661 1113026 + preprotein translocase%2C SecG subunit KEGG: dia:Dtpsy_0871 preprotein translocase%2C SecG subunit~TIGRFAM: preprotein translocase%2C SecG subunit~PFAM: Preprotein translocase SecG subunit gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1045 Alide_1046 Alide_1046 Alide_1046 1113285 1113674 + NADH-ubiquinone/plastoquinone oxidoreductase chain 3 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3~KEGG: ajs:Ajs_0957 NADH-ubiquinone/plastoquinone oxidoreductase%2C chain 3 gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1046 Alide_1047 Alide_1047 Alide_1047 1113711 1114190 + NADH-quinone oxidoreductase%2C B subunit TIGRFAM: NADH-quinone oxidoreductase%2C B subunit~KEGG: dia:Dtpsy_0873 NADH dehydrogenase subunit B~PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1047 Alide_1048 Alide_1048 Alide_1048 1114200 1114808 + NADH (or F420H2) dehydrogenase%2C subunit C KEGG: aav:Aave_1265 NADH (or F420H2) dehydrogenase%2C subunit C~TIGRFAM: NADH (or F420H2) dehydrogenase%2C subunit C~PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1048 Alide_1049 Alide_1049 Alide_1049 1114836 1116089 + NADH dehydrogenase I%2C D subunit TIGRFAM: NADH dehydrogenase I%2C D subunit~KEGG: dia:Dtpsy_0875 NADH dehydrogenase subunit D~PFAM: NADH-ubiquinone oxidoreductase chain 49kDa gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1049 Alide_1050 Alide_1050 Alide_1050 1116086 1116577 + NADH-quinone oxidoreductase%2C E subunit KEGG: dia:Dtpsy_0876 NADH-quinone oxidoreductase%2C E subunit~TIGRFAM: NADH-quinone oxidoreductase%2C E subunit~PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1050 Alide_1051 Alide_1051 Alide_1051 1116574 1117923 + NADH-quinone oxidoreductase%2C F subunit TIGRFAM: NADH-quinone oxidoreductase%2C F subunit~KEGG: dia:Dtpsy_0877 NADH-quinone oxidoreductase%2C F subunit~PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit%3B Soluble ligand binding domain%3B NADH ubiquinone oxidoreductase%2C F subunit%2C iron sulphur binding gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1051 Alide_1052 Alide_1052 Alide_1052 1117939 1120059 + NADH-quinone oxidoreductase%2C chain G KEGG: aav:Aave_1269 NADH dehydrogenase subunit G~TIGRFAM: NADH-quinone oxidoreductase%2C chain G~PFAM: NADH:ubiquinone oxidoreductase%2C subunit G%2C iron-sulphur binding%3B ferredoxin%3B molybdopterin oxidoreductase gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1052 Alide_1053 Alide_1053 Alide_1053 1120056 1121132 + respiratory-chain NADH dehydrogenase subunit 1 PFAM: respiratory-chain NADH dehydrogenase subunit 1~KEGG: dia:Dtpsy_0879 NADH dehydrogenase (quinone) gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1053 Alide_1054 Alide_1054 Alide_1054 1121149 1121661 + NADH-quinone oxidoreductase%2C chain I KEGG: dia:Dtpsy_0880 NADH dehydrogenase subunit I~TIGRFAM: NADH-quinone oxidoreductase%2C chain I gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1054 Alide_1055 Alide_1055 Alide_1055 1121703 1122371 + NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6~KEGG: dia:Dtpsy_0881 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1055 Alide_1056 Alide_1056 Alide_1056 1122368 1122676 + NADH-ubiquinone oxidoreductase chain 4L PFAM: NADH-ubiquinone oxidoreductase chain 4L~KEGG: dia:Dtpsy_0882 NADH-ubiquinone oxidoreductase chain 4L gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1056 Alide_1057 Alide_1057 Alide_1057 1122733 1124742 + proton-translocating NADH-quinone oxidoreductase%2C chain L KEGG: dia:Dtpsy_0883 proton-translocating NADH-quinone oxidoreductase%2C chain L~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain L~PFAM: NADH/Ubiquinone/plastoquinone (complex I)%3B NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1057 Alide_1058 Alide_1058 Alide_1058 1124756 1126231 + proton-translocating NADH-quinone oxidoreductase%2C chain M KEGG: dia:Dtpsy_0884 proton-translocating NADH-quinone oxidoreductase%2C chain M~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain M~PFAM: NADH/Ubiquinone/plastoquinone (complex I) gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1058 Alide_1059 Alide_1059 Alide_1059 1126253 1127749 + proton-translocating NADH-quinone oxidoreductase%2C chain N KEGG: dia:Dtpsy_0885 NADH dehydrogenase subunit N~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain N~PFAM: NADH/Ubiquinone/plastoquinone (complex I) gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1059 Alide_1060 Alide_1060 Alide_1060 1127769 1128086 + putative transmembrane protein KEGG: dia:Dtpsy_0886 putative transmembrane protein gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1060 Alide_1061 Alide_1061 Alide_1061 1128097 1128561 + protein of unknown function DUF1178 KEGG: dia:Dtpsy_0887 protein of unknown function DUF1178~manually curated~PFAM: protein of unknown function DUF1178 gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1061 Alide_1062 Alide_1062 Alide_1062 1128568 1128936 - hypothetical protein KEGG: ajs:Ajs_0974 hypothetical protein gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1062 Alide_1063 Alide_1063 Alide_1063 1128980 1130398 - Glutamate dehydrogenase (NADP(+)) KEGG: ajs:Ajs_0977 glutamate dehydrogenase~PFAM: Glu/Leu/Phe/Val dehydrogenase %3B Glu/Leu/Phe/Val dehydrogenase dimerisation region gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1063 Alide_1064 Alide_1064 Alide_1064 1130631 1132607 - DNA mismatch repair protein MutL KEGG: ajs:Ajs_0978 DNA mismatch repair protein MutL~TIGRFAM: DNA mismatch repair protein MutL~PFAM: MutL dimerisation%3B DNA mismatch repair protein domain protein%3B ATP-binding region ATPase domain protein gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1064 Alide_1065 Alide_1065 Alide_1065 1132615 1132869 - 17 kDa surface antigen KEGG: dia:Dtpsy_0894 17 kDa surface antigen gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1065 Alide_1066 Alide_1066 Alide_1066 1133095 1133742 + SNARE associated Golgi protein-like protein PFAM: SNARE associated Golgi protein~KEGG: dia:Dtpsy_1467 SNARE associated Golgi protein gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1066 Alide_1067 Alide_1067 Alide_1067 1133746 1135026 - guanine deaminase KEGG: vap:Vapar_3881 guanine deaminase~TIGRFAM: guanine deaminase~PFAM: amidohydrolase gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1067 Alide_1068 Alide_1068 Alide_1068 1135031 1136386 - Xanthine/uracil/vitamin C permease PFAM: Xanthine/uracil/vitamin C permease~KEGG: dac:Daci_5908 xanthine/uracil/vitamin C permease gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1068 Alide_1069 Alide_1069 Alide_1069 1136417 1137430 - regulatory protein LysR PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: vap:Vapar_3905 transcriptional regulator%2C LysR family gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1069 Alide_1070 Alide_1070 Alide_1070 1137427 1139856 - xanthine dehydrogenase%2C molybdopterin binding subunit KEGG: vap:Vapar_3906 xanthine dehydrogenase%2C molybdopterin binding subunit~TIGRFAM: xanthine dehydrogenase%2C molybdopterin binding subunit~PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding%3B aldehyde oxidase and xanthine dehydrogenase a/b hammerhead gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1070 Alide_1071 Alide_1071 Alide_1071 1139866 1141425 - xanthine dehydrogenase%2C small subunit KEGG: dac:Daci_5910 xanthine dehydrogenase%2C small subunit~TIGRFAM: xanthine dehydrogenase%2C small subunit~PFAM: molybdopterin dehydrogenase FAD-binding%3B [2Fe-2S]-binding domain-containing protein%3B CO dehydrogenase flavoprotein domain protein gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1071 Alide_1072 Alide_1072 Alide_1072 1141635 1141970 - Cupin 2 conserved barrel domain protein PFAM: Cupin 2 conserved barrel domain protein~KEGG: har:HEAR2969 hypothetical protein gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1072 Alide_1073 Alide_1073 Alide_1073 1141995 1143401 - cell wall hydrolase/autolysin KEGG: ajs:Ajs_0983 N-acetylmuramoyl-L-alanine amidase~PFAM: cell wall hydrolase/autolysin~SMART: cell wall hydrolase/autolysin gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1073 Alide_1074 Alide_1074 Alide_1074 1143398 1143907 - Uncharacterized protein family UPF0079%2C ATPase KEGG: dia:Dtpsy_0899 protein of unknown function UPF0079~manually curated~PFAM: Uncharacterised protein family UPF0079%2C ATPase gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1074 Alide_1075 Alide_1075 Alide_1075 1143902 1144972 + pseudogene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1075 Alide_1076 Alide_1076 Alide_1076 1145031 1145948 - Auxin Efflux Carrier PFAM: Auxin Efflux Carrier~KEGG: dia:Dtpsy_0901 auxin efflux carrier gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1076 Alide_1077 Alide_1077 Alide_1077 1146141 1147106 + hypothetical protein KEGG: dia:Dtpsy_0902 hypothetical protein gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1077 Alide_1078 Alide_1078 Alide_1078 1147154 1148053 + tyrosine recombinase XerD KEGG: dia:Dtpsy_0903 tyrosine recombinase XerD~TIGRFAM: tyrosine recombinase XerD~PFAM: integrase family protein%3B integrase domain protein SAM domain protein gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1078 Alide_1079 Alide_1079 Alide_1079 1148326 1149387 - PAS sensor protein KEGG: ctt:CtCNB1_2005 methyl-accepting chemotaxis sensory transducer~TIGRFAM: PAS sensor protein~PFAM: PAS fold-3 domain protein gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1079 Alide_1080 Alide_1080 Alide_1080 1149659 1150642 + hypothetical protein KEGG: ajs:Ajs_0989 hypothetical protein gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1080 Alide_1081 Alide_1081 Alide_1081 1150662 1151948 - EAL domain protein KEGG: dia:Dtpsy_0905 diguanylate phosphodiesterase~PFAM: EAL domain protein%3B Metal-dependent hydrolase HDOD~SMART: EAL domain protein gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1081 Alide_1082 Alide_1082 Alide_1082 1151986 1153254 - EAL domain protein KEGG: dia:Dtpsy_0906 diguanylate phosphodiesterase~PFAM: EAL domain protein%3B Metal-dependent hydrolase HDOD~SMART: EAL domain protein gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1082 Alide_1083 Alide_1083 Alide_1083 1153343 1154149 - protein of unknown function DUF455 KEGG: dia:Dtpsy_0907 protein of unknown function DUF455~manually curated~PFAM: protein of unknown function DUF455 gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1083 Alide_1084 Alide_1084 Alide_1084 1154199 1154723 + transferase hexapeptide protein KEGG: ajs:Ajs_0993 transferase hexapeptide protein gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1084 Alide_1085 Alide_1085 Alide_1085 1154733 1155719 + Hsp33 protein PFAM: Hsp33 protein~KEGG: ajs:Ajs_0994 HSP33 protein gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1085 Alide_1086 Alide_1086 Alide_1086 1155784 1156545 + extracellular solute-binding protein family 3 KEGG: rfr:Rfer_1525 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3%3B ionotropic glutamate receptor gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1086 Alide_1087 Alide_1087 Alide_1087 1156576 1157265 + polar amino acid ABC transporter%2C inner membrane subunit KEGG: rfr:Rfer_1524 amino acid ABC transporter permease~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1087 Alide_1088 Alide_1088 Alide_1088 1157262 1157975 + polar amino acid ABC transporter%2C inner membrane subunit KEGG: rfr:Rfer_1523 amino acid ABC transporter permease~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1088 Alide_1089 Alide_1089 Alide_1089 1157986 1158765 + ABC transporter related protein KEGG: rfr:Rfer_1521 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1089 Alide_1090 Alide_1090 Alide_1090 1158835 1159122 - Septum formation initiator PFAM: Septum formation initiator~KEGG: dia:Dtpsy_0911 septum formation initiator gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1090 Alide_1091 Alide_1091 Alide_1091 1159150 1160436 - enolase TIGRFAM: enolase~KEGG: aav:Aave_1322 phosphopyruvate hydratase~PFAM: Enolase-like gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1091 Alide_1092 Alide_1092 Alide_1092 1160619 1160909 - protein of unknown function DUF1330 PFAM: protein of unknown function DUF1330~KEGG: dac:Daci_5107 hypothetical protein gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1092 Alide_1093 Alide_1093 Alide_1093 1160912 1161769 - 2-dehydro-3-deoxyphosphooctonate aldolase KEGG: dac:Daci_5106 2-dehydro-3-deoxyphosphooctonate aldolase~TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase~PFAM: DAHP synthetase I/KDSA gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1093 Alide_1094 Alide_1094 Alide_1094 1161775 1163424 - CTP synthase TIGRFAM: CTP synthase~KEGG: dia:Dtpsy_0915 CTP synthetase~PFAM: CTP synthase-like%3B glutamine amidotransferase class-I gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1094 Alide_1095 Alide_1095 Alide_1095 1163500 1164726 + phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase~KEGG: dia:Dtpsy_0916 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase~PFAM: flavoprotein%3B DNA/pantothenate metabolism flavoprotein domain protein gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1095 Alide_1096 Alide_1096 Alide_1096 1164723 1165124 + hypothetical protein KEGG: vap:Vapar_3441 hypothetical protein gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1096 Alide_1097 Alide_1097 Alide_1097 1165193 1165639 + deoxyuridine 5'-triphosphate nucleotidohydrolase Dut TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut~KEGG: dia:Dtpsy_0917 deoxyuridine 5'-triphosphate nucleotidohydrolase~PFAM: deoxyUTP pyrophosphatase gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1097 Alide_1098 Alide_1098 Alide_1098 1165646 1166170 - fkbp-type peptidyl-prolyl cis-trans isomerase KEGG: dia:Dtpsy_0919 fkbp-type peptidyl-prolyl cis-trans isomerase gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1098 Alide_1099 Alide_1099 Alide_1099 1166224 1167348 + transcription factor jumonji jmjC domain-containing protein SMART: transcription factor jumonji jmjC domain-containing protein~KEGG: dia:Dtpsy_0920 cupin 4 family protein gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1099 Alide_1100 Alide_1100 Alide_1100 1167365 1167862 + hypothetical protein KEGG: dia:Dtpsy_0921 hypothetical protein gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1100 Alide_1101 Alide_1101 Alide_1101 1168428 1169516 - NlpB/DapX family lipoprotein KEGG: ajs:Ajs_1009 NlpB/DapX family lipoprotein gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1101 Alide_1102 Alide_1102 Alide_1102 1169551 1170447 - dihydrodipicolinate synthase KEGG: dia:Dtpsy_0924 dihydrodipicolinate synthase~TIGRFAM: dihydrodipicolinate synthase~PFAM: dihydrodipicolinate synthetase gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1102 Alide_1103 Alide_1103 Alide_1103 1170456 1170986 - Methyltransferase type 11 PFAM: Methyltransferase type 11~KEGG: dia:Dtpsy_0925 methyltransferase type 12 gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1103 Alide_1104 Alide_1104 Alide_1104 1170986 1171114 - hypothetical protein KEGG: ajs:Ajs_1012 hypothetical protein gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1104 Alide_1105 Alide_1105 Alide_1105 1171119 1172336 - major facilitator superfamily MFS_1 KEGG: dia:Dtpsy_0927 major facilitator superfamily MFS_1~manually curated~PFAM: major facilitator superfamily MFS_1 gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1105 Alide_1106 Alide_1106 Alide_1106 1172432 1174408 + DNA topoisomerase (ATP-hydrolyzing) PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein%3B ATP-binding region ATPase domain protein%3B DNA gyrase subunit B domain protein~KEGG: dia:Dtpsy_0928 DNA topoisomerase IV subunit B~SMART: DNA topoisomerase II%3B ATP-binding region ATPase domain protein gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1106 Alide_1107 Alide_1107 Alide_1107 1174464 1176806 + DNA topoisomerase IV%2C A subunit SMART: DNA gyrase/topoisomerase IV subunit A~TIGRFAM: DNA topoisomerase IV%2C A subunit~KEGG: ajs:Ajs_1016 DNA topoisomerase IV subunit A~PFAM: DNA gyrase/topoisomerase IV subunit A%3B DNA gyrase repeat beta-propeller gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1107 Alide_1108 Alide_1108 Alide_1108 1176914 1177372 - Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP~KEGG: ajs:Ajs_1018 endoribonuclease L-PSP gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1108 Alide_1109 Alide_1109 Alide_1109 1177478 1179877 + DNA internalization-related competence protein ComEC/Rec2 KEGG: dia:Dtpsy_0933 DNA internalization-related competence protein ComEC/Rec2~TIGRFAM: DNA internalization-related competence protein ComEC/Rec2%3B ComEC/Rec2-related protein~PFAM: ComEC/Rec2-related protein gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1109 Alide_1110 Alide_1110 Alide_1110 1180115 1181551 + Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: dia:Dtpsy_0944 aldehyde dehydrogenase gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1110 Alide_1111 Alide_1111 Alide_1111 1181757 1182656 - Rhodanese domain protein KEGG: ajs:Ajs_1033 3-mercaptopyruvate sulfurtransferase~PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1111 Alide_1112 Alide_1112 Alide_1112 1182710 1183621 - putative transmembrane protein KEGG: dia:Dtpsy_0952 putative transmembrane protein gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1112 Alide_1113 Alide_1113 Alide_1113 1183715 1184854 - Rieske (2Fe-2S) iron-sulfur domain protein PFAM: Rieske [2Fe-2S] iron-sulphur domain~KEGG: ajs:Ajs_1035 Rieske (2Fe-2S) domain-containing protein gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1113 Alide_1114 Alide_1114 Alide_1114 1185130 1185372 + exodeoxyribonuclease VII%2C small subunit KEGG: ajs:Ajs_1036 exodeoxyribonuclease VII%2C small subunit~TIGRFAM: exodeoxyribonuclease VII%2C small subunit~PFAM: Exonuclease VII small subunit gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1114 Alide_1115 Alide_1115 Alide_1115 1185372 1186265 + Polyprenyl synthetase PFAM: Polyprenyl synthetase~KEGG: dia:Dtpsy_0955 polyprenyl synthetase gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1115 Alide_1116 Alide_1116 Alide_1116 1186340 1188232 + deoxyxylulose-5-phosphate synthase KEGG: dia:Dtpsy_0956 1-deoxy-D-xylulose-5-phosphate synthase~TIGRFAM: deoxyxylulose-5-phosphate synthase~PFAM: Transketolase central region%3B dehydrogenase E1 component%3B Transketolase domain-containing protein gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1116 Alide_1117 Alide_1117 Alide_1117 1188360 1189442 + Extracellular solute-binding protein%2C family 7 PFAM: Extracellular solute-binding protein%2C family 7~KEGG: ctt:CtCNB1_3520 twin-arginine translocation pathway signal gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1117 Alide_1118 Alide_1118 Alide_1118 1189522 1194219 - DEAD/H associated domain protein KEGG: gdi:GDI_2676 DEAD/H associated%3B region: DEAD_assoc%3B pfam08494~PFAM: DEAD/H associated domain protein%3B DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1118 Alide_1119 Alide_1119 Alide_1119 1194354 1196180 - TRAP dicarboxylate transporter%2C DctM subunit KEGG: dia:Dtpsy_0958 TRAP dicarboxylate transporter%2C DctM subunit~TIGRFAM: TRAP dicarboxylate transporter%2C DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1119 Alide_1120 Alide_1120 Alide_1120 1196199 1196813 - Tripartite ATP-independent periplasmic transporter DctQ component PFAM: Tripartite ATP-independent periplasmic transporter DctQ component~KEGG: ctt:CtCNB1_3517 tripartite ATP-independent periplasmic protein gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1120 Alide_1121 Alide_1121 Alide_1121 1197155 1198108 - inositol monophosphatase PFAM: inositol monophosphatase~KEGG: dia:Dtpsy_0963 inositol-phosphate phosphatase gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1121 Alide_1122 Alide_1122 Alide_1122 1198238 1199050 + RNA methyltransferase%2C TrmH family%2C group 1 KEGG: ajs:Ajs_1046 RNA methyltransferase~TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 1~PFAM: tRNA/rRNA methyltransferase (SpoU) gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1122 Alide_1123 Alide_1123 Alide_1123 1199088 1199879 + serine O-acetyltransferase TIGRFAM: serine O-acetyltransferase~KEGG: ajs:Ajs_1047 serine O-acetyltransferase gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1123 Alide_1124 Alide_1124 Alide_1124 1199939 1200601 + nitroreductase PFAM: nitroreductase~KEGG: dia:Dtpsy_0966 nitroreductase gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1124 Alide_1125 Alide_1125 Alide_1125 1200605 1201702 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: dia:Dtpsy_0967 alcohol dehydrogenase zinc-binding domain protein gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1125 Alide_1126 Alide_1126 Alide_1126 1201795 1202391 - molybdenum cofactor synthesis domain protein KEGG: ajs:Ajs_1051 molybdopterin adenylyltransferase~TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: molybdopterin binding domain gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1126 Alide_1127 Alide_1127 Alide_1127 1202388 1203056 - protein of unknown function DUF615 PFAM: protein of unknown function DUF615~KEGG: dia:Dtpsy_0970 protein of unknown function DUF615 gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1127 Alide_1128 Alide_1128 Alide_1128 1203139 1204560 + peptidase U62 modulator of DNA gyrase PFAM: peptidase U62 modulator of DNA gyrase~KEGG: dia:Dtpsy_0971 peptidase U62 modulator of DNA gyrase gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1128 Alide_1129 Alide_1129 Alide_1129 1204570 1204791 - pseudogene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1129 Alide_1130 Alide_1130 Alide_1130 1205591 1206127 + hypothetical protein KEGG: srm:SRM_02731 two-component sensor histidine kinase gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1130 Alide_1131 Alide_1131 Alide_1131 1206118 1206453 + hypothetical protein KEGG: xca:xccb100_2303 putative siroheme synthase gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1131 Alide_1132 Alide_1132 Alide_1132 1206428 1209505 - Hemolysin-type calcium-binding region protein PFAM: Hemolysin-type calcium-binding region~KEGG: cvi:CV_0516 calcium binding hemolysin gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1132 Alide_1133 Alide_1133 Alide_1133 1209520 1210224 - hypothetical protein KEGG: reu:Reut_C5923 hypothetical protein gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1133 Alide_1134 Alide_1134 Alide_1134 1210224 1210535 - hypothetical protein KEGG: mpt:Mpe_B0404 hypothetical protein gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1134 Alide_1135 Alide_1135 Alide_1135 1210686 1211267 - LexA repressor TIGRFAM: LexA repressor~KEGG: bpy:Bphyt_3718 LexA repressor~PFAM: Peptidase S24/S26A/S26B%2C conserved region gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1135 Alide_1136 Alide_1136 Alide_1136 1212050 1212373 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1136 Alide_1137 Alide_1137 Alide_1137 1212370 1213285 + pseudogene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1137 Alide_1138 Alide_1138 Alide_1138 1213322 1215220 + pseudogene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1138 Alide_1139 Alide_1139 Alide_1139 1215217 1216530 + hypothetical protein KEGG: dac:Daci_5142 hypothetical protein gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1139 Alide_1140 Alide_1140 Alide_1140 1216539 1218743 + DEAD/DEAH box helicase domain protein KEGG: dac:Daci_5141 DEAD/DEAH box helicase domain-containing protein~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1140 Alide_1141 Alide_1141 Alide_1141 1218907 1220466 - hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C alpha subunit KEGG: dac:Daci_2654 tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit~TIGRFAM: hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C alpha subunit%3B hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta subunit~PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region%3B Fe-S type hydro-lyase tartrate/fumarate alpha region gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1141 Alide_1142 Alide_1142 Alide_1142 1220635 1222020 + fumarate hydratase%2C class II KEGG: aav:Aave_1491 fumarate hydratase~TIGRFAM: fumarate hydratase%2C class II~PFAM: fumarate lyase%3B Fumarase C-like gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1142 Alide_1143 Alide_1143 Alide_1143 1222021 1222803 - cyclic nucleotide-binding protein KEGG: dia:Dtpsy_0976 transcriptional regulator%2C Crp/Fnr family~PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding%3B regulatory protein Crp gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1143 Alide_1144 Alide_1144 Alide_1144 1222990 1224000 - Substrate-binding region of ABC-type glycine betaine transport system PFAM: Substrate-binding region of ABC-type glycine betaine transport system~KEGG: dia:Dtpsy_0979 glycine betaine transporter periplasmic subunit gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1144 Alide_1145 Alide_1145 Alide_1145 1224076 1225188 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_0980 binding-protein-dependent transport systems inner membrane component gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1145 Alide_1146 Alide_1146 Alide_1146 1225185 1226489 - glycine betaine/L-proline ABC transporter%2C ATPase subunit TIGRFAM: glycine betaine/L-proline ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B CBS domain containing protein~KEGG: ajs:Ajs_1065 glycine betaine/L-proline ABC transporter%2C ATPase subunit~SMART: AAA ATPase gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1146 Alide_1147 Alide_1147 Alide_1147 1227143 1229140 + acetate/CoA ligase KEGG: aav:Aave_1499 acetyl-coenzyme A synthetase~TIGRFAM: acetate/CoA ligase~PFAM: AMP-dependent synthetase and ligase gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1147 Alide_1148 Alide_1148 Alide_1148 1229255 1230301 - von Willebrand factor type A KEGG: aav:Aave_1061 von Willebrand factor%2C type A~PFAM: von Willebrand factor type A~SMART: von Willebrand factor type A gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1148 Alide_1149 Alide_1149 Alide_1149 1230334 1231302 - protein of unknown function DUF58 PFAM: protein of unknown function DUF58~KEGG: aav:Aave_1062 hypothetical protein gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1149 Alide_1150 Alide_1150 Alide_1150 1231295 1232326 - ATPase associated with various cellular activities AAA_3 PFAM: ATPase associated with various cellular activities AAA_3~KEGG: aav:Aave_1063 ATPase gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1150 Alide_1151 Alide_1151 Alide_1151 1232341 1233240 - peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap~KEGG: aav:Aave_1064 peptidase S1 and S6%2C chymotrypsin/Hap gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1151 Alide_1152 Alide_1152 Alide_1152 1233345 1233707 - alkylhydroperoxidase like protein%2C AhpD family KEGG: dia:Dtpsy_2753 alkylhydroperoxidase like protein%2C AhpD family~TIGRFAM: alkylhydroperoxidase like protein%2C AhpD family~PFAM: Carboxymuconolactone decarboxylase gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1152 Alide_1153 Alide_1153 Alide_1153 1233852 1234160 + regulatory protein ArsR KEGG: dia:Dtpsy_2752 transcriptional regulator%2C TrmB~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1153 Alide_1154 Alide_1154 Alide_1154 1234190 1234387 + hypothetical protein KEGG: dia:Dtpsy_2751 hypothetical protein gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1154 Alide_1155 Alide_1155 Alide_1155 1234398 1235243 + TatD-related deoxyribonuclease PFAM: TatD-related deoxyribonuclease~KEGG: ajs:Ajs_3416 TatD-related deoxyribonuclease gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1155 Alide_1156 Alide_1156 Alide_1156 1235318 1235842 + hypothetical protein KEGG: dia:Dtpsy_2749 hypothetical protein gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1156 Alide_1157 Alide_1157 Alide_1157 1235839 1236600 + hypothetical protein KEGG: dia:Dtpsy_2748 hypothetical protein gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1157 Alide_1158 Alide_1158 Alide_1158 1236605 1238371 + type II secretion system protein E KEGG: dia:Dtpsy_2747 type II secretion system protein E~PFAM: type II secretion system protein E%3B General secretory system II protein E domain protein~SMART: AAA ATPase gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1158 Alide_1159 Alide_1159 Alide_1159 1238502 1238990 + hypothetical protein KEGG: dia:Dtpsy_2746 protein of unknown function DUF1468 gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1159 Alide_1160 Alide_1160 Alide_1160 1239007 1240518 + protein of unknown function DUF112 transmembrane PFAM: protein of unknown function DUF112 transmembrane~KEGG: ajs:Ajs_3411 hypothetical protein gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1160 Alide_1161 Alide_1161 Alide_1161 1240720 1241550 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_2744 short-chain dehydrogenase/reductase SDR gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1161 Alide_1162 Alide_1162 Alide_1162 1241550 1242617 + Extracellular solute-binding protein%2C family 7 PFAM: Extracellular solute-binding protein%2C family 7~KEGG: ajs:Ajs_3408 TRAP dicarboxylate transporter-DctP subunit gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1162 Alide_1163 Alide_1163 Alide_1163 1242614 1245277 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein~KEGG: dia:Dtpsy_2742 diguanylate cyclase/phosphodiesterase~SMART: EAL domain protein%3B GGDEF domain containing protein gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1163 Alide_1164 Alide_1164 Alide_1164 1245300 1246202 - protein of unknown function DUF6 transmembrane KEGG: ajs:Ajs_3406 hypothetical protein~manually curated~PFAM: protein of unknown function DUF6 transmembrane gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1164 Alide_1165 Alide_1165 Alide_1165 1246308 1247294 + Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: dia:Dtpsy_2740 alcohol dehydrogenase zinc-binding domain protein gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1165 Alide_1166 Alide_1166 Alide_1166 1247291 1248109 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: ajs:Ajs_3404 NUDIX hydrolase gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1166 Alide_1167 Alide_1167 Alide_1167 1248063 1249004 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dac:Daci_3178 LysR family transcriptional regulator gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1167 Alide_1168 Alide_1168 Alide_1168 1249119 1250084 + Bile acid:sodium symporter KEGG: dia:Dtpsy_2738 hypothetical protein~manually curated~PFAM: Bile acid:sodium symporter gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1168 Alide_1169 Alide_1169 Alide_1169 1250094 1251761 - Na/Pi-cotransporter II-related protein KEGG: aav:Aave_3461 Na/Pi-cotransporter II-related protein~TIGRFAM: Na/Pi-cotransporter II-related protein~PFAM: Na+/Picotransporter%3B PhoU family protein gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1169 Alide_1170 Alide_1170 Alide_1170 1251784 1252623 - metallophosphoesterase PFAM: metallophosphoesterase~KEGG: vap:Vapar_1261 metallophosphoesterase gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1170 Alide_1171 Alide_1171 Alide_1171 1252620 1253681 - ABC transporter related protein KEGG: vap:Vapar_1262 ABC transporter related~PFAM: ABC transporter related%3B Transport-associated OB domain-containing protein~SMART: AAA ATPase gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1171 Alide_1172 Alide_1172 Alide_1172 1253671 1254471 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: vap:Vapar_1263 binding-protein-dependent transport systems inner membrane component gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1172 Alide_1173 Alide_1173 Alide_1173 1254497 1255306 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: vap:Vapar_1264 binding-protein-dependent transport systems inner membrane component gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1173 Alide_1174 Alide_1174 Alide_1174 1255303 1256316 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: vap:Vapar_1265 extracellular solute-binding protein family 1 gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1174 Alide_1175 Alide_1175 Alide_1175 1256356 1257378 - periplasmic binding protein/LacI transcriptional regulator KEGG: vap:Vapar_1266 transcriptional regulator%2C LacI family~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1175 Alide_1176 Alide_1176 Alide_1176 1257471 1257968 - lipoprotein signal peptidase TIGRFAM: lipoprotein signal peptidase~KEGG: dia:Dtpsy_2736 lipoprotein signal peptidase~PFAM: peptidase A8 signal peptidase II gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1176 Alide_1177 Alide_1177 Alide_1177 1257968 1260823 - isoleucyl-tRNA synthetase KEGG: dia:Dtpsy_2735 isoleucyl-tRNA synthetase~TIGRFAM: isoleucyl-tRNA synthetase gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1177 Alide_1178 Alide_1178 Alide_1178 1260914 1261960 - riboflavin biosynthesis protein RibF KEGG: ajs:Ajs_3398 bifunctional riboflavin kinase/FMN adenylyltransferase~TIGRFAM: riboflavin biosynthesis protein RibF~PFAM: FAD synthetase%3B Riboflavin kinase gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1178 Alide_1179 Alide_1179 Alide_1179 1262114 1262671 + HNH endonuclease KEGG: dia:Dtpsy_2733 HNH endonuclease~PFAM: HNH endonuclease~SMART: HNH nuclease gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1179 Alide_1180 Alide_1180 Alide_1180 1262726 1263841 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: dia:Dtpsy_2732 acyl-CoA dehydrogenase domain protein gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1180 Alide_1181 Alide_1181 Alide_1181 1263856 1265037 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: dia:Dtpsy_2731 acyl-CoA dehydrogenase domain protein gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1181 Alide_1182 Alide_1182 Alide_1182 1265083 1265772 - protein of unknown function DUF480 PFAM: protein of unknown function DUF480~KEGG: ctt:CtCNB1_0874 hypothetical protein gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1182 Alide_1183 Alide_1183 Alide_1183 1265793 1266374 + phosphoribosylglycinamide formyltransferase KEGG: dac:Daci_5372 phosphoribosylglycinamide formyltransferase~TIGRFAM: phosphoribosylglycinamide formyltransferase~PFAM: formyl transferase domain protein gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1183 Alide_1184 Alide_1184 Alide_1184 1266490 1267809 + Fmu (Sun) domain protein PFAM: Fmu (Sun) domain protein~KEGG: aav:Aave_3433 Fmu (Sun) domain-containing protein gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1184 Alide_1185 Alide_1185 Alide_1185 1267921 1268091 - ribosomal protein L33 KEGG: dia:Dtpsy_2723 50S ribosomal protein L33~TIGRFAM: ribosomal protein L33~PFAM: ribosomal protein L33 gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1185 Alide_1186 Alide_1186 Alide_1186 1268112 1268345 - ribosomal protein L28 KEGG: ctt:CtCNB1_0883 ribosomal protein L28~TIGRFAM: ribosomal protein L28~PFAM: ribosomal protein L28 gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1186 Alide_1187 Alide_1187 Alide_1187 1268497 1269447 - thioredoxin reductase manually curated~TIGRFAM: thioredoxin reductase~KEGG: dia:Dtpsy_2721 thioredoxin reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1187 Alide_1188 Alide_1188 Alide_1188 1269592 1271928 + cell division protein FtsK/SpoIIIE PFAM: cell divisionFtsK/SpoIIIE%3B DNA translocase ftsK gamma~KEGG: ajs:Ajs_3382 DNA translocase FtsK gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1188 Alide_1189 Alide_1189 Alide_1189 1271940 1272572 + outer membrane lipoprotein carrier protein LolA KEGG: ajs:Ajs_3381 outer membrane lipoprotein carrier protein LolA~TIGRFAM: outer membrane lipoprotein carrier protein LolA~PFAM: outer membrane lipoprotein carrier protein LolA gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1189 Alide_1190 Alide_1190 Alide_1190 1272576 1273532 - UbiA prenyltransferase PFAM: UbiA prenyltransferase~KEGG: eba:ebA3963 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1190 Alide_1191 Alide_1191 Alide_1191 1273555 1274157 - uracil-DNA glycosylase superfamily KEGG: dia:Dtpsy_2718 uracil-DNA glycosylase superfamily gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1191 Alide_1192 Alide_1192 Alide_1192 1274198 1275511 + AAA ATPase central domain protein KEGG: ajs:Ajs_3365 recombination factor protein RarA~PFAM: AAA ATPase central domain protein~SMART: AAA ATPase gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1192 Alide_1193 Alide_1193 Alide_1193 1275710 1276639 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dia:Dtpsy_2712 inner-membrane translocator gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1193 Alide_1194 Alide_1194 Alide_1194 1276656 1277732 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dia:Dtpsy_2711 inner-membrane translocator gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1194 Alide_1195 Alide_1195 Alide_1195 1277754 1278536 + ABC transporter related protein KEGG: dia:Dtpsy_2710 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1195 Alide_1196 Alide_1196 Alide_1196 1278540 1279268 + ABC transporter related protein KEGG: ajs:Ajs_3361 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1196 Alide_1197 Alide_1197 Alide_1197 1279316 1279726 + protein of unknown function DUF486 PFAM: protein of unknown function DUF486~KEGG: dia:Dtpsy_2708 protein of unknown function DUF486 gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1197 Alide_1198 Alide_1198 Alide_1198 1279765 1280361 - OmpA domain-containing protein KEGG: aav:Aave_1879 OmpA domain-containing protein gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1198 Alide_1199 Alide_1199 Alide_1199 1280601 1281248 + putative phosphate transport regulator PFAM: Putitive phosphate transport regulator~KEGG: dia:Dtpsy_2707 protein of unknown function DUF47 gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1199 Alide_1200 Alide_1200 Alide_1200 1281269 1282279 + phosphate transporter PFAM: phosphate transporter~KEGG: dia:Dtpsy_2706 phosphate transporter gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1200 Alide_1201 Alide_1201 Alide_1201 1282333 1282779 - hypothetical protein KEGG: dia:Dtpsy_2705 hypothetical protein gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1201 Alide_1202 Alide_1202 Alide_1202 1282802 1283329 - Phosphinothricin acetyltransferase KEGG: dia:Dtpsy_2704 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1202 Alide_1203 Alide_1203 Alide_1203 1283446 1283700 + ribosomal protein S16 KEGG: dia:Dtpsy_2703 30S ribosomal protein S16~TIGRFAM: ribosomal protein S16~PFAM: ribosomal protein S16 gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1203 Alide_1204 Alide_1204 Alide_1204 1283794 1284366 + 16S rRNA processing protein RimM KEGG: dia:Dtpsy_2702 16S rRNA-processing protein RimM~TIGRFAM: 16S rRNA processing protein RimM~PFAM: RimM protein%3B PRC-barrel domain protein gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1204 Alide_1205 Alide_1205 Alide_1205 1284374 1285141 + tRNA (guanine-N1)-methyltransferase TIGRFAM: tRNA (guanine-N1)-methyltransferase~KEGG: ajs:Ajs_3353 tRNA (guanine-N(1)-)-methyltransferase~PFAM: tRNA (guanine-N1-)-methyltransferase gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1205 Alide_1206 Alide_1206 Alide_1206 1285261 1285647 + ribosomal protein L19 KEGG: dac:Daci_5342 ribosomal protein L19~TIGRFAM: ribosomal protein L19~PFAM: ribosomal protein L19 gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1206 Alide_1207 Alide_1207 Alide_1207 1285758 1286441 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: ajs:Ajs_3351 NUDIX hydrolase gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1207 Alide_1208 Alide_1208 Alide_1208 1286488 1287477 + cobalamin biosynthesis protein CbiB PFAM: cobalamin biosynthesis protein CbiB~KEGG: dia:Dtpsy_2698 cobalamin biosynthesis protein CbiB gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1208 Alide_1209 Alide_1209 Alide_1209 1287553 1288635 + histidinol-phosphate aminotransferase KEGG: vap:Vapar_1479 histidinol-phosphate aminotransferase~TIGRFAM: histidinol-phosphate aminotransferase~PFAM: aminotransferase class I and II gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1209 Alide_1210 Alide_1210 Alide_1210 1288642 1290300 - sulphate transporter PFAM: sulphate transporter%3B Sulfate transporter/antisigma-factor antagonist STAS~KEGG: pne:Pnec_1354 sulphate transporter gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1210 Alide_1211 Alide_1211 Alide_1211 1290315 1291286 - ribosome small subunit-dependent GTPase A KEGG: dia:Dtpsy_2697 ribosome small subunit-dependent GTPase A~TIGRFAM: ribosome small subunit-dependent GTPase A~PFAM: GTPase EngC gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1211 Alide_1212 Alide_1212 Alide_1212 1291296 1291634 - transcriptional coactivator/pterin dehydratase KEGG: dia:Dtpsy_2696 transcriptional coactivator/pterin dehydratase~manually curated~PFAM: transcriptional coactivator/pterin dehydratase gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1212 Alide_1213 Alide_1213 Alide_1213 1291631 1292923 - Ste24 endopeptidase KEGG: dia:Dtpsy_2695 STE24 endopeptidase~PFAM: peptidase M48 Ste24p gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1213 Alide_1214 Alide_1214 Alide_1214 1292943 1293554 + Exonuclease RNase T and DNA polymerase III KEGG: dia:Dtpsy_2694 oligoribonuclease~PFAM: Exonuclease RNase T and DNA polymerase III~SMART: Exonuclease gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1214 Alide_1215 Alide_1215 Alide_1215 1293678 1294811 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: vap:Vapar_5221 extracellular ligand-binding receptor gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1215 Alide_1216 Alide_1216 Alide_1216 1295078 1296832 + DEAD/DEAH box helicase domain protein KEGG: dia:Dtpsy_2693 DEAD/DEAH box helicase domain protein~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1216 Alide_1217 Alide_1217 Alide_1217 1296953 1298416 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~KEGG: aav:Aave_1895 diguanylate cyclase~SMART: GGDEF domain containing protein gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1217 Alide_1218 Alide_1218 Alide_1218 1298424 1299656 - drug resistance transporter%2C Bcr/CflA subfamily KEGG: ajs:Ajs_3344 Bcr/CflA subfamily drug resistance transporter~TIGRFAM: drug resistance transporter%2C Bcr/CflA subfamily~PFAM: major facilitator superfamily MFS_1 gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1218 Alide_1219 Alide_1219 Alide_1219 1299844 1300329 - protein of unknown function DUF461 PFAM: protein of unknown function DUF461~KEGG: dia:Dtpsy_2691 protein of unknown function DUF461 gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1219 Alide_1220 Alide_1220 Alide_1220 1300409 1300780 - hypothetical protein KEGG: ajs:Ajs_3342 hypothetical protein gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1220 Alide_1221 Alide_1221 Alide_1221 1300802 1301533 - cyclic nucleotide-binding protein KEGG: dia:Dtpsy_2689 transcriptional regulator%2C Crp/Fnr family~PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding%3B regulatory protein Crp gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1221 Alide_1222 Alide_1222 Alide_1222 1301609 1303762 + TonB-dependent receptor PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: dia:Dtpsy_2688 TonB-dependent receptor gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1222 Alide_1223 Alide_1223 Alide_1223 1303764 1304780 + putative periplasmic component of ABC-type transport system KEGG: dia:Dtpsy_2687 putative periplasmic component of ABC-type transport system gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1223 Alide_1224 Alide_1224 Alide_1224 1304777 1305583 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_2682 binding-protein-dependent transport systems inner membrane component gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1224 Alide_1225 Alide_1225 Alide_1225 1305603 1306463 + ABC transporter related protein KEGG: dia:Dtpsy_2681 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1225 Alide_1226 Alide_1226 Alide_1226 1306585 1307754 + NnrS family protein PFAM: NnrS family protein~KEGG: dia:Dtpsy_2680 NnrS family protein gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1226 Alide_1227 Alide_1227 Alide_1227 1308074 1310029 + TonB-dependent receptor plug PFAM: TonB-dependent receptor plug%3B TonB-dependent receptor~KEGG: dia:Dtpsy_2686 TonB-dependent receptor plug gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1227 Alide_1228 Alide_1228 Alide_1228 1310081 1314148 + Cobaltochelatase KEGG: dia:Dtpsy_2685 cobaltochelatase~PFAM: CobN/magnesium chelatase gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1228 Alide_1229 Alide_1229 Alide_1229 1315038 1315634 + hypothetical protein KEGG: tdn:Suden_1229 hypothetical protein gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1229 Alide_1230 Alide_1230 Alide_1230 1315697 1316233 + hypothetical protein KEGG: dia:Dtpsy_2684 hypothetical protein gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1230 Alide_1231 Alide_1231 Alide_1231 1316230 1316553 + Protein of unknown function DUF2149 PFAM: Protein of unknown function DUF2149~KEGG: dia:Dtpsy_2683 hypothetical protein gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1231 Alide_1232 Alide_1232 Alide_1232 1316917 1317996 - hypothetical protein KEGG: sgl:SG1173 phage integrase gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1232 Alide_1233 Alide_1233 Alide_1233 1317980 1318255 - hypothetical protein KEGG: aav:Aave_1735 hypothetical protein gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1233 Alide_1234 Alide_1234 Alide_1234 1318258 1318716 - hypothetical protein KEGG: pna:Pnap_2277 hypothetical protein gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1234 Alide_1235 Alide_1235 Alide_1235 1318713 1318997 - hypothetical protein KEGG: see:SNSL254_p_0061 hypothetical protein gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1235 Alide_1236 Alide_1236 Alide_1236 1319004 1320149 - C-5 cytosine-specific DNA methylase PFAM: C-5 cytosine-specific DNA methylase~KEGG: mlo:mlr7992 DNA modification methylase gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1236 Alide_1237 Alide_1237 Alide_1237 1320190 1320402 - hypothetical protein KEGG: rsh:Rsph17029_0652 hypothetical protein gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1237 Alide_1238 Alide_1238 Alide_1238 1320399 1321055 - hypothetical protein KEGG: amd:AMED_0550 exopolysaccharide biosynthesis protein gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1238 Alide_1239 Alide_1239 Alide_1239 1321052 1321270 - hypothetical protein KEGG: dac:Daci_2614 hypothetical protein gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1239 Alide_1240 Alide_1240 Alide_1240 1321295 1321513 - hypothetical protein KEGG: ang:An16g04440 hypothetical protein gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1240 Alide_1241 Alide_1241 Alide_1241 1321519 1321791 - hypothetical protein KEGG: pol:Bpro_2970 hypothetical protein gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1241 Alide_1242 Alide_1242 Alide_1242 1321785 1323761 - replication protein A PFAM: replication gene A~KEGG: dac:Daci_2615 replication gene A gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1242 Alide_1243 Alide_1243 Alide_1243 1323765 1324058 - hypothetical protein KEGG: dac:Daci_2616 hypothetical protein gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1243 Alide_1244 Alide_1244 Alide_1244 1324213 1324371 - hypothetical protein KEGG: amd:AMED_8985 hypothetical protein gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1244 Alide_1245 Alide_1245 Alide_1245 1324362 1324787 - hypothetical protein KEGG: rso:RSc1667 hypothetical protein gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1245 Alide_1246 Alide_1246 Alide_1246 1324906 1325319 - transcriptional activator Ogr/delta PFAM: transcriptional activator Ogr/delta~KEGG: dac:Daci_2617 transcriptional activator Ogr/delta gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1246 Alide_1247 Alide_1247 Alide_1247 1325359 1325628 - hypothetical protein KEGG: pct:PC1_2629 hypothetical protein gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1247 Alide_1248 Alide_1248 Alide_1248 1325631 1325846 - hypothetical protein KEGG: aau:AAur_4085 transcriptional regulator gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1248 Alide_1249 Alide_1249 Alide_1249 1325865 1326086 - hypothetical protein KEGG: kse:Ksed_24630 capsular exopolysaccharide biosynthesis protein gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1249 Alide_1250 Alide_1250 Alide_1250 1326189 1326905 + Peptidase S24/S26A/S26B%2C conserved region protein KEGG: aav:Aave_3589 putative phage repressor~manually curated~PFAM: Peptidase S24/S26A/S26B%2C conserved region gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1250 Alide_1251 Alide_1251 Alide_1251 1327010 1327720 + hypothetical protein KEGG: eic:NT01EI_3144 hypothetical protein gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1251 Alide_1252 Alide_1252 Alide_1252 1328007 1328576 - hypothetical protein KEGG: aav:Aave_1749 hypothetical protein gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1252 Alide_1253 Alide_1253 Alide_1253 1328652 1329101 - Protein of unknown function DUF2442 PFAM: Protein of unknown function DUF2442~KEGG: avn:Avin_37320 hypothetical protein gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1253 Alide_1254 Alide_1254 Alide_1254 1329098 1329328 - hypothetical protein KEGG: eba:ebA5912 hypothetical protein gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1254 Alide_1255 Alide_1255 Alide_1255 1329380 1330393 - late control D family protein KEGG: dac:Daci_2620 late control D family protein gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1255 Alide_1256 Alide_1256 Alide_1256 1330393 1330836 - P2 GpU family protein PFAM: P2 GpU family protein~KEGG: dac:Daci_2621 P2 GpU family protein gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1256 Alide_1257 Alide_1257 Alide_1257 1330845 1333355 - phage tail tape measure protein%2C TP901 family KEGG: pna:Pnap_3313 TP901 family phage tail tape measure protein~TIGRFAM: phage tail tape measure protein%2C TP901 family~PFAM: tail tape measure protein TP901 core region gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1257 Alide_1258 Alide_1258 Alide_1258 1333392 1333619 - hypothetical protein KEGG: dsi:Dsim_GD23071 GD23071 gene product from transcript GD23071-RA gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1258 Alide_1259 Alide_1259 Alide_1259 1333662 1333778 - P2 GpE family protein PFAM: P2 GpE family protein~KEGG: dac:Daci_2623 P2 GpE family protein gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1259 Alide_1260 Alide_1260 Alide_1260 1333787 1334146 - tail E family protein PFAM: tail E family protein~KEGG: dac:Daci_2624 tail E family protein gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1260 Alide_1261 Alide_1261 Alide_1261 1334182 1334691 - phage major tail tube protein KEGG: dac:Daci_2625 phage major tail tube protein~TIGRFAM: phage major tail tube protein~PFAM: major tail tube protein gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1261 Alide_1262 Alide_1262 Alide_1262 1334717 1335913 - tail sheath protein KEGG: dac:Daci_2626 tail sheath protein gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1262 Alide_1263 Alide_1263 Alide_1263 1335929 1336171 - hypothetical protein KEGG: hsm:HSM_0915 hypothetical protein gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1263 Alide_1264 Alide_1264 Alide_1264 1336218 1336871 - hypothetical protein KEGG: mag:amb0391 hypothetical protein gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1264 Alide_1265 Alide_1265 Alide_1265 1336880 1337800 - hypothetical protein KEGG: spv:SPH_1885 cell wall surface anchor family protein gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1265 Alide_1266 Alide_1266 Alide_1266 1337801 1338439 - hypothetical protein KEGG: mca:MCA2902 hypothetical protein gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1266 Alide_1267 Alide_1267 Alide_1267 1338456 1340702 - hypothetical protein KEGG: mca:MCA2904 hypothetical protein gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1267 Alide_1268 Alide_1268 Alide_1268 1340708 1341919 - hypothetical protein KEGG: mca:MCA2905 prophage MuMc02 tail fiber domain-containing protein gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1268 Alide_1269 Alide_1269 Alide_1269 1341912 1342850 - Baseplate J family protein PFAM: Baseplate J family protein~KEGG: dac:Daci_2635 baseplate J family protein gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1269 Alide_1270 Alide_1270 Alide_1270 1342847 1343197 - GPW/gp25 family protein PFAM: GPW/gp25 family protein~KEGG: dac:Daci_2636 gpW/GP25 family protein gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1270 Alide_1271 Alide_1271 Alide_1271 1343194 1343790 - phage baseplate assembly protein V TIGRFAM: phage baseplate assembly protein V~KEGG: dac:Daci_2637 phage baseplate assembly protein V gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1271 Alide_1272 Alide_1272 Alide_1272 1343867 1344343 - phage virion morphogenesis protein TIGRFAM: phage virion morphogenesis protein~KEGG: csa:Csal_1389 phage virion morphogenesis (putative tail completion) protein gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1272 Alide_1273 Alide_1273 Alide_1273 1344318 1344464 - hypothetical protein KEGG: vvi:100251070 hypothetical protein LOC100251070 gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1273 Alide_1274 Alide_1274 Alide_1274 1344443 1344934 - P2 phage tail completion R family protein KEGG: dac:Daci_2638 P2 phage tail completion R family protein gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1274 Alide_1275 Alide_1275 Alide_1275 1344918 1345466 - Protein of unknown function DUF2514 PFAM: Protein of unknown function DUF2514~KEGG: dac:Daci_2639 hypothetical protein gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1275 Alide_1276 Alide_1276 Alide_1276 1345513 1345692 - hypothetical protein KEGG: rlt:Rleg2_1424 major facilitator superfamily MFS_1 gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1276 Alide_1277 Alide_1277 Alide_1277 1345689 1346216 - glycoside hydrolase family 24 PFAM: glycoside hydrolase family 24~KEGG: eba:ebA7232 phage-related lysozyme gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1277 Alide_1278 Alide_1278 Alide_1278 1346207 1346443 - hypothetical protein KEGG: dac:Daci_2641 hypothetical protein gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1278 Alide_1279 Alide_1279 Alide_1279 1346450 1346653 - tail X family protein PFAM: tail X family protein~KEGG: dac:Daci_2642 tail X family protein gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1279 Alide_1280 Alide_1280 Alide_1280 1346653 1347135 - head completion protein PFAM: head completion protein~KEGG: bps:BPSL0168 phage head completion/stabilization protein gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1280 Alide_1281 Alide_1281 Alide_1281 1347262 1347966 - small terminase subunit PFAM: small terminase subunit~KEGG: pna:Pnap_3292 phage small terminase subunit gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1281 Alide_1282 Alide_1282 Alide_1282 1348065 1349069 - phage major capsid protein%2C P2 family KEGG: csa:Csal_1397 phage major capsid protein%2C P2~TIGRFAM: phage major capsid protein%2C P2 family~PFAM: major capsid protein P2 gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1282 Alide_1283 Alide_1283 Alide_1283 1349129 1349959 - capsid scaffolding PFAM: capsid scaffolding~KEGG: pfs:PFLU1589 putative capsid scafolding protein gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1283 Alide_1284 Alide_1284 Alide_1284 1350104 1352005 + hypothetical protein KEGG: pna:Pnap_3289 hypothetical protein gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1284 Alide_1285 Alide_1285 Alide_1285 1352008 1353099 + phage portal protein%2C PBSX family KEGG: hse:Hsero_0910 bacteriophage capsid portal protein protein~TIGRFAM: phage portal protein%2C PBSX family~PFAM: portal protein gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1285 Alide_1286 Alide_1286 Alide_1286 1353726 1354703 - guanosine monophosphate reductase KEGG: aav:Aave_1911 guanosine 5'-monophosphate oxidoreductase~TIGRFAM: guanosine monophosphate reductase~PFAM: IMP dehydrogenase/GMP reductase gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1286 Alide_1287 Alide_1287 Alide_1287 1354937 1357327 + UvrD/REP helicase PFAM: UvrD/REP helicase~KEGG: dia:Dtpsy_2677 UvrD/REP helicase gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1287 Alide_1288 Alide_1288 Alide_1288 1357349 1359298 - protein of unknown function DUF839 PFAM: protein of unknown function DUF839~KEGG: aav:Aave_1926 putative exported alkaline phosphatase gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1288 Alide_1289 Alide_1289 Alide_1289 1359566 1361182 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein%3B extracellular solute-binding protein family 3~KEGG: dba:Dbac_1471 diguanylate cyclase~SMART: GGDEF domain containing protein%3B extracellular solute-binding protein family 3 gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1289 Alide_1290 Alide_1290 Alide_1290 1361195 1362016 - hypothetical protein KEGG: ajs:Ajs_3321 hypothetical protein gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1290 Alide_1291 Alide_1291 Alide_1291 1362063 1363013 - homoserine kinase TIGRFAM: homoserine kinase~KEGG: ajs:Ajs_3320 homoserine kinase~PFAM: aminoglycoside phosphotransferase gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1291 Alide_1292 Alide_1292 Alide_1292 1363091 1363456 - hypothetical protein KEGG: dia:Dtpsy_2671 hypothetical protein gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1292 Alide_1293 Alide_1293 Alide_1293 1363488 1363910 - hypothetical protein KEGG: ajs:Ajs_3318 hypothetical protein gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1293 Alide_1294 Alide_1294 Alide_1294 1363992 1366757 + DNA polymerase I SMART: DNA-directed DNA polymerase%3B 5'-3' exonuclease%3B Helix-hairpin-helix domain protein class 2%3B 3'-5' exonuclease~TIGRFAM: DNA polymerase I~KEGG: dia:Dtpsy_2669 DNA polymerase I~PFAM: DNA-directed DNA polymerase%3B 5'-3' exonuclease%2C N-terminal resolvase-like domain%3B 5'-3' exonuclease%2C SAM-fold domain%3B 3'-5' exonuclease gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1294 Alide_1295 Alide_1295 Alide_1295 1366774 1367703 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: cti:RALTA_B1464 putative transcriptional regulator%2C LysR family gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1295 Alide_1296 Alide_1296 Alide_1296 1367780 1368595 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: afv:AFLA_059270 short-chain dehydrogenases/reductase%2C putative gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1296 Alide_1297 Alide_1297 Alide_1297 1368791 1369759 + hypothetical protein KEGG: dac:Daci_0250 hypothetical protein gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1297 Alide_1298 Alide_1298 Alide_1298 1369779 1370303 + Carboxymuconolactone decarboxylase PFAM: Carboxymuconolactone decarboxylase~KEGG: bpt:Bpet3546 hypothetical protein gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1298 Alide_1299 Alide_1299 Alide_1299 1370311 1371306 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: bpt:Bpet4163 LysR family transcriptional regulator gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1299 Alide_1300 Alide_1300 Alide_1300 1371441 1372415 + putative secreted protein KEGG: bpt:Bpet4162 putative secreted protein gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1300 Alide_1301 Alide_1301 Alide_1301 1372443 1373636 + Formyl-CoA transferase KEGG: bpt:Bpet4161 acyl-CoA transferase/carnitine dehydratase~PFAM: L-carnitine dehydratase/bile acid-inducible protein F gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1301 Alide_1302 Alide_1302 Alide_1302 1373660 1374424 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: bpt:Bpet4160 putative enoyl-CoA hydratase gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1302 Alide_1303 Alide_1303 Alide_1303 1374510 1375394 + Carboxymethylenebutenolidase KEGG: dia:Dtpsy_2668 carboxymethylenebutenolidase gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1303 Alide_1304 Alide_1304 Alide_1304 1375505 1376323 + zinc/iron permease PFAM: zinc/iron permease~KEGG: dia:Dtpsy_2667 zinc/iron permease gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1304 Alide_1305 Alide_1305 Alide_1305 1376423 1377166 - response regulator receiver KEGG: ajs:Ajs_3314 LytR/AlgR family transcriptional regulator~PFAM: response regulator receiver%3B LytTr DNA-binding region~SMART: response regulator receiver gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1305 Alide_1306 Alide_1306 Alide_1306 1377223 1377942 - phosphoserine phosphatase SerB TIGRFAM: phosphoserine phosphatase SerB%3B HAD-superfamily hydrolase%2C subfamily IB (PSPase-like)~KEGG: dia:Dtpsy_2506 phosphoserine phosphatase SerB~PFAM: Haloacid dehalogenase domain protein hydrolase gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1306 Alide_1307 Alide_1307 Alide_1307 1378284 1380458 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 KEGG: ppw:PputW619_2172 HAD family hydrolase~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase%3B Mannitol dehydrogenase domain gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1307 Alide_1308 Alide_1308 Alide_1308 1380625 1381305 - hypothetical protein KEGG: dia:Dtpsy_2505 hypothetical protein gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1308 Alide_1309 Alide_1309 Alide_1309 1381312 1384803 - transcription-repair coupling factor TIGRFAM: transcription-repair coupling factor~PFAM: transcription factor CarD%3B DEAD/DEAH box helicase domain protein%3B helicase domain protein%3B TRCF domain protein~KEGG: ajs:Ajs_3157 transcription-repair coupling factor~SMART: DEAD-like helicase %3B helicase domain protein gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1309 Alide_1310 Alide_1310 Alide_1310 1384882 1385730 + 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KEGG: dia:Dtpsy_2503 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1310 Alide_1311 Alide_1311 Alide_1311 1385751 1386230 + 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase KEGG: dia:Dtpsy_2502 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase~TIGRFAM: 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase~PFAM: MECDP-synthase gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1311 Alide_1312 Alide_1312 Alide_1312 1386303 1387808 - ATP-binding region ATPase domain protein KEGG: dia:Dtpsy_2501 histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1312 Alide_1313 Alide_1313 Alide_1313 1387881 1388612 - response regulator receiver KEGG: dia:Dtpsy_2500 osmolarity response regulator~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1313 Alide_1314 Alide_1314 Alide_1314 1388809 1389537 + protein of unknown function DUF541 PFAM: protein of unknown function DUF541~KEGG: dia:Dtpsy_2499 protein of unknown function DUF541 gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1314 Alide_1315 Alide_1315 Alide_1315 1389592 1390374 - 3-hydroxybutyrate dehydrogenase KEGG: dia:Dtpsy_2498 3-hydroxybutyrate dehydrogenase~TIGRFAM: 3-hydroxybutyrate dehydrogenase~PFAM: short-chain dehydrogenase/reductase SDR gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1315 Alide_1316 Alide_1316 Alide_1316 1390523 1391386 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: ajs:Ajs_3150 alpha/beta hydrolase fold gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1316 Alide_1317 Alide_1317 Alide_1317 1391383 1393629 + RelA/SpoT family protein TIGRFAM: RelA/SpoT family protein~KEGG: ajs:Ajs_3149 (p)ppGpp synthetase I%2C SpoT/RelA~PFAM: RelA/SpoT domain protein%3B TGS domain-containing protein%3B amino acid-binding ACT domain protein gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1317 Alide_1318 Alide_1318 Alide_1318 1394168 1394383 + hypothetical protein KEGG: dia:Dtpsy_2387 hypothetical protein gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1318 Alide_1319 Alide_1319 Alide_1319 1394448 1394756 + RNP-1 like RNA-binding protein KEGG: dia:Dtpsy_2389 RNP-1 like RNA-binding protein~PFAM: RNP-1 like RNA-binding protein~SMART: RNP-1 like RNA-binding protein gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1319 Alide_1320 Alide_1320 Alide_1320 1394949 1395488 + polyhydroxyalkanoate synthesis repressor PhaR KEGG: dia:Dtpsy_2495 polyhydroxyalkonate synthesis repressor%2C PhaR~TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR~PFAM: PHA accumulation regulator DNA-binding protein%3B PHB accumulation regulatory domain protein gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1320 Alide_1321 Alide_1321 Alide_1321 1395526 1396917 + MiaB-like tRNA modifying enzyme YliG TIGRFAM: MiaB-like tRNA modifying enzyme YliG%3B RNA modification enzyme%2C MiaB family~PFAM: protein of unknown function UPF0004 %3B Radical SAM domain protein~KEGG: dia:Dtpsy_2494 ribosomal protein S12 methylthiotransferase~SMART: Elongator protein 3/MiaB/NifB gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1321 Alide_1322 Alide_1322 Alide_1322 1396975 1397334 - Peptidylprolyl isomerase KEGG: dia:Dtpsy_2493 peptidylprolyl isomerase~PFAM: peptidylprolyl isomerase FKBP-type gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1322 Alide_1323 Alide_1323 Alide_1323 1397450 1397755 - putative transcriptional regulator KEGG: dia:Dtpsy_2492 putative transcriptional regulator gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1323 Alide_1324 Alide_1324 Alide_1324 1397907 1398836 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ajs:Ajs_3144 LysR family transcriptional regulator gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1324 Alide_1325 Alide_1325 Alide_1325 1398945 1399874 + pyruvate carboxyltransferase PFAM: pyruvate carboxyltransferase~KEGG: dia:Dtpsy_2490 pyruvate carboxyltransferase gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1325 Alide_1326 Alide_1326 Alide_1326 1399905 1401098 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: ajs:Ajs_3142 L-carnitine dehydratase/bile acid-inducible protein F gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1326 Alide_1327 Alide_1327 Alide_1327 1401132 1402133 + hypothetical protein KEGG: dia:Dtpsy_2488 hypothetical protein gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1327 Alide_1328 Alide_1328 Alide_1328 1402207 1403157 - 2-dehydropantoate 2-reductase TIGRFAM: 2-dehydropantoate 2-reductase~KEGG: ajs:Ajs_3139 2-dehydropantoate 2-reductase~PFAM: Ketopantoate reductase ApbA/PanE domain protein gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1328 Alide_1329 Alide_1329 Alide_1329 1403204 1403887 - methyladenine glycosylase PFAM: methyladenine glycosylase~KEGG: neu:NE0447 hypothetical protein gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1329 Alide_1330 Alide_1330 Alide_1330 1403919 1404026 - hypothetical protein KEGG: rhi:NGR_b07690 hypothetical protein gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1330 Alide_1331 Alide_1331 Alide_1331 1404153 1406561 - RNA polymerase sigma factor RpoD KEGG: dia:Dtpsy_2485 RNA polymerase%2C sigma 70 subunit%2C RpoD~TIGRFAM: RNA polymerase sigma factor RpoD%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 non-essential domain protein%3B sigma-70 1.1 domain protein%3B sigma-70 region 1.2%3B sigma-70 region 2 domain protein%3B sigma-70 region 3 domain protein%3B sigma-70 region 4 domain protein gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1331 Alide_1332 Alide_1332 Alide_1332 1406820 1408745 - DNA primase TIGRFAM: DNA primase~PFAM: DNA primase catalytic core domain%3B TOPRIM domain-containing protein%3B DNA primase%2C DnaB-helicase binding domain~KEGG: ajs:Ajs_3137 DNA primase~SMART: Toprim sub domain-containing protein gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1332 Alide_1333 Alide_1333 Alide_1333 1409085 1410731 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: dia:Dtpsy_2483 AMP-dependent synthetase and ligase gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1333 Alide_1334 Alide_1334 Alide_1334 1410788 1412350 - phospholipase D/Transphosphatidylase KEGG: maq:Maqu_3283 phospholipase D/transphosphatidylase~PFAM: phospholipase D/Transphosphatidylase~SMART: phospholipase D/Transphosphatidylase gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1334 Alide_1335 Alide_1335 Alide_1335 1412347 1413486 - regulatory protein LysR PFAM: regulatory protein LysR~KEGG: ajs:Ajs_3130 molybdate metabolism transcriptional regulator gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1335 Alide_1336 Alide_1336 Alide_1336 1413537 1414271 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ajs:Ajs_3129 binding-protein-dependent transport systems inner membrane component gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1336 Alide_1337 Alide_1337 Alide_1337 1414268 1415044 + ABC transporter related protein KEGG: ajs:Ajs_3128 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1337 Alide_1338 Alide_1338 Alide_1338 1415041 1415868 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: ajs:Ajs_3127 extracellular solute-binding protein gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1338 Alide_1339 Alide_1339 Alide_1339 1415889 1416818 - hypothetical protein KEGG: pna:Pnap_0462 hypothetical protein gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1339 Alide_1340 Alide_1340 Alide_1340 1416933 1418009 - molybdate ABC transporter%2C ATPase subunit TIGRFAM: molybdate ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B TOBE domain-containing protein~KEGG: ajs:Ajs_3126 molybdate ABC transporter%2C ATPase subunit~SMART: AAA ATPase gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1340 Alide_1341 Alide_1341 Alide_1341 1418006 1418689 - molybdate ABC transporter%2C inner membrane subunit KEGG: ajs:Ajs_3125 molybdate ABC transporter%2C inner membrane subunit~TIGRFAM: molybdate ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1341 Alide_1342 Alide_1342 Alide_1342 1418783 1419547 - molybdenum ABC transporter%2C periplasmic molybdate-binding protein KEGG: dia:Dtpsy_2470 molybdenum ABC transporter%2C periplasmic molybdate-binding protein~TIGRFAM: molybdenum ABC transporter%2C periplasmic molybdate-binding protein~PFAM: extracellular solute-binding protein family 1 gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1342 Alide_1343 Alide_1343 Alide_1343 1419614 1420405 + TOBE domain-containing protein PFAM: TOBE domain-containing protein%3B regulatory protein LysR~KEGG: dia:Dtpsy_2469 putative transcriptional regulator%2C ModE family gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1343 Alide_1344 Alide_1344 Alide_1344 1420568 1421338 + ABC transporter related protein KEGG: dia:Dtpsy_2468 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1344 Alide_1345 Alide_1345 Alide_1345 1421340 1422050 + ABC transporter related protein KEGG: ajs:Ajs_3121 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1345 Alide_1346 Alide_1346 Alide_1346 1422100 1423302 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: dia:Dtpsy_2466 extracellular ligand-binding receptor gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1346 Alide_1347 Alide_1347 Alide_1347 1423374 1424573 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: ajs:Ajs_3119 extracellular ligand-binding receptor gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1347 Alide_1348 Alide_1348 Alide_1348 1424620 1425504 + inner-membrane translocator KEGG: dia:Dtpsy_2464 inner-membrane translocator~manually curated~PFAM: inner-membrane translocator gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1348 Alide_1349 Alide_1349 Alide_1349 1425523 1426524 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dia:Dtpsy_2463 inner-membrane translocator gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1349 Alide_1350 Alide_1350 Alide_1350 1426580 1427674 - secreted hydrolase-like protein KEGG: ajs:Ajs_3116 secreted hydrolase-like protein gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1350 Alide_1351 Alide_1351 Alide_1351 1427671 1428741 - Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: ajs:Ajs_3115 pyridoxal-5'-phosphate-dependent enzyme%2C beta subunit gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1351 Alide_1352 Alide_1352 Alide_1352 1428760 1431399 - protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: dia:Dtpsy_2460 protein of unknown function DUF214 gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1352 Alide_1353 Alide_1353 Alide_1353 1431532 1431960 + heat shock protein Hsp20 PFAM: heat shock protein Hsp20~KEGG: ajs:Ajs_3113 heat shock protein HSP20 gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1353 Alide_1354 Alide_1354 Alide_1354 1431970 1432641 - ABC transporter related protein KEGG: dia:Dtpsy_2458 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1354 Alide_1355 Alide_1355 Alide_1355 1432703 1433665 - tRNA delta(2)-isopentenylpyrophosphate transferase TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase~KEGG: dia:Dtpsy_2457 tRNA delta(2)-isopentenylpyrophosphate transferase~PFAM: tRNA isopentenyltransferase gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1355 Alide_1356 Alide_1356 Alide_1356 1433655 1434623 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ajs:Ajs_3110 Bcr/CflA subfamily drug resistance transporter gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1356 Alide_1357 Alide_1357 Alide_1357 1434805 1435749 + D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region~KEGG: dia:Dtpsy_2455 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1357 Alide_1358 Alide_1358 Alide_1358 1435746 1436183 - histidine triad (HIT) protein PFAM: histidine triad (HIT) protein~KEGG: dia:Dtpsy_2454 histidine triad (HIT) protein gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1358 Alide_1359 Alide_1359 Alide_1359 1436293 1437315 - porin Gram-negative type PFAM: porin Gram-negative type~KEGG: dia:Dtpsy_2452 porin gram-negative type gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1359 Alide_1360 Alide_1360 Alide_1360 1437563 1438186 + cyclic nucleotide-binding protein KEGG: dia:Dtpsy_2451 transcriptional regulator%2C Crp/Fnr family~PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~SMART: regulatory protein Crp gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1360 Alide_1361 Alide_1361 Alide_1361 1438472 1440568 + diguanylate cyclase TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: GGDEF domain containing protein%3B PAS fold-3 domain protein~KEGG: dia:Dtpsy_2450 diguanylate cyclase with PAS/PAC sensor~SMART: GGDEF domain containing protein%3B PAS domain containing protein gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1361 Alide_1362 Alide_1362 Alide_1362 1440705 1442294 + ABC transporter related protein KEGG: dia:Dtpsy_2447 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1362 Alide_1363 Alide_1363 Alide_1363 1442281 1443354 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dia:Dtpsy_2446 inner-membrane translocator gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1363 Alide_1364 Alide_1364 Alide_1364 1443354 1444274 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dia:Dtpsy_2445 inner-membrane translocator gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1364 Alide_1365 Alide_1365 Alide_1365 1444297 1445442 + basic membrane lipoprotein PFAM: basic membrane lipoprotein~KEGG: dia:Dtpsy_2444 basic membrane lipoprotein gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1365 Alide_1366 Alide_1366 Alide_1366 1445483 1446649 + basic membrane lipoprotein PFAM: basic membrane lipoprotein~KEGG: dia:Dtpsy_2443 basic membrane lipoprotein gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1366 Alide_1367 Alide_1367 Alide_1367 1446700 1447998 - FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: rso:RSc3407 putative oxidoreductase protein gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1367 Alide_1368 Alide_1368 Alide_1368 1447995 1448741 - ABC transporter related protein KEGG: rso:RSc3408 ABC transporter ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1368 Alide_1369 Alide_1369 Alide_1369 1448738 1449403 - polar amino acid ABC transporter%2C inner membrane subunit KEGG: rso:RSc3409 amino-acid transmembrane ABC transporter protein~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1369 Alide_1370 Alide_1370 Alide_1370 1449430 1450200 - extracellular solute-binding protein family 3 KEGG: rsl:RPSI07_0031 putative amino acid-binding periplasmic (Pbp) abc transporter protein~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3 gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1370 Alide_1371 Alide_1371 Alide_1371 1450404 1451198 + Transcriptional regulator IclR KEGG: rso:RSc3411 transcription regulator protein~PFAM: Transcriptional regulator IclR %3B regulatory protein IclR~SMART: regulatory protein IclR gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1371 Alide_1372 Alide_1372 Alide_1372 1451237 1451590 + protein of unknown function DUF861 cupin_3 PFAM: protein of unknown function DUF861 cupin_3~KEGG: reu:Reut_C6271 hypothetical protein gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1372 Alide_1373 Alide_1373 Alide_1373 1451683 1452735 + adenosine deaminase TIGRFAM: adenosine deaminase~KEGG: dia:Dtpsy_2442 adenosine deaminase~PFAM: adenosine/AMP deaminase gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1373 Alide_1374 Alide_1374 Alide_1374 1452741 1454048 - Palmitoyl-CoA hydrolase KEGG: bav:BAV1558 acyl coenzyme A thioester hydrolase~PFAM: acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1374 Alide_1375 Alide_1375 Alide_1375 1454048 1455616 - extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: bav:BAV1559 ABC transporter%2C substrate binding protein gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1375 Alide_1376 Alide_1376 Alide_1376 1455740 1456735 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~KEGG: rsl:RPSI07_1508 dipeptide transport ATP-binding (ABC superfamily)~SMART: AAA ATPase gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1376 Alide_1377 Alide_1377 Alide_1377 1456732 1457706 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~KEGG: rpf:Rpic12D_1762 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~SMART: AAA ATPase gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1377 Alide_1378 Alide_1378 Alide_1378 1457703 1458602 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bav:BAV1562 ABC transporter%2C permease protein gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1378 Alide_1379 Alide_1379 Alide_1379 1458599 1459573 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bav:BAV1563 ABC transporter%2C permease protein gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1379 Alide_1380 Alide_1380 Alide_1380 1459570 1460568 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: rsc:RCFBP_11452 putative transcriptional regulator%2C LysR family gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1380 Alide_1381 Alide_1381 Alide_1381 1460751 1461398 - arylformamidase TIGRFAM: arylformamidase~KEGG: dia:Dtpsy_2438 arylformamidase~PFAM: cyclase family protein gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1381 Alide_1382 Alide_1382 Alide_1382 1461400 1461723 - protein of unknown function UPF0153 PFAM: protein of unknown function UPF0153~KEGG: dia:Dtpsy_2436 protein of unknown function UPF0153 gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1382 Alide_1383 Alide_1383 Alide_1383 1461843 1462142 + FeoA family protein PFAM: FeoA family protein~KEGG: dia:Dtpsy_2435 FeoA family protein gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1383 Alide_1384 Alide_1384 Alide_1384 1462139 1464079 + ferrous iron transport protein B KEGG: dia:Dtpsy_2434 ferrous iron transport protein B~TIGRFAM: ferrous iron transport protein B%3B small GTP-binding protein~PFAM: Ferrous iron transport protein B domain-containing protein%3B GTP-binding protein HSR1-related%3B nucleoside recognition domain protein%3B Ferrous iron transport B domain-containing protein gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1384 Alide_1385 Alide_1385 Alide_1385 1464081 1464326 + hypothetical protein KEGG: dac:Daci_2177 hypothetical protein gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1385 Alide_1386 Alide_1386 Alide_1386 1464386 1464733 - protein of unknown function UPF0153 PFAM: protein of unknown function UPF0153~KEGG: ajs:Ajs_3004 hypothetical protein gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1386 Alide_1387 Alide_1387 Alide_1387 1464833 1465042 + hypothetical protein KEGG: pde:Pden_4005 hypothetical protein gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1387 Alide_1388 Alide_1388 Alide_1388 1465049 1465582 + hypothetical protein KEGG: bbr:BB2477 hypothetical protein gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1388 Alide_1389 Alide_1389 Alide_1389 1465907 1466827 - ornithine carbamoyltransferase TIGRFAM: ornithine carbamoyltransferase~KEGG: dia:Dtpsy_2430 ornithine carbamoyltransferase~PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain%3B aspartate/ornithine carbamoyltransferase Asp/Orn-binding region gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1389 Alide_1390 Alide_1390 Alide_1390 1466844 1468040 - acetylornithine and succinylornithine aminotransferase KEGG: dia:Dtpsy_2429 acetylornithine aminotransferase~TIGRFAM: acetylornithine and succinylornithine aminotransferase~PFAM: aminotransferase class-III gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1390 Alide_1391 Alide_1391 Alide_1391 1468278 1468592 + hypothetical protein KEGG: dia:Dtpsy_2428 hypothetical protein gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1391 Alide_1392 Alide_1392 Alide_1392 1468636 1469181 - hypothetical protein manually curated~KEGG: vap:Vapar_5710 hypothetical protein gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1392 Alide_1393 Alide_1393 Alide_1393 1469213 1469701 - hypothetical protein KEGG: rfr:Rfer_0842 hypothetical protein gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1393 Alide_1394 Alide_1394 Alide_1394 1470142 1470441 - ribosomal protein S20 KEGG: dia:Dtpsy_2427 30S ribosomal protein S20~TIGRFAM: ribosomal protein S20~PFAM: ribosomal protein S20 gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1394 Alide_1395 Alide_1395 Alide_1395 1470546 1472111 + integral membrane protein MviN KEGG: ajs:Ajs_2999 integral membrane protein MviN~TIGRFAM: integral membrane protein MviN~PFAM: virulence factor MVIN family protein gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1395 Alide_1396 Alide_1396 Alide_1396 1472128 1472976 + hypothetical protein KEGG: ajs:Ajs_2998 hypothetical protein gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1396 Alide_1397 Alide_1397 Alide_1397 1472978 1473373 - UspA domain-containing protein PFAM: UspA domain-containing protein~KEGG: dia:Dtpsy_2423 UspA domain protein gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1397 Alide_1398 Alide_1398 Alide_1398 1473605 1474690 - hypothetical protein KEGG: dia:Dtpsy_2422 hypothetical protein gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1398 Alide_1399 Alide_1399 Alide_1399 1474724 1475764 - phosphoribosylformylglycinamidine cyclo-ligase TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase~KEGG: ajs:Ajs_2994 phosphoribosylaminoimidazole synthetase~PFAM: AIR synthase related protein domain protein%3B AIR synthase related protein gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1399 Alide_1400 Alide_1400 Alide_1400 1475921 1477873 - gamma-glutamyltransferase TIGRFAM: gamma-glutamyltransferase~KEGG: aci:ACIAD0929 gamma-glutamyltranspeptidase precursor~PFAM: gamma-glutamyltranspeptidase gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1400 Alide_1401 Alide_1401 Alide_1401 1478196 1478903 + DnaA regulatory inactivator Hda KEGG: aav:Aave_1971 chromosomal replication initiator%2C DnaA~TIGRFAM: DnaA regulatory inactivator Hda~PFAM: Chromosomal replication initiator DnaA gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1401 Alide_1402 Alide_1402 Alide_1402 1478900 1479574 + HAD-superfamily subfamily IB hydrolase%2C TIGR01490 KEGG: dia:Dtpsy_2419 HAD-superfamily subfamily IB hydrolase%2C TIGR01490~TIGRFAM: HAD-superfamily subfamily IB hydrolase%2C TIGR01490%3B HAD-superfamily hydrolase%2C subfamily IB (PSPase-like)~PFAM: Haloacid dehalogenase domain protein hydrolase gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1402 Alide_1403 Alide_1403 Alide_1403 1479571 1481139 + poly(A) polymerase KEGG: dia:Dtpsy_2418 poly(A) polymerase~TIGRFAM: poly(A) polymerase~PFAM: Polynucleotide adenylyltransferase region gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1403 Alide_1404 Alide_1404 Alide_1404 1481136 1481654 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase~KEGG: ajs:Ajs_2990 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase~PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1404 Alide_1405 Alide_1405 Alide_1405 1481850 1482830 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: bav:BAV2928 bactoprenol glucosyl transferase gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1405 Alide_1406 Alide_1406 Alide_1406 1482827 1484404 + glycosyl transferase family 39 PFAM: glycosyl transferase family 39~KEGG: dac:Daci_2190 glycosyl transferase family protein gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1406 Alide_1407 Alide_1407 Alide_1407 1484352 1484762 - GtrA family protein PFAM: GtrA family protein~KEGG: dar:Daro_2757 GtrA-like protein gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1407 Alide_1408 Alide_1408 Alide_1408 1484781 1485635 + YdjC family protein PFAM: YdjC family protein~KEGG: vap:Vapar_5574 YdjC family protein gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1408 Alide_1409 Alide_1409 Alide_1409 1485693 1486664 - hypothetical protein KEGG: ajs:Ajs_2989 hypothetical protein gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1409 Alide_1410 Alide_1410 Alide_1410 1486714 1487697 - hypothetical protein KEGG: reu:Reut_B5440 hypothetical protein gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1410 Alide_1411 Alide_1411 Alide_1411 1487750 1488760 - uroporphyrinogen decarboxylase KEGG: reu:Reut_B5441 uroporphyrinogen decarboxylase gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1411 Alide_1412 Alide_1412 Alide_1412 1488971 1489888 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: reu:Reut_B5443 regulatory protein%2C LysR:LysR%2C substrate-binding gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1412 Alide_1413 Alide_1413 Alide_1413 1490005 1491153 + Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: hch:HCH_06702 cysteine synthase gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1413 Alide_1414 Alide_1414 Alide_1414 1491160 1492221 - oxidoreductase FAD/NAD(P)-binding domain protein PFAM: oxidoreductase FAD/NAD(P)-binding domain protein%3B Oxidoreductase FAD-binding domain protein%3B ferredoxin~KEGG: dia:Dtpsy_2414 CDP-6-deoxy-delta-3%2C4-glucoseen reductase gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1414 Alide_1415 Alide_1415 Alide_1415 1492290 1493231 + TrkA-N domain protein PFAM: TrkA-N domain protein~KEGG: ajs:Ajs_2986 NAD-dependent epimerase/dehydratase gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1415 Alide_1416 Alide_1416 Alide_1416 1493219 1493851 - hypothetical protein KEGG: dia:Dtpsy_2412 hypothetical protein gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1416 Alide_1417 Alide_1417 Alide_1417 1493886 1494410 - hypothetical protein KEGG: dia:Dtpsy_2411 hypothetical protein gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1417 Alide_1418 Alide_1418 Alide_1418 1494538 1495626 + transposase IS4 family protein KEGG: ajs:Ajs_3918 transposase%2C IS4 family protein~manually curated~PFAM: transposase IS4 family protein gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1418 Alide_1419 Alide_1419 Alide_1419 1495938 1496906 - hypothetical protein KEGG: ajs:Ajs_2981 hypothetical protein gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1419 Alide_1420 Alide_1420 Alide_1420 1496975 1498216 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: dia:Dtpsy_2408 L-carnitine dehydratase/bile acid-inducible protein F gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1420 Alide_1421 Alide_1421 Alide_1421 1498276 1499472 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: dia:Dtpsy_2407 acyl-CoA dehydrogenase domain protein gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1421 Alide_1422 Alide_1422 Alide_1422 1499644 1500594 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ajs:Ajs_2978 LysR family transcriptional regulator gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1422 Alide_1423 Alide_1423 Alide_1423 1500589 1500981 - LrgB family protein PFAM: LrgB family protein~KEGG: dia:Dtpsy_2405 LrgB family protein gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1423 Alide_1424 Alide_1424 Alide_1424 1500981 1501256 - LrgA family protein PFAM: LrgA family protein~KEGG: dia:Dtpsy_2404 LrgA family protein gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1424 Alide_1425 Alide_1425 Alide_1425 1501561 1501788 + hypothetical protein KEGG: dia:Dtpsy_2403 hypothetical protein gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1425 Alide_1426 Alide_1426 Alide_1426 1501821 1501934 + hypothetical protein KEGG: dgr:Dgri_GH23134 GH23134 gene product from transcript GH23134-RA gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1426 Alide_1427 Alide_1427 Alide_1427 1501952 1502248 - hypothetical protein KEGG: ajs:Ajs_2619 hypothetical protein gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1427 Alide_1428 Alide_1428 Alide_1428 1502404 1503006 - protein of unknown function DUF1555 PFAM: protein of unknown function DUF1555~KEGG: tbd:Tbd_0194 hypothetical protein gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1428 Alide_1429 Alide_1429 Alide_1429 1503230 1503547 - phage head-tail adaptor TIGRFAM: phage head-tail adaptor~KEGG: bcm:Bcenmc03_1291 phage head-tail adaptor gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1429 Alide_1430 Alide_1430 Alide_1430 1503544 1503822 - uncharacterized phage protein TIGRFAM: uncharacterized phage protein (possible DNA packaging)~KEGG: bcm:Bcenmc03_1290 phage protein DNA packaging protein gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1430 Alide_1431 Alide_1431 Alide_1431 1504003 1505508 - Terminase PFAM: Terminase~KEGG: pap:PSPA7_5155 phage terminase%2C large subunit gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1431 Alide_1432 Alide_1432 Alide_1432 1505531 1505941 - terminase small subunit KEGG: xbo:XBJ1_2042 terminase small subunit gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1432 Alide_1433 Alide_1433 Alide_1433 1506007 1506360 - HNH endonuclease KEGG: pap:PSPA7_5153 HNH endonuclease~PFAM: HNH endonuclease~SMART: HNH nuclease gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1433 Alide_1434 Alide_1434 Alide_1434 1506357 1507550 - phage portal protein%2C HK97 family KEGG: bcm:Bcenmc03_1286 HK97 family phage portal protein~TIGRFAM: phage portal protein%2C HK97 family~PFAM: portal protein gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1434 Alide_1435 Alide_1435 Alide_1435 1507547 1508095 - phage prohead protease%2C HK97 family KEGG: bcm:Bcenmc03_1285 HK97 family phage prohead protease~TIGRFAM: phage prohead protease%2C HK97 family~PFAM: peptidase U35 phage prohead HK97 gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1435 Alide_1436 Alide_1436 Alide_1436 1508106 1509332 - major capsid protein HK97 KEGG: bcm:Bcenmc03_1284 major capsid protein HK97 gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1436 Alide_1437 Alide_1437 Alide_1437 1509771 1510352 - hypothetical protein manually curated~KEGG: ajs:Ajs_1730 hypothetical protein gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1437 Alide_1438 Alide_1438 Alide_1438 1510352 1511218 - pseudogene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1438 Alide_1439 Alide_1439 Alide_1439 1511343 1511666 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1439 Alide_1440 Alide_1440 Alide_1440 1511663 1512577 + Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_0907 integrase catalytic subunit gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1440 Alide_1441 Alide_1441 Alide_1441 1512609 1512824 - hypothetical protein KEGG: rpi:Rpic_2748 hypothetical protein gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1441 Alide_1442 Alide_1442 Alide_1442 1512821 1513069 - Prophage CP4-57 regulatory PFAM: Prophage CP4-57 regulatory~KEGG: bra:BRADO6209 putative prophage CP4-57 regulatory protein gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1442 Alide_1443 Alide_1443 Alide_1443 1513127 1513936 - hypothetical protein KEGG: tbd:Tbd_2676 hypothetical protein gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1443 Alide_1444 Alide_1444 Alide_1444 1514026 1514514 - hypothetical protein KEGG: rpc:RPC_3988 tetratricopeptide TPR_2 gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1444 Alide_1445 Alide_1445 Alide_1445 1514616 1515851 - integrase family protein PFAM: integrase family protein~KEGG: lch:Lcho_2200 integrase family protein gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1445 Alide_1446 Alide_1446 Alide_1446 1516206 1518056 - peptidase M14 carboxypeptidase A KEGG: ajs:Ajs_2610 peptidase M14%2C carboxypeptidase A~PFAM: peptidase M14 carboxypeptidase A~SMART: peptidase M14 carboxypeptidase A gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1446 Alide_1447 Alide_1447 Alide_1447 1518157 1519851 - DEAD/DEAH box helicase domain protein KEGG: ajs:Ajs_2609 DEAD/DEAH box helicase domain-containing protein~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1447 Alide_1448 Alide_1448 Alide_1448 1520109 1521770 + ABC transporter related protein KEGG: dia:Dtpsy_1200 putative ABC transporter ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1448 Alide_1449 Alide_1449 Alide_1449 1521777 1523108 - TRAP transporter solute receptor TAXI family protein KEGG: ajs:Ajs_2606 TRAP transporter solute receptor TAXI family protein gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1449 Alide_1450 Alide_1450 Alide_1450 1523115 1524128 - peptidase S58 DmpA PFAM: peptidase S58 DmpA~KEGG: ajs:Ajs_2605 peptidase S58%2C DmpA gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1450 Alide_1451 Alide_1451 Alide_1451 1524167 1524646 - protein of unknown function DUF411 PFAM: protein of unknown function DUF411~KEGG: dia:Dtpsy_1206 protein of unknown function DUF411 gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1451 Alide_1452 Alide_1452 Alide_1452 1524673 1525158 - blue (type 1) copper domain protein PFAM: blue (type 1) copper domain protein~KEGG: ajs:Ajs_2601 blue (type1) copper domain-containing protein gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1452 Alide_1453 Alide_1453 Alide_1453 1525259 1525606 - hypothetical protein KEGG: dia:Dtpsy_1211 hypothetical protein gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1453 Alide_1454 Alide_1454 Alide_1454 1525624 1526250 - protein of unknown function DUF161 KEGG: dia:Dtpsy_1212 protein of unknown function DUF161~manually curated~PFAM: protein of unknown function DUF161 gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1454 Alide_1455 Alide_1455 Alide_1455 1526397 1528412 - heavy metal translocating P-type ATPase KEGG: ajs:Ajs_2594 heavy metal translocating P-type ATPase~TIGRFAM: heavy metal translocating P-type ATPase%3B cadmium-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B Haloacid dehalogenase domain protein hydrolase gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1455 Alide_1456 Alide_1456 Alide_1456 1528453 1528911 + Transcription regulator MerR DNA binding protein KEGG: dia:Dtpsy_1215 transcriptional regulator%2C MerR family~PFAM: Transcription regulator MerR DNA binding%3B regulatory protein MerR~SMART: regulatory protein MerR gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1456 Alide_1457 Alide_1457 Alide_1457 1529012 1529827 + protein of unknown function DUF140 PFAM: protein of unknown function DUF140~KEGG: dia:Dtpsy_1216 protein of unknown function DUF140 gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1457 Alide_1458 Alide_1458 Alide_1458 1529849 1530832 + Mammalian cell entry related domain protein PFAM: Mammalian cell entry related domain protein~KEGG: dia:Dtpsy_1217 mammalian cell entry related domain protein gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1458 Alide_1459 Alide_1459 Alide_1459 1530996 1531679 + hypothetical protein KEGG: dia:Dtpsy_1218 hypothetical protein gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1459 Alide_1460 Alide_1460 Alide_1460 1531661 1532494 - hypothetical protein KEGG: vap:Vapar_0122 hypothetical protein gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1460 Alide_1461 Alide_1461 Alide_1461 1532518 1534044 - carbohydrate kinase%2C YjeF related protein KEGG: ajs:Ajs_2588 carbohydrate kinase%2C YjeF related protein~TIGRFAM: carbohydrate kinase%2C YjeF related protein~PFAM: protein of unknown function UPF0031%3B YjeF-family domain-containing protein gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1461 Alide_1462 Alide_1462 Alide_1462 1534074 1535315 - D-amino-acid dehydrogenase KEGG: ajs:Ajs_2587 D-amino-acid dehydrogenase~PFAM: FAD dependent oxidoreductase gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1462 Alide_1463 Alide_1463 Alide_1463 1535370 1536716 - Amidase PFAM: Amidase~KEGG: ajs:Ajs_2586 amidase gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1463 Alide_1464 Alide_1464 Alide_1464 1536935 1537687 + ribosomal protein S2 KEGG: ajs:Ajs_2585 30S ribosomal protein S2~TIGRFAM: ribosomal protein S2~PFAM: ribosomal protein S2 gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1464 Alide_1465 Alide_1465 Alide_1465 1537802 1538698 + translation elongation factor Ts KEGG: dia:Dtpsy_1224 elongation factor Ts~TIGRFAM: translation elongation factor Ts~PFAM: Translation elongation factor EFTs/EF1B dimerisation%3B ubiquitin-associated- domain-containing protein gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1465 Alide_1466 Alide_1466 Alide_1466 1538752 1539474 + uridylate kinase KEGG: dia:Dtpsy_1225 uridylate kinase~TIGRFAM: uridylate kinase~PFAM: aspartate/glutamate/uridylate kinase gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1466 Alide_1467 Alide_1467 Alide_1467 1539524 1540084 + ribosome recycling factor KEGG: dia:Dtpsy_1226 ribosome recycling factor~TIGRFAM: ribosome recycling factor~PFAM: ribosome recycling factor gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1467 Alide_1468 Alide_1468 Alide_1468 1540096 1540833 + undecaprenyl diphosphate synthase TIGRFAM: undecaprenyl diphosphate synthase~KEGG: dia:Dtpsy_1227 undecaprenyl diphosphate synthase~PFAM: Di-trans-poly-cis-decaprenylcistransferase gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1468 Alide_1469 Alide_1469 Alide_1469 1540872 1541717 + phosphatidate cytidylyltransferase PFAM: phosphatidate cytidylyltransferase~KEGG: dia:Dtpsy_1228 phosphatidate cytidylyltransferase gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1469 Alide_1470 Alide_1470 Alide_1470 1541721 1542896 + 1-deoxy-D-xylulose 5-phosphate reductoisomerase TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase~KEGG: dia:Dtpsy_1229 1-deoxy-D-xylulose 5-phosphate reductoisomerase~PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1470 Alide_1471 Alide_1471 Alide_1471 1542999 1544360 + membrane-associated zinc metalloprotease TIGRFAM: membrane-associated zinc metalloprotease~PFAM: peptidase M50%3B PDZ/DHR/GLGF domain protein~KEGG: ajs:Ajs_2578 peptidase RseP~SMART: PDZ/DHR/GLGF domain protein gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1471 Alide_1472 Alide_1472 Alide_1472 1544406 1546703 + outer membrane protein assembly complex%2C YaeT protein KEGG: dia:Dtpsy_1231 outer membrane protein assembly complex%2C YaeT protein~TIGRFAM: outer membrane protein assembly complex%2C YaeT protein~PFAM: surface antigen (D15)%3B surface antigen variable number repeat-containing protein gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1472 Alide_1473 Alide_1473 Alide_1473 1546703 1547227 + outer membrane chaperone Skp (OmpH) PFAM: outer membrane chaperone Skp (OmpH)~KEGG: ajs:Ajs_2576 outer membrane chaperone Skp (OmpH) gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1473 Alide_1474 Alide_1474 Alide_1474 1547256 1548254 + UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase KEGG: dia:Dtpsy_1233 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase~TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase~PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase%2C non-repeat region%3B transferase hexapeptide repeat containing protein gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1474 Alide_1475 Alide_1475 Alide_1475 1548251 1548691 + beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ KEGG: aav:Aave_1834 (3R)-hydroxymyristoyl-ACP dehydratase~TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ~PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1475 Alide_1476 Alide_1476 Alide_1476 1548717 1549505 + acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase~KEGG: ajs:Ajs_2573 UDP-N-acetylglucosamine acyltransferase~PFAM: transferase hexapeptide repeat containing protein gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1476 Alide_1477 Alide_1477 Alide_1477 1549517 1550671 + lipid-A-disaccharide synthase PFAM: glycosyl transferase family 19~manually curated~KEGG: dia:Dtpsy_1236 lipid-A-disaccharide synthase~TIGRFAM: lipid-A-disaccharide synthase gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1477 Alide_1478 Alide_1478 Alide_1478 1550646 1551266 + Ribonuclease H KEGG: dia:Dtpsy_1237 ribonuclease HII~PFAM: ribonuclease HII/HIII gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1478 Alide_1479 Alide_1479 Alide_1479 1551263 1552039 + tRNA/rRNA methyltransferase (SpoU) PFAM: tRNA/rRNA methyltransferase (SpoU)~KEGG: dia:Dtpsy_1238 tRNA/rRNA methyltransferase (SpoU) gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1479 Alide_1480 Alide_1480 Alide_1480 1552355 1553599 + integrase family protein PFAM: integrase family protein~KEGG: glo:Glov_1428 integrase family protein gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1480 Alide_1481 Alide_1481 Alide_1481 1554055 1554378 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1481 Alide_1482 Alide_1482 Alide_1482 1554375 1555289 + Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_0907 integrase catalytic subunit gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1482 Alide_1483 Alide_1483 Alide_1483 1555326 1555454 + pseudogene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1483 Alide_1484 Alide_1484 Alide_1484 1555753 1556760 - Inositol phosphatase/fructose-16-bisphosphatase PFAM: Inositol phosphatase/fructose-16-bisphosphatase~KEGG: ctt:CtCNB1_2987 inositol gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1484 Alide_1485 Alide_1485 Alide_1485 1556781 1559489 - aminopeptidase N KEGG: dia:Dtpsy_2249 aminopeptidase N~TIGRFAM: aminopeptidase N~PFAM: Peptidase M1 membrane alanine aminopeptidase gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1485 Alide_1486 Alide_1486 Alide_1486 1559501 1560605 - Peptide chain release factor 2 manually curated~KEGG: bpm:BURPS1710b_3602 hypothetical protein gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1486 Alide_1487 Alide_1487 Alide_1487 1560674 1561678 - diaminopimelate dehydrogenase TIGRFAM: diaminopimelate dehydrogenase~KEGG: ajs:Ajs_2757 diaminopimelate dehydrogenase~PFAM: dihydrodipicolinate reductase gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1487 Alide_1488 Alide_1488 Alide_1488 1561801 1562733 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: dia:Dtpsy_2246 alpha/beta hydrolase fold protein gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1488 Alide_1489 Alide_1489 Alide_1489 1562853 1564181 + extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: dac:Daci_4801 extracellular solute-binding protein gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1489 Alide_1490 Alide_1490 Alide_1490 1564245 1565975 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: dac:Daci_4800 binding-protein-dependent transport systems inner membrane component gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1490 Alide_1491 Alide_1491 Alide_1491 1565979 1567064 + ABC transporter related protein KEGG: dac:Daci_4799 ABC transporter related~PFAM: ABC transporter related%3B Transport-associated OB domain-containing protein~SMART: AAA ATPase gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1491 Alide_1492 Alide_1492 Alide_1492 1567134 1568195 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: ajs:Ajs_2755 aldo/keto reductase gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1492 Alide_1493 Alide_1493 Alide_1493 1568259 1568759 + ybaK/ebsC protein KEGG: ajs:Ajs_2754 YbaK/EbsC protein~TIGRFAM: ybaK/ebsC protein~PFAM: YbaK/prolyl-tRNA synthetase associated region gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1493 Alide_1494 Alide_1494 Alide_1494 1568791 1569423 + protein of unknown function DUF205 PFAM: protein of unknown function DUF205~KEGG: dia:Dtpsy_2243 protein of unknown function DUF205 gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1494 Alide_1495 Alide_1495 Alide_1495 1569426 1570424 - putative metal dependent phosphohydrolase KEGG: dia:Dtpsy_2242 putative metal dependent phosphohydrolase gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1495 Alide_1496 Alide_1496 Alide_1496 1570454 1571101 - hypothetical protein KEGG: ajs:Ajs_2751 hypothetical protein gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1496 Alide_1497 Alide_1497 Alide_1497 1571112 1571597 - protein of unknown function DUF520 PFAM: protein of unknown function DUF520~KEGG: ajs:Ajs_2750 putative nucleotide-binding protein gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1497 Alide_1498 Alide_1498 Alide_1498 1571662 1572750 + UDP-N-acetylenolpyruvoylglucosamine reductase TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase~KEGG: dia:Dtpsy_2239 UDP-N-acetylenolpyruvoylglucosamine reductase~PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein%3B FAD linked oxidase domain protein gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1498 Alide_1499 Alide_1499 Alide_1499 1572858 1573232 - SPW repeat-containing protein KEGG: dac:Daci_4779 SPW repeat-containing protein gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1499 Alide_1500 Alide_1500 Alide_1500 1573396 1574067 + conserved hypothetical protein KEGG: dia:Dtpsy_2235 hypothetical protein~TIGRFAM: conserved hypothetical protein~PFAM: protein of unknown function DUF165 gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1500 Alide_1501 Alide_1501 Alide_1501 1574064 1574783 + exsB protein KEGG: dia:Dtpsy_2234 ExsB protein~TIGRFAM: exsB protein~PFAM: Queuosine synthesis-like gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1501 Alide_1502 Alide_1502 Alide_1502 1575163 1577307 + Hydantoinase/oxoprolinase PFAM: Hydantoinase/oxoprolinase%3B Hydantoinaseoxoprolinase domain protein~KEGG: reu:Reut_C6172 acetone carboxylase%2C beta subunit gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1502 Alide_1503 Alide_1503 Alide_1503 1577319 1579643 + Hydantoinase B/oxoprolinase PFAM: Hydantoinase B/oxoprolinase~KEGG: tmz:Tmz1t_3470 hydantoinase B/oxoprolinase gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1503 Alide_1504 Alide_1504 Alide_1504 1579668 1580174 + Acetone carboxylase gamma subunit PFAM: Acetone carboxylase gamma subunit~KEGG: eba:ebA4702 acetone carboxylase gamma subunit gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1504 Alide_1505 Alide_1505 Alide_1505 1580360 1582342 + sigma-54 factor interaction domain-containing protein KEGG: tmz:Tmz1t_3466 GAF modulated sigma54 specific transcriptional regulator%2C fis family~PFAM: sigma-54 factor interaction domain-containing protein%3B GAF domain protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1505 Alide_1506 Alide_1506 Alide_1506 1582445 1583788 - argininosuccinate synthase TIGRFAM: argininosuccinate synthase~KEGG: dia:Dtpsy_2233 argininosuccinate synthase~PFAM: argininosuccinate synthase gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1506 Alide_1507 Alide_1507 Alide_1507 1583816 1584133 - protein of unknown function DUF1255 PFAM: protein of unknown function DUF1255~KEGG: dia:Dtpsy_2232 protein of unknown function DUF1255 gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1507 Alide_1508 Alide_1508 Alide_1508 1584194 1584865 - 17 kDa surface antigen KEGG: dia:Dtpsy_2231 17 kDa surface antigen gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1508 Alide_1509 Alide_1509 Alide_1509 1584986 1585372 - arsenate reductase-like protein PFAM: arsenate reductase and related~KEGG: dia:Dtpsy_2230 arsenate reductase and related gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1509 Alide_1510 Alide_1510 Alide_1510 1585391 1586743 + FolC bifunctional protein TIGRFAM: FolC bifunctional protein~KEGG: ajs:Ajs_2739 FolC bifunctional protein~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1510 Alide_1511 Alide_1511 Alide_1511 1586753 1587589 + Sporulation domain-containing protein PFAM: Sporulation domain-containing protein~KEGG: dia:Dtpsy_2228 sporulation domain protein gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1511 Alide_1512 Alide_1512 Alide_1512 1587603 1588091 + Colicin V production protein PFAM: Colicin V production protein%3B Protein of unknown function DUF2474~KEGG: dia:Dtpsy_2227 colicin V production protein gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1512 Alide_1513 Alide_1513 Alide_1513 1588155 1589663 + amidophosphoribosyltransferase KEGG: dia:Dtpsy_2226 amidophosphoribosyltransferase~TIGRFAM: amidophosphoribosyltransferase~PFAM: glutamine amidotransferase class-II%3B phosphoribosyltransferase gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1513 Alide_1514 Alide_1514 Alide_1514 1589792 1591006 + O-succinylhomoserine sulfhydrylase TIGRFAM: O-succinylhomoserine sulfhydrylase~KEGG: dac:Daci_4768 O-succinylhomoserine sulfhydrylase~PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1514 Alide_1515 Alide_1515 Alide_1515 1591003 1592406 + glutamyl-tRNA synthetase KEGG: dia:Dtpsy_2224 glutamyl-tRNA synthetase~TIGRFAM: glutamyl-tRNA synthetase~PFAM: Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C catalytic domain gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1515 Alide_1516 Alide_1516 Alide_1516 1593200 1593958 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_2108 short-chain dehydrogenase/reductase SDR gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1516 Alide_1517 Alide_1517 Alide_1517 1594278 1594751 + hypothetical protein KEGG: cfl:Cfla_1172 lipoate--protein ligase gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1517 Alide_1518 Alide_1518 Alide_1518 1594753 1595382 + hypothetical protein manually curated~KEGG: cci:CC1G_12013 tRNA (guanine-N2-)-methyltransferase gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1518 Alide_1519 Alide_1519 Alide_1519 1595373 1595495 + hypothetical protein gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1519 Alide_1520 Alide_1520 Alide_1520 1595522 1597036 - transposase IS66 KEGG: dia:Dtpsy_2523 transposase IS66 gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1520 Alide_1521 Alide_1521 Alide_1521 1597119 1597451 - IS66 Orf2 family protein PFAM: IS66 Orf2 family protein~KEGG: rfr:Rfer_2710 IS66 Orf2 like gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1521 Alide_1522 Alide_1522 Alide_1522 1597448 1597876 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rfr:Rfer_2709 transposase IS3/IS911 gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1522 Alide_1523 Alide_1523 Alide_1523 1598218 1598979 - hypothetical protein KEGG: cbt:CLH_2513 1%2C4-beta-N-acetylmuramidase gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1523 Alide_1524 Alide_1524 Alide_1524 1599009 1599821 - Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_3784 integrase catalytic subunit gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1524 Alide_1525 Alide_1525 Alide_1525 1599839 1600105 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ctt:CtCNB1_1899 transposase IS3/IS911 gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1525 Alide_1526 Alide_1526 Alide_1526 1600574 1601818 - transposase KEGG: xac:XAC3233 transposase gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1526 Alide_1527 Alide_1527 Alide_1527 1601829 1602530 - hypothetical protein KEGG: reu:Reut_C5919 hypothetical protein gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1527 Alide_1528 Alide_1528 Alide_1528 1602530 1602829 - hypothetical protein KEGG: mpt:Mpe_B0404 hypothetical protein gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1528 Alide_1529 Alide_1529 Alide_1529 1603005 1603586 - LexA repressor TIGRFAM: LexA repressor~KEGG: bpy:Bphyt_3718 LexA repressor~PFAM: Peptidase S24/S26A/S26B%2C conserved region gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1529 Alide_1530 Alide_1530 Alide_1530 1603885 1604208 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1530 Alide_1531 Alide_1531 Alide_1531 1604205 1605119 + Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_0907 integrase catalytic subunit gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1531 Alide_1532 Alide_1532 Alide_1532 1605339 1606388 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: ajs:Ajs_1607 extracellular solute-binding protein gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1532 Alide_1533 Alide_1533 Alide_1533 1606671 1607225 - phasin family protein KEGG: dia:Dtpsy_1366 phasin family protein~TIGRFAM: phasin family protein~PFAM: Phasin gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1533 Alide_1534 Alide_1534 Alide_1534 1607483 1607956 + thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: dia:Dtpsy_1367 thioesterase superfamily protein gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1534 Alide_1535 Alide_1535 Alide_1535 1608106 1609305 + nicotinate phosphoribosyltransferase KEGG: dia:Dtpsy_1368 nicotinate phosphoribosyltransferase~TIGRFAM: nicotinate phosphoribosyltransferase~PFAM: Nicotinate phosphoribosyltransferase-like gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1535 Alide_1536 Alide_1536 Alide_1536 1609353 1610765 + putative transmembrane protein KEGG: ajs:Ajs_2491 putative transmembrane protein gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1536 Alide_1537 Alide_1537 Alide_1537 1610782 1611762 + D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region~KEGG: dia:Dtpsy_1370 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1537 Alide_1538 Alide_1538 Alide_1538 1611836 1613434 + protein of unknown function DUF195 PFAM: protein of unknown function DUF195~KEGG: azo:azo2787 putative RumC-like protein gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1538 Alide_1539 Alide_1539 Alide_1539 1613431 1614594 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: dia:Dtpsy_1372 major facilitator superfamily MFS_1 gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1539 Alide_1540 Alide_1540 Alide_1540 1614609 1615472 - Conserved hypothetical protein CHP00730 PFAM: Conserved hypothetical protein CHP00730~KEGG: ajs:Ajs_2487 hypothetical protein gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1540 Alide_1541 Alide_1541 Alide_1541 1615602 1615997 - CrcB protein KEGG: dia:Dtpsy_1374 camphor resistance protein CrcB~TIGRFAM: CrcB protein~PFAM: Camphor resistance CrcB protein gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1541 Alide_1542 Alide_1542 Alide_1542 1616021 1617796 - peptidase M14 carboxypeptidase A PFAM: peptidase M14 carboxypeptidase A~KEGG: dia:Dtpsy_1379 hypothetical protein gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1542 Alide_1543 Alide_1543 Alide_1543 1617799 1618170 - Na+/H+ antiporter subunit PFAM: Na+/H+ antiporter subunit~KEGG: dia:Dtpsy_1381 Na+/H+ antiporter subunit gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1543 Alide_1544 Alide_1544 Alide_1544 1618167 1618448 - multiple resistance and pH regulation protein F PFAM: multiple resistance and pH regulation protein F~KEGG: dia:Dtpsy_1382 multiple resistance and pH regulation protein F gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1544 Alide_1545 Alide_1545 Alide_1545 1618445 1618936 - cation antiporter PFAM: cation antiporter~KEGG: dia:Dtpsy_1383 putative monovalent cation/H+ antiporter subunit E gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1545 Alide_1546 Alide_1546 Alide_1546 1618933 1620645 - NADH/Ubiquinone/plastoquinone (complex I) PFAM: NADH/Ubiquinone/plastoquinone (complex I)~KEGG: ajs:Ajs_2476 putative monovalent cation/H+ antiporter subunit D gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1546 Alide_1547 Alide_1547 Alide_1547 1620707 1621072 - NADH-ubiquinone oxidoreductase chain 4L PFAM: NADH-ubiquinone oxidoreductase chain 4L~KEGG: dia:Dtpsy_1385 putative monovalent cation/H+ antiporter subunit C gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1547 Alide_1548 Alide_1548 Alide_1548 1621073 1624033 - NADH/Ubiquinone/plastoquinone (complex I) PFAM: NADH/Ubiquinone/plastoquinone (complex I)%3B Na+/H+ antiporter MnhB subunit-related protein~KEGG: dia:Dtpsy_1386 putative monovalent cation/H+ antiporter subunit A gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1548 Alide_1549 Alide_1549 Alide_1549 1624122 1624442 - hypothetical protein KEGG: ajs:Ajs_2473 hypothetical protein gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1549 Alide_1550 Alide_1550 Alide_1550 1624442 1625600 - pseudogene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1550 Alide_1551 Alide_1551 Alide_1551 1625590 1625901 - hypothetical protein KEGG: dia:Dtpsy_1389 hypothetical protein gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1551 Alide_1552 Alide_1552 Alide_1552 1626107 1626892 - PpiC-type peptidyl-prolyl cis-trans isomerase PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase~KEGG: dia:Dtpsy_2031 PpiC-type peptidyl-prolyl cis-trans isomerase gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1552 Alide_1553 Alide_1553 Alide_1553 1626959 1627237 - BolA family protein PFAM: BolA family protein~KEGG: dia:Dtpsy_2030 BolA family protein gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1553 Alide_1554 Alide_1554 Alide_1554 1627234 1627791 - intracellular septation protein A KEGG: ajs:Ajs_1675 intracellular septation protein A~TIGRFAM: intracellular septation protein A~PFAM: Intracellular septation protein A gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1554 Alide_1555 Alide_1555 Alide_1555 1627788 1628201 - methionine-R-sulfoxide reductase TIGRFAM: methionine-R-sulfoxide reductase~KEGG: dia:Dtpsy_2028 methionine-R-sulfoxide reductase~PFAM: Methionine sulfoxide reductase B gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1555 Alide_1556 Alide_1556 Alide_1556 1628198 1629328 - pseudogene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1556 Alide_1557 Alide_1557 Alide_1557 1629329 1630627 + pseudogene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1557 Alide_1558 Alide_1558 Alide_1558 1630768 1632003 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: dia:Dtpsy_2025 extracellular ligand-binding receptor gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1558 Alide_1559 Alide_1559 Alide_1559 1632077 1633030 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dia:Dtpsy_2024 inner-membrane translocator gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1559 Alide_1560 Alide_1560 Alide_1560 1633035 1634369 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dia:Dtpsy_2023 inner-membrane translocator gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1560 Alide_1561 Alide_1561 Alide_1561 1634366 1635154 + ABC transporter related protein KEGG: dia:Dtpsy_2022 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1561 Alide_1562 Alide_1562 Alide_1562 1635154 1635849 + ABC transporter related protein KEGG: dia:Dtpsy_2021 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1562 Alide_1563 Alide_1563 Alide_1563 1636044 1638143 + 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B Enoyl-CoA hydratase/isomerase%3B 3-hydroxyacyl-CoA dehydrogenase domain-containing protein~KEGG: ajs:Ajs_1684 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1563 Alide_1564 Alide_1564 Alide_1564 1638178 1639347 + acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~KEGG: dia:Dtpsy_2019 acetyl-CoA acetyltransferase~PFAM: Thiolase-like gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1564 Alide_1565 Alide_1565 Alide_1565 1639575 1640477 + extracellular solute-binding protein family 3 KEGG: ctt:CtCNB1_1865 glutamate-binding protein precursor~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3 gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1565 Alide_1566 Alide_1566 Alide_1566 1640481 1641143 + polar amino acid ABC transporter%2C inner membrane subunit KEGG: dac:Daci_4388 polar amino acid ABC transporter%2C inner membrane subunit~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1566 Alide_1567 Alide_1567 Alide_1567 1641140 1641940 + polar amino acid ABC transporter%2C inner membrane subunit KEGG: ctt:CtCNB1_1867 amino acid ABC transporter%2C permease protein PEB1~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1567 Alide_1568 Alide_1568 Alide_1568 1642373 1644274 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: dia:Dtpsy_2017 acyl-CoA dehydrogenase domain protein gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1568 Alide_1569 Alide_1569 Alide_1569 1644307 1644810 + flavodoxin/nitric oxide synthase PFAM: flavodoxin/nitric oxide synthase~KEGG: dia:Dtpsy_2016 NAD(P)H dehydrogenase (quinone) gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1569 Alide_1570 Alide_1570 Alide_1570 1645051 1645899 + protein of unknown function DUF6 transmembrane KEGG: bpt:Bpet3196 hypothetical protein~manually curated~PFAM: protein of unknown function DUF6 transmembrane gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1570 Alide_1571 Alide_1571 Alide_1571 1646348 1646500 - hypothetical protein KEGG: psa:PST_2393 NAD-specific glutamate dehydrogenase gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1571 Alide_1572 Alide_1572 Alide_1572 1646493 1646921 - hypothetical protein KEGG: eli:ELI_12715 phosphoribosylamine--glycine ligase gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1572 Alide_1573 Alide_1573 Alide_1573 1646978 1647124 - hypothetical protein gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1573 Alide_1574 Alide_1574 Alide_1574 1647121 1647537 - VRR-NUC domain-containing protein KEGG: bvi:Bcep1808_6849 hypothetical protein~manually curated~PFAM: VRR-NUC domain-containing protein gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1574 Alide_1575 Alide_1575 Alide_1575 1647578 1649530 - Primase 2 PFAM: Primase 2~KEGG: tin:Tint_1139 primase 2 gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1575 Alide_1576 Alide_1576 Alide_1576 1649530 1649817 - hypothetical protein KEGG: ddr:Deide_01150 glutaminyl-tRNA synthetase gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1576 Alide_1577 Alide_1577 Alide_1577 1649814 1650167 - hypothetical protein KEGG: vap:Vapar_3800 hypothetical protein gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1577 Alide_1578 Alide_1578 Alide_1578 1650248 1650499 - hypothetical protein KEGG: ajs:Ajs_3336 hypothetical protein gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1578 Alide_1579 Alide_1579 Alide_1579 1650604 1651428 - hypothetical protein KEGG: pna:Pnap_0969 hypothetical protein gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1579 Alide_1580 Alide_1580 Alide_1580 1651537 1652871 - integrase family protein PFAM: integrase family protein~KEGG: tin:Tint_1145 integrase family protein gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1580 Alide_1581 Alide_1581 Alide_1581 1653351 1654697 - type I secretion outer membrane protein%2C TolC family KEGG: dia:Dtpsy_1835 type I secretion outer membrane protein%2C TolC family~TIGRFAM: type I secretion outer membrane protein%2C TolC family~PFAM: outer membrane efflux protein gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1581 Alide_1582 Alide_1582 Alide_1582 1654714 1655052 - Rhodanese domain protein SMART: Rhodanese domain protein~KEGG: dia:Dtpsy_1836 rhodanese domain protein gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1582 Alide_1583 Alide_1583 Alide_1583 1655071 1655781 - Protein-L-isoaspartate(D-aspartate) O-methyltransferase PFAM: Methyltransferase type 11~KEGG: dia:Dtpsy_1837 protein-L-isoaspartate(D-aspartate) O-methyltransferase~SMART: Ribosomal RNA adenine methylase transferase-like gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1583 Alide_1584 Alide_1584 Alide_1584 1655832 1656494 - regulatory protein TetR PFAM: regulatory protein TetR~KEGG: ajs:Ajs_2029 TetR family transcriptional regulator gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1584 Alide_1585 Alide_1585 Alide_1585 1656643 1657191 + peptide methionine sulfoxide reductase TIGRFAM: peptide methionine sulfoxide reductase~KEGG: ajs:Ajs_2030 peptide methionine sulfoxide reductase~PFAM: Methionine sulfoxide reductase A gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1585 Alide_1586 Alide_1586 Alide_1586 1657216 1657599 + hypothetical protein KEGG: ajs:Ajs_2032 hypothetical protein gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1586 Alide_1587 Alide_1587 Alide_1587 1657772 1659823 + TonB-dependent receptor PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: dia:Dtpsy_1842 TonB-dependent receptor gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1587 Alide_1588 Alide_1588 Alide_1588 1660326 1661198 + hypothetical protein KEGG: ajs:Ajs_2034 hypothetical protein gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1588 Alide_1589 Alide_1589 Alide_1589 1661250 1662470 + chromate transporter%2C chromate ion transporter (CHR) family KEGG: ajs:Ajs_2035 chromate transporter~TIGRFAM: chromate transporter%2C chromate ion transporter (CHR) family~PFAM: Chromate transporter gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1589 Alide_1590 Alide_1590 Alide_1590 1662602 1663540 + Auxin Efflux Carrier PFAM: Auxin Efflux Carrier~KEGG: dia:Dtpsy_1882 auxin efflux carrier gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1590 Alide_1591 Alide_1591 Alide_1591 1663533 1664195 - pyridoxamine 5'-phosphate oxidase TIGRFAM: pyridoxamine 5'-phosphate oxidase~KEGG: dia:Dtpsy_1881 pyridoxamine 5'-phosphate oxidase~PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1591 Alide_1592 Alide_1592 Alide_1592 1664212 1664805 - ChaC family protein PFAM: ChaC family protein~KEGG: dia:Dtpsy_1879 ChaC family protein gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1592 Alide_1593 Alide_1593 Alide_1593 1664868 1665389 + OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: dia:Dtpsy_1878 OmpA/MotB domain protein gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1593 Alide_1594 Alide_1594 Alide_1594 1665438 1666484 - protein of unknown function DUF72 PFAM: protein of unknown function DUF72~KEGG: dia:Dtpsy_1999 protein of unknown function DUF72 gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1594 Alide_1595 Alide_1595 Alide_1595 1666485 1666889 - hypothetical protein KEGG: dia:Dtpsy_1998 hypothetical protein gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1595 Alide_1596 Alide_1596 Alide_1596 1666982 1669366 + Tex-like protein KEGG: ajs:Ajs_1707 RNA-binding S1 domain-containing protein~PFAM: Tex-like protein-like%3B RNA binding S1 domain protein~SMART: Resolvase RNase H domain protein fold gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1596 Alide_1597 Alide_1597 Alide_1597 1669382 1670356 - hypothetical protein KEGG: bbr:BB0544 hypothetical protein gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1597 Alide_1598 Alide_1598 Alide_1598 1670379 1670777 - protein of unknown function DUF35 PFAM: protein of unknown function DUF35~KEGG: bbr:BB0545 hypothetical protein gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1598 Alide_1599 Alide_1599 Alide_1599 1670774 1671955 - acetyl-CoA acetyltransferase KEGG: bbr:BB0546 acetyl-CoA acetyltransferase gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1599 Alide_1600 Alide_1600 Alide_1600 1671952 1672935 - hypothetical protein KEGG: reu:Reut_A0842 hypothetical protein gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1600 Alide_1601 Alide_1601 Alide_1601 1672973 1673773 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: rpd:RPD_4223 short-chain dehydrogenase/reductase SDR gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1601 Alide_1602 Alide_1602 Alide_1602 1673800 1675356 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: bbr:BB0547 putative ligase gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1602 Alide_1603 Alide_1603 Alide_1603 1675362 1676354 - hypothetical protein KEGG: bbr:BB0564 hypothetical protein gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1603 Alide_1604 Alide_1604 Alide_1604 1676445 1677452 + regulatory protein LacI KEGG: bbr:BB0548 LacI family regulatory protein~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1604 Alide_1605 Alide_1605 Alide_1605 1677543 1678394 - Citrate synthase PFAM: Citrate synthase~KEGG: rme:Rmet_4144 citrate synthase gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1605 Alide_1606 Alide_1606 Alide_1606 1678391 1679593 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: reu:Reut_B4958 L-carnitine dehydratase/bile acid-inducible protein F gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1606 Alide_1607 Alide_1607 Alide_1607 1679596 1680561 - hypothetical protein KEGG: aav:Aave_3937 hypothetical protein gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1607 Alide_1608 Alide_1608 Alide_1608 1680594 1681553 - extra-cytoplasmic solute receptor KEGG: rme:Rmet_4146 extra-cytoplasmic solute receptor gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1608 Alide_1609 Alide_1609 Alide_1609 1681604 1682614 - amidohydrolase 2 PFAM: amidohydrolase 2~KEGG: bam:Bamb_4804 amidohydrolase 2 gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1609 Alide_1610 Alide_1610 Alide_1610 1682763 1683473 + regulatory protein IclR KEGG: cti:pRALTA_0434 putative transcriptional regulator%2C IclR family~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1610 Alide_1611 Alide_1611 Alide_1611 1683529 1684362 + Metal-dependent hydrolase HDOD PFAM: Metal-dependent hydrolase HDOD~KEGG: ajs:Ajs_1708 putative signal transduction protein gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1611 Alide_1612 Alide_1612 Alide_1612 1684458 1685333 + fumarylacetoacetate (FAA) hydrolase PFAM: fumarylacetoacetate (FAA) hydrolase~KEGG: ajs:Ajs_1712 hydratase/decarboxylase gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1612 Alide_1613 Alide_1613 Alide_1613 1685346 1686329 + alpha/beta hydrolase domain-containing protein KEGG: ajs:Ajs_1713 alpha/beta hydrolase domain-containing protein gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1613 Alide_1614 Alide_1614 Alide_1614 1686339 1687199 + thioesterase superfamily protein PFAM: thioesterase superfamily protein%3B GCN5-related N-acetyltransferase~KEGG: dia:Dtpsy_1990 thioesterase superfamily protein gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1614 Alide_1615 Alide_1615 Alide_1615 1687203 1687784 - protein of unknown function DUF336 PFAM: protein of unknown function DUF336~KEGG: dac:Daci_1203 hypothetical protein gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1615 Alide_1616 Alide_1616 Alide_1616 1687809 1688453 - response regulator receiver KEGG: dac:Daci_1204 two component LuxR family transcriptional regulator~PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1616 Alide_1617 Alide_1617 Alide_1617 1688450 1689931 - ATP-binding region ATPase domain protein KEGG: dac:Daci_1205 histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1617 Alide_1618 Alide_1618 Alide_1618 1689954 1691147 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: dac:Daci_2202 major facilitator transporter gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1618 Alide_1619 Alide_1619 Alide_1619 1691140 1691631 - CMP/dCMP deaminase zinc-binding protein PFAM: CMP/dCMP deaminase zinc-binding~KEGG: dia:Dtpsy_2009 CMP/dCMP deaminase zinc-binding gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1619 Alide_1620 Alide_1620 Alide_1620 1691665 1692606 - folate-binding protein YgfZ KEGG: ajs:Ajs_1715 glycine cleavage T protein (aminomethyl transferase)~TIGRFAM: folate-binding protein YgfZ~PFAM: glycine cleavage T protein (aminomethyl transferase)%3B Glycine cleavage T-protein barrel gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1620 Alide_1621 Alide_1621 Alide_1621 1692653 1693648 + aminodeoxychorismate lyase PFAM: aminodeoxychorismate lyase~KEGG: ajs:Ajs_1716 aminodeoxychorismate lyase gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1621 Alide_1622 Alide_1622 Alide_1622 1693645 1694301 + thymidylate kinase TIGRFAM: thymidylate kinase~KEGG: dia:Dtpsy_1987 thymidylate kinase~PFAM: thymidylate kinase gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1622 Alide_1623 Alide_1623 Alide_1623 1694298 1695293 + DNA-directed DNA polymerase KEGG: ajs:Ajs_1718 DNA-directed DNA polymerase gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1623 Alide_1624 Alide_1624 Alide_1624 1695310 1695669 + type IV pilus assembly PilZ PFAM: type IV pilus assembly PilZ~KEGG: dia:Dtpsy_1985 type IV pilus assembly PilZ gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1624 Alide_1625 Alide_1625 Alide_1625 1695731 1696540 + hydrolase%2C TatD family KEGG: ajs:Ajs_1720 TatD family hydrolase~TIGRFAM: hydrolase%2C TatD family~PFAM: TatD-related deoxyribonuclease gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1625 Alide_1626 Alide_1626 Alide_1626 1696537 1697217 + hypothetical protein KEGG: dia:Dtpsy_1983 ankyrin gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1626 Alide_1627 Alide_1627 Alide_1627 1697412 1697657 + hypothetical protein KEGG: hoh:Hoch_1597 hypothetical protein gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1627 Alide_1628 Alide_1628 Alide_1628 1697689 1698906 + hypothetical protein KEGG: app:CAP2UW1_0424 hypothetical protein gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1628 Alide_1629 Alide_1629 Alide_1629 1698910 1699587 - GntR domain protein KEGG: aav:Aave_3515 GntR family transcriptional regulator~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1629 Alide_1630 Alide_1630 Alide_1630 1699851 1701098 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: reh:H16_B1760 major facilitator superfamily transporter AAHS family protein gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1630 Alide_1631 Alide_1631 Alide_1631 1701126 1701887 + LamB/YcsF family protein PFAM: LamB/YcsF family protein~KEGG: aav:Aave_3513 LamB/YcsF family protein gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1631 Alide_1632 Alide_1632 Alide_1632 1701910 1702722 + protein of unknown function DUF1445 PFAM: protein of unknown function DUF1445~KEGG: reh:H16_B1759 hypothetical protein gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1632 Alide_1633 Alide_1633 Alide_1633 1702730 1704331 + urea amidolyase related protein SMART: Allophanate hydrolase subunit 2%3B Allophanate hydrolase subunit 1~TIGRFAM: urea amidolyase related protein~KEGG: reu:Reut_A2450 allophanate hydrolase subunit 2~PFAM: Allophanate hydrolase subunit 2%3B Allophanate hydrolase subunit 1 gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1633 Alide_1634 Alide_1634 Alide_1634 1704325 1706067 + Carbamoyl-phosphate synthase L chain ATP-binding protein PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B biotin carboxylase domain protein%3B biotin/lipoyl attachment domain-containing protein~KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1634 Alide_1635 Alide_1635 Alide_1635 1706130 1707911 - lipid A ABC exporter%2C fused ATPase and inner membrane subunits MsbA TIGRFAM: lipid A ABC exporter%2C fused ATPase and inner membrane subunits MsbA~PFAM: ABC transporter related%3B ABC transporter transmembrane region~KEGG: dia:Dtpsy_1982 lipid A ABC exporter%2C fused ATPase and inner membrane subunits MsbA~SMART: AAA ATPase gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1635 Alide_1636 Alide_1636 Alide_1636 1708045 1709367 + Tol-Pal system beta propeller repeat protein TolB KEGG: dia:Dtpsy_1981 translocation protein TolB~TIGRFAM: Tol-Pal system beta propeller repeat protein TolB~PFAM: TolB domain-containing protein%3B WD40-like beta Propeller containing protein gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1636 Alide_1637 Alide_1637 Alide_1637 1709411 1709953 + peptidoglycan-associated lipoprotein KEGG: dia:Dtpsy_1980 peptidoglycan-associated lipoprotein~TIGRFAM: peptidoglycan-associated lipoprotein~PFAM: OmpA/MotB domain protein gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1637 Alide_1638 Alide_1638 Alide_1638 1709953 1710741 + tol-pal system protein YbgF TIGRFAM: tol-pal system protein YbgF~KEGG: ajs:Ajs_1725 TPR repeat-containing protein gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1638 Alide_1639 Alide_1639 Alide_1639 1710750 1711514 + UBA/THIF-type NAD/FAD binding protein PFAM: UBA/THIF-type NAD/FAD binding protein~KEGG: aav:Aave_3403 UBA/ThiF-type NAD/FAD binding protein gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1639 Alide_1640 Alide_1640 Alide_1640 1711662 1712675 - integrase family protein PFAM: integrase family protein~KEGG: hse:Hsero_0876 site-specific phage recombinase/integrase gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1640 Alide_1641 Alide_1641 Alide_1641 1713077 1713679 - hypothetical protein manually curated~KEGG: rpt:Rpal_3050 hypothetical protein gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1641 Alide_1642 Alide_1642 Alide_1642 1713776 1713994 - hypothetical protein KEGG: pan:PODANSg1201 hypothetical protein gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1642 Alide_1643 Alide_1643 Alide_1643 1713987 1714727 - hypothetical protein KEGG: bph:Bphy_1918 hypothetical protein gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1643 Alide_1644 Alide_1644 Alide_1644 1714724 1714933 - hypothetical protein KEGG: spx:SPG_1105 hypothetical protein gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1644 Alide_1645 Alide_1645 Alide_1645 1714923 1715348 - hypothetical protein KEGG: mes:Meso_1184 hypothetical protein gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1645 Alide_1646 Alide_1646 Alide_1646 1715345 1715581 - hypothetical protein KEGG: scb:SCAB_33391 hypothetical protein gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1646 Alide_1647 Alide_1647 Alide_1647 1715612 1716016 - hypothetical protein KEGG: dac:Daci_3203 hypothetical protein gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1647 Alide_1648 Alide_1648 Alide_1648 1716016 1716663 - YqaJ viral recombinase family PFAM: YqaJ viral recombinase family~KEGG: dac:Daci_1915 exonuclease%2C phage-type gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1648 Alide_1649 Alide_1649 Alide_1649 1716660 1717478 - ERF family protein PFAM: ERF family protein~KEGG: mrd:Mrad2831_5739 ERF family protein gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1649 Alide_1650 Alide_1650 Alide_1650 1717590 1717691 - hypothetical protein gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1650 Alide_1651 Alide_1651 Alide_1651 1717688 1717945 - hypothetical protein KEGG: dac:Daci_1917 hypothetical protein gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1651 Alide_1652 Alide_1652 Alide_1652 1717942 1718136 - hypothetical protein KEGG: sml:Smlt2731 putative general secretion pathway protein H gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1652 Alide_1653 Alide_1653 Alide_1653 1718365 1718586 - La ribonucleoprotein domain family%2C member 4B KEGG: bta:505723 La ribonucleoprotein domain family%2C member 4B gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1653 Alide_1654 Alide_1654 Alide_1654 1719473 1719718 - hypothetical protein KEGG: tgr:Tgr7_1656 hypothetical protein gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1654 Alide_1655 Alide_1655 Alide_1655 1719747 1720067 - hypothetical protein KEGG: pag:PLES_07901 hypothetical protein gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1655 Alide_1656 Alide_1656 Alide_1656 1720538 1721392 + hypothetical protein KEGG: vha:VIBHAR_02019 hypothetical protein gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1656 Alide_1657 Alide_1657 Alide_1657 1721458 1721697 + hypothetical protein KEGG: vap:Vapar_6373 hypothetical protein gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1657 Alide_1658 Alide_1658 Alide_1658 1721814 1723001 + hypothetical protein KEGG: tmz:Tmz1t_0111 hypothetical protein gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1658 Alide_1659 Alide_1659 Alide_1659 1723072 1723551 - nuclease (SNase domain-containing protein) KEGG: vap:Vapar_4558 nuclease (SNase domain protein)~PFAM: nuclease (SNase domain-containing protein)~SMART: nuclease (SNase domain-containing protein) gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1659 Alide_1660 Alide_1660 Alide_1660 1723554 1724177 - protein of unknown function DUF1555 PFAM: protein of unknown function DUF1555~KEGG: gsu:GSU1949 hypothetical protein gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1660 Alide_1661 Alide_1661 Alide_1661 1724965 1725153 - pseudogene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1661 Alide_1662 Alide_1662 Alide_1662 1725180 1725950 - Peptidase S24/S26A/S26B%2C conserved region protein PFAM: Peptidase S24/S26A/S26B%2C conserved region~KEGG: aav:Aave_1607 putative prophage repressor gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1662 Alide_1663 Alide_1663 Alide_1663 1725964 1726182 + helix-turn-helix domain protein KEGG: mbn:Mboo_1574 XRE family transcriptional regulator~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1663 Alide_1664 Alide_1664 Alide_1664 1726206 1726451 - hypothetical protein KEGG: chl:Chy400_3663 secretion protein HlyD family protein gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1664 Alide_1665 Alide_1665 Alide_1665 1726611 1726979 + hypothetical protein KEGG: pca:Pcar_1084 transposase and inactivated derivatives gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1665 Alide_1666 Alide_1666 Alide_1666 1726976 1727167 + hypothetical protein gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1666 Alide_1667 Alide_1667 Alide_1667 1727169 1727369 + putative neutral zinc metalloprotease KEGG: scb:SCAB_27931 putative neutral zinc metalloprotease gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1667 Alide_1668 Alide_1668 Alide_1668 1727369 1728274 + hypothetical protein KEGG: ssn:SSON_1580 unknown prophage protein gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1668 Alide_1669 Alide_1669 Alide_1669 1728271 1729656 + DnaB domain protein helicase domain protein PFAM: DnaB domain protein helicase domain protein~KEGG: bvi:Bcep1808_1163 DnaB domain-containing protein gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1669 Alide_1670 Alide_1670 Alide_1670 1729660 1730163 + hypothetical protein KEGG: aav:Aave_1760 hypothetical protein gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1670 Alide_1671 Alide_1671 Alide_1671 1730167 1730361 + hypothetical protein KEGG: sen:SACE_5054 mannitol dehydrogenase gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1671 Alide_1672 Alide_1672 Alide_1672 1730361 1730693 + endodeoxyribonuclease RusA PFAM: endodeoxyribonuclease RusA~KEGG: bav:BAV1307 phage endonuclease gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1672 Alide_1673 Alide_1673 Alide_1673 1730686 1731207 + hypothetical protein KEGG: bpt:Bpet0967 hypothetical protein gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1673 Alide_1674 Alide_1674 Alide_1674 1731204 1731704 + hypothetical protein KEGG: aav:Aave_1763 hypothetical protein gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1674 Alide_1675 Alide_1675 Alide_1675 1731673 1732185 + hypothetical protein KEGG: aav:Aave_1697 hypothetical protein gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1675 Alide_1676 Alide_1676 Alide_1676 1732241 1733017 + hypothetical protein KEGG: aav:Aave_2352 hypothetical protein gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1676 Alide_1677 Alide_1677 Alide_1677 1733020 1734627 + putative terminase large subunit protein KEGG: aav:Aave_2353 putative terminase large subunit protein gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1677 Alide_1678 Alide_1678 Alide_1678 1734634 1736901 + putative phage associated protein KEGG: aav:Aave_1700 putative phage associated protein gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1678 Alide_1679 Alide_1679 Alide_1679 1737077 1738075 + hypothetical protein KEGG: aav:Aave_1702 hypothetical protein gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1679 Alide_1680 Alide_1680 Alide_1680 1738144 1739433 + putative phage associated protein KEGG: ngk:NGK_0673 putative phage associated protein gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1680 Alide_1681 Alide_1681 Alide_1681 1739505 1739981 + putative phage associated protein KEGG: aav:Aave_1704 putative phage associated protein gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1681 Alide_1682 Alide_1682 Alide_1682 1740000 1740488 + hypothetical protein KEGG: aav:Aave_1705 putative phage associated protein gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1682 Alide_1683 Alide_1683 Alide_1683 1740490 1741155 + hypothetical protein KEGG: aav:Aave_1706 hypothetical protein gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1683 Alide_1684 Alide_1684 Alide_1684 1741165 1743267 + hypothetical protein KEGG: aav:Aave_1716 hypothetical protein gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1684 Alide_1685 Alide_1685 Alide_1685 1743278 1744084 - hypothetical protein KEGG: bpr:GBP346_A1728 hypothetical protein gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1685 Alide_1686 Alide_1686 Alide_1686 1744215 1745294 + hypothetical protein KEGG: neu:NE1381 hypothetical protein gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1686 Alide_1687 Alide_1687 Alide_1687 1745291 1745614 + hypothetical protein KEGG: hse:Hsero_1548 hypothetical protein gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1687 Alide_1688 Alide_1688 Alide_1688 1745632 1746114 + hypothetical protein manually curated~KEGG: hse:Hsero_1549 hypothetical protein gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1688 Alide_1689 Alide_1689 Alide_1689 1746187 1746852 - hypothetical protein KEGG: lpf:lpl0182 hypothetical protein gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1689 Alide_1690 Alide_1690 Alide_1690 1746806 1747702 - SMF family protein PFAM: SMF family protein~KEGG: amc:MADE_00299 smf protein gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1690 Alide_1691 Alide_1691 Alide_1691 1747850 1756453 + hypothetical protein KEGG: ctt:CtCNB1_2656 hypothetical protein gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1691 Alide_1692 Alide_1692 Alide_1692 1756529 1756930 + hypothetical protein KEGG: rer:RER_25240 hypothetical protein gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1692 Alide_1693 Alide_1693 Alide_1693 1756940 1758016 + hypothetical protein KEGG: pag:PLES_13611 hypothetical protein gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1693 Alide_1694 Alide_1694 Alide_1694 1758026 1758706 + hypothetical protein KEGG: olu:OSTLU_23918 predicted protein gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1694 Alide_1695 Alide_1695 Alide_1695 1758700 1759866 + hypothetical protein KEGG: aav:Aave_1709 hypothetical protein gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1695 Alide_1696 Alide_1696 Alide_1696 1759863 1762352 + hypothetical protein KEGG: gym:GYMC10_1290 transcriptional regulator%2C AraC family gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1696 Alide_1697 Alide_1697 Alide_1697 1762352 1762783 + hypothetical protein KEGG: sml:Smlt1972 putative phage-related protein gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1697 Alide_1698 Alide_1698 Alide_1698 1762786 1764591 + hypothetical protein KEGG: aav:Aave_1715 hypothetical protein gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1698 Alide_1699 Alide_1699 Alide_1699 1764649 1765068 + hypothetical protein KEGG: aav:Aave_1722 hypothetical protein gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1699 Alide_1700 Alide_1700 Alide_1700 1765065 1765601 + hypothetical protein KEGG: aav:Aave_1723 hypothetical protein gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1700 Alide_1701 Alide_1701 Alide_1701 1765605 1766123 + hypothetical protein KEGG: aav:Aave_1724 hypothetical protein gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1701 Alide_1702 Alide_1702 Alide_1702 1766135 1767376 + hypothetical protein KEGG: ent:Ent638_0148 hypothetical protein gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1702 Alide_1703 Alide_1703 Alide_1703 1767437 1767742 + hypothetical protein KEGG: aav:Aave_1728 hypothetical protein gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1703 Alide_1704 Alide_1704 Alide_1704 1767739 1768323 + putative phage lysozyme KEGG: bbr:BB3482 putative phage lysozyme gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1704 Alide_1705 Alide_1705 Alide_1705 1768320 1768583 + hypothetical protein KEGG: pha:PSHAa0938 hypothetical protein gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1705 Alide_1706 Alide_1706 Alide_1706 1768624 1769091 + hypothetical protein manually curated~KEGG: aav:Aave_2360 hypothetical protein gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1706 Alide_1707 Alide_1707 Alide_1707 1769104 1769496 - Uncharacterized protein family UPF0150 PFAM: Uncharacterised protein family UPF0150~KEGG: bpa:BPP2077 hypothetical protein gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1707 Alide_1708 Alide_1708 Alide_1708 1769524 1769706 - YcfA family protein PFAM: YcfA family protein~KEGG: bpa:BPP2078 hypothetical protein gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1708 Alide_1709 Alide_1709 Alide_1709 1769798 1770088 + hypothetical protein KEGG: dac:Daci_1655 hypothetical protein gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1709 Alide_1710 Alide_1710 Alide_1710 1770085 1770345 + hypothetical protein KEGG: dac:Daci_1656 hypothetical protein gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1710 Alide_1711 Alide_1711 Alide_1711 1771237 1771473 - hypothetical protein KEGG: vei:Veis_5041 hypothetical protein gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1711 Alide_1712 Alide_1712 Alide_1712 1771476 1771712 - hypothetical protein KEGG: saq:Sare_4718 pantoate--beta-alanine ligase gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1712 Alide_1713 Alide_1713 Alide_1713 1771805 1772131 - pseudogene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1713 Alide_1714 Alide_1714 Alide_1714 1773128 1773946 - pseudogene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1714 Alide_1715 Alide_1715 Alide_1715 1774166 1775152 + transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: ajs:Ajs_3395 transposase%2C IS4 family protein gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1715 Alide_1716 Alide_1716 Alide_1716 1775283 1775474 + pseudogene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1716 Alide_1717 Alide_1717 Alide_1717 1775921 1776865 + hypothetical protein KEGG: mea:Mex_2p0814 hypothetical protein gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1717 Alide_1718 Alide_1718 Alide_1718 1777672 1778493 - IstB domain protein ATP-binding protein KEGG: mpt:Mpe_A2996 putative transposase~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1718 Alide_1719 Alide_1719 Alide_1719 1778490 1780001 - Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: bvi:Bcep1808_6160 integrase catalytic subunit gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1719 Alide_1720 Alide_1720 Alide_1720 1780095 1781576 - hypothetical protein KEGG: mms:mma_3457 hypothetical protein gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1720 Alide_1721 Alide_1721 Alide_1721 1781573 1782496 - hypothetical protein KEGG: lch:Lcho_3476 hypothetical protein gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1721 Alide_1722 Alide_1722 Alide_1722 1782579 1782818 - hypothetical protein manually curated~KEGG: ajs:Ajs_3336 hypothetical protein gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1722 Alide_1723 Alide_1723 Alide_1723 1782983 1783840 - hypothetical protein KEGG: lch:Lcho_3471 hypothetical protein gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1723 Alide_1724 Alide_1724 Alide_1724 1784162 1785499 - integrase family protein KEGG: ajs:Ajs_3340 phage integrase family protein~manually curated~PFAM: integrase family protein gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1724 Alide_1725 Alide_1725 Alide_1725 1785915 1786970 + ABC-type nitrate/sulfonate/bicarbonate transporter periplasmic ligand binding subunit KEGG: aav:Aave_2648 putative signal peptide protein gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1725 Alide_1726 Alide_1726 Alide_1726 1787069 1787221 + hypothetical protein KEGG: dia:Dtpsy_1977 hypothetical protein gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1726 Alide_1727 Alide_1727 Alide_1727 1787239 1788753 - Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic%3B MLTD_N domain protein%3B Peptidoglycan-binding lysin domain~KEGG: ajs:Ajs_1742 lytic transglycosylase%2C catalytic gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1727 Alide_1728 Alide_1728 Alide_1728 1788750 1789520 - hydroxyacylglutathione hydrolase TIGRFAM: hydroxyacylglutathione hydrolase~KEGG: dia:Dtpsy_1975 hydroxyacylglutathione hydrolase gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1728 Alide_1729 Alide_1729 Alide_1729 1789525 1790307 + Methyltransferase type 11 PFAM: Methyltransferase type 11~KEGG: ajs:Ajs_1744 methyltransferase type 11 gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1729 Alide_1730 Alide_1730 Alide_1730 1790353 1790799 + ribonuclease H PFAM: ribonuclease H~KEGG: dia:Dtpsy_1973 ribonuclease H gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1730 Alide_1731 Alide_1731 Alide_1731 1790902 1792119 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: rso:RSp1232 aspartate aminotransferase A protein gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1731 Alide_1732 Alide_1732 Alide_1732 1792116 1792748 - Dimethylmenaquinone methyltransferase PFAM: Dimethylmenaquinone methyltransferase~KEGG: app:CAP2UW1_2989 dimethylmenaquinone methyltransferase gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1732 Alide_1733 Alide_1733 Alide_1733 1792754 1793428 - Dimethylmenaquinone methyltransferase PFAM: Dimethylmenaquinone methyltransferase~KEGG: app:CAP2UW1_2990 dimethylmenaquinone methyltransferase gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1733 Alide_1734 Alide_1734 Alide_1734 1793567 1794493 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: rso:RS03179 transcription regulator protein gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1734 Alide_1735 Alide_1735 Alide_1735 1794647 1795549 + extracellular solute-binding protein family 3 KEGG: aav:Aave_4073 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3 gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1735 Alide_1736 Alide_1736 Alide_1736 1795585 1796262 + Dimethylmenaquinone methyltransferase PFAM: Dimethylmenaquinone methyltransferase~KEGG: rsl:RPSI07_mp1263 putative dimethylmenaquinone methyltransferase%3B protein gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1736 Alide_1737 Alide_1737 Alide_1737 1796342 1797319 + tricarboxylate binding receptor KEGG: mms:mma_2446 tricarboxylate binding receptor gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1737 Alide_1738 Alide_1738 Alide_1738 1797306 1797701 - hypothetical protein KEGG: dac:Daci_4475 hypothetical protein gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1738 Alide_1739 Alide_1739 Alide_1739 1797698 1798024 - Thioredoxin domain-containing protein PFAM: Thioredoxin domain-containing protein~KEGG: dia:Dtpsy_1972 thioredoxin domain protein gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1739 Alide_1740 Alide_1740 Alide_1740 1798026 1799384 - molybdenum cofactor synthesis domain protein KEGG: dia:Dtpsy_1971 molybdenum cofactor synthesis domain protein~TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: molybdopterin binding domain%3B MoeA domain protein domain I and II%3B MoeA domain protein domain IV gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1740 Alide_1741 Alide_1741 Alide_1741 1799371 1799946 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: aav:Aave_2657 GCN5-related N-acetyltransferase gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1741 Alide_1742 Alide_1742 Alide_1742 1799943 1800575 - molybdopterin-guanine dinucleotide biosynthesis protein A TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A~KEGG: dia:Dtpsy_1970 molybdopterin-guanine dinucleotide biosynthesis protein MobA gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1742 Alide_1743 Alide_1743 Alide_1743 1800579 1801748 - molybdenum cofactor biosynthesis protein A TIGRFAM: molybdenum cofactor biosynthesis protein A~PFAM: molybdenum cofactor synthesis domain protein%3B Radical SAM domain protein~KEGG: dia:Dtpsy_1969 molybdenum cofactor biosynthesis protein A~SMART: Elongator protein 3/MiaB/NifB gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1743 Alide_1744 Alide_1744 Alide_1744 1801840 1802718 + hypothetical protein KEGG: ajs:Ajs_1750 hypothetical protein gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1744 Alide_1745 Alide_1745 Alide_1745 1802777 1803334 - hypothetical protein KEGG: ajs:Ajs_1755 hypothetical protein gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1745 Alide_1746 Alide_1746 Alide_1746 1803344 1804777 - Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: dia:Dtpsy_1966 aldehyde dehydrogenase gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1746 Alide_1747 Alide_1747 Alide_1747 1804942 1807023 - V-type H(+)-translocating pyrophosphatase TIGRFAM: V-type H(+)-translocating pyrophosphatase~KEGG: dia:Dtpsy_1965 membrane-bound proton-translocating pyrophosphatase~PFAM: Inorganic H pyrophosphatase gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1747 Alide_1748 Alide_1748 Alide_1748 1807238 1807771 + Inorganic diphosphatase KEGG: dia:Dtpsy_1964 inorganic diphosphatase~PFAM: Inorganic pyrophosphatase gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1748 Alide_1749 Alide_1749 Alide_1749 1807973 1808479 + CheW domain protein KEGG: ajs:Ajs_1759 putative CheW protein~PFAM: CheW domain protein~SMART: CheW domain protein gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1749 Alide_1750 Alide_1750 Alide_1750 1808492 1810249 + chemotaxis sensory transducer KEGG: ajs:Ajs_0364 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1750 Alide_1751 Alide_1751 Alide_1751 1810246 1811469 - protein of unknown function DUF482 PFAM: protein of unknown function DUF482~KEGG: vei:Veis_1736 hypothetical protein gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1751 Alide_1752 Alide_1752 Alide_1752 1811501 1811734 - pseudogene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1752 Alide_1753 Alide_1753 Alide_1753 1811765 1813423 + NAD+ synthetase KEGG: vei:Veis_1737 NAD+ synthetase~TIGRFAM: NAD+ synthetase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1753 Alide_1754 Alide_1754 Alide_1754 1813474 1813812 + nitrogen regulatory protein P-II PFAM: nitrogen regulatory protein P-II~KEGG: dia:Dtpsy_1960 nitrogen regulatory protein P-II gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1754 Alide_1755 Alide_1755 Alide_1755 1813822 1814415 - Conserved hypothetical protein CHP00730 PFAM: Conserved hypothetical protein CHP00730~KEGG: dia:Dtpsy_1959 hypothetical protein gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1755 Alide_1756 Alide_1756 Alide_1756 1814408 1814806 - diacylglycerol kinase PFAM: diacylglycerol kinase~KEGG: dia:Dtpsy_1958 diacylglycerol kinase gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1756 Alide_1757 Alide_1757 Alide_1757 1814869 1815441 - RDD domain containing protein PFAM: RDD domain containing protein~KEGG: ajs:Ajs_1765 RDD domain-containing protein gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1757 Alide_1758 Alide_1758 Alide_1758 1815469 1816293 - putative transmembrane protein KEGG: ajs:Ajs_1766 putative transmembrane protein gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1758 Alide_1759 Alide_1759 Alide_1759 1816317 1816778 - putative transmembrane protein KEGG: dia:Dtpsy_1955 putative transmembrane protein gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1759 Alide_1760 Alide_1760 Alide_1760 1816775 1817344 - RNA polymerase sigma factor%2C sigma-70 family KEGG: dia:Dtpsy_1954 RNA polymerase factor sigma-70~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2 gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1760 Alide_1761 Alide_1761 Alide_1761 1817633 1819426 + acetolactate synthase%2C large subunit%2C biosynthetic type KEGG: ajs:Ajs_1769 acetolactate synthase 3 catalytic subunit~TIGRFAM: acetolactate synthase%2C large subunit%2C biosynthetic type~PFAM: thiamine pyrophosphate TPP-binding domain-containing protein%3B thiamine pyrophosphate central domain-containing protein gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1761 Alide_1762 Alide_1762 Alide_1762 1819614 1820105 + acetolactate synthase%2C small subunit KEGG: ctt:CtCNB1_1659 acetolactate synthase%2C small subunit~TIGRFAM: acetolactate synthase%2C small subunit~PFAM: Acetolactate synthase%2C small subunit-like%3B amino acid-binding ACT domain protein gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1762 Alide_1763 Alide_1763 Alide_1763 1820174 1821190 + ketol-acid reductoisomerase TIGRFAM: ketol-acid reductoisomerase~KEGG: dia:Dtpsy_1951 ketol-acid reductoisomerase~PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein%3B acetohydroxy acid isomeroreductase gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1763 Alide_1764 Alide_1764 Alide_1764 1821368 1822204 + CDP-diacylglycerol/serine O-phosphatidyltransferase KEGG: vei:Veis_1753 CDP-diacylglycerol--serine O-phosphatidyltransferase~TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1764 Alide_1765 Alide_1765 Alide_1765 1822229 1822897 - maleylacetoacetate isomerase KEGG: tmz:Tmz1t_0854 maleylacetoacetate isomerase~TIGRFAM: maleylacetoacetate isomerase~PFAM: Glutathione S-transferase domain gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1765 Alide_1766 Alide_1766 Alide_1766 1822908 1823921 - fumarylacetoacetate (FAA) hydrolase PFAM: fumarylacetoacetate (FAA) hydrolase~KEGG: tmz:Tmz1t_0853 fumarylacetoacetate (FAA) hydrolase gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1766 Alide_1767 Alide_1767 Alide_1767 1823997 1825370 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: hse:Hsero_1116 4-hydroxybenzoate transporter transmembrane protein gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1767 Alide_1768 Alide_1768 Alide_1768 1825399 1825953 - Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: azo:azo3679 glyoxalase-family protein gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1768 Alide_1769 Alide_1769 Alide_1769 1826086 1826994 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: pol:Bpro_3346 LysR family transcriptional regulator gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1769 Alide_1770 Alide_1770 Alide_1770 1827202 1828869 + 2-isopropylmalate synthase TIGRFAM: 2-isopropylmalate synthase~KEGG: dia:Dtpsy_1949 2-isopropylmalate synthase~PFAM: pyruvate carboxyltransferase%3B LeuA allosteric (dimerisation) domain-containing protein gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1770 Alide_1771 Alide_1771 Alide_1771 1828905 1830446 + 2-isopropylmalate synthase KEGG: ajs:Ajs_1774 2-isopropylmalate synthase~TIGRFAM: 2-isopropylmalate synthase~PFAM: pyruvate carboxyltransferase%3B LeuA allosteric (dimerisation) domain-containing protein gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1771 Alide_1772 Alide_1772 Alide_1772 1830562 1831656 + peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1~KEGG: ajs:Ajs_1775 murein-dd-endopeptidase gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1772 Alide_1773 Alide_1773 Alide_1773 1831694 1832506 - Transcriptional regulator IclR KEGG: dia:Dtpsy_1946 transcriptional regulator%2C IclR family~PFAM: Transcriptional regulator IclR %3B regulatory protein IclR~SMART: regulatory protein IclR gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1773 Alide_1774 Alide_1774 Alide_1774 1832590 1834092 - sodium/proline symporter KEGG: dac:Daci_5942 sodium/proline symporter~TIGRFAM: sodium/proline symporter%3B SSS sodium solute transporter superfamily~PFAM: Na+/solute symporter gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1774 Alide_1775 Alide_1775 Alide_1775 1834295 1838290 - delta-1-pyrroline-5-carboxylate dehydrogenase KEGG: dac:Daci_5941 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase~TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase~PFAM: Proline dehydrogenase%3B Aldehyde Dehydrogenase gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1775 Alide_1776 Alide_1776 Alide_1776 1838436 1839677 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: dia:Dtpsy_1945 acyl-CoA dehydrogenase domain protein gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1776 Alide_1777 Alide_1777 Alide_1777 1839693 1840784 - aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: ajs:Ajs_1778 aminoglycoside phosphotransferase gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1777 Alide_1778 Alide_1778 Alide_1778 1840841 1841560 - cyclic nucleotide-binding protein KEGG: ajs:Ajs_1779 Crp/FNR family transcriptional regulator~PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding%3B regulatory protein Crp gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1778 Alide_1779 Alide_1779 Alide_1779 1841750 1842529 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: dia:Dtpsy_1942 enoyl-CoA hydratase/isomerase gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1779 Alide_1780 Alide_1780 Alide_1780 1842540 1844060 - 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B 3-hydroxyacyl-CoA dehydrogenase domain-containing protein~KEGG: dia:Dtpsy_1941 3-hydroxy-acyl-CoA dehydrogenase gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1780 Alide_1781 Alide_1781 Alide_1781 1844138 1846156 + hypothetical protein KEGG: dia:Dtpsy_1940 hypothetical protein gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1781 Alide_1782 Alide_1782 Alide_1782 1846167 1847069 - Thiamine-phosphate diphosphorylase KEGG: dia:Dtpsy_1939 thiamine-phosphate pyrophosphorylase~PFAM: thiamine monophosphate synthase gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1782 Alide_1783 Alide_1783 Alide_1783 1847070 1847873 - thiazole biosynthesis family protein PFAM: thiazole biosynthesis family protein~KEGG: dia:Dtpsy_1938 thiazole synthase gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1783 Alide_1784 Alide_1784 Alide_1784 1847889 1848086 - thiamine biosynthesis protein ThiS KEGG: dia:Dtpsy_1937 thiamine biosynthesis protein ThiS~TIGRFAM: thiamine biosynthesis protein ThiS~PFAM: thiamineS protein gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1784 Alide_1785 Alide_1785 Alide_1785 1848083 1849201 - glycine oxidase ThiO KEGG: dia:Dtpsy_1936 FAD dependent oxidoreductase~TIGRFAM: glycine oxidase ThiO~PFAM: FAD dependent oxidoreductase gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1785 Alide_1786 Alide_1786 Alide_1786 1849396 1850244 + phosphomethylpyrimidine kinase KEGG: ajs:Ajs_1787 phosphomethylpyrimidine kinase~TIGRFAM: phosphomethylpyrimidine kinase~PFAM: Phosphomethylpyrimidine kinase type-1 gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1786 Alide_1787 Alide_1787 Alide_1787 1850255 1850731 - SH3 type 3 domain protein KEGG: dia:Dtpsy_1934 SH3 type 3 domain protein~PFAM: SH3 type 3 domain protein%3B protein of unknown function DUF1058~SMART: SH3 domain protein gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1787 Alide_1788 Alide_1788 Alide_1788 1850818 1852089 - permease for cytosine/purines uracil thiamine allantoin PFAM: permease for cytosine/purines uracil thiamine allantoin~KEGG: ctt:CtCNB1_2972 cytosine/purines/uracil permease gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1788 Alide_1789 Alide_1789 Alide_1789 1852086 1853132 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: dia:Dtpsy_1933 FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1789 Alide_1790 Alide_1790 Alide_1790 1853147 1853470 - 4Fe-4S ferredoxin iron-sulfur binding domain protein KEGG: dia:Dtpsy_1932 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1790 Alide_1791 Alide_1791 Alide_1791 1853598 1854965 - sulfate adenylyltransferase%2C large subunit TIGRFAM: sulfate adenylyltransferase%2C large subunit~KEGG: dia:Dtpsy_1931 sulfate adenylyltransferase%2C large subunit~PFAM: protein synthesis factor GTP-binding gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1791 Alide_1792 Alide_1792 Alide_1792 1854965 1855921 - Sulfate adenylyltransferase KEGG: aav:Aave_3055 sulfate adenylyltransferase subunit 2~PFAM: phosphoadenosine phosphosulfate reductase gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1792 Alide_1793 Alide_1793 Alide_1793 1855987 1856610 - Phosphoadenylyl-sulfate reductase (thioredoxin) KEGG: ajs:Ajs_1793 phosphoadenylylsulfate reductase (thioredoxin)~PFAM: phosphoadenosine phosphosulfate reductase gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1793 Alide_1794 Alide_1794 Alide_1794 1856607 1857002 - Uncharacterized conserved protein UCP030820 PFAM: Uncharacterised conserved protein UCP030820~KEGG: dia:Dtpsy_1928 hypothetical protein gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1794 Alide_1795 Alide_1795 Alide_1795 1857032 1858819 - nitrite and sulphite reductase 4Fe-4S region protein PFAM: nitrite and sulphite reductase 4Fe-4S region%3B nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein~KEGG: dia:Dtpsy_1927 nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1795 Alide_1796 Alide_1796 Alide_1796 1858846 1859649 - protein of unknown function DUF81 PFAM: protein of unknown function DUF81~KEGG: aav:Aave_3052 hypothetical protein gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1796 Alide_1797 Alide_1797 Alide_1797 1859759 1861642 - tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC KEGG: dac:Daci_4644 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC~TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC~PFAM: FAD dependent oxidoreductase%3B protein of unknown function DUF752 gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1797 Alide_1798 Alide_1798 Alide_1798 1861639 1862304 - Uncharacterized protein family UPF0126 PFAM: Uncharacterised protein family UPF0126~KEGG: dia:Dtpsy_1925 protein of unknown function UPF0126 gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1798 Alide_1799 Alide_1799 Alide_1799 1862376 1862648 - Fe(II) trafficking protein YggX PFAM: Fe(II) trafficking protein YggX~KEGG: ctt:CtCNB1_3078 Fe(II) trafficking protein YggX gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1799 Alide_1800 Alide_1800 Alide_1800 1862773 1863792 + sulfate ABC transporter%2C periplasmic sulfate-binding protein KEGG: ajs:Ajs_1799 sulfate ABC transporter%2C periplasmic sulfate-binding protein~TIGRFAM: sulfate ABC transporter%2C periplasmic sulfate-binding protein~PFAM: extracellular solute-binding protein family 1 gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1800 Alide_1801 Alide_1801 Alide_1801 1863858 1864178 + hypothetical protein KEGG: rfr:Rfer_1780 NADPH-dependent FMN reductase gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1801 Alide_1802 Alide_1802 Alide_1802 1864175 1864870 - putative TetR family transcriptional regulator KEGG: rme:Rmet_3794 putative TetR family transcriptional regulator gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1802 Alide_1803 Alide_1803 Alide_1803 1864935 1865072 + hypothetical protein gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1803 Alide_1804 Alide_1804 Alide_1804 1865089 1866654 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: azl:AZL_a10790 long-chain fatty-acid-CoA ligase gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1804 Alide_1805 Alide_1805 Alide_1805 1866710 1867897 + Propanoyl-CoA C-acyltransferase KEGG: bxe:Bxe_B2740 lipid-transfer protein~PFAM: Thiolase-like gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1805 Alide_1806 Alide_1806 Alide_1806 1867909 1868718 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: rpb:RPB_4328 short-chain dehydrogenase/reductase SDR gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1806 Alide_1807 Alide_1807 Alide_1807 1868756 1869952 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: bxe:Bxe_C0498 branched chain amino acid ABC transporter periplasmic ligand-binding protein gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1807 Alide_1808 Alide_1808 Alide_1808 1870021 1870878 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: bxe:Bxe_C0499 branched chain amino acid ABC transporter inner membrane protein gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1808 Alide_1809 Alide_1809 Alide_1809 1870875 1871843 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: bxe:Bxe_C0500 branched chain amino acid ABC transporter inner membrane protein gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1809 Alide_1810 Alide_1810 Alide_1810 1871840 1872592 + ABC transporter related protein KEGG: bxe:Bxe_C0501 branched chain amino acid ABC transporter ATPase~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1810 Alide_1811 Alide_1811 Alide_1811 1872589 1873296 + ABC transporter related protein KEGG: bxe:Bxe_C0502 branched chain amino acid ABC transporter ATPase~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1811 Alide_1812 Alide_1812 Alide_1812 1873340 1873933 + Carboxymuconolactone decarboxylase PFAM: Carboxymuconolactone decarboxylase~KEGG: pat:Patl_3926 carboxymuconolactone decarboxylase gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1812 Alide_1813 Alide_1813 Alide_1813 1873970 1875571 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: tfu:Tfu_1300 DitJ-like CoA ligase gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1813 Alide_1814 Alide_1814 Alide_1814 1875587 1876420 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: ctt:CtCNB1_1711 short-chain dehydrogenase/reductase SDR gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1814 Alide_1815 Alide_1815 Alide_1815 1876466 1876635 + pseudogene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1815 Alide_1816 Alide_1816 Alide_1816 1876852 1877952 + pseudogene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1816 Alide_1817 Alide_1817 Alide_1817 1877949 1879087 + pseudogene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1817 Alide_1818 Alide_1818 Alide_1818 1879156 1880035 + pseudogene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1818 Alide_1819 Alide_1819 Alide_1819 1880081 1881058 - Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic%3B Sel1 domain protein repeat-containing protein~KEGG: rfr:Rfer_0483 lytic transglycosylase%2C catalytic gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1819 Alide_1820 Alide_1820 Alide_1820 1881411 1882130 + P4 family integrase KEGG: ecc:c1165 P4 family integrase gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1820 Alide_1821 Alide_1821 Alide_1821 1882161 1882484 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1821 Alide_1822 Alide_1822 Alide_1822 1882481 1883395 + Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_0907 integrase catalytic subunit gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1822 Alide_1823 Alide_1823 Alide_1823 1883501 1883893 + hypothetical protein KEGG: ajs:Ajs_2230 hypothetical protein gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1823 Alide_1824 Alide_1824 Alide_1824 1884144 1884860 + hypothetical protein KEGG: ajs:Ajs_2229 hypothetical protein gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1824 Alide_1825 Alide_1825 Alide_1825 1885152 1885949 + hypothetical protein KEGG: rpf:Rpic12D_0659 hypothetical protein gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1825 Alide_1826 Alide_1826 Alide_1826 1886172 1887860 - mercuric reductase KEGG: ajs:Ajs_1298 putative mercuric reductase~TIGRFAM: mercuric reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B Heavy metal transport/detoxification protein%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1826 Alide_1827 Alide_1827 Alide_1827 1887871 1888149 - mercuric transport protein periplasmic component KEGG: ajs:Ajs_1299 mercuric transport protein periplasmic component~TIGRFAM: mercuric transport protein periplasmic component~PFAM: Heavy metal transport/detoxification protein gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1827 Alide_1828 Alide_1828 Alide_1828 1888160 1888510 - Mercuric transport protein MerT PFAM: Mercuric transport protein MerT~KEGG: ajs:Ajs_1300 putative mercuric transport protein gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1828 Alide_1829 Alide_1829 Alide_1829 1888582 1888989 + Hg(II)-responsive transcriptional regulator TIGRFAM: Hg(II)-responsive transcriptional regulator~PFAM: Transcription regulator MerR DNA binding%3B regulatory protein MerR~KEGG: ajs:Ajs_1301 MerR family transcriptional regulator~SMART: regulatory protein MerR gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1829 Alide_1830 Alide_1830 Alide_1830 1889304 1889855 + hypothetical protein KEGG: mpt:Mpe_A2362 hypothetical protein gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1830 Alide_1831 Alide_1831 Alide_1831 1889911 1890522 + hypothetical protein KEGG: mpt:Mpe_A2363 hypothetical protein gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1831 Alide_1832 Alide_1832 Alide_1832 1890612 1890977 + hypothetical protein KEGG: mpt:Mpe_A2364 hypothetical protein gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1832 Alide_1833 Alide_1833 Alide_1833 1891062 1891712 + hypothetical protein KEGG: tmz:Tmz1t_0975 hypothetical protein gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1833 Alide_1834 Alide_1834 Alide_1834 1891777 1892886 + hypothetical protein KEGG: tmz:Tmz1t_0974 hypothetical protein gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1834 Alide_1835 Alide_1835 Alide_1835 1892988 1893293 + hypothetical protein KEGG: mpt:Mpe_A2367 hypothetical protein gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1835 Alide_1836 Alide_1836 Alide_1836 1893393 1894577 + helicase domain-containing protein KEGG: ajs:Ajs_2220 helicase domain-containing protein gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1836 Alide_1837 Alide_1837 Alide_1837 1894569 1895483 - Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_0907 integrase catalytic subunit gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1837 Alide_1838 Alide_1838 Alide_1838 1895480 1895803 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1838 Alide_1839 Alide_1839 Alide_1839 1895846 1896214 + pseudogene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1839 Alide_1840 Alide_1840 Alide_1840 1896262 1898115 - integrase family protein PFAM: integrase family protein~KEGG: mpt:Mpe_A2408 integrase (int) gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1840 Alide_1841 Alide_1841 Alide_1841 1898544 1899086 - transcriptional regulator%2C Rrf2 family KEGG: ajs:Ajs_1664 BadM/Rrf2 family transcriptional regulator~TIGRFAM: transcriptional regulator%2C Rrf2 family~PFAM: protein of unknown function UPF0074 gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1841 Alide_1842 Alide_1842 Alide_1842 1899248 1899631 - hypothetical protein manually curated~KEGG: dia:Dtpsy_2039 hypothetical protein gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1842 Alide_1843 Alide_1843 Alide_1843 1899705 1899965 + hypothetical protein KEGG: dia:Dtpsy_2037 hypothetical protein gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1843 Alide_1844 Alide_1844 Alide_1844 1899977 1900852 - phosphatidylserine decarboxylase KEGG: dia:Dtpsy_2036 phosphatidylserine decarboxylase~TIGRFAM: phosphatidylserine decarboxylase~PFAM: phosphatidylserine decarboxylase-related gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1844 Alide_1845 Alide_1845 Alide_1845 1901079 1902230 + CBS domain containing protein manually curated~PFAM: CBS domain containing protein%3B HPP family protein~KEGG: ajs:Ajs_1669 CBS domain-containing protein~SMART: CBS domain containing protein gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1845 Alide_1846 Alide_1846 Alide_1846 1902478 1902738 + translation initiation factor IF-1 KEGG: dia:Dtpsy_2034 translation initiation factor IF-1~TIGRFAM: translation initiation factor IF-1~PFAM: S1 IF1 family protein gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1846 Alide_1847 Alide_1847 Alide_1847 1903109 1904158 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~KEGG: ajs:Ajs_4119 diguanylate cyclase~SMART: GGDEF domain containing protein gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1847 Alide_1848 Alide_1848 Alide_1848 1904164 1904937 + protein of unknown function DUF1624 PFAM: protein of unknown function DUF1624~KEGG: ajs:Ajs_1672 hypothetical protein gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1848 Alide_1849 Alide_1849 Alide_1849 1904949 1905251 - integration host factor%2C beta subunit TIGRFAM: integration host factor%2C beta subunit~PFAM: histone family protein DNA-binding protein~KEGG: dia:Dtpsy_1390 integration host factor%2C beta subunit~SMART: histone family protein DNA-binding protein gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1849 Alide_1850 Alide_1850 Alide_1850 1905372 1907057 - ribosomal protein S1 KEGG: dia:Dtpsy_1391 30S ribosomal protein S1~TIGRFAM: ribosomal protein S1~PFAM: RNA binding S1 domain protein gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1850 Alide_1851 Alide_1851 Alide_1851 1907238 1909262 - 3-phosphoshikimate 1-carboxyvinyltransferase TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase%3B cytidylate kinase~KEGG: dia:Dtpsy_1392 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)%3B cytidylate kinase region gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1851 Alide_1852 Alide_1852 Alide_1852 1909262 1910146 - Prephenate dehydrogenase KEGG: dia:Dtpsy_1393 prephenate dehydrogenase~PFAM: Prephenate dehydrogenase gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1852 Alide_1853 Alide_1853 Alide_1853 1910157 1911257 - chorismate mutase KEGG: dia:Dtpsy_1394 chorismate mutase~TIGRFAM: chorismate mutase~PFAM: prephenate dehydratase%3B Chorismate mutase%2C type II%3B amino acid-binding ACT domain protein gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1853 Alide_1854 Alide_1854 Alide_1854 1911376 1912485 - phosphoserine aminotransferase TIGRFAM: phosphoserine aminotransferase~KEGG: dia:Dtpsy_1395 phosphoserine aminotransferase~PFAM: aminotransferase class V gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1854 Alide_1855 Alide_1855 Alide_1855 1912552 1915242 - DNA gyrase%2C A subunit SMART: DNA gyrase/topoisomerase IV subunit A~TIGRFAM: DNA gyrase%2C A subunit~KEGG: ajs:Ajs_2464 DNA gyrase subunit A~PFAM: DNA gyrase/topoisomerase IV subunit A%3B DNA gyrase repeat beta-propeller gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1855 Alide_1856 Alide_1856 Alide_1856 1915356 1916078 + OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: dia:Dtpsy_1397 OmpA/MotB domain protein gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1856 Alide_1857 Alide_1857 Alide_1857 1916158 1916871 + ubiquinone biosynthesis O-methyltransferase TIGRFAM: ubiquinone biosynthesis O-methyltransferase~KEGG: dia:Dtpsy_1398 3-demethylubiquinone-9 3-methyltransferase~PFAM: Methyltransferase type 11 gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1857 Alide_1858 Alide_1858 Alide_1858 1916868 1917545 + phosphoglycolate phosphatase KEGG: ajs:Ajs_2461 phosphoglycolate phosphatase~TIGRFAM: phosphoglycolate phosphatase%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 1%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1858 Alide_1859 Alide_1859 Alide_1859 1918163 1918834 - protein of unknown function DUF159 PFAM: protein of unknown function DUF159~KEGG: tin:Tint_2914 protein of unknown function DUF159 gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1859 Alide_1860 Alide_1860 Alide_1860 1918890 1919375 + Peptidase S24/S26A/S26B%2C conserved region protein PFAM: Peptidase S24/S26A/S26B%2C conserved region~KEGG: tin:Tint_2913 peptidase S24/S26A/S26B%2C conserved region gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1860 Alide_1861 Alide_1861 Alide_1861 1919375 1920661 + DNA-directed DNA polymerase KEGG: tin:Tint_2912 DNA-directed DNA polymerase~PFAM: UMUC domain protein DNA-repair protein gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1861 Alide_1862 Alide_1862 Alide_1862 1920658 1921122 - hypothetical protein KEGG: mca:MCA2632 hypothetical protein gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1862 Alide_1863 Alide_1863 Alide_1863 1921119 1921505 - prophage LambdaMc01%2C site-specific recombinase resolvase family protein%2C truncation KEGG: mca:MCA2633 prophage LambdaMc01%2C site-specific recombinase resolvase family protein%2C truncation gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1863 Alide_1864 Alide_1864 Alide_1864 1921502 1922881 - Resolvase domain protein PFAM: Resolvase domain%3B Recombinase~KEGG: mca:MCA2634 prophage LambdaMc01%2C site-specific recombinase resolvase family protein gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1864 Alide_1865 Alide_1865 Alide_1865 1922881 1923327 - hypothetical protein KEGG: mca:MCA2635 hypothetical protein gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1865 Alide_1866 Alide_1866 Alide_1866 1923324 1923518 - hypothetical protein KEGG: mca:MCA2636 hypothetical protein gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1866 Alide_1867 Alide_1867 Alide_1867 1923698 1923976 + helix-turn-helix domain protein KEGG: sml:Smlt1898 putative HTH transcriptional regulator~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1867 Alide_1868 Alide_1868 Alide_1868 1923977 1924240 + hypothetical protein KEGG: nde:NIDE0076 hypothetical protein gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1868 Alide_1869 Alide_1869 Alide_1869 1924725 1926704 - 5-oxoprolinase (ATP-hydrolyzing) KEGG: ara:Arad_14159 hydantoin utilization protein B~PFAM: Hydantoinase B/oxoprolinase gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1869 Alide_1870 Alide_1870 Alide_1870 1926708 1931224 - pseudogene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1870 Alide_1871 Alide_1871 Alide_1871 1927947 1928375 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rfr:Rfer_2709 transposase IS3/IS911 gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1871 Alide_1872 Alide_1872 Alide_1872 1928372 1928704 + IS66 Orf2 family protein PFAM: IS66 Orf2 family protein~KEGG: rfr:Rfer_2710 IS66 Orf2 like gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1872 Alide_1873 Alide_1873 Alide_1873 1928787 1930301 + transposase IS66 KEGG: dia:Dtpsy_2523 transposase IS66 gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1873 Alide_1874 Alide_1874 Alide_1874 1931238 1932152 - Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_0907 integrase catalytic subunit gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1874 Alide_1875 Alide_1875 Alide_1875 1932149 1932472 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1875 Alide_1876 Alide_1876 Alide_1876 1932516 1932785 - pseudogene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1876 Alide_1877 Alide_1877 Alide_1877 1932782 1933078 - putative sarcosine oxidase alpha subunit manually curated~KEGG: pol:Bpro_4342 putative sarcosine oxidase alpha subunit gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1877 Alide_1878 Alide_1878 Alide_1878 1933026 1934186 - FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: pol:Bpro_4343 FAD dependent oxidoreductase gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1878 Alide_1879 Alide_1879 Alide_1879 1934534 1935460 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: pol:Bpro_4348 LysR family transcriptional regulator gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1879 Alide_1880 Alide_1880 Alide_1880 1935751 1936677 - Glutaminase%2C core TIGRFAM: Glutaminase%2C core~KEGG: thermolabile glutaminase (glutaminase A)~PFAM: Glutaminase%2C core gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1880 Alide_1881 Alide_1881 Alide_1881 1936681 1937868 - amidohydrolase TIGRFAM: amidohydrolase~KEGG: pol:Bpro_4523 peptidase M20D%2C amidohydrolase~PFAM: peptidase M20%3B peptidase dimerisation domain protein gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1881 Alide_1882 Alide_1882 Alide_1882 1937906 1939246 - major facilitator protein family permease KEGG: rme:Rmet_5758 major facilitator protein family permease gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1882 Alide_1883 Alide_1883 Alide_1883 1939373 1940275 + regulatory protein LysR PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: pol:Bpro_4525 LysR family transcriptional regulator gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1883 Alide_1884 Alide_1884 Alide_1884 1940344 1941141 - hypothetical protein KEGG: sde:Sde_2785 hypothetical protein gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1884 Alide_1885 Alide_1885 Alide_1885 1941276 1941770 - acetyltransferase%2C GNAT family manually curated~KEGG: afr:AFE_1417 acetyltransferase%2C GNAT family gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1885 Alide_1886 Alide_1886 Alide_1886 1941767 1942033 - protein of unknown function DUF1778 PFAM: protein of unknown function DUF1778~KEGG: afr:AFE_1418 hypothetical protein gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1886 Alide_1887 Alide_1887 Alide_1887 1942264 1943520 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ajs:Ajs_1692 major facilitator superfamily transporter gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1887 Alide_1888 Alide_1888 Alide_1888 1943704 1944495 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_2008 gluconate 5-dehydrogenase gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1888 Alide_1889 Alide_1889 Alide_1889 1944559 1944984 + thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: ajs:Ajs_1696 hypothetical protein gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1889 Alide_1890 Alide_1890 Alide_1890 1945078 1946094 + Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein~KEGG: ajs:Ajs_1697 alcohol dehydrogenase gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1890 Alide_1891 Alide_1891 Alide_1891 1946171 1947094 + putative glutathione S-transferase-related protein KEGG: ajs:Ajs_1699 putative glutathione S-transferase-related protein gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1891 Alide_1892 Alide_1892 Alide_1892 1947174 1947767 - hypothetical protein KEGG: dia:Dtpsy_2002 protein of unknown function DUF1566 gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1892 Alide_1893 Alide_1893 Alide_1893 1948256 1949659 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ajs:Ajs_1703 major facilitator superfamily transporter gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1893 Alide_1894 Alide_1894 Alide_1894 1949659 1951134 + Deoxyribodipyrimidine photo-lyase KEGG: ajs:Ajs_1801 deoxyribodipyrimidine photo-lyase type I~PFAM: DNA photolyase FAD-binding%3B DNA photolyase domain protein gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1894 Alide_1895 Alide_1895 Alide_1895 1951139 1951705 - hypothetical protein KEGG: ajs:Ajs_1629 hypothetical protein gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1895 Alide_1896 Alide_1896 Alide_1896 1951686 1954046 - 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase~KEGG: ajs:Ajs_1630 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase~PFAM: Methionine synthase vitamin-B12 independent%3B Cobalamin-independent synthase MetE domain protein gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1896 Alide_1897 Alide_1897 Alide_1897 1954155 1955081 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ajs:Ajs_1631 LysR family transcriptional regulator gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1897 Alide_1898 Alide_1898 Alide_1898 1955197 1955364 + hypothetical protein KEGG: dac:Daci_3074 hypothetical protein gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1898 Alide_1899 Alide_1899 Alide_1899 1955380 1957371 + pseudogene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1899 Alide_1900 Alide_1900 Alide_1900 1957390 1957911 - hypothetical protein KEGG: dac:Daci_0667 hypothetical protein gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1900 Alide_1901 Alide_1901 Alide_1901 1958018 1958878 - isocitrate lyase and phosphorylmutase PFAM: isocitrate lyase and phosphorylmutase~KEGG: dac:Daci_3579 PEP phosphonomutase gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1901 Alide_1902 Alide_1902 Alide_1902 1959040 1960203 - AcnD-accessory protein PrpF KEGG: dac:Daci_3586 AcnD-accessory protein PrpF~TIGRFAM: AcnD-accessory protein PrpF~PFAM: protein of unknown function DUF453 gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1902 Alide_1903 Alide_1903 Alide_1903 1960207 1962834 - 2-methylisocitrate dehydratase%2C Fe/S-dependent KEGG: dia:Dtpsy_2080 aconitate hydratase~TIGRFAM: 2-methylisocitrate dehydratase%2C Fe/S-dependent~PFAM: aconitate hydratase domain-containing protein gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1903 Alide_1904 Alide_1904 Alide_1904 1962854 1964014 - 2-methylcitrate synthase/citrate synthase II TIGRFAM: 2-methylcitrate synthase/citrate synthase II~KEGG: ajs:Ajs_1635 methylcitrate synthase~PFAM: Citrate synthase gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1904 Alide_1905 Alide_1905 Alide_1905 1964011 1964406 - thioesterase superfamily protein KEGG: dia:Dtpsy_2078 thioesterase superfamily protein~manually curated~PFAM: thioesterase superfamily protein gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1905 Alide_1906 Alide_1906 Alide_1906 1964509 1965969 + Protein of unknown function DUF2083%2Ctranscriptional regulator KEGG: ajs:Ajs_1637 XRE family transcriptional regulator~PFAM: Protein of unknown function DUF2083%2Ctranscriptional regulator%3B protein of unknown function DUF955%3B helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1906 Alide_1907 Alide_1907 Alide_1907 1966081 1966989 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: cti:RALTA_B2225 putative transcription regulator%2C LysR family gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1907 Alide_1908 Alide_1908 Alide_1908 1967119 1967502 + Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: cti:RALTA_B2224 putative metallothiol transferase gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1908 Alide_1909 Alide_1909 Alide_1909 1967552 1968619 + hypothetical protein KEGG: hse:Hsero_2301 hypothetical protein gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1909 Alide_1910 Alide_1910 Alide_1910 1968626 1969072 - RNA-binding S4 domain protein KEGG: ajs:Ajs_1639 RNA-binding S4 domain-containing protein~PFAM: RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1910 Alide_1911 Alide_1911 Alide_1911 1969095 1970498 - Two-component sensor kinase domain-containing protein KEGG: dia:Dtpsy_2074 histidine kinase~PFAM: Two-component sensor kinase domain-containing protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1911 Alide_1912 Alide_1912 Alide_1912 1970495 1971178 - response regulator receiver KEGG: ajs:Ajs_1641 two component transcriptional regulator~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1912 Alide_1913 Alide_1913 Alide_1913 1971321 1972280 + hypothetical protein KEGG: dia:Dtpsy_2072 hypothetical protein gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1913 Alide_1914 Alide_1914 Alide_1914 1972417 1972971 + hypothetical protein KEGG: dia:Dtpsy_2071 hypothetical protein gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1914 Alide_1915 Alide_1915 Alide_1915 1972971 1974500 + protein of unknown function DUF112 transmembrane PFAM: protein of unknown function DUF112 transmembrane~KEGG: ajs:Ajs_1644 hypothetical protein gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1915 Alide_1916 Alide_1916 Alide_1916 1974566 1976755 + Hydroxybutyrate-dimer hydrolase KEGG: dia:Dtpsy_2060 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane~PFAM: D-(-)-3-hydroxybutyrate oligomer hydrolase%2C putative gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1916 Alide_1917 Alide_1917 Alide_1917 1977073 1977660 - putative lipoprotein KEGG: ctt:CtCNB1_3704 putative lipoprotein gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1917 Alide_1918 Alide_1918 Alide_1918 1977845 1978012 - hypothetical protein KEGG: dia:Dtpsy_2056 hypothetical protein gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1918 Alide_1919 Alide_1919 Alide_1919 1978026 1979123 - protein of unknown function DUF395 YeeE/YedE PFAM: protein of unknown function DUF395 YeeE/YedE~KEGG: ajs:Ajs_1649 protein of unknown function DUF395%2C YeeE/YedE gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1919 Alide_1920 Alide_1920 Alide_1920 1979218 1980162 - Rhodanese domain protein KEGG: dia:Dtpsy_2054 rhodanese domain protein~PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1920 Alide_1921 Alide_1921 Alide_1921 1980277 1981272 - ferrochelatase TIGRFAM: ferrochelatase~KEGG: ajs:Ajs_1652 ferrochelatase~PFAM: ferrochelatase gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1921 Alide_1922 Alide_1922 Alide_1922 1981291 1982016 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 KEGG: dac:Daci_2563 HAD family hydrolase~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Haloacid dehalogenase domain protein hydrolase gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1922 Alide_1923 Alide_1923 Alide_1923 1981988 1984744 - ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC KEGG: dia:Dtpsy_2050 ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~TIGRFAM: ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B cation transporting ATPase domain protein%3B Haloacid dehalogenase domain protein hydrolase gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1923 Alide_1924 Alide_1924 Alide_1924 1984923 1985729 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: ajs:Ajs_1655 alpha/beta hydrolase fold gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1924 Alide_1925 Alide_1925 Alide_1925 1985729 1987030 - O-acetylhomoserine/O-acetylserine sulfhydrylase KEGG: ajs:Ajs_1656 O-acetylhomoserine aminocarboxypropyltransferase~TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase~PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1925 Alide_1926 Alide_1926 Alide_1926 1987146 1987601 + CBS domain containing protein KEGG: dia:Dtpsy_2047 CBS domain containing protein~PFAM: CBS domain containing protein~SMART: CBS domain containing protein gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1926 Alide_1927 Alide_1927 Alide_1927 1987695 1988789 + chorismate synthase TIGRFAM: chorismate synthase~KEGG: dia:Dtpsy_2046 chorismate synthase~PFAM: chorismate synthase gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1927 Alide_1928 Alide_1928 Alide_1928 1988851 1989300 - ATP-cone domain protein PFAM: ATP-cone domain protein~KEGG: dia:Dtpsy_2045 transcriptional regulator NrdR gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1928 Alide_1929 Alide_1929 Alide_1929 1989326 1990570 - Glycine hydroxymethyltransferase KEGG: dia:Dtpsy_2044 serine hydroxymethyltransferase~PFAM: glycine hydroxymethyltransferase gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1929 Alide_1930 Alide_1930 Alide_1930 1990812 1991624 - Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic~KEGG: dia:Dtpsy_2043 lytic transglycosylase catalytic gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1930 Alide_1931 Alide_1931 Alide_1931 1992342 1996100 + hypothetical protein KEGG: ajs:Ajs_1662 hypothetical protein gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1931 Alide_1932 Alide_1932 Alide_1932 1996324 1998921 + hypothetical protein KEGG: dia:Dtpsy_2041 hypothetical protein gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1932 Alide_1933 Alide_1933 Alide_1933 1999399 2001690 + ribonuclease R SMART: Cold shock protein~manually curated~KEGG: dia:Dtpsy_1240 ribonuclease R~TIGRFAM: ribonuclease R%3B VacB and RNase II family 3'-5' exoribonuclease~PFAM: ribonuclease II%3B Ribonuclease B OB region domain%3B RNA binding S1 domain protein gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1933 Alide_1934 Alide_1934 Alide_1934 2001713 2002468 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_1241 short-chain dehydrogenase/reductase SDR gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1934 Alide_1935 Alide_1935 Alide_1935 2002559 2003209 + cytochrome c553-like protein KEGG: aav:Aave_3388 cytochrome c553-like protein gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1935 Alide_1936 Alide_1936 Alide_1936 2003206 2004495 + Gluconate 2-dehydrogenase (acceptor) KEGG: aav:Aave_3387 cytochrome c%2C class I~PFAM: cytochrome c class I gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1936 Alide_1937 Alide_1937 Alide_1937 2004515 2004898 + Thioredoxin domain-containing protein PFAM: Thioredoxin domain-containing protein~KEGG: dia:Dtpsy_1244 hypothetical protein gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1937 Alide_1938 Alide_1938 Alide_1938 2005099 2005689 + protein of unknown function DUF150 PFAM: protein of unknown function DUF150~KEGG: dia:Dtpsy_1245 hypothetical protein gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1938 Alide_1939 Alide_1939 Alide_1939 2005758 2007242 + transcription termination factor NusA TIGRFAM: transcription termination factor NusA~PFAM: NusA domain-containing protein%3B RNA binding S1 domain protein~KEGG: dia:Dtpsy_1246 NusA antitermination factor~SMART: KH domain protein gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1939 Alide_1940 Alide_1940 Alide_1940 2007267 2010098 + translation initiation factor IF-2 KEGG: dia:Dtpsy_1247 translation initiation factor IF-2~TIGRFAM: translation initiation factor IF-2%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B Initiation factor 2 associated domain protein %3B translation initiation factor IF-2 domain-containing protein%3B elongation factor Tu domain 2 protein gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1940 Alide_1941 Alide_1941 Alide_1941 2010102 2010482 + ribosome-binding factor A KEGG: aav:Aave_3382 ribosome-binding factor A~TIGRFAM: ribosome-binding factor A~PFAM: ribosome-binding factor A gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1941 Alide_1942 Alide_1942 Alide_1942 2010475 2011479 + tRNA pseudouridine synthase B KEGG: ajs:Ajs_2559 tRNA pseudouridine synthase B~TIGRFAM: tRNA pseudouridine synthase B~PFAM: pseudouridylate synthase TruB domain protein gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1942 Alide_1943 Alide_1943 Alide_1943 2011476 2013305 + GTP-binding protein TypA KEGG: ajs:Ajs_2558 GTP-binding protein TypA~TIGRFAM: GTP-binding protein TypA%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor G domain-containing protein gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1943 Alide_1944 Alide_1944 Alide_1944 2013373 2014251 - hypothetical protein KEGG: vap:Vapar_3272 hypothetical protein gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1944 Alide_1945 Alide_1945 Alide_1945 2014585 2015676 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: ajs:Ajs_2556 3-hydroxyisobutyryl-CoA hydrolase gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1945 Alide_1946 Alide_1946 Alide_1946 2015627 2016469 - putative transmembrane anti-sigma factor KEGG: ajs:Ajs_2555 putative transmembrane anti-sigma factor gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1946 Alide_1947 Alide_1947 Alide_1947 2016494 2017018 - RNA polymerase sigma factor%2C sigma-70 family KEGG: dia:Dtpsy_1254 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1947 Alide_1948 Alide_1948 Alide_1948 2017035 2017400 - secreted repeat protein KEGG: dia:Dtpsy_1255 secreted repeat of unknown function gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1948 Alide_1949 Alide_1949 Alide_1949 2017500 2017973 - SsrA-binding protein KEGG: dia:Dtpsy_1256 SsrA-binding protein~TIGRFAM: SsrA-binding protein~PFAM: SmpB protein gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1949 Alide_1950 Alide_1950 Alide_1950 2018120 2018560 + cyclase/dehydrase PFAM: cyclase/dehydrase~KEGG: dia:Dtpsy_1257 cyclase/dehydrase gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1950 Alide_1951 Alide_1951 Alide_1951 2018570 2018896 + protein of unknown function UPF0125 PFAM: protein of unknown function UPF0125~KEGG: ajs:Ajs_2550 hypothetical protein gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1951 Alide_1952 Alide_1952 Alide_1952 2018905 2019408 - hypothetical protein KEGG: ajs:Ajs_2549 hypothetical protein gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1952 Alide_1953 Alide_1953 Alide_1953 2019502 2020977 + inosine-5'-monophosphate dehydrogenase SMART: CBS domain containing protein~TIGRFAM: inosine-5'-monophosphate dehydrogenase~KEGG: dia:Dtpsy_1260 inosine-5'-monophosphate dehydrogenase~PFAM: IMP dehydrogenase/GMP reductase%3B CBS domain containing protein gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1953 Alide_1954 Alide_1954 Alide_1954 2021051 2022667 + GMP synthase%2C large subunit TIGRFAM: GMP synthase%2C large subunit%3B GMP synthase%2C small subunit~KEGG: dac:Daci_3013 GMP synthase~PFAM: GMP synthase domain protein%3B glutamine amidotransferase class-I gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1954 Alide_1955 Alide_1955 Alide_1955 2022969 2023991 + integrase family protein PFAM: integrase family protein~KEGG: bam:Bamb_2021 phage integrase family protein gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1955 Alide_1956 Alide_1956 Alide_1956 2023960 2025255 - citrate synthase I KEGG: dia:Dtpsy_2288 type II citrate synthase~TIGRFAM: citrate synthase I~PFAM: Citrate synthase gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1956 Alide_1957 Alide_1957 Alide_1957 2025302 2025574 - protein of unknown function DUF339 PFAM: protein of unknown function DUF339~KEGG: ajs:Ajs_2797 hypothetical protein gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1957 Alide_1958 Alide_1958 Alide_1958 2025595 2026299 - succinate dehydrogenase and fumarate reductase iron-sulfur protein TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein~KEGG: dac:Daci_2424 succinate dehydrogenase and fumarate reductase iron-sulfur protein~PFAM: ferredoxin gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1958 Alide_1959 Alide_1959 Alide_1959 2026328 2028133 - succinate dehydrogenase%2C flavoprotein subunit KEGG: dia:Dtpsy_2285 succinate dehydrogenase%2C flavoprotein subunit~TIGRFAM: succinate dehydrogenase%2C flavoprotein subunit%3B succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1959 Alide_1960 Alide_1960 Alide_1960 2028184 2028549 - succinate dehydrogenase%2C hydrophobic membrane anchor protein TIGRFAM: succinate dehydrogenase%2C hydrophobic membrane anchor protein~KEGG: aav:Aave_2203 succinate dehydrogenase subunit D gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1960 Alide_1961 Alide_1961 Alide_1961 2028574 2029005 - succinate dehydrogenase%2C cytochrome b556 subunit KEGG: dia:Dtpsy_2283 succinate dehydrogenase%2C cytochrome b556 subunit~TIGRFAM: succinate dehydrogenase%2C cytochrome b556 subunit~PFAM: succinate dehydrogenase cytochrome b subunit gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1961 Alide_1962 Alide_1962 Alide_1962 2029156 2029947 - UbiC transcription regulator-associated domain-containing protein KEGG: dia:Dtpsy_2282 transcriptional regulator%2C GntR family~PFAM: UbiC transcription regulator-associated domain-containing protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1962 Alide_1963 Alide_1963 Alide_1963 2030130 2031116 + malate dehydrogenase KEGG: dia:Dtpsy_2281 malate dehydrogenase~TIGRFAM: malate dehydrogenase~PFAM: Lactate/malate dehydrogenase gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1963 Alide_1964 Alide_1964 Alide_1964 2031129 2031920 + Trans-aconitate 2-methyltransferase KEGG: dac:Daci_2430 trans-aconitate 2-methyltransferase~PFAM: Methyltransferase type 12 gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1964 Alide_1965 Alide_1965 Alide_1965 2032128 2032772 + hypothetical protein KEGG: dia:Dtpsy_2278 hypothetical protein gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1965 Alide_1966 Alide_1966 Alide_1966 2032890 2035481 + aconitate hydratase 2 KEGG: ajs:Ajs_2787 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase~TIGRFAM: aconitate hydratase 2~PFAM: Aconitase B%3B aconitate hydratase domain-containing protein gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1966 Alide_1967 Alide_1967 Alide_1967 2035701 2036594 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ctt:CtCNB1_3364 transcriptional regulator%2C LysR family gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1967 Alide_1968 Alide_1968 Alide_1968 2036701 2038407 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: ctt:CtCNB1_3363 acyl-CoA dehydrogenase-like protein gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1968 Alide_1969 Alide_1969 Alide_1969 2038514 2039506 + conserved hypothetical protein KEGG: ctt:CtCNB1_3361 AccB gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1969 Alide_1970 Alide_1970 Alide_1970 2039513 2040673 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: ctt:CtCNB1_3358 L-carnitine dehydratase/bile acid-inducible gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1970 Alide_1971 Alide_1971 Alide_1971 2040684 2042033 - glutathione-disulfide reductase KEGG: dac:Daci_2356 glutathione-disulfide reductase~TIGRFAM: glutathione-disulfide reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1971 Alide_1972 Alide_1972 Alide_1972 2042201 2042668 + (2Fe-2S)-binding domain-containing protein PFAM: [2Fe-2S]-binding domain-containing protein%3B ferredoxin~KEGG: vei:Veis_4544 2Fe-2S iron-sulfur cluster binding domain-containing protein gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1972 Alide_1973 Alide_1973 Alide_1973 2042702 2045074 + aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding%3B aldehyde oxidase and xanthine dehydrogenase a/b hammerhead~KEGG: vap:Vapar_1594 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1973 Alide_1974 Alide_1974 Alide_1974 2045088 2045879 + Carbon-monoxide dehydrogenase (acceptor) KEGG: pol:Bpro_0576 molybdopterin dehydrogenase%2C FAD-binding~PFAM: molybdopterin dehydrogenase FAD-binding gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1974 Alide_1975 Alide_1975 Alide_1975 2046009 2046923 + ATPase associated with various cellular activities AAA_5 KEGG: dac:Daci_2251 ATPase~PFAM: ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1975 Alide_1976 Alide_1976 Alide_1976 2046926 2048167 + VWA containing CoxE family protein PFAM: VWA containing CoxE family protein~KEGG: vei:Veis_4536 VWA containing CoxE family protein gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1976 Alide_1977 Alide_1977 Alide_1977 2048181 2048732 + carbon monoxide dehydrogenase subunit G PFAM: carbon monoxide dehydrogenase subunit G~KEGG: pol:Bpro_0573 carbon monoxide dehydrogenase subunit G gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1977 Alide_1978 Alide_1978 Alide_1978 2048742 2049782 + protein of unknown function DUF182 PFAM: protein of unknown function DUF182~KEGG: pol:Bpro_0572 hypothetical protein gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1978 Alide_1979 Alide_1979 Alide_1979 2049782 2050429 + molybdenum cofactor cytidylyltransferase KEGG: aeh:Mlg_1568 molybdenum cofactor cytidylyltransferase gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1979 Alide_1980 Alide_1980 Alide_1980 2050437 2051312 - hypothetical protein KEGG: dia:Dtpsy_2274 hypothetical protein gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1980 Alide_1981 Alide_1981 Alide_1981 2051415 2053439 - hypothetical protein KEGG: gox:GOX2135 hypothetical protein gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1981 Alide_1982 Alide_1982 Alide_1982 2053454 2054785 - amine oxidase PFAM: amine oxidase~KEGG: xal:XALc_2703 probable protoporphyrinogen oxidase protein gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1982 Alide_1983 Alide_1983 Alide_1983 2054791 2055756 - hypothetical protein manually curated~KEGG: reh:H16_A2892 hypothetical protein gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1983 Alide_1984 Alide_1984 Alide_1984 2055753 2056766 - glycosyl transferase family 2 KEGG: cph:Cpha266_0350 glycosyl transferase family protein~manually curated~PFAM: glycosyl transferase family 2 gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1984 Alide_1985 Alide_1985 Alide_1985 2056865 2058238 - peptidase U32 PFAM: peptidase U32~KEGG: dia:Dtpsy_2273 peptidase U32 gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1985 Alide_1986 Alide_1986 Alide_1986 2058287 2059657 - hypothetical protein KEGG: dac:Daci_1894 hypothetical protein gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1986 Alide_1987 Alide_1987 Alide_1987 2059685 2060566 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: pol:Bpro_2444 LysR family transcriptional regulator gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1987 Alide_1988 Alide_1988 Alide_1988 2060710 2061423 + protein of unknown function DUF81 PFAM: protein of unknown function DUF81~KEGG: pol:Bpro_2443 hypothetical protein gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1988 Alide_1989 Alide_1989 Alide_1989 2061443 2061976 - response regulator receiver KEGG: dia:Dtpsy_2271 two component transcriptional regulator%2C fis family~PFAM: response regulator receiver%3B helix-turn-helix Fis-type~SMART: response regulator receiver gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1989 Alide_1990 Alide_1990 Alide_1990 2061977 2063293 - ATP-binding region ATPase domain protein KEGG: ajs:Ajs_2780 integral membrane sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1990 Alide_1991 Alide_1991 Alide_1991 2063290 2064099 - Surfeit locus 1 family protein PFAM: Surfeit locus 1 family protein~KEGG: ajs:Ajs_2779 surfeit locus 1 family protein gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1991 Alide_1992 Alide_1992 Alide_1992 2064096 2064470 - cytochrome o ubiquinol oxidase subunit IV KEGG: ajs:Ajs_2778 cytochrome c oxidase subunit IV~TIGRFAM: cytochrome o ubiquinol oxidase subunit IV~PFAM: cytochrome C oxidase subunit IV gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1992 Alide_1993 Alide_1993 Alide_1993 2064471 2065103 - cytochrome o ubiquinol oxidase%2C subunit III KEGG: dia:Dtpsy_2267 cytochrome o ubiquinol oxidase%2C subunit III~TIGRFAM: cytochrome o ubiquinol oxidase%2C subunit III~PFAM: cytochrome c oxidase subunit III gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1993 Alide_1994 Alide_1994 Alide_1994 2065096 2067102 - cytochrome o ubiquinol oxidase%2C subunit I TIGRFAM: cytochrome o ubiquinol oxidase%2C subunit I~KEGG: ajs:Ajs_2776 cytochrome-c oxidase~PFAM: cytochrome c oxidase subunit I gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1994 Alide_1995 Alide_1995 Alide_1995 2067127 2068116 - ubiquinol oxidase%2C subunit II KEGG: ajs:Ajs_2775 ubiquinol oxidase%2C subunit II~TIGRFAM: ubiquinol oxidase%2C subunit II~PFAM: COX aromatic rich domain protein%3B cytochrome c oxidase subunit II gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1995 Alide_1996 Alide_1996 Alide_1996 2068418 2069749 + general substrate transporter KEGG: ajs:Ajs_2774 general substrate transporter gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1996 Alide_1997 Alide_1997 Alide_1997 2069858 2070820 - protein TolA KEGG: dia:Dtpsy_2263 protein TolA~TIGRFAM: protein TolA%3B TonB family protein~PFAM: Tol-Pal system TolA gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1997 Alide_1998 Alide_1998 Alide_1998 2070842 2071267 - Biopolymer transport protein ExbD/TolR PFAM: Biopolymer transport protein ExbD/TolR~KEGG: ajs:Ajs_2772 biopolymer transport protein ExbD/TolR gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1998 Alide_1999 Alide_1999 Alide_1999 2071281 2071982 - protein TolQ KEGG: dia:Dtpsy_2261 protein TolQ~TIGRFAM: protein TolQ~PFAM: MotA/TolQ/ExbB proton channel gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_1999 Alide_2000 Alide_2000 Alide_2000 2071979 2072401 - tol-pal system-associated acyl-CoA thioesterase KEGG: dia:Dtpsy_2260 tol-pal system-associated acyl-CoA thioesterase~TIGRFAM: tol-pal system-associated acyl-CoA thioesterase~PFAM: thioesterase superfamily protein gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2000 Alide_2001 Alide_2001 Alide_2001 2072404 2073588 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: dia:Dtpsy_2259 aminotransferase gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2001 Alide_2002 Alide_2002 Alide_2002 2073660 2074205 - transcription antitermination factor NusB KEGG: dia:Dtpsy_2258 NusB antitermination factor~TIGRFAM: transcription antitermination factor NusB~PFAM: NusB/RsmB/TIM44 gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2002 Alide_2003 Alide_2003 Alide_2003 2074202 2074666 - 6%2C7-dimethyl-8-ribityllumazine synthase KEGG: ajs:Ajs_2767 6%2C7-dimethyl-8-ribityllumazine synthase~TIGRFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~PFAM: 67-dimethyl-8-ribityllumazine synthase gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2003 Alide_2004 Alide_2004 Alide_2004 2074670 2075791 - 3%2C4-dihydroxy-2-butanone 4-phosphate synthase KEGG: dia:Dtpsy_2256 3%2C4-dihydroxy-2-butanone 4-phosphate synthase~TIGRFAM: 3%2C4-dihydroxy-2-butanone 4-phosphate synthase~PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase%3B GTP cyclohydrolase II gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2004 Alide_2005 Alide_2005 Alide_2005 2075929 2076216 - ferredoxin PFAM: ferredoxin~KEGG: dia:Dtpsy_2255 ferredoxin gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2005 Alide_2006 Alide_2006 Alide_2006 2076574 2077455 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: pna:Pnap_2699 NUDIX hydrolase gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2006 Alide_2007 Alide_2007 Alide_2007 2077586 2078494 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: ajs:Ajs_2522 short-chain dehydrogenase/reductase SDR gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2007 Alide_2008 Alide_2008 Alide_2008 2078602 2080131 + glutamate/cysteine ligase TIGRFAM: glutamate/cysteine ligase~KEGG: dia:Dtpsy_1339 glutamate/cysteine ligase~PFAM: glutamate--cysteine ligase gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2008 Alide_2009 Alide_2009 Alide_2009 2080177 2082360 + protein of unknown function DUF893 YccS/YhfK KEGG: vap:Vapar_3567 protein of unknown function DUF893 YccS/YhfK gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2009 Alide_2010 Alide_2010 Alide_2010 2082357 2082569 - hypothetical protein KEGG: aav:Aave_2269 hypothetical protein gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2010 Alide_2011 Alide_2011 Alide_2011 2082667 2083032 - Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP~KEGG: pol:Bpro_4413 endoribonuclease L-PSP gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2011 Alide_2012 Alide_2012 Alide_2012 2083067 2084455 - BFD domain protein (2Fe-2S)-binding domain protein PFAM: BFD domain protein [2Fe-2S]-binding domain protein%3B FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: pol:Bpro_4414 BFD-like (2Fe-2S)-binding region gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2012 Alide_2013 Alide_2013 Alide_2013 2084457 2084801 - hypothetical protein KEGG: pol:Bpro_4415 hypothetical protein gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2013 Alide_2014 Alide_2014 Alide_2014 2084791 2085927 - FAD dependent oxidoreductase KEGG: pol:Bpro_4416 FAD dependent oxidoreductase~manually curated~PFAM: FAD dependent oxidoreductase gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2014 Alide_2015 Alide_2015 Alide_2015 2085972 2086955 - hypothetical protein KEGG: dac:Daci_0779 hypothetical protein gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2015 Alide_2016 Alide_2016 Alide_2016 2087030 2087953 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: pol:Bpro_4347 LysR family transcriptional regulator gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2016 Alide_2017 Alide_2017 Alide_2017 2088126 2089085 + ribosome biogenesis GTP-binding protein YlqF KEGG: ajs:Ajs_2510 GTP-binding protein%2C HSR1-related~TIGRFAM: ribosome biogenesis GTP-binding protein YlqF~PFAM: GTP-binding protein HSR1-related gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2017 Alide_2018 Alide_2018 Alide_2018 2089167 2090996 - hypothetical protein KEGG: dia:Dtpsy_1352 hypothetical protein gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2018 Alide_2019 Alide_2019 Alide_2019 2091043 2091891 - pseudouridine synthase KEGG: dia:Dtpsy_1355 pseudouridine synthase~manually curated~PFAM: pseudouridine synthase gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2019 Alide_2020 Alide_2020 Alide_2020 2091810 2092103 - hypothetical protein KEGG: dia:Dtpsy_1356 hypothetical protein gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2020 Alide_2021 Alide_2021 Alide_2021 2092206 2093132 + phosphoesterase DHHA1 PFAM: phosphoesterase DHHA1~KEGG: ajs:Ajs_2502 phosphoesterase%2C DHHA1 gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2021 Alide_2022 Alide_2022 Alide_2022 2093183 2094418 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: aav:Aave_2285 major facilitator superfamily transporter gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2022 Alide_2023 Alide_2023 Alide_2023 2094460 2094885 - nuclease (SNase domain-containing protein) KEGG: ajs:Ajs_2501 nuclease~PFAM: nuclease (SNase domain-containing protein)~SMART: nuclease (SNase domain-containing protein) gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2023 Alide_2024 Alide_2024 Alide_2024 2094984 2095859 + RarD protein%2C DMT superfamily transporter TIGRFAM: RarD protein%2C DMT superfamily transporter~KEGG: dia:Dtpsy_1360 RarD protein%2C DMT superfamily transporter gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2024 Alide_2025 Alide_2025 Alide_2025 2095893 2096459 - pseudouridine synthase PFAM: pseudouridine synthase~KEGG: dia:Dtpsy_1363 pseudouridine synthase gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2025 Alide_2026 Alide_2026 Alide_2026 2096456 2097286 - Peptidase M23 PFAM: Peptidase M23~KEGG: ajs:Ajs_2496 peptidase M23B gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2026 Alide_2027 Alide_2027 Alide_2027 2097559 2098962 + fumarate lyase PFAM: fumarate lyase%3B Fumarase C-like~KEGG: dia:Dtpsy_1365 fumarate lyase gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2027 Alide_2028 Alide_2028 Alide_2028 2099035 2099841 - protein of unknown function DUF306 Meta and HslJ PFAM: protein of unknown function DUF306 Meta and HslJ~KEGG: dac:Daci_2483 protein of unknown function DUF306 MetA and HslJ gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2028 Alide_2029 Alide_2029 Alide_2029 2099907 2100446 - protein of unknown function DUF924 PFAM: protein of unknown function DUF924~KEGG: dia:Dtpsy_3311 protein of unknown function DUF924 gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2029 Alide_2030 Alide_2030 Alide_2030 2100464 2102275 - glutaminyl-tRNA synthetase KEGG: ajs:Ajs_1608 glutaminyl-tRNA synthetase~TIGRFAM: glutaminyl-tRNA synthetase~PFAM: Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C catalytic domain%3B Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C anti-codon binding domain gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2030 Alide_2031 Alide_2031 Alide_2031 2102415 2102753 + hypothetical protein KEGG: dia:Dtpsy_2105 hypothetical protein gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2031 Alide_2032 Alide_2032 Alide_2032 2102862 2103311 + 3-dehydroquinate dehydratase%2C type II TIGRFAM: 3-dehydroquinate dehydratase%2C type II~KEGG: ajs:Ajs_1610 3-dehydroquinate dehydratase~PFAM: dehydroquinase class II gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2032 Alide_2033 Alide_2033 Alide_2033 2103305 2104198 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: dia:Dtpsy_2103 alpha/beta hydrolase fold protein gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2033 Alide_2034 Alide_2034 Alide_2034 2104195 2104620 + Class I peptide chain release factor PFAM: Class I peptide chain release factor~KEGG: dia:Dtpsy_2102 class I peptide chain release factor gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2034 Alide_2035 Alide_2035 Alide_2035 2104722 2105558 + Extradiol ring-cleavage dioxygenase class III protein subunit B PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B~KEGG: ajs:Ajs_1613 extradiol ring-cleavage dioxygenase III subunit B gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2035 Alide_2036 Alide_2036 Alide_2036 2105555 2106250 + phospholipase/Carboxylesterase PFAM: phospholipase/Carboxylesterase~KEGG: vei:Veis_2297 phospholipase/carboxylesterase gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2036 Alide_2037 Alide_2037 Alide_2037 2106431 2107309 + hypothetical protein KEGG: ajs:Ajs_1615 hypothetical protein gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2037 Alide_2038 Alide_2038 Alide_2038 2107328 2107798 - Transcription regulator AsnC-type-like protein KEGG: ajs:Ajs_1616 AsnC family transcriptional regulator~PFAM: Transcription regulator AsnC-type-like~SMART: Transcription regulator AsnC-type gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2038 Alide_2039 Alide_2039 Alide_2039 2107902 2110529 + 2-oxo-acid dehydrogenase E1 subunit%2C homodimeric type KEGG: ajs:Ajs_1617 2-oxoacid dehydrogenase subunit E1~TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit%2C homodimeric type%3B alpha-ketoglutarate dehydrogenase~PFAM: Transketolase domain-containing protein%3B Transketolase central region gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2039 Alide_2040 Alide_2040 Alide_2040 2110546 2111832 - Amidase PFAM: Amidase~KEGG: bpt:Bpet0082 putative amidase gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2040 Alide_2041 Alide_2041 Alide_2041 2111841 2112704 - hypothetical protein manually curated~KEGG: aav:Aave_3937 hypothetical protein gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2041 Alide_2042 Alide_2042 Alide_2042 2112728 2113132 - Mor transcription activator domain protein PFAM: Mor transcription activator domain protein~KEGG: bbr:BB3657 phage-related putative DNA-binding protein gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2042 Alide_2043 Alide_2043 Alide_2043 2113122 2113802 - hypothetical protein KEGG: cvi:CV_2164 hypothetical protein gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2043 Alide_2044 Alide_2044 Alide_2044 2113870 2114142 - histone family protein DNA-binding protein KEGG: aav:Aave_1666 histone family protein DNA-binding protein~PFAM: histone family protein DNA-binding protein~SMART: histone family protein DNA-binding protein gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2044 Alide_2045 Alide_2045 Alide_2045 2114317 2114556 - hypothetical protein KEGG: aav:Aave_4127 hypothetical protein gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2045 Alide_2046 Alide_2046 Alide_2046 2114553 2114777 - hypothetical protein KEGG: pol:Bpro_3763 hypothetical protein gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2046 Alide_2047 Alide_2047 Alide_2047 2114774 2115160 - hypothetical protein KEGG: pna:Pnap_3330 hypothetical protein gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2047 Alide_2048 Alide_2048 Alide_2048 2115160 2115414 - hypothetical protein KEGG: gla:GL50803_88750 hypothetical protein gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2048 Alide_2049 Alide_2049 Alide_2049 2115402 2115560 - hypothetical protein gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2049 Alide_2050 Alide_2050 Alide_2050 2115560 2116108 - hypothetical protein KEGG: pol:Bpro_3759 hypothetical protein gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2050 Alide_2051 Alide_2051 Alide_2051 2116121 2116405 - hypothetical protein KEGG: bqu:BQ10670 hypothetical protein gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2051 Alide_2052 Alide_2052 Alide_2052 2116402 2117022 - hypothetical protein KEGG: lch:Lcho_2277 hypothetical protein gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2052 Alide_2053 Alide_2053 Alide_2053 2117022 2117261 - hypothetical protein KEGG: glo:Glov_0377 hypothetical protein gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2053 Alide_2054 Alide_2054 Alide_2054 2117261 2117413 - hypothetical protein gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2054 Alide_2055 Alide_2055 Alide_2055 2117416 2118708 - hypothetical protein KEGG: sgl:SG0822 hypothetical protein gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2055 Alide_2056 Alide_2056 Alide_2056 2118668 2120488 - Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: cvi:CV_2156 hypothetical protein gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2056 Alide_2057 Alide_2057 Alide_2057 2120475 2121539 - hypothetical protein KEGG: cvi:CV_2155 hypothetical protein gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2057 Alide_2058 Alide_2058 Alide_2058 2121566 2121874 - regulatory protein IclR PFAM: regulatory protein IclR~KEGG: mfa:Mfla_2714 hypothetical protein gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2058 Alide_2059 Alide_2059 Alide_2059 2121871 2122155 - hypothetical protein KEGG: bps:BPSL1153 hypothetical protein gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2059 Alide_2060 Alide_2060 Alide_2060 2122158 2122628 - hypothetical protein KEGG: bbr:BB3644 hypothetical protein gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2060 Alide_2061 Alide_2061 Alide_2061 2122733 2123170 + hypothetical protein KEGG: bbt:BBta_4603 putative polysaccharide deacetylase gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2061 Alide_2062 Alide_2062 Alide_2062 2123106 2123417 - hypothetical protein KEGG: gau:GAU_1846 hypothetical protein gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2062 Alide_2063 Alide_2063 Alide_2063 2123414 2123713 - hypothetical protein KEGG: bbr:BB3643 hypothetical protein gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2063 Alide_2064 Alide_2064 Alide_2064 2123745 2123942 - hypothetical protein KEGG: bcj:BCAL1594 hypothetical protein gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2064 Alide_2065 Alide_2065 Alide_2065 2124038 2124544 + CI repressor PFAM: CI repressor~KEGG: hsm:HSM_0646 hypothetical protein gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2065 Alide_2066 Alide_2066 Alide_2066 2124572 2125153 + hypothetical protein KEGG: nvi:100122395 similar to n6-adenosine-methyltransferase ime4 gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2066 Alide_2067 Alide_2067 Alide_2067 2125201 2125716 + hypothetical protein KEGG: sml:Smlt0146 putative TPR repeat protein gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2067 Alide_2068 Alide_2068 Alide_2068 2125913 2126272 + putative phage-related membrane protein KEGG: rsc:RCFBP_11706 putative phage-related membrane protein gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2068 Alide_2069 Alide_2069 Alide_2069 2126275 2126922 + Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic~KEGG: dvm:DvMF_0723 lytic transglycosylase catalytic gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2069 Alide_2070 Alide_2070 Alide_2070 2126919 2127131 + hypothetical protein KEGG: bcb:BCB4264_A3495 hypothetical protein gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2070 Alide_2071 Alide_2071 Alide_2071 2127178 2127711 + hypothetical protein KEGG: ctt:CtCNB1_3551 hypothetical protein gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2071 Alide_2072 Alide_2072 Alide_2072 2127704 2127961 + phage/conjugal plasmid C-4 type zinc finger protein%2C TraR family TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein%2C TraR family~KEGG: pol:Bpro_3778 TraR/DksA family transcriptional regulator gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2072 Alide_2073 Alide_2073 Alide_2073 2127961 2128263 + hypothetical protein KEGG: bbr:BB3635 hypothetical protein gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2073 Alide_2074 Alide_2074 Alide_2074 2128260 2128553 + hypothetical protein KEGG: bbr:BB3634 hypothetical protein gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2074 Alide_2075 Alide_2075 Alide_2075 2128557 2129099 + hypothetical protein KEGG: bbr:BB3633 hypothetical protein gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2075 Alide_2076 Alide_2076 Alide_2076 2129096 2129239 + formate/nitrate transporter KEGG: pap:PSPA7_2455 formate/nitrate transporter gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2076 Alide_2077 Alide_2077 Alide_2077 2129236 2130600 + prophage MuMc02%2C terminase%2C ATPase subunit%2C putative KEGG: mca:MCA2933 prophage MuMc02%2C terminase%2C ATPase subunit%2C putative gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2077 Alide_2078 Alide_2078 Alide_2078 2130607 2132196 + protein of unknown function DUF935 PFAM: protein of unknown function DUF935~KEGG: slt:Slit_0224 protein of unknown function DUF935 gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2078 Alide_2079 Alide_2079 Alide_2079 2132306 2133544 + head morphogenesis protein SPP1 gp7 PFAM: head morphogenesis protein SPP1 gp7~KEGG: hdu:HD1557 bacteriophage Mu GP30-like protein gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2079 Alide_2080 Alide_2080 Alide_2080 2133664 2134227 + phage virion morphogenesis protein TIGRFAM: phage virion morphogenesis protein~KEGG: hdu:HD1558 bacteriophage Mu G-like protein gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2080 Alide_2081 Alide_2081 Alide_2081 2134276 2135439 + Mu-like prophage I protein PFAM: Mu-like prophage I protein~KEGG: pag:PLES_15791 protease (I) and scaffold (Z) proteins gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2081 Alide_2082 Alide_2082 Alide_2082 2135463 2135873 + hypothetical protein KEGG: mag:amb1767 hypothetical protein gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2082 Alide_2083 Alide_2083 Alide_2083 2135901 2136794 + Mu-like prophage major head subunit gpT KEGG: mag:amb1768 Mu-like prophage major head subunit gpT gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2083 Alide_2084 Alide_2084 Alide_2084 2136819 2137121 + hypothetical protein KEGG: mag:amb1769 hypothetical protein gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2084 Alide_2085 Alide_2085 Alide_2085 2137202 2137738 + protein of unknown function DUF1320 PFAM: protein of unknown function DUF1320~KEGG: hdu:HD1562 hypothetical protein gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2085 Alide_2086 Alide_2086 Alide_2086 2137745 2138179 + hypothetical protein KEGG: hma:rrnAC2056 D-3-phosphoglycerate dehydrogenase gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2086 Alide_2087 Alide_2087 Alide_2087 2138176 2138400 + inner-membrane translocator KEGG: fre:Franean1_4038 inner-membrane translocator gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2087 Alide_2088 Alide_2088 Alide_2088 2138397 2139359 + hypothetical protein KEGG: dac:Daci_1328 hypothetical protein gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2088 Alide_2089 Alide_2089 Alide_2089 2139404 2139895 + hypothetical protein KEGG: sco:SCO4763 hypothetical protein gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2089 Alide_2090 Alide_2090 Alide_2090 2139958 2140269 + protein of unknown function DUF1799 phage-related protein PFAM: protein of unknown function DUF1799 phage-related~KEGG: mfa:Mfla_2690 hypothetical protein gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2090 Alide_2091 Alide_2091 Alide_2091 2140292 2145208 + Prophage tail length tape measure PFAM: Prophage tail length tape measure~KEGG: pop:POPTR_595161 hypothetical protein gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2091 Alide_2092 Alide_2092 Alide_2092 2145205 2146119 + carbohydrate-binding family V/XII protein KEGG: aav:Aave_1783 carbohydrate-binding family V/XII protein gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2092 Alide_2093 Alide_2093 Alide_2093 2146217 2146789 + hypothetical protein KEGG: dac:Daci_1333 hypothetical protein gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2093 Alide_2094 Alide_2094 Alide_2094 2146806 2147261 + hypothetical protein KEGG: wsu:WS1759 flagellar hook protein FlgE gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2094 Alide_2095 Alide_2095 Alide_2095 2147261 2147740 + hypothetical protein KEGG: dac:Daci_2627 hypothetical protein gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2095 Alide_2096 Alide_2096 Alide_2096 2147737 2148072 + hypothetical protein KEGG: scl:sce7319 hypothetical protein gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2096 Alide_2097 Alide_2097 Alide_2097 2148069 2148320 + hypothetical protein KEGG: rru:Rru_A2371 hydroxyacylglutathione hydrolase gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2097 Alide_2098 Alide_2098 Alide_2098 2148334 2148867 + hypothetical protein KEGG: rsl:RPSI07_0238 hypothetical protein gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2098 Alide_2099 Alide_2099 Alide_2099 2148871 2149548 + hypothetical protein KEGG: sil:SPO2726 hypothetical protein gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2099 Alide_2100 Alide_2100 Alide_2100 2149550 2149675 - pseudogene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2100 Alide_2101 Alide_2101 Alide_2101 2149688 2150776 - transposase IS4 family protein KEGG: ajs:Ajs_3918 transposase%2C IS4 family protein~manually curated~PFAM: transposase IS4 family protein gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2101 Alide_2102 Alide_2102 Alide_2102 2150892 2151020 + pseudogene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2102 Alide_2103 Alide_2103 Alide_2103 2151028 2151564 + hypothetical protein KEGG: mno:Mnod_2441 hypothetical protein gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2103 Alide_2104 Alide_2104 Alide_2104 2151672 2151911 - hypothetical protein KEGG: vap:Vapar_5547 hypothetical protein gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2104 Alide_2105 Alide_2105 Alide_2105 2152022 2152939 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: hmg:100212933 similar to lysR transcriptional regulator gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2105 Alide_2106 Alide_2106 Alide_2106 2152974 2153753 + GntR domain protein KEGG: vap:Vapar_5148 GntR domain protein~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2106 Alide_2107 Alide_2107 Alide_2107 2153906 2155228 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: vap:Vapar_5147 major facilitator superfamily MFS_1 gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2107 Alide_2108 Alide_2108 Alide_2108 2155240 2156130 + 3-hydroxyisobutyrate dehydrogenase KEGG: vap:Vapar_5146 3-hydroxyisobutyrate dehydrogenase~PFAM: 6-phosphogluconate dehydrogenase NAD-binding gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2108 Alide_2109 Alide_2109 Alide_2109 2156201 2157214 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase~KEGG: vap:Vapar_5145 NAD-dependent epimerase/dehydratase gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2109 Alide_2110 Alide_2110 Alide_2110 2157218 2158480 + type III effector Hrp-dependent outer domain protein PFAM: type III effector Hrp-dependent outers~KEGG: vap:Vapar_5144 type III effector Hrp-dependent outers gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2110 Alide_2111 Alide_2111 Alide_2111 2158477 2159142 + class II aldolase/adducin family protein PFAM: class II aldolase/adducin family protein~KEGG: vap:Vapar_5143 putative aldolase gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2111 Alide_2112 Alide_2112 Alide_2112 2159152 2159961 + Hydroxypyruvate isomerase KEGG: pol:Bpro_4876 hydroxypyruvate isomerase~PFAM: Xylose isomerase domain-containing protein TIM barrel gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2112 Alide_2113 Alide_2113 Alide_2113 2160003 2160836 - protein of unknown function DUF980 PFAM: protein of unknown function DUF980~KEGG: ajs:Ajs_1618 hypothetical protein gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2113 Alide_2114 Alide_2114 Alide_2114 2160841 2161623 - metallophosphoesterase PFAM: metallophosphoesterase~KEGG: dia:Dtpsy_2095 UDP-2%2C3-diacylglucosamine hydrolase gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2114 Alide_2115 Alide_2115 Alide_2115 2161628 2162155 - Peptidylprolyl isomerase KEGG: dia:Dtpsy_2094 peptidyl-prolyl cis-trans isomerase cyclophilin type~PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2115 Alide_2116 Alide_2116 Alide_2116 2162177 2162764 - Peptidylprolyl isomerase KEGG: dia:Dtpsy_2093 peptidyl-prolyl cis-trans isomerase cyclophilin type~PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2116 Alide_2117 Alide_2117 Alide_2117 2162761 2164131 - ErfK/YbiS/YcfS/YnhG family protein PFAM: ErfK/YbiS/YcfS/YnhG family protein~KEGG: aav:Aave_2318 ErfK/YbiS/YcfS/YnhG gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2117 Alide_2118 Alide_2118 Alide_2118 2164210 2165298 - Tetratricopeptide TPR_1 repeat-containing protein PFAM: Tetratricopeptide TPR_1 repeat-containing protein~KEGG: aav:Aave_2319 TPR repeat-containing protein gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2118 Alide_2119 Alide_2119 Alide_2119 2165522 2166898 + cysteinyl-tRNA synthetase TIGRFAM: cysteinyl-tRNA synthetase~KEGG: ajs:Ajs_1623 cysteinyl-tRNA synthetase~PFAM: Cysteinyl-tRNA synthetase class Ia %3B Cysteinyl-tRNA synthetase class Ia DALR gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2119 Alide_2120 Alide_2120 Alide_2120 2166944 2167591 + DNA-3-methyladenine glycosylase II SMART: HhH-GPD family protein~manually curated~KEGG: dia:Dtpsy_2090 HhH-GPD family protein~PFAM: HhH-GPD family protein gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2120 Alide_2121 Alide_2121 Alide_2121 2167643 2168620 + acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit KEGG: ajs:Ajs_1625 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha~TIGRFAM: acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit~PFAM: Acetyl-CoA carboxylase%2C alpha subunit%2C conserved region gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2121 Alide_2122 Alide_2122 Alide_2122 2168688 2169695 + tRNA(Ile)-lysidine synthetase KEGG: ajs:Ajs_1627 tRNA(Ile)-lysidine synthetase~TIGRFAM: tRNA(Ile)-lysidine synthetase~PFAM: PP-loop domain protein%3B Protein of unkown function DUF1946 PP-loop ATpase gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2122 Alide_2123 Alide_2123 Alide_2123 2169732 2171003 + aspartate kinase KEGG: aav:Aave_2324 aspartate kinase~TIGRFAM: aspartate kinase%3B aspartate kinase%2C monofunctional class~PFAM: aspartate/glutamate/uridylate kinase%3B amino acid-binding ACT domain protein gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2123 Alide_2124 Alide_2124 Alide_2124 2171050 2172405 - Cl- channel voltage-gated family protein PFAM: Cl- channel voltage-gated family protein~KEGG: aav:Aave_4712 Cl-channel%2C voltage-gated family protein gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2124 Alide_2125 Alide_2125 Alide_2125 2172850 2174787 + pseudogene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2125 Alide_2126 Alide_2126 Alide_2126 2173137 2174051 - Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_0907 integrase catalytic subunit gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2126 Alide_2127 Alide_2127 Alide_2127 2174048 2174371 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2127 Alide_2128 Alide_2128 Alide_2128 2174784 2175935 + efflux transporter%2C RND family%2C MFP subunit KEGG: dia:Dtpsy_1685 efflux transporter%2C RND family%2C MFP subunit~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2128 Alide_2129 Alide_2129 Alide_2129 2175932 2177131 + protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: dia:Dtpsy_1686 protein of unknown function DUF214 gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2129 Alide_2130 Alide_2130 Alide_2130 2177136 2177846 + ABC transporter related protein KEGG: ajs:Ajs_1836 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2130 Alide_2131 Alide_2131 Alide_2131 2177917 2179245 - lytic murein transglycosylase KEGG: ajs:Ajs_1837 lytic murein transglycosylase~TIGRFAM: lytic murein transglycosylase~PFAM: Peptidoglycan-binding domain 1 protein gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2131 Alide_2132 Alide_2132 Alide_2132 2179292 2180728 + Exodeoxyribonuclease I PFAM: Exonuclease domain protein%3B Exonuclease RNase T and DNA polymerase III~KEGG: ajs:Ajs_1838 exonuclease I~SMART: Exonuclease gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2132 Alide_2133 Alide_2133 Alide_2133 2180700 2181548 + Silent information regulator protein Sir2 PFAM: Silent information regulator protein Sir2~KEGG: ajs:Ajs_1839 silent information regulator protein Sir2 gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2133 Alide_2134 Alide_2134 Alide_2134 2181681 2184044 + protein of unknown function UPF0118 KEGG: dia:Dtpsy_1696 putative phytochrome sensor protein~PFAM: protein of unknown function UPF0118%3B GAF domain protein~SMART: GAF domain protein gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2134 Alide_2135 Alide_2135 Alide_2135 2184026 2184595 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: aav:Aave_3219 GCN5-related N-acetyltransferase gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2135 Alide_2136 Alide_2136 Alide_2136 2184592 2185221 - uracil phosphoribosyltransferase KEGG: dia:Dtpsy_1697 uracil phosphoribosyltransferase~TIGRFAM: uracil phosphoribosyltransferase~PFAM: phosphoribosyltransferase gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2136 Alide_2137 Alide_2137 Alide_2137 2185310 2186296 - Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: dia:Dtpsy_1698 pyridoxal-5'-phosphate-dependent protein beta subunit gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2137 Alide_2138 Alide_2138 Alide_2138 2186547 2187251 + protein of unknown function DUF28 PFAM: protein of unknown function DUF28~KEGG: dia:Dtpsy_1700 hypothetical protein gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2138 Alide_2139 Alide_2139 Alide_2139 2187385 2187548 + pseudogene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2139 Alide_2140 Alide_2140 Alide_2140 2187915 2189339 + cytochrome c oxidase accessory protein CcoG TIGRFAM: cytochrome c oxidase accessory protein CcoG~KEGG: dia:Dtpsy_1004 cytochrome c oxidase accessory protein CcoG gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2140 Alide_2141 Alide_2141 Alide_2141 2189366 2190784 + cytochrome bd ubiquinol oxidase subunit I PFAM: cytochrome bd ubiquinol oxidase subunit I~KEGG: ara:Arad_12230 cytochrome bd-type quinol oxidase subunit 1 gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2141 Alide_2142 Alide_2142 Alide_2142 2190788 2191798 + cytochrome d ubiquinol oxidase%2C subunit II KEGG: msl:Msil_2643 cytochrome d ubiquinol oxidase%2C subunit II~TIGRFAM: cytochrome d ubiquinol oxidase%2C subunit II~PFAM: cytochrome bd ubiquinol oxidase subunit II gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2142 Alide_2143 Alide_2143 Alide_2143 2191798 2191944 + Protein of unknown function DUF2474 PFAM: Protein of unknown function DUF2474~KEGG: ara:Arad_12232 hypothetical protein gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2143 Alide_2144 Alide_2144 Alide_2144 2192365 2193060 - LrgB family protein PFAM: LrgB family protein~KEGG: dia:Dtpsy_2405 LrgB family protein gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2144 Alide_2145 Alide_2145 Alide_2145 2193057 2193458 - LrgA family protein PFAM: LrgA family protein~KEGG: ctt:CtCNB1_3605 LrgA gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2145 Alide_2146 Alide_2146 Alide_2146 2193667 2195094 + regulatory protein GntR HTH KEGG: mpt:Mpe_A0752 GntR family transcriptional regulator~PFAM: regulatory protein GntR HTH%3B aminotransferase class I and II~SMART: regulatory protein GntR HTH gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2146 Alide_2147 Alide_2147 Alide_2147 2195183 2195884 - Glutathione S-transferase domain protein PFAM: Glutathione S-transferase domain~KEGG: dia:Dtpsy_1701 glutathione S-transferase domain protein gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2147 Alide_2148 Alide_2148 Alide_2148 2195955 2197460 - protein of unknown function DUF853 NPT hydrolase PFAM: protein of unknown function DUF853 NPT hydrolase~KEGG: dia:Dtpsy_1702 protein of unknown function DUF853 NPT hydrolase putative gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2148 Alide_2149 Alide_2149 Alide_2149 2197533 2198252 + protein of unknown function DUF28 PFAM: protein of unknown function DUF28~KEGG: dia:Dtpsy_1703 hypothetical protein gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2149 Alide_2150 Alide_2150 Alide_2150 2198249 2199535 + phosphoribosylamine/glycine ligase TIGRFAM: phosphoribosylamine/glycine ligase~KEGG: ajs:Ajs_1899 phosphoribosylamine--glycine ligase~PFAM: Phosphoribosylglycinamide synthetase%2C ATP-grasp (A) domain%3B Phosphoribosylglycinamide synthetase%2C N-domain%3B Phosphoribosylglycinamide synthetase%2C C-domain gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2150 Alide_2151 Alide_2151 Alide_2151 2199535 2200461 + Coproporphyrinogen oxidase KEGG: dia:Dtpsy_1705 coproporphyrinogen III oxidase~PFAM: coproporphyrinogen III oxidase gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2151 Alide_2152 Alide_2152 Alide_2152 2200545 2201210 + iojap-like protein KEGG: dia:Dtpsy_1706 iojap-like protein~TIGRFAM: iojap-like protein~PFAM: Iojap-related protein gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2152 Alide_2153 Alide_2153 Alide_2153 2201210 2201677 + protein of unknown function DUF163 PFAM: protein of unknown function DUF163~KEGG: aav:Aave_3199 rRNA large subunit methyltransferase gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2153 Alide_2154 Alide_2154 Alide_2154 2201745 2202350 + maf protein KEGG: dia:Dtpsy_1708 maf protein~TIGRFAM: maf protein~PFAM: Maf family protein gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2154 Alide_2155 Alide_2155 Alide_2155 2202356 2203075 - cyclic nucleotide-binding protein KEGG: dia:Dtpsy_1709 transcriptional regulator%2C Crp/Fnr family~PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~SMART: cyclic nucleotide-binding%3B regulatory protein Crp gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2155 Alide_2156 Alide_2156 Alide_2156 2203282 2204877 - Hydroxylamine reductase KEGG: dia:Dtpsy_1710 cytochrome d1 heme region~PFAM: cytochrome c class I gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2156 Alide_2157 Alide_2157 Alide_2157 2204870 2206090 - Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: dia:Dtpsy_1711 radical SAM domain protein gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2157 Alide_2158 Alide_2158 Alide_2158 2206093 2206572 - AsnC family transcriptional regulator KEGG: ajs:Ajs_1907 AsnC family transcriptional regulator gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2158 Alide_2159 Alide_2159 Alide_2159 2206553 2208055 - hypothetical protein KEGG: dia:Dtpsy_1714 putative transcriptional regulator%2C AsnC family gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2159 Alide_2160 Alide_2160 Alide_2160 2208059 2209267 - cytochrome d1%2C heme region protein KEGG: ajs:Ajs_1910 cytochrome d1%2C heme region gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2160 Alide_2161 Alide_2161 Alide_2161 2209264 2209617 - hypothetical protein KEGG: dia:Dtpsy_1716 hypothetical protein gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2161 Alide_2162 Alide_2162 Alide_2162 2209640 2211364 - Hydroxylamine reductase KEGG: dia:Dtpsy_1717 hydroxylamine reductase gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2162 Alide_2163 Alide_2163 Alide_2163 2211576 2212403 + uroporphyrin-III C-methyltransferase KEGG: dia:Dtpsy_1718 uroporphyrin-III C-methyltransferase~TIGRFAM: uroporphyrin-III C-methyltransferase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2163 Alide_2164 Alide_2164 Alide_2164 2212485 2213972 + ribonuclease%2C Rne/Rng family KEGG: ajs:Ajs_1914 ribonuclease G~TIGRFAM: ribonuclease%2C Rne/Rng family~PFAM: RNA-binding protein AU-1/Ribonuclease E/G%3B RNA binding S1 domain protein gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2164 Alide_2165 Alide_2165 Alide_2165 2214148 2215833 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~KEGG: pca:Pcar_0095 putative sensory transduction system%2C regulatory protein~SMART: GGDEF domain containing protein gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2165 Alide_2166 Alide_2166 Alide_2166 2215767 2216564 - pseudogene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2166 Alide_2167 Alide_2167 Alide_2167 2216609 2217760 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: dia:Dtpsy_1720 putative aminotransferase gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2167 Alide_2168 Alide_2168 Alide_2168 2217902 2218843 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dia:Dtpsy_1721 transcriptional regulator CysB-like protein gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2168 Alide_2169 Alide_2169 Alide_2169 2218887 2219267 - cobalamin (vitamin B12) biosynthesis CbiX protein PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein~KEGG: dia:Dtpsy_1722 cobalamin (vitamin B12) biosynthesis CbiX protein gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2169 Alide_2170 Alide_2170 Alide_2170 2219301 2220401 - permease YjgP/YjgQ family protein PFAM: permease YjgP/YjgQ family protein~KEGG: dia:Dtpsy_1723 permease YjgP/YjgQ family protein gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2170 Alide_2171 Alide_2171 Alide_2171 2220398 2221492 - permease YjgP/YjgQ family protein KEGG: dia:Dtpsy_1724 permease YjgP/YjgQ family protein~manually curated~PFAM: permease YjgP/YjgQ family protein gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2171 Alide_2172 Alide_2172 Alide_2172 2221516 2223009 + peptidase M17 leucyl aminopeptidase domain protein PFAM: peptidase M17 leucyl aminopeptidase domain protein~KEGG: ajs:Ajs_1921 PepA aminopeptidase gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2172 Alide_2173 Alide_2173 Alide_2173 2223009 2223473 + DNA polymerase III chi subunit HolC PFAM: DNA polymerase III chi subunit HolC~KEGG: ajs:Ajs_1922 DNA polymerase III chi subunit%2C HolC gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2173 Alide_2174 Alide_2174 Alide_2174 2223473 2223874 + hypothetical protein KEGG: dia:Dtpsy_1727 hypothetical protein gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2174 Alide_2175 Alide_2175 Alide_2175 2224003 2225136 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: ajs:Ajs_1925 extracellular ligand-binding receptor gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2175 Alide_2176 Alide_2176 Alide_2176 2225227 2226234 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region~KEGG: ajs:Ajs_1926 D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD-binding gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2176 Alide_2177 Alide_2177 Alide_2177 2227138 2227401 + hypothetical protein KEGG: bmd:BMD_3062 N-acetylmuramoyl-L-alanine amidase gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2177 Alide_2178 Alide_2178 Alide_2178 2227449 2227949 - pseudogene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2178 Alide_2179 Alide_2179 Alide_2179 2228037 2228285 - pseudogene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2179 Alide_2180 Alide_2180 Alide_2180 2228723 2229181 + hypothetical protein manually curated~KEGG: ajs:Ajs_1927 hypothetical protein gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2180 Alide_2181 Alide_2181 Alide_2181 2229206 2229955 + Protein of unknown function DUF2257 KEGG: dia:Dtpsy_1731 hypothetical protein~manually curated~PFAM: Protein of unknown function DUF2257 gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2181 Alide_2182 Alide_2182 Alide_2182 2230050 2230490 + UspA domain-containing protein PFAM: UspA domain-containing protein~KEGG: dia:Dtpsy_1732 UspA domain protein gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2182 Alide_2183 Alide_2183 Alide_2183 2230552 2231064 - hemerythrin-like metal-binding protein KEGG: dac:Daci_4355 hypothetical protein~TIGRFAM: hemerythrin-like metal-binding protein~PFAM: Hemerythrin HHE cation binding domain protein gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2183 Alide_2184 Alide_2184 Alide_2184 2231177 2232154 - hypothetical protein KEGG: ajs:Ajs_1930 hypothetical protein gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2184 Alide_2185 Alide_2185 Alide_2185 2232295 2233479 - acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~KEGG: dia:Dtpsy_1734 beta-ketothiolase~PFAM: Thiolase-like gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2185 Alide_2186 Alide_2186 Alide_2186 2233588 2234358 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_1735 short-chain dehydrogenase/reductase SDR gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2186 Alide_2187 Alide_2187 Alide_2187 2234392 2235069 - pseudouridine synthase PFAM: pseudouridine synthase~KEGG: ajs:Ajs_1933 ribosomal large subunit pseudouridine synthase A gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2187 Alide_2188 Alide_2188 Alide_2188 2235059 2237227 - PAS sensor protein TIGRFAM: PAS sensor protein~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B PAS fold domain protein%3B response regulator receiver~KEGG: dia:Dtpsy_1737 signal transduction histidine kinase%2C nitrogen specific%2C NtrB~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B PAS domain containing protein%3B response regulator receiver gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2188 Alide_2189 Alide_2189 Alide_2189 2237273 2237671 - Peptidylprolyl isomerase KEGG: dia:Dtpsy_1738 peptidylprolyl isomerase~PFAM: peptidylprolyl isomerase FKBP-type gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2189 Alide_2190 Alide_2190 Alide_2190 2237951 2238745 + regulatory protein LuxR KEGG: dia:Dtpsy_1772 two component transcriptional regulator%2C LuxR family~PFAM: regulatory protein LuxR%3B response regulator receiver~SMART: regulatory protein LuxR%3B response regulator receiver gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2190 Alide_2191 Alide_2191 Alide_2191 2238783 2239643 + ATP-binding region ATPase domain protein KEGG: dia:Dtpsy_1773 putative signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2191 Alide_2192 Alide_2192 Alide_2192 2239735 2240322 + hypothetical protein KEGG: dia:Dtpsy_1406 hypothetical protein gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2192 Alide_2193 Alide_2193 Alide_2193 2240330 2241160 - Redoxin domain protein PFAM: Redoxin domain protein~KEGG: ajs:Ajs_2433 redoxin domain-containing protein gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2193 Alide_2194 Alide_2194 Alide_2194 2241387 2242010 + 2'%2C5' RNA ligase KEGG: dia:Dtpsy_1426 2'%2C5' RNA ligase gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2194 Alide_2195 Alide_2195 Alide_2195 2242085 2242564 - hypothetical protein KEGG: ajs:Ajs_2417 hypothetical protein gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2195 Alide_2196 Alide_2196 Alide_2196 2242691 2243161 - hypothetical protein KEGG: dia:Dtpsy_1431 hypothetical protein gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2196 Alide_2197 Alide_2197 Alide_2197 2243158 2243601 - putative transmembrane anti-sigma factor KEGG: dia:Dtpsy_1432 putative transmembrane anti-sigma factor gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2197 Alide_2198 Alide_2198 Alide_2198 2243617 2244171 - RNA polymerase sigma factor%2C sigma-70 family KEGG: dia:Dtpsy_1433 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2 gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2198 Alide_2199 Alide_2199 Alide_2199 2244274 2244594 + hypothetical protein KEGG: dia:Dtpsy_1434 hypothetical protein gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2199 Alide_2200 Alide_2200 Alide_2200 2244646 2246097 + RNA methyltransferase%2C TrmA family KEGG: dia:Dtpsy_1435 23S rRNA 5-methyluridine methyltransferase~TIGRFAM: RNA methyltransferase%2C TrmA family~PFAM: (Uracil-5)-methyltransferase gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2200 Alide_2201 Alide_2201 Alide_2201 2246109 2247452 + D-serine ammonia-lyase TIGRFAM: D-serine ammonia-lyase~KEGG: ajs:Ajs_2250 D-serine dehydratase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2201 Alide_2202 Alide_2202 Alide_2202 2247466 2248056 - Uncharacterized protein family UPF0029%2C Impact%2C N-terminal protein PFAM: Uncharacterised protein family UPF0029%2C Impact%2C N-terminal%3B Uncharacterised protein family UPF0029%2C Impact%2C C-terminal~KEGG: ajs:Ajs_2244 hypothetical protein gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2202 Alide_2203 Alide_2203 Alide_2203 2248238 2248696 + azurin KEGG: har:HEAR1365 azurin precursor~TIGRFAM: azurin~PFAM: blue (type 1) copper domain protein gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2203 Alide_2204 Alide_2204 Alide_2204 2248773 2251199 + Radical SAM domain protein KEGG: dia:Dtpsy_1631 radical SAM domain protein~PFAM: Radical SAM domain protein%3B Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2204 Alide_2205 Alide_2205 Alide_2205 2251309 2252505 - Aspartate transaminase KEGG: ajs:Ajs_2151 aromatic amino acid aminotransferase~PFAM: aminotransferase class I and II gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2205 Alide_2206 Alide_2206 Alide_2206 2252621 2254708 + excinuclease ABC%2C B subunit TIGRFAM: excinuclease ABC%2C B subunit~PFAM: helicase domain protein%3B type III restriction protein res subunit%3B UvrB/UvrC protein~KEGG: dia:Dtpsy_1636 excinuclease ABC subunit B~SMART: DEAD-like helicase %3B helicase domain protein gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2206 Alide_2207 Alide_2207 Alide_2207 2254959 2255495 + iron-sulfur cluster assembly transcription factor IscR KEGG: dia:Dtpsy_1637 transcriptional regulator%2C BadM/Rrf2 family~TIGRFAM: iron-sulfur cluster assembly transcription factor IscR%3B transcriptional regulator%2C Rrf2 family~PFAM: protein of unknown function UPF0074 gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2207 Alide_2208 Alide_2208 Alide_2208 2255571 2256791 + cysteine desulfurase IscS TIGRFAM: cysteine desulfurase IscS~KEGG: dia:Dtpsy_1638 cysteine desulfurase IscS~PFAM: aminotransferase class V gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2208 Alide_2209 Alide_2209 Alide_2209 2256814 2257215 + FeS cluster assembly scaffold IscU KEGG: dia:Dtpsy_1639 FeS cluster assembly scaffold IscU~TIGRFAM: FeS cluster assembly scaffold IscU~PFAM: nitrogen-fixing NifU domain protein gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2209 Alide_2210 Alide_2210 Alide_2210 2257223 2257546 + iron-sulfur cluster assembly protein IscA KEGG: dia:Dtpsy_1640 iron-sulfur cluster assembly protein IscA~TIGRFAM: iron-sulfur cluster assembly protein IscA%3B iron-sulfur cluster assembly accessory protein~PFAM: HesB/YadR/YfhF-family protein gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2210 Alide_2211 Alide_2211 Alide_2211 2257604 2258122 + co-chaperone Hsc20 TIGRFAM: co-chaperone Hsc20~PFAM: HSC20 oligomerisation%3B heat shock protein DnaJ domain protein~KEGG: dia:Dtpsy_1641 co-chaperone Hsc20~SMART: heat shock protein DnaJ domain protein gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2211 Alide_2212 Alide_2212 Alide_2212 2258159 2260027 + Fe-S protein assembly chaperone HscA KEGG: dia:Dtpsy_1642 chaperone protein HscA~TIGRFAM: Fe-S protein assembly chaperone HscA~PFAM: Heat shock protein 70 gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2212 Alide_2213 Alide_2213 Alide_2213 2260063 2260401 + ferredoxin%2C 2Fe-2S type%2C ISC system KEGG: dia:Dtpsy_1643 ferredoxin%2C 2Fe-2S type%2C ISC system~TIGRFAM: ferredoxin%2C 2Fe-2S type%2C ISC system~PFAM: ferredoxin gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2213 Alide_2214 Alide_2214 Alide_2214 2260401 2261129 + DNA polymerase III%2C epsilon subunit SMART: Exonuclease~TIGRFAM: DNA polymerase III%2C epsilon subunit~KEGG: ajs:Ajs_2138 DNA polymerase III%2C epsilon subunit~PFAM: Exonuclease RNase T and DNA polymerase III gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2214 Alide_2215 Alide_2215 Alide_2215 2261423 2262535 + FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: ajs:Ajs_2136 FAD dependent oxidoreductase gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2215 Alide_2216 Alide_2216 Alide_2216 2262668 2262976 + protein of unknown function DUF883 ElaB PFAM: protein of unknown function DUF883 ElaB~KEGG: dia:Dtpsy_1647 protein of unknown function DUF883 ElaB gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2216 Alide_2217 Alide_2217 Alide_2217 2263001 2263405 + hypothetical protein KEGG: dia:Dtpsy_1648 hypothetical protein gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2217 Alide_2218 Alide_2218 Alide_2218 2263407 2263706 + hypothetical protein KEGG: ajs:Ajs_2133 hypothetical protein gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2218 Alide_2219 Alide_2219 Alide_2219 2263759 2264805 - dihydroorotate dehydrogenase TIGRFAM: dihydroorotate dehydrogenase~KEGG: ajs:Ajs_2132 dihydroorotate dehydrogenase 2~PFAM: dihydroorotate oxidase gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2219 Alide_2220 Alide_2220 Alide_2220 2264841 2265530 + ribose 5-phosphate isomerase TIGRFAM: ribose 5-phosphate isomerase~KEGG: ajs:Ajs_2131 ribose-5-phosphate isomerase A~PFAM: Ribose 5-phosphate isomerase gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2220 Alide_2221 Alide_2221 Alide_2221 2265527 2266168 - glutaredoxin PFAM: glutaredoxin~KEGG: dia:Dtpsy_1652 glutaredoxin gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2221 Alide_2222 Alide_2222 Alide_2222 2266290 2268323 - Oligopeptidase A KEGG: ajs:Ajs_2129 oligopeptidase A~PFAM: peptidase M3A and M3B thimet/oligopeptidase F gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2222 Alide_2223 Alide_2223 Alide_2223 2268361 2269209 - Methylenetetrahydrofolate dehydrogenase (NADP(+)) KEGG: dac:Daci_3983 bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/5%2C10-methylene-tetrahydrofolate cyclohydrolase~PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain%3B Tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2223 Alide_2224 Alide_2224 Alide_2224 2269292 2269918 - response regulator receiver KEGG: ctt:CtCNB1_2245 two component transcriptional regulator%2C LuxR~PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2224 Alide_2225 Alide_2225 Alide_2225 2269915 2272467 - PAS sensor protein TIGRFAM: PAS sensor protein~PFAM: ATP-binding region ATPase domain protein%3B PAS fold domain protein%3B histidine kinase A domain protein~KEGG: dia:Dtpsy_1656 PAS/PAC sensor signal transduction histidine kinase~SMART: ATP-binding region ATPase domain protein%3B PAS domain containing protein%3B PAC repeat-containing protein%3B histidine kinase A domain protein gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2225 Alide_2226 Alide_2226 Alide_2226 2272664 2275360 + 2-oxo-acid dehydrogenase E1 subunit%2C homodimeric type KEGG: dia:Dtpsy_1657 pyruvate dehydrogenase subunit E1~TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit%2C homodimeric type~PFAM: Transketolase domain-containing protein gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2226 Alide_2227 Alide_2227 Alide_2227 2275379 2277028 + pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase KEGG: dia:Dtpsy_1658 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase~TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase~PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes%3B biotin/lipoyl attachment domain-containing protein%3B E3 binding domain protein gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2227 Alide_2228 Alide_2228 Alide_2228 2277042 2278871 + dihydrolipoamide dehydrogenase KEGG: dia:Dtpsy_1659 dihydrolipoamide dehydrogenase~TIGRFAM: dihydrolipoamide dehydrogenase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B biotin/lipoyl attachment domain-containing protein%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2228 Alide_2229 Alide_2229 Alide_2229 2279023 2279304 + hypothetical protein KEGG: lth:KLTH0B01034g KLTH0B01034p gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2229 Alide_2230 Alide_2230 Alide_2230 2279294 2279668 + hypothetical protein KEGG: mgr:MGG_07539 hypothetical protein gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2230 Alide_2231 Alide_2231 Alide_2231 2280168 2281136 + hypothetical protein KEGG: aav:Aave_2466 hypothetical protein gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2231 Alide_2232 Alide_2232 Alide_2232 2281203 2282633 + filamentation induced by cAMP protein Fic PFAM: filamentation induced by cAMP protein Fic~KEGG: pna:Pnap_3558 filamentation induced by cAMP protein Fic gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2232 Alide_2233 Alide_2233 Alide_2233 2282693 2283592 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: rfr:Rfer_0879 LysR family transcriptional regulator gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2233 Alide_2234 Alide_2234 Alide_2234 2283699 2284400 + Dimethylmenaquinone methyltransferase PFAM: Dimethylmenaquinone methyltransferase~KEGG: cai:Caci_5818 dimethylmenaquinone methyltransferase gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2234 Alide_2235 Alide_2235 Alide_2235 2284397 2285761 + MmgE/PrpD family protein PFAM: MmgE/PrpD family protein~KEGG: rsh:Rsph17029_3583 MmgE/PrpD family protein gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2235 Alide_2236 Alide_2236 Alide_2236 2285779 2286768 + hypothetical protein KEGG: reu:Reut_B3949 hypothetical protein gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2236 Alide_2237 Alide_2237 Alide_2237 2286886 2287827 + hypothetical protein KEGG: dia:Dtpsy_1661 hypothetical protein gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2237 Alide_2238 Alide_2238 Alide_2238 2287957 2288390 - pseudogene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2238 Alide_2239 Alide_2239 Alide_2239 2288487 2289371 + 6-phosphogluconate dehydrogenase NAD-binding protein PFAM: 6-phosphogluconate dehydrogenase NAD-binding~KEGG: ajs:Ajs_2093 6-phosphogluconate dehydrogenase%2C NAD-binding gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2239 Alide_2240 Alide_2240 Alide_2240 2289375 2290145 - hypothetical protein KEGG: rpc:RPC_0065 OmpA/MotB gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2240 Alide_2241 Alide_2241 Alide_2241 2290088 2290594 - protein of unknown function DUF55 PFAM: protein of unknown function DUF55~KEGG: aav:Aave_2834 hypothetical protein gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2241 Alide_2242 Alide_2242 Alide_2242 2290591 2290842 - Transglycosylase-associated protein PFAM: Transglycosylase-associated protein~KEGG: aav:Aave_2831 transglycosylase-associated protein gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2242 Alide_2243 Alide_2243 Alide_2243 2291018 2291572 - NLP/P60 protein KEGG: ajs:Ajs_2091 NLP/P60 protein~manually curated~PFAM: NLP/P60 protein gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2243 Alide_2244 Alide_2244 Alide_2244 2291886 2293310 + amino acid permease-associated region protein PFAM: amino acid permease-associated region~KEGG: dac:Daci_3739 D-alanine/D-serine/glycine permease gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2244 Alide_2245 Alide_2245 Alide_2245 2293310 2293414 + hypothetical protein gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2245 Alide_2246 Alide_2246 Alide_2246 2293411 2294829 + drug resistance transporter%2C EmrB/QacA subfamily KEGG: dia:Dtpsy_1665 drug resistance transporter%2C EmrB/QacA subfamily~TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily~PFAM: major facilitator superfamily MFS_1 gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2246 Alide_2247 Alide_2247 Alide_2247 2295026 2298202 + diguanylate cyclase TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B CHASE domain protein%3B PAS fold domain protein~KEGG: dia:Dtpsy_1667 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s)~SMART: EAL domain protein%3B GGDEF domain containing protein%3B PAS domain containing protein%3B PAC repeat-containing protein gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2247 Alide_2248 Alide_2248 Alide_2248 2298217 2298546 + protein of unknown function UPF0060 PFAM: protein of unknown function UPF0060~KEGG: ajs:Ajs_2087 hypothetical protein gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2248 Alide_2249 Alide_2249 Alide_2249 2298701 2299360 - protein of unknown function DUF1555 PFAM: protein of unknown function DUF1555~KEGG: nar:Saro_2119 hypothetical protein gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2249 Alide_2250 Alide_2250 Alide_2250 2299629 2303153 + chromosome segregation protein SMC KEGG: dia:Dtpsy_1669 chromosome segregation protein SMC~TIGRFAM: chromosome segregation protein SMC~PFAM: SMC domain protein gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2250 Alide_2251 Alide_2251 Alide_2251 2303164 2304258 + ZipA FtsZ-binding region protein SMART: ZipA FtsZ-binding region protein~KEGG: dia:Dtpsy_1670 ZipA FtsZ-binding region gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2251 Alide_2252 Alide_2252 Alide_2252 2304270 2306423 + DNA ligase%2C NAD-dependent SMART: NAD-dependent DNA ligase %3B Helix-hairpin-helix DNA-binding class 1%3B BRCT domain protein~TIGRFAM: DNA ligase%2C NAD-dependent~KEGG: ajs:Ajs_2083 DNA ligase%2C NAD-dependent~PFAM: NAD-dependent DNA ligase adenylation%3B NAD-dependent DNA ligase OB-fold%3B helix-hairpin-helix motif%3B BRCT domain protein gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2252 Alide_2253 Alide_2253 Alide_2253 2306427 2307362 + Patatin PFAM: Patatin~KEGG: ajs:Ajs_2082 patatin gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2253 Alide_2254 Alide_2254 Alide_2254 2307550 2310033 + Peptidoglycan glycosyltransferase KEGG: ajs:Ajs_2081 glycosyl transferase family protein~PFAM: glycosyl transferase family 51%3B penicillin-binding protein transpeptidase gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2254 Alide_2255 Alide_2255 Alide_2255 2310044 2311240 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: dia:Dtpsy_1675 major facilitator superfamily MFS_1 gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2255 Alide_2256 Alide_2256 Alide_2256 2311233 2311781 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: dia:Dtpsy_1676 NUDIX hydrolase gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2256 Alide_2257 Alide_2257 Alide_2257 2311849 2312544 - fumarylacetoacetate (FAA) hydrolase PFAM: fumarylacetoacetate (FAA) hydrolase~KEGG: dia:Dtpsy_1677 fumarylacetoacetate (FAA) hydrolase gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2257 Alide_2258 Alide_2258 Alide_2258 2312658 2313323 + maleylacetoacetate isomerase KEGG: dia:Dtpsy_1678 maleylacetoacetate isomerase~TIGRFAM: maleylacetoacetate isomerase~PFAM: Glutathione S-transferase domain gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2258 Alide_2259 Alide_2259 Alide_2259 2313316 2314164 + protein of unknown function DUF152 PFAM: protein of unknown function DUF152~KEGG: dia:Dtpsy_1679 protein of unknown function DUF152 gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2259 Alide_2260 Alide_2260 Alide_2260 2314084 2314374 - hypothetical protein KEGG: dia:Dtpsy_1680 hypothetical protein gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2260 Alide_2261 Alide_2261 Alide_2261 2314525 2316234 + poly(R)-hydroxyalkanoic acid synthase%2C class I KEGG: dia:Dtpsy_1681 poly(R)-hydroxyalkanoic acid synthase%2C class I~TIGRFAM: poly(R)-hydroxyalkanoic acid synthase%2C class I~PFAM: Poly-beta-hydroxybutyrate polymerase domain protein%3B alpha/beta hydrolase fold gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2261 Alide_2262 Alide_2262 Alide_2262 2316314 2317492 + acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~KEGG: ajs:Ajs_2073 acetyl-CoA acetyltransferase~PFAM: Thiolase-like gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2262 Alide_2263 Alide_2263 Alide_2263 2317652 2318389 + acetoacetyl-CoA reductase KEGG: ajs:Ajs_2072 3-ketoacyl-(acyl-carrier-protein) reductase~TIGRFAM: acetoacetyl-CoA reductase~PFAM: short-chain dehydrogenase/reductase SDR gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2263 Alide_2264 Alide_2264 Alide_2264 2318818 2320746 - ABC transporter related protein KEGG: ajs:Ajs_2071 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2264 Alide_2265 Alide_2265 Alide_2265 2320802 2321788 - hypothetical protein KEGG: dac:Daci_3609 hypothetical protein gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2265 Alide_2266 Alide_2266 Alide_2266 2321846 2323075 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: dac:Daci_3610 acyl-CoA dehydrogenase domain-containing protein gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2266 Alide_2267 Alide_2267 Alide_2267 2323077 2324657 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: dac:Daci_3611 AMP-dependent synthetase and ligase gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2267 Alide_2268 Alide_2268 Alide_2268 2324762 2325766 - regulatory protein LysR PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: dac:Daci_3612 LysR family transcriptional regulator gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2268 Alide_2269 Alide_2269 Alide_2269 2325768 2326691 - protein-(glutamine-N5) methyltransferase%2C ribosomal protein L3-specific KEGG: ajs:Ajs_2070 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase~TIGRFAM: protein-(glutamine-N5) methyltransferase%2C ribosomal protein L3-specific%3B modification methylase%2C HemK family~PFAM: methyltransferase small gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2269 Alide_2270 Alide_2270 Alide_2270 2326688 2327866 - succinyl-diaminopimelate desuccinylase KEGG: ajs:Ajs_2069 succinyl-diaminopimelate desuccinylase~TIGRFAM: succinyl-diaminopimelate desuccinylase~PFAM: peptidase M20%3B peptidase dimerisation domain protein gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2270 Alide_2271 Alide_2271 Alide_2271 2327890 2329053 - twitching motility protein KEGG: dia:Dtpsy_1891 twitching motility protein~TIGRFAM: twitching motility protein~PFAM: type II secretion system protein E gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2271 Alide_2272 Alide_2272 Alide_2272 2329116 2329940 - 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase TIGRFAM: 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase~KEGG: dia:Dtpsy_1890 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2272 Alide_2273 Alide_2273 Alide_2273 2329948 2331150 - succinyldiaminopimelate transaminase KEGG: dia:Dtpsy_1889 succinyldiaminopimelate transaminase~TIGRFAM: succinyldiaminopimelate transaminase~PFAM: aminotransferase class I and II gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2273 Alide_2274 Alide_2274 Alide_2274 2331242 2331925 - electron transport complex%2C RnfABCDGE type%2C B subunit KEGG: dia:Dtpsy_1887 electron transport complex%2C RnfABCDGE type%2C B subunit~TIGRFAM: electron transport complex%2C RnfABCDGE type%2C B subunit~PFAM: Fe-S cluster domain protein gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2274 Alide_2275 Alide_2275 Alide_2275 2331941 2333257 - polyhydroxyalkanoate depolymerase%2C intracellular KEGG: ajs:Ajs_2063 polyhydroxyalkanoate depolymerase%2C intracellular~TIGRFAM: polyhydroxyalkanoate depolymerase%2C intracellular~PFAM: PHB de-polymerase domain protein gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2275 Alide_2276 Alide_2276 Alide_2276 2333433 2334491 - RelA/SpoT domain protein PFAM: RelA/SpoT domain protein~KEGG: dia:Dtpsy_1885 RelA/SpoT domain protein gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2276 Alide_2277 Alide_2277 Alide_2277 2334558 2335508 - TIM-barrel protein%2C yjbN family KEGG: dia:Dtpsy_1883 tRNA-dihydrouridine synthase A~TIGRFAM: TIM-barrel protein%2C yjbN family~PFAM: dihydrouridine synthase DuS gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2277 Alide_2278 Alide_2278 Alide_2278 2335793 2336254 + MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: pde:Pden_4680 dehydratase gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2278 Alide_2279 Alide_2279 Alide_2279 2336258 2336866 + regulatory protein TetR PFAM: regulatory protein TetR~KEGG: pde:Pden_4681 TetR family transcriptional regulator gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2279 Alide_2280 Alide_2280 Alide_2280 2337055 2338179 + Saccharopine dehydrogenase PFAM: Saccharopine dehydrogenase~KEGG: dia:Dtpsy_1846 saccharopine dehydrogenase gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2280 Alide_2281 Alide_2281 Alide_2281 2338176 2340011 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: dia:Dtpsy_1847 AMP-dependent synthetase and ligase gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2281 Alide_2282 Alide_2282 Alide_2282 2340138 2340773 - GntR domain protein KEGG: dia:Dtpsy_1848 transcriptional regulator%2C GntR family~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2282 Alide_2283 Alide_2283 Alide_2283 2340787 2341719 - pyruvate carboxyltransferase PFAM: pyruvate carboxyltransferase~KEGG: sno:Snov_3532 pyruvate carboxyltransferase gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2283 Alide_2284 Alide_2284 Alide_2284 2341722 2342687 - hypothetical protein KEGG: aav:Aave_3152 hypothetical protein gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2284 Alide_2285 Alide_2285 Alide_2285 2342725 2343948 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: hne:HNE_1079 L-carnitine dehydratase gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2285 Alide_2286 Alide_2286 Alide_2286 2344052 2345488 - Protein of unknown function DUF2083%2Ctranscriptional regulator KEGG: rpt:Rpal_2644 transcriptional regulator%2C XRE family~PFAM: Protein of unknown function DUF2083%2Ctranscriptional regulator%3B protein of unknown function DUF955%3B helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2286 Alide_2287 Alide_2287 Alide_2287 2345619 2347760 + methylmalonyl-CoA mutase%2C large subunit TIGRFAM: methylmalonyl-CoA mutase%2C large subunit~KEGG: dia:Dtpsy_1849 methylmalonyl-CoA mutase~PFAM: methylmalonyl-CoA mutase%3B cobalamin B12-binding domain protein gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2287 Alide_2288 Alide_2288 Alide_2288 2347777 2348784 + LAO/AO transport system ATPase KEGG: dia:Dtpsy_1850 arginine/ornithine transport system ATPase~TIGRFAM: LAO/AO transport system ATPase~PFAM: ArgK protein gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2288 Alide_2289 Alide_2289 Alide_2289 2348841 2350373 + carboxyl transferase PFAM: carboxyl transferase~KEGG: ajs:Ajs_2042 carboxyl transferase gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2289 Alide_2290 Alide_2290 Alide_2290 2350531 2352579 + acetyl-CoA carboxylase%2C biotin carboxylase KEGG: dia:Dtpsy_1853 carbamoyl-phosphate synthase L chain ATP-binding~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxylase~PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B biotin carboxylase domain protein%3B biotin/lipoyl attachment domain-containing protein gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2290 Alide_2291 Alide_2291 Alide_2291 2352638 2353099 + lactoylglutathione lyase KEGG: dia:Dtpsy_1854 lactoylglutathione lyase gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2291 Alide_2292 Alide_2292 Alide_2292 2353466 2354539 + biotin synthase SMART: Elongator protein 3/MiaB/NifB~TIGRFAM: biotin synthase~KEGG: ajs:Ajs_2045 biotin synthase~PFAM: biotin and thiamin synthesis associated%3B Radical SAM domain protein gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2292 Alide_2293 Alide_2293 Alide_2293 2354623 2355630 - twin-arginine translocation pathway signal KEGG: pol:Bpro_1449 twin-arginine translocation pathway signal gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2293 Alide_2294 Alide_2294 Alide_2294 2355752 2356432 + response regulator receiver KEGG: pol:Bpro_1450 two component transcriptional regulator~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2294 Alide_2295 Alide_2295 Alide_2295 2356398 2357786 + Two-component sensor kinase domain-containing protein KEGG: pol:Bpro_1451 histidine kinase~PFAM: Two-component sensor kinase domain-containing protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2295 Alide_2296 Alide_2296 Alide_2296 2357783 2358754 + hypothetical protein KEGG: pol:Bpro_1452 hypothetical protein gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2296 Alide_2297 Alide_2297 Alide_2297 2358758 2359204 - OsmC family protein PFAM: OsmC family protein~KEGG: pna:Pnap_2833 OsmC family protein gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2297 Alide_2298 Alide_2298 Alide_2298 2359201 2359494 - Rhodanese domain protein KEGG: pna:Pnap_2832 rhodanese domain-containing protein~PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2298 Alide_2299 Alide_2299 Alide_2299 2359592 2359801 - hypothetical protein KEGG: pna:Pnap_2829 hypothetical protein gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2299 Alide_2300 Alide_2300 Alide_2300 2359829 2360965 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: alv:Alvin_1195 FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2300 Alide_2301 Alide_2301 Alide_2301 2360962 2362254 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: pna:Pnap_2831 FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2301 Alide_2302 Alide_2302 Alide_2302 2362297 2363718 - outer membrane efflux protein PFAM: outer membrane efflux protein~KEGG: pna:Pnap_2830 TolC family type I secretion outer membrane protein gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2302 Alide_2303 Alide_2303 Alide_2303 2363715 2366948 - acriflavin resistance protein PFAM: acriflavin resistance protein~KEGG: pna:Pnap_2828 acriflavin resistance protein gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2303 Alide_2304 Alide_2304 Alide_2304 2366950 2367990 - efflux transporter%2C RND family%2C MFP subunit KEGG: pna:Pnap_2827 RND family efflux transporter MFP subunit~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2304 Alide_2305 Alide_2305 Alide_2305 2368090 2368428 + regulatory protein ArsR KEGG: pna:Pnap_2826 regulatory protein%2C ArsR~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2305 Alide_2306 Alide_2306 Alide_2306 2368437 2368650 - pseudogene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2306 Alide_2307 Alide_2307 Alide_2307 2368830 2369615 - HpcH/HpaI aldolase PFAM: HpcH/HpaI aldolase~KEGG: tjr:TherJR_2256 2-dehydro-3-deoxyglucarate aldolase gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2307 Alide_2308 Alide_2308 Alide_2308 2369651 2370349 - hypothetical protein KEGG: rpa:RPA2008 hypothetical protein gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2308 Alide_2309 Alide_2309 Alide_2309 2370359 2371375 - hypothetical protein KEGG: cti:RALTA_B0210 conserved hypothetical protein%3B putative periplasmic receptor protein%2C UPF0065 gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2309 Alide_2310 Alide_2310 Alide_2310 2371400 2372392 - putative secreted protein KEGG: bpt:Bpet3225 putative secreted protein gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2310 Alide_2311 Alide_2311 Alide_2311 2372407 2373447 - periplasmic binding protein/LacI transcriptional regulator KEGG: bxe:Bxe_C0307 LacI family transcription regulator~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2311 Alide_2312 Alide_2312 Alide_2312 2373444 2374205 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bph:Bphy_7421 short-chain dehydrogenase/reductase SDR gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2312 Alide_2313 Alide_2313 Alide_2313 2374208 2375527 - histidinol dehydrogenase TIGRFAM: histidinol dehydrogenase~KEGG: bxe:Bxe_C0309 histidinol dehydrogenase~PFAM: Histidinol dehydrogenase gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2313 Alide_2314 Alide_2314 Alide_2314 2375754 2376359 + Methyltransferase type 11 PFAM: Methyltransferase type 11~KEGG: ajs:Ajs_2324 methyltransferase type 11 gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2314 Alide_2315 Alide_2315 Alide_2315 2376370 2377038 + DTW domain containing protein PFAM: DTW domain containing protein~KEGG: dia:Dtpsy_1758 DTW domain containing protein gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2315 Alide_2316 Alide_2316 Alide_2316 2377055 2377636 + uncharacterized peroxidase-related enzyme KEGG: dia:Dtpsy_1757 uncharacterized peroxidase-related enzyme~TIGRFAM: uncharacterized peroxidase-related enzyme%3B alkylhydroperoxidase like protein%2C AhpD family~PFAM: Carboxymuconolactone decarboxylase gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2316 Alide_2317 Alide_2317 Alide_2317 2377701 2379437 - sulfatase PFAM: sulfatase%3B protein of unknown function DUF1705~KEGG: ajs:Ajs_1955 sulfatase gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2317 Alide_2318 Alide_2318 Alide_2318 2379442 2380170 - PAP2 (acid phosphatase) superfamily protein-like protein KEGG: dia:Dtpsy_1755 PAP2 (acid phosphatase) superfamily protein-like protein gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2318 Alide_2319 Alide_2319 Alide_2319 2380304 2380978 + response regulator receiver KEGG: dia:Dtpsy_1754 two component transcriptional regulator%2C winged helix family~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2319 Alide_2320 Alide_2320 Alide_2320 2380982 2382349 + ATP-binding region ATPase domain protein KEGG: dia:Dtpsy_1753 histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2320 Alide_2321 Alide_2321 Alide_2321 2382365 2383135 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: bbr:BB4306 putative enoyl-CoA hydratase/isomerase family protein gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2321 Alide_2322 Alide_2322 Alide_2322 2383140 2384102 - hypothetical protein KEGG: bbr:BB4305 hypothetical protein gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2322 Alide_2323 Alide_2323 Alide_2323 2384144 2385151 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: bbr:BB4304 putative zinc-binding dehydrogenase gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2323 Alide_2324 Alide_2324 Alide_2324 2385151 2386368 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: bbr:BB4303 putative racemase gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2324 Alide_2325 Alide_2325 Alide_2325 2386506 2387675 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: bbr:BB1199 acyl-CoA dehydrogenase gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2325 Alide_2326 Alide_2326 Alide_2326 2387692 2388747 + hypothetical protein KEGG: bbr:BB1197 hypothetical protein gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2326 Alide_2327 Alide_2327 Alide_2327 2388765 2389901 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: cti:RALTA_B0352 putative acyl-CoA transferases/carnitine dehydratase gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2327 Alide_2328 Alide_2328 Alide_2328 2390053 2390694 + regulatory protein TetR PFAM: regulatory protein TetR~KEGG: bbr:BB4302 TetR family transcriptional regulator gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2328 Alide_2329 Alide_2329 Alide_2329 2390844 2392559 + Electron-transferring-flavoprotein dehydrogenase KEGG: dia:Dtpsy_1751 electron-transferring-flavoprotein dehydrogenase~PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase%3B FAD dependent oxidoreductase gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2329 Alide_2330 Alide_2330 Alide_2330 2392798 2393766 + protein of unknown function DUF534 PFAM: protein of unknown function DUF534~KEGG: ajs:Ajs_1949 hypothetical protein gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2330 Alide_2331 Alide_2331 Alide_2331 2393848 2394735 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dac:Daci_4312 inner-membrane translocator gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2331 Alide_2332 Alide_2332 Alide_2332 2394748 2395542 + ABC transporter related protein KEGG: dia:Dtpsy_1748 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2332 Alide_2333 Alide_2333 Alide_2333 2395717 2397642 - sigma-54 factor interaction domain-containing protein KEGG: azo:azo3875 sigma-54-dependent transcriptional regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B GAF domain protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2333 Alide_2334 Alide_2334 Alide_2334 2397754 2398629 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: vap:Vapar_5337 alpha/beta hydrolase fold protein gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2334 Alide_2335 Alide_2335 Alide_2335 2398643 2400223 - Gluconate 2-dehydrogenase (acceptor) KEGG: azo:azo3873 putative glucase dehydrogenase alpha subunit~PFAM: glucose-methanol-choline oxidoreductase%3B monooxygenase FAD-binding gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2335 Alide_2336 Alide_2336 Alide_2336 2400256 2400837 - hypothetical protein KEGG: azo:azo3872 hypothetical protein gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2336 Alide_2337 Alide_2337 Alide_2337 2400894 2401607 - biotin/lipoate A/B protein ligase PFAM: biotin/lipoate A/B protein ligase~KEGG: azo:azo3871 putative lipoate protein ligase gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2337 Alide_2338 Alide_2338 Alide_2338 2401604 2402317 - Dihydrolipoyllysine-residue acetyltransferase KEGG: azo:azo3870 hypothetical protein~PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2338 Alide_2339 Alide_2339 Alide_2339 2402314 2402559 - biotin/lipoyl attachment domain-containing protein PFAM: biotin/lipoyl attachment domain-containing protein~KEGG: rfr:Rfer_3967 biotin/lipoyl attachment gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2339 Alide_2340 Alide_2340 Alide_2340 2402556 2403593 - Transketolase central region protein PFAM: Transketolase central region%3B Transketolase domain-containing protein~KEGG: rfr:Rfer_3966 transketolase gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2340 Alide_2341 Alide_2341 Alide_2341 2403619 2404626 - Pyruvate dehydrogenase (acetyl-transferring) KEGG: azo:azo3867 acetoin dehydrogenase%2C alpha subunit~PFAM: dehydrogenase E1 component gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2341 Alide_2342 Alide_2342 Alide_2342 2404962 2405423 - Transcription regulator AsnC-type-like protein KEGG: dia:Dtpsy_1745 transcriptional regulator%2C AsnC family~PFAM: Transcription regulator AsnC-type-like~SMART: Transcription regulator AsnC-type gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2342 Alide_2343 Alide_2343 Alide_2343 2405709 2406680 + TRAP dicarboxylate transporter%2C DctP subunit KEGG: ajs:Ajs_1941 TRAP dicarboxylate transporter%2C DctP subunit~TIGRFAM: TRAP dicarboxylate transporter%2C DctP subunit~PFAM: Extracellular solute-binding protein%2C family 7 gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2343 Alide_2344 Alide_2344 Alide_2344 2406756 2407250 + Tripartite ATP-independent periplasmic transporter DctQ component PFAM: Tripartite ATP-independent periplasmic transporter DctQ component~KEGG: dia:Dtpsy_1743 tripartite ATP-independent periplasmic transporter DctQ component gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2344 Alide_2345 Alide_2345 Alide_2345 2407247 2408524 + TRAP dicarboxylate transporter%2C DctM subunit KEGG: dia:Dtpsy_1742 TRAP dicarboxylate transporter%2C DctM subunit~TIGRFAM: TRAP dicarboxylate transporter%2C DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2345 Alide_2346 Alide_2346 Alide_2346 2408543 2409610 - metallo-beta-lactamase family protein KEGG: bpt:Bpet1117 metallo-beta-lactamase family protein gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2346 Alide_2347 Alide_2347 Alide_2347 2409941 2411074 + glycine cleavage system T protein KEGG: aav:Aave_3145 glycine cleavage system T protein~TIGRFAM: glycine cleavage system T protein~PFAM: glycine cleavage T protein (aminomethyl transferase)%3B Glycine cleavage T-protein barrel gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2347 Alide_2348 Alide_2348 Alide_2348 2411161 2411535 + glycine cleavage system H protein KEGG: dia:Dtpsy_1740 glycine cleavage system H protein~TIGRFAM: glycine cleavage system H protein~PFAM: glycine cleavage H-protein gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2348 Alide_2349 Alide_2349 Alide_2349 2411665 2414553 + glycine dehydrogenase KEGG: dia:Dtpsy_1739 glycine dehydrogenase~TIGRFAM: glycine dehydrogenase~PFAM: Glycine cleavage system P-protein-like gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2349 Alide_2350 Alide_2350 Alide_2350 2414712 2414972 + protein of unknown function DUF156 PFAM: protein of unknown function DUF156~KEGG: ajs:Ajs_2799 hypothetical protein gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2350 Alide_2351 Alide_2351 Alide_2351 2414996 2416111 + S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase KEGG: dia:Dtpsy_2290 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase~TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2351 Alide_2352 Alide_2352 Alide_2352 2416221 2417081 + S-formylglutathione hydrolase TIGRFAM: S-formylglutathione hydrolase~KEGG: ajs:Ajs_2801 carboxylesterase~PFAM: esterase gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2352 Alide_2353 Alide_2353 Alide_2353 2417092 2417271 - hypothetical protein gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2353 Alide_2354 Alide_2354 Alide_2354 2417345 2418232 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ctt:CtCNB1_2228 transcriptional regulator%2C LysR family gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2354 Alide_2355 Alide_2355 Alide_2355 2418229 2419347 - Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: ajs:Ajs_2803 radical SAM domain-containing protein gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2355 Alide_2356 Alide_2356 Alide_2356 2419615 2420022 + transcription elongation factor GreA/GreB domain-containing protein PFAM: transcription elongation factor GreA/GreB domain-containing protein~KEGG: ajs:Ajs_2805 GreA/GreB family elongation factor gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2356 Alide_2357 Alide_2357 Alide_2357 2420069 2421226 - acyltransferase 3 PFAM: acyltransferase 3~KEGG: dia:Dtpsy_2295 acyltransferase 3 gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2357 Alide_2358 Alide_2358 Alide_2358 2421293 2422249 - 2-nitropropane dioxygenase NPD PFAM: 2-nitropropane dioxygenase NPD~KEGG: ajs:Ajs_2807 2-nitropropane dioxygenase%2C NPD gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2358 Alide_2359 Alide_2359 Alide_2359 2422328 2424118 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: dia:Dtpsy_2297 acyl-CoA dehydrogenase domain protein gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2359 Alide_2360 Alide_2360 Alide_2360 2424202 2425134 - Electron transfer flavoprotein alpha subunit PFAM: Electron transfer flavoprotein alpha subunit %3B Electron transfer flavoprotein alpha/beta-subunit~KEGG: dia:Dtpsy_2298 electron transfer flavoprotein alpha subunit gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2360 Alide_2361 Alide_2361 Alide_2361 2425152 2425901 - Electron transfer flavoprotein alpha/beta-subunit PFAM: Electron transfer flavoprotein alpha/beta-subunit~KEGG: dia:Dtpsy_3012 electron transfer flavoprotein alpha/beta-subunit gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2361 Alide_2362 Alide_2362 Alide_2362 2426073 2426852 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: dia:Dtpsy_2301 enoyl-CoA hydratase/isomerase gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2362 Alide_2363 Alide_2363 Alide_2363 2426867 2427826 - histone deacetylase superfamily PFAM: histone deacetylase superfamily~KEGG: ajs:Ajs_2813 histone deacetylase superfamily protein gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2363 Alide_2364 Alide_2364 Alide_2364 2427865 2428785 + ATPase associated with various cellular activities AAA_3 KEGG: dia:Dtpsy_2303 ATPase associated with various cellular activities AAA_3~PFAM: ATPase associated with various cellular activities AAA_3~SMART: AAA ATPase gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2364 Alide_2365 Alide_2365 Alide_2365 2428791 2429810 + protein of unknown function DUF58 PFAM: protein of unknown function DUF58~KEGG: ajs:Ajs_2815 hypothetical protein gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2365 Alide_2366 Alide_2366 Alide_2366 2429890 2431947 + transglutaminase domain-containing protein KEGG: ajs:Ajs_2816 transglutaminase domain-containing protein~PFAM: transglutaminase domain-containing protein~SMART: transglutaminase domain-containing protein gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2366 Alide_2367 Alide_2367 Alide_2367 2431944 2433014 + lytic murein transglycosylase B TIGRFAM: lytic murein transglycosylase B~KEGG: dia:Dtpsy_2306 lytic murein transglycosylase B gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2367 Alide_2368 Alide_2368 Alide_2368 2433024 2434028 - Transketolase central region protein PFAM: Transketolase central region%3B Transketolase domain-containing protein~KEGG: lch:Lcho_4275 transketolase central region gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2368 Alide_2369 Alide_2369 Alide_2369 2434043 2434870 - Transketolase domain-containing protein PFAM: Transketolase domain-containing protein~KEGG: dac:Daci_0728 transketolase domain-containing protein gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2369 Alide_2370 Alide_2370 Alide_2370 2434893 2436152 - TRAP dicarboxylate transporter%2C DctM subunit KEGG: pol:Bpro_1457 TRAP dicarboxylate transporter-DctM subunit~TIGRFAM: TRAP dicarboxylate transporter%2C DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2370 Alide_2371 Alide_2371 Alide_2371 2436149 2436649 - Tripartite ATP-independent periplasmic transporter DctQ component PFAM: Tripartite ATP-independent periplasmic transporter DctQ component~KEGG: lch:Lcho_0406 tripartite ATP-independent periplasmic transporter DctQ gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2371 Alide_2372 Alide_2372 Alide_2372 2436704 2437687 - TRAP dicarboxylate transporter%2C DctP subunit KEGG: pol:Bpro_1455 TRAP dicarboxylate transporter%2C DctP subunit~TIGRFAM: TRAP dicarboxylate transporter%2C DctP subunit~PFAM: Extracellular solute-binding protein%2C family 7 gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2372 Alide_2373 Alide_2373 Alide_2373 2437724 2438473 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: lch:Lcho_0404 short-chain dehydrogenase/reductase SDR gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2373 Alide_2374 Alide_2374 Alide_2374 2438614 2439492 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: pol:Bpro_1453 LysR family transcriptional regulator gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2374 Alide_2375 Alide_2375 Alide_2375 2439645 2441627 + transketolase KEGG: hse:Hsero_0506 transketolase~TIGRFAM: transketolase~PFAM: Transketolase domain-containing protein%3B Transketolase central region gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2375 Alide_2376 Alide_2376 Alide_2376 2441642 2442604 + D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region~KEGG: bxe:Bxe_B0983 putative 2-hydroxyacid dehydrogenase gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2376 Alide_2377 Alide_2377 Alide_2377 2442624 2443538 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dia:Dtpsy_2307 transcriptional regulator%2C LysR family gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2377 Alide_2378 Alide_2378 Alide_2378 2443653 2444759 + Uncharacterized protein family UPF0324 PFAM: Uncharacterised protein family UPF0324~KEGG: dia:Dtpsy_2308 hypothetical protein gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2378 Alide_2379 Alide_2379 Alide_2379 2444761 2446038 - ABC-type branched-chain amino acid transporter family periplasmic ligand binding subunit KEGG: dia:Dtpsy_2309 putative transporter signal peptide protein gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2379 Alide_2380 Alide_2380 Alide_2380 2446071 2446850 - Protein of unknown function DUF2242 PFAM: Protein of unknown function DUF2242~KEGG: dia:Dtpsy_2310 putative lipoprotein gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2380 Alide_2381 Alide_2381 Alide_2381 2446996 2448207 - protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: dia:Dtpsy_2312 protein of unknown function DUF214 gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2381 Alide_2382 Alide_2382 Alide_2382 2448204 2448959 - ABC transporter related protein KEGG: dia:Dtpsy_2313 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2382 Alide_2383 Alide_2383 Alide_2383 2448956 2450305 - efflux transporter%2C RND family%2C MFP subunit KEGG: dia:Dtpsy_2314 efflux transporter%2C RND family%2C MFP subunit~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2383 Alide_2384 Alide_2384 Alide_2384 2450302 2451708 - RND efflux system%2C outer membrane lipoprotein%2C NodT family KEGG: dia:Dtpsy_2315 RND efflux system%2C outer membrane lipoprotein%2C NodT family~TIGRFAM: RND efflux system%2C outer membrane lipoprotein%2C NodT family~PFAM: outer membrane efflux protein gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2384 Alide_2385 Alide_2385 Alide_2385 2451831 2452874 - metalloendopeptidase%2C glycoprotease family TIGRFAM: metalloendopeptidase%2C glycoprotease family~KEGG: dia:Dtpsy_2317 putative DNA-binding/iron metalloprotein/AP endonuclease~PFAM: peptidase M22 glycoprotease gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2385 Alide_2386 Alide_2386 Alide_2386 2452897 2453334 - CBS domain containing protein KEGG: dia:Dtpsy_2323 putative signal transduction protein with CBS domains~PFAM: CBS domain containing protein~SMART: CBS domain containing protein gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2386 Alide_2387 Alide_2387 Alide_2387 2453419 2454060 - calcium-binding EF-hand-containing protein KEGG: dia:Dtpsy_2324 calcium-binding EF-hand-containing protein gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2387 Alide_2388 Alide_2388 Alide_2388 2454463 2455701 + efflux transporter%2C RND family%2C MFP subunit KEGG: aav:Aave_2112 RND family efflux transporter MFP subunit~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2388 Alide_2389 Alide_2389 Alide_2389 2455711 2458854 + transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family KEGG: dia:Dtpsy_2326 transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family~TIGRFAM: transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family~PFAM: acriflavin resistance protein gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2389 Alide_2390 Alide_2390 Alide_2390 2458851 2460359 + RND efflux system%2C outer membrane lipoprotein%2C NodT family KEGG: dia:Dtpsy_2327 RND efflux system%2C outer membrane lipoprotein%2C NodT family~TIGRFAM: RND efflux system%2C outer membrane lipoprotein%2C NodT family~PFAM: outer membrane efflux protein gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2390 Alide_2391 Alide_2391 Alide_2391 2460613 2463063 + nitrite reductase (NAD(P)H)%2C large subunit KEGG: ajs:Ajs_2839 assimilatory nitrite reductase (NAD(P)H) large subunit precursor~TIGRFAM: nitrite reductase [NAD(P)H]%2C large subunit~PFAM: nitrite and sulphite reductase 4Fe-4S region%3B FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B BFD domain protein [2Fe-2S]-binding domain protein%3B nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2391 Alide_2392 Alide_2392 Alide_2392 2463136 2463513 + nitrite reductase (NAD(P)H)%2C small subunit KEGG: ajs:Ajs_2840 assimilatory nitrite reductase (NAD(P)H) small subunit~TIGRFAM: nitrite reductase [NAD(P)H]%2C small subunit~PFAM: Rieske [2Fe-2S] iron-sulphur domain gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2392 Alide_2393 Alide_2393 Alide_2393 2463510 2466302 + molybdopterin oxidoreductase PFAM: molybdopterin oxidoreductase%3B molybdopterin oxidoreductase Fe4S4 region%3B molydopterin dinucleotide-binding region%3B BFD domain protein [2Fe-2S]-binding domain protein~KEGG: ajs:Ajs_2841 assimilatory nitrate reductase (NADH) alpha subunit apoprotein gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2393 Alide_2394 Alide_2394 Alide_2394 2466353 2467576 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: pol:Bpro_3273 major facilitator transporter gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2394 Alide_2395 Alide_2395 Alide_2395 2467615 2468190 - SNARE associated Golgi protein-like protein PFAM: SNARE associated Golgi protein~KEGG: net:Neut_2429 hypothetical protein gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2395 Alide_2396 Alide_2396 Alide_2396 2468326 2469294 + Glycosyl transferase%2C family 3-like protein PFAM: Glycosyl transferase%2C family 3-like~KEGG: ajs:Ajs_2842 glycosyl transferase family protein gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2396 Alide_2397 Alide_2397 Alide_2397 2469291 2470061 + uroporphyrin-III C-methyltransferase KEGG: dia:Dtpsy_2332 uroporphyrin-III C-methyltransferase~TIGRFAM: uroporphyrin-III C-methyltransferase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2397 Alide_2398 Alide_2398 Alide_2398 2470062 2470565 - thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: dia:Dtpsy_2333 thioesterase superfamily protein gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2398 Alide_2399 Alide_2399 Alide_2399 2470606 2471880 + HI0933 family protein PFAM: HI0933 family protein~KEGG: dia:Dtpsy_2335 HI0933 family protein gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2399 Alide_2400 Alide_2400 Alide_2400 2471991 2473205 + NnrS family protein PFAM: NnrS family protein~KEGG: ajs:Ajs_2847 NnrS family protein gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2400 Alide_2401 Alide_2401 Alide_2401 2473248 2473532 + hypothetical protein KEGG: dia:Dtpsy_2337 hypothetical protein gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2401 Alide_2402 Alide_2402 Alide_2402 2473602 2474588 - hypothetical protein KEGG: reu:Reut_A1607 hypothetical protein gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2402 Alide_2403 Alide_2403 Alide_2403 2474682 2476184 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: bxe:Bxe_C0851 acyl-CoA synthetase gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2403 Alide_2404 Alide_2404 Alide_2404 2476238 2477410 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: bxe:Bxe_C0852 putative acyl-CoA dehydrogenase gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2404 Alide_2405 Alide_2405 Alide_2405 2477477 2478451 - hypothetical protein KEGG: aav:Aave_3937 hypothetical protein gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2405 Alide_2406 Alide_2406 Alide_2406 2478529 2479932 - dihydrolipoamide dehydrogenase KEGG: bxe:Bxe_C0853 dihydrolipoamide dehydrogenase~TIGRFAM: dihydrolipoamide dehydrogenase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2406 Alide_2407 Alide_2407 Alide_2407 2479943 2481151 - Dihydrolipoyllysine-residue acetyltransferase KEGG: bxe:Bxe_C0854 dihydrolipoamide acyltransferase (E2) component of 2-oxoacid dehydrogenase complexes~PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes%3B E3 binding domain protein%3B biotin/lipoyl attachment domain-containing protein gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2407 Alide_2408 Alide_2408 Alide_2408 2481155 2481946 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: bxe:Bxe_C0855 short chain enoyl-CoA hydratase gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2408 Alide_2409 Alide_2409 Alide_2409 2481972 2482952 - Transketolase central region protein PFAM: Transketolase central region%3B Transketolase domain-containing protein~KEGG: bxe:Bxe_C0856 putative 2-oxo acid dehydrogenase beta subunit gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2409 Alide_2410 Alide_2410 Alide_2410 2482949 2483950 - Pyruvate dehydrogenase (acetyl-transferring) KEGG: bxe:Bxe_C0857 putative 2-oxo acid dehydrogenase alpha subunit~PFAM: dehydrogenase E1 component gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2410 Alide_2411 Alide_2411 Alide_2411 2484005 2484403 - MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: bxe:Bxe_C0858 putative dehydratase gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2411 Alide_2412 Alide_2412 Alide_2412 2484400 2484807 - hypothetical protein KEGG: bbr:BB4714 hypothetical protein gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2412 Alide_2413 Alide_2413 Alide_2413 2484804 2485223 - protein of unknown function DUF35 PFAM: protein of unknown function DUF35~KEGG: bxe:Bxe_C0859 hypothetical protein gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2413 Alide_2414 Alide_2414 Alide_2414 2485225 2486376 - hypothetical protein KEGG: bbr:BB4712 hypothetical protein gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2414 Alide_2415 Alide_2415 Alide_2415 2486387 2487535 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: bbr:BB4710 acyl-CoA dehydrogenase gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2415 Alide_2416 Alide_2416 Alide_2416 2487676 2489787 + CoA-binding domain protein PFAM: CoA-binding domain protein~KEGG: bbr:BB4708 putative pimeloyl-CoA synthetase gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2416 Alide_2417 Alide_2417 Alide_2417 2489933 2490727 + regulatory protein IclR KEGG: bxe:Bxe_C0866 IclR family transcriptional regulator~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2417 Alide_2418 Alide_2418 Alide_2418 2490782 2491336 - FeS assembly SUF system protein SufT KEGG: dia:Dtpsy_2338 FeS assembly SUF system protein SufT~TIGRFAM: FeS assembly SUF system protein SufT~PFAM: protein of unknown function DUF59 gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2418 Alide_2419 Alide_2419 Alide_2419 2491333 2491797 - SUF system FeS assembly protein%2C NifU family KEGG: dia:Dtpsy_2339 SUF system FeS assembly protein%2C NifU family~TIGRFAM: SUF system FeS assembly protein%2C NifU family~PFAM: nitrogen-fixing NifU domain protein gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2419 Alide_2420 Alide_2420 Alide_2420 2491794 2493074 - cysteine desulfurase%2C SufS subfamily KEGG: ajs:Ajs_2851 aminotransferase%2C class V~TIGRFAM: cysteine desulfurase%2C SufS subfamily~PFAM: aminotransferase class V gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2420 Alide_2421 Alide_2421 Alide_2421 2493067 2494302 - SufBD protein PFAM: SufBD protein~KEGG: ajs:Ajs_2852 SufBD protein gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2421 Alide_2422 Alide_2422 Alide_2422 2494307 2495080 - FeS assembly ATPase SufC TIGRFAM: FeS assembly ATPase SufC~PFAM: ABC transporter related~KEGG: dia:Dtpsy_2342 FeS assembly ATPase SufC~SMART: AAA ATPase gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2422 Alide_2423 Alide_2423 Alide_2423 2495151 2496653 - FeS assembly protein SufB KEGG: dia:Dtpsy_2343 cysteine desulfurase activator complex subunit SufB~TIGRFAM: FeS assembly protein SufB~PFAM: SufBD protein gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2423 Alide_2424 Alide_2424 Alide_2424 2496932 2497144 + ribosomal protein S21 KEGG: vap:Vapar_3540 30S ribosomal protein S21~TIGRFAM: ribosomal protein S21~PFAM: ribosomal protein S21 gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2424 Alide_2425 Alide_2425 Alide_2425 2497230 2497676 + GatB/YqeY domain-containing protein KEGG: aav:Aave_2091 GatB/YqeY domain-containing protein gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2425 Alide_2426 Alide_2426 Alide_2426 2497690 2499081 - metal-dependent phosphohydrolase HD sub domain protein PFAM: metal-dependent phosphohydrolase HD sub domain~KEGG: ajs:Ajs_1963 metal dependent phosphohydrolase gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2426 Alide_2427 Alide_2427 Alide_2427 2499232 2499870 - 3-oxoacid CoA-transferase%2C B subunit TIGRFAM: 3-oxoacid CoA-transferase%2C B subunit~KEGG: dia:Dtpsy_1763 3-oxoacid CoA-transferase%2C B subunit~PFAM: coenzyme A transferase gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2427 Alide_2428 Alide_2428 Alide_2428 2499874 2500581 - 3-oxoacid CoA-transferase%2C A subunit TIGRFAM: 3-oxoacid CoA-transferase%2C A subunit~KEGG: pna:Pnap_2658 3-oxoacid CoA-transferase%2C A subunit~PFAM: coenzyme A transferase gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2428 Alide_2429 Alide_2429 Alide_2429 2500665 2501210 + PAS sensor protein TIGRFAM: PAS sensor protein~PFAM: regulatory protein LuxR%3B PAS fold domain protein~KEGG: dia:Dtpsy_1761 transcriptional regulator%2C LuxR family~SMART: regulatory protein LuxR%3B PAS domain containing protein gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2429 Alide_2430 Alide_2430 Alide_2430 2501348 2502589 + acyltransferase 3 PFAM: acyltransferase 3~KEGG: ajs:Ajs_2326 acyltransferase 3 gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2430 Alide_2431 Alide_2431 Alide_2431 2502816 2504162 + amino-acid N-acetyltransferase KEGG: ajs:Ajs_2327 N-acetylglutamate synthase~TIGRFAM: amino-acid N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase%3B aspartate/glutamate/uridylate kinase gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2431 Alide_2432 Alide_2432 Alide_2432 2504640 2504987 + Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP~KEGG: bam:Bamb_3393 endoribonuclease L-PSP gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2432 Alide_2433 Alide_2433 Alide_2433 2505014 2506258 + D-amino-acid dehydrogenase KEGG: bam:Bamb_3394 FAD dependent oxidoreductase~PFAM: FAD dependent oxidoreductase gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2433 Alide_2434 Alide_2434 Alide_2434 2506255 2507031 + Asp/Glu/hydantoin racemase PFAM: Asp/Glu/hydantoin racemase~KEGG: vei:Veis_4472 Asp/Glu racemase gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2434 Alide_2435 Alide_2435 Alide_2435 2507093 2508226 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: vei:Veis_4471 extracellular ligand-binding receptor gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2435 Alide_2436 Alide_2436 Alide_2436 2508282 2509175 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: vei:Veis_4470 inner-membrane translocator gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2436 Alide_2437 Alide_2437 Alide_2437 2509168 2510055 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: vei:Veis_4469 inner-membrane translocator gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2437 Alide_2438 Alide_2438 Alide_2438 2510052 2510834 + ABC transporter related protein KEGG: vei:Veis_4468 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2438 Alide_2439 Alide_2439 Alide_2439 2510834 2511553 + ABC transporter related protein KEGG: vei:Veis_4467 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2439 Alide_2440 Alide_2440 Alide_2440 2511577 2512698 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: bcm:Bcenmc03_6241 extracellular ligand-binding receptor gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2440 Alide_2441 Alide_2441 Alide_2441 2512763 2513671 - dihydrodipicolinate synthase KEGG: tbd:Tbd_1098 dihydrodipicolinate synthase~TIGRFAM: dihydrodipicolinate synthase~PFAM: dihydrodipicolinate synthetase gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2441 Alide_2442 Alide_2442 Alide_2442 2513790 2517236 - Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain protein PFAM: Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain~KEGG: xau:Xaut_0390 indolepyruvate ferredoxin oxidoreductase gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2442 Alide_2443 Alide_2443 Alide_2443 2517453 2518235 + GntR domain protein KEGG: vei:Veis_4063 GntR family transcriptional regulator~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2443 Alide_2444 Alide_2444 Alide_2444 2518263 2519888 - GAF domain protein KEGG: dar:Daro_3357 hypothetical protein~PFAM: GAF domain protein~SMART: GAF domain protein%3B metal-dependent phosphohydrolase HD region gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2444 Alide_2445 Alide_2445 Alide_2445 2520004 2520513 - disulfide bond formation protein DsbB PFAM: Disulphide bond formation protein DsbB~KEGG: dia:Dtpsy_1523 disulphide bond formation protein DsbB gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2445 Alide_2446 Alide_2446 Alide_2446 2520575 2521702 - sulfate ABC transporter%2C ATPase subunit TIGRFAM: sulfate ABC transporter%2C ATPase subunit~PFAM: ABC transporter related~KEGG: dia:Dtpsy_1522 sulfate ABC transporter%2C ATPase subunit~SMART: AAA ATPase gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2446 Alide_2447 Alide_2447 Alide_2447 2521737 2522630 - sulfate ABC transporter%2C inner membrane subunit CysW KEGG: ajs:Ajs_2336 sulfate ABC transporter%2C inner membrane subunit CysW~TIGRFAM: sulfate ABC transporter%2C inner membrane subunit CysW%3B sulfate ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2447 Alide_2448 Alide_2448 Alide_2448 2522627 2523493 - sulfate ABC transporter%2C inner membrane subunit CysT KEGG: dia:Dtpsy_1520 sulfate ABC transporter%2C inner membrane subunit CysT~TIGRFAM: sulfate ABC transporter%2C inner membrane subunit CysT%3B sulfate ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2448 Alide_2449 Alide_2449 Alide_2449 2523498 2524499 - sulfate ABC transporter%2C periplasmic sulfate-binding protein KEGG: dia:Dtpsy_1519 sulfate ABC transporter%2C periplasmic sulfate-binding protein~TIGRFAM: sulfate ABC transporter%2C periplasmic sulfate-binding protein~PFAM: extracellular solute-binding protein family 1 gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2449 Alide_2450 Alide_2450 Alide_2450 2524608 2525198 - protein of unknown function DUF1234 PFAM: protein of unknown function DUF1234~KEGG: aav:Aave_2544 hypothetical protein gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2450 Alide_2451 Alide_2451 Alide_2451 2525286 2526203 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dia:Dtpsy_1518 transcriptional regulator%2C LysR family gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2451 Alide_2452 Alide_2452 Alide_2452 2526331 2526981 + NAD(P)H dehydrogenase (quinone) PFAM: NAD(P)H dehydrogenase (quinone)~KEGG: dia:Dtpsy_1517 NAD(P)H dehydrogenase (quinone) gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2452 Alide_2453 Alide_2453 Alide_2453 2527039 2527635 - NADPH-dependent FMN reductase PFAM: NADPH-dependent FMN reductase~KEGG: dia:Dtpsy_1516 NADPH-dependent FMN reductase gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2453 Alide_2454 Alide_2454 Alide_2454 2527682 2528482 - lipoprotein%2C YaeC family KEGG: dia:Dtpsy_1515 lipoprotein%2C YaeC family~TIGRFAM: lipoprotein%2C YaeC family~PFAM: NLPA lipoprotein gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2454 Alide_2455 Alide_2455 Alide_2455 2528588 2529253 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_1513 binding-protein-dependent transport systems inner membrane component gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2455 Alide_2456 Alide_2456 Alide_2456 2529253 2530296 - ABC transporter related protein KEGG: dia:Dtpsy_1512 DL-methionine transporter ATP-binding subunit~PFAM: ABC transporter related%3B NIL domain~SMART: AAA ATPase gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2456 Alide_2457 Alide_2457 Alide_2457 2530405 2530794 - membrane protein-like protein KEGG: ajs:Ajs_2347 membrane protein-like protein gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2457 Alide_2458 Alide_2458 Alide_2458 2530805 2531395 - recombination protein RecR TIGRFAM: recombination protein RecR~PFAM: TOPRIM domain-containing protein%3B Zinc finger C4-type%2C RecR~KEGG: dia:Dtpsy_1509 recombination protein RecR~SMART: Toprim sub domain-containing protein gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2458 Alide_2459 Alide_2459 Alide_2459 2531415 2531747 - Uncharacterized protein family UPF0133 PFAM: Uncharacterised protein family UPF0133~KEGG: ctt:CtCNB1_1631 hypothetical protein gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2459 Alide_2460 Alide_2460 Alide_2460 2531779 2533635 - DNA polymerase III%2C subunits gamma and tau SMART: AAA ATPase~TIGRFAM: DNA polymerase III%2C subunits gamma and tau~KEGG: dia:Dtpsy_1507 DNA polymerase III%2C subunits gamma and tau~PFAM: AAA ATPase central domain protein gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2460 Alide_2461 Alide_2461 Alide_2461 2533818 2534645 - molybdate transport repressor%2C ModE KEGG: cti:RALTA_A0628 transcriptional repressor for molybdate uptake~TIGRFAM: molybdate transport repressor%2C ModE~PFAM: TOBE domain-containing protein%3B regulatory protein LysR gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2461 Alide_2462 Alide_2462 Alide_2462 2534682 2535533 - modD protein TIGRFAM: modD protein~KEGG: cli:Clim_0375 ModD protein~PFAM: Quinolinate phosphoribosyl transferase gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2462 Alide_2463 Alide_2463 Alide_2463 2535530 2536192 - molybdate ABC transporter%2C inner membrane subunit KEGG: dac:Daci_3882 binding-protein-dependent transport systems inner membrane component~TIGRFAM: molybdate ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2463 Alide_2464 Alide_2464 Alide_2464 2536193 2536909 - molybdenum ABC transporter%2C periplasmic molybdate-binding protein KEGG: dac:Daci_3883 molybdenum ABC transporter%2C periplasmic molybdate-binding protein~TIGRFAM: molybdenum ABC transporter%2C periplasmic molybdate-binding protein~PFAM: extracellular solute-binding protein family 1 gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2464 Alide_2465 Alide_2465 Alide_2465 2536921 2539085 - pseudogene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2465 Alide_2466 Alide_2466 Alide_2466 2537595 2538683 - transposase IS4 family protein KEGG: ajs:Ajs_3918 transposase%2C IS4 family protein~manually curated~PFAM: transposase IS4 family protein gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2466 Alide_2467 Alide_2467 Alide_2467 2539079 2539873 - Methyltransferase type 11 PFAM: Methyltransferase type 11~KEGG: bpt:Bpet1277 hypothetical protein gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2467 Alide_2468 Alide_2468 Alide_2468 2539870 2540631 - ABC transporter related protein KEGG: dac:Daci_4650 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2468 Alide_2469 Alide_2469 Alide_2469 2540628 2541626 - transport system permease protein PFAM: transport system permease protein~KEGG: dac:Daci_4649 transport system permease protein gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2469 Alide_2470 Alide_2470 Alide_2470 2541685 2542719 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: dac:Daci_4648 periplasmic binding protein gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2470 Alide_2471 Alide_2471 Alide_2471 2542716 2543255 - Protein of unknown function DUF2478 PFAM: Protein of unknown function DUF2478~KEGG: bpt:Bpet1276 hypothetical protein gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2471 Alide_2472 Alide_2472 Alide_2472 2543335 2545314 - TonB-dependent receptor plug PFAM: TonB-dependent receptor plug%3B TonB-dependent receptor~KEGG: ctt:CtCNB1_0594 TonB-dependent receptor gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2472 Alide_2473 Alide_2473 Alide_2473 2545603 2546193 + hypothetical protein KEGG: dia:Dtpsy_1506 hypothetical protein gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2473 Alide_2474 Alide_2474 Alide_2474 2546175 2547551 - HI0933 family protein PFAM: HI0933 family protein~KEGG: dia:Dtpsy_1505 HI0933 family protein gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2474 Alide_2475 Alide_2475 Alide_2475 2547792 2548676 + Pirin domain protein PFAM: Pirin domain protein~KEGG: bpe:BP2937 hypothetical protein gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2475 Alide_2476 Alide_2476 Alide_2476 2548762 2549643 + Pirin domain protein PFAM: Pirin domain protein~KEGG: pag:PLES_41041 putative pirin protein gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2476 Alide_2477 Alide_2477 Alide_2477 2549650 2552937 - UvrD/REP helicase PFAM: UvrD/REP helicase~KEGG: dia:Dtpsy_1503 UvrD/REP helicase gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2477 Alide_2478 Alide_2478 Alide_2478 2552930 2555497 - exonuclease-like protein KEGG: ajs:Ajs_2356 exonuclease-like protein gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2478 Alide_2479 Alide_2479 Alide_2479 2555600 2555932 + thioredoxin KEGG: vap:Vapar_2323 thioredoxin~TIGRFAM: thioredoxin~PFAM: Thioredoxin domain-containing protein gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2479 Alide_2480 Alide_2480 Alide_2480 2556159 2557421 + transcription termination factor Rho TIGRFAM: transcription termination factor Rho~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B Rho termination factor RNA-binding%3B Rho termination factor domain protein~KEGG: ajs:Ajs_2358 transcription termination factor Rho~SMART: Cold shock protein%3B AAA ATPase gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2480 Alide_2481 Alide_2481 Alide_2481 2557508 2557762 + ribosomal protein L31 KEGG: dia:Dtpsy_1495 ribosomal protein L31~TIGRFAM: ribosomal protein L31~PFAM: ribosomal protein L31 gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2481 Alide_2482 Alide_2482 Alide_2482 2557901 2559595 + putative inner membrane transmembrane protein KEGG: ajs:Ajs_2364 putative inner membrane transmembrane protein gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2482 Alide_2483 Alide_2483 Alide_2483 2559595 2560953 + MATE efflux family protein KEGG: ajs:Ajs_2365 MATE efflux family protein~TIGRFAM: MATE efflux family protein~PFAM: multi antimicrobial extrusion protein MatE gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2483 Alide_2484 Alide_2484 Alide_2484 2560916 2562292 - phosphate regulon sensor kinase PhoR TIGRFAM: phosphate regulon sensor kinase PhoR~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B PAS fold domain protein~KEGG: dia:Dtpsy_1492 PAS/PAC sensor signal transduction histidine kinase~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B PAS domain containing protein gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2484 Alide_2485 Alide_2485 Alide_2485 2562360 2563061 - phosphate regulon transcriptional regulatory protein PhoB TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~KEGG: ajs:Ajs_2367 two component transcriptional regulator~SMART: response regulator receiver gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2485 Alide_2486 Alide_2486 Alide_2486 2563058 2563759 - phosphate transport system regulatory protein PhoU KEGG: ajs:Ajs_2368 phosphate uptake regulator%2C PhoU~TIGRFAM: phosphate transport system regulatory protein PhoU~PFAM: PhoU family protein gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2486 Alide_2487 Alide_2487 Alide_2487 2563756 2564544 - phosphate ABC transporter%2C ATPase subunit TIGRFAM: phosphate ABC transporter%2C ATPase subunit~PFAM: ABC transporter related~KEGG: aav:Aave_2629 phosphate ABC transporter%2C ATPase subunit~SMART: AAA ATPase gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2487 Alide_2488 Alide_2488 Alide_2488 2564575 2565456 - phosphate ABC transporter%2C inner membrane subunit PstA KEGG: ajs:Ajs_2370 phosphate transporter permease subunit PtsA~TIGRFAM: phosphate ABC transporter%2C inner membrane subunit PstA~PFAM: binding-protein-dependent transport systems inner membrane component gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2488 Alide_2489 Alide_2489 Alide_2489 2565453 2566475 - phosphate ABC transporter%2C inner membrane subunit PstC KEGG: dia:Dtpsy_1487 phosphate ABC transporter%2C inner membrane subunit PstC~TIGRFAM: phosphate ABC transporter%2C inner membrane subunit PstC~PFAM: binding-protein-dependent transport systems inner membrane component gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2489 Alide_2490 Alide_2490 Alide_2490 2566539 2567579 - phosphate ABC transporter%2C periplasmic phosphate-binding protein KEGG: dia:Dtpsy_1486 phosphate ABC transporter%2C periplasmic phosphate-binding protein~TIGRFAM: phosphate ABC transporter%2C periplasmic phosphate-binding protein~PFAM: extracellular solute-binding protein family 1 gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2490 Alide_2491 Alide_2491 Alide_2491 2567839 2569320 + Guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase KEGG: dia:Dtpsy_1483 Ppx/GppA phosphatase~PFAM: Ppx/GppA phosphatase gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2491 Alide_2492 Alide_2492 Alide_2492 2569397 2569858 - Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: ajs:Ajs_2377 phosphohistidine phosphatase%2C SixA gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2492 Alide_2493 Alide_2493 Alide_2493 2569858 2572032 - Polyphosphate kinase TIGRFAM: Polyphosphate kinase~KEGG: dia:Dtpsy_1480 polyphosphate kinase~PFAM: Polyphosphate kinase gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2493 Alide_2494 Alide_2494 Alide_2494 2572295 2573113 - ornithine-acyl(acyl carrier protein) N-acyltransferase KEGG: dia:Dtpsy_1479 ornithine-acyl(acyl carrier protein) N-acyltransferase gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2494 Alide_2495 Alide_2495 Alide_2495 2573353 2575146 + diguanylate cyclase TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B PAS fold domain protein~KEGG: ajs:Ajs_2380 diguanylate cyclase/phosphodiesterase~SMART: EAL domain protein%3B GGDEF domain containing protein gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2495 Alide_2496 Alide_2496 Alide_2496 2575238 2576572 - phosphoglucosamine mutase KEGG: dia:Dtpsy_1477 phosphoglucosamine mutase~TIGRFAM: phosphoglucosamine mutase~PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III%3B phosphoglucomutase/phosphomannomutase gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2496 Alide_2497 Alide_2497 Alide_2497 2576562 2577458 - dihydropteroate synthase TIGRFAM: dihydropteroate synthase~KEGG: ajs:Ajs_2382 dihydropteroate synthase~PFAM: dihydropteroate synthase DHPS gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2497 Alide_2498 Alide_2498 Alide_2498 2577527 2579488 - ATP-dependent metalloprotease FtsH SMART: AAA ATPase~TIGRFAM: ATP-dependent metalloprotease FtsH~KEGG: dia:Dtpsy_1475 ATP-dependent metalloprotease FtsH~PFAM: peptidase M41%3B AAA ATPase central domain protein gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2498 Alide_2499 Alide_2499 Alide_2499 2579586 2580248 - ribosomal RNA methyltransferase RrmJ/FtsJ PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ~KEGG: dia:Dtpsy_1474 ribosomal RNA methyltransferase RrmJ/FtsJ gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2499 Alide_2500 Alide_2500 Alide_2500 2580269 2580739 + protein of unknown function UPF0044 PFAM: protein of unknown function UPF0044~KEGG: dia:Dtpsy_1473 protein of unknown function UPF0044 gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2500 Alide_2501 Alide_2501 Alide_2501 2580739 2581482 + hypothetical protein KEGG: dac:Daci_4928 hypothetical protein gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2501 Alide_2502 Alide_2502 Alide_2502 2581483 2581890 - hypothetical protein KEGG: ajs:Ajs_2388 hypothetical protein gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2502 Alide_2503 Alide_2503 Alide_2503 2581893 2582369 - transcription elongation factor GreA KEGG: dia:Dtpsy_1469 transcription elongation factor GreA~TIGRFAM: transcription elongation factor GreA~PFAM: transcription elongation factor GreA/GreB domain-containing protein gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2503 Alide_2504 Alide_2504 Alide_2504 2582496 2585747 - carbamoyl-phosphate synthase%2C large subunit KEGG: dia:Dtpsy_1458 carbamoyl-phosphate synthase%2C large subunit~TIGRFAM: carbamoyl-phosphate synthase%2C large subunit~PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B Carbamoyl-phosphate synthetase large chain oligomerisation%3B MGS domain protein gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2504 Alide_2505 Alide_2505 Alide_2505 2585747 2586925 - carbamoyl-phosphate synthase%2C small subunit KEGG: aav:Aave_2610 carbamoyl-phosphate synthase%2C small subunit~TIGRFAM: carbamoyl-phosphate synthase%2C small subunit~PFAM: Carbamoyl-phosphate synthase small chain%3B glutamine amidotransferase class-I gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2505 Alide_2506 Alide_2506 Alide_2506 2587270 2587695 - regulatory protein MerR KEGG: dia:Dtpsy_1455 transcriptional regulator%2C MerR family~PFAM: regulatory protein MerR~SMART: regulatory protein MerR gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2506 Alide_2507 Alide_2507 Alide_2507 2587795 2588148 - integration host factor%2C alpha subunit TIGRFAM: integration host factor%2C alpha subunit~PFAM: histone family protein DNA-binding protein~KEGG: dia:Dtpsy_1454 integration host factor subunit alpha~SMART: histone family protein DNA-binding protein gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2507 Alide_2508 Alide_2508 Alide_2508 2588145 2590589 - phenylalanyl-tRNA synthetase%2C beta subunit KEGG: ajs:Ajs_2395 phenylalanyl-tRNA synthetase subunit beta~TIGRFAM: phenylalanyl-tRNA synthetase%2C beta subunit gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2508 Alide_2509 Alide_2509 Alide_2509 2590713 2591765 - phenylalanyl-tRNA synthetase%2C alpha subunit KEGG: dia:Dtpsy_1452 phenylalanyl-tRNA synthetase subunit alpha~TIGRFAM: phenylalanyl-tRNA synthetase%2C alpha subunit~PFAM: phenylalanyl-tRNA synthetase class IIc%3B aminoacyl tRNA synthetase class II domain protein gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2509 Alide_2510 Alide_2510 Alide_2510 2591867 2592226 - ribosomal protein L20 KEGG: ajs:Ajs_2397 50S ribosomal protein L20~TIGRFAM: ribosomal protein L20~PFAM: ribosomal protein L20 gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2510 Alide_2511 Alide_2511 Alide_2511 2592253 2592456 - ribosomal protein L35 KEGG: aav:Aave_2857 50S ribosomal protein L35~TIGRFAM: ribosomal protein L35~PFAM: Ribosomal protein L35 gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2511 Alide_2512 Alide_2512 Alide_2512 2592632 2593156 - translation initiation factor IF-3 KEGG: dia:Dtpsy_1449 translation initiation factor IF-3~TIGRFAM: translation initiation factor IF-3~PFAM: Translation initiation factor 3-like gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2512 Alide_2513 Alide_2513 Alide_2513 2593310 2595229 - threonyl-tRNA synthetase KEGG: ajs:Ajs_2400 threonyl-tRNA synthetase~TIGRFAM: threonyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Threonyl/alanyl tRNA synthetase SAD%3B TGS domain-containing protein%3B Anticodon-binding domain protein gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2513 Alide_2514 Alide_2514 Alide_2514 2595588 2596499 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: bbr:BB4124 putative enzyme-regulator fusion protein gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2514 Alide_2515 Alide_2515 Alide_2515 2596574 2596699 + pseudogene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2515 Alide_2516 Alide_2516 Alide_2516 2596920 2598251 - isocitrate lyase KEGG: dia:Dtpsy_1447 isocitrate lyase~TIGRFAM: isocitrate lyase~PFAM: isocitrate lyase and phosphorylmutase gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2516 Alide_2517 Alide_2517 Alide_2517 2598517 2599536 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: ajs:Ajs_2402 hypothetical protein gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2517 Alide_2518 Alide_2518 Alide_2518 2599693 2599974 + SWIB/MDM2 domain-containing protein KEGG: dia:Dtpsy_1444 SWIB/MDM2 domain protein~PFAM: SWIB/MDM2 domain-containing protein~SMART: SWIB domain gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2518 Alide_2519 Alide_2519 Alide_2519 2600169 2600441 + BFD domain protein (2Fe-2S)-binding domain protein KEGG: dia:Dtpsy_1443 BFD domain protein (2Fe-2S)-binding domain protein~manually curated~PFAM: BFD domain protein [2Fe-2S]-binding domain protein gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2519 Alide_2520 Alide_2520 Alide_2520 2600597 2601253 + TonB family protein KEGG: dia:Dtpsy_1442 TonB family protein~TIGRFAM: TonB family protein~PFAM: TonB domain gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2520 Alide_2521 Alide_2521 Alide_2521 2601269 2601988 + MotA/TolQ/ExbB proton channel PFAM: MotA/TolQ/ExbB proton channel~KEGG: dia:Dtpsy_1441 MotA/TolQ/ExbB proton channel gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2521 Alide_2522 Alide_2522 Alide_2522 2601995 2602405 + Biopolymer transport protein ExbD/TolR PFAM: Biopolymer transport protein ExbD/TolR~KEGG: ajs:Ajs_2408 biopolymer transport protein ExbD/TolR gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2522 Alide_2523 Alide_2523 Alide_2523 2602501 2602728 + Hemin uptake protein hemP PFAM: Hemin uptake protein hemP~KEGG: ajs:Ajs_2409 hypothetical protein gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2523 Alide_2524 Alide_2524 Alide_2524 2602956 2603363 - protein of unknown function DUF336 PFAM: protein of unknown function DUF336~KEGG: dia:Dtpsy_1438 protein of unknown function DUF336 gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2524 Alide_2525 Alide_2525 Alide_2525 2603582 2604271 + protein of unknown function UPF0005 PFAM: protein of unknown function UPF0005~KEGG: dia:Dtpsy_1437 protein of unknown function UPF0005 gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2525 Alide_2526 Alide_2526 Alide_2526 2604390 2604893 + regulatory protein MarR KEGG: rme:Rmet_3623 MarR family transcriptional regulator~PFAM: regulatory protein MarR~SMART: regulatory protein MarR gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2526 Alide_2527 Alide_2527 Alide_2527 2604890 2606323 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: reu:Reut_B5563 major facilitator transporter gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2527 Alide_2528 Alide_2528 Alide_2528 2606377 2606760 + hypothetical protein KEGG: ajs:Ajs_2412 hypothetical protein gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2528 Alide_2529 Alide_2529 Alide_2529 2606793 2607125 - small multidrug resistance protein PFAM: small multidrug resistance protein~KEGG: dia:Dtpsy_1617 small multidrug resistance protein gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2529 Alide_2530 Alide_2530 Alide_2530 2607340 2607930 + Chromate transporter PFAM: Chromate transporter~KEGG: dia:Dtpsy_1615 chromate transporter gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2530 Alide_2531 Alide_2531 Alide_2531 2607933 2608526 + Chromate transporter PFAM: Chromate transporter~KEGG: dia:Dtpsy_1614 chromate transporter gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2531 Alide_2532 Alide_2532 Alide_2532 2608548 2609375 - Silent information regulator protein Sir2 PFAM: Silent information regulator protein Sir2~KEGG: dia:Dtpsy_1612 silent information regulator protein Sir2 gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2532 Alide_2533 Alide_2533 Alide_2533 2609397 2610062 - regulatory protein TetR PFAM: regulatory protein TetR~KEGG: dia:Dtpsy_1611 regulatory protein TetR gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2533 Alide_2534 Alide_2534 Alide_2534 2610146 2610499 + protein of unknown function DUF1428 PFAM: protein of unknown function DUF1428~KEGG: dia:Dtpsy_1610 protein of unknown function DUF1428 gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2534 Alide_2535 Alide_2535 Alide_2535 2610544 2610891 + glutathione-dependent formaldehyde-activating GFA PFAM: glutathione-dependent formaldehyde-activating GFA~KEGG: pol:Bpro_2417 glutathione-dependent formaldehyde-activating%2C GFA gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2535 Alide_2536 Alide_2536 Alide_2536 2610985 2611437 + 3-demethylubiquinone-9 3-methyltransferase KEGG: ajs:Ajs_2265 3-demethylubiquinone-9 3-methyltransferase gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2536 Alide_2537 Alide_2537 Alide_2537 2611470 2611916 + Activator of Hsp90 ATPase 1 family protein PFAM: Activator of Hsp90 ATPase 1 family protein~KEGG: dia:Dtpsy_1608 activator of HSP90 ATPase 1 family protein gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2537 Alide_2538 Alide_2538 Alide_2538 2611952 2612437 + 3-demethylubiquinone-9 3-methyltransferase KEGG: gur:Gura_0848 3-demethylubiquinone-9 3-methyltransferase gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2538 Alide_2539 Alide_2539 Alide_2539 2612561 2612944 + hypothetical protein KEGG: dac:Daci_4029 hypothetical protein gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2539 Alide_2540 Alide_2540 Alide_2540 2612951 2613409 + Activator of Hsp90 ATPase 1 family protein PFAM: Activator of Hsp90 ATPase 1 family protein~KEGG: dar:Daro_2725 hypothetical protein gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2540 Alide_2541 Alide_2541 Alide_2541 2613416 2614162 - RNA methyltransferase%2C TrmH family%2C group 3 KEGG: dia:Dtpsy_1606 RNA methyltransferase%2C TrmH family%2C group 3~TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 3~PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2541 Alide_2542 Alide_2542 Alide_2542 2614305 2615516 + sodium:dicarboxylate symporter PFAM: sodium:dicarboxylate symporter~KEGG: dia:Dtpsy_1605 serine/threonine transporter SstT gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2542 Alide_2543 Alide_2543 Alide_2543 2615550 2616272 - ABC transporter related protein KEGG: dia:Dtpsy_1604 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2543 Alide_2544 Alide_2544 Alide_2544 2616291 2616944 + Arylesterase KEGG: dia:Dtpsy_1603 lipolytic protein G-D-S-L family~PFAM: lipolytic protein G-D-S-L family gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2544 Alide_2545 Alide_2545 Alide_2545 2616958 2617788 - Protein of unknown function DUF2189%2C transmembrane PFAM: Protein of unknown function DUF2189%2C transmembrane~KEGG: dia:Dtpsy_1602 integral membrane protein gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2545 Alide_2546 Alide_2546 Alide_2546 2617901 2619130 - Cys/Met metabolism pyridoxal-phosphate-dependent protein PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein~KEGG: dia:Dtpsy_1601 Cys/Met metabolism pyridoxal-phosphate-dependent protein gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2546 Alide_2547 Alide_2547 Alide_2547 2619151 2619606 - transport-associated protein KEGG: dia:Dtpsy_1600 transport-associated~PFAM: transport-associated~SMART: Transport-associated and nodulation region gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2547 Alide_2548 Alide_2548 Alide_2548 2619733 2621418 + sulphate transporter PFAM: sulphate transporter%3B Sulfate transporter/antisigma-factor antagonist STAS~KEGG: ajs:Ajs_2275 sulphate transporter gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2548 Alide_2549 Alide_2549 Alide_2549 2621455 2622228 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~KEGG: dia:Dtpsy_1598 diguanylate cyclase~SMART: GGDEF domain containing protein gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2549 Alide_2550 Alide_2550 Alide_2550 2622239 2623108 + cobyrinic acid ac-diamide synthase KEGG: dia:Dtpsy_1597 cobyrinic acid ac-diamide synthase gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2550 Alide_2551 Alide_2551 Alide_2551 2623179 2625083 - propionate/CoA ligase KEGG: dia:Dtpsy_1825 propionyl-CoA synthetase~TIGRFAM: propionate/CoA ligase~PFAM: AMP-dependent synthetase and ligase gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2551 Alide_2552 Alide_2552 Alide_2552 2625205 2625813 - isochorismatase hydrolase PFAM: isochorismatase hydrolase~KEGG: dia:Dtpsy_1824 isochorismatase hydrolase gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2552 Alide_2553 Alide_2553 Alide_2553 2625877 2626980 - NHL repeat containing protein PFAM: NHL repeat containing protein~KEGG: dia:Dtpsy_1823 glucose sorbosone dehydrogenase gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2553 Alide_2554 Alide_2554 Alide_2554 2627126 2628040 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dia:Dtpsy_1814 transcriptional regulator%2C LysR family gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2554 Alide_2555 Alide_2555 Alide_2555 2628171 2629688 + methylmalonate-semialdehyde dehydrogenase KEGG: ajs:Ajs_2009 methylmalonate-semialdehyde dehydrogenase [acylating]~TIGRFAM: methylmalonate-semialdehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2555 Alide_2556 Alide_2556 Alide_2556 2629685 2630083 + hypothetical protein KEGG: ajs:Ajs_2008 hypothetical protein gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2556 Alide_2557 Alide_2557 Alide_2557 2630109 2631275 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: ajs:Ajs_2007 acyl-CoA dehydrogenase domain-containing protein gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2557 Alide_2558 Alide_2558 Alide_2558 2631343 2631729 + hypothetical protein KEGG: dia:Dtpsy_1810 hypothetical protein gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2558 Alide_2559 Alide_2559 Alide_2559 2631760 2632656 + 3-hydroxyisobutyrate dehydrogenase TIGRFAM: 3-hydroxyisobutyrate dehydrogenase~KEGG: dia:Dtpsy_1809 3-hydroxyisobutyrate dehydrogenase~PFAM: 6-phosphogluconate dehydrogenase NAD-binding gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2559 Alide_2560 Alide_2560 Alide_2560 2632819 2633652 + methyltransferase FkbM family TIGRFAM: methyltransferase FkbM family~KEGG: ter:Tery_1754 FkbM family methyltransferase gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2560 Alide_2561 Alide_2561 Alide_2561 2634150 2634539 - hypothetical protein KEGG: dia:Dtpsy_1801 hypothetical protein gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2561 Alide_2562 Alide_2562 Alide_2562 2634677 2635885 + tryptophan synthase%2C beta subunit KEGG: dia:Dtpsy_1800 tryptophan synthase subunit beta~TIGRFAM: tryptophan synthase%2C beta subunit~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2562 Alide_2563 Alide_2563 Alide_2563 2635913 2636251 + protein of unknown function DUF469 PFAM: protein of unknown function DUF469~KEGG: dia:Dtpsy_1799 protein of unknown function DUF469 gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2563 Alide_2564 Alide_2564 Alide_2564 2636328 2637908 - galactarate dehydratase TIGRFAM: galactarate dehydratase~KEGG: ajs:Ajs_1998 galactarate dehydratase~PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein%3B SAF domain protein gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2564 Alide_2565 Alide_2565 Alide_2565 2637949 2638947 - hypothetical protein KEGG: ajs:Ajs_1997 hypothetical protein gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2565 Alide_2566 Alide_2566 Alide_2566 2638972 2640267 - Mandelate racemase/muconate lactonizing protein PFAM: Mandelate racemase/muconate lactonizing protein~KEGG: ctt:CtCNB1_0239 mandelate racemase/muconate lactonizing gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2566 Alide_2567 Alide_2567 Alide_2567 2640273 2641103 + GntR domain protein KEGG: ctt:CtCNB1_0240 GntR-like protein~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2567 Alide_2568 Alide_2568 Alide_2568 2641297 2642283 + hypothetical protein KEGG: dia:Dtpsy_1794 hypothetical protein gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2568 Alide_2569 Alide_2569 Alide_2569 2642355 2643266 + 5-dehydro-4-deoxyglucarate dehydratase TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase~KEGG: dia:Dtpsy_1793 5-dehydro-4-deoxyglucarate dehydratase~PFAM: dihydrodipicolinate synthetase gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2569 Alide_2570 Alide_2570 Alide_2570 2643318 2644271 + hypothetical protein KEGG: ajs:Ajs_1992 hypothetical protein gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2570 Alide_2571 Alide_2571 Alide_2571 2644283 2645275 + D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region~KEGG: ajs:Ajs_1991 D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD-binding gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2571 Alide_2572 Alide_2572 Alide_2572 2645306 2646643 + Glucarate dehydratase KEGG: dia:Dtpsy_1790 glucarate dehydratase~PFAM: Mandelate racemase/muconate lactonizing protein gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2572 Alide_2573 Alide_2573 Alide_2573 2646716 2648164 + Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: ctt:CtCNB1_0246 aldehyde dehydrogenase gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2573 Alide_2574 Alide_2574 Alide_2574 2648234 2648986 + leucyl/phenylalanyl-tRNA/protein transferase TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase~KEGG: dia:Dtpsy_1788 leucyl/phenylalanyl-tRNA--protein transferase~PFAM: leucyl/phenylalanyl-tRNA--protein transferase gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2574 Alide_2575 Alide_2575 Alide_2575 2648983 2649726 + Arginine-tRNA-protein transferase domain protein PFAM: Arginine-tRNA-protein transferase domain protein~KEGG: dia:Dtpsy_1787 arginyl-tRNA-protein transferase gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2575 Alide_2576 Alide_2576 Alide_2576 2649799 2650500 - Pirin domain protein PFAM: Pirin domain protein~KEGG: ajs:Ajs_1985 pirin domain-containing protein gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2576 Alide_2577 Alide_2577 Alide_2577 2650612 2651547 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dia:Dtpsy_1784 transcriptional regulator%2C LysR family gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2577 Alide_2578 Alide_2578 Alide_2578 2651622 2652716 + amine oxidase PFAM: amine oxidase~KEGG: ajs:Ajs_1983 FAD dependent oxidoreductase gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2578 Alide_2579 Alide_2579 Alide_2579 2652713 2653678 + Glutamate--tRNA ligase KEGG: ajs:Ajs_1982 glutamate--tRNA ligase~PFAM: Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C catalytic domain gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2579 Alide_2580 Alide_2580 Alide_2580 2653636 2654409 + tRNA (guanine-N(7)-)-methyltransferase KEGG: dia:Dtpsy_1781 tRNA (guanine-N(7)-)-methyltransferase~TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase~PFAM: methyltransferase gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2580 Alide_2581 Alide_2581 Alide_2581 2654438 2655442 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~KEGG: dia:Dtpsy_1780 diguanylate cyclase~SMART: GGDEF domain containing protein gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2581 Alide_2582 Alide_2582 Alide_2582 2655493 2658114 - alanyl-tRNA synthetase KEGG: dia:Dtpsy_1779 alanyl-tRNA synthetase~TIGRFAM: alanyl-tRNA synthetase~PFAM: Alanyl-tRNA synthetase%2C class IIc-like%3B Threonyl/alanyl tRNA synthetase SAD%3B phosphoesterase DHHA1 gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2582 Alide_2583 Alide_2583 Alide_2583 2658334 2659248 + dihydrodipicolinate synthetase PFAM: dihydrodipicolinate synthetase~KEGG: vap:Vapar_5222 dihydrodipicolinate synthetase gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2583 Alide_2584 Alide_2584 Alide_2584 2659269 2659904 + Tripartite ATP-independent periplasmic transporter DctQ component PFAM: Tripartite ATP-independent periplasmic transporter DctQ component~KEGG: ctt:CtCNB1_4596 tripartite ATP-independent periplasmic gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2584 Alide_2585 Alide_2585 Alide_2585 2659922 2661187 + TRAP dicarboxylate transporter%2C DctM subunit KEGG: ctt:CtCNB1_4595 TRAP dicarboxylate transporter%2C DctM subunit~TIGRFAM: TRAP dicarboxylate transporter%2C DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2585 Alide_2586 Alide_2586 Alide_2586 2661213 2662199 + Extracellular solute-binding protein%2C family 7 PFAM: Extracellular solute-binding protein%2C family 7~KEGG: ctt:CtCNB1_4594 TRAP dicarboxylate transporter%2C DctP subunit gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2586 Alide_2587 Alide_2587 Alide_2587 2662257 2663291 + Malate/L-lactate dehydrogenase PFAM: Malate/L-lactate dehydrogenase~KEGG: bpd:BURPS668_A0565 malate/L-lactate dehydrogenase family protein gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2587 Alide_2588 Alide_2588 Alide_2588 2663366 2664040 + GntR domain protein KEGG: vap:Vapar_5216 transcriptional regulator%2C GntR family~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2588 Alide_2589 Alide_2589 Alide_2589 2664064 2665014 + pseudouridine synthase PFAM: pseudouridine synthase~KEGG: dia:Dtpsy_1777 pseudouridine synthase gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2589 Alide_2590 Alide_2590 Alide_2590 2664989 2667694 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: dia:Dtpsy_1832 GCN5-related N-acetyltransferase gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2590 Alide_2591 Alide_2591 Alide_2591 2667741 2669084 - Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein~KEGG: dia:Dtpsy_1831 3-deoxy-D-manno-octulosonic-acid transferase domain protein gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2591 Alide_2592 Alide_2592 Alide_2592 2669105 2670493 - Phosphoglucomutase KEGG: dia:Dtpsy_1830 phosphomannomutase~PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III%3B phosphoglucomutase/phosphomannomutase gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2592 Alide_2593 Alide_2593 Alide_2593 2670562 2671533 - hypothetical protein KEGG: dac:Daci_0982 hypothetical protein gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2593 Alide_2594 Alide_2594 Alide_2594 2671546 2672520 - hypothetical protein KEGG: vei:Veis_0062 hypothetical protein gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2594 Alide_2595 Alide_2595 Alide_2595 2672615 2673421 - myo-inositol catabolism protein%2C protein IolB KEGG: rsc:RCFBP_20182 myo-inositol catabolism protein%2C protein IolB gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2595 Alide_2596 Alide_2596 Alide_2596 2673418 2675373 - Protein of unknown function DUF2090 PFAM: Protein of unknown function DUF2090%3B PfkB domain protein~KEGG: dac:Daci_0985 ribokinase-like domain-containing protein gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2596 Alide_2597 Alide_2597 Alide_2597 2675468 2676340 + sugar isomerase (SIS) PFAM: sugar isomerase (SIS)%3B helix-turn-helix protein RpiR~KEGG: dac:Daci_0986 RpiR family transcriptional regulator gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2597 Alide_2598 Alide_2598 Alide_2598 2676402 2677901 + AlkA domain protein KEGG: ajs:Ajs_2020 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II / transcriptional regulator Ada~PFAM: AlkA domain protein%3B Ada metal-binding domain-containing protein%3B helix-turn-helix- domain containing protein AraC type%3B HhH-GPD family protein~SMART: Helix-turn-helix%2C AraC domain%3B HhH-GPD family protein gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2598 Alide_2599 Alide_2599 Alide_2599 2677960 2678487 + methylated-DNA/protein-cysteine methyltransferase KEGG: dia:Dtpsy_1828 methylated-DNA/protein-cysteine methyltransferase~TIGRFAM: methylated-DNA/protein-cysteine methyltransferase~PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2599 Alide_2600 Alide_2600 Alide_2600 2678484 2679407 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: dia:Dtpsy_1827 protein of unknown function DUF6 transmembrane gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2600 Alide_2601 Alide_2601 Alide_2601 2679427 2680389 - Forkhead-associated protein KEGG: aav:Aave_3080 putative adenylate/guanylate cyclase~PFAM: Forkhead-associated protein%3B adenylyl cyclase class-3/4/guanylyl cyclase~SMART: Forkhead-associated protein gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2601 Alide_2602 Alide_2602 Alide_2602 2680595 2681566 - Muramoyltetrapeptide carboxypeptidase KEGG: dia:Dtpsy_1593 muramoyltetrapeptide carboxypeptidase~PFAM: peptidase U61 LD-carboxypeptidase A gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2602 Alide_2603 Alide_2603 Alide_2603 2681550 2682626 - CMP/dCMP deaminase zinc-binding protein PFAM: CMP/dCMP deaminase zinc-binding%3B alpha/beta hydrolase fold~KEGG: ajs:Ajs_2282 CMP/dCMP deaminase%2C zinc-binding gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2603 Alide_2604 Alide_2604 Alide_2604 2682674 2683306 - Negative transcriptional regulator PFAM: Negative transcriptional regulator~KEGG: vap:Vapar_2794 FMN-binding negative transcriptional regulator gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2604 Alide_2605 Alide_2605 Alide_2605 2683359 2685332 + peptidase U32 PFAM: peptidase U32~KEGG: dia:Dtpsy_1589 peptidase U32 gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2605 Alide_2606 Alide_2606 Alide_2606 2685418 2686695 + O-acetylhomoserine/O-acetylserine sulfhydrylase TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase~KEGG: dia:Dtpsy_1588 O-acetylhomoserine/O-acetylserine sulfhydrylase~PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2606 Alide_2607 Alide_2607 Alide_2607 2686745 2688040 - protein of unknown function DUF323 PFAM: protein of unknown function DUF323~KEGG: dia:Dtpsy_1587 protein of unknown function DUF323 gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2607 Alide_2608 Alide_2608 Alide_2608 2688054 2689028 - methyltransferase KEGG: dia:Dtpsy_1586 methyltransferase~TIGRFAM: methyltransferase~PFAM: Protein of unknown function DUF2260 gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2608 Alide_2609 Alide_2609 Alide_2609 2689278 2689868 - OmpW family protein KEGG: dia:Dtpsy_1585 OmpW family protein~manually curated~PFAM: OmpW family protein gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2609 Alide_2610 Alide_2610 Alide_2610 2690013 2691005 - protein of unknown function DUF808 PFAM: protein of unknown function DUF808~KEGG: ajs:Ajs_2290 hypothetical protein gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2610 Alide_2611 Alide_2611 Alide_2611 2691109 2695128 - phosphoribosylformylglycinamidine synthase TIGRFAM: phosphoribosylformylglycinamidine synthase~KEGG: dia:Dtpsy_1582 phosphoribosylformylglycinamidine synthase~PFAM: AIR synthase related protein domain protein%3B AIR synthase related protein gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2611 Alide_2612 Alide_2612 Alide_2612 2695309 2696127 + methionine aminopeptidase%2C type I KEGG: dia:Dtpsy_1581 methionine aminopeptidase%2C type I~TIGRFAM: methionine aminopeptidase%2C type I~PFAM: peptidase M24 gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2612 Alide_2613 Alide_2613 Alide_2613 2696175 2698799 + protein-P-II uridylyltransferase SMART: metal-dependent phosphohydrolase HD region~TIGRFAM: protein-P-II uridylyltransferase~KEGG: dia:Dtpsy_1580 PII uridylyl-transferase~PFAM: GlnD PII-uridylyltransferase%3B protein of unknown function DUF294 nucleotidyltransferase%3B metal-dependent phosphohydrolase HD sub domain%3B amino acid-binding ACT domain protein gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2613 Alide_2614 Alide_2614 Alide_2614 2698809 2700287 - xanthine permease KEGG: ctt:CtCNB1_3177 uracil-xanthine permease~TIGRFAM: xanthine permease%3B uracil-xanthine permease~PFAM: Xanthine/uracil/vitamin C permease gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2614 Alide_2615 Alide_2615 Alide_2615 2700519 2701058 - peptide deformylase TIGRFAM: peptide deformylase~KEGG: dac:Daci_4855 peptide deformylase~PFAM: formylmethionine deformylase gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2615 Alide_2616 Alide_2616 Alide_2616 2701152 2701571 + protein of unknown function DUF454 PFAM: protein of unknown function DUF454~KEGG: ajs:Ajs_2296 hypothetical protein gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2616 Alide_2617 Alide_2617 Alide_2617 2702023 2702289 - pseudogene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2617 Alide_2618 Alide_2618 Alide_2618 2702405 2702731 + hypothetical protein KEGG: pzu:PHZ_c2127 hypothetical protein gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2618 Alide_2619 Alide_2619 Alide_2619 2702733 2703335 + hypothetical protein KEGG: pzu:PHZ_c2128 hypothetical protein gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2619 Alide_2620 Alide_2620 Alide_2620 2703620 2704879 - isocitrate dehydrogenase%2C NADP-dependent KEGG: aav:Aave_2572 isocitrate dehydrogenase~TIGRFAM: isocitrate dehydrogenase%2C NADP-dependent~PFAM: isocitrate/isopropylmalate dehydrogenase gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2620 Alide_2621 Alide_2621 Alide_2621 2705402 2705875 + protein of unknown function DUF192 PFAM: protein of unknown function DUF192~KEGG: dia:Dtpsy_1560 protein of unknown function DUF192 gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2621 Alide_2622 Alide_2622 Alide_2622 2705945 2708182 - isocitrate dehydrogenase%2C NADP-dependent TIGRFAM: isocitrate dehydrogenase%2C NADP-dependent~KEGG: ajs:Ajs_2300 isocitrate dehydrogenase%2C NADP-dependent~PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2622 Alide_2623 Alide_2623 Alide_2623 2708482 2709063 - Superoxide dismutase KEGG: ajs:Ajs_2301 superoxide dismutase~PFAM: Manganese/iron superoxide dismutase-like gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2623 Alide_2624 Alide_2624 Alide_2624 2709206 2710543 - exodeoxyribonuclease VII%2C large subunit TIGRFAM: exodeoxyribonuclease VII%2C large subunit~KEGG: ajs:Ajs_2302 exodeoxyribonuclease VII large subunit~PFAM: Exonuclease VII%2C large subunit-like%3B nucleic acid binding OB-fold tRNA/helicase-type gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2624 Alide_2625 Alide_2625 Alide_2625 2710906 2711544 + MotA/TolQ/ExbB proton channel PFAM: MotA/TolQ/ExbB proton channel~KEGG: dia:Dtpsy_1556 MotA/TolQ/ExbB proton channel gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2625 Alide_2626 Alide_2626 Alide_2626 2711552 2711977 + Biopolymer transport protein ExbD/TolR PFAM: Biopolymer transport protein ExbD/TolR~KEGG: dia:Dtpsy_1555 biopolymer transport protein ExbD/TolR gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2626 Alide_2627 Alide_2627 Alide_2627 2711982 2712980 + tetraacyldisaccharide 4'-kinase TIGRFAM: tetraacyldisaccharide 4'-kinase~KEGG: ajs:Ajs_2305 tetraacyldisaccharide 4'-kinase~PFAM: Tetraacyldisaccharide-1-P 4'-kinase gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2627 Alide_2628 Alide_2628 Alide_2628 2712994 2713176 + protein of unknown function DUF343 PFAM: protein of unknown function DUF343~KEGG: dia:Dtpsy_1553 protein of unknown function DUF343 gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2628 Alide_2629 Alide_2629 Alide_2629 2713173 2713958 + 3-deoxy-D-manno-octulosonate cytidylyltransferase TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase~KEGG: ajs:Ajs_2307 3-deoxy-D-manno-octulosonate cytidylyltransferase~PFAM: acylneuraminate cytidylyltransferase gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2629 Alide_2630 Alide_2630 Alide_2630 2714057 2714713 + adenylate kinase KEGG: dia:Dtpsy_1551 adenylate kinase~TIGRFAM: adenylate kinase~PFAM: adenylate kinase%3B adenylate kinase lid domain-containing protein gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2630 Alide_2631 Alide_2631 Alide_2631 2714786 2715748 - Asparaginase KEGG: dia:Dtpsy_1550 asparaginase~PFAM: Asparaginase/glutaminase gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2631 Alide_2632 Alide_2632 Alide_2632 2715828 2716502 + LexA repressor KEGG: dia:Dtpsy_1549 LexA repressor~TIGRFAM: LexA repressor~PFAM: LexA DNA-binding domain protein%3B Peptidase S24/S26A/S26B%2C conserved region gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2632 Alide_2633 Alide_2633 Alide_2633 2716657 2717001 + hypothetical protein KEGG: ajs:Ajs_2311 hypothetical protein gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2633 Alide_2634 Alide_2634 Alide_2634 2717009 2720989 - ATP-dependent helicase HrpA TIGRFAM: ATP-dependent helicase HrpA~PFAM: helicase-associated domain protein%3B helicase domain protein%3B protein of unknown function DUF1605~KEGG: dia:Dtpsy_1546 ATP-dependent helicase HrpA~SMART: DEAD-like helicase %3B AAA ATPase%3B helicase domain protein gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2634 Alide_2635 Alide_2635 Alide_2635 2721045 2722238 - acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~KEGG: ajs:Ajs_2317 acetyl-CoA acetyltransferases~PFAM: Thiolase-like gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2635 Alide_2636 Alide_2636 Alide_2636 2722235 2723704 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: dia:Dtpsy_1541 AMP-dependent synthetase and ligase gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2636 Alide_2637 Alide_2637 Alide_2637 2723707 2724291 - BioY protein PFAM: BioY protein~KEGG: dia:Dtpsy_1540 BioY protein gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2637 Alide_2638 Alide_2638 Alide_2638 2724329 2724922 - cobalt transport protein PFAM: cobalt transport protein~KEGG: ajs:Ajs_2320 cobalt transport protein gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2638 Alide_2639 Alide_2639 Alide_2639 2724941 2725714 - ABC transporter related protein KEGG: dia:Dtpsy_1538 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2639 Alide_2640 Alide_2640 Alide_2640 2726145 2726723 + hypothetical protein KEGG: bte:BTH_II1296 hypothetical protein gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2640 Alide_2641 Alide_2641 Alide_2641 2726770 2727204 + hypothetical protein KEGG: gdj:Gdia_1658 hypothetical protein gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2641 Alide_2642 Alide_2642 Alide_2642 2727258 2727674 + lactoylglutathione lyase TIGRFAM: lactoylglutathione lyase~KEGG: dia:Dtpsy_1870 lactoylglutathione lyase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2642 Alide_2643 Alide_2643 Alide_2643 2727738 2729261 - GTP-binding protein HSR1-related protein PFAM: GTP-binding protein HSR1-related~KEGG: bpt:Bpet1383 hypothetical protein gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2643 Alide_2644 Alide_2644 Alide_2644 2729258 2730520 - hypothetical protein KEGG: bpt:Bpet1384 hypothetical protein gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2644 Alide_2645 Alide_2645 Alide_2645 2730523 2731869 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: bpt:Bpet1386 putative N-hydroxybenzoate transporter gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2645 Alide_2646 Alide_2646 Alide_2646 2731901 2732881 - hypothetical protein KEGG: dia:Dtpsy_0161 hypothetical protein gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2646 Alide_2647 Alide_2647 Alide_2647 2732929 2733207 - muconolactone delta-isomerase TIGRFAM: muconolactone delta-isomerase~KEGG: bpt:Bpet1390 methylmuconolactone isomerase~PFAM: Muconolactone delta-isomerase gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2647 Alide_2648 Alide_2648 Alide_2648 2733228 2734031 - 3-oxoadipate enol-lactonase KEGG: bpt:Bpet1391 3-oxoadipate enol-lactone hydrolase~TIGRFAM: 3-oxoadipate enol-lactonase~PFAM: alpha/beta hydrolase fold gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2648 Alide_2649 Alide_2649 Alide_2649 2734043 2734816 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bpt:Bpet1396 1%2C6-dihydroxycyclohexa-2%2C4-diene-1-carboxylate dehydrogenase gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2649 Alide_2650 Alide_2650 Alide_2650 2734839 2735774 - catechol 1%2C2-dioxygenase KEGG: bpt:Bpet1400 catechol 1%2C2-dioxygenase~TIGRFAM: catechol 1%2C2-dioxygenase~PFAM: intradiol ring-cleavage dioxygenase%3B Catechol dioxygenase domain protein gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2650 Alide_2651 Alide_2651 Alide_2651 2735818 2736993 - muconate and chloromuconate cycloisomerase KEGG: bpt:Bpet1401 chloromuconate cycloisomerase~TIGRFAM: muconate and chloromuconate cycloisomerase~PFAM: Mandelate racemase/muconate lactonizing protein gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2651 Alide_2652 Alide_2652 Alide_2652 2737108 2738058 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: bpt:Bpet1402 transcriptional regulator CatR gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2652 Alide_2653 Alide_2653 Alide_2653 2738123 2738761 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase~KEGG: ajs:Ajs_2048 2-keto-3-deoxy-phosphogluconate aldolase~PFAM: KDPG and KHG aldolase gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2653 Alide_2654 Alide_2654 Alide_2654 2738752 2740569 - 6-phosphogluconate dehydratase TIGRFAM: 6-phosphogluconate dehydratase~KEGG: ajs:Ajs_2049 phosphogluconate dehydratase~PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2654 Alide_2655 Alide_2655 Alide_2655 2740696 2741706 - TRAP dicarboxylate transporter%2C DctP subunit KEGG: dia:Dtpsy_1873 TRAP dicarboxylate transporter%2C DctP subunit~TIGRFAM: TRAP dicarboxylate transporter%2C DctP subunit~PFAM: Extracellular solute-binding protein%2C family 7 gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2655 Alide_2656 Alide_2656 Alide_2656 2741763 2743043 - TRAP dicarboxylate transporter%2C DctM subunit KEGG: dia:Dtpsy_1874 TRAP dicarboxylate transporter%2C DctM subunit~TIGRFAM: TRAP dicarboxylate transporter%2C DctM subunit~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2656 Alide_2657 Alide_2657 Alide_2657 2743054 2743575 - Tripartite ATP-independent periplasmic transporter DctQ component PFAM: Tripartite ATP-independent periplasmic transporter DctQ component~KEGG: dia:Dtpsy_1875 tripartite ATP-independent periplasmic transporter DctQ component gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2657 Alide_2658 Alide_2658 Alide_2658 2743572 2744126 - carbohydrate kinase%2C thermoresistant glucokinase family PFAM: shikimate kinase~manually curated~KEGG: ajs:Ajs_2053 carbohydrate kinase~TIGRFAM: carbohydrate kinase%2C thermoresistant glucokinase family gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2658 Alide_2659 Alide_2659 Alide_2659 2744331 2745356 + periplasmic binding protein/LacI transcriptional regulator KEGG: ajs:Ajs_2054 LacI family transcription regulator~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2659 Alide_2660 Alide_2660 Alide_2660 2745402 2747750 - ATP-dependent Clp protease%2C ATP-binding subunit clpA TIGRFAM: ATP-dependent Clp protease%2C ATP-binding subunit clpA~PFAM: ATPase AAA-2 domain protein%3B Clp domain protein%3B AAA ATPase central domain protein%3B Clp ATPase-like~KEGG: dia:Dtpsy_1896 ATP-dependent Clp protease%2C ATP-binding subunit ClpA~SMART: AAA ATPase gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2660 Alide_2661 Alide_2661 Alide_2661 2747810 2748172 - ATP-dependent Clp protease adaptor protein ClpS PFAM: ATP-dependent Clp protease adaptor protein ClpS~KEGG: dia:Dtpsy_1897 ATP-dependent Clp protease adaptor protein ClpS gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2661 Alide_2662 Alide_2662 Alide_2662 2748232 2751780 - DNA polymerase III%2C alpha subunit SMART: phosphoesterase PHP domain protein~TIGRFAM: DNA polymerase III%2C alpha subunit~KEGG: dia:Dtpsy_1898 DNA polymerase III%2C alpha subunit~PFAM: DNA polymerase III alpha subunit%3B PHP domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2662 Alide_2663 Alide_2663 Alide_2663 2751909 2752706 + outer membrane assembly lipoprotein YfiO TIGRFAM: outer membrane assembly lipoprotein YfiO~KEGG: dia:Dtpsy_1899 outer membrane assembly lipoprotein YfiO gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2663 Alide_2664 Alide_2664 Alide_2664 2752669 2754741 - helicase c2 SMART: helicase c2~KEGG: ajs:Ajs_1828 helicase C2 gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2664 Alide_2665 Alide_2665 Alide_2665 2754859 2755662 + protein phosphatase 2C domain protein SMART: protein phosphatase 2C domain protein~KEGG: dia:Dtpsy_1901 protein serine/threonine phosphatase gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2665 Alide_2666 Alide_2666 Alide_2666 2755666 2756361 - hypothetical protein KEGG: ajs:Ajs_1826 hypothetical protein gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2666 Alide_2667 Alide_2667 Alide_2667 2756358 2757455 - AFG1-family ATPase PFAM: AFG1-family ATPase~KEGG: dia:Dtpsy_1903 AFG1-family ATPase gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2667 Alide_2668 Alide_2668 Alide_2668 2757532 2758959 - dihydrolipoamide dehydrogenase KEGG: ajs:Ajs_1824 dihydrolipoamide dehydrogenase~TIGRFAM: dihydrolipoamide dehydrogenase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2668 Alide_2669 Alide_2669 Alide_2669 2759045 2760301 - 2-oxoglutarate dehydrogenase%2C E2 subunit%2C dihydrolipoamide succinyltransferase KEGG: dia:Dtpsy_1905 2-oxoglutarate dehydrogenase%2C E2 subunit%2C dihydrolipoamide succinyltransferase~TIGRFAM: 2-oxoglutarate dehydrogenase%2C E2 subunit%2C dihydrolipoamide succinyltransferase~PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes%3B biotin/lipoyl attachment domain-containing protein%3B E3 binding domain protein gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2669 Alide_2670 Alide_2670 Alide_2670 2760354 2763230 - 2-oxoglutarate dehydrogenase%2C E1 subunit TIGRFAM: 2-oxoglutarate dehydrogenase%2C E1 subunit~KEGG: ajs:Ajs_1822 2-oxoglutarate dehydrogenase E1 component~PFAM: Transketolase central region%3B dehydrogenase E1 component gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2670 Alide_2671 Alide_2671 Alide_2671 2763436 2764494 + protein of unknown function UPF0118 PFAM: protein of unknown function UPF0118~KEGG: dia:Dtpsy_1907 protein of unknown function UPF0118 gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2671 Alide_2672 Alide_2672 Alide_2672 2764562 2765545 - hypothetical protein KEGG: dia:Dtpsy_1908 hypothetical protein gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2672 Alide_2673 Alide_2673 Alide_2673 2765596 2765958 - hypothetical protein KEGG: dia:Dtpsy_1909 hypothetical protein gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2673 Alide_2674 Alide_2674 Alide_2674 2765973 2767325 - protein of unknown function DUF1446 PFAM: protein of unknown function DUF1446~KEGG: dia:Dtpsy_1910 protein of unknown function DUF1446 gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2674 Alide_2675 Alide_2675 Alide_2675 2767418 2768323 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ajs:Ajs_1817 LysR family transcriptional regulator gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2675 Alide_2676 Alide_2676 Alide_2676 2768461 2769327 + UspA domain-containing protein PFAM: UspA domain-containing protein~KEGG: ajs:Ajs_1816 UspA domain-containing protein gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2676 Alide_2677 Alide_2677 Alide_2677 2769347 2770984 - ABC transporter related protein KEGG: dia:Dtpsy_1915 ABC transporter related~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2677 Alide_2678 Alide_2678 Alide_2678 2770986 2772026 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: dia:Dtpsy_1916 binding-protein-dependent transport systems inner membrane component gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2678 Alide_2679 Alide_2679 Alide_2679 2772010 2773047 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ajs:Ajs_1811 binding-protein-dependent transport systems inner membrane component gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2679 Alide_2680 Alide_2680 Alide_2680 2773065 2773526 - putative protein-S-isoprenylcysteine methyltransferase-like protein KEGG: dia:Dtpsy_2487 putative protein-S-isoprenylcysteine methyltransferase-like protein gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2680 Alide_2681 Alide_2681 Alide_2681 2773572 2775395 - extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: dia:Dtpsy_1918 extracellular solute-binding protein family 5 gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2681 Alide_2682 Alide_2682 Alide_2682 2775441 2776241 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_1919 short-chain dehydrogenase/reductase SDR gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2682 Alide_2683 Alide_2683 Alide_2683 2776337 2777245 + putative multidrug resistance efflux transporter KEGG: rsc:RCFBP_10755 putative multidrug resistance efflux transporter gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2683 Alide_2684 Alide_2684 Alide_2684 2777301 2777525 - protein of unknown function DUF465 PFAM: protein of unknown function DUF465~KEGG: cvi:CV_3311 hypothetical protein gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2684 Alide_2685 Alide_2685 Alide_2685 2777674 2778588 + DNA ligase (ATP) KEGG: dia:Dtpsy_2251 DNA ligase~PFAM: ATP dependent DNA ligase gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2685 Alide_2686 Alide_2686 Alide_2686 2778763 2779512 + Integral membrane protein TerC PFAM: Integral membrane protein TerC~KEGG: aav:Aave_4673 integral membrane protein TerC gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2686 Alide_2687 Alide_2687 Alide_2687 2779573 2781933 - Lysine decarboxylase KEGG: ajs:Ajs_2762 ornithine decarboxylase~PFAM: Orn/Lys/Arg decarboxylase major region%3B Orn/Lys/Arg decarboxylase domain protein gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2687 Alide_2688 Alide_2688 Alide_2688 2782082 2782513 + hypothetical protein KEGG: dia:Dtpsy_2253 hypothetical protein gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2688 Alide_2689 Alide_2689 Alide_2689 2782583 2783500 + band 7 protein KEGG: dia:Dtpsy_2254 band 7 protein~PFAM: band 7 protein~SMART: band 7 protein gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2689 Alide_2690 Alide_2690 Alide_2690 2783497 2784399 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: rfr:Rfer_0879 LysR family transcriptional regulator gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2690 Alide_2691 Alide_2691 Alide_2691 2784592 2786316 + thiamine pyrophosphate TPP-binding domain-containing protein PFAM: thiamine pyrophosphate TPP-binding domain-containing protein%3B thiamine pyrophosphate central domain-containing protein~KEGG: ajs:Ajs_2520 thiamine pyrophosphate protein gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2691 Alide_2692 Alide_2692 Alide_2692 2786959 2787291 + protein of unknown function UPF0060 PFAM: protein of unknown function UPF0060~KEGG: psa:PST_2099 putative inner membrane lipoprotein gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2692 Alide_2693 Alide_2693 Alide_2693 2787452 2788075 + integrase family protein PFAM: integrase family protein~KEGG: mpt:Mpe_A1729 phage integrase family protein gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2693 Alide_2694 Alide_2694 Alide_2694 2788342 2789073 + arsenical resistance protein ArsH KEGG: bch:Bcen2424_3197 NADPH-dependent FMN reductase~TIGRFAM: arsenical resistance protein ArsH~PFAM: NADPH-dependent FMN reductase gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2694 Alide_2695 Alide_2695 Alide_2695 2789090 2791894 + ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC KEGG: pol:Bpro_1191 ATPase%2C E1-E2 type~TIGRFAM: ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B cation transporting ATPase domain protein%3B Haloacid dehalogenase domain protein hydrolase gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2695 Alide_2696 Alide_2696 Alide_2696 2791936 2792454 + RNA polymerase sigma factor%2C sigma-70 family KEGG: pna:Pnap_2845 ECF subfamily RNA polymerase sigma-24 factor~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2 gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2696 Alide_2697 Alide_2697 Alide_2697 2792526 2792726 + hypothetical protein KEGG: shi:Shel_20950 haloacid dehalogenase superfamily enzyme%2C subfamily IA gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2697 Alide_2698 Alide_2698 Alide_2698 2792730 2793785 + permease PFAM: permease~KEGG: app:CAP2UW1_2749 permease gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2698 Alide_2699 Alide_2699 Alide_2699 2793820 2794053 + thiol-disulfide isomerase and thioredoxin KEGG: reu:Reut_B4599 thiol-disulfide isomerase and thioredoxins gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2699 Alide_2700 Alide_2700 Alide_2700 2794050 2794487 + OsmC family protein PFAM: OsmC family protein~KEGG: psa:PST_0230 redox protein%2C regulator of disulfide bond formation gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2700 Alide_2701 Alide_2701 Alide_2701 2794484 2795377 + cation diffusion facilitator family transporter KEGG: rfr:Rfer_3644 cation diffusion facilitator family transporter~TIGRFAM: cation diffusion facilitator family transporter~PFAM: cation efflux protein gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2701 Alide_2702 Alide_2702 Alide_2702 2795378 2796661 + hypothetical protein KEGG: rfr:Rfer_3651 hypothetical protein gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2702 Alide_2703 Alide_2703 Alide_2703 2796670 2797731 + glutamine amidotransferase class-II PFAM: glutamine amidotransferase class-II~KEGG: pol:Bpro_1189 glutamine amidotransferase%2C class-II gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2703 Alide_2704 Alide_2704 Alide_2704 2797824 2798912 + Oxidoreductase FAD-binding domain protein PFAM: Oxidoreductase FAD-binding domain protein%3B oxidoreductase FAD/NAD(P)-binding domain protein~KEGG: nis:NIS_0087 hypothetical protein gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2704 Alide_2705 Alide_2705 Alide_2705 2798930 2800114 + acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~KEGG: aeh:Mlg_2706 acetyl-CoA acetyltransferases~PFAM: Thiolase-like gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2705 Alide_2706 Alide_2706 Alide_2706 2800126 2800359 + hypothetical protein KEGG: eba:ebA4129 hypothetical protein gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2706 Alide_2707 Alide_2707 Alide_2707 2800366 2800605 - redox-active disulfide protein 2 KEGG: lch:Lcho_1324 redox-active disulfide protein 2 gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2707 Alide_2708 Alide_2708 Alide_2708 2800637 2802082 - permease PFAM: permease~KEGG: lch:Lcho_1323 permease gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2708 Alide_2709 Alide_2709 Alide_2709 2802549 2803547 - hypothetical protein manually curated~KEGG: ava:Ava_4263 hypothetical protein gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2709 Alide_2710 Alide_2710 Alide_2710 2803827 2804381 - hypothetical protein manually curated~KEGG: eum:ECUMN_2307 hypothetical protein gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2710 Alide_2711 Alide_2711 Alide_2711 2804418 2805332 - Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_0907 integrase catalytic subunit gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2711 Alide_2712 Alide_2712 Alide_2712 2805329 2805652 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2712 Alide_2714 Alide_2714 Alide_2714 2806679 2808694 - DNA topoisomerase III TIGRFAM: DNA topoisomerase III~PFAM: DNA topoisomerase type IA central domain protein%3B TOPRIM domain-containing protein%3B DNA topoisomerase type IA zn finger domain protein~KEGG: ajs:Ajs_2233 DNA topoisomerase III~SMART: DNA topoisomerase I DNA-binding%3B DNA topoisomerase I ATP-binding%3B Toprim sub domain-containing protein gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2714 Alide_2715 Alide_2715 Alide_2715 2808984 2809367 - single-strand binding protein/Primosomal replication protein n PFAM: single-strand binding protein/Primosomal replication protein n~KEGG: tmz:Tmz1t_0991 single-stranded DNA-binding protein gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2715 Alide_2716 Alide_2716 Alide_2716 2809364 2809909 - hypothetical protein KEGG: rpf:Rpic12D_0642 hypothetical protein gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2716 Alide_2717 Alide_2717 Alide_2717 2809906 2810691 - Domain of unknown function DUF1845 KEGG: rpf:Rpic12D_0641 hypothetical protein~TIGRFAM: Domain of unknown function DUF1845~PFAM: Domain of unknown function DUF1845 gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2717 Alide_2718 Alide_2718 Alide_2718 2810921 2812153 - hypothetical protein KEGG: rpf:Rpic12D_0640 hypothetical protein gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2718 Alide_2719 Alide_2719 Alide_2719 2812157 2812717 - hypothetical protein KEGG: rpf:Rpic12D_0639 hypothetical protein gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2719 Alide_2720 Alide_2720 Alide_2720 2812730 2814403 - hypothetical protein KEGG: rpf:Rpic12D_0638 hypothetical protein gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2720 Alide_2721 Alide_2721 Alide_2721 2814396 2814653 - hypothetical protein KEGG: rpf:Rpic12D_0637 hypothetical protein gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2721 Alide_2722 Alide_2722 Alide_2722 2814637 2815503 - cobyrinic acid ac-diamide synthase KEGG: rpf:Rpic12D_0636 cobyrinic acid ac-diamide synthase gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2722 Alide_2723 Alide_2723 Alide_2723 2815544 2815762 - Prophage CP4-57 regulatory PFAM: Prophage CP4-57 regulatory~KEGG: tmz:Tmz1t_1000 phage transcriptional regulator%2C AlpA gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2723 Alide_2724 Alide_2724 Alide_2724 2815887 2816645 - hypothetical protein KEGG: tmz:Tmz1t_1001 hypothetical protein gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2724 Alide_2725 Alide_2725 Alide_2725 2817208 2818104 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: rpf:Rpic12D_0633 transcriptional regulator%2C LysR family gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2725 Alide_2726 Alide_2726 Alide_2726 2818591 2821710 - heavy metal efflux pump%2C CzcA family KEGG: ajs:Ajs_1232 CzcA family heavy metal efflux protein~TIGRFAM: heavy metal efflux pump%2C CzcA family~PFAM: acriflavin resistance protein gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2726 Alide_2727 Alide_2727 Alide_2727 2821707 2823191 - efflux transporter%2C RND family%2C MFP subunit TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~KEGG: lch:Lcho_2049 RND family efflux transporter MFP subunit gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2727 Alide_2728 Alide_2728 Alide_2728 2823206 2824522 - CzcC family heavy metal RND efflux outer membrane protein KEGG: lch:Lcho_2050 CzcC family heavy metal RND efflux outer membrane protein gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2728 Alide_2729 Alide_2729 Alide_2729 2824598 2825134 - hypothetical protein KEGG: lch:Lcho_2051 hypothetical protein gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2729 Alide_2730 Alide_2730 Alide_2730 2825178 2825435 - hypothetical protein KEGG: maq:Maqu_0130 hypothetical protein gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2730 Alide_2731 Alide_2731 Alide_2731 2825474 2827816 - heavy metal translocating P-type ATPase KEGG: dia:Dtpsy_2191 heavy metal translocating P-type ATPase~TIGRFAM: heavy metal translocating P-type ATPase%3B copper-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B Haloacid dehalogenase domain protein hydrolase gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2731 Alide_2732 Alide_2732 Alide_2732 2827953 2829815 - hypothetical protein KEGG: ajs:Ajs_2709 hypothetical protein gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2732 Alide_2733 Alide_2733 Alide_2733 2829925 2830428 - cytochrome c class I PFAM: cytochrome c class I~KEGG: dia:Dtpsy_2192 cytochrome c class I gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2733 Alide_2734 Alide_2734 Alide_2734 2830484 2831131 - isoprenylcysteine carboxyl methyltransferase KEGG: dia:Dtpsy_2193 isoprenylcysteine carboxyl methyltransferase gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2734 Alide_2735 Alide_2735 Alide_2735 2831136 2831414 - hypothetical protein KEGG: dia:Dtpsy_2194 hypothetical protein gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2735 Alide_2736 Alide_2736 Alide_2736 2831425 2831895 - hypothetical protein KEGG: dia:Dtpsy_2195 hypothetical protein gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2736 Alide_2737 Alide_2737 Alide_2737 2831971 2832312 - hypothetical protein KEGG: ajs:Ajs_2667 hypothetical protein gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2737 Alide_2738 Alide_2738 Alide_2738 2832367 2832873 - blue (type 1) copper domain protein PFAM: blue (type 1) copper domain protein~KEGG: net:Neut_0023 blue (type1) copper domain-containing protein gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2738 Alide_2739 Alide_2739 Alide_2739 2832896 2833774 - copper resistance B precursor PFAM: copper resistance B precursor~KEGG: bmj:BMULJ_00902 copper resistance protein B gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2739 Alide_2740 Alide_2740 Alide_2740 2834101 2835960 - copper-resistance protein%2C CopA family KEGG: bmj:BMULJ_00903 copper resistance transmembrane protein~TIGRFAM: copper-resistance protein%2C CopA family~PFAM: multicopper oxidase type 3%3B multicopper oxidase type 1%3B multicopper oxidase type 2 gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2740 Alide_2741 Alide_2741 Alide_2741 2836085 2836768 + heavy metal response regulator TIGRFAM: heavy metal response regulator~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~KEGG: dia:Dtpsy_2201 two component heavy metal response transcriptional regulator%2C winged helix family~SMART: response regulator receiver gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2741 Alide_2742 Alide_2742 Alide_2742 2836769 2838172 + heavy metal sensor kinase TIGRFAM: heavy metal sensor kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~KEGG: ajs:Ajs_2726 heavy metal sensor signal transduction histidine kinase~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2742 Alide_2743 Alide_2743 Alide_2743 2838304 2838651 + hypothetical protein KEGG: ajs:Ajs_2662 hypothetical protein gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2743 Alide_2744 Alide_2744 Alide_2744 2838807 2838920 + protein of unknown function DUF411 KEGG: vap:Vapar_3675 protein of unknown function DUF411 gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2744 Alide_2745 Alide_2745 Alide_2745 2839094 2840773 + Bilirubin oxidase KEGG: net:Neut_0014 twin-arginine translocation pathway signal~PFAM: multicopper oxidase type 3%3B multicopper oxidase type 2 gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2745 Alide_2746 Alide_2746 Alide_2746 2840858 2841181 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: aav:Aave_4117 transposase IS3/IS911 family protein gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2746 Alide_2747 Alide_2747 Alide_2747 2841181 2842119 + Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: aav:Aave_4118 integrase catalytic subunit gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2747 Alide_2748 Alide_2748 Alide_2748 2842258 2842500 + hypothetical protein KEGG: aca:ACP_0600 hypothetical protein gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2748 Alide_2749 Alide_2749 Alide_2749 2842529 2843599 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: pen:PSEEN4649 hypothetical protein gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2749 Alide_2750 Alide_2750 Alide_2750 2843641 2845644 - heavy metal translocating P-type ATPase manually curated~TIGRFAM: heavy metal translocating P-type ATPase%3B cadmium-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~KEGG: xau:Xaut_4952 heavy metal translocating P-type ATPase~PFAM: E1-E2 ATPase-associated domain protein%3B Haloacid dehalogenase domain protein hydrolase gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2750 Alide_2751 Alide_2751 Alide_2751 2845705 2845983 - protein of unknown function DUF156 PFAM: protein of unknown function DUF156~KEGG: pde:Pden_3352 hypothetical protein gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2751 Alide_2752 Alide_2752 Alide_2752 2846141 2847049 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: rpf:Rpic12D_0613 transcriptional regulator%2C LysR family gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2752 Alide_2753 Alide_2753 Alide_2753 2847307 2847789 - helix-turn-helix domain protein KEGG: pol:Bpro_5021 XRE family transcriptional regulator~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2753 Alide_2754 Alide_2754 Alide_2754 2847887 2848222 - histone family protein DNA-binding protein KEGG: pol:Bpro_4958 histone-like DNA-binding protein~PFAM: histone family protein DNA-binding protein~SMART: histone family protein DNA-binding protein gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2754 Alide_2755 Alide_2755 Alide_2755 2848397 2848534 + transcriptional regulatory protein QseB KEGG: abb:ABBFA_001155 transcriptional regulatory protein QseB gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2755 Alide_2756 Alide_2756 Alide_2756 2848668 2848808 + hypothetical protein gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2756 Alide_2757 Alide_2757 Alide_2757 2848877 2849878 + hypothetical protein KEGG: dia:Dtpsy_0973 hypothetical protein gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2757 Alide_2758 Alide_2758 Alide_2758 2849895 2850851 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dac:Daci_2361 LysR family transcriptional regulator gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2758 Alide_2759 Alide_2759 Alide_2759 2850892 2851983 + tartrate dehydrogenase TIGRFAM: tartrate dehydrogenase~KEGG: aav:Aave_2087 tartrate dehydrogenase~PFAM: isocitrate/isopropylmalate dehydrogenase gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2759 Alide_2760 Alide_2760 Alide_2760 2852155 2853174 + Patatin PFAM: Patatin~KEGG: dac:Daci_3706 patatin gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2760 Alide_2761 Alide_2761 Alide_2761 2853176 2854138 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: aav:Aave_2084 LysR family transcriptional regulator gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2761 Alide_2762 Alide_2762 Alide_2762 2854238 2855227 + conserved hypothetical protein KEGG: ctt:CtCNB1_3468 TctC gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2762 Alide_2763 Alide_2763 Alide_2763 2855224 2856747 + Galactarate dehydratase KEGG: ctt:CtCNB1_3469 outer membrane protein precursor~PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein%3B SAF domain protein gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2763 Alide_2764 Alide_2764 Alide_2764 2856814 2858283 + succinic semialdehyde dehydrogenase KEGG: dac:Daci_2346 succinic semialdehyde dehydrogenase~TIGRFAM: succinic semialdehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2764 Alide_2765 Alide_2765 Alide_2765 2858290 2859093 + 4-hydroxy-2-oxovalerate aldolase KEGG: ctt:CtCNB1_3471 2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase~PFAM: HpcH/HpaI aldolase gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2765 Alide_2766 Alide_2766 Alide_2766 2859294 2859917 + protein of unknown function DUF938 PFAM: protein of unknown function DUF938~KEGG: dia:Dtpsy_2352 protein of unknown function DUF938 gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2766 Alide_2767 Alide_2767 Alide_2767 2859958 2860821 + glutamate racemase TIGRFAM: glutamate racemase~KEGG: ajs:Ajs_2867 glutamate racemase~PFAM: Asp/Glu/hydantoin racemase gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2767 Alide_2768 Alide_2768 Alide_2768 2860818 2861639 - N-formylglutamate amidohydrolase KEGG: aav:Aave_2959 N-formylglutamate amidohydrolase~TIGRFAM: N-formylglutamate amidohydrolase~PFAM: N-formylglutamate amidohydrolase gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2768 Alide_2769 Alide_2769 Alide_2769 2861668 2863101 - formiminoglutamate deiminase KEGG: dac:Daci_0155 N-formimino-L-glutamate deiminase~TIGRFAM: formiminoglutamate deiminase~PFAM: amidohydrolase gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2769 Alide_2770 Alide_2770 Alide_2770 2863106 2864344 - imidazolonepropionase TIGRFAM: imidazolonepropionase~KEGG: pol:Bpro_1035 imidazolonepropionase~PFAM: amidohydrolase gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2770 Alide_2771 Alide_2771 Alide_2771 2864670 2865272 - protein of unknown function DUF886 PFAM: protein of unknown function DUF886~KEGG: aav:Aave_2962 hypothetical protein gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2771 Alide_2772 Alide_2772 Alide_2772 2865278 2866060 - ABC transporter related protein KEGG: pol:Bpro_1038 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2772 Alide_2773 Alide_2773 Alide_2773 2866057 2866725 - polar amino acid ABC transporter%2C inner membrane subunit KEGG: pol:Bpro_1039 amino acid ABC transporter permease~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2773 Alide_2774 Alide_2774 Alide_2774 2866740 2867495 - extracellular solute-binding protein family 3 KEGG: pol:Bpro_1040 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3%3B ionotropic glutamate receptor gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2774 Alide_2775 Alide_2775 Alide_2775 2867539 2868318 - regulatory protein IclR KEGG: pol:Bpro_1041 IclR family transcriptional regulator~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2775 Alide_2776 Alide_2776 Alide_2776 2868407 2870128 - urocanate hydratase TIGRFAM: urocanate hydratase~KEGG: dac:Daci_0150 urocanate hydratase~PFAM: Urocanase gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2776 Alide_2777 Alide_2777 Alide_2777 2870172 2871650 - permease for cytosine/purines uracil thiamine allantoin PFAM: permease for cytosine/purines uracil thiamine allantoin~KEGG: ctt:CtCNB1_0166 cytosine/purines/uracil permease gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2777 Alide_2778 Alide_2778 Alide_2778 2871793 2872518 + histidine utilization repressor TIGRFAM: histidine utilization repressor~PFAM: UbiC transcription regulator-associated domain-containing protein%3B regulatory protein GntR HTH~KEGG: ctt:CtCNB1_0165 transcriptional regulator%2C histidine~SMART: regulatory protein GntR HTH gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2778 Alide_2779 Alide_2779 Alide_2779 2872519 2874108 - histidine ammonia-lyase TIGRFAM: histidine ammonia-lyase~KEGG: aav:Aave_2965 histidine ammonia-lyase~PFAM: phenylalanine/histidine ammonia-lyase gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2779 Alide_2780 Alide_2780 Alide_2780 2874172 2874954 - histidine utilization repressor TIGRFAM: histidine utilization repressor~PFAM: UbiC transcription regulator-associated domain-containing protein%3B regulatory protein GntR HTH~KEGG: aav:Aave_2966 histidine utilization repressor~SMART: regulatory protein GntR HTH gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2780 Alide_2781 Alide_2781 Alide_2781 2874971 2875753 - ABC transporter related protein KEGG: aav:Aave_2967 ABC transporter-related protein~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2781 Alide_2782 Alide_2782 Alide_2782 2875753 2876592 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: aav:Aave_2968 binding-protein-dependent transport systems inner membrane component gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2782 Alide_2783 Alide_2783 Alide_2783 2876618 2877583 - substrate-binding region of ABC-type glycine betaine transport system KEGG: aav:Aave_2969 substrate-binding region of ABC-type glycine betaine transport system gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2783 Alide_2784 Alide_2784 Alide_2784 2877791 2878948 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: dac:Daci_0142 acyl-CoA dehydrogenase domain-containing protein gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2784 Alide_2785 Alide_2785 Alide_2785 2878987 2880198 - Formyl-CoA transferase KEGG: dac:Daci_0143 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: L-carnitine dehydratase/bile acid-inducible protein F gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2785 Alide_2786 Alide_2786 Alide_2786 2880290 2881216 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ctt:CtCNB1_0157 L-carnitine dehydratase/bile acid-inducible gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2786 Alide_2787 Alide_2787 Alide_2787 2881244 2882227 - hypothetical protein KEGG: ajs:Ajs_2869 hypothetical protein gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2787 Alide_2788 Alide_2788 Alide_2788 2882272 2883261 - hypothetical protein KEGG: dia:Dtpsy_2357 hypothetical protein gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2788 Alide_2789 Alide_2789 Alide_2789 2883304 2884275 - pyruvate carboxyltransferase PFAM: pyruvate carboxyltransferase~KEGG: dia:Dtpsy_2358 pyruvate carboxyltransferase gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2789 Alide_2790 Alide_2790 Alide_2790 2884272 2885477 - Formyl-CoA transferase KEGG: dia:Dtpsy_2359 L-carnitine dehydratase/bile acid-inducible protein F~PFAM: L-carnitine dehydratase/bile acid-inducible protein F gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2790 Alide_2791 Alide_2791 Alide_2791 2885605 2886507 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ajs:Ajs_2873 LysR family transcriptional regulator gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2791 Alide_2792 Alide_2792 Alide_2792 2886504 2887586 + Uncharacterized conserved protein UCP015557 KEGG: ajs:Ajs_2874 hypothetical protein~TIGRFAM: Uncharacterised conserved protein UCP015557~PFAM: Uncharacterised conserved protein UCP015557 gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2792 Alide_2793 Alide_2793 Alide_2793 2887746 2888300 + translation elongation factor P KEGG: dia:Dtpsy_2362 elongation factor P~TIGRFAM: translation elongation factor P~PFAM: Elongation factor P %3B Elongation factor KOW-like domain-containing protein%3B Elongation factor P/YeiP protein gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2793 Alide_2794 Alide_2794 Alide_2794 2888374 2888832 - hypothetical protein KEGG: ajs:Ajs_2876 hypothetical protein gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2794 Alide_2795 Alide_2795 Alide_2795 2888953 2891037 - putative sodium symporter protein KEGG: dia:Dtpsy_2364 calcium-binding EF-hand-containing protein~TIGRFAM: putative sodium symporter protein~PFAM: Na+/solute symporter gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2795 Alide_2796 Alide_2796 Alide_2796 2891030 2891347 - putative solute symporter protein TIGRFAM: putative solute symporter protein~KEGG: ajs:Ajs_2878 hypothetical protein gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2796 Alide_2797 Alide_2797 Alide_2797 2891364 2893754 - phosphoenolpyruvate synthase KEGG: dia:Dtpsy_2366 phosphoenolpyruvate synthase~TIGRFAM: phosphoenolpyruvate synthase~PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding%3B PEP-utilising protein mobile region%3B PEP-utilizing protein gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2797 Alide_2798 Alide_2798 Alide_2798 2893977 2894807 + protein of unknown function DUF299 PFAM: protein of unknown function DUF299~KEGG: dia:Dtpsy_2367 hypothetical protein gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2798 Alide_2799 Alide_2799 Alide_2799 2894841 2897960 - heavy metal efflux pump%2C CzcA family KEGG: tmz:Tmz1t_2382 heavy metal efflux pump%2C CzcA family~TIGRFAM: heavy metal efflux pump%2C CzcA family~PFAM: acriflavin resistance protein gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2799 Alide_2800 Alide_2800 Alide_2800 2897974 2899086 - hypothetical protein KEGG: ajs:Ajs_1330 hypothetical protein gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2800 Alide_2801 Alide_2801 Alide_2801 2899083 2899628 - hypothetical protein KEGG: dia:Dtpsy_1144 hypothetical protein gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2801 Alide_2802 Alide_2802 Alide_2802 2899736 2901004 - outer membrane efflux protein PFAM: outer membrane efflux protein~KEGG: ajs:Ajs_1332 outer membrane efflux protein gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2802 Alide_2803 Alide_2803 Alide_2803 2901186 2901563 - hypothetical protein KEGG: mpt:Mpe_A2670 hypothetical protein gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2803 Alide_2804 Alide_2804 Alide_2804 2901619 2903076 - Catalase KEGG: meh:M301_0051 catalase~PFAM: Catalase related subgroup%3B Catalase domain protein gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2804 Alide_2805 Alide_2805 Alide_2805 2903145 2904713 - alkyl hydroperoxide reductase%2C F subunit KEGG: aav:Aave_1376 FAD-dependent pyridine nucleotide-disulphide oxidoreductase~TIGRFAM: alkyl hydroperoxide reductase%2C F subunit~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B glutaredoxin gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2805 Alide_2806 Alide_2806 Alide_2806 2904809 2905384 - peroxiredoxin TIGRFAM: peroxiredoxin~KEGG: aav:Aave_1375 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen~PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Peroxiredoxin-like gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2806 Alide_2807 Alide_2807 Alide_2807 2905600 2906076 + bacterioferritin KEGG: dia:Dtpsy_2370 bacterioferritin~TIGRFAM: bacterioferritin~PFAM: Ferritin Dps family protein gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2807 Alide_2808 Alide_2808 Alide_2808 2906303 2906632 + flagellar transcriptional activator PFAM: flagellar transcriptional activator~KEGG: ajs:Ajs_2884 flagellar transcriptional activator%2C FlhD subunit gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2808 Alide_2809 Alide_2809 Alide_2809 2906669 2907208 + flagellar transcriptional activator FlhC PFAM: flagellar transcriptional activator FlhC~KEGG: ajs:Ajs_2885 transcriptional activator FlhC gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2809 Alide_2810 Alide_2810 Alide_2810 2907241 2910084 - Phosphoenolpyruvate carboxylase KEGG: dia:Dtpsy_2376 phosphoenolpyruvate carboxylase~PFAM: Phosphoenolpyruvate carboxylase%2C C-terminal region gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2810 Alide_2811 Alide_2811 Alide_2811 2910204 2911133 + porphobilinogen deaminase TIGRFAM: porphobilinogen deaminase~KEGG: dia:Dtpsy_2377 porphobilinogen deaminase~PFAM: Porphobilinogen deaminase gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2811 Alide_2812 Alide_2812 Alide_2812 2911127 2911951 + uroporphyrinogen-III synthase KEGG: ajs:Ajs_2891 uroporphyrinogen-III synthase gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2812 Alide_2813 Alide_2813 Alide_2813 2911941 2913020 + protein of unknown function DUF513 hemX PFAM: protein of unknown function DUF513 hemX~KEGG: ajs:Ajs_2892 protein of unknown function DUF513%2C HemX gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2813 Alide_2814 Alide_2814 Alide_2814 2913046 2914335 + HemY domain protein PFAM: HemY domain protein~KEGG: ajs:Ajs_2893 HemY domain-containing protein gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2814 Alide_2815 Alide_2815 Alide_2815 2914589 2916244 + Cytochrome-c oxidase KEGG: net:Neut_1582 cytochrome c oxidase%2C subunit I~PFAM: cytochrome c oxidase subunit I gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2815 Alide_2816 Alide_2816 Alide_2816 2916234 2916881 + cytochrome C oxidase mono-heme subunit/FixO PFAM: cytochrome C oxidase mono-heme subunit/FixO~KEGG: net:Neut_1583 cytochrome c oxidase%2C mono-heme subunit/FixO gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2816 Alide_2817 Alide_2817 Alide_2817 2916895 2917488 + cytochrome c class I PFAM: cytochrome c class I~KEGG: net:Neut_1584 cytochrome c%2C class I gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2817 Alide_2818 Alide_2818 Alide_2818 2917496 2918131 + hypothetical protein KEGG: net:Neut_1585 hypothetical protein gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2818 Alide_2819 Alide_2819 Alide_2819 2918128 2918733 + hypothetical protein KEGG: pol:Bpro_1263 hypothetical protein gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2819 Alide_2820 Alide_2820 Alide_2820 2918879 2921767 + valyl-tRNA synthetase KEGG: dia:Dtpsy_2382 valyl-tRNA synthetase~TIGRFAM: valyl-tRNA synthetase gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2820 Alide_2821 Alide_2821 Alide_2821 2921875 2922759 + UTP-glucose-1-phosphate uridylyltransferase KEGG: dia:Dtpsy_2383 UTP-glucose-1-phosphate uridylyltransferase~TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase~PFAM: Nucleotidyl transferase gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2821 Alide_2822 Alide_2822 Alide_2822 2922890 2923117 - SirA-like domain-containing protein PFAM: SirA-like domain-containing protein~KEGG: dia:Dtpsy_2384 SirA family protein gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2822 Alide_2823 Alide_2823 Alide_2823 2923123 2923686 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: dia:Dtpsy_2385 NUDIX hydrolase gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2823 Alide_2824 Alide_2824 Alide_2824 2923692 2924597 - cysteine synthase B KEGG: dia:Dtpsy_2386 cysteine synthase B~TIGRFAM: cysteine synthase B%3B cysteine synthase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2824 Alide_2825 Alide_2825 Alide_2825 2925208 2925450 - Protein of unknown function DUF2274 PFAM: Protein of unknown function DUF2274~KEGG: ajs:Ajs_2901 hypothetical protein gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2825 Alide_2826 Alide_2826 Alide_2826 2925447 2926718 - conjugation TrbI family protein PFAM: conjugation TrbI family protein~KEGG: rpi:Rpic_2653 conjugation TrbI family protein gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2826 Alide_2827 Alide_2827 Alide_2827 2926721 2927713 - P-type conjugative transfer protein TrbG KEGG: dia:Dtpsy_3498 P-type conjugative transfer protein TrbG~TIGRFAM: P-type conjugative transfer protein TrbG~PFAM: Conjugal transfer protein TrbG/VirB9/CagX gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2827 Alide_2828 Alide_2828 Alide_2828 2927710 2928414 - conjugal transfer protein TrbF KEGG: dia:Dtpsy_3499 conjugal transfer protein TrbF gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2828 Alide_2829 Alide_2829 Alide_2829 2928433 2929785 - P-type conjugative transfer protein TrbL KEGG: dia:Dtpsy_3500 conjugal transfer protein TrbL~TIGRFAM: P-type conjugative transfer protein TrbL~PFAM: TrbL/VirB6 plasmid conjugal transfer protein gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2829 Alide_2830 Alide_2830 Alide_2830 2929782 2930096 - putative lipoprotein KEGG: dac:Daci_2694 putative lipoprotein gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2830 Alide_2831 Alide_2831 Alide_2831 2930108 2930863 - P-type conjugative transfer protein TrbJ TIGRFAM: P-type conjugative transfer protein TrbJ~KEGG: dia:Dtpsy_3502 conjugal transfer protein TrbJ gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2831 Alide_2832 Alide_2832 Alide_2832 2930860 2933319 - CagE%2C TrbE%2C VirB component of type IV transporter system%2C conserved region protein KEGG: tgr:Tgr7_1898 conjugal transfer ATPase TrbE~PFAM: CagE%2C TrbE%2C VirB component of type IV transporter system%2C conserved region~SMART: AAA ATPase gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2832 Alide_2833 Alide_2833 Alide_2833 2933334 2933606 - putative conjugal transfer TrbD transmembrane protein KEGG: rme:Rmet_1343 putative conjugal transfer TrbD transmembrane protein gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2833 Alide_2834 Alide_2834 Alide_2834 2933603 2933989 - Conjugal transfer protein TrbC PFAM: Conjugal transfer protein TrbC~KEGG: dia:Dtpsy_3505 conjugal transfer protein TrbC gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2834 Alide_2835 Alide_2835 Alide_2835 2933986 2935038 - P-type conjugative transfer ATPase TrbB KEGG: sml:Smlt1291 putative conjugal transfer protein~TIGRFAM: P-type conjugative transfer ATPase TrbB~PFAM: type II secretion system protein E gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2835 Alide_2836 Alide_2836 Alide_2836 2935035 2935499 - CopG/DNA-binding domain-containing protein KEGG: dac:Daci_2700 CopG/DNA-binding domain-containing protein gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2836 Alide_2837 Alide_2837 Alide_2837 2935496 2937502 - TRAG family protein PFAM: TRAG family protein~KEGG: dac:Daci_2701 conjugal transfer coupling protein TraG gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2837 Alide_2838 Alide_2838 Alide_2838 2937746 2937973 - hypothetical protein KEGG: dia:Dtpsy_3509 hypothetical protein gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2838 Alide_2839 Alide_2839 Alide_2839 2937987 2938913 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dia:Dtpsy_1314 transcriptional regulator%2C LysR family gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2839 Alide_2840 Alide_2840 Alide_2840 2939105 2941129 - hypothetical protein manually curated~KEGG: dia:Dtpsy_1313 hypothetical protein gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2840 Alide_2841 Alide_2841 Alide_2841 2941203 2942177 - Phosphate acetyltransferase manually curated~KEGG: dia:Dtpsy_1312 phosphate butyryltransferase~PFAM: phosphate acetyl/butaryl transferase gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2841 Alide_2842 Alide_2842 Alide_2842 2942170 2942733 - UspA domain-containing protein PFAM: UspA domain-containing protein~KEGG: dia:Dtpsy_1311 UspA domain protein gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2842 Alide_2843 Alide_2843 Alide_2843 2942802 2943548 - acetoacetyl-CoA reductase KEGG: dia:Dtpsy_1310 acetoacetyl-CoA reductase~TIGRFAM: acetoacetyl-CoA reductase~PFAM: short-chain dehydrogenase/reductase SDR gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2843 Alide_2844 Alide_2844 Alide_2844 2943559 2944002 - hypothetical protein KEGG: dia:Dtpsy_1309 hypothetical protein gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2844 Alide_2845 Alide_2845 Alide_2845 2944110 2945867 - Poly-beta-hydroxybutyrate polymerase domain protein PFAM: Poly-beta-hydroxybutyrate polymerase domain protein%3B alpha/beta hydrolase fold~KEGG: dia:Dtpsy_1308 poly-beta-hydroxybutyrate polymerase domain protein gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2845 Alide_2846 Alide_2846 Alide_2846 2946189 2946797 + regulatory protein TetR PFAM: regulatory protein TetR~KEGG: dia:Dtpsy_1307 transcriptional regulator%2C TetR family gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2846 Alide_2847 Alide_2847 Alide_2847 2946866 2947285 + hypothetical protein KEGG: dia:Dtpsy_1306 hypothetical protein gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2847 Alide_2848 Alide_2848 Alide_2848 2947313 2948353 + secretion protein HlyD family protein PFAM: secretion protein HlyD family protein~KEGG: dia:Dtpsy_1305 hypothetical protein gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2848 Alide_2849 Alide_2849 Alide_2849 2948355 2950127 + ABC transporter related protein KEGG: dia:Dtpsy_1304 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2849 Alide_2850 Alide_2850 Alide_2850 2950124 2951293 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: dia:Dtpsy_1303 ABC-2 type transporter gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2850 Alide_2851 Alide_2851 Alide_2851 2951298 2952416 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: dia:Dtpsy_1302 ABC-2 type transporter gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2851 Alide_2852 Alide_2852 Alide_2852 2952413 2954062 + RND efflux system%2C outer membrane lipoprotein%2C NodT family KEGG: dia:Dtpsy_1301 RND efflux system%2C outer membrane lipoprotein%2C NodT family~TIGRFAM: RND efflux system%2C outer membrane lipoprotein%2C NodT family~PFAM: outer membrane efflux protein gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2852 Alide_2853 Alide_2853 Alide_2853 2954059 2955210 + iron-containing alcohol dehydrogenase PFAM: iron-containing alcohol dehydrogenase~KEGG: eba:ebA4623 alcohol dehydrogenase II gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2853 Alide_2854 Alide_2854 Alide_2854 2955264 2955473 + hypothetical protein KEGG: dia:Dtpsy_1300 hypothetical protein gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2854 Alide_2855 Alide_2855 Alide_2855 2955481 2956893 + RNA-metabolising metallo-beta-lactamase PFAM: RNA-metabolising metallo-beta-lactamase~KEGG: dia:Dtpsy_1299 beta-lactamase domain protein gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2855 Alide_2856 Alide_2856 Alide_2856 2956890 2957756 + Conserved hypothetical protein CHP00730 PFAM: Conserved hypothetical protein CHP00730~KEGG: dia:Dtpsy_1298 hypothetical protein gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2856 Alide_2857 Alide_2857 Alide_2857 2957753 2958952 + Protein of unknown function DUF2219 PFAM: Protein of unknown function DUF2219~KEGG: dia:Dtpsy_1297 hypothetical protein gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2857 Alide_2858 Alide_2858 Alide_2858 2959160 2959474 + hypothetical protein KEGG: dia:Dtpsy_1296 hypothetical protein gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2858 Alide_2859 Alide_2859 Alide_2859 2959514 2960722 + acetate kinase TIGRFAM: acetate kinase~KEGG: dia:Dtpsy_1295 acetate kinase~PFAM: acetate and butyrate kinase gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2859 Alide_2860 Alide_2860 Alide_2860 2960806 2963178 + D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase%3B Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase-like~KEGG: dia:Dtpsy_1294 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2860 Alide_2861 Alide_2861 Alide_2861 2963223 2963582 - pseudogene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2861 Alide_2862 Alide_2862 Alide_2862 2963691 2964170 - hypothetical protein KEGG: ajs:Ajs_2417 hypothetical protein gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2862 Alide_2863 Alide_2863 Alide_2863 2964294 2964755 - hypothetical protein KEGG: dia:Dtpsy_1431 hypothetical protein gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2863 Alide_2864 Alide_2864 Alide_2864 2964752 2965219 - putative transmembrane anti-sigma factor KEGG: dia:Dtpsy_1432 putative transmembrane anti-sigma factor gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2864 Alide_2865 Alide_2865 Alide_2865 2965235 2965789 - RNA polymerase sigma factor%2C sigma-70 family KEGG: dia:Dtpsy_1433 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2 gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2865 Alide_2866 Alide_2866 Alide_2866 2966048 2966458 + hypothetical protein KEGG: dia:Dtpsy_3434 hypothetical protein gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2866 Alide_2867 Alide_2867 Alide_2867 2966488 2966964 + hypothetical protein KEGG: dia:Dtpsy_3435 hypothetical protein gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2867 Alide_2868 Alide_2868 Alide_2868 2966975 2969179 + flavodoxin/nitric oxide synthase PFAM: flavodoxin/nitric oxide synthase%3B Oxidoreductase FAD-binding domain protein%3B oxidoreductase FAD/NAD(P)-binding domain protein~KEGG: ajs:Ajs_4088 oxidoreductase FAD/NAD(P)-binding subunit gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2868 Alide_2869 Alide_2869 Alide_2869 2969184 2970137 + ApbE family lipoprotein KEGG: dia:Dtpsy_3437 ApbE family lipoprotein~manually curated~PFAM: ApbE family lipoprotein gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2869 Alide_2870 Alide_2870 Alide_2870 2970236 2970745 + hypothetical protein KEGG: dia:Dtpsy_3438 hypothetical protein gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2870 Alide_2871 Alide_2871 Alide_2871 2970884 2971459 + cytochrome b561 KEGG: psa:PST_0904 cytochrome b561 gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2871 Alide_2872 Alide_2872 Alide_2872 2971556 2972320 + cyclic nucleotide-binding protein KEGG: sti:Sthe_3401 transcriptional regulator%2C Crp/Fnr family~PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~SMART: cyclic nucleotide-binding%3B regulatory protein Crp gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2872 Alide_2873 Alide_2873 Alide_2873 2972431 2972661 + Heavy metal transport/detoxification protein PFAM: Heavy metal transport/detoxification protein~KEGG: mlu:Mlut_09570 copper chaperone gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2873 Alide_2874 Alide_2874 Alide_2874 2972768 2974687 + heavy metal translocating P-type ATPase KEGG: nca:Noca_1662 heavy metal translocating P-type ATPase~TIGRFAM: heavy metal translocating P-type ATPase%3B cadmium-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B Haloacid dehalogenase domain protein hydrolase gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2874 Alide_2875 Alide_2875 Alide_2875 2974882 2976867 - hypothetical protein KEGG: dac:Daci_0453 hypothetical protein gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2875 Alide_2876 Alide_2876 Alide_2876 2977316 2977903 - Peptidase S26%2C conserved region protein PFAM: Peptidase S26%2C conserved region~KEGG: rme:Rmet_1258 TraF peptidase gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2876 Alide_2877 Alide_2877 Alide_2877 2977900 2978445 - hypothetical protein KEGG: rme:Rmet_1257 hypothetical protein gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2877 Alide_2878 Alide_2878 Alide_2878 2978442 2978567 - pseudogene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2878 Alide_2879 Alide_2879 Alide_2879 2978601 2979515 - Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_0907 integrase catalytic subunit gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2879 Alide_2880 Alide_2880 Alide_2880 2979512 2979835 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2880 Alide_2881 Alide_2881 Alide_2881 2979866 2980054 - integrase protein KEGG: bte:BTH_I0807 integrase protein gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2881 Alide_2882 Alide_2882 Alide_2882 2980386 2980529 + pseudogene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2882 Alide_2883 Alide_2883 Alide_2883 2980531 2981367 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: pol:Bpro_1631 enoyl-CoA hydratase/isomerase gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2883 Alide_2884 Alide_2884 Alide_2884 2981510 2982103 + transcriptional regulator KEGG: azc:AZC_4590 transcriptional regulator gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2884 Alide_2885 Alide_2885 Alide_2885 2982153 2983682 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: rlt:Rleg2_6334 AMP-dependent synthetase and ligase gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2885 Alide_2886 Alide_2886 Alide_2886 2983733 2984692 - pyruvate carboxyltransferase PFAM: pyruvate carboxyltransferase~KEGG: pol:Bpro_5269 hydroxymethylglutaryl-CoA lyase gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2886 Alide_2887 Alide_2887 Alide_2887 2984708 2986714 - Carbamoyl-phosphate synthase L chain ATP-binding protein PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B biotin carboxylase domain protein%3B biotin/lipoyl attachment domain-containing protein~KEGG: pol:Bpro_5270 carbamoyl-phosphate synthase L chain%2C ATP-binding gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2887 Alide_2888 Alide_2888 Alide_2888 2986723 2988303 - Methylcrotonoyl-CoA carboxylase KEGG: pol:Bpro_5271 carboxyl transferase~PFAM: carboxyl transferase gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2888 Alide_2889 Alide_2889 Alide_2889 2988323 2989684 - Phenylacetate--CoA ligase KEGG: rxy:Rxyl_1851 phenylacetate-CoA ligase gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2889 Alide_2890 Alide_2890 Alide_2890 2989784 2990569 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: vei:Veis_3871 enoyl-CoA hydratase/isomerase gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2890 Alide_2891 Alide_2891 Alide_2891 2990696 2991916 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: mno:Mnod_4450 extracellular ligand-binding receptor gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2891 Alide_2892 Alide_2892 Alide_2892 2992277 2994199 - PpiC-type peptidyl-prolyl cis-trans isomerase PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase~KEGG: dia:Dtpsy_1188 PpiC-type peptidyl-prolyl cis-trans isomerase gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2892 Alide_2893 Alide_2893 Alide_2893 2994349 2994621 - histone family protein DNA-binding protein KEGG: dia:Dtpsy_1187 histone family protein DNA-binding protein~PFAM: histone family protein DNA-binding protein~SMART: histone family protein DNA-binding protein gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2893 Alide_2894 Alide_2894 Alide_2894 2994966 2995553 - CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase~KEGG: dia:Dtpsy_1186 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2894 Alide_2895 Alide_2895 Alide_2895 2995583 2997541 - excinuclease ABC%2C C subunit TIGRFAM: excinuclease ABC%2C C subunit~PFAM: excinuclease ABC C subunit domain protein%3B Excinuclease ABC C subunit domain protein%3B UvrB/UvrC protein~KEGG: dia:Dtpsy_1185 excinuclease ABC subunit C~SMART: Excinuclease ABC C subunit domain protein%3B Helix-hairpin-helix DNA-binding class 1 gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2895 Alide_2896 Alide_2896 Alide_2896 2997666 2998295 - hypothetical protein KEGG: ajs:Ajs_2624 hypothetical protein gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2896 Alide_2897 Alide_2897 Alide_2897 2998769 2999998 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: azo:azo3693 hypothetical protein gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2897 Alide_2898 Alide_2898 Alide_2898 3000014 3000286 - histone family protein nucleoid-structuring protein H-NS KEGG: ctt:CtCNB1_0646 histone-like nucleoid-structuring protein H-NS~PFAM: histone family protein nucleoid-structuring protein H-NS~SMART: histone family protein nucleoid-structuring protein H-NS gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2898 Alide_2899 Alide_2899 Alide_2899 3000368 3001165 + regulatory protein IclR KEGG: reh:H16_A2948 IclR family transcriptional regulator~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2899 Alide_2900 Alide_2900 Alide_2900 3001418 3002191 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: dac:Daci_0266 short-chain dehydrogenase/reductase SDR gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2900 Alide_2901 Alide_2901 Alide_2901 3002214 3003440 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: tin:Tint_1589 acyl-CoA dehydrogenase domain protein gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2901 Alide_2902 Alide_2902 Alide_2902 3003450 3005150 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: tin:Tint_1587 AMP-dependent synthetase and ligase gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2902 Alide_2903 Alide_2903 Alide_2903 3005291 3006457 - Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: dac:Daci_0264 extracellular ligand-binding receptor gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2903 Alide_2904 Alide_2904 Alide_2904 3006502 3007209 - ABC transporter related protein KEGG: dac:Daci_0263 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2904 Alide_2905 Alide_2905 Alide_2905 3007196 3007960 - ABC transporter related protein KEGG: dac:Daci_0262 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2905 Alide_2906 Alide_2906 Alide_2906 3007947 3008921 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dac:Daci_0261 inner-membrane translocator gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2906 Alide_2907 Alide_2907 Alide_2907 3008922 3009785 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dac:Daci_0260 inner-membrane translocator gene gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2907 Alide_2908 Alide_2908 Alide_2908 3010384 3011352 + hypothetical protein KEGG: reu:Reut_B3884 hypothetical protein gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2908 Alide_2909 Alide_2909 Alide_2909 3011417 3012472 + porin Gram-negative type PFAM: porin Gram-negative type~KEGG: bcm:Bcenmc03_6621 porin gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2909 Alide_2910 Alide_2910 Alide_2910 3012514 3012999 + protein of unknown function DUF894 DitE KEGG: aav:Aave_4649 protein of unknown function DUF894%2C DitE~manually curated~PFAM: protein of unknown function DUF894 DitE gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2910 Alide_2911 Alide_2911 Alide_2911 3013106 3013915 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: bbr:BB0629 enoyl-CoA hydratase gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2911 Alide_2912 Alide_2912 Alide_2912 3014011 3015504 + Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: bur:Bcep18194_C7306 aldehyde dehydrogenase (acceptor) gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2912 Alide_2913 Alide_2913 Alide_2913 3015593 3017071 + Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: bur:Bcep18194_C7305 aldehyde dehydrogenase (acceptor) gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2913 Alide_2914 Alide_2914 Alide_2914 3017142 3018548 + MmgE/PrpD family protein PFAM: MmgE/PrpD family protein~KEGG: bpa:BPP0622 hypothetical protein gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2914 Alide_2915 Alide_2915 Alide_2915 3018572 3019543 + hypothetical protein KEGG: bbr:BB0625 hypothetical protein gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2915 Alide_2916 Alide_2916 Alide_2916 3019726 3019935 + hydroxyacylglutathione hydrolase KEGG: ank:AnaeK_1894 hydroxyacylglutathione hydrolase gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2916 Alide_2917 Alide_2917 Alide_2917 3019943 3021430 + Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: bur:Bcep18194_C6756 aldehyde dehydrogenase (acceptor) gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2917 Alide_2918 Alide_2918 Alide_2918 3021448 3022518 + Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: bur:Bcep18194_C7304 zinc-containing alcohol dehydrogenase superfamily protein gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2918 Alide_2919 Alide_2919 Alide_2919 3022605 3023738 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: jan:Jann_2263 extracellular ligand-binding receptor gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2919 Alide_2920 Alide_2920 Alide_2920 3023817 3024710 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: jan:Jann_2267 inner-membrane translocator gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2920 Alide_2921 Alide_2921 Alide_2921 3024715 3025608 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: jan:Jann_2266 inner-membrane translocator gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2921 Alide_2922 Alide_2922 Alide_2922 3025605 3026369 + ABC transporter related protein KEGG: jan:Jann_2265 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2922 Alide_2923 Alide_2923 Alide_2923 3026641 3027387 + ABC transporter related protein KEGG: jan:Jann_2264 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2923 Alide_2924 Alide_2924 Alide_2924 3027498 3029213 - Electron-transferring-flavoprotein dehydrogenase KEGG: dia:Dtpsy_1751 electron-transferring-flavoprotein dehydrogenase~PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase%3B FAD dependent oxidoreductase gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2924 Alide_2925 Alide_2925 Alide_2925 3029274 3030119 - HpcH/HpaI aldolase PFAM: HpcH/HpaI aldolase~KEGG: bur:Bcep18194_C7302 HpcH/HpaI aldolase gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2925 Alide_2926 Alide_2926 Alide_2926 3030122 3031321 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: bur:Bcep18194_C7301 L-carnitine dehydratase/bile acid-inducible protein F gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2926 Alide_2927 Alide_2927 Alide_2927 3031334 3032182 - hypothetical protein KEGG: bbr:BB0622 hypothetical protein gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2927 Alide_2928 Alide_2928 Alide_2928 3032271 3033203 - Electron transfer flavoprotein alpha subunit PFAM: Electron transfer flavoprotein alpha subunit %3B Electron transfer flavoprotein alpha/beta-subunit~KEGG: dia:Dtpsy_2298 electron transfer flavoprotein alpha subunit gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2928 Alide_2929 Alide_2929 Alide_2929 3033221 3033970 - Electron transfer flavoprotein alpha/beta-subunit PFAM: Electron transfer flavoprotein alpha/beta-subunit~KEGG: dia:Dtpsy_3012 electron transfer flavoprotein alpha/beta-subunit gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2929 Alide_2930 Alide_2930 Alide_2930 3033993 3035159 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: bur:Bcep18194_C7297 acyl-CoA dehydrogenase gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2930 Alide_2931 Alide_2931 Alide_2931 3035269 3036198 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: bur:Bcep18194_C7296 LysR family transcriptional regulator gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2931 Alide_2932 Alide_2932 Alide_2932 3036195 3037625 - MmgE/PrpD family protein PFAM: MmgE/PrpD family protein~KEGG: bur:Bcep18194_C7308 MmgE/PrpD gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2932 Alide_2933 Alide_2933 Alide_2933 3037637 3038818 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: bbr:BB0617 CaiB/BaiF family protein gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2933 Alide_2934 Alide_2934 Alide_2934 3038859 3039720 - pseudogene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2934 Alide_2935 Alide_2935 Alide_2935 3039726 3041663 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: bbr:BB0615 AMP-binding enzyme gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2935 Alide_2936 Alide_2936 Alide_2936 3041677 3042882 - acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~KEGG: bur:Bcep18194_C7332 acetyl-CoA acetyltransferase~PFAM: Thiolase-like gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2936 Alide_2937 Alide_2937 Alide_2937 3042963 3043712 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bbr:BB0613 putative short chain dehydrogenase gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2937 Alide_2938 Alide_2938 Alide_2938 3043743 3044618 - 3-alpha%2C7-alpha%2C12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase KEGG: bpa:BPP0606 putative enoyl-CoA hydratase~PFAM: MaoC domain protein dehydratase gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2938 Alide_2939 Alide_2939 Alide_2939 3044854 3046005 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: bbr:BB0611 acyl-CoA dehydrogenase gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2939 Alide_2940 Alide_2940 Alide_2940 3046045 3046914 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: bur:Bcep18194_C7313 alpha/beta hydrolase fold gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2940 Alide_2941 Alide_2941 Alide_2941 3047027 3047860 + regulatory protein IclR KEGG: bpa:BPP0603 IclR family regulatory protein~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2941 Alide_2942 Alide_2942 Alide_2942 3047857 3048651 + regulatory protein IclR KEGG: bbr:BB0608 IclR family regulatory protein~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2942 Alide_2943 Alide_2943 Alide_2943 3048695 3050131 - MmgE/PrpD family protein PFAM: MmgE/PrpD family protein~KEGG: bur:Bcep18194_C6759 MmgE/PrpD gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2943 Alide_2944 Alide_2944 Alide_2944 3050128 3050748 - hypothetical protein KEGG: bur:Bcep18194_C6760 hypothetical protein gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2944 Alide_2945 Alide_2945 Alide_2945 3050821 3051768 - hypothetical protein KEGG: vei:Veis_2943 hypothetical protein gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2945 Alide_2946 Alide_2946 Alide_2946 3052008 3053627 + glucose-methanol-choline oxidoreductase PFAM: glucose-methanol-choline oxidoreductase%3B GMC oxidoreductase~KEGG: bur:Bcep18194_C7484 glucose-methanol-choline oxidoreductase gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2946 Alide_2947 Alide_2947 Alide_2947 3053653 3055125 + Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: bur:Bcep18194_C7485 aldehyde dehydrogenase gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2947 Alide_2948 Alide_2948 Alide_2948 3055156 3056085 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: bur:Bcep18194_C7486 LysR family transcriptional regulator gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2948 Alide_2949 Alide_2949 Alide_2949 3056086 3057303 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: bur:Bcep18194_C7488 L-carnitine dehydratase/bile acid-inducible protein F gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2949 Alide_2950 Alide_2950 Alide_2950 3057309 3058322 - hypothetical protein KEGG: reu:Reut_A1831 hypothetical protein gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2950 Alide_2951 Alide_2951 Alide_2951 3058384 3059199 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: pol:Bpro_5272 short chain enoyl-CoA hydratase gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2951 Alide_2952 Alide_2952 Alide_2952 3059241 3060047 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bur:Bcep18194_C7276 short-chain dehydrogenase/reductase SDR gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2952 Alide_2953 Alide_2953 Alide_2953 3060317 3060430 + hypothetical protein gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2953 Alide_2954 Alide_2954 Alide_2954 3060576 3061718 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: reu:Reut_A1835 acyl-CoA dehydrogenase%2C C-terminal:acyl-CoA dehydrogenase%2C central region:acyl-CoA dehydrogenase%2C N-terminal gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2954 Alide_2955 Alide_2955 Alide_2955 3061733 3062233 + MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: reu:Reut_A1834 MaoC-like dehydratase gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2955 Alide_2956 Alide_2956 Alide_2956 3062239 3063597 + protein of unknown function DUF1446 PFAM: protein of unknown function DUF1446~KEGG: sth:STH1574 hypothetical protein gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2956 Alide_2957 Alide_2957 Alide_2957 3063599 3063940 + hypothetical protein KEGG: bbt:BBta_2933 hypothetical protein gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2957 Alide_2958 Alide_2958 Alide_2958 3063953 3065134 + Propanoyl-CoA C-acyltransferase KEGG: eba:ebA306 lipid-transfer protein~PFAM: Beta-ketoacyl synthase gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2958 Alide_2959 Alide_2959 Alide_2959 3065252 3066259 + hypothetical protein KEGG: reu:Reut_A1831 hypothetical protein gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2959 Alide_2960 Alide_2960 Alide_2960 3066265 3067497 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: bur:Bcep18194_C7488 L-carnitine dehydratase/bile acid-inducible protein F gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2960 Alide_2961 Alide_2961 Alide_2961 3067545 3068702 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: reu:Reut_A1830 L-carnitine dehydratase/bile acid-inducible protein F gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2961 Alide_2962 Alide_2962 Alide_2962 3068727 3068885 + hypothetical protein KEGG: dac:Daci_0790 hypothetical protein gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2962 Alide_2963 Alide_2963 Alide_2963 3069212 3069688 + hypothetical protein KEGG: jan:Jann_3827 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2963 Alide_2964 Alide_2964 Alide_2964 3069734 3070891 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: bur:Bcep18194_C7493 alpha-methylacyl-CoA racemase gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2964 Alide_2965 Alide_2965 Alide_2965 3070954 3071049 - pseudogene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2965 Alide_2966 Alide_2966 Alide_2966 3071052 3072020 - hypothetical protein KEGG: bbr:BB0605 hypothetical protein gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2966 Alide_2967 Alide_2967 Alide_2967 3072187 3073143 - regulatory protein LysR PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: bur:Bcep18194_B2640 LysR family transcriptional regulator gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2967 Alide_2968 Alide_2968 Alide_2968 3073232 3074653 + MmgE/PrpD family protein PFAM: MmgE/PrpD family protein~KEGG: bur:Bcep18194_B2639 hypothetical protein gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2968 Alide_2969 Alide_2969 Alide_2969 3074818 3075600 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bbr:BB0604 short chain dehydrogenase gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2969 Alide_2970 Alide_2970 Alide_2970 3075597 3077567 + NADH:flavin oxidoreductase/NADH oxidase PFAM: NADH:flavin oxidoreductase/NADH oxidase%3B alanine dehydrogenase/PNT domain protein~KEGG: bbr:BB0603 NADH:flavin oxidoreductase / NADH oxidase family protein gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2970 Alide_2971 Alide_2971 Alide_2971 3077582 3078301 - ABC transporter related protein KEGG: bbr:BB0602 ABC transport system ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2971 Alide_2972 Alide_2972 Alide_2972 3078291 3079040 - ABC transporter related protein KEGG: bbr:BB0601 ABC transport system ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2972 Alide_2973 Alide_2973 Alide_2973 3079043 3079960 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: bbr:BB0600 putative branched-chain amino acid transport system permease protein gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2973 Alide_2974 Alide_2974 Alide_2974 3079953 3080828 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: bbr:BB0599 putative branched-chain amino acid transport system permease protein gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2974 Alide_2975 Alide_2975 Alide_2975 3081007 3082182 - Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: bbr:BB0598 extracellular ligand binding protein gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2975 Alide_2976 Alide_2976 Alide_2976 3082377 3083147 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: bbr:BB0597 enoyl-CoA hydratase/isomerase family protein gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2976 Alide_2977 Alide_2977 Alide_2977 3083152 3083835 - nitroreductase PFAM: nitroreductase~KEGG: bbr:BB0596 nitroreductase family protein gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2977 Alide_2978 Alide_2978 Alide_2978 3083839 3084261 - hypothetical protein KEGG: bbr:BB0595 hypothetical protein gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2978 Alide_2979 Alide_2979 Alide_2979 3084258 3085223 - hypothetical protein KEGG: bbr:BB0594 hypothetical protein gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2979 Alide_2980 Alide_2980 Alide_2980 3085236 3086396 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: bbr:BB0593 CaiB/BaiF family protein gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2980 Alide_2981 Alide_2981 Alide_2981 3086398 3087642 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: bur:Bcep18194_B2644 L-carnitine dehydratase/bile acid-inducible protein F gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2981 Alide_2982 Alide_2982 Alide_2982 3087719 3088885 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: bur:Bcep18194_C7290 acyl-CoA dehydrogenase gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2982 Alide_2983 Alide_2983 Alide_2983 3088897 3089358 - MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: bur:Bcep18194_C7289 MaoC-like dehydratase gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2983 Alide_2984 Alide_2984 Alide_2984 3089386 3090270 - Citryl-CoA lyase KEGG: bbr:BB0589 hypothetical protein~PFAM: HpcH/HpaI aldolase gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2984 Alide_2985 Alide_2985 Alide_2985 3090475 3091092 - regulatory protein TetR PFAM: regulatory protein TetR~KEGG: dac:Daci_4464 TetR family transcriptional regulator gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2985 Alide_2986 Alide_2986 Alide_2986 3091563 3093983 - ATP-dependent protease La SMART: peptidase S16 lon domain protein%3B AAA ATPase~TIGRFAM: ATP-dependent protease La~KEGG: dia:Dtpsy_1130 ATP-dependent protease La~PFAM: peptidase S16 lon domain protein%3B AAA ATPase central domain protein gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2986 Alide_2987 Alide_2987 Alide_2987 3094122 3095387 - ATP-dependent Clp protease%2C ATP-binding subunit ClpX TIGRFAM: ATP-dependent Clp protease%2C ATP-binding subunit ClpX~PFAM: ATPase AAA-2 domain protein%3B Clp ATPase-like~KEGG: dia:Dtpsy_1129 ATP-dependent protease ATP-binding subunit ClpX~SMART: AAA ATPase gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2987 Alide_2988 Alide_2988 Alide_2988 3095487 3096095 - ATP-dependent Clp protease%2C proteolytic subunit ClpP TIGRFAM: ATP-dependent Clp protease%2C proteolytic subunit ClpP~KEGG: dia:Dtpsy_1128 ATP-dependent Clp protease proteolytic subunit~PFAM: peptidase S14 ClpP gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2988 Alide_2989 Alide_2989 Alide_2989 3096220 3097530 - trigger factor KEGG: dia:Dtpsy_1127 trigger factor~TIGRFAM: trigger factor~PFAM: trigger factor domain-containing protein%3B peptidylprolyl isomerase FKBP-type gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2989 Alide_2990 Alide_2990 Alide_2990 3097754 3100873 - acriflavin resistance protein PFAM: acriflavin resistance protein~KEGG: ajs:Ajs_1207 acriflavin resistance protein gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2990 Alide_2991 Alide_2991 Alide_2991 3100883 3102154 - efflux transporter%2C RND family%2C MFP subunit KEGG: dia:Dtpsy_1125 efflux transporter%2C RND family%2C MFP subunit~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2991 Alide_2992 Alide_2992 Alide_2992 3102247 3103125 + squalene synthase HpnC KEGG: dia:Dtpsy_1124 squalene synthase HpnC~TIGRFAM: squalene synthase HpnC~PFAM: Squalene/phytoene synthase gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2992 Alide_2993 Alide_2993 Alide_2993 3103239 3104078 + squalene synthase HpnD TIGRFAM: squalene synthase HpnD~KEGG: dia:Dtpsy_1121 squalene synthase HpnD~PFAM: Squalene/phytoene synthase gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2993 Alide_2994 Alide_2994 Alide_2994 3104110 3105744 - chemotaxis sensory transducer KEGG: rfr:Rfer_3023 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein gene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2994 Alide_2995 Alide_2995 Alide_2995 3105927 3107219 + squalene-associated FAD-dependent desaturase KEGG: ajs:Ajs_1201 amine oxidase~TIGRFAM: squalene-associated FAD-dependent desaturase~PFAM: amine oxidase gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2995 Alide_2996 Alide_2996 Alide_2996 3107233 3109257 + hypothetical protein KEGG: pna:Pnap_2063 hypothetical protein gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2996 Alide_2997 Alide_2997 Alide_2997 3109459 3110712 - ribonuclease BN KEGG: dia:Dtpsy_1119 ribonuclease BN~TIGRFAM: ribonuclease BN~PFAM: ribonuclease BN gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2997 Alide_2998 Alide_2998 Alide_2998 3110734 3111162 + Protein of unknown function DUF2069%2C membrane PFAM: Protein of unknown function DUF2069%2C membrane~KEGG: dia:Dtpsy_1118 membrane protein-like protein gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2998 Alide_2999 Alide_2999 Alide_2999 3111159 3112583 + FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: dia:Dtpsy_1117 FAD linked oxidase domain protein gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_2999 Alide_3000 Alide_3000 Alide_3000 3112636 3113451 + thymidylate synthase TIGRFAM: thymidylate synthase~KEGG: ajs:Ajs_1197 thymidylate synthase~PFAM: thymidylate synthase gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3000 Alide_3001 Alide_3001 Alide_3001 3113448 3113945 + Dihydrofolate reductase KEGG: dia:Dtpsy_1115 dihydrofolate reductase~PFAM: dihydrofolate reductase region gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3001 Alide_3002 Alide_3002 Alide_3002 3113911 3114441 - hypothetical protein KEGG: vap:Vapar_3238 hypothetical protein gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3002 Alide_3003 Alide_3003 Alide_3003 3114476 3115129 - OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: vap:Vapar_3239 hypothetical protein gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3003 Alide_3004 Alide_3004 Alide_3004 3115126 3117213 - protein of unknown function DUF802 PFAM: protein of unknown function DUF802~KEGG: vap:Vapar_3240 protein of unknown function DUF802 gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3004 Alide_3005 Alide_3005 Alide_3005 3117210 3117881 - hypothetical protein KEGG: vap:Vapar_3241 hypothetical protein gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3005 Alide_3006 Alide_3006 Alide_3006 3118069 3118455 - transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: nwi:Nwi_1015 transposase%2C IS4 gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3006 Alide_3007 Alide_3007 Alide_3007 3118452 3118829 - putative transposase-related protein KEGG: rle:pRL110581 putative transposase-related protein gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3007 Alide_3008 Alide_3008 Alide_3008 3118906 3119616 - response regulator receiver KEGG: tgr:Tgr7_1884 response regulator receiver protein~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3008 Alide_3009 Alide_3009 Alide_3009 3119621 3122350 - Osmosensitive K channel His kinase sensor KEGG: tgr:Tgr7_1885 sensor protein KdpD~PFAM: Osmosensitive K channel His kinase sensor%3B UspA domain-containing protein%3B histidine kinase A domain protein%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3009 Alide_3010 Alide_3010 Alide_3010 3122366 3122998 - potassium-transporting ATPase%2C C subunit TIGRFAM: potassium-transporting ATPase%2C C subunit~KEGG: pap:PSPA7_3714 K+-transporting ATPase subunit C~PFAM: K transporting ATPase KdpC subunit gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3010 Alide_3011 Alide_3011 Alide_3011 3123012 3125036 - K+-transporting ATPase%2C B subunit KEGG: tgr:Tgr7_1888 potassium-transporting ATPase subunit B~TIGRFAM: K+-transporting ATPase%2C B subunit%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B Haloacid dehalogenase domain protein hydrolase gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3011 Alide_3012 Alide_3012 Alide_3012 3125048 3126748 - potassium-transporting ATPase%2C A subunit TIGRFAM: potassium-transporting ATPase%2C A subunit~KEGG: pap:PSPA7_3712 potassium-transporting ATPase subunit A~PFAM: K transporting ATPase A subunit gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3012 Alide_3013 Alide_3013 Alide_3013 3126961 3127251 + hypothetical protein KEGG: shn:Shewana3_1258 XRE family transcriptional regulator gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3013 Alide_3014 Alide_3014 Alide_3014 3127258 3128034 + exodeoxyribonuclease III Xth KEGG: dia:Dtpsy_1114 exodeoxyribonuclease III Xth~TIGRFAM: exodeoxyribonuclease III Xth%3B exodeoxyribonuclease III~PFAM: Endonuclease/exonuclease/phosphatase gene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3014 Alide_3015 Alide_3015 Alide_3015 3128358 3129797 - nitrogen regulation protein NR(I) TIGRFAM: nitrogen regulation protein NR(I)~PFAM: sigma-54 factor interaction domain-containing protein%3B response regulator receiver%3B helix-turn-helix Fis-type~KEGG: dia:Dtpsy_1112 nitrogen metabolism transcriptional regulator%2C NtrC%2C fis family~SMART: response regulator receiver%3B AAA ATPase gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3015 Alide_3016 Alide_3016 Alide_3016 3129839 3130909 - ATP-binding region ATPase domain protein manually curated~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~KEGG: dia:Dtpsy_1111 signal transduction histidine kinase%2C nitrogen specific%2C NtrB~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3016 Alide_3017 Alide_3017 Alide_3017 3130934 3131422 - conserved hypothetical protein KEGG: dia:Dtpsy_1110 putative signal peptide protein gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3017 Alide_3018 Alide_3018 Alide_3018 3131596 3133011 - glutamine synthetase%2C type I KEGG: aav:Aave_1442 L-glutamine synthetase~TIGRFAM: glutamine synthetase%2C type I~PFAM: glutamine synthetase catalytic region%3B glutamine synthetase beta-Grasp gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3018 Alide_3019 Alide_3019 Alide_3019 3133183 3134004 - molybdopterin binding domain protein PFAM: molybdopterin binding domain~KEGG: ajs:Ajs_1188 molybdopterin binding domain-containing protein gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3019 Alide_3020 Alide_3020 Alide_3020 3134001 3134894 - putative transmembrane protein KEGG: dia:Dtpsy_1107 putative transmembrane protein gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3020 Alide_3021 Alide_3021 Alide_3021 3134922 3135947 - fatty acid hydroxylase PFAM: fatty acid hydroxylase~KEGG: dia:Dtpsy_1106 fatty acid hydroxylase gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3021 Alide_3022 Alide_3022 Alide_3022 3135962 3136765 - polysaccharide deacetylase KEGG: dia:Dtpsy_1105 polysaccharide deacetylase~manually curated~PFAM: polysaccharide deacetylase gene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3022 Alide_3023 Alide_3023 Alide_3023 3136779 3137744 - hypothetical protein KEGG: dia:Dtpsy_1104 hypothetical protein gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3023 Alide_3024 Alide_3024 Alide_3024 3137852 3138589 - pseudouridine synthase PFAM: pseudouridine synthase~KEGG: ajs:Ajs_1183 ribosomal small subunit pseudouridine synthase A gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3024 Alide_3025 Alide_3025 Alide_3025 3144441 3144965 - phosphoribosyltransferase PFAM: phosphoribosyltransferase~KEGG: ajs:Ajs_1182 phosphoribosyltransferase gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3025 Alide_3026 Alide_3026 Alide_3026 3145037 3146413 - adenylosuccinate synthetase SMART: adenylosuccinate synthetase~TIGRFAM: adenylosuccinate synthetase~KEGG: dia:Dtpsy_1101 adenylosuccinate synthetase~PFAM: adenylosuccinate synthetase gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3026 Alide_3027 Alide_3027 Alide_3027 3146441 3147589 - histidyl-tRNA synthetase 2 KEGG: ajs:Ajs_1180 tRNA synthetase%2C class II (G%2C H%2C P and S)~TIGRFAM: histidyl-tRNA synthetase 2~PFAM: tRNA synthetase class II (G H P and S) gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3027 Alide_3028 Alide_3028 Alide_3028 3147664 3147852 - Protein of unknown function DUF2065 PFAM: Protein of unknown function DUF2065~KEGG: ajs:Ajs_1179 hypothetical protein gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3028 Alide_3029 Alide_3029 Alide_3029 3147881 3148795 - HflC protein TIGRFAM: HflC protein~PFAM: band 7 protein~KEGG: ajs:Ajs_1178 HflC protein~SMART: band 7 protein gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3029 Alide_3030 Alide_3030 Alide_3030 3148805 3150181 - HflK protein TIGRFAM: HflK protein~PFAM: band 7 protein~KEGG: dia:Dtpsy_1097 HflK protein~SMART: band 7 protein gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3030 Alide_3031 Alide_3031 Alide_3031 3150234 3151412 - GTP-binding proten HflX KEGG: ajs:Ajs_1176 small GTP-binding protein~TIGRFAM: GTP-binding proten HflX~PFAM: GTP-binding protein HSR1-related gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3031 Alide_3032 Alide_3032 Alide_3032 3151477 3151779 - RNA chaperone Hfq KEGG: dia:Dtpsy_1095 RNA chaperone Hfq~TIGRFAM: RNA chaperone Hfq~PFAM: Like-Sm ribonucleoprotein core gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3032 Alide_3033 Alide_3033 Alide_3033 3151803 3153146 - ribosome-associated GTPase EngA KEGG: dia:Dtpsy_1094 GTP-binding protein EngA~TIGRFAM: ribosome-associated GTPase EngA%3B small GTP-binding protein~PFAM: GTP-binding protein HSR1-related gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3033 Alide_3034 Alide_3034 Alide_3034 3153165 3154313 - outer membrane assembly lipoprotein YfgL KEGG: dia:Dtpsy_1093 outer membrane assembly lipoprotein YfgL~TIGRFAM: outer membrane assembly lipoprotein YfgL~PFAM: Pyrrolo-quinoline quinone repeat-containing protein gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3034 Alide_3035 Alide_3035 Alide_3035 3154310 3154990 - Protein of unknown function DUF2133 PFAM: Protein of unknown function DUF2133~KEGG: dia:Dtpsy_1092 hypothetical protein gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3035 Alide_3036 Alide_3036 Alide_3036 3155006 3156295 - histidyl-tRNA synthetase TIGRFAM: histidyl-tRNA synthetase~KEGG: dia:Dtpsy_1091 histidyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Anticodon-binding domain protein gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3036 Alide_3037 Alide_3037 Alide_3037 3156378 3157652 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase KEGG: dia:Dtpsy_1090 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase~TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase~PFAM: IspG family protein gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3037 Alide_3038 Alide_3038 Alide_3038 3157653 3158549 - hypothetical protein KEGG: dia:Dtpsy_1089 hypothetical protein gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3038 Alide_3039 Alide_3039 Alide_3039 3158542 3159369 - type IV pilus biogenesis/stability protein PilW KEGG: dia:Dtpsy_1088 type IV pilus biogenesis/stability protein PilW~TIGRFAM: type IV pilus biogenesis/stability protein PilW~PFAM: Tetratricopeptide TPR_1 repeat-containing protein gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3039 Alide_3040 Alide_3040 Alide_3040 3159391 3160515 - radical SAM enzyme%2C Cfr family KEGG: dia:Dtpsy_1087 radical SAM enzyme%2C Cfr family~TIGRFAM: radical SAM enzyme%2C Cfr family~PFAM: Radical SAM domain protein gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3040 Alide_3041 Alide_3041 Alide_3041 3160603 3161028 - Nucleoside-diphosphate kinase PFAM: nucleoside diphosphate kinase~KEGG: ajs:Ajs_1166 nucleoside diphosphate kinase~SMART: nucleoside diphosphate kinase gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3041 Alide_3042 Alide_3042 Alide_3042 3161107 3162462 - pseudouridine synthase KEGG: dia:Dtpsy_1085 pseudouridine synthase~PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3042 Alide_3043 Alide_3043 Alide_3043 3162464 3163132 - segregation and condensation protein B KEGG: dia:Dtpsy_1084 chromosome segregation and condensation protein%2C ScpB~TIGRFAM: segregation and condensation protein B~PFAM: chromosome segregation and condensation protein ScpB gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3043 Alide_3044 Alide_3044 Alide_3044 3163301 3164299 - pseudouridine synthase%2C RluA family TIGRFAM: pseudouridine synthase%2C RluA family~PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein~KEGG: dia:Dtpsy_1083 pseudouridine synthase%2C RluA family~SMART: RNA-binding S4 domain protein gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3044 Alide_3045 Alide_3045 Alide_3045 3164308 3165210 - Peptidase M23 KEGG: dia:Dtpsy_1082 peptidase M23~PFAM: Peptidase M23%3B Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding LysM gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3045 Alide_3046 Alide_3046 Alide_3046 3165222 3165995 - protein-L-isoaspartate O-methyltransferase TIGRFAM: protein-L-isoaspartate O-methyltransferase~KEGG: dia:Dtpsy_1081 protein-L-isoaspartate O-methyltransferase~PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3046 Alide_3047 Alide_3047 Alide_3047 3165995 3166816 - stationary-phase survival protein SurE KEGG: ajs:Ajs_1160 stationary phase survival protein SurE~TIGRFAM: stationary-phase survival protein SurE~PFAM: Survival protein SurE gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3047 Alide_3048 Alide_3048 Alide_3048 3166882 3168462 + diguanylate cyclase SMART: GGDEF domain containing protein~TIGRFAM: diguanylate cyclase~KEGG: dia:Dtpsy_1078 diguanylate cyclase~PFAM: GGDEF domain containing protein gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3048 Alide_3049 Alide_3049 Alide_3049 3168489 3170069 + Alkaline phosphatase KEGG: dia:Dtpsy_1077 alkaline phosphatase gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3049 Alide_3050 Alide_3050 Alide_3050 3170106 3171020 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dac:Daci_0788 LysR family transcriptional regulator gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3050 Alide_3051 Alide_3051 Alide_3051 3171133 3172329 + FMN-dependent alpha-hydroxy acid dehydrogenase PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase~KEGG: dac:Daci_0789 FMN-dependent alpha-hydroxy acid dehydrogenase gene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3051 Alide_3052 Alide_3052 Alide_3052 3172368 3173354 + hypothetical protein KEGG: dac:Daci_5118 hypothetical protein gene gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3052 Alide_3053 Alide_3053 Alide_3053 3173404 3174138 - pseudogene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3053 Alide_3054 Alide_3054 Alide_3054 3174179 3175114 - pseudogene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3054 Alide_3055 Alide_3055 Alide_3055 3175196 3176032 - Ureidoglycolate lyase KEGG: bja:bll6360 putative bifunctional enzyme 2-hydroxyhepta-2%2C4-diene-1%2C7-dioatesomerase 5-carboxymethyl-2-oxo-hex-3-ene-1%2C7-dioatedecarboxylase protein~PFAM: fumarylacetoacetate (FAA) hydrolase gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3055 Alide_3056 Alide_3056 Alide_3056 3176150 3176824 + regulatory protein TetR PFAM: regulatory protein TetR~KEGG: bph:Bphy_3516 TetR family transcriptional regulator gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3056 Alide_3057 Alide_3057 Alide_3057 3177147 3179759 + DNA mismatch repair protein MutS SMART: DNA mismatch repair protein MutS domain protein%3B MutS III domain protein~manually curated~KEGG: dia:Dtpsy_1076 DNA mismatch repair protein MutS~TIGRFAM: DNA mismatch repair protein MutS~PFAM: DNA mismatch repair protein MutS domain protein%3B MutS II domain protein%3B MutS III domain protein%3B MutS IV domain protein gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3057 Alide_3058 Alide_3058 Alide_3058 3179772 3181184 - RND efflux system%2C outer membrane lipoprotein%2C NodT family KEGG: dac:Daci_2259 RND efflux system outer membrane lipoprotein~TIGRFAM: RND efflux system%2C outer membrane lipoprotein%2C NodT family~PFAM: outer membrane efflux protein gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3058 Alide_3059 Alide_3059 Alide_3059 3181187 3184312 - acriflavin resistance protein PFAM: acriflavin resistance protein~KEGG: dac:Daci_2258 acriflavin resistance protein gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3059 Alide_3060 Alide_3060 Alide_3060 3184433 3187549 - acriflavin resistance protein PFAM: acriflavin resistance protein~KEGG: dac:Daci_2257 acriflavin resistance protein gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3060 Alide_3061 Alide_3061 Alide_3061 3187586 3189010 - efflux transporter%2C RND family%2C MFP subunit KEGG: dac:Daci_2256 RND family efflux transporter MFP subunit~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein%3B protein of unknown function Spy-related gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3061 Alide_3062 Alide_3062 Alide_3062 3189322 3190134 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: dia:Dtpsy_1074 alpha/beta hydrolase fold protein gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3062 Alide_3063 Alide_3063 Alide_3063 3190150 3190974 - undecaprenol kinase KEGG: ajs:Ajs_1152 undecaprenyl pyrophosphate phosphatase~TIGRFAM: undecaprenol kinase~PFAM: Bacitracin resistance protein BacA gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3063 Alide_3064 Alide_3064 Alide_3064 3191161 3191712 + hypothetical protein KEGG: vap:Vapar_3609 hypothetical protein gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3064 Alide_3065 Alide_3065 Alide_3065 3191724 3192095 + hypothetical protein KEGG: vei:Veis_2284 hypothetical protein gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3065 Alide_3066 Alide_3066 Alide_3066 3192105 3193160 + histidine kinase internal region protein PFAM: histidine kinase internal region%3B ATP-binding region ATPase domain protein~KEGG: vei:Veis_2283 signal transduction histidine kinase%2C LytS gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3066 Alide_3067 Alide_3067 Alide_3067 3193129 3193935 + LytTr DNA-binding region protein KEGG: dia:Dtpsy_1069 two component transcriptional regulator%2C LytTR family~PFAM: LytTr DNA-binding region%3B response regulator receiver~SMART: response regulator receiver gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3067 Alide_3068 Alide_3068 Alide_3068 3194112 3195317 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: bpe:BP2600 hypothetical protein gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3068 Alide_3069 Alide_3069 Alide_3069 3195343 3196581 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: dia:Dtpsy_1068 major facilitator superfamily MFS_1 gene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3069 Alide_3070 Alide_3070 Alide_3070 3196633 3197853 - FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: ajs:Ajs_1146 monooxygenase%2C FAD-binding gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3070 Alide_3071 Alide_3071 Alide_3071 3197876 3200782 - aconitate hydratase 1 KEGG: ajs:Ajs_1145 aconitate hydratase~TIGRFAM: aconitate hydratase 1~PFAM: aconitate hydratase domain-containing protein gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3071 Alide_3072 Alide_3072 Alide_3072 3201055 3201351 - histone family protein nucleoid-structuring protein H-NS KEGG: dia:Dtpsy_1065 histone family protein nucleoid-structuring protein H-NS~PFAM: histone family protein nucleoid-structuring protein H-NS~SMART: histone family protein nucleoid-structuring protein H-NS gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3072 Alide_3073 Alide_3073 Alide_3073 3201667 3202512 + bis(5'-nucleosyl)-tetraphosphatase (symmetrical) TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical)~KEGG: dia:Dtpsy_1064 diadenosine tetraphosphatase~PFAM: metallophosphoesterase gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3073 Alide_3074 Alide_3074 Alide_3074 3202614 3203654 - ApbE family lipoprotein PFAM: ApbE family lipoprotein~KEGG: dia:Dtpsy_1063 ApbE family lipoprotein gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3074 Alide_3075 Alide_3075 Alide_3075 3203674 3204087 - cytochrome c class I PFAM: cytochrome c class I~KEGG: dia:Dtpsy_1062 cytochrome c class I gene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3075 Alide_3076 Alide_3076 Alide_3076 3204315 3204674 + hypothetical protein KEGG: dia:Dtpsy_1061 hypothetical protein gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3076 Alide_3077 Alide_3077 Alide_3077 3204696 3206630 + Nitrous-oxide reductase KEGG: ajs:Ajs_1139 nitrous-oxide reductase~PFAM: cytochrome c oxidase subunit II gene gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3077 Alide_3078 Alide_3078 Alide_3078 3206694 3209315 + FMN-binding domain protein PFAM: FMN-binding domain protein~KEGG: dia:Dtpsy_1059 FMN-binding domain protein gene gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3078 Alide_3079 Alide_3079 Alide_3079 3209312 3210580 + periplasmic copper-binding protein KEGG: dia:Dtpsy_1058 periplasmic copper-binding~PFAM: periplasmic copper-binding~SMART: Carbohydrate-binding and sugar hydrolysis%3B Parallel beta-helix repeat gene gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3079 Alide_3080 Alide_3080 Alide_3080 3210555 3211487 + ABC transporter related protein KEGG: dia:Dtpsy_1057 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3080 Alide_3081 Alide_3081 Alide_3081 3211503 3212318 + ABC-2 type transporter KEGG: dia:Dtpsy_1056 ABC-2 type transporter gene gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3081 Alide_3082 Alide_3082 Alide_3082 3212315 3212851 + NosL family protein KEGG: dia:Dtpsy_1055 NosL family protein gene gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3082 Alide_3083 Alide_3083 Alide_3083 3212912 3213511 + hypothetical protein KEGG: dia:Dtpsy_1054 hypothetical protein gene gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3083 Alide_3084 Alide_3084 Alide_3084 3213612 3215054 - DEAD/DEAH box helicase domain protein KEGG: dia:Dtpsy_1053 DEAD/DEAH box helicase domain protein~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein gene gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3084 Alide_3085 Alide_3085 Alide_3085 3215143 3216006 - protein of unknown function zinc metallopeptidase PFAM: protein of unknown function zinc metallopeptidase~KEGG: dia:Dtpsy_1052 protein of unknown function zinc metallopeptidase putative gene gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3085 Alide_3086 Alide_3086 Alide_3086 3216071 3216637 - deoxycytidine triphosphate deaminase TIGRFAM: deoxycytidine triphosphate deaminase~KEGG: dia:Dtpsy_1050 deoxycytidine triphosphate deaminase gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3086 Alide_3087 Alide_3087 Alide_3087 3216755 3217972 - protein of unknown function DUF989 PFAM: protein of unknown function DUF989~KEGG: ajs:Ajs_1128 hypothetical protein gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3087 Alide_3088 Alide_3088 Alide_3088 3218254 3219087 - xanthine dehydrogenase accessory protein XdhC TIGRFAM: xanthine dehydrogenase accessory protein XdhC~KEGG: ajs:Ajs_1125 hypothetical protein gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3088 Alide_3089 Alide_3089 Alide_3089 3219150 3219677 + hypothetical protein KEGG: dia:Dtpsy_1044 hypothetical protein gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3089 Alide_3090 Alide_3090 Alide_3090 3219836 3220186 - hydroxyisourate hydrolase TIGRFAM: hydroxyisourate hydrolase~KEGG: dia:Dtpsy_1043 hydroxyisourate hydrolase~PFAM: Transthyretin gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3090 Alide_3091 Alide_3091 Alide_3091 3220329 3222119 + gamma-glutamyltransferase TIGRFAM: gamma-glutamyltransferase~KEGG: dac:Daci_2120 gamma-glutamyltransferase~PFAM: gamma-glutamyltranspeptidase gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3091 Alide_3092 Alide_3092 Alide_3092 3222116 3222661 - hypothetical protein KEGG: dac:Daci_0940 hypothetical protein gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3092 Alide_3093 Alide_3093 Alide_3093 3222799 3223101 - pseudogene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3093 Alide_3094 Alide_3094 Alide_3094 3223154 3224068 - 2-hydroxy-3-oxopropionate reductase TIGRFAM: 2-hydroxy-3-oxopropionate reductase~KEGG: dac:Daci_2119 2-hydroxy-3-oxopropionate reductase~PFAM: 6-phosphogluconate dehydrogenase NAD-binding gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3094 Alide_3095 Alide_3095 Alide_3095 3224116 3224916 - hydroxypyruvate isomerase TIGRFAM: hydroxypyruvate isomerase~KEGG: ctt:CtCNB1_3709 xylose isomerase-like TIM barrel~PFAM: Xylose isomerase domain-containing protein TIM barrel gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3095 Alide_3096 Alide_3096 Alide_3096 3224946 3226736 - glyoxylate carboligase KEGG: dac:Daci_2117 glyoxylate carboligase~TIGRFAM: glyoxylate carboligase~PFAM: thiamine pyrophosphate TPP-binding domain-containing protein%3B thiamine pyrophosphate central domain-containing protein gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3096 Alide_3097 Alide_3097 Alide_3097 3226847 3227776 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dac:Daci_2116 LysR family transcriptional regulator gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3097 Alide_3098 Alide_3098 Alide_3098 3227855 3228745 - extracellular solute-binding protein family 3 KEGG: lch:Lcho_4024 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3 gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3098 Alide_3099 Alide_3099 Alide_3099 3228797 3230125 - aminotransferase class-III PFAM: aminotransferase class-III~KEGG: bur:Bcep18194_B0665 aminotransferase gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3099 Alide_3100 Alide_3100 Alide_3100 3230323 3231216 + regulatory protein LysR PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: tmz:Tmz1t_1334 transcriptional regulator%2C LysR family gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3100 Alide_3101 Alide_3101 Alide_3101 3231244 3232566 - Hydroxypyruvate reductase KEGG: ajs:Ajs_1122 hydroxypyruvate reductase~PFAM: MOFRL domain protein gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3101 Alide_3102 Alide_3102 Alide_3102 3232645 3233628 - hypothetical protein KEGG: dia:Dtpsy_1041 hypothetical protein gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3102 Alide_3103 Alide_3103 Alide_3103 3233663 3234730 - tartrate dehydrogenase TIGRFAM: tartrate dehydrogenase~KEGG: ajs:Ajs_1120 tartrate dehydrogenase~PFAM: isocitrate/isopropylmalate dehydrogenase gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3103 Alide_3104 Alide_3104 Alide_3104 3234857 3235771 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dia:Dtpsy_1039 transcriptional regulator%2C LysR family gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3104 Alide_3105 Alide_3105 Alide_3105 3235826 3236503 + GntR domain protein KEGG: dia:Dtpsy_1038 transcriptional regulator%2C GntR family~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3105 Alide_3106 Alide_3106 Alide_3106 3236500 3237459 + urate catabolism protein TIGRFAM: urate catabolism protein~KEGG: dia:Dtpsy_1037 urate catabolism protein~PFAM: polysaccharide deacetylase gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3106 Alide_3107 Alide_3107 Alide_3107 3237524 3239299 + amidase%2C hydantoinase/carbamoylase family TIGRFAM: amidase%2C hydantoinase/carbamoylase family%3B OHCU decarboxylase~KEGG: ajs:Ajs_1115 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase~PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase%3B peptidase M20%3B peptidase dimerisation domain protein gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3107 Alide_3108 Alide_3108 Alide_3108 3239296 3240549 + peptidase dimerization domain protein PFAM: peptidase dimerisation domain protein%3B peptidase M20~KEGG: dia:Dtpsy_1035 peptidase dimerisation domain protein gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3108 Alide_3109 Alide_3109 Alide_3109 3240611 3241237 - pseudogene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3109 Alide_3110 Alide_3110 Alide_3110 3241738 3243213 - chemotaxis sensory transducer KEGG: dia:Dtpsy_2395 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer~SMART: chemotaxis sensory transducer gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3110 Alide_3111 Alide_3111 Alide_3111 3243564 3245051 + xanthine permease KEGG: dac:Daci_2107 xanthine permease~TIGRFAM: xanthine permease%3B uracil-xanthine permease~PFAM: Xanthine/uracil/vitamin C permease gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3111 Alide_3112 Alide_3112 Alide_3112 3245189 3247498 + malic protein NAD-binding protein PFAM: malic protein NAD-binding%3B malic protein domain protein%3B phosphate acetyl/butaryl transferase~KEGG: ajs:Ajs_1112 malic enzyme gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3112 Alide_3113 Alide_3113 Alide_3113 3247568 3248143 - YceI family protein PFAM: YceI family protein~KEGG: dia:Dtpsy_1028 YceI family protein gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3113 Alide_3114 Alide_3114 Alide_3114 3248198 3248818 - YceI family protein PFAM: YceI family protein~KEGG: dia:Dtpsy_1027 YceI family protein gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3114 Alide_3115 Alide_3115 Alide_3115 3248815 3249402 - cytochrome b561 KEGG: dia:Dtpsy_1026 cytochrome b561 gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3115 Alide_3116 Alide_3116 Alide_3116 3249660 3250349 + hypothetical protein KEGG: ajs:Ajs_1106 hypothetical protein gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3116 Alide_3117 Alide_3117 Alide_3117 3250527 3251015 + alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~KEGG: dia:Dtpsy_2562 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3117 Alide_3118 Alide_3118 Alide_3118 3251172 3252911 + PhoH family protein KEGG: dia:Dtpsy_2563 PhoH family protein~PFAM: PhoH family protein~SMART: Nucleotide binding protein PINc gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3118 Alide_3119 Alide_3119 Alide_3119 3252983 3254515 - Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: bpd:BURPS668_A2080 putative piperideine-6-carboxylate dehydrogenase gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3119 Alide_3120 Alide_3120 Alide_3120 3254586 3256064 - replicative DNA helicase TIGRFAM: replicative DNA helicase~PFAM: DnaB domain protein helicase domain protein~KEGG: dia:Dtpsy_2565 replicative DNA helicase~SMART: AAA ATPase gene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3120 Alide_3121 Alide_3121 Alide_3121 3256186 3256638 - ribosomal protein L9 KEGG: dia:Dtpsy_2566 50S ribosomal protein L9~TIGRFAM: ribosomal protein L9~PFAM: Ribosomal protein L9-like gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3121 Alide_3122 Alide_3122 Alide_3122 3256653 3256934 - ribosomal protein S18 KEGG: aav:Aave_1230 30S ribosomal protein S18~TIGRFAM: ribosomal protein S18~PFAM: ribosomal protein S18 gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3122 Alide_3123 Alide_3123 Alide_3123 3256953 3257243 - single-strand binding protein/Primosomal replication protein n PFAM: single-strand binding protein/Primosomal replication protein n~KEGG: dia:Dtpsy_2568 putative primosomal replication protein gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3123 Alide_3124 Alide_3124 Alide_3124 3257266 3257640 - ribosomal protein S6 KEGG: dia:Dtpsy_2569 30S ribosomal protein S6~TIGRFAM: ribosomal protein S6~PFAM: Ribosomal protein S6%2C bacterial-like gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3124 Alide_3125 Alide_3125 Alide_3125 3257876 3258418 + GrpE protein PFAM: GrpE protein~KEGG: dia:Dtpsy_2570 heat shock protein GrpE gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3125 Alide_3126 Alide_3126 Alide_3126 3258511 3260454 + chaperone protein DnaK KEGG: dia:Dtpsy_2571 molecular chaperone DnaK~TIGRFAM: chaperone protein DnaK~PFAM: Heat shock protein 70 gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3126 Alide_3127 Alide_3127 Alide_3127 3260550 3261683 + chaperone protein DnaJ TIGRFAM: chaperone protein DnaJ~PFAM: chaperone DnaJ domain protein%3B DnaJ central domain protein%3B heat shock protein DnaJ domain protein~KEGG: dia:Dtpsy_2572 chaperone protein DnaJ~SMART: heat shock protein DnaJ domain protein gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3127 Alide_3128 Alide_3128 Alide_3128 3261898 3262563 + protein of unknown function DUF1555 PFAM: protein of unknown function DUF1555~KEGG: maq:Maqu_1010 hypothetical protein gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3128 Alide_3129 Alide_3129 Alide_3129 3262636 3264006 - Tryptophanase KEGG: rfr:Rfer_2475 tryptophanase~PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3129 Alide_3130 Alide_3130 Alide_3130 3264205 3265326 + peptidase U32 PFAM: peptidase U32~KEGG: ajs:Ajs_3220 peptidase U32 gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3130 Alide_3131 Alide_3131 Alide_3131 3265332 3266255 + peptidase U32 PFAM: peptidase U32~KEGG: ajs:Ajs_3221 peptidase U32 gene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3131 Alide_3132 Alide_3132 Alide_3132 3266275 3266793 + Sterol-binding domain protein PFAM: Sterol-binding domain protein~KEGG: ajs:Ajs_3222 hypothetical protein gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3132 Alide_3133 Alide_3133 Alide_3133 3266790 3267197 + DGC domain protein PFAM: DGC domain protein~KEGG: ajs:Ajs_3223 hypothetical protein gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3133 Alide_3134 Alide_3134 Alide_3134 3267194 3267778 + 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KEGG: dia:Dtpsy_2577 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~PFAM: flavoprotein gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3134 Alide_3135 Alide_3135 Alide_3135 3267834 3269318 + UbiD family decarboxylase KEGG: ajs:Ajs_3225 3-octaprenyl-4hydroxybenzoate decarboxylase~TIGRFAM: UbiD family decarboxylase~PFAM: Carboxylyase-related protein gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3135 Alide_3136 Alide_3136 Alide_3136 3269337 3270485 + cytochrome P450 PFAM: cytochrome P450~KEGG: ajs:Ajs_3226 cytochrome P450 gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3136 Alide_3137 Alide_3137 Alide_3137 3270526 3271890 + RNA-metabolising metallo-beta-lactamase PFAM: RNA-metabolising metallo-beta-lactamase~KEGG: dia:Dtpsy_2580 beta-lactamase domain protein gene gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3137 Alide_3138 Alide_3138 Alide_3138 3272079 3273017 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dia:Dtpsy_2581 transcriptional regulator%2C LysR family gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3138 Alide_3139 Alide_3139 Alide_3139 3273038 3274459 + 3-isopropylmalate dehydratase%2C large subunit KEGG: ajs:Ajs_3229 isopropylmalate isomerase large subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C large subunit~PFAM: aconitate hydratase domain-containing protein gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3139 Alide_3140 Alide_3140 Alide_3140 3274483 3274608 + Entericidin EcnAB PFAM: Entericidin EcnAB~KEGG: dac:Daci_5236 entericidin EcnAB gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3140 Alide_3141 Alide_3141 Alide_3141 3274632 3275282 + 3-isopropylmalate dehydratase%2C small subunit KEGG: dia:Dtpsy_2585 isopropylmalate isomerase small subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit~PFAM: aconitate hydratase domain-containing protein gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3141 Alide_3142 Alide_3142 Alide_3142 3275357 3276427 + 3-isopropylmalate dehydrogenase TIGRFAM: 3-isopropylmalate dehydrogenase~KEGG: dia:Dtpsy_2586 3-isopropylmalate dehydrogenase~PFAM: isocitrate/isopropylmalate dehydrogenase gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3142 Alide_3143 Alide_3143 Alide_3143 3276697 3277809 + aspartate-semialdehyde dehydrogenase TIGRFAM: aspartate-semialdehyde dehydrogenase~KEGG: ctt:CtCNB1_1004 aspartate-semialdehyde dehydrogenase~PFAM: Semialdehyde dehydrogenase dimerisation region%3B Semialdehyde dehydrogenase NAD - binding gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3143 Alide_3144 Alide_3144 Alide_3144 3278032 3280704 + FimV N-terminal domain protein TIGRFAM: FimV N-terminal domain%3B FimV C-terminal domain~KEGG: ajs:Ajs_3236 putative transmembrane protein gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3144 Alide_3145 Alide_3145 Alide_3145 3280769 3281587 + tRNA pseudouridine synthase A KEGG: dia:Dtpsy_2590 tRNA pseudouridine synthase A~TIGRFAM: tRNA pseudouridine synthase A~PFAM: Pseudouridine synthase I%2C TruA%2C alpha/beta domain gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3145 Alide_3146 Alide_3146 Alide_3146 3281584 3282300 + Phosphoribosylanthranilate isomerase KEGG: ajs:Ajs_3238 phosphoribosylanthranilate isomerase~PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3146 Alide_3147 Alide_3147 Alide_3147 3282301 3283569 + tryptophan synthase%2C beta subunit KEGG: ajs:Ajs_3239 tryptophan synthase subunit beta~TIGRFAM: tryptophan synthase%2C beta subunit~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3147 Alide_3148 Alide_3148 Alide_3148 3283566 3284375 + tryptophan synthase%2C alpha subunit TIGRFAM: tryptophan synthase%2C alpha subunit~KEGG: ajs:Ajs_3240 tryptophan synthase subunit alpha~PFAM: tryptophan synthase alpha chain gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3148 Alide_3149 Alide_3149 Alide_3149 3284404 3285276 + acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit KEGG: ajs:Ajs_3241 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha~TIGRFAM: acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit~PFAM: carboxyl transferase gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3149 Alide_3150 Alide_3150 Alide_3150 3285353 3285901 - protein of unknown function YGGT PFAM: protein of unknown function YGGT~KEGG: dia:Dtpsy_2595 protein of unknown function YGGT gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3150 Alide_3151 Alide_3151 Alide_3151 3285995 3286630 + peptidase S16 lon domain protein KEGG: vei:Veis_4864 peptidase S16%2C lon domain-containing protein~PFAM: peptidase S16 lon domain protein~SMART: peptidase S16 lon domain protein gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3151 Alide_3152 Alide_3152 Alide_3152 3286667 3288568 + polysaccharide biosynthesis protein CapD PFAM: polysaccharide biosynthesis protein CapD~KEGG: pol:Bpro_3983 polysaccharide biosynthesis protein CapD gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3152 Alide_3153 Alide_3153 Alide_3153 3288565 3289797 + polysaccharide biosynthesis protein PFAM: polysaccharide biosynthesis protein~KEGG: bpt:Bpet1527 hypothetical protein gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3153 Alide_3154 Alide_3154 Alide_3154 3289781 3290383 + acetyltransferase KEGG: bpt:Bpet1526 acetyltransferase gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3154 Alide_3155 Alide_3155 Alide_3155 3290385 3291434 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: bpt:Bpet1525 glycosyltransferase gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3155 Alide_3156 Alide_3156 Alide_3156 3291431 3292459 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: bpt:Bpet1524 glycosyltransferase gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3156 Alide_3157 Alide_3157 Alide_3157 3292456 3293151 + Methyltransferase type 11 PFAM: Methyltransferase type 11~KEGG: mpt:Mpe_A0605 hypothetical protein gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3157 Alide_3158 Alide_3158 Alide_3158 3293148 3294320 + DegT/DnrJ/EryC1/StrS aminotransferase PFAM: DegT/DnrJ/EryC1/StrS aminotransferase~KEGG: mpt:Mpe_A0607 lipopolysaccharide biosynthesis protein gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3158 Alide_3159 Alide_3159 Alide_3159 3294327 3294953 + sugar transferase PFAM: sugar transferase~KEGG: lch:Lcho_0300 sugar transferase gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3159 Alide_3160 Alide_3160 Alide_3160 3294993 3296540 + lysyl-tRNA synthetase TIGRFAM: lysyl-tRNA synthetase~KEGG: ajs:Ajs_3250 lysyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B nucleic acid binding OB-fold tRNA/helicase-type gene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3160 Alide_3161 Alide_3161 Alide_3161 3296537 3297199 + MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel~KEGG: ajs:Ajs_3252 small-conductance mechanosensitive channel-like protein gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3161 Alide_3162 Alide_3162 Alide_3162 3297392 3298510 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: dac:Daci_4331 extracellular ligand-binding receptor gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3162 Alide_3163 Alide_3163 Alide_3163 3298631 3299557 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dia:Dtpsy_2607 inner-membrane translocator gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3163 Alide_3164 Alide_3164 Alide_3164 3299557 3300816 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dia:Dtpsy_2608 leucine/isoleucine/valine transporter permease subunit gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3164 Alide_3165 Alide_3165 Alide_3165 3300816 3301589 + ABC transporter related protein KEGG: dac:Daci_4334 leucine/isoleucine/valine transporter ATP-binding subunit~PFAM: ABC transporter related~SMART: AAA ATPase gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3165 Alide_3166 Alide_3166 Alide_3166 3301589 3302299 + ABC transporter related protein KEGG: dia:Dtpsy_2610 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3166 Alide_3167 Alide_3167 Alide_3167 3302380 3303447 - phosphofructokinase PFAM: phosphofructokinase~KEGG: ajs:Ajs_3260 6-phosphofructokinase gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3167 Alide_3168 Alide_3168 Alide_3168 3303444 3304526 - glycoside hydrolase family 3 domain protein PFAM: glycoside hydrolase family 3 domain protein~KEGG: dia:Dtpsy_2614 beta-N-acetylhexosaminidase gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3168 Alide_3169 Alide_3169 Alide_3169 3304591 3304983 - holo-acyl-carrier-protein synthase KEGG: dia:Dtpsy_2615 4'-phosphopantetheinyl transferase~TIGRFAM: holo-acyl-carrier-protein synthase~PFAM: 4'-phosphopantetheinyl transferase gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3169 Alide_3170 Alide_3170 Alide_3170 3305041 3305808 - pyridoxal phosphate biosynthetic protein PdxJ TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ~KEGG: dia:Dtpsy_2616 pyridoxine 5'-phosphate synthase~PFAM: Pyridoxal phosphate biosynthetic protein PdxJ gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3170 Alide_3171 Alide_3171 Alide_3171 3305805 3306578 - DNA repair protein RecO KEGG: ajs:Ajs_3265 DNA repair protein RecO~TIGRFAM: DNA repair protein RecO~PFAM: Recombination protein O RecO gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3171 Alide_3172 Alide_3172 Alide_3172 3306800 3307741 - GTP-binding protein Era KEGG: dia:Dtpsy_2619 GTP-binding protein Era~TIGRFAM: GTP-binding protein Era%3B small GTP-binding protein~PFAM: GTP-binding protein HSR1-related%3B KH type 2 domain protein gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3172 Alide_3173 Alide_3173 Alide_3173 3307810 3308496 - ribonuclease III SMART: ribonuclease III%3B double-stranded RNA binding domain protein~TIGRFAM: ribonuclease III~KEGG: ajs:Ajs_3267 ribonuclease III~PFAM: ribonuclease III%3B double-stranded RNA binding domain protein gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3173 Alide_3174 Alide_3174 Alide_3174 3308499 3308864 - putative transmembrane protein KEGG: dia:Dtpsy_2621 putative transmembrane protein gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3174 Alide_3175 Alide_3175 Alide_3175 3308878 3309852 - signal peptidase I KEGG: dia:Dtpsy_2622 signal peptidase I~TIGRFAM: signal peptidase I~PFAM: Peptidase S24/S26A/S26B%2C conserved region%3B Peptidase S26%2C conserved region gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3175 Alide_3176 Alide_3176 Alide_3176 3309859 3311667 - GTP-binding protein LepA KEGG: dia:Dtpsy_2623 GTP-binding protein LepA~TIGRFAM: GTP-binding protein LepA%3B small GTP-binding protein~PFAM: GTP-binding protein LepA domain protein%3B protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor G domain-containing protein gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3176 Alide_3177 Alide_3177 Alide_3177 3312092 3313573 - protease Do SMART: PDZ/DHR/GLGF domain protein~TIGRFAM: protease Do~KEGG: dia:Dtpsy_2624 protease Do~PFAM: peptidase S1 and S6 chymotrypsin/Hap%3B PDZ/DHR/GLGF domain protein gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3177 Alide_3178 Alide_3178 Alide_3178 3313683 3314681 - MucB/RseB family protein KEGG: dia:Dtpsy_2625 sigma E regulatory protein%2C MucB/RseB~manually curated~PFAM: MucB/RseB family protein gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3178 Alide_3179 Alide_3179 Alide_3179 3314792 3315442 - Anti sigma-E protein RseA family protein PFAM: Anti sigma-E protein RseA family protein~KEGG: dia:Dtpsy_2626 anti sigma-E protein%2C RseA gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3179 Alide_3180 Alide_3180 Alide_3180 3315467 3316102 - RNA polymerase sigma factor RpoE KEGG: dia:Dtpsy_2627 RNA polymerase sigma factor RpoE~TIGRFAM: RNA polymerase sigma factor RpoE%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3180 Alide_3181 Alide_3181 Alide_3181 3316099 3316620 - hypothetical protein KEGG: dia:Dtpsy_2628 hypothetical protein gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3181 Alide_3182 Alide_3182 Alide_3182 3316683 3317927 - 3-oxoacyl-(acyl-carrier-protein) synthase 2 KEGG: dia:Dtpsy_2629 3-oxoacyl-(acyl-carrier-protein) synthase 2~TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2~PFAM: Beta-ketoacyl synthase gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3182 Alide_3183 Alide_3183 Alide_3183 3317986 3318225 - acyl carrier protein KEGG: ctt:CtCNB1_0973 acyl carrier protein~TIGRFAM: acyl carrier protein~PFAM: phosphopantetheine-binding gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3183 Alide_3184 Alide_3184 Alide_3184 3318329 3319066 - 3-oxoacyl-(acyl-carrier-protein) reductase KEGG: dia:Dtpsy_2631 3-oxoacyl-(acyl-carrier-protein) reductase~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase~PFAM: short-chain dehydrogenase/reductase SDR gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3184 Alide_3185 Alide_3185 Alide_3185 3319063 3320016 - malonyl CoA-acyl carrier protein transacylase KEGG: ajs:Ajs_3279 [acyl-carrier-protein] S-malonyltransferase~TIGRFAM: malonyl CoA-acyl carrier protein transacylase~PFAM: Acyl transferase gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3185 Alide_3186 Alide_3186 Alide_3186 3320078 3321058 - 3-oxoacyl-(acyl-carrier-protein) synthase III TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III~KEGG: dia:Dtpsy_2633 3-oxoacyl-(acyl carrier protein) synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3186 Alide_3187 Alide_3187 Alide_3187 3321080 3322111 - fatty acid/phospholipid synthesis protein PlsX manually curated~TIGRFAM: fatty acid/phospholipid synthesis protein PlsX~KEGG: dia:Dtpsy_2634 putative glycerol-3-phosphate acyltransferase PlsX~PFAM: fatty acid synthesis plsX protein gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3187 Alide_3188 Alide_3188 Alide_3188 3322234 3322416 - ribosomal protein L32 KEGG: aav:Aave_1181 50S ribosomal protein L32~TIGRFAM: ribosomal protein L32~PFAM: ribosomal L32p protein gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3188 Alide_3189 Alide_3189 Alide_3189 3322553 3323104 - protein of unknown function DUF177 PFAM: protein of unknown function DUF177~KEGG: dia:Dtpsy_2636 protein of unknown function DUF177 gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3189 Alide_3190 Alide_3190 Alide_3190 3323131 3323730 + maf protein KEGG: dia:Dtpsy_2637 maf protein~TIGRFAM: maf protein~PFAM: Maf family protein gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3190 Alide_3191 Alide_3191 Alide_3191 3323727 3324512 + Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~KEGG: dia:Dtpsy_2638 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3191 Alide_3192 Alide_3192 Alide_3192 3324517 3325557 - peptidase S49 PFAM: peptidase S49~KEGG: dia:Dtpsy_2639 peptidase S49 gene gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3192 Alide_3193 Alide_3193 Alide_3193 3325562 3325933 - Rieske (2Fe-2S) iron-sulfur domain protein PFAM: Rieske [2Fe-2S] iron-sulphur domain~KEGG: dia:Dtpsy_2640 Rieske (2Fe-2S) domain protein gene gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3193 Alide_3194 Alide_3194 Alide_3194 3325936 3326607 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 KEGG: dia:Dtpsy_2641 HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Haloacid dehalogenase domain protein hydrolase gene gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3194 Alide_3195 Alide_3195 Alide_3195 3326600 3327619 - pseudouridine synthase%2C RluA family TIGRFAM: pseudouridine synthase%2C RluA family~PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein%3B Zinc finger%2C FLYWCH-type~KEGG: dia:Dtpsy_2642 pseudouridine synthase%2C RluA family~SMART: RNA-binding S4 domain protein gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3195 Alide_3196 Alide_3196 Alide_3196 3328209 3331277 + ribonuclease%2C Rne/Rng family KEGG: ajs:Ajs_3290 ribonuclease E~TIGRFAM: ribonuclease%2C Rne/Rng family~PFAM: RNA-binding protein AU-1/Ribonuclease E/G%3B RNA binding S1 domain protein gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3196 Alide_3197 Alide_3197 Alide_3197 3331436 3332209 + protein of unknown function DUF328 PFAM: protein of unknown function DUF328~KEGG: dia:Dtpsy_2644 hypothetical protein gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3197 Alide_3198 Alide_3198 Alide_3198 3332206 3333060 + Procollagen-proline dioxygenase PFAM: 2OG-Fe(II) oxygenase~KEGG: ajs:Ajs_3293 2OG-Fe(II) oxygenase~SMART: Prolyl 4-hydroxylase alpha subunit gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3198 Alide_3199 Alide_3199 Alide_3199 3333116 3333961 + 7-cyano-7-deazaguanine reductase TIGRFAM: 7-cyano-7-deazaguanine reductase~KEGG: ajs:Ajs_3294 7-cyano-7-deazaguanine reductase~PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3199 Alide_3200 Alide_3200 Alide_3200 3333991 3335553 - PAS sensor protein TIGRFAM: PAS sensor protein~PFAM: chemotaxis sensory transducer%3B PAS fold-3 domain protein%3B histidine kinase HAMP region domain protein~KEGG: dia:Dtpsy_2648 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor~SMART: chemotaxis sensory transducer%3B PAC repeat-containing protein gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3200 Alide_3201 Alide_3201 Alide_3201 3335715 3336908 - DNA-directed DNA polymerase KEGG: aav:Aave_1964 DNA-directed DNA polymerase~PFAM: UMUC domain protein DNA-repair protein gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3201 Alide_3202 Alide_3202 Alide_3202 3336984 3337877 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: bbr:BB0984 LysR family transcriptional regulator gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3202 Alide_3203 Alide_3203 Alide_3203 3338014 3338982 + hypothetical protein KEGG: bbr:BB0983 hypothetical protein gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3203 Alide_3204 Alide_3204 Alide_3204 3339013 3340239 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: bbr:BB0982 hypothetical protein gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3204 Alide_3205 Alide_3205 Alide_3205 3340276 3342114 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: bbr:BB0981 acyl-CoA dehydrogenase gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3205 Alide_3206 Alide_3206 Alide_3206 3342127 3343059 - hypothetical protein KEGG: dia:Dtpsy_2650 hypothetical protein gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3206 Alide_3207 Alide_3207 Alide_3207 3343232 3344404 - L-lactate dehydrogenase (cytochrome) KEGG: ajs:Ajs_3298 (S)-2-hydroxy-acid oxidase~PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3207 Alide_3208 Alide_3208 Alide_3208 3344496 3345011 - OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: dac:Daci_3484 OmpA/MotB domain-containing protein gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3208 Alide_3209 Alide_3209 Alide_3209 3345008 3346240 - diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein%3B histidine kinase HAMP region domain protein~KEGG: dac:Daci_3483 diguanylate cyclase~SMART: GGDEF domain containing protein%3B histidine kinase HAMP region domain protein gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3209 Alide_3210 Alide_3210 Alide_3210 3346261 3346782 - hypothetical protein KEGG: dac:Daci_3482 hypothetical protein gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3210 Alide_3211 Alide_3211 Alide_3211 3346847 3349012 - penicillin-binding protein 1C TIGRFAM: penicillin-binding protein 1C~KEGG: ajs:Ajs_3299 penicillin-binding protein 1C~PFAM: glycosyl transferase family 51%3B penicillin-binding protein transpeptidase%3B Penicillin-binding domain protein gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3211 Alide_3212 Alide_3212 Alide_3212 3349012 3349893 - hypothetical protein KEGG: dia:Dtpsy_2653 hypothetical protein gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3212 Alide_3213 Alide_3213 Alide_3213 3350218 3351465 - putative dehydratase/racemase KEGG: bbr:BB0464 putative dehydratase/racemase gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3213 Alide_3214 Alide_3214 Alide_3214 3351599 3353248 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: app:CAP2UW1_2497 acyl-CoA dehydrogenase domain protein gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3214 Alide_3215 Alide_3215 Alide_3215 3353245 3355344 - CoA-binding domain protein PFAM: CoA-binding domain protein~KEGG: dac:Daci_1885 CoA-binding domain-containing protein gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3215 Alide_3216 Alide_3216 Alide_3216 3355344 3356501 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: rme:Rmet_5425 putative butyryl-CoA dehydrogenase gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3216 Alide_3217 Alide_3217 Alide_3217 3356541 3357536 - Asparaginase KEGG: mms:mma_1624 L-asparaginase~PFAM: Asparaginase/glutaminase gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3217 Alide_3218 Alide_3218 Alide_3218 3357544 3358536 - hypothetical protein KEGG: vap:Vapar_4821 hypothetical protein gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3218 Alide_3219 Alide_3219 Alide_3219 3358669 3359550 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: pol:Bpro_2067 LysR family transcriptional regulator gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3219 Alide_3220 Alide_3220 Alide_3220 3359657 3360739 - metallophosphoesterase PFAM: metallophosphoesterase~KEGG: dac:Daci_4972 metallophosphoesterase gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3220 Alide_3221 Alide_3221 Alide_3221 3360774 3366710 - alpha-2-macroglobulin domain protein PFAM: alpha-2-macroglobulin domain protein%3B alpha-2-macroglobulin domain protein 2~KEGG: dia:Dtpsy_2661 alpha-2-macroglobulin domain protein gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3221 Alide_3222 Alide_3222 Alide_3222 3366842 3367816 - hypothetical protein KEGG: ajs:Ajs_3311 hypothetical protein gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3222 Alide_3223 Alide_3223 Alide_3223 3367834 3369294 - argininosuccinate lyase KEGG: dia:Dtpsy_2664 argininosuccinate lyase~TIGRFAM: argininosuccinate lyase~PFAM: fumarate lyase gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3223 Alide_3224 Alide_3224 Alide_3224 3369345 3370409 + histidine kinase internal region protein PFAM: histidine kinase internal region%3B ATP-binding region ATPase domain protein~KEGG: ajs:Ajs_3313 histidine kinase internal region gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3224 Alide_3225 Alide_3225 Alide_3225 3370546 3371331 + lipoprotein%2C YaeC family KEGG: dia:Dtpsy_2507 lipoprotein%2C YaeC family~TIGRFAM: lipoprotein%2C YaeC family~PFAM: NLPA lipoprotein gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3225 Alide_3226 Alide_3226 Alide_3226 3371458 3373089 - SpoVR family protein PFAM: SpoVR family protein~KEGG: dac:Daci_2329 SpoVR family protein gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3226 Alide_3227 Alide_3227 Alide_3227 3373086 3374354 - protein of unknown function DUF444 PFAM: protein of unknown function DUF444~KEGG: dac:Daci_2328 hypothetical protein gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3227 Alide_3228 Alide_3228 Alide_3228 3374399 3376321 - PrkA AAA domain protein KEGG: ctt:CtCNB1_1949 putative serine protein kinase%2C PrkA~PFAM: PrkA AAA domain protein%3B PrkA serine kinase~SMART: PrkA AAA domain protein gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3228 Alide_3229 Alide_3229 Alide_3229 3376622 3377113 - transcriptional regulator%2C Rrf2 family KEGG: dia:Dtpsy_2510 transcriptional regulator%2C BadM/Rrf2 family~TIGRFAM: transcriptional regulator%2C Rrf2 family~PFAM: protein of unknown function UPF0074 gene gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3229 Alide_3230 Alide_3230 Alide_3230 3377208 3377930 + iron-sulfur cluster repair di-iron protein KEGG: dia:Dtpsy_2511 hemerythrin HHE cation binding domain protein~TIGRFAM: iron-sulfur cluster repair di-iron protein~PFAM: protein of unknown function DUF542 ScdA domain protein%3B Hemerythrin HHE cation binding domain protein gene gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3230 Alide_3231 Alide_3231 Alide_3231 3377933 3378304 + globin-like protein KEGG: aav:Aave_1570 globin-like protein gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3231 Alide_3232 Alide_3232 Alide_3232 3378301 3378525 - hypothetical protein KEGG: dia:Dtpsy_2512 hypothetical protein gene gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3232 Alide_3233 Alide_3233 Alide_3233 3378525 3378965 - hypothetical protein KEGG: ajs:Ajs_3166 hypothetical protein gene gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3233 Alide_3234 Alide_3234 Alide_3234 3378968 3379969 - aldo/keto reductase PFAM: aldo/keto reductase~KEGG: ajs:Ajs_3167 aldo/keto reductase gene gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3234 Alide_3235 Alide_3235 Alide_3235 3380047 3380247 - SlyX family protein KEGG: dia:Dtpsy_2515 SlyX family protein gene gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3235 Alide_3236 Alide_3236 Alide_3236 3380249 3381442 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: aav:Aave_1563 GntR family transcriptional regulator gene gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3236 Alide_3237 Alide_3237 Alide_3237 3381595 3382065 + transcription activator effector binding protein PFAM: transcription activator effector binding~KEGG: dac:Daci_3099 AraC family transcriptional regulator gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3237 Alide_3238 Alide_3238 Alide_3238 3382062 3383048 - hypothetical protein KEGG: dac:Daci_2828 hypothetical protein gene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3238 Alide_3239 Alide_3239 Alide_3239 3383083 3384546 - Amidase PFAM: Amidase~KEGG: dac:Daci_2827 amidase gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3239 Alide_3240 Alide_3240 Alide_3240 3384657 3385610 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dac:Daci_2826 LysR family transcriptional regulator gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3240 Alide_3241 Alide_3241 Alide_3241 3385607 3386245 + endonuclease III SMART: HhH-GPD family protein%3B iron-sulfur cluster loop~TIGRFAM: endonuclease III~KEGG: ajs:Ajs_3170 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase~PFAM: HhH-GPD family protein%3B iron-sulfur cluster loop gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3241 Alide_3242 Alide_3242 Alide_3242 3386262 3386765 - Appr-1-p processing domain protein KEGG: pag:PLES_35831 hypothetical protein~PFAM: Appr-1-p processing domain protein~SMART: Appr-1-p processing domain protein gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3242 Alide_3243 Alide_3243 Alide_3243 3386855 3387913 - nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase~KEGG: ajs:Ajs_3176 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase~PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3243 Alide_3244 Alide_3244 Alide_3244 3387972 3389444 - cobyric acid synthase CobQ KEGG: ajs:Ajs_3178 adenosylcobyric acid synthase (glutamine-hydrolysing)~TIGRFAM: cobyric acid synthase CobQ~PFAM: CobB/CobQ domain protein glutamine amidotransferase gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3244 Alide_3245 Alide_3245 Alide_3245 3389441 3390427 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: dia:Dtpsy_2532 aminotransferase class I and II gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3245 Alide_3246 Alide_3246 Alide_3246 3390420 3391394 - cobalamin biosynthesis protein CobD KEGG: ajs:Ajs_3180 adenosylcobinamide-phosphate synthase~TIGRFAM: cobalamin biosynthesis protein CobD~PFAM: cobalamin biosynthesis protein CbiB gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3246 Alide_3247 Alide_3247 Alide_3247 3391603 3392109 + putative type-4 fimbrial pilin related protein KEGG: ajs:Ajs_3182 putative type-4 fimbrial pilin related signal peptide protein gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3247 Alide_3248 Alide_3248 Alide_3248 3392116 3392757 + type IV pilus modification protein PilV TIGRFAM: type IV pilus modification protein PilV~KEGG: dac:Daci_5194 type IV pilus modification protein PilV gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3248 Alide_3249 Alide_3249 Alide_3249 3392760 3393635 + hypothetical protein KEGG: dac:Daci_5195 hypothetical protein gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3249 Alide_3250 Alide_3250 Alide_3250 3393647 3394396 + hypothetical protein KEGG: dac:Daci_5196 hypothetical protein gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3250 Alide_3251 Alide_3251 Alide_3251 3394488 3398225 + FG-GAP repeat-containing protein KEGG: dac:Daci_5197 FG-GAP repeat-containing protein gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3251 Alide_3252 Alide_3252 Alide_3252 3398236 3398670 + fimbrial protein pilin KEGG: dia:Dtpsy_2540 fimbrial protein pilin gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3252 Alide_3253 Alide_3253 Alide_3253 3398708 3399820 + riboflavin biosynthesis protein RibD TIGRFAM: riboflavin biosynthesis protein RibD~KEGG: dia:Dtpsy_2542 riboflavin biosynthesis protein RibD~PFAM: bifunctional deaminase-reductase domain protein%3B CMP/dCMP deaminase zinc-binding gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3253 Alide_3254 Alide_3254 Alide_3254 3399844 3401454 + phospholipase D/Transphosphatidylase KEGG: dia:Dtpsy_2543 phospholipase D/transphosphatidylase~PFAM: phospholipase D/Transphosphatidylase~SMART: phospholipase D/Transphosphatidylase gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3254 Alide_3255 Alide_3255 Alide_3255 3401414 3402433 - dihydrouridine synthase DuS PFAM: dihydrouridine synthase DuS~KEGG: dia:Dtpsy_2544 dihydrouridine synthase DuS gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3255 Alide_3256 Alide_3256 Alide_3256 3402489 3403628 - methyltransferase small PFAM: methyltransferase small~KEGG: aav:Aave_1253 methyltransferase small gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3256 Alide_3257 Alide_3257 Alide_3257 3403654 3404175 - GCN5-related N-acetyltransferase KEGG: dia:Dtpsy_2546 GCN5-related N-acetyltransferase~manually curated~PFAM: GCN5-related N-acetyltransferase gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3257 Alide_3258 Alide_3258 Alide_3258 3404252 3405712 - Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: dia:Dtpsy_2547 aldehyde dehydrogenase gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3258 Alide_3259 Alide_3259 Alide_3259 3405832 3406194 - hypothetical protein KEGG: dia:Dtpsy_2549 hypothetical protein gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3259 Alide_3260 Alide_3260 Alide_3260 3406210 3408813 - ATP-dependent chaperone ClpB TIGRFAM: ATP-dependent chaperone ClpB~PFAM: ATPase AAA-2 domain protein%3B AAA ATPase central domain protein%3B Clp domain protein%3B Clp ATPase-like~KEGG: dia:Dtpsy_2550 ATP-dependent chaperone ClpB~SMART: AAA ATPase gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3260 Alide_3261 Alide_3261 Alide_3261 3408881 3409357 - molybdopterin biosynthesis MoaE protein PFAM: molybdopterin biosynthesis MoaE protein~KEGG: ajs:Ajs_3199 molybdopterin synthase subunit MoaE gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3261 Alide_3262 Alide_3262 Alide_3262 3409414 3409668 + hypothetical protein KEGG: dia:Dtpsy_2552 hypothetical protein gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3262 Alide_3263 Alide_3263 Alide_3263 3409781 3409924 + hypothetical protein KEGG: dia:Dtpsy_2553 hypothetical protein gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3263 Alide_3264 Alide_3264 Alide_3264 3410007 3410318 + hypothetical protein KEGG: dia:Dtpsy_2554 hypothetical protein gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3264 Alide_3265 Alide_3265 Alide_3265 3410583 3411485 + dihydrodipicolinate synthase KEGG: dac:Daci_5213 dihydrodipicolinate synthase~TIGRFAM: dihydrodipicolinate synthase~PFAM: dihydrodipicolinate synthetase gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3265 Alide_3266 Alide_3266 Alide_3266 3411472 3411732 - molybdopterin converting factor%2C subunit 1 KEGG: dia:Dtpsy_2555 molybdopterin converting factor%2C subunit 1~TIGRFAM: molybdopterin converting factor%2C subunit 1~PFAM: thiamineS protein gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3266 Alide_3267 Alide_3267 Alide_3267 3411729 3412976 - molybdenum cofactor synthesis domain protein KEGG: ajs:Ajs_3203 molybdenum cofactor synthesis domain-containing protein~TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: MoeA domain protein domain I and II%3B molybdopterin binding domain%3B MoeA domain protein domain IV gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3267 Alide_3268 Alide_3268 Alide_3268 3412973 3413524 - molybdopterin-guanine dinucleotide biosynthesis protein B TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B~KEGG: dia:Dtpsy_2557 molybdopterin-guanine dinucleotide biosynthesis protein B gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3268 Alide_3269 Alide_3269 Alide_3269 3413598 3415028 - threonine synthase TIGRFAM: threonine synthase~KEGG: dia:Dtpsy_2558 threonine synthase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit gene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3269 Alide_3270 Alide_3270 Alide_3270 3415039 3415467 - PilT protein domain protein PFAM: PilT protein domain protein~KEGG: geo:Geob_1146 PilT protein domain protein gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3270 Alide_3271 Alide_3271 Alide_3271 3415473 3415736 - prevent-host-death family protein TIGRFAM: prevent-host-death family protein~KEGG: bts:Btus_3191 prevent-host-death family protein gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3271 Alide_3272 Alide_3272 Alide_3272 3415780 3417114 - Homoserine dehydrogenase KEGG: ajs:Ajs_3206 homoserine dehydrogenase~PFAM: homoserine dehydrogenase%3B homoserine dehydrogenase NAD-binding%3B amino acid-binding ACT domain protein gene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3272 Alide_3273 Alide_3273 Alide_3273 3417186 3418418 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: dia:Dtpsy_2560 aminotransferase AlaT gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3273 Alide_3274 Alide_3274 Alide_3274 3418537 3418908 + protein of unknown function DUF498 PFAM: protein of unknown function DUF498~KEGG: dia:Dtpsy_2561 protein of unknown function DUF498 gene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3274 Alide_3275 Alide_3275 Alide_3275 3419665 3420621 - hypothetical protein KEGG: vap:Vapar_5507 hypothetical protein gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3275 Alide_3276 Alide_3276 Alide_3276 3420836 3421984 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: rme:Rmet_5530 acyl-CoA dehydrogenase gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3276 Alide_3277 Alide_3277 Alide_3277 3421993 3423108 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: reh:H16_B0372 pimeloyl-CoA dehydrogenase (small subunit) gene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3277 Alide_3278 Alide_3278 Alide_3278 3423416 3424348 - Electron transfer flavoprotein alpha subunit PFAM: Electron transfer flavoprotein alpha subunit %3B Electron transfer flavoprotein alpha/beta-subunit~KEGG: rpi:Rpic_2640 electron transfer flavoprotein alpha subunit gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3278 Alide_3279 Alide_3279 Alide_3279 3424363 3425112 - Electron transfer flavoprotein alpha/beta-subunit PFAM: Electron transfer flavoprotein alpha/beta-subunit~KEGG: dia:Dtpsy_2299 electron transfer flavoprotein alpha/beta-subunit gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3279 Alide_3280 Alide_3280 Alide_3280 3425159 3426136 - hypothetical protein KEGG: vap:Vapar_1676 hypothetical protein gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3280 Alide_3281 Alide_3281 Alide_3281 3426153 3427337 - acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~KEGG: vap:Vapar_0843 acetyl-CoA acetyltransferase~PFAM: Thiolase-like gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3281 Alide_3282 Alide_3282 Alide_3282 3427352 3427753 - protein of unknown function DUF35 PFAM: protein of unknown function DUF35~KEGG: bbr:BB4332 hypothetical protein gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3282 Alide_3283 Alide_3283 Alide_3283 3427755 3428885 - hypothetical protein KEGG: vei:Veis_4266 hypothetical protein gene gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3283 Alide_3284 Alide_3284 Alide_3284 3428888 3429664 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: bxe:Bxe_C0267 short chain enoyl-CoA hydratase gene gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3284 Alide_3285 Alide_3285 Alide_3285 3429681 3430847 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: fal:FRAAL3384 putative acyl-CoA dehydrogenase gene gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3285 Alide_3286 Alide_3286 Alide_3286 3431018 3433171 + CoA-binding domain protein PFAM: CoA-binding domain protein%3B ATP-grasp domain protein~KEGG: reu:Reut_B4556 CoA-binding gene gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3286 Alide_3287 Alide_3287 Alide_3287 3433168 3433572 + protein of unknown function DUF35 PFAM: protein of unknown function DUF35~KEGG: rpc:RPC_1073 hypothetical protein gene gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3287 Alide_3288 Alide_3288 Alide_3288 3433569 3434726 + thiolase KEGG: rpc:RPC_1074 thiolase gene gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3288 Alide_3289 Alide_3289 Alide_3289 3434779 3435552 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: swi:Swit_0344 enoyl-CoA hydratase gene gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3289 Alide_3290 Alide_3290 Alide_3290 3435642 3437750 + 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B Enoyl-CoA hydratase/isomerase%3B 3-hydroxyacyl-CoA dehydrogenase domain-containing protein~KEGG: rme:Rmet_5110 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase gene gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3290 Alide_3291 Alide_3291 Alide_3291 3438009 3438400 + pseudogene gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3291 Alide_3292 Alide_3292 Alide_3292 3438437 3438739 + pseudogene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3292 Alide_3293 Alide_3293 Alide_3293 3438822 3439679 - Transcriptional regulator IclR KEGG: gct:GC56T3_1469 transcriptional regulator%2C IclR family~PFAM: Transcriptional regulator IclR %3B regulatory protein IclR~SMART: regulatory protein IclR gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3293 Alide_3294 Alide_3294 Alide_3294 3439717 3440862 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: pol:Bpro_5276 acyl-CoA dehydrogenase-like gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3294 Alide_3295 Alide_3295 Alide_3295 3440871 3442037 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: vap:Vapar_1314 acyl-CoA dehydrogenase domain protein gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3295 Alide_3296 Alide_3296 Alide_3296 3442046 3442855 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: swi:Swit_0321 1%2C4-dihydroxy-2-naphthoate synthase gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3296 Alide_3297 Alide_3297 Alide_3297 3442928 3443497 + gamma-BHC dehydrochlorinase KEGG: vap:Vapar_5494 gamma-BHC dehydrochlorinase gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3297 Alide_3298 Alide_3298 Alide_3298 3443599 3444594 + hypothetical protein KEGG: reu:Reut_B3884 hypothetical protein gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3298 Alide_3299 Alide_3299 Alide_3299 3444684 3445409 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: azl:AZL_d00150 3-hydroxybutyrate dehydrogenase gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3299 Alide_3300 Alide_3300 Alide_3300 3445441 3446685 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: pag:PLES_04421 putative acyl-CoA transferase gene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3300 Alide_3301 Alide_3301 Alide_3301 3446719 3447480 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bbt:BBta_4672 putative 3-oxoacyl-(acyl-carrier-protein) reductase gene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3301 Alide_3302 Alide_3302 Alide_3302 3447511 3448263 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: ara:Arad_7507 3-oxoacyl-(acyl-carrier-protein) reductase protein gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3302 Alide_3303 Alide_3303 Alide_3303 3448275 3449462 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: pde:Pden_3227 L-carnitine dehydratase/bile acid-inducible protein F gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3303 Alide_3304 Alide_3304 Alide_3304 3449693 3450658 + extra-cytoplasmic solute receptor KEGG: reh:H16_B0202 extra-cytoplasmic solute receptor gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3304 Alide_3305 Alide_3305 Alide_3305 3450731 3451801 + NADH:flavin oxidoreductase/NADH oxidase PFAM: NADH:flavin oxidoreductase/NADH oxidase~KEGG: gbm:Gbem_2134 NADH:flavin oxidoreductase/NADH oxidase gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3305 Alide_3306 Alide_3306 Alide_3306 3451862 3452557 + Methyltransferase type 11 PFAM: Methyltransferase type 11~KEGG: ajs:Ajs_2354 methyltransferase type 11 gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3306 Alide_3307 Alide_3307 Alide_3307 3452554 3453066 - methylated-DNA/protein-cysteine methyltransferase KEGG: dia:Dtpsy_1019 methylated-DNA/protein-cysteine methyltransferase~TIGRFAM: methylated-DNA/protein-cysteine methyltransferase~PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding%3B methylguanine DNA methyltransferase ribonuclease domain protein gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3307 Alide_3308 Alide_3308 Alide_3308 3453173 3453742 - cob(I)alamin adenosyltransferase TIGRFAM: cob(I)alamin adenosyltransferase~KEGG: ctt:CtCNB1_1848 cob(I)alamin adenosyltransferase~PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3308 Alide_3309 Alide_3309 Alide_3309 3453766 3454542 - ABC transporter related protein manually curated~PFAM: ABC transporter related~KEGG: dia:Dtpsy_1017 ABC transporter related~SMART: AAA ATPase gene gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3309 Alide_3310 Alide_3310 Alide_3310 3454539 3455582 - transport system permease protein PFAM: transport system permease protein~KEGG: dia:Dtpsy_1016 transport system permease protein gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3310 Alide_3311 Alide_3311 Alide_3311 3455579 3456478 - periplasmic binding protein PFAM: periplasmic binding protein~KEGG: dia:Dtpsy_1015 periplasmic binding protein gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3311 Alide_3312 Alide_3312 Alide_3312 3456475 3457059 - Adenosylcobinamide-phosphate guanylyltransferase KEGG: dia:Dtpsy_1014 cobalbumin biosynthesis protein~PFAM: cobalbumin biosynthesis protein gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3312 Alide_3313 Alide_3313 Alide_3313 3457121 3458473 - CobB/CobQ domain protein glutamine amidotransferase PFAM: CobB/CobQ domain protein glutamine amidotransferase~KEGG: dia:Dtpsy_1013 CobB/CobQ domain protein glutamine amidotransferase gene gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3313 Alide_3314 Alide_3314 Alide_3314 3458475 3460268 - TonB-dependent receptor plug PFAM: TonB-dependent receptor plug%3B TonB-dependent receptor~KEGG: aav:Aave_1537 TonB-dependent receptor gene gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3314 Alide_3315 Alide_3315 Alide_3315 3460696 3460935 + hypothetical protein KEGG: ajs:Ajs_1095 hypothetical protein gene gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3315 Alide_3316 Alide_3316 Alide_3316 3460932 3461288 + protein of unknown function DUF710 PFAM: protein of unknown function DUF710~KEGG: dia:Dtpsy_1010 protein of unknown function DUF710 gene gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3316 Alide_3317 Alide_3317 Alide_3317 3461544 3464024 - diguanylate cyclase TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B PAS fold domain protein~KEGG: dac:Daci_2786 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~SMART: EAL domain protein%3B GGDEF domain containing protein%3B PAS domain containing protein gene gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3317 Alide_3318 Alide_3318 Alide_3318 3464021 3465268 - metal dependent phosphohydrolase TIGRFAM: metal dependent phophohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~KEGG: aav:Aave_1533 metal dependent phosphohydrolase~SMART: metal-dependent phosphohydrolase HD region gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3318 Alide_3319 Alide_3319 Alide_3319 3465429 3466151 - hypothetical protein KEGG: ajs:Ajs_1093 hypothetical protein gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3319 Alide_3320 Alide_3320 Alide_3320 3466155 3467537 - oxygen-independent coproporphyrinogen III oxidase TIGRFAM: oxygen-independent coproporphyrinogen III oxidase~PFAM: HemN domain protein%3B Radical SAM domain protein~KEGG: dia:Dtpsy_1008 coproporphyrinogen III oxidase~SMART: Elongator protein 3/MiaB/NifB gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3320 Alide_3321 Alide_3321 Alide_3321 3467708 3468451 + cyclic nucleotide-binding protein KEGG: ajs:Ajs_1091 CRP/FNR family transcriptional regulator~PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~SMART: regulatory protein Crp%3B cyclic nucleotide-binding gene gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3321 Alide_3322 Alide_3322 Alide_3322 3468486 3468773 - hypothetical protein KEGG: dia:Dtpsy_1006 hypothetical protein gene gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3322 Alide_3323 Alide_3323 Alide_3323 3468861 3469139 - hypothetical protein KEGG: dia:Dtpsy_1005 hypothetical protein gene gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3323 Alide_3324 Alide_3324 Alide_3324 3469199 3470641 - cytochrome c oxidase accessory protein CcoG TIGRFAM: cytochrome c oxidase accessory protein CcoG~KEGG: dia:Dtpsy_1004 cytochrome c oxidase accessory protein CcoG gene gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3324 Alide_3325 Alide_3325 Alide_3325 3470726 3471646 - cytochrome c oxidase%2C cbb3-type%2C subunit III KEGG: ajs:Ajs_1087 cytochrome c oxidase%2C cbb3-type%2C subunit III~TIGRFAM: cytochrome c oxidase%2C cbb3-type%2C subunit III~PFAM: cytochrome c class I gene gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3325 Alide_3326 Alide_3326 Alide_3326 3471676 3471813 - Cbb3-type cytochrome oxidase component KEGG: dia:Dtpsy_1002 Cbb3-type cytochrome oxidase component gene gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3326 Alide_3327 Alide_3327 Alide_3327 3471834 3472466 - cytochrome c oxidase%2C cbb3-type%2C subunit II KEGG: dia:Dtpsy_1001 cbb3-type cytochrome c oxidase subunit II~TIGRFAM: cytochrome c oxidase%2C cbb3-type%2C subunit II~PFAM: cytochrome C oxidase mono-heme subunit/FixO gene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3327 Alide_3328 Alide_3328 Alide_3328 3472486 3473925 - cytochrome c oxidase%2C cbb3-type%2C subunit I TIGRFAM: cytochrome c oxidase%2C cbb3-type%2C subunit I~KEGG: dia:Dtpsy_1000 cbb3-type cytochrome c oxidase subunit I~PFAM: cytochrome c oxidase subunit I gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3328 Alide_3329 Alide_3329 Alide_3329 3473992 3474129 - cytochrome oxidase maturation protein%2C cbb3-type KEGG: dia:Dtpsy_0999 cytochrome oxidase maturation protein%2C cbb3-type~TIGRFAM: cytochrome oxidase maturation protein%2C cbb3-type~PFAM: cytochrome oxidase maturation protein cbb3-type gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3329 Alide_3330 Alide_3330 Alide_3330 3474132 3476468 - heavy metal translocating P-type ATPase KEGG: dia:Dtpsy_0998 heavy metal translocating P-type ATPase~TIGRFAM: heavy metal translocating P-type ATPase%3B copper-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B Heavy metal transport/detoxification protein%3B Haloacid dehalogenase domain protein hydrolase gene gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3330 Alide_3331 Alide_3331 Alide_3331 3476631 3477074 + UspA domain-containing protein PFAM: UspA domain-containing protein~KEGG: dia:Dtpsy_0997 UspA domain protein gene gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3331 Alide_3332 Alide_3332 Alide_3332 3477184 3478737 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: dia:Dtpsy_0996 malonyl-CoA synthase gene gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3332 Alide_3333 Alide_3333 Alide_3333 3478748 3479569 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: ajs:Ajs_1079 enoyl-CoA hydratase/isomerase gene gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3333 Alide_3334 Alide_3334 Alide_3334 3479579 3480601 - hypothetical protein KEGG: dia:Dtpsy_0994 hypothetical protein gene gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3334 Alide_3335 Alide_3335 Alide_3335 3480665 3482092 - Malonyl-CoA decarboxylase KEGG: ajs:Ajs_1077 malonyl-CoA decarboxylase~PFAM: Malonyl-CoA decarboxylase gene gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3335 Alide_3336 Alide_3336 Alide_3336 3482089 3482757 - GntR domain protein KEGG: dia:Dtpsy_0992 transcriptional regulator%2C GntR family~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3336 Alide_3337 Alide_3337 Alide_3337 3482966 3483781 - prolipoprotein diacylglyceryl transferase KEGG: dia:Dtpsy_0991 prolipoprotein diacylglyceryl transferase~TIGRFAM: prolipoprotein diacylglyceryl transferase~PFAM: prolipoprotein diacylglyceryl transferase gene gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3337 Alide_3338 Alide_3338 Alide_3338 3483881 3484348 + bacterioferritin KEGG: dia:Dtpsy_0990 bacterioferritin~TIGRFAM: bacterioferritin~PFAM: Ferritin Dps family protein gene gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3338 Alide_3339 Alide_3339 Alide_3339 3484351 3484779 - thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: dia:Dtpsy_0989 thioesterase superfamily protein gene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3339 Alide_3340 Alide_3340 Alide_3340 3484920 3486776 - dihydroxy-acid dehydratase TIGRFAM: dihydroxy-acid dehydratase~KEGG: dia:Dtpsy_0988 dihydroxy-acid dehydratase~PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3340 Alide_3341 Alide_3341 Alide_3341 3487005 3488696 + dihydroxy-acid dehydratase TIGRFAM: dihydroxy-acid dehydratase~KEGG: dia:Dtpsy_0987 dihydroxy-acid dehydratase~PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase gene gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3341 Alide_3342 Alide_3342 Alide_3342 3488721 3488963 - hypothetical protein KEGG: dia:Dtpsy_0986 hypothetical protein gene gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3342 Alide_3343 Alide_3343 Alide_3343 3489071 3489373 + cytochrome c class I PFAM: cytochrome c class I~KEGG: dia:Dtpsy_0985 cytochrome c class I gene gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3343 Alide_3344 Alide_3344 Alide_3344 3489502 3490188 - lipoprotein releasing system%2C ATP-binding protein TIGRFAM: lipoprotein releasing system%2C ATP-binding protein~PFAM: ABC transporter related~KEGG: dia:Dtpsy_2754 lipoprotein releasing system%2C ATP-binding protein~SMART: AAA ATPase gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3344 Alide_3345 Alide_3345 Alide_3345 3490181 3491434 - lipoprotein releasing system%2C transmembrane protein%2C LolC/E family KEGG: dia:Dtpsy_2755 lipoprotein releasing system%2C transmembrane protein%2C LolC/E family~TIGRFAM: lipoprotein releasing system%2C transmembrane protein%2C LolC/E family~PFAM: protein of unknown function DUF214 gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3345 Alide_3346 Alide_3346 Alide_3346 3491529 3492479 + 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase PFAM: 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase~KEGG: dia:Dtpsy_2757 hypothetical protein gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3346 Alide_3347 Alide_3347 Alide_3347 3492476 3494191 + single-stranded-DNA-specific exonuclease RecJ KEGG: ajs:Ajs_3424 single-stranded-DNA-specific exonuclease RecJ~TIGRFAM: single-stranded-DNA-specific exonuclease RecJ~PFAM: phosphoesterase RecJ domain protein%3B phosphoesterase DHHA1 gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3347 Alide_3348 Alide_3348 Alide_3348 3494252 3496027 - chemotaxis sensory transducer KEGG: dia:Dtpsy_2762 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3348 Alide_3349 Alide_3349 Alide_3349 3496198 3497079 + PHP domain protein manually curated~PFAM: PHP domain protein~KEGG: dia:Dtpsy_2763 PHP domain protein~SMART: phosphoesterase PHP domain protein gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3349 Alide_3350 Alide_3350 Alide_3350 3497085 3497720 + Sua5/YciO/YrdC/YwlC family protein KEGG: dia:Dtpsy_2764 SUA5/YciO/YrdC/YwlC family protein~TIGRFAM: Sua5/YciO/YrdC/YwlC family protein~PFAM: SUA5/yciO/yrdC domain gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3350 Alide_3351 Alide_3351 Alide_3351 3497805 3498980 - chemotaxis sensory transducer KEGG: dac:Daci_5413 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3351 Alide_3352 Alide_3352 Alide_3352 3499322 3500029 + peptidase M50 PFAM: peptidase M50~KEGG: dia:Dtpsy_2770 peptidase M50 gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3352 Alide_3353 Alide_3353 Alide_3353 3500041 3501342 + tryptophanyl-tRNA synthetase TIGRFAM: tryptophanyl-tRNA synthetase~KEGG: dia:Dtpsy_2771 tryptophanyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3353 Alide_3354 Alide_3354 Alide_3354 3501545 3502276 + response regulator receiver KEGG: ctt:CtCNB1_0831 two component transcriptional regulator%2C winged~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3354 Alide_3355 Alide_3355 Alide_3355 3502400 3504052 + FecR protein KEGG: dac:Daci_5417 peptidoglycan-binding LysM~PFAM: FecR protein%3B Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding LysM gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3355 Alide_3356 Alide_3356 Alide_3356 3504093 3506399 + CHASE2 domain protein KEGG: dac:Daci_5418 histidine kinase~PFAM: CHASE2 domain protein%3B PAS fold-4 domain protein%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3356 Alide_3357 Alide_3357 Alide_3357 3506436 3507830 - sugar transferase%2C PEP-CTERM system associated TIGRFAM: sugar transferase%2C PEP-CTERM system associated%3B exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase~KEGG: rfr:Rfer_0702 undecaprenyl-phosphate galactosephosphotransferase~PFAM: sugar transferase gene gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3357 Alide_3358 Alide_3358 Alide_3358 3508013 3509950 - hypothetical protein KEGG: rfr:Rfer_0701 hypothetical protein gene gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3358 Alide_3359 Alide_3359 Alide_3359 3510218 3511159 - hypothetical protein KEGG: dac:Daci_5376 hypothetical protein gene gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3359 Alide_3360 Alide_3360 Alide_3360 3511216 3512532 - seryl-tRNA synthetase TIGRFAM: seryl-tRNA synthetase~KEGG: dia:Dtpsy_2772 seryl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Seryl-tRNA synthetase%2C class IIa-like gene gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3360 Alide_3361 Alide_3361 Alide_3361 3512585 3513262 + CBS domain containing protein KEGG: aav:Aave_3769 CBS domain-containing protein~PFAM: CBS domain containing protein~SMART: CBS domain containing protein gene gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3361 Alide_3362 Alide_3362 Alide_3362 3513284 3514612 - protein of unknown function DUF21 PFAM: protein of unknown function DUF21%3B CBS domain containing protein%3B transporter-associated region~KEGG: ajs:Ajs_3447 hypothetical protein gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3362 Alide_3363 Alide_3363 Alide_3363 3514820 3515776 - hydroxymethylbutenyl pyrophosphate reductase TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase~KEGG: ajs:Ajs_3448 4-hydroxy-3-methylbut-2-enyl diphosphate reductase~PFAM: LytB protein gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3363 Alide_3364 Alide_3364 Alide_3364 3515781 3516257 - peptidylprolyl isomerase FKBP-type PFAM: peptidylprolyl isomerase FKBP-type~KEGG: dia:Dtpsy_2776 peptidylprolyl isomerase FKBP-type gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3364 Alide_3365 Alide_3365 Alide_3365 3516339 3517052 + DNA repair protein RadC KEGG: ajs:Ajs_3450 DNA repair protein RadC~TIGRFAM: DNA repair protein RadC~PFAM: DNA repair protein RadC gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3365 Alide_3366 Alide_3366 Alide_3366 3517049 3518209 + hypothetical protein KEGG: dia:Dtpsy_2778 hypothetical protein gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3366 Alide_3367 Alide_3367 Alide_3367 3518206 3518856 + Smr protein/MutS2 KEGG: dia:Dtpsy_2779 Smr protein/MutS2~PFAM: Smr protein/MutS2~SMART: Smr protein/MutS2 gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3367 Alide_3368 Alide_3368 Alide_3368 3518954 3519922 + hypothetical protein KEGG: reu:Reut_B4844 hypothetical protein gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3368 Alide_3369 Alide_3369 Alide_3369 3519919 3521199 + homoaconitate hydratase family protein KEGG: reu:Reut_B4843 3-isopropylmalate dehydratase large subunit~TIGRFAM: homoaconitate hydratase family protein~PFAM: aconitate hydratase domain-containing protein gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3369 Alide_3370 Alide_3370 Alide_3370 3521196 3521765 + 3-isopropylmalate dehydratase%2C small subunit KEGG: reu:Reut_B4842 3-isopropylmalate dehydratase%2C small subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit~PFAM: aconitate hydratase domain-containing protein gene gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3370 Alide_3371 Alide_3371 Alide_3371 3521762 3522616 + isocitrate lyase and phosphorylmutase PFAM: isocitrate lyase and phosphorylmutase~KEGG: reu:Reut_B4841 2%2C3-dimethylmalate lyase gene gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3371 Alide_3372 Alide_3372 Alide_3372 3522710 3523468 + UbiC transcription regulator-associated domain-containing protein KEGG: reu:Reut_B4840 GntR family transcriptional regulator~PFAM: UbiC transcription regulator-associated domain-containing protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3372 Alide_3373 Alide_3373 Alide_3373 3523518 3523955 - globin PFAM: globin~KEGG: ajs:Ajs_3454 globin gene gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3373 Alide_3374 Alide_3374 Alide_3374 3523955 3524347 - transcriptional regulator%2C TraR/DksA family KEGG: dia:Dtpsy_2782 transcriptional regulator%2C TraR/DksA family gene gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3374 Alide_3375 Alide_3375 Alide_3375 3524391 3525947 - hypothetical protein KEGG: ajs:Ajs_3456 hypothetical protein gene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3375 Alide_3376 Alide_3376 Alide_3376 3526001 3526228 - hypothetical protein KEGG: dia:Dtpsy_2784 hypothetical protein gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3376 Alide_3377 Alide_3377 Alide_3377 3526231 3528762 - protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: dia:Dtpsy_2785 protein of unknown function DUF214 gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3377 Alide_3378 Alide_3378 Alide_3378 3528772 3529638 - formate dehydrogenase subunit FdhD PFAM: formate dehydrogenase subunit FdhD~KEGG: dia:Dtpsy_2786 formate dehydrogenase subunit FdhD gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3378 Alide_3379 Alide_3379 Alide_3379 3529718 3530038 - hypothetical protein KEGG: dia:Dtpsy_2787 hypothetical protein gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3379 Alide_3380 Alide_3380 Alide_3380 3530035 3531231 - formate dehydrogenase%2C gamma subunit TIGRFAM: formate dehydrogenase%2C gamma subunit~KEGG: ajs:Ajs_3461 formate dehydrogenase gamma subunit gene gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3380 Alide_3381 Alide_3381 Alide_3381 3531245 3531478 - putative lipoprotein KEGG: dia:Dtpsy_2789 putative lipoprotein gene gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3381 Alide_3382 Alide_3382 Alide_3382 3531475 3532095 - 4Fe-4S ferredoxin iron-sulfur binding domain protein KEGG: dia:Dtpsy_2790 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3382 Alide_3383 Alide_3383 Alide_3383 3532123 3535095 - molybdopterin oxidoreductase PFAM: molybdopterin oxidoreductase%3B molybdopterin oxidoreductase Fe4S4 region%3B molydopterin dinucleotide-binding region~KEGG: dia:Dtpsy_2791 molybdopterin oxidoreductase gene gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3383 Alide_3384 Alide_3384 Alide_3384 3535117 3535329 - formate dehydrogenase region TAT target TIGRFAM: formate dehydrogenase region TAT target~KEGG: dia:Dtpsy_2792 formate dehydrogenase region TAT target gene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3384 Alide_3385 Alide_3385 Alide_3385 3535465 3536100 - cytoplasmic chaperone TorD family protein KEGG: dia:Dtpsy_2793 cytoplasmic chaperone TorD family protein gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3385 Alide_3386 Alide_3386 Alide_3386 3536097 3538196 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein manually curated~KEGG: ajs:Ajs_3467 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3386 Alide_3387 Alide_3387 Alide_3387 3538120 3538728 - hypothetical protein KEGG: ajs:Ajs_3468 hypothetical protein gene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3387 Alide_3388 Alide_3388 Alide_3388 3538721 3539284 - hypothetical protein KEGG: dia:Dtpsy_2796 hypothetical protein gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3388 Alide_3389 Alide_3389 Alide_3389 3539295 3542156 - formate dehydrogenase%2C alpha subunit KEGG: dia:Dtpsy_2797 formate dehydrogenase%2C alpha subunit~TIGRFAM: formate dehydrogenase%2C alpha subunit~PFAM: molybdopterin oxidoreductase%3B molybdopterin oxidoreductase Fe4S4 region%3B ferredoxin%3B molydopterin dinucleotide-binding region gene gene3439 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3389 Alide_3390 Alide_3390 Alide_3390 3542153 3544054 - Respiratory-chain NADH dehydrogenase domain 51 kDa subunit PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit%3B NADH dehydrogenase (ubiquinone) 24 kDa subunit%3B Soluble ligand binding domain%3B NADH ubiquinone oxidoreductase%2C F subunit%2C iron sulphur binding~KEGG: dia:Dtpsy_2798 respiratory-chain NADH dehydrogenase domain 51 kDa subunit gene gene3440 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3390 Alide_3391 Alide_3391 Alide_3391 3544168 3544974 - HpcH/HpaI aldolase PFAM: HpcH/HpaI aldolase~KEGG: bpy:Bphyt_0618 citrate (pro-3S)-lyase gene gene3441 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3391 Alide_3392 Alide_3392 Alide_3392 3545005 3546207 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: rfr:Rfer_4176 major facilitator transporter gene gene3442 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3392 Alide_3393 Alide_3393 Alide_3393 3546204 3547019 - regulatory protein GntR HTH KEGG: bpt:Bpet0853 GntR family transcriptional regulator~PFAM: regulatory protein GntR HTH%3B UbiC transcription regulator-associated domain-containing protein~SMART: regulatory protein GntR HTH gene gene3443 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3393 Alide_3394 Alide_3394 Alide_3394 3547016 3548245 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: bpt:Bpet0852 hypothetical protein gene gene3444 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3394 Alide_3395 Alide_3395 Alide_3395 3548242 3549414 - Isovaleryl-CoA dehydrogenase KEGG: bpt:Bpet0851 acyl-CoA dehydrogenase~PFAM: acyl-CoA dehydrogenase domain-containing protein gene gene3445 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3395 Alide_3396 Alide_3396 Alide_3396 3549411 3550862 - MmgE/PrpD family protein PFAM: MmgE/PrpD family protein~KEGG: bpt:Bpet0850 hypothetical protein gene gene3446 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3396 Alide_3397 Alide_3397 Alide_3397 3550870 3551850 - hypothetical protein KEGG: vap:Vapar_0801 hypothetical protein gene gene3447 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3397 Alide_3398 Alide_3398 Alide_3398 3551900 3552403 - MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: bpt:Bpet0844 hypothetical protein gene gene3448 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3398 Alide_3399 Alide_3399 Alide_3399 3552589 3553680 - ATPase-like%2C ParA/MinD PFAM: ATPase-like%2C ParA/MinD%3B protein of unknown function DUF59~KEGG: ajs:Ajs_3476 hypothetical protein gene gene3449 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3399 Alide_3400 Alide_3400 Alide_3400 3553747 3554820 - C4-dicarboxylate transporter/malic acid transport protein PFAM: C4-dicarboxylate transporter/malic acid transport protein~KEGG: dia:Dtpsy_2801 C4-dicarboxylate transporter/malic acid transport protein gene gene3450 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3400 Alide_3401 Alide_3401 Alide_3401 3554817 3555878 - selenide%2C water dikinase KEGG: ajs:Ajs_3479 selenophosphate synthase~TIGRFAM: selenide%2C water dikinase~PFAM: AIR synthase related protein%3B AIR synthase related protein domain protein gene gene3451 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3401 Alide_3402 Alide_3402 Alide_3402 3555937 3556986 + tRNA 2-selenouridine synthase KEGG: dia:Dtpsy_2803 tRNA 2-selenouridine synthase~TIGRFAM: tRNA 2-selenouridine synthase~SMART: Rhodanese domain protein gene gene3452 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3402 Alide_3403 Alide_3403 Alide_3403 3557173 3557748 + restriction endonuclease PFAM: restriction endonuclease~KEGG: dia:Dtpsy_2804 restriction endonuclease gene gene3453 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3403 Alide_3404 Alide_3404 Alide_3404 3557773 3559014 + Patatin PFAM: Patatin~KEGG: dia:Dtpsy_2805 patatin gene gene3454 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3404 Alide_3405 Alide_3405 Alide_3405 3559094 3561163 + methionyl-tRNA synthetase KEGG: dia:Dtpsy_2806 methionyl-tRNA synthetase~TIGRFAM: methionyl-tRNA synthetase%3B methionyl-tRNA synthetase%2C beta subunit~PFAM: tRNA synthetase class I (M)%3B t-RNA-binding domain-containing protein gene gene3455 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3405 Alide_3406 Alide_3406 Alide_3406 3561180 3561407 + hypothetical protein KEGG: dac:Daci_1842 hypothetical protein gene gene3456 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3406 Alide_3407 Alide_3407 Alide_3407 3561581 3563053 - regulatory protein GntR HTH KEGG: tmz:Tmz1t_0986 transcriptional regulator%2C GntR family with aminotransferase domain~PFAM: regulatory protein GntR HTH%3B aminotransferase class I and II~SMART: regulatory protein GntR HTH gene gene3457 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3407 Alide_3408 Alide_3408 Alide_3408 3563143 3564360 + benzoate transporter KEGG: dac:Daci_3710 benzoate transporter~TIGRFAM: benzoate transporter~PFAM: Benzoate membrane transport protein gene gene3458 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3408 Alide_3409 Alide_3409 Alide_3409 3564357 3565151 + alanine racemase domain protein PFAM: alanine racemase domain protein~KEGG: dac:Daci_3709 alanine racemase domain-containing protein gene gene3459 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3409 Alide_3410 Alide_3410 Alide_3410 3565148 3565864 + glutamine amidotransferase class-I PFAM: glutamine amidotransferase class-I~KEGG: tmz:Tmz1t_0983 glutamine amidotransferase gene gene3460 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3410 Alide_3411 Alide_3411 Alide_3411 3565950 3566957 - helix-turn-helix- domain containing protein AraC type KEGG: ajs:Ajs_3485 AraC family transcriptional regulator~PFAM: helix-turn-helix- domain containing protein AraC type%3B helix-turn-helix Fis-type~SMART: Helix-turn-helix%2C AraC domain gene gene3461 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3411 Alide_3412 Alide_3412 Alide_3412 3567052 3568662 + fumarate reductase/succinate dehydrogenase flavoprotein domain protein PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein~KEGG: dia:Dtpsy_2809 fumarate reductase/succinate dehydrogenase flavoprotein domain protein gene gene3462 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3412 Alide_3413 Alide_3413 Alide_3413 3568659 3569810 + FMN-dependent alpha-hydroxy acid dehydrogenase PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase~KEGG: ajs:Ajs_3487 FMN-dependent alpha-hydroxy acid dehydrogenase gene gene3463 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3413 Alide_3414 Alide_3414 Alide_3414 3569879 3571531 + thiamine pyrophosphate TPP-binding domain-containing protein PFAM: thiamine pyrophosphate TPP-binding domain-containing protein~KEGG: ajs:Ajs_3488 hypothetical protein gene gene3464 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3414 Alide_3415 Alide_3415 Alide_3415 3571538 3572038 - putative lipoprotein KEGG: dac:Daci_1840 putative lipoprotein gene gene3465 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3415 Alide_3416 Alide_3416 Alide_3416 3572084 3572299 + hypothetical protein KEGG: ajs:Ajs_3491 hypothetical protein gene gene3466 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3416 Alide_3417 Alide_3417 Alide_3417 3572365 3573201 + chromosome segregation and condensation protein ScpA PFAM: chromosome segregation and condensation protein ScpA~KEGG: ajs:Ajs_3492 condensin subunit ScpA gene gene3467 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3417 Alide_3418 Alide_3418 Alide_3418 3573186 3573740 - uncharacterized peroxidase-related enzyme KEGG: sml:Smlt2675 putative carboxymuconolactone decarboxylase family protein~TIGRFAM: uncharacterized peroxidase-related enzyme%3B alkylhydroperoxidase like protein%2C AhpD family~PFAM: Carboxymuconolactone decarboxylase gene gene3468 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3418 Alide_3419 Alide_3419 Alide_3419 3573836 3574705 + helix-turn-helix- domain containing protein AraC type KEGG: reh:H16_A1911 AraC family transcriptional regulator~PFAM: helix-turn-helix- domain containing protein AraC type~SMART: Helix-turn-helix%2C AraC domain gene gene3469 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3419 Alide_3420 Alide_3420 Alide_3420 3574797 3576371 + L-aspartate oxidase KEGG: vei:Veis_1080 L-aspartate oxidase~TIGRFAM: L-aspartate oxidase~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein gene gene3470 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3420 Alide_3421 Alide_3421 Alide_3421 3576419 3576781 + 5-carboxymethyl-2-hydroxymuconate isomerase PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase~KEGG: dia:Dtpsy_2818 5-carboxymethyl-2-hydroxymuconate isomerase gene gene3471 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3421 Alide_3422 Alide_3422 Alide_3422 3576919 3578661 - para-aminobenzoate synthase%2C subunit I KEGG: ajs:Ajs_3496 para-aminobenzoate synthase%2C subunit I~TIGRFAM: para-aminobenzoate synthase%2C subunit I~PFAM: Chorismate binding-like%3B aminotransferase class IV gene gene3472 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3422 Alide_3423 Alide_3423 Alide_3423 3578715 3579839 - quinolinate synthetase complex%2C A subunit TIGRFAM: quinolinate synthetase complex%2C A subunit~KEGG: dia:Dtpsy_2820 quinolinate synthetase~PFAM: Quinolinate synthetase A gene gene3473 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3423 Alide_3424 Alide_3424 Alide_3424 3580061 3580942 - nicotinate-nucleotide pyrophosphorylase TIGRFAM: nicotinate-nucleotide pyrophosphorylase~KEGG: dia:Dtpsy_2821 nicotinate-nucleotide pyrophosphorylase~PFAM: Quinolinate phosphoribosyl transferase gene gene3474 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3424 Alide_3425 Alide_3425 Alide_3425 3581000 3581125 + pseudogene gene3475 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3425 Alide_3426 Alide_3426 Alide_3426 3581261 3582145 + 3-methyl-2-oxobutanoate hydroxymethyltransferase TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase~KEGG: dia:Dtpsy_2822 3-methyl-2-oxobutanoate hydroxymethyltransferase~PFAM: Ketopantoate hydroxymethyltransferase gene gene3476 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3426 Alide_3427 Alide_3427 Alide_3427 3582157 3583008 + pantoate/beta-alanine ligase KEGG: ajs:Ajs_3500 pantoate--beta-alanine ligase~TIGRFAM: pantoate/beta-alanine ligase~PFAM: Pantoate-beta-alanine ligase gene gene3477 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3427 Alide_3428 Alide_3428 Alide_3428 3583128 3584018 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: bbr:BB0990 LysR family transcriptional regulator gene gene3478 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3428 Alide_3429 Alide_3429 Alide_3429 3584135 3585127 + hypothetical protein KEGG: bpa:BPP0896 hypothetical protein gene gene3479 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3429 Alide_3430 Alide_3430 Alide_3430 3585136 3586662 + Microcystin LR degradation protein MlrC-like protein PFAM: Microcystin LR degradation protein MlrC-like%3B MlrC domain protein~KEGG: bbr:BB0988 hypothetical protein gene gene3480 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3430 Alide_3431 Alide_3431 Alide_3431 3586677 3587414 + protein of unknown function DUF81 PFAM: protein of unknown function DUF81~KEGG: bpa:BPP0894 hypothetical protein gene gene3481 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3431 Alide_3432 Alide_3432 Alide_3432 3587446 3588429 + hypothetical protein KEGG: bpa:BPP0893 hypothetical protein gene gene3482 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3432 Alide_3433 Alide_3433 Alide_3433 3588457 3589179 - hypothetical protein KEGG: pna:Pnap_3576 hypothetical protein gene gene3483 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3433 Alide_3434 Alide_3434 Alide_3434 3589297 3590289 - NAD-dependent glycerol-3-phosphate dehydrogenase domain protein KEGG: ajs:Ajs_3501 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase~manually curated~PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein gene gene3484 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3434 Alide_3435 Alide_3435 Alide_3435 3590355 3590810 - protein-export protein SecB KEGG: dia:Dtpsy_2825 preprotein translocase subunit SecB~TIGRFAM: protein-export protein SecB~PFAM: protein export chaperone SecB gene gene3485 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3435 Alide_3436 Alide_3436 Alide_3436 3590918 3591175 - glutaredoxin 3 KEGG: dia:Dtpsy_2826 glutaredoxin 3~TIGRFAM: glutaredoxin 3~PFAM: glutaredoxin gene gene3486 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3436 Alide_3437 Alide_3437 Alide_3437 3591224 3591631 - Rhodanese domain protein KEGG: dia:Dtpsy_2827 rhodanese domain protein~PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein gene gene3487 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3437 Alide_3438 Alide_3438 Alide_3438 3591705 3592448 + phosphoglycerate mutase 1 family TIGRFAM: phosphoglycerate mutase 1 family~KEGG: ajs:Ajs_3505 phosphoglyceromutase~PFAM: Phosphoglycerate mutase gene gene3488 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3438 Alide_3439 Alide_3439 Alide_3439 3592535 3593971 + carboxyl-terminal protease TIGRFAM: carboxyl-terminal protease~PFAM: peptidase S41%3B PDZ/DHR/GLGF domain protein~KEGG: ajs:Ajs_3506 C-terminal processing peptidase-3~SMART: peptidase S41%3B PDZ/DHR/GLGF domain protein gene gene3489 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3439 Alide_3440 Alide_3440 Alide_3440 3594039 3594803 + UBA/THIF-type NAD/FAD binding protein PFAM: UBA/THIF-type NAD/FAD binding protein%3B MoeZ/MoeB domain protein~KEGG: ajs:Ajs_3507 UBA/ThiF-type NAD/FAD binding protein gene gene3490 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3440 Alide_3441 Alide_3441 Alide_3441 3594909 3595328 + response regulator receiver KEGG: dia:Dtpsy_2831 response regulator receiver protein~PFAM: response regulator receiver~SMART: response regulator receiver gene gene3491 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3441 Alide_3442 Alide_3442 Alide_3442 3595306 3595938 - response regulator receiver KEGG: dia:Dtpsy_2832 two component transcriptional regulator%2C LuxR family~PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR gene gene3492 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3442 Alide_3443 Alide_3443 Alide_3443 3596048 3597391 + CHASE3 domain protein KEGG: ajs:Ajs_3510 multi-sensor signal transduction histidine kinase~PFAM: CHASE3 domain protein%3B histidine kinase dimerisation and phosphoacceptor region%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein gene gene3493 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3443 Alide_3444 Alide_3444 Alide_3444 3597534 3597698 + protein of unknown function DUF1328 PFAM: protein of unknown function DUF1328~KEGG: dia:Dtpsy_2834 hypothetical protein gene gene3494 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3444 Alide_3445 Alide_3445 Alide_3445 3597764 3598156 + protein of unknown function DUF883 ElaB PFAM: protein of unknown function DUF883 ElaB~KEGG: dia:Dtpsy_2835 hypothetical protein gene gene3495 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3445 Alide_3446 Alide_3446 Alide_3446 3598295 3598609 + transport-associated protein KEGG: dia:Dtpsy_2837 transport-associated~PFAM: transport-associated~SMART: Transport-associated and nodulation region gene gene3496 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3446 Alide_3447 Alide_3447 Alide_3447 3598765 3599253 - pantetheine-phosphate adenylyltransferase TIGRFAM: pantetheine-phosphate adenylyltransferase%3B cytidyltransferase-related domain protein~KEGG: dia:Dtpsy_2839 phosphopantetheine adenylyltransferase~PFAM: cytidylyltransferase gene gene3497 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3447 Alide_3448 Alide_3448 Alide_3448 3599381 3599971 - methyltransferase TIGRFAM: methyltransferase~KEGG: dia:Dtpsy_2840 methyltransferase~PFAM: Conserved hypothetical protein CHP00095 gene gene3498 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3448 Alide_3449 Alide_3449 Alide_3449 3599968 3601326 - peptidase M16 domain protein KEGG: dia:Dtpsy_2841 peptidase M16 domain protein~manually curated~PFAM: peptidase M16 domain protein gene gene3499 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3449 Alide_3450 Alide_3450 Alide_3450 3601340 3602770 - peptidase M16 domain protein PFAM: peptidase M16 domain protein~KEGG: dia:Dtpsy_2842 peptidase M16 domain protein gene gene3500 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3450 Alide_3451 Alide_3451 Alide_3451 3602800 3603924 + signal recognition particle-docking protein FtsY TIGRFAM: signal recognition particle-docking protein FtsY~PFAM: GTP-binding signal recognition particle SRP54 G- domain%3B GTP-binding signal recognition particle SRP54 helical bundle~KEGG: dia:Dtpsy_2843 signal recognition particle-docking protein FtsY~SMART: AAA ATPase gene gene3501 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3451 Alide_3452 Alide_3452 Alide_3452 3603938 3604891 - regulatory protein LysR PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: aav:Aave_1392 LysR family transcriptional regulator gene gene3502 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3452 Alide_3453 Alide_3453 Alide_3453 3605010 3605948 + dihydrodipicolinate synthetase PFAM: dihydrodipicolinate synthetase~KEGG: dac:Daci_3342 dihydrodipicolinate synthetase gene gene3503 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3453 Alide_3454 Alide_3454 Alide_3454 3605980 3606945 + hypothetical protein KEGG: dac:Daci_3341 hypothetical protein gene gene3504 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3454 Alide_3455 Alide_3455 Alide_3455 3606935 3607639 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: vap:Vapar_5678 short-chain dehydrogenase/reductase SDR gene gene3505 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3455 Alide_3456 Alide_3456 Alide_3456 3607665 3608831 + Mandelate racemase/muconate lactonizing protein PFAM: Mandelate racemase/muconate lactonizing protein~KEGG: dac:Daci_3339 mandelate racemase/muconate lactonizing protein gene gene3506 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3456 Alide_3457 Alide_3457 Alide_3457 3608846 3609202 - CutA1 divalent ion tolerance protein PFAM: CutA1 divalent ion tolerance protein~KEGG: dia:Dtpsy_2844 CutA1 divalent ion tolerance protein gene gene3507 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3457 Alide_3458 Alide_3458 Alide_3458 3609317 3610306 - hypothetical protein KEGG: dac:Daci_4557 hypothetical protein gene gene3508 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3458 Alide_3459 Alide_3459 Alide_3459 3610361 3611332 - hypothetical protein KEGG: vap:Vapar_6186 hypothetical protein gene gene3509 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3459 Alide_3460 Alide_3460 Alide_3460 3611418 3614063 + aconitate hydratase domain-containing protein PFAM: aconitate hydratase domain-containing protein~KEGG: dac:Daci_4555 aconitate hydratase gene gene3510 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3460 Alide_3461 Alide_3461 Alide_3461 3614074 3615015 + GntR domain protein KEGG: dac:Daci_4554 GntR family transcriptional regulator~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene3511 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3461 Alide_3462 Alide_3462 Alide_3462 3615028 3615765 + extracellular solute-binding protein family 3 KEGG: dac:Daci_4553 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3 gene gene3512 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3462 Alide_3463 Alide_3463 Alide_3463 3615762 3616844 + putative hemagglutinin-related protein KEGG: dac:Daci_4552 putative hemagglutinin-related protein gene gene3513 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3463 Alide_3464 Alide_3464 Alide_3464 3616847 3617914 - Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: rpa:RPA3655 alcohol dehydrogenase gene gene3514 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3464 Alide_3465 Alide_3465 Alide_3465 3618081 3618767 - hydratase/decarboxylase KEGG: pol:Bpro_1513 hydratase/decarboxylase gene gene3515 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3465 Alide_3466 Alide_3466 Alide_3466 3619314 3619979 + response regulator receiver KEGG: dac:Daci_2714 two component transcriptional regulator~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene3516 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3466 Alide_3467 Alide_3467 Alide_3467 3619983 3621380 + histidine kinase A domain protein manually curated~PFAM: histidine kinase A domain protein%3B ATP-binding region ATPase domain protein~KEGG: dac:Daci_2713 histidine kinase~SMART: histidine kinase A domain protein%3B ATP-binding region ATPase domain protein gene gene3517 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3467 Alide_3468 Alide_3468 Alide_3468 3621383 3622078 - protein of unknown function DUF125 transmembrane PFAM: protein of unknown function DUF125 transmembrane~KEGG: dac:Daci_2712 hypothetical protein gene gene3518 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3468 Alide_3469 Alide_3469 Alide_3469 3622104 3622661 - cytochrome b561 manually curated~KEGG: dac:Daci_2711 cytochrome b561 gene gene3519 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3469 Alide_3470 Alide_3470 Alide_3470 3623015 3624064 + efflux transporter%2C RND family%2C MFP subunit KEGG: dac:Daci_2710 RND family efflux transporter MFP subunit~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein gene gene3520 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3470 Alide_3471 Alide_3471 Alide_3471 3624075 3627167 + heavy metal efflux pump%2C CzcA family KEGG: dac:Daci_2709 CzcA family heavy metal efflux protein~TIGRFAM: heavy metal efflux pump%2C CzcA family~PFAM: acriflavin resistance protein gene gene3521 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3471 Alide_3472 Alide_3472 Alide_3472 3627164 3627505 + hypothetical protein KEGG: dac:Daci_2708 hypothetical protein gene gene3522 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3472 Alide_3473 Alide_3473 Alide_3473 3627502 3628764 + outer membrane efflux protein KEGG: dac:Daci_2707 outer membrane efflux protein gene gene3523 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3473 Alide_3474 Alide_3474 Alide_3474 3629018 3629800 - hypothetical protein KEGG: dba:Dbac_1405 ABC transporter related gene gene3524 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3474 Alide_3475 Alide_3475 Alide_3475 3630179 3631114 + RNA polymerase sigma factor RpoH KEGG: dia:Dtpsy_2845 RNA polymerase%2C sigma 32 subunit%2C RpoH~TIGRFAM: RNA polymerase sigma factor RpoH%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein gene gene3525 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3475 Alide_3476 Alide_3476 Alide_3476 3631257 3632267 + hypothetical protein KEGG: dia:Dtpsy_2846 hypothetical protein gene gene3526 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3476 Alide_3477 Alide_3477 Alide_3477 3632301 3632864 - electron transport protein SCO1/SenC PFAM: electron transport protein SCO1/SenC~KEGG: dia:Dtpsy_2849 electron transport protein SCO1/SenC gene gene3527 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3477 Alide_3478 Alide_3478 Alide_3478 3632922 3633848 - protoheme IX farnesyltransferase KEGG: dia:Dtpsy_2850 protoheme IX farnesyltransferase~TIGRFAM: protoheme IX farnesyltransferase~PFAM: UbiA prenyltransferase gene gene3528 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3478 Alide_3479 Alide_3479 Alide_3479 3633845 3635002 - cytochrome oxidase assembly PFAM: cytochrome oxidase assembly~KEGG: ajs:Ajs_3528 cytochrome oxidase assembly gene gene3529 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3479 Alide_3480 Alide_3480 Alide_3480 3634999 3635754 - hypothetical protein KEGG: ajs:Ajs_3529 hypothetical protein gene gene3530 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3480 Alide_3481 Alide_3481 Alide_3481 3635696 3636463 - putative transmembrane cytochrome oxidase KEGG: dia:Dtpsy_2853 putative transmembrane cytochrome oxidase gene gene3531 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3481 Alide_3482 Alide_3482 Alide_3482 3636470 3636703 + putative transmembrane protein KEGG: ajs:Ajs_3531 putative transmembrane protein gene gene3532 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3482 Alide_3483 Alide_3483 Alide_3483 3636777 3637661 - cytochrome c oxidase subunit III PFAM: cytochrome c oxidase subunit III~KEGG: dia:Dtpsy_2855 cytochrome c oxidase subunit III gene gene3533 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3483 Alide_3484 Alide_3484 Alide_3484 3637721 3637933 - hypothetical protein KEGG: dia:Dtpsy_2856 hypothetical protein gene gene3534 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3484 Alide_3485 Alide_3485 Alide_3485 3637933 3638556 - cytochrome c oxidase assembly protein CtaG/Cox11 PFAM: cytochrome c oxidase assembly protein CtaG/Cox11~KEGG: dia:Dtpsy_2857 cytochrome c oxidase assembly protein gene gene3535 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3485 Alide_3486 Alide_3486 Alide_3486 3638572 3638688 - hypothetical protein KEGG: vap:Vapar_4390 hypothetical protein gene gene3536 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3486 Alide_3487 Alide_3487 Alide_3487 3638706 3640337 - cytochrome c oxidase%2C subunit I KEGG: ajs:Ajs_3536 cytochrome-c oxidase~TIGRFAM: cytochrome c oxidase%2C subunit I~PFAM: cytochrome c oxidase subunit I gene gene3537 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3487 Alide_3488 Alide_3488 Alide_3488 3640375 3641538 - cytochrome c oxidase%2C subunit II KEGG: dia:Dtpsy_2860 cytochrome c oxidase%2C subunit II~TIGRFAM: cytochrome c oxidase%2C subunit II~PFAM: cytochrome c oxidase subunit II%3B cytochrome C oxidase subunit II transmembrane region%3B cytochrome c class I gene gene3538 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3488 Alide_3489 Alide_3489 Alide_3489 3641990 3642898 - biotin synthesis protein BioC KEGG: ajs:Ajs_3539 biotin synthesis protein BioC gene gene3539 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3489 Alide_3490 Alide_3490 Alide_3490 3642934 3643671 + phosphoribosyltransferase PFAM: phosphoribosyltransferase~KEGG: ajs:Ajs_3540 ComF family protein gene gene3540 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3490 Alide_3491 Alide_3491 Alide_3491 3643726 3644202 + tRNA/rRNA methyltransferase (SpoU) PFAM: tRNA/rRNA methyltransferase (SpoU)~KEGG: dia:Dtpsy_2864 tRNA/rRNA methyltransferase (SpoU) gene gene3541 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3491 Alide_3492 Alide_3492 Alide_3492 3644199 3645122 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: aav:Aave_3911 LysR family transcriptional regulator gene gene3542 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3492 Alide_3493 Alide_3493 Alide_3493 3645349 3645672 + hypothetical protein KEGG: aav:Aave_3912 hypothetical protein gene gene3543 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3493 Alide_3494 Alide_3494 Alide_3494 3645752 3646372 - cobyrinic acid ac-diamide synthase KEGG: dia:Dtpsy_2866 cobyrinic acid ac-diamide synthase gene gene3544 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3494 Alide_3495 Alide_3495 Alide_3495 3646452 3647090 - Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: ajs:Ajs_3544 lysine exporter protein LysE/YggA gene gene3545 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3495 Alide_3496 Alide_3496 Alide_3496 3647209 3649059 + potassium efflux system protein KEGG: dia:Dtpsy_2868 glutathione-regulated potassium-efflux system protein KefC~TIGRFAM: potassium efflux system protein~PFAM: sodium/hydrogen exchanger%3B TrkA-N domain protein gene gene3546 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3496 Alide_3497 Alide_3497 Alide_3497 3649114 3649908 - UbiC transcription regulator-associated domain-containing protein KEGG: mav:MAV_1744 transcriptional regulator%2C GntR family protein~PFAM: UbiC transcription regulator-associated domain-containing protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene3547 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3497 Alide_3498 Alide_3498 Alide_3498 3650072 3650935 + isocitrate lyase and phosphorylmutase PFAM: isocitrate lyase and phosphorylmutase~KEGG: cak:Caul_0509 carboxyvinyl-carboxyphosphonate phosphorylmutase gene gene3548 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3498 Alide_3499 Alide_3499 Alide_3499 3650943 3652352 + 3-isopropylmalate dehydratase%2C large subunit KEGG: bja:bll0416 isopropylmalate isomerase large subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C large subunit~PFAM: aconitate hydratase domain-containing protein gene gene3549 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3499 Alide_3500 Alide_3500 Alide_3500 3652355 3652987 + 3-isopropylmalate dehydratase%2C small subunit KEGG: cak:Caul_0508 isopropylmalate isomerase small subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit~PFAM: aconitate hydratase domain-containing protein gene gene3550 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3500 Alide_3501 Alide_3501 Alide_3501 3653010 3654011 + hypothetical protein KEGG: pol:Bpro_2294 hypothetical protein gene gene3551 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3501 Alide_3502 Alide_3502 Alide_3502 3654023 3655201 + protein of unknown function DUF453 PFAM: protein of unknown function DUF453~KEGG: cak:Caul_0497 hypothetical protein gene gene3552 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3502 Alide_3503 Alide_3503 Alide_3503 3655206 3656639 + MmgE/PrpD family protein PFAM: MmgE/PrpD family protein~KEGG: vei:Veis_4268 MmgE/PrpD family protein gene gene3553 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3503 Alide_3504 Alide_3504 Alide_3504 3656636 3657595 + hypothetical protein KEGG: vap:Vapar_4085 hypothetical protein gene gene3554 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3504 Alide_3505 Alide_3505 Alide_3505 3657622 3658617 + hypothetical protein KEGG: vap:Vapar_4972 hypothetical protein gene gene3555 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3505 Alide_3506 Alide_3506 Alide_3506 3658731 3659918 - amidohydrolase TIGRFAM: amidohydrolase~KEGG: bph:Bphy_3769 amidohydrolase~PFAM: peptidase M20 gene gene3556 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3506 Alide_3507 Alide_3507 Alide_3507 3659932 3660561 - putative secreted protein KEGG: bpt:Bpet0051 putative secreted protein gene gene3557 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3507 Alide_3508 Alide_3508 Alide_3508 3660606 3661430 + LysR substrate-binding protein PFAM: LysR substrate-binding~KEGG: rec:RHECIAT_CH0001484 putative transcriptional regulator protein%2C LysR family gene gene3558 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3508 Alide_3509 Alide_3509 Alide_3509 3661478 3661639 + pseudogene gene3559 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3509 Alide_3510 Alide_3510 Alide_3510 3661812 3662804 - hypothetical protein KEGG: dia:Dtpsy_2869 hypothetical protein gene gene3560 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3510 Alide_3511 Alide_3511 Alide_3511 3662849 3663574 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: aav:Aave_3940 short-chain dehydrogenase/reductase SDR gene gene3561 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3511 Alide_3512 Alide_3512 Alide_3512 3663636 3664838 - beta-ketoadipyl CoA thiolase TIGRFAM: beta-ketoadipyl CoA thiolase%3B acetyl-CoA acetyltransferase~KEGG: dac:Daci_5563 beta-ketoadipyl CoA thiolase~PFAM: Thiolase-like gene gene3562 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3512 Alide_3513 Alide_3513 Alide_3513 3664916 3665560 - 3-oxoacid CoA-transferase%2C B subunit TIGRFAM: 3-oxoacid CoA-transferase%2C B subunit~KEGG: dia:Dtpsy_2872 3-oxoacid CoA-transferase%2C B subunit~PFAM: coenzyme A transferase gene gene3563 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3513 Alide_3514 Alide_3514 Alide_3514 3665583 3666278 - 3-oxoacid CoA-transferase%2C A subunit TIGRFAM: 3-oxoacid CoA-transferase%2C A subunit~KEGG: dia:Dtpsy_2873 3-oxoacid CoA-transferase%2C A subunit~PFAM: coenzyme A transferase gene gene3564 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3514 Alide_3515 Alide_3515 Alide_3515 3666381 3667184 + beta-ketoadipate pathway transcriptional regulator%2C PcaR/PcaU/PobR family TIGRFAM: beta-ketoadipate pathway transcriptional regulators%2C PcaR/PcaU/PobR family~PFAM: Transcriptional regulator IclR %3B regulatory protein IclR~KEGG: dia:Dtpsy_2874 transcriptional regulator%2C IclR family~SMART: regulatory protein IclR gene gene3565 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3515 Alide_3516 Alide_3516 Alide_3516 3667195 3667629 + Domain of unknown function DUF1841 PFAM: Domain of unknown function DUF1841~KEGG: ajs:Ajs_3553 hypothetical protein gene gene3566 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3516 Alide_3517 Alide_3517 Alide_3517 3667564 3668445 - UspA domain-containing protein PFAM: UspA domain-containing protein~KEGG: ajs:Ajs_3554 UspA domain-containing protein gene gene3567 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3517 Alide_3518 Alide_3518 Alide_3518 3668892 3669551 - cytochrome c class I PFAM: cytochrome c class I~KEGG: dia:Dtpsy_2878 cytochrome c class I gene gene3568 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3518 Alide_3519 Alide_3519 Alide_3519 3669672 3670514 + ATPase associated with various cellular activities AAA_5 KEGG: ajs:Ajs_3556 ATPase central domain-containing protein~PFAM: ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase gene gene3569 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3519 Alide_3520 Alide_3520 Alide_3520 3670526 3671125 + GCN5-related N-acetyltransferase KEGG: dia:Dtpsy_2881 GCN5-related N-acetyltransferase gene gene3570 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3520 Alide_3521 Alide_3521 Alide_3521 3671141 3672154 - hypothetical protein KEGG: cti:RALTA_B1738 conserved hypothetical protein%3B UPF0065 gene gene3571 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3521 Alide_3522 Alide_3522 Alide_3522 3672415 3673194 + regulatory protein GntR HTH KEGG: bpy:Bphyt_0617 transcriptional regulator%2C GntR family~PFAM: regulatory protein GntR HTH%3B UbiC transcription regulator-associated domain-containing protein~SMART: regulatory protein GntR HTH gene gene3572 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3522 Alide_3523 Alide_3523 Alide_3523 3673202 3674398 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: sti:Sthe_3003 formyl-CoA transferase gene gene3573 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3523 Alide_3524 Alide_3524 Alide_3524 3674415 3675575 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: sti:Sthe_1794 acyl-CoA dehydrogenase domain protein gene gene3574 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3524 Alide_3525 Alide_3525 Alide_3525 3675588 3676370 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: pzu:PHZ_c3022 enoyl-CoA hydratase/isomerase family protein gene gene3575 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3525 Alide_3526 Alide_3526 Alide_3526 3676355 3677704 + MmgE/PrpD family protein PFAM: MmgE/PrpD family protein~KEGG: nmg:Nmag_3457 MmgE/PrpD family protein gene gene3576 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3526 Alide_3527 Alide_3527 Alide_3527 3677779 3678966 + hypothetical protein KEGG: ajs:Ajs_3559 hypothetical protein gene gene3577 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3527 Alide_3528 Alide_3528 Alide_3528 3678971 3680866 + surface antigen (D15) PFAM: surface antigen (D15)~KEGG: dia:Dtpsy_2883 surface antigen (D15) gene gene3578 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3528 Alide_3529 Alide_3529 Alide_3529 3680972 3685060 + protein of unknown function DUF490 PFAM: protein of unknown function DUF490~KEGG: ajs:Ajs_3561 hypothetical protein gene gene3579 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3529 Alide_3530 Alide_3530 Alide_3530 3685294 3686262 - hypothetical protein KEGG: sdn:Sden_0296 hypothetical protein gene gene3580 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3530 Alide_3531 Alide_3531 Alide_3531 3686532 3686756 - hypothetical protein KEGG: sbi:SORBI_03g042340 hypothetical protein gene gene3581 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3531 Alide_3532 Alide_3532 Alide_3532 3686847 3687038 - hypothetical protein KEGG: rpf:Rpic12D_4805 hypothetical protein gene gene3582 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3532 Alide_3533 Alide_3533 Alide_3533 3687035 3687436 - hypothetical protein KEGG: vei:Veis_3760 hypothetical protein gene gene3583 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3533 Alide_3534 Alide_3534 Alide_3534 3687429 3687737 - excinuclease ABC subunit C KEGG: dhd:Dhaf_3041 excinuclease ABC subunit C gene gene3584 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3534 Alide_3535 Alide_3535 Alide_3535 3687857 3689104 - hypothetical protein KEGG: dac:Daci_3452 putative lysozyme gene gene3585 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3535 Alide_3536 Alide_3536 Alide_3536 3689109 3689447 - hypothetical protein KEGG: ana:all0634 hypothetical protein gene gene3586 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3536 Alide_3537 Alide_3537 Alide_3537 3689490 3690398 - hypothetical protein KEGG: mav:MAV_0791 hypothetical protein gene gene3587 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3537 Alide_3538 Alide_3538 Alide_3538 3690395 3691843 - hypothetical protein KEGG: cel:Y25C1A.3 C-type LECtin gene gene3588 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3538 Alide_3539 Alide_3539 Alide_3539 3691853 3694126 - hypothetical protein KEGG: nml:Namu_4228 conserved repeat domain protein gene gene3589 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3539 Alide_3540 Alide_3540 Alide_3540 3694328 3694780 - hypothetical protein KEGG: cph:Cpha266_1609 hypothetical protein gene gene3590 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3540 Alide_3541 Alide_3541 Alide_3541 3694972 3696600 - hypothetical protein KEGG: nmg:Nmag_3292 Cna B domain protein gene gene3591 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3541 Alide_3542 Alide_3542 Alide_3542 3696597 3699761 - hypothetical protein KEGG: cre:CHLREDRAFT_167270 hypothetical protein gene gene3592 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3542 Alide_3543 Alide_3543 Alide_3543 3699776 3702571 - phage tail tape measure protein%2C TP901 family KEGG: pna:Pnap_2248 TP901 family phage tail tape measure protein~TIGRFAM: phage tail tape measure protein%2C TP901 family~PFAM: tail tape measure protein TP901 core region gene gene3593 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3543 Alide_3544 Alide_3544 Alide_3544 3702647 3703438 - hypothetical protein KEGG: hth:HTH_0895 hypothetical protein gene gene3594 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3544 Alide_3545 Alide_3545 Alide_3545 3703474 3703875 - hypothetical protein KEGG: pna:Pnap_2250 hypothetical protein gene gene3595 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3545 Alide_3546 Alide_3546 Alide_3546 3703888 3704226 - hypothetical protein KEGG: pna:Pnap_2251 hypothetical protein gene gene3596 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3546 Alide_3547 Alide_3547 Alide_3547 3704229 3705242 - phage protein GP20 KEGG: mes:Meso_1217 phage protein GP20 gene gene3597 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3547 Alide_3548 Alide_3548 Alide_3548 3705270 3705656 - hypothetical phage-related protein KEGG: xal:XALc_0211 hypothetical phage-related protein gene gene3598 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3548 Alide_3549 Alide_3549 Alide_3549 3705668 3707023 - peptidase S49 PFAM: peptidase S49~KEGG: met:M446_4143 peptidase S49 gene gene3599 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3549 Alide_3550 Alide_3550 Alide_3550 3707020 3708636 - phage portal protein%2C lambda family KEGG: lhk:LHK_01658 phage portal protein%2C lambda family~TIGRFAM: phage portal protein%2C lambda family~PFAM: portal protein lambda gene gene3600 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3550 Alide_3551 Alide_3551 Alide_3551 3708640 3708867 - hypothetical protein KEGG: sus:Acid_3400 hypothetical protein gene gene3601 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3551 Alide_3552 Alide_3552 Alide_3552 3708922 3709239 - hypothetical protein KEGG: hmg:100211620 similar to H28G03.4 gene gene3602 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3552 Alide_3553 Alide_3553 Alide_3553 3709236 3711296 - terminase GpA PFAM: terminase GpA~KEGG: dac:Daci_4687 terminase GpA gene gene3603 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3553 Alide_3554 Alide_3554 Alide_3554 3711293 3712042 - DNA packaging Nu1 PFAM: DNA packaging Nu1~KEGG: dac:Daci_4688 hypothetical protein gene gene3604 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3554 Alide_3555 Alide_3555 Alide_3555 3712175 3712273 - hypothetical protein gene gene3605 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3555 Alide_3556 Alide_3556 Alide_3556 3712270 3712599 - hypothetical protein KEGG: bph:Bphy_1886 hypothetical protein gene gene3606 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3556 Alide_3557 Alide_3557 Alide_3557 3712596 3713240 - hypothetical protein KEGG: bpt:Bpet0970 hypothetical protein gene gene3607 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3557 Alide_3558 Alide_3558 Alide_3558 3713188 3714198 - hypothetical protein KEGG: apt:APA01_05090 hypothetical protein gene gene3608 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3558 Alide_3559 Alide_3559 Alide_3559 3714202 3714957 - hypothetical protein KEGG: bvu:BVU_2841 hypothetical protein gene gene3609 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3559 Alide_3560 Alide_3560 Alide_3560 3714954 3715646 - ParB domain protein nuclease KEGG: hiq:CGSHiGG_04860 hypothetical protein~PFAM: ParB domain protein nuclease~SMART: ParB domain protein nuclease gene gene3610 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3560 Alide_3561 Alide_3561 Alide_3561 3715665 3716351 - hypothetical protein KEGG: aav:Aave_1760 hypothetical protein gene gene3611 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3561 Alide_3562 Alide_3562 Alide_3562 3716354 3717178 - hypothetical protein KEGG: pna:Pnap_2259 hypothetical protein gene gene3612 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3562 Alide_3563 Alide_3563 Alide_3563 3717220 3717366 - pseudogene gene3613 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3563 Alide_3564 Alide_3564 Alide_3564 3717366 3717914 - hypothetical protein KEGG: pna:Pnap_2262 hypothetical protein gene gene3614 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3564 Alide_3565 Alide_3565 Alide_3565 3717921 3718238 - putative competence-damaged inducible protein KEGG: pzu:PHZ_c1002 putative competence-damaged inducible protein gene gene3615 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3565 Alide_3566 Alide_3566 Alide_3566 3718373 3718630 + Hsp70 family chaperone Lhs1/Orp150%2C putative KEGG: act:ACLA_020300 Hsp70 family chaperone Lhs1/Orp150%2C putative gene gene3616 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3566 Alide_3567 Alide_3567 Alide_3567 3719126 3719542 + hypothetical protein manually curated~KEGG: pfl:PFL_2126 Cro/CI family transcriptional regulator gene gene3617 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3567 Alide_3568 Alide_3568 Alide_3568 3719835 3720188 + hypothetical protein KEGG: sbn:Sbal195_0751 hypothetical protein gene gene3618 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3568 Alide_3569 Alide_3569 Alide_3569 3720275 3720787 - Protein of unknown function DUF2511 PFAM: Protein of unknown function DUF2511~KEGG: pna:Pnap_2266 hypothetical protein gene gene3619 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3569 Alide_3570 Alide_3570 Alide_3570 3720896 3721111 + hypothetical protein KEGG: mva:Mvan_4791 OsmC family protein gene gene3620 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3570 Alide_3571 Alide_3571 Alide_3571 3721108 3721410 + hypothetical protein KEGG: tbi:Tbis_2085 LuxR family ATP-dependent transcriptional regulator gene gene3621 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3571 Alide_3572 Alide_3572 Alide_3572 3721446 3721901 - hypothetical protein KEGG: xfn:XfasM23_1198 hypothetical protein gene gene3622 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3572 Alide_3573 Alide_3573 Alide_3573 3722159 3722584 + hypothetical protein KEGG: cyc:PCC7424_3069 transcriptional regulator%2C XRE family gene gene3623 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3573 Alide_3574 Alide_3574 Alide_3574 3722627 3723169 + hypothetical protein KEGG: mag:amb1496 hypothetical protein gene gene3624 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3574 Alide_3575 Alide_3575 Alide_3575 3723209 3723754 + hypothetical protein KEGG: rpi:Rpic_2348 hypothetical protein gene gene3625 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3575 Alide_3576 Alide_3576 Alide_3576 3723751 3723954 + hypothetical protein KEGG: fal:FRAAL1878 hypothetical protein gene gene3626 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3576 Alide_3577 Alide_3577 Alide_3577 3723951 3724181 + hypothetical protein KEGG: msm:MSMEG_0978 aminotransferase%2C class V superfamily protein gene gene3627 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3577 Alide_3578 Alide_3578 Alide_3578 3724226 3724579 + hypothetical protein KEGG: ypy:YPK_1206 hypothetical protein gene gene3628 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3578 Alide_3579 Alide_3579 Alide_3579 3724576 3725442 + Protein of unknown function DUF2303 PFAM: Protein of unknown function DUF2303~KEGG: nhl:Nhal_0958 hypothetical protein gene gene3629 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3579 Alide_3580 Alide_3580 Alide_3580 3725483 3725842 + hypothetical protein KEGG: pna:Pnap_2272 hypothetical protein gene gene3630 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3580 Alide_3581 Alide_3581 Alide_3581 3725868 3726272 + hypothetical protein KEGG: nhl:Nhal_0985 hypothetical protein gene gene3631 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3581 Alide_3582 Alide_3582 Alide_3582 3726269 3727264 + hypothetical protein KEGG: met:M446_4802 helicase domain-containing protein gene gene3632 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3582 Alide_3583 Alide_3583 Alide_3583 3727261 3727890 + hypothetical protein KEGG: aav:Aave_1670 hypothetical protein gene gene3633 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3583 Alide_3584 Alide_3584 Alide_3584 3727887 3728432 + hypothetical protein KEGG: pna:Pnap_3326 hypothetical protein gene gene3634 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3584 Alide_3585 Alide_3585 Alide_3585 3728445 3729059 + hypothetical protein KEGG: rpi:Rpic_2348 hypothetical protein gene gene3635 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3585 Alide_3586 Alide_3586 Alide_3586 3729113 3729505 + hypothetical protein KEGG: bgl:bglu_1g15260 hypothetical protein gene gene3636 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3586 Alide_3587 Alide_3587 Alide_3587 3729772 3730908 + retron-type reverse transcriptase KEGG: slt:Slit_0203 retron-type reverse transcriptase gene gene3637 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3587 Alide_3588 Alide_3588 Alide_3588 3730905 3731951 + Gp37Gp68 family protein PFAM: Gp37Gp68 family protein~KEGG: bpm:BURPS1710b_1658 GP38 gene gene3638 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3588 Alide_3589 Alide_3589 Alide_3589 3731948 3732280 + hypothetical protein KEGG: ppp:PHYPADRAFT_20818 hypothetical protein gene gene3639 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3589 Alide_3590 Alide_3590 Alide_3590 3732288 3734348 + C-5 cytosine-specific DNA methylase PFAM: C-5 cytosine-specific DNA methylase~KEGG: aav:Aave_1680 C-5 cytosine-specific DNA methylase gene gene3640 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3590 Alide_3591 Alide_3591 Alide_3591 3734345 3734464 + hypothetical protein gene gene3641 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3591 Alide_3592 Alide_3592 Alide_3592 3734474 3734728 + hypothetical protein KEGG: bpy:Bphyt_1156 hypothetical protein gene gene3642 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3592 Alide_3593 Alide_3593 Alide_3593 3734725 3735777 - integrase family protein PFAM: integrase family protein~KEGG: eba:ebA29 phage integrase gene gene3643 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3593 Alide_3594 Alide_3594 Alide_3594 3736798 3737112 + pseudogene gene3645 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3594 Alide_3595 Alide_3595 Alide_3595 3737968 3738732 + hypothetical protein KEGG: ngr:NAEGRDRAFT_75750 hypothetical protein gene gene3646 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3595 Alide_3596 Alide_3596 Alide_3596 3738758 3739435 - hypothetical protein KEGG: dsy:DSY3857 hypothetical protein gene gene3647 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3596 Alide_3597 Alide_3597 Alide_3597 3739847 3739984 + hypothetical protein gene gene3648 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3597 Alide_3598 Alide_3598 Alide_3598 3740148 3740423 + hypothetical protein KEGG: rbe:RBE_0670 hypothetical protein gene gene3649 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3598 Alide_3599 Alide_3599 Alide_3599 3740553 3740909 + helix-turn-helix domain protein manually curated~PFAM: helix-turn-helix domain protein~KEGG: bte:BTH_I2733 helix-turn-helix domain-containing protein~SMART: helix-turn-helix domain protein gene gene3650 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3599 Alide_3600 Alide_3600 Alide_3600 3741094 3741276 - hypothetical protein KEGG: cpi:Cpin_2216 hypothetical protein gene gene3651 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3600 Alide_3601 Alide_3601 Alide_3601 3742693 3744111 + Relaxase/mobilization nuclease family protein PFAM: Relaxase/mobilization nuclease family protein~KEGG: rpi:Rpic_0452 relaxase/mobilization nuclease family protein gene gene3652 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3601 Alide_3602 Alide_3602 Alide_3602 3744160 3744522 + hypothetical protein manually curated~KEGG: bid:Bind_0669 hypothetical protein gene gene3653 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3602 Alide_3603 Alide_3603 Alide_3603 3744546 3745481 - DNA adenine methylase KEGG: sit:TM1040_1587 DNA adenine methylase Dam~TIGRFAM: DNA adenine methylase~PFAM: D12 class N6 adenine-specific DNA methyltransferase gene gene3654 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3603 Alide_3604 Alide_3604 Alide_3604 3745535 3746362 + hypothetical protein KEGG: mgm:Mmc1_1280 hypothetical protein gene gene3655 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3604 Alide_3605 Alide_3605 Alide_3605 3746391 3747548 - integrase family protein PFAM: integrase family protein~KEGG: mms:mma_2533 phage integrase/recombinase gene gene3656 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3605 Alide_3606 Alide_3606 Alide_3606 3747751 3748650 - cytochrome oxidase assembly protein KEGG: avn:Avin_00950 cytochrome oxidase assembly protein gene gene3657 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3606 Alide_3607 Alide_3607 Alide_3607 3748917 3749069 + hypothetical protein KEGG: mag:amb2220 hypothetical protein gene gene3658 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3607 Alide_3608 Alide_3608 Alide_3608 3749083 3749622 + cytochrome c oxidase subunit II PFAM: cytochrome c oxidase subunit II~KEGG: app:CAP2UW1_1791 cytochrome c oxidase subunit II gene gene3659 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3608 Alide_3609 Alide_3609 Alide_3609 3749636 3751336 + Cytochrome-c oxidase KEGG: app:CAP2UW1_1790 cytochrome c oxidase subunit I~PFAM: cytochrome c oxidase subunit I gene gene3660 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3609 Alide_3610 Alide_3610 Alide_3610 3751354 3752256 + protoheme IX farnesyltransferase KEGG: app:CAP2UW1_1789 protoheme IX farnesyltransferase~TIGRFAM: protoheme IX farnesyltransferase~PFAM: UbiA prenyltransferase gene gene3661 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3610 Alide_3611 Alide_3611 Alide_3611 3752274 3753131 + Redoxin domain protein PFAM: Redoxin domain protein~KEGG: app:CAP2UW1_1788 electron transport protein SCO1/SenC gene gene3662 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3611 Alide_3612 Alide_3612 Alide_3612 3753146 3754729 + methyl-viologen-reducing hydrogenase delta subunit PFAM: methyl-viologen-reducing hydrogenase delta subunit~KEGG: app:CAP2UW1_1327 methyl-viologen-reducing hydrogenase delta subunit gene gene3663 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3612 Alide_3613 Alide_3613 Alide_3613 3754726 3755229 + hypothetical protein KEGG: app:CAP2UW1_1325 hypothetical protein gene gene3664 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3613 Alide_3614 Alide_3614 Alide_3614 3755226 3756674 + putative cytochrome c oxidase%2C subunit I KEGG: app:CAP2UW1_3424 putative cytochrome c oxidase%2C subunit I gene gene3665 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3614 Alide_3615 Alide_3615 Alide_3615 3756671 3758599 + Oxidoreductase FAD-binding domain protein PFAM: Oxidoreductase FAD-binding domain protein%3B ferredoxin%3B Cytochrome b/b6 domain%3B oxidoreductase FAD/NAD(P)-binding domain protein~KEGG: app:CAP2UW1_1324 oxidoreductase FAD-binding domain protein gene gene3666 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3615 Alide_3616 Alide_3616 Alide_3616 3758615 3760018 - phospholipase D/Transphosphatidylase PFAM: phospholipase D/Transphosphatidylase~KEGG: ajs:Ajs_3563 cardiolipin synthetase 2 gene gene3667 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3616 Alide_3617 Alide_3617 Alide_3617 3760015 3761391 - ATP-binding region ATPase domain protein KEGG: aav:Aave_3963 integral membrane sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene3668 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3617 Alide_3618 Alide_3618 Alide_3618 3761388 3762056 - response regulator receiver KEGG: vap:Vapar_2384 two component transcriptional regulator%2C winged helix family~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene3669 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3618 Alide_3619 Alide_3619 Alide_3619 3762085 3763593 - protease Do SMART: PDZ/DHR/GLGF domain protein~TIGRFAM: protease Do~KEGG: aav:Aave_3965 protease Do~PFAM: peptidase S1 and S6 chymotrypsin/Hap%3B PDZ/DHR/GLGF domain protein gene gene3670 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3619 Alide_3620 Alide_3620 Alide_3620 3763660 3764010 - arsenate reductase KEGG: ajs:Ajs_3564 arsenate reductase~TIGRFAM: arsenate reductase~PFAM: arsenate reductase and related gene gene3671 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3620 Alide_3621 Alide_3621 Alide_3621 3764026 3765687 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: ajs:Ajs_3565 binding-protein-dependent transport systems inner membrane component gene gene3672 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3621 Alide_3622 Alide_3622 Alide_3622 3765759 3766823 + ABC transporter related protein KEGG: ajs:Ajs_3566 ABC transporter related~PFAM: ABC transporter related%3B Transport-associated OB domain-containing protein~SMART: AAA ATPase gene gene3673 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3622 Alide_3623 Alide_3623 Alide_3623 3766826 3767566 - phospholipid/glycerol acyltransferase KEGG: dia:Dtpsy_2891 phospholipid/glycerol acyltransferase~PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase gene gene3674 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3623 Alide_3624 Alide_3624 Alide_3624 3767577 3768872 - amidohydrolase PFAM: amidohydrolase~KEGG: dia:Dtpsy_2892 amidohydrolase gene gene3675 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3624 Alide_3625 Alide_3625 Alide_3625 3768940 3769902 - aspartate carbamoyltransferase KEGG: dia:Dtpsy_2893 aspartate carbamoyltransferase catalytic subunit~TIGRFAM: aspartate carbamoyltransferase~PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region%3B aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain gene gene3676 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3625 Alide_3626 Alide_3626 Alide_3626 3769905 3770441 - Uracil phosphoribosyltransferase KEGG: dia:Dtpsy_2894 phosphoribosyltransferase~PFAM: phosphoribosyltransferase gene gene3677 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3626 Alide_3627 Alide_3627 Alide_3627 3770438 3770851 - Holliday junction resolvase YqgF KEGG: dia:Dtpsy_2895 Holliday junction resolvase-like protein~PFAM: Holliday junction resolvase YqgF~SMART: Resolvase RNase H domain protein fold gene gene3678 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3627 Alide_3628 Alide_3628 Alide_3628 3770848 3771474 - protein of unknown function DUF179 KEGG: dia:Dtpsy_2896 protein of unknown function DUF179~manually curated~PFAM: protein of unknown function DUF179 gene gene3679 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3628 Alide_3629 Alide_3629 Alide_3629 3771563 3777406 - response regulator receiver KEGG: dia:Dtpsy_2897 CheA signal transduction histidine kinase~PFAM: response regulator receiver%3B ATP-binding region ATPase domain protein%3B Hpt domain protein%3B Signal transducing histidine kinase homodimeric%3B CheW domain protein~SMART: response regulator receiver%3B ATP-binding region ATPase domain protein%3B Hpt domain protein%3B CheW domain protein gene gene3680 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3629 Alide_3630 Alide_3630 Alide_3630 3777450 3779714 - chemotaxis sensory transducer KEGG: dia:Dtpsy_2898 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer~SMART: chemotaxis sensory transducer gene gene3681 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3630 Alide_3631 Alide_3631 Alide_3631 3779735 3780262 - CheW domain protein KEGG: ajs:Ajs_3576 putative CheW protein~PFAM: CheW domain protein~SMART: CheW domain protein gene gene3682 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3631 Alide_3632 Alide_3632 Alide_3632 3780279 3780644 - response regulator receiver KEGG: dia:Dtpsy_2900 response regulator receiver protein~PFAM: response regulator receiver~SMART: response regulator receiver gene gene3683 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3632 Alide_3633 Alide_3633 Alide_3633 3780644 3781048 - response regulator receiver KEGG: aav:Aave_0901 response regulator receiver protein~PFAM: response regulator receiver~SMART: response regulator receiver gene gene3684 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3633 Alide_3634 Alide_3634 Alide_3634 3781100 3781252 - Rubredoxin-type Fe(Cys)4 protein KEGG: dia:Dtpsy_2902 rubredoxin-type Fe(Cys)4 protein~manually curated~PFAM: Rubredoxin-type Fe(Cys)4 protein gene gene3685 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3634 Alide_3635 Alide_3635 Alide_3635 3781413 3782315 + Phosphomethylpyrimidine kinase type-1 PFAM: Phosphomethylpyrimidine kinase type-1~KEGG: dia:Dtpsy_2903 phosphomethylpyrimidine kinase type-1 gene gene3686 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3635 Alide_3636 Alide_3636 Alide_3636 3782299 3783603 + glutamate-1-semialdehyde-2%2C1-aminomutase KEGG: dia:Dtpsy_2904 glutamate-1-semialdehyde aminotransferase~TIGRFAM: glutamate-1-semialdehyde-2%2C1-aminomutase~PFAM: aminotransferase class-III gene gene3687 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3636 Alide_3637 Alide_3637 Alide_3637 3783705 3785303 - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase SMART: AICARFT/IMPCHase bienzyme formylation region~TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~KEGG: dia:Dtpsy_2907 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~PFAM: AICARFT/IMPCHase bienzyme formylation region%3B MGS domain protein gene gene3688 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3637 Alide_3638 Alide_3638 Alide_3638 3785385 3785621 - helix-turn-helix Fis-type PFAM: helix-turn-helix Fis-type~KEGG: dia:Dtpsy_2908 transcriptional regulator%2C fis family gene gene3689 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3638 Alide_3639 Alide_3639 Alide_3639 3785599 3786657 - TIM-barrel protein%2C nifR3 family KEGG: dia:Dtpsy_2909 TIM-barrel protein%2C nifR3 family~TIGRFAM: TIM-barrel protein%2C nifR3 family~PFAM: dihydrouridine synthase DuS gene gene3690 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3639 Alide_3640 Alide_3640 Alide_3640 3786806 3787315 + hypothetical protein KEGG: dia:Dtpsy_2910 hypothetical protein gene gene3691 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3640 Alide_3641 Alide_3641 Alide_3641 3787322 3788296 - regulatory protein LysR PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: dia:Dtpsy_2911 transcriptional regulator%2C LysR family gene gene3692 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3641 Alide_3642 Alide_3642 Alide_3642 3788492 3789499 + hypothetical protein KEGG: dia:Dtpsy_2912 hypothetical protein gene gene3693 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3642 Alide_3643 Alide_3643 Alide_3643 3789513 3790958 + amidohydrolase KEGG: dia:Dtpsy_2913 amidohydrolase~TIGRFAM: amidohydrolase~PFAM: peptidase dimerisation domain protein gene gene3694 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3643 Alide_3644 Alide_3644 Alide_3644 3791014 3792525 - protein of unknown function DUF112 transmembrane PFAM: protein of unknown function DUF112 transmembrane~KEGG: dia:Dtpsy_2745 protein of unknown function DUF112 transmembrane gene gene3695 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3644 Alide_3645 Alide_3645 Alide_3645 3792559 3793047 - hypothetical protein KEGG: vap:Vapar_0318 protein of unknown function DUF1468 gene gene3696 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3645 Alide_3646 Alide_3646 Alide_3646 3793243 3794625 - ATP-binding region ATPase domain protein KEGG: mms:mma_0288 two-component sensor histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein gene gene3697 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3646 Alide_3647 Alide_3647 Alide_3647 3794622 3795314 - transcriptional regulator domain-containing protein KEGG: bpt:Bpet1596 two-component transcriptional regulator~PFAM: transcriptional regulator domain-containing protein%3B response regulator receiver~SMART: response regulator receiver gene gene3698 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3647 Alide_3648 Alide_3648 Alide_3648 3795324 3796418 - GTP-binding protein YchF KEGG: dia:Dtpsy_2928 GTP-binding protein YchF~TIGRFAM: GTP-binding protein YchF~PFAM: protein of unknown function DUF933%3B GTP-binding protein HSR1-related gene gene3699 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3648 Alide_3649 Alide_3649 Alide_3649 3796560 3797690 + Ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family KEGG: ajs:Ajs_3620 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase~TIGRFAM: Ubiquinone biosynthesis hydroxylase%2C UbiH/UbiF/VisC/COQ6 family~PFAM: FAD dependent oxidoreductase gene gene3700 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3649 Alide_3650 Alide_3650 Alide_3650 3797734 3798453 + disulfide bond isomerase%2C DsbC/G-like protein PFAM: Disulphide bond isomerase%2C DsbC/G-like~KEGG: ajs:Ajs_3621 thiol:disulfide interchange protein DsbC gene gene3701 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3650 Alide_3651 Alide_3651 Alide_3651 3798598 3800379 + peptidase M61 domain protein PFAM: peptidase M61 domain protein~KEGG: ajs:Ajs_3622 peptidase M61 domain-containing protein gene gene3702 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3651 Alide_3652 Alide_3652 Alide_3652 3800437 3801216 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: ajs:Ajs_3623 short chain enoyl-CoA hydratase gene gene3703 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3652 Alide_3653 Alide_3653 Alide_3653 3801400 3801801 + hypothetical protein KEGG: aav:Aave_0876 hypothetical protein gene gene3705 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3653 Alide_3654 Alide_3654 Alide_3654 3801869 3803218 + tRNA-i(6)A37 thiotransferase enzyme MiaB TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB%3B RNA modification enzyme%2C MiaB family~PFAM: protein of unknown function UPF0004 %3B Radical SAM domain protein%3B deoxyribonuclease/rho motif-related TRAM~KEGG: dia:Dtpsy_2935 (dimethylallyl)adenosine tRNA methylthiotransferase~SMART: Elongator protein 3/MiaB/NifB gene gene3706 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3654 Alide_3655 Alide_3655 Alide_3655 3803263 3804642 - signal recognition particle protein TIGRFAM: signal recognition particle protein~PFAM: GTP-binding signal recognition particle SRP54 G- domain%3B GTP-binding signal recognition particle SRP54 helical bundle%3B Signal peptide binding (SRP54) M- domain protein~KEGG: ajs:Ajs_3626 signal recognition particle subunit FFH/SRP54 (SRP54)~SMART: AAA ATPase gene gene3707 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3655 Alide_3656 Alide_3656 Alide_3656 3804732 3805529 + cytochrome c assembly protein PFAM: cytochrome c assembly protein~KEGG: dia:Dtpsy_2937 cytochrome c assembly protein gene gene3708 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3656 Alide_3657 Alide_3657 Alide_3657 3805526 3805753 + hypothetical protein KEGG: dia:Dtpsy_2938 hypothetical protein gene gene3709 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3657 Alide_3658 Alide_3658 Alide_3658 3805766 3807469 + ATP-binding region ATPase domain protein KEGG: dia:Dtpsy_2939 histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene3710 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3658 Alide_3659 Alide_3659 Alide_3659 3807486 3808976 + sigma-54 factor interaction domain-containing protein KEGG: dia:Dtpsy_2940 two component%2C sigma54 specific%2C transcriptional regulator%2C fis family~PFAM: sigma-54 factor interaction domain-containing protein%3B response regulator receiver%3B helix-turn-helix Fis-type~SMART: response regulator receiver%3B AAA ATPase gene gene3711 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3659 Alide_3660 Alide_3660 Alide_3660 3808960 3809541 + N-acetylmuramoyl-L-alanine amidase family 2 KEGG: dia:Dtpsy_2941 N-acetyl-anhydromuranmyl-L-alanine amidase~PFAM: N-acetylmuramoyl-L-alanine amidase family 2~SMART: N-acetylmuramoyl-L-alanine amidase family 2 gene gene3712 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3660 Alide_3661 Alide_3661 Alide_3661 3809826 3812738 + ribonucleoside-diphosphate reductase%2C alpha subunit KEGG: ajs:Ajs_3632 ribonucleotide-diphosphate reductase subunit alpha~TIGRFAM: ribonucleoside-diphosphate reductase%2C alpha subunit~PFAM: ribonucleotide reductase large subunit%3B Ribonucleotide reductase large subunit domain protein%3B ATP-cone domain protein gene gene3713 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3661 Alide_3662 Alide_3662 Alide_3662 3812877 3814067 + Ribonucleoside-diphosphate reductase KEGG: dia:Dtpsy_2943 ribonucleotide-diphosphate reductase subunit beta~PFAM: ribonucleotide reductase gene gene3714 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3662 Alide_3663 Alide_3663 Alide_3663 3814247 3814795 + histone protein KEGG: dia:Dtpsy_2944 histone protein gene gene3715 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3663 Alide_3664 Alide_3664 Alide_3664 3814878 3815774 - PfkB domain protein PFAM: PfkB domain protein~KEGG: dia:Dtpsy_2945 PfkB domain protein gene gene3716 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3664 Alide_3665 Alide_3665 Alide_3665 3815809 3816963 - MJ0042 family finger-like protein TIGRFAM: MJ0042 family finger-like protein~KEGG: dia:Dtpsy_2946 MJ0042 family finger-like protein gene gene3717 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3665 Alide_3666 Alide_3666 Alide_3666 3817017 3817913 - ribosomal protein L11 methyltransferase KEGG: ajs:Ajs_3637 ribosomal protein L11 methyltransferase~TIGRFAM: ribosomal protein L11 methyltransferase~PFAM: ribosomal L11 methyltransferase gene gene3718 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3666 Alide_3667 Alide_3667 Alide_3667 3818006 3819355 - acetyl-CoA carboxylase%2C biotin carboxylase KEGG: ajs:Ajs_3638 acetyl-CoA carboxylase%2C biotin carboxylase~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxylase~PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B biotin carboxylase domain protein gene gene3719 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3667 Alide_3668 Alide_3668 Alide_3668 3819371 3819829 - acetyl-CoA carboxylase%2C biotin carboxyl carrier protein KEGG: dia:Dtpsy_2949 acetyl-CoA carboxylase%2C biotin carboxyl carrier protein~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxyl carrier protein~PFAM: biotin/lipoyl attachment domain-containing protein gene gene3720 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3668 Alide_3669 Alide_3669 Alide_3669 3819940 3820515 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~KEGG: dia:Dtpsy_2950 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen gene gene3721 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3669 Alide_3670 Alide_3670 Alide_3670 3820512 3821126 - hypothetical protein KEGG: ajs:Ajs_3641 hypothetical protein gene gene3722 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3670 Alide_3671 Alide_3671 Alide_3671 3821242 3822633 + UDP-N-acetylmuramate manually curated~TIGRFAM: UDP-N-acetylmuramate~KEGG: ajs:Ajs_3642 UDP-N-acetylmuramate~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein gene gene3723 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3671 Alide_3672 Alide_3672 Alide_3672 3822681 3822992 - hypothetical protein KEGG: dia:Dtpsy_2953 hypothetical protein gene gene3724 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3672 Alide_3673 Alide_3673 Alide_3673 3823078 3824196 - phospho-2-dehydro-3-deoxyheptonate aldolase TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase~KEGG: dia:Dtpsy_2954 phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I/KDSA gene gene3725 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3673 Alide_3674 Alide_3674 Alide_3674 3824437 3825897 - peptidase U62 modulator of DNA gyrase PFAM: peptidase U62 modulator of DNA gyrase~KEGG: dia:Dtpsy_2956 peptidase U62 modulator of DNA gyrase gene gene3726 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3674 Alide_3675 Alide_3675 Alide_3675 3825936 3827117 - rod shape-determining protein RodA KEGG: dia:Dtpsy_2957 rod shape-determining protein RodA~TIGRFAM: rod shape-determining protein RodA~PFAM: cell cycle protein gene gene3727 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3675 Alide_3676 Alide_3676 Alide_3676 3827153 3827740 + protein of unknown function UPF0227 PFAM: protein of unknown function UPF0227~KEGG: ajs:Ajs_3649 hypothetical protein gene gene3728 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3676 Alide_3677 Alide_3677 Alide_3677 3827843 3829402 - O-antigen polymerase PFAM: O-antigen polymerase~KEGG: dia:Dtpsy_2960 O-antigen polymerase gene gene3729 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3677 Alide_3678 Alide_3678 Alide_3678 3829552 3829965 - cytochrome c class I PFAM: cytochrome c class I~KEGG: dia:Dtpsy_2961 cytochrome c class I gene gene3730 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3678 Alide_3679 Alide_3679 Alide_3679 3829962 3830543 - hypothetical protein KEGG: ajs:Ajs_3652 hypothetical protein gene gene3731 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3679 Alide_3680 Alide_3680 Alide_3680 3830632 3831351 - RNA polymerase sigma factor%2C sigma-70 family KEGG: dia:Dtpsy_2963 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2 gene gene3732 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3680 Alide_3681 Alide_3681 Alide_3681 3831475 3833553 + ribonuclease II PFAM: ribonuclease II~KEGG: ajs:Ajs_3654 ribonuclease II gene gene3733 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3681 Alide_3682 Alide_3682 Alide_3682 3833563 3834423 + TonB family protein TIGRFAM: TonB family protein~KEGG: ajs:Ajs_3655 TonB family protein gene gene3734 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3682 Alide_3683 Alide_3683 Alide_3683 3834430 3835278 + shikimate 5-dehydrogenase KEGG: ajs:Ajs_3656 shikimate 5-dehydrogenase~TIGRFAM: shikimate 5-dehydrogenase~PFAM: Shikimate dehydrogenase substrate binding domain protein%3B Shikimate/quinate 5-dehydrogenase gene gene3735 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3683 Alide_3684 Alide_3684 Alide_3684 3835292 3836008 + monofunctional biosynthetic peptidoglycan transglycosylase KEGG: ajs:Ajs_3657 monofunctional biosynthetic peptidoglycan transglycosylase~TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase~PFAM: glycosyl transferase family 51 gene gene3736 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3684 Alide_3685 Alide_3685 Alide_3685 3836032 3836358 + hemagglutinin-related protein KEGG: rso:RSc1775 hemagglutinin-related protein gene gene3737 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3685 Alide_3686 Alide_3686 Alide_3686 3836512 3837324 - Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_3784 integrase catalytic subunit gene gene3738 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3686 Alide_3687 Alide_3687 Alide_3687 3837342 3837608 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ctt:CtCNB1_1899 transposase IS3/IS911 gene gene3739 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3687 Alide_3688 Alide_3688 Alide_3688 3837961 3838509 + crossover junction endodeoxyribonuclease RuvC TIGRFAM: crossover junction endodeoxyribonuclease RuvC~KEGG: dia:Dtpsy_2968 Holliday junction resolvase~PFAM: Crossover junction endodeoxyribonuclease RuvC gene gene3740 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3688 Alide_3689 Alide_3689 Alide_3689 3838512 3839210 - helix-turn-helix HxlR type PFAM: helix-turn-helix HxlR type~KEGG: mlo:mlr1855 hypothetical protein gene gene3741 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3689 Alide_3690 Alide_3690 Alide_3690 3839638 3840459 + Methyltransferase type 11 PFAM: Methyltransferase type 11~KEGG: acp:A2cp1_1683 methyltransferase type 11 gene gene3742 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3690 Alide_3691 Alide_3691 Alide_3691 3840471 3842318 - thiamine biosynthesis protein ThiC KEGG: dia:Dtpsy_2971 thiamine biosynthesis protein ThiC~TIGRFAM: thiamine biosynthesis protein ThiC~PFAM: thiamine biosynthesis protein ThiC gene gene3743 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3691 Alide_3692 Alide_3692 Alide_3692 3842555 3842731 - hypothetical protein KEGG: dia:Dtpsy_2972 hypothetical protein gene gene3744 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3692 Alide_3693 Alide_3693 Alide_3693 3842741 3843664 - UDP-3-0-acyl N-acetylglucosamine deacetylase KEGG: dia:Dtpsy_2973 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase~TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase~PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase gene gene3745 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3693 Alide_3694 Alide_3694 Alide_3694 3843704 3844468 - regulatory protein IclR KEGG: bav:BAV0211 IclR-family transcriptional regulator~PFAM: regulatory protein IclR~SMART: regulatory protein IclR gene gene3746 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3694 Alide_3695 Alide_3695 Alide_3695 3844558 3845640 + hypothetical protein KEGG: aav:Aave_3942 hypothetical protein gene gene3747 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3695 Alide_3696 Alide_3696 Alide_3696 3845652 3847370 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: bpt:Bpet0794 acyl-CoA synthetase gene gene3748 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3696 Alide_3697 Alide_3697 Alide_3697 3847367 3848110 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bbr:BB4035 putative oxidoreductase gene gene3749 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3697 Alide_3698 Alide_3698 Alide_3698 3848184 3849389 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: reu:Reut_B3887 UreA/short-chain amide ABC transporter gene gene3750 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3698 Alide_3699 Alide_3699 Alide_3699 3849406 3850368 + exported protein KEGG: bav:BAV0225 exported protein gene gene3751 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3699 Alide_3700 Alide_3700 Alide_3700 3850372 3851571 + acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: bav:BAV0226 acyl-CoA dehydrogenase gene gene3752 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3700 Alide_3701 Alide_3701 Alide_3701 3851652 3852872 - cell division protein FtsZ KEGG: dia:Dtpsy_2975 cell division protein FtsZ~TIGRFAM: cell division protein FtsZ~PFAM: Tubulin/FtsZ GTPase%3B Tubulin/FtsZ%2C 2-layer sandwich domain gene gene3753 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3701 Alide_3702 Alide_3702 Alide_3702 3853044 3854273 - cell division protein FtsA KEGG: dia:Dtpsy_2976 cell division protein FtsA~TIGRFAM: cell division protein FtsA~PFAM: cell division protein FtsA gene gene3754 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3702 Alide_3703 Alide_3703 Alide_3703 3854279 3855151 - Polypeptide-transport-associated domain protein FtsQ-type PFAM: Polypeptide-transport-associated domain protein FtsQ-type%3B cell division protein FtsQ~KEGG: dia:Dtpsy_2977 cell division protein FtsQ gene gene3755 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3703 Alide_3704 Alide_3704 Alide_3704 3855156 3856124 - D-alanine/D-alanine ligase TIGRFAM: D-alanine/D-alanine ligase~KEGG: ajs:Ajs_3668 D-alanine--D-alanine ligase~PFAM: D-alanine--D-alanine ligase domain protein gene gene3756 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3704 Alide_3705 Alide_3705 Alide_3705 3856121 3857554 - UDP-N-acetylmuramate/alanine ligase KEGG: dia:Dtpsy_2979 UDP-N-acetylmuramate--L-alanine ligase~TIGRFAM: UDP-N-acetylmuramate/alanine ligase~PFAM: cytoplasmic peptidoglycan synthetase domain protein%3B Mur ligase middle domain protein gene gene3757 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3705 Alide_3706 Alide_3706 Alide_3706 3857551 3858615 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase KEGG: aav:Aave_0821 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase~TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase~PFAM: Glycosyltransferase 28 domain%3B glycosyl transferase family 28 gene gene3758 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3706 Alide_3707 Alide_3707 Alide_3707 3858612 3859883 - cell division protein FtsW KEGG: ajs:Ajs_3671 cell division protein FtsW~TIGRFAM: cell division protein FtsW~PFAM: cell cycle protein gene gene3759 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3707 Alide_3708 Alide_3708 Alide_3708 3859880 3861661 - UDP-N-acetylmuramoylalanine/D-glutamate ligase KEGG: dia:Dtpsy_2982 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase~TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein gene gene3760 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3708 Alide_3709 Alide_3709 Alide_3709 3861658 3862836 - phospho-N-acetylmuramoyl-pentapeptide-transferase KEGG: dia:Dtpsy_2983 phospho-N-acetylmuramoyl-pentapeptide-transferase~TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase~PFAM: Glycosyl transferase%2C family 4%2C conserved region%3B Phospho-N-acetylmuramoyl-pentapeptide transferase%2C conserved site gene gene3761 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3709 Alide_3710 Alide_3710 Alide_3710 3862827 3864218 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate/D-alanyl-D-alanyl ligase KEGG: ajs:Ajs_3674 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase~TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate/D-alanyl-D-alanyl ligase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein gene gene3762 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3710 Alide_3711 Alide_3711 Alide_3711 3864215 3865720 - UDP-N-acetylmuramyl-tripeptide synthetase KEGG: dia:Dtpsy_2985 UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase~TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein gene gene3763 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3711 Alide_3712 Alide_3712 Alide_3712 3865717 3867465 - Peptidoglycan glycosyltransferase KEGG: dia:Dtpsy_2986 peptidoglycan glycosyltransferase~PFAM: penicillin-binding protein transpeptidase%3B Penicillin-binding protein dimerisation domain gene gene3764 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3712 Alide_3713 Alide_3713 Alide_3713 3867462 3867776 - cell division protein FtsL KEGG: aav:Aave_0814 cell division protein FtsL~TIGRFAM: cell division protein FtsL~PFAM: cell division protein FtsL gene gene3765 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3713 Alide_3714 Alide_3714 Alide_3714 3867773 3868699 - S-adenosyl-methyltransferase MraW KEGG: dia:Dtpsy_2988 S-adenosyl-methyltransferase MraW~TIGRFAM: S-adenosyl-methyltransferase MraW~PFAM: methyltransferase gene gene3766 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3714 Alide_3715 Alide_3715 Alide_3715 3868709 3869137 - MraZ protein KEGG: dia:Dtpsy_2989 cell division protein MraZ~TIGRFAM: MraZ protein~PFAM: MraZ domain gene gene3767 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3715 Alide_3716 Alide_3716 Alide_3716 3869383 3870687 - heat shock protein HslVU%2C ATPase subunit HslU TIGRFAM: heat shock protein HslVU%2C ATPase subunit HslU~PFAM: ATPase AAA-2 domain protein~KEGG: dia:Dtpsy_2990 ATP-dependent protease ATP-binding subunit HslU~SMART: AAA ATPase gene gene3768 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3716 Alide_3717 Alide_3717 Alide_3717 3870774 3871319 - 20S proteasome A and B subunits PFAM: 20S proteasome A and B subunits~KEGG: dia:Dtpsy_2991 ATP-dependent protease peptidase subunit gene gene3769 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3717 Alide_3718 Alide_3718 Alide_3718 3871380 3873116 - hypothetical protein KEGG: dia:Dtpsy_2992 hypothetical protein gene gene3770 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3718 Alide_3719 Alide_3719 Alide_3719 3873148 3873639 - RNA polymerase-binding protein DksA TIGRFAM: RNA polymerase-binding protein DksA~KEGG: dia:Dtpsy_2993 transcriptional regulator%2C TraR/DksA family gene gene3771 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3719 Alide_3720 Alide_3720 Alide_3720 3873990 3875060 - cobalamin synthesis protein P47K PFAM: cobalamin synthesis protein P47K%3B cobalamin synthesis CobW domain protein~KEGG: dia:Dtpsy_2994 cobalamin synthesis protein P47K gene gene3772 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3720 Alide_3721 Alide_3721 Alide_3721 3875153 3876268 - response regulator receiver KEGG: dac:Daci_1875 response regulator receiver protein~PFAM: response regulator receiver~SMART: response regulator receiver gene gene3773 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3721 Alide_3722 Alide_3722 Alide_3722 3876261 3876935 - DNA binding domain protein%2C excisionase family TIGRFAM: DNA binding domain protein%2C excisionase family~PFAM: response regulator receiver%3B regulatory protein MerR~KEGG: dac:Daci_1874 response regulator receiver protein~SMART: response regulator receiver gene gene3774 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3722 Alide_3723 Alide_3723 Alide_3723 3877016 3877402 + response regulator receiver KEGG: ctt:CtCNB1_1998 response regulator receiver protein~PFAM: response regulator receiver~SMART: response regulator receiver gene gene3775 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3723 Alide_3724 Alide_3724 Alide_3724 3877542 3879921 + pseudogene gene3776 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3724 Alide_3725 Alide_3725 Alide_3725 3879964 3880632 - DNA binding domain protein%2C excisionase family TIGRFAM: DNA binding domain protein%2C excisionase family~PFAM: response regulator receiver%3B regulatory protein MerR~KEGG: aav:Aave_2239 response regulator receiver protein~SMART: response regulator receiver gene gene3777 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3725 Alide_3726 Alide_3726 Alide_3726 3880697 3881083 + response regulator receiver KEGG: lch:Lcho_0734 response regulator receiver protein~PFAM: response regulator receiver~SMART: response regulator receiver gene gene3778 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3726 Alide_3727 Alide_3727 Alide_3727 3881080 3881889 + metal-dependent phosphohydrolase HD sub domain protein KEGG: dac:Daci_0737 metal dependent phosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region gene gene3779 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3727 Alide_3728 Alide_3728 Alide_3728 3882027 3884105 + PAS sensor protein TIGRFAM: PAS sensor protein~PFAM: ATP-binding region ATPase domain protein%3B PAS fold-4 domain protein%3B histidine kinase A domain protein~KEGG: dac:Daci_0735 PAS/PAC sensor signal transduction histidine kinase~SMART: ATP-binding region ATPase domain protein%3B PAS domain containing protein%3B histidine kinase A domain protein gene gene3780 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3728 Alide_3729 Alide_3729 Alide_3729 3884087 3885844 + ATP-binding region ATPase domain protein KEGG: lch:Lcho_4371 histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene3781 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3729 Alide_3730 Alide_3730 Alide_3730 3886038 3887732 + chemotaxis sensory transducer KEGG: rfr:Rfer_1480 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein gene gene3782 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3730 Alide_3731 Alide_3731 Alide_3731 3887749 3888711 - tyrosine recombinase XerC KEGG: dia:Dtpsy_2996 tyrosine recombinase XerC~TIGRFAM: tyrosine recombinase XerC~PFAM: integrase family protein%3B integrase domain protein SAM domain protein gene gene3783 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3731 Alide_3732 Alide_3732 Alide_3732 3888805 3889500 - protein of unknown function DUF484 PFAM: protein of unknown function DUF484~KEGG: dia:Dtpsy_2997 protein of unknown function DUF484 gene gene3784 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3732 Alide_3733 Alide_3733 Alide_3733 3889497 3890375 - diaminopimelate epimerase KEGG: dia:Dtpsy_2998 diaminopimelate epimerase~TIGRFAM: diaminopimelate epimerase~PFAM: diaminopimelate epimerase gene gene3785 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3733 Alide_3734 Alide_3734 Alide_3734 3890451 3892145 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: dia:Dtpsy_3001 beta-lactamase domain protein gene gene3786 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3734 Alide_3735 Alide_3735 Alide_3735 3892138 3892863 + RNA-binding S4 domain protein KEGG: dia:Dtpsy_3002 RNA-binding S4 domain protein~PFAM: RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein gene gene3787 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3735 Alide_3736 Alide_3736 Alide_3736 3893359 3893586 - hypothetical protein KEGG: ajs:Ajs_3722 hypothetical protein gene gene3789 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3736 Alide_3737 Alide_3737 Alide_3737 3893696 3894616 + cysteine synthase KEGG: dac:Daci_1442 cysteine synthase~TIGRFAM: cysteine synthase%3B cysteine synthase A~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit gene gene3790 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3737 Alide_3738 Alide_3738 Alide_3738 3894647 3895747 + heat shock protein DnaJ domain protein PFAM: heat shock protein DnaJ domain protein~KEGG: bvi:Bcep1808_3882 heat shock protein DnaJ domain-containing protein gene gene3791 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3738 Alide_3739 Alide_3739 Alide_3739 3895879 3897636 + FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: dia:Dtpsy_3010 FAD dependent oxidoreductase gene gene3792 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3739 Alide_3740 Alide_3740 Alide_3740 3897701 3898150 + Carboxymuconolactone decarboxylase PFAM: Carboxymuconolactone decarboxylase~KEGG: dac:Daci_0909 carboxymuconolactone decarboxylase gene gene3793 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3740 Alide_3741 Alide_3741 Alide_3741 3898189 3899091 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dac:Daci_3510 LysR family transcriptional regulator gene gene3794 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3741 Alide_3742 Alide_3742 Alide_3742 3899161 3900030 + Citryl-CoA lyase KEGG: dac:Daci_3511 citrate (pro-3S)-lyase~PFAM: HpcH/HpaI aldolase gene gene3795 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3742 Alide_3743 Alide_3743 Alide_3743 3900058 3901035 + hypothetical protein KEGG: dac:Daci_3512 hypothetical protein gene gene3796 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3743 Alide_3744 Alide_3744 Alide_3744 3901099 3902268 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: dac:Daci_3513 L-carnitine dehydratase/bile acid-inducible protein F gene gene3797 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3744 Alide_3745 Alide_3745 Alide_3745 3902265 3903107 + amidohydrolase 2 KEGG: dac:Daci_3514 amidohydrolase 2~manually curated~PFAM: amidohydrolase 2 gene gene3798 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3745 Alide_3746 Alide_3746 Alide_3746 3903124 3904080 + hypothetical protein KEGG: dac:Daci_3515 hypothetical protein gene gene3799 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3746 Alide_3747 Alide_3747 Alide_3747 3904135 3904641 - regulatory protein MarR KEGG: cti:RALTA_B1490 transcriptional activator of cyclohexanecarboxylate anaerobic degradation%3B MarR type~PFAM: regulatory protein MarR~SMART: regulatory protein MarR gene gene3800 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3747 Alide_3748 Alide_3748 Alide_3748 3904772 3905539 + 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase KEGG: lch:Lcho_1185 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase~TIGRFAM: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase~PFAM: short-chain dehydrogenase/reductase SDR gene gene3801 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3748 Alide_3749 Alide_3749 Alide_3749 3905583 3906365 + 2-ketocyclohexanecarboxyl-CoA hydrolase KEGG: vei:Veis_4105 enoyl-CoA hydratase/isomerase~TIGRFAM: 2-ketocyclohexanecarboxyl-CoA hydrolase~PFAM: Enoyl-CoA hydratase/isomerase gene gene3802 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3749 Alide_3750 Alide_3750 Alide_3750 3906385 3907542 + cyclohexanecarboxyl-CoA dehydrogenase KEGG: lch:Lcho_1187 cyclohexanecarboxyl-CoA dehydrogenase~TIGRFAM: cyclohexanecarboxyl-CoA dehydrogenase~PFAM: acyl-CoA dehydrogenase domain-containing protein gene gene3803 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3750 Alide_3751 Alide_3751 Alide_3751 3907578 3909233 + cyclohexanecarboxylate-CoA ligase KEGG: pna:Pnap_2126 cyclohexanecarboxylate-CoA ligase~TIGRFAM: cyclohexanecarboxylate-CoA ligase~PFAM: AMP-dependent synthetase and ligase gene gene3804 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3751 Alide_3752 Alide_3752 Alide_3752 3909334 3910266 - Electron transfer flavoprotein alpha subunit PFAM: Electron transfer flavoprotein alpha subunit %3B Electron transfer flavoprotein alpha/beta-subunit~KEGG: dia:Dtpsy_2298 electron transfer flavoprotein alpha subunit gene gene3805 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3752 Alide_3753 Alide_3753 Alide_3753 3910284 3911033 - Electron transfer flavoprotein alpha/beta-subunit PFAM: Electron transfer flavoprotein alpha/beta-subunit~KEGG: dia:Dtpsy_3012 electron transfer flavoprotein alpha/beta-subunit gene gene3806 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3753 Alide_3754 Alide_3754 Alide_3754 3911058 3912032 - 2-nitropropane dioxygenase NPD PFAM: 2-nitropropane dioxygenase NPD~KEGG: ajs:Ajs_3732 2-nitropropane dioxygenase%2C NPD gene gene3807 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3754 Alide_3755 Alide_3755 Alide_3755 3912040 3913035 - hypothetical protein KEGG: dac:Daci_1400 hypothetical protein gene gene3808 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3755 Alide_3756 Alide_3756 Alide_3756 3913108 3914340 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: ajs:Ajs_3734 L-carnitine dehydratase/bile acid-inducible protein F gene gene3809 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3756 Alide_3757 Alide_3757 Alide_3757 3914365 3914787 - thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: mrb:Mrub_0164 thioesterase superfamily protein gene gene3810 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3757 Alide_3758 Alide_3758 Alide_3758 3914824 3915630 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: dia:Dtpsy_3016 enoyl-CoA hydratase gene gene3811 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3758 Alide_3759 Alide_3759 Alide_3759 3915748 3916878 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: dac:Daci_1396 acyl-CoA dehydrogenase domain-containing protein gene gene3812 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3759 Alide_3760 Alide_3760 Alide_3760 3916889 3918085 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: ajs:Ajs_3737 acyl-CoA dehydrogenase domain-containing protein gene gene3813 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3760 Alide_3761 Alide_3761 Alide_3761 3918098 3919297 - acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~KEGG: dia:Dtpsy_3019 acetyl-CoA acetyltransferase~PFAM: Thiolase-like gene gene3814 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3761 Alide_3762 Alide_3762 Alide_3762 3919443 3921560 - 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B Enoyl-CoA hydratase/isomerase%3B 3-hydroxyacyl-CoA dehydrogenase domain-containing protein~KEGG: dac:Daci_1393 3-hydroxyacyl-CoA dehydrogenase NAD-binding gene gene3815 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3762 Alide_3763 Alide_3763 Alide_3763 3921671 3922579 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dac:Daci_1392 LysR family transcriptional regulator gene gene3816 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3763 Alide_3764 Alide_3764 Alide_3764 3922617 3922931 + transposase KEGG: bpe:BP0072 transposase gene gene3817 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3764 Alide_3765 Alide_3765 Alide_3765 3922928 3923749 + integrase core subunit and catalytic region pseudogene gene3818 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3765 Alide_3767 Alide_3767 Alide_3767 3923748 3924041 + pseudogene gene3819 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3767 Alide_3768 Alide_3768 Alide_3768 3924165 3924488 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein gene gene3820 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3768 Alide_3769 Alide_3769 Alide_3769 3924485 3925399 + Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_0907 integrase catalytic subunit gene gene3821 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3769 Alide_3770 Alide_3770 Alide_3770 3925534 3926346 - Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: ajs:Ajs_3784 integrase catalytic subunit gene gene3822 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3770 Alide_3771 Alide_3771 Alide_3771 3926364 3926630 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: ctt:CtCNB1_1899 transposase IS3/IS911 gene gene3823 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3771 Alide_3772 Alide_3772 Alide_3772 3926725 3926997 + glyoxalase/bleomycin resistance protein/dioxygenase KEGG: vap:Vapar_6180 glyoxalase/bleomycin resistance protein/dioxygenase gene gene3824 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3772 Alide_3773 Alide_3773 Alide_3773 3927121 3929969 - pseudogene gene3825 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3773 Alide_3774 Alide_3774 Alide_3774 3927302 3928816 - transposase IS66 KEGG: dia:Dtpsy_2523 transposase IS66 gene gene3826 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3774 Alide_3775 Alide_3775 Alide_3775 3928899 3929231 - IS66 Orf2 family protein PFAM: IS66 Orf2 family protein~KEGG: rfr:Rfer_2710 IS66 Orf2 like gene gene3827 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3775 Alide_3776 Alide_3776 Alide_3776 3929228 3929656 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rfr:Rfer_2709 transposase IS3/IS911 gene gene3828 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3776 Alide_3777 Alide_3777 Alide_3777 3930055 3930927 - peptidase M48 Ste24p PFAM: peptidase M48 Ste24p~KEGG: ajs:Ajs_3742 heat shock protein HtpX gene gene3829 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3777 Alide_3778 Alide_3778 Alide_3778 3931054 3931845 - putative transmembrane protein KEGG: ajs:Ajs_3743 putative transmembrane protein gene gene3830 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3778 Alide_3779 Alide_3779 Alide_3779 3931827 3932876 - dihydroorotase%2C homodimeric type TIGRFAM: dihydroorotase%2C homodimeric type~KEGG: dia:Dtpsy_3026 dihydroorotase~PFAM: amidohydrolase gene gene3831 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3779 Alide_3780 Alide_3780 Alide_3780 3932998 3933502 - pseudogene gene3832 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3780 Alide_3781 Alide_3781 Alide_3781 3933633 3934022 + protein of unknown function DUF488 PFAM: protein of unknown function DUF488~KEGG: rfr:Rfer_4130 hypothetical protein gene gene3833 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3781 Alide_3782 Alide_3782 Alide_3782 3934057 3934515 + alkylhydroperoxidase like protein%2C AhpD family KEGG: ote:Oter_3729 alkylhydroperoxidase~TIGRFAM: alkylhydroperoxidase like protein%2C AhpD family~PFAM: Carboxymuconolactone decarboxylase gene gene3834 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3782 Alide_3783 Alide_3783 Alide_3783 3934536 3940370 - excinuclease ABC%2C A subunit TIGRFAM: excinuclease ABC%2C A subunit~PFAM: ABC transporter related~KEGG: ajs:Ajs_3747 UvrA family protein~SMART: AAA ATPase gene gene3835 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3783 Alide_3784 Alide_3784 Alide_3784 3940504 3941616 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: dia:Dtpsy_3029 extracellular ligand-binding receptor gene gene3836 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3784 Alide_3785 Alide_3785 Alide_3785 3941687 3941854 - hypothetical protein KEGG: ajs:Ajs_3750 hypothetical protein gene gene3837 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3785 Alide_3786 Alide_3786 Alide_3786 3942000 3943019 - porin KEGG: ajs:Ajs_3751 porin gene gene3838 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3786 Alide_3787 Alide_3787 Alide_3787 3943222 3944916 - major facilitator superfamily transporter KEGG: ajs:Ajs_3752 major facilitator superfamily transporter gene gene3839 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3787 Alide_3788 Alide_3788 Alide_3788 3945233 3945541 + protein of unknown function DUF485 PFAM: protein of unknown function DUF485~KEGG: dac:Daci_5956 hypothetical protein gene gene3840 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3788 Alide_3789 Alide_3789 Alide_3789 3945538 3947274 + SSS sodium solute transporter superfamily KEGG: rpf:Rpic12D_0449 SSS sodium solute transporter superfamily~TIGRFAM: SSS sodium solute transporter superfamily~PFAM: Na+/solute symporter gene gene3841 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3789 Alide_3790 Alide_3790 Alide_3790 3947398 3948063 - Exonuclease RNase T and DNA polymerase III KEGG: pna:Pnap_0481 DNA polymerase III subunit epsilon~PFAM: Exonuclease RNase T and DNA polymerase III~SMART: Exonuclease gene gene3842 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3790 Alide_3791 Alide_3791 Alide_3791 3948060 3949874 - protein of unknown function DUF294 nucleotidyltransferase KEGG: dac:Daci_5960 CBS domain-containing protein~PFAM: protein of unknown function DUF294 nucleotidyltransferase%3B CBS domain containing protein%3B cyclic nucleotide-binding%3B Domain of unknown function DUF294%2C putative nucleotidyltransferase substrate-binding~SMART: CBS domain containing protein gene gene3843 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3791 Alide_3792 Alide_3792 Alide_3792 3949897 3950538 - DSBA oxidoreductase PFAM: DSBA oxidoreductase~KEGG: dac:Daci_5961 DsbA oxidoreductase gene gene3844 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3792 Alide_3793 Alide_3793 Alide_3793 3950535 3950795 - protein of unknown function DUF1289 PFAM: protein of unknown function DUF1289~KEGG: dia:Dtpsy_3035 protein of unknown function DUF1289 gene gene3845 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3793 Alide_3794 Alide_3794 Alide_3794 3950792 3951286 - YbaK/prolyl-tRNA synthetase associated region protein PFAM: YbaK/prolyl-tRNA synthetase associated region~KEGG: vap:Vapar_4709 YbaK/prolyl-tRNA synthetase associated region gene gene3846 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3794 Alide_3795 Alide_3795 Alide_3795 3951292 3952206 - pyruvate carboxyltransferase PFAM: pyruvate carboxyltransferase~KEGG: ajs:Ajs_3757 hydroxymethylglutaryl-CoA lyase gene gene3847 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3795 Alide_3796 Alide_3796 Alide_3796 3952492 3953412 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~KEGG: dia:Dtpsy_3039 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding gene gene3848 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3796 Alide_3797 Alide_3797 Alide_3797 3953450 3955471 - Carbamoyl-phosphate synthase L chain ATP-binding protein PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B biotin carboxylase domain protein%3B biotin/lipoyl attachment domain-containing protein~KEGG: ajs:Ajs_3759 3-methylcrotonoyl-CoA carboxylase%2C alpha subunit gene gene3849 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3797 Alide_3798 Alide_3798 Alide_3798 3955472 3956191 - putative transmembrane protein KEGG: dia:Dtpsy_3041 putative transmembrane protein gene gene3850 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3798 Alide_3799 Alide_3799 Alide_3799 3956213 3956992 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: ajs:Ajs_3761 enoyl-CoA hydratase gene gene3851 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3799 Alide_3800 Alide_3800 Alide_3800 3957003 3958607 - Methylcrotonoyl-CoA carboxylase KEGG: dia:Dtpsy_3044 propionyl-CoA carboxylase~PFAM: carboxyl transferase gene gene3852 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3800 Alide_3801 Alide_3801 Alide_3801 3958604 3960325 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: dia:Dtpsy_3045 AMP-binding domain protein gene gene3853 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3801 Alide_3802 Alide_3802 Alide_3802 3960471 3961529 + helix-turn-helix- domain containing protein AraC type KEGG: dia:Dtpsy_3046 transcriptional regulator%2C AraC family~PFAM: helix-turn-helix- domain containing protein AraC type~SMART: Helix-turn-helix%2C AraC domain gene gene3854 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3802 Alide_3803 Alide_3803 Alide_3803 3961589 3962254 + Glutathione S-transferase domain protein PFAM: Glutathione S-transferase domain~KEGG: ajs:Ajs_3767 glutathione S-transferase domain-containing protein gene gene3855 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3803 Alide_3804 Alide_3804 Alide_3804 3962342 3963955 + Choline dehydrogenase KEGG: vei:Veis_0287 glucose-methanol-choline oxidoreductase~PFAM: glucose-methanol-choline oxidoreductase%3B GMC oxidoreductase gene gene3856 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3804 Alide_3805 Alide_3805 Alide_3805 3964101 3965300 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: vei:Veis_0291 extracellular ligand-binding receptor gene gene3857 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3805 Alide_3806 Alide_3806 Alide_3806 3965429 3966349 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: vei:Veis_0290 inner-membrane translocator gene gene3858 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3806 Alide_3807 Alide_3807 Alide_3807 3966346 3968160 + ABC transporter related protein KEGG: vei:Veis_0289 ABC transporter related~PFAM: ABC transporter related%3B inner-membrane translocator~SMART: AAA ATPase gene gene3859 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3807 Alide_3808 Alide_3808 Alide_3808 3968150 3968872 + ABC transporter related protein KEGG: vei:Veis_0288 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene3860 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3808 Alide_3809 Alide_3809 Alide_3809 3969040 3970650 + glucose-methanol-choline oxidoreductase PFAM: glucose-methanol-choline oxidoreductase%3B GMC oxidoreductase~KEGG: vei:Veis_0287 glucose-methanol-choline oxidoreductase gene gene3861 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3809 Alide_3810 Alide_3810 Alide_3810 3970661 3972319 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: ajs:Ajs_3769 AMP-dependent synthetase and ligase gene gene3862 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3810 Alide_3811 Alide_3811 Alide_3811 3972349 3973737 - aminotransferase class I and II KEGG: ctt:CtCNB1_3118 transcriptional regulator%2C GntR family~PFAM: aminotransferase class I and II%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene3863 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3811 Alide_3812 Alide_3812 Alide_3812 3973802 3975094 + hydroxymethylglutaryl-CoA reductase%2C degradative KEGG: dac:Daci_0287 hydroxymethylglutaryl-CoA reductase%2C degradative~TIGRFAM: hydroxymethylglutaryl-CoA reductase%2C degradative gene gene3864 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3812 Alide_3813 Alide_3813 Alide_3813 3975154 3975816 - HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 KEGG: dia:Dtpsy_3047 HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase gene gene3865 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3813 Alide_3814 Alide_3814 Alide_3814 3975813 3977852 - diguanylate cyclase TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: GGDEF domain containing protein%3B PAS fold-3 domain protein~KEGG: dia:Dtpsy_3048 diguanylate cyclase with PAS/PAC sensor~SMART: GGDEF domain containing protein gene gene3866 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3814 Alide_3815 Alide_3815 Alide_3815 3977958 3979469 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: dia:Dtpsy_3049 extracellular solute-binding protein family 5 gene gene3867 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3815 Alide_3816 Alide_3816 Alide_3816 3979717 3980508 + hypothetical protein KEGG: rfr:Rfer_2484 hypothetical protein gene gene3868 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3816 Alide_3817 Alide_3817 Alide_3817 3980511 3983471 - diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein~KEGG: rfr:Rfer_2485 diguanylate cyclase/phosphodiesterase~SMART: EAL domain protein%3B GGDEF domain containing protein gene gene3869 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3817 Alide_3818 Alide_3818 Alide_3818 3983604 3983999 - hypothetical protein KEGG: dac:Daci_5982 hypothetical protein gene gene3870 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3818 Alide_3819 Alide_3819 Alide_3819 3983996 3984697 - hypothetical protein KEGG: pna:Pnap_0218 hypothetical protein gene gene3871 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3819 Alide_3820 Alide_3820 Alide_3820 3984791 3985285 + protein of unknown function DUF421 PFAM: protein of unknown function DUF421~KEGG: aav:Aave_4363 hypothetical protein gene gene3872 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3820 Alide_3821 Alide_3821 Alide_3821 3985566 3986381 + regulatory protein IclR PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~KEGG: reh:H16_A2299 IclR family transcriptional regulator gene gene3873 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3821 Alide_3822 Alide_3822 Alide_3822 3986378 3987082 + Dipeptidase E KEGG: aav:Aave_4364 peptidase E~PFAM: peptidase S51 dipeptidase E gene gene3874 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3822 Alide_3823 Alide_3823 Alide_3823 3987113 3988015 + protein of unknown function DUF1177 PFAM: protein of unknown function DUF1177~KEGG: reh:H16_A2301 hypothetical protein gene gene3875 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3823 Alide_3824 Alide_3824 Alide_3824 3988012 3988689 + AroM family protein PFAM: AroM family protein~KEGG: cti:RALTA_A1846 hypothetical protein gene gene3876 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3824 Alide_3825 Alide_3825 Alide_3825 3988724 3989704 + hypothetical protein KEGG: cti:RALTA_A1847 conserved hypothetical protein%2C UPF0065 gene gene3877 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3825 Alide_3826 Alide_3826 Alide_3826 3989714 3990555 - pseudogene gene3878 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3826 Alide_3827 Alide_3827 Alide_3827 3990564 3990938 + pseudogene gene3879 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3827 Alide_3828 Alide_3828 Alide_3828 3991034 3992164 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: ajs:Ajs_3774 acyl-CoA dehydrogenase domain-containing protein gene gene3880 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3828 Alide_3829 Alide_3829 Alide_3829 3992188 3992856 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_3053 short chain dehydrogenase gene gene3881 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3829 Alide_3830 Alide_3830 Alide_3830 3992926 3994116 - acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~KEGG: ctt:CtCNB1_0487 acetyl-CoA acetyltransferase~PFAM: Thiolase-like gene gene3882 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3830 Alide_3831 Alide_3831 Alide_3831 3994113 3995939 - (Isocitrate dehydrogenase (NADP(+))) kinase KEGG: ajs:Ajs_3777 bifunctional isocitrate dehydrogenase kinase/phosphatase protein~PFAM: Isocitrate dehydrogenase kinasephosphatase gene gene3883 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3831 Alide_3832 Alide_3832 Alide_3832 3995992 3996657 - Carbonate dehydratase KEGG: dia:Dtpsy_3056 carbonate dehydratase~PFAM: carbonic anhydrase gene gene3884 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3832 Alide_3833 Alide_3833 Alide_3833 3996711 3997901 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: ajs:Ajs_3779 isovaleryl-CoA dehydrogenase gene gene3885 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3833 Alide_3834 Alide_3834 Alide_3834 3998041 3998448 - Transcription regulator MerR DNA binding protein KEGG: dia:Dtpsy_3058 transcriptional regulator%2C MerR family~PFAM: Transcription regulator MerR DNA binding%3B regulatory protein MerR~SMART: regulatory protein MerR gene gene3886 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3834 Alide_3835 Alide_3835 Alide_3835 4004359 4006245 + ABC transporter related protein KEGG: ajs:Ajs_3785 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene3892 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3835 Alide_3836 Alide_3836 Alide_3836 4006249 4007358 - Protein-glutamate methylesterase PFAM: CheB methylesterase%3B response regulator receiver~KEGG: dia:Dtpsy_3060 response regulator receiver modulated CheB methylesterase~SMART: response regulator receiver gene gene3893 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3836 Alide_3837 Alide_3837 Alide_3837 4007405 4008142 - CheD family protein PFAM: CheD family protein~KEGG: ajs:Ajs_3787 chemoreceptor glutamine deamidase CheD gene gene3894 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3837 Alide_3838 Alide_3838 Alide_3838 4008159 4009073 - Protein-glutamate O-methyltransferase PFAM: MCP methyltransferase CheR-type~KEGG: dia:Dtpsy_3062 MCP methyltransferase%2C CheR-type~SMART: MCP methyltransferase CheR-type gene gene3895 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3838 Alide_3839 Alide_3839 Alide_3839 4009073 4009555 - CheW domain protein KEGG: dia:Dtpsy_3063 CheW protein~PFAM: CheW domain protein~SMART: CheW domain protein gene gene3896 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3839 Alide_3840 Alide_3840 Alide_3840 4009590 4011695 - CheW domain protein KEGG: ajs:Ajs_3790 CheA signal transduction histidine kinases~PFAM: CheW domain protein%3B ATP-binding region ATPase domain protein%3B Signal transducing histidine kinase homodimeric%3B Hpt domain protein~SMART: CheW domain protein%3B Hpt domain protein%3B ATP-binding region ATPase domain protein gene gene3897 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3840 Alide_3841 Alide_3841 Alide_3841 4011752 4012114 - response regulator receiver KEGG: dia:Dtpsy_3065 response regulator receiver protein~PFAM: response regulator receiver~SMART: response regulator receiver gene gene3898 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3841 Alide_3842 Alide_3842 Alide_3842 4012174 4012620 - hypothetical protein KEGG: dia:Dtpsy_3066 hypothetical protein gene gene3899 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3842 Alide_3843 Alide_3843 Alide_3843 4012694 4013815 + ATP-binding region ATPase domain protein KEGG: ajs:Ajs_3793 response regulator receiver sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase dimerisation and phosphoacceptor region%3B response regulator receiver~SMART: response regulator receiver%3B ATP-binding region ATPase domain protein gene gene3900 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3843 Alide_3844 Alide_3844 Alide_3844 4013812 4014441 + response regulator receiver KEGG: dia:Dtpsy_3068 two component transcriptional regulator%2C LuxR family~PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR gene gene3901 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3844 Alide_3845 Alide_3845 Alide_3845 4014526 4015290 - flagellar biosynthetic protein FliR KEGG: ajs:Ajs_3795 flagellar biosynthetic protein FliR~TIGRFAM: flagellar biosynthetic protein FliR~PFAM: type III secretion system inner membrane R protein gene gene3902 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3845 Alide_3846 Alide_3846 Alide_3846 4015287 4015556 - flagellar biosynthetic protein FliQ KEGG: ajs:Ajs_3796 flagellar biosynthetic protein FliQ~TIGRFAM: flagellar biosynthetic protein FliQ~PFAM: export protein FliQ family 3 gene gene3903 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3846 Alide_3847 Alide_3847 Alide_3847 4015567 4016322 - flagellar biosynthetic protein FliP KEGG: ajs:Ajs_3797 flagellar biosynthesis protein FliP~TIGRFAM: flagellar biosynthetic protein FliP~PFAM: type III secretion system inner membrane P protein gene gene3904 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3847 Alide_3848 Alide_3848 Alide_3848 4016315 4016680 - flagellar biosynthesis protein%2C FliO KEGG: ajs:Ajs_3798 flagellar biosynthesis protein%2C FliO gene gene3905 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3848 Alide_3849 Alide_3849 Alide_3849 4016664 4017119 - flagellar motor switch protein FliN KEGG: dia:Dtpsy_3073 flagellar motor switch protein FliN~TIGRFAM: flagellar motor switch protein FliN~PFAM: surface presentation of antigens (SPOA) protein gene gene3906 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3849 Alide_3850 Alide_3850 Alide_3850 4017109 4018113 - flagellar motor switch protein FliM KEGG: dia:Dtpsy_3074 flagellar motor switch protein FliM~TIGRFAM: flagellar motor switch protein FliM~PFAM: flagellar motor switch protein FliM%3B surface presentation of antigens (SPOA) protein gene gene3907 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3850 Alide_3851 Alide_3851 Alide_3851 4018120 4018695 - flagellar basal body-associated protein FliL PFAM: flagellar basal body-associated protein FliL~KEGG: dia:Dtpsy_3075 flagellar basal body-associated protein FliL gene gene3908 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3851 Alide_3852 Alide_3852 Alide_3852 4018861 4020228 - Flagellar hook-length control protein-like%2C C-terminal domain protein PFAM: Flagellar hook-length control protein-like%2C C-terminal domain~KEGG: ajs:Ajs_3802 flagellar hook-length control protein gene gene3909 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3852 Alide_3853 Alide_3853 Alide_3853 4020231 4020695 - flagellar export protein FliJ KEGG: dia:Dtpsy_3077 flagellar export protein FliJ~TIGRFAM: flagellar export protein FliJ~PFAM: flagellar export FliJ family protein gene gene3910 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3853 Alide_3854 Alide_3854 Alide_3854 4020747 4022150 - flagellar protein export ATPase FliI TIGRFAM: flagellar protein export ATPase FliI%3B ATPase%2C FliI/YscN family~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region~KEGG: dia:Dtpsy_3078 ATPase FliI/YscN~SMART: AAA ATPase gene gene3911 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3854 Alide_3855 Alide_3855 Alide_3855 4022140 4022865 - Flagellar assembly protein FliH/Type III secretion system HrpE PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE~KEGG: dia:Dtpsy_3079 flagellar assembly protein FliH gene gene3912 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3855 Alide_3856 Alide_3856 Alide_3856 4022887 4023882 - flagellar motor switch protein FliG KEGG: dia:Dtpsy_3080 flagellar motor switch protein FliG~TIGRFAM: flagellar motor switch protein FliG~PFAM: flagellar motor switch protein FliG gene gene3913 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3856 Alide_3857 Alide_3857 Alide_3857 4023913 4025607 - flagellar M-ring protein FliF KEGG: dia:Dtpsy_3081 flagellar M-ring protein FliF~TIGRFAM: flagellar M-ring protein FliF~PFAM: secretory protein YscJ/FliF family protein%3B Flagellar M-ring domain protein gene gene3914 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3857 Alide_3858 Alide_3858 Alide_3858 4025783 4026094 + flagellar hook-basal body complex subunit FliE KEGG: dia:Dtpsy_3082 flagellar hook-basal body complex subunit FliE~TIGRFAM: flagellar hook-basal body complex subunit FliE~PFAM: flagellar hook-basal body complex protein FliE gene gene3915 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3858 Alide_3859 Alide_3859 Alide_3859 4026310 4026609 - flagellar protein FliT KEGG: dia:Dtpsy_3083 flagellar protein FliT gene gene3916 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3859 Alide_3860 Alide_3860 Alide_3860 4026613 4027053 - flagellar protein FliS KEGG: dia:Dtpsy_3084 flagellar protein FliS~TIGRFAM: flagellar protein FliS~PFAM: flagellar protein FliS gene gene3917 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3860 Alide_3861 Alide_3861 Alide_3861 4027120 4028565 - flagellar hook-associated 2 domain-containing protein PFAM: flagellar hook-associated 2 domain-containing protein%3B flagellar hook-associated protein 2 domain-containing protein%3B flagellin hook IN repeat protein~KEGG: aav:Aave_4399 flagellar hook-associated 2 domain-containing protein gene gene3918 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3861 Alide_3862 Alide_3862 Alide_3862 4028798 4030258 - flagellin domain protein PFAM: flagellin domain protein%3B flagellin hook IN repeat protein~KEGG: aav:Aave_4400 flagellin domain-containing protein gene gene3919 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3862 Alide_3863 Alide_3863 Alide_3863 4030593 4032062 + flagellin domain protein PFAM: flagellin domain protein~KEGG: aav:Aave_4401 flagellin domain-containing protein gene gene3920 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3863 Alide_3864 Alide_3864 Alide_3864 4032224 4037233 - glycosyl transferase family 2 KEGG: psa:PST_1402 hypothetical protein~manually curated~PFAM: glycosyl transferase family 2%3B Capsule polysaccharide biosynthesis protein gene gene3921 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3864 Alide_3865 Alide_3865 Alide_3865 4037233 4038522 - Dimethylmenaquinone methyltransferase PFAM: Dimethylmenaquinone methyltransferase%3B acylneuraminate cytidylyltransferase~KEGG: syd:Syncc9605_2247 demethylmenaquinone methyltransferase-like gene gene3922 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3865 Alide_3866 Alide_3866 Alide_3866 4039117 4039977 + MotA/TolQ/ExbB proton channel PFAM: MotA/TolQ/ExbB proton channel~KEGG: dia:Dtpsy_3088 MotA/TolQ/ExbB proton channel gene gene3923 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3866 Alide_3867 Alide_3867 Alide_3867 4039996 4040934 + OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: dia:Dtpsy_3089 OmpA/MotB domain protein gene gene3924 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3867 Alide_3868 Alide_3868 Alide_3868 4041000 4041386 + response regulator receiver KEGG: dia:Dtpsy_3090 response regulator receiver protein~PFAM: response regulator receiver~SMART: response regulator receiver gene gene3925 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3868 Alide_3869 Alide_3869 Alide_3869 4041389 4042021 + Chemotaxis phosphatase CheZ PFAM: Chemotaxis phosphatase CheZ~KEGG: ajs:Ajs_3818 chemotaxis phosphatase%2C CheZ gene gene3926 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3869 Alide_3870 Alide_3870 Alide_3870 4042118 4043278 + type III secretion exporter PFAM: type III secretion exporter~KEGG: dia:Dtpsy_3092 type III secretion exporter gene gene3927 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3870 Alide_3871 Alide_3871 Alide_3871 4043275 4045365 + flagellar biosynthesis protein FlhA KEGG: dia:Dtpsy_3093 flagellar biosynthesis protein FlhA~TIGRFAM: flagellar biosynthesis protein FlhA~PFAM: type III secretion FHIPEP protein gene gene3928 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3871 Alide_3872 Alide_3872 Alide_3872 4045362 4046924 + flagellar biosynthetic protein FlhF TIGRFAM: flagellar biosynthetic protein FlhF~PFAM: GTP-binding signal recognition particle SRP54 G- domain~KEGG: ajs:Ajs_3821 GTP-binding signal recognition particle~SMART: AAA ATPase gene gene3929 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3872 Alide_3873 Alide_3873 Alide_3873 4046914 4047717 + hypothetical protein KEGG: ajs:Ajs_3822 hypothetical protein gene gene3930 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3873 Alide_3874 Alide_3874 Alide_3874 4047723 4048439 + RNA polymerase sigma factor%2C FliA/WhiG family KEGG: dia:Dtpsy_3096 RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG~TIGRFAM: RNA polymerase sigma factor%2C FliA/WhiG family%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B sigma-70 region 3 domain protein%3B sigma-70 region 4 domain protein gene gene3931 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3874 Alide_3875 Alide_3875 Alide_3875 4048569 4048907 - hypothetical protein KEGG: ajs:Ajs_3824 hypothetical protein gene gene3932 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3875 Alide_3876 Alide_3876 Alide_3876 4048943 4049266 - Anti-sigma-28 factor FlgM family protein KEGG: dia:Dtpsy_3098 anti-sigma-28 factor%2C FlgM~TIGRFAM: Anti-sigma-28 factor FlgM family protein~PFAM: Anti-sigma-28 factor FlgM family protein gene gene3933 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3876 Alide_3877 Alide_3877 Alide_3877 4049360 4050106 - flagella basal body P-ring formation protein FlgA KEGG: dia:Dtpsy_3099 flagella basal body P-ring formation protein FlgA~TIGRFAM: flagella basal body P-ring formation protein FlgA~PFAM: SAF domain protein gene gene3934 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3877 Alide_3878 Alide_3878 Alide_3878 4050289 4050705 + flagellar basal-body rod protein FlgB KEGG: ajs:Ajs_3827 flagellar basal-body rod protein FlgB~TIGRFAM: flagellar basal-body rod protein FlgB~PFAM: flagellar basal body rod protein gene gene3935 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3878 Alide_3879 Alide_3879 Alide_3879 4050717 4051121 + flagellar basal-body rod protein FlgC KEGG: dia:Dtpsy_3101 flagellar basal-body rod protein FlgC~TIGRFAM: flagellar basal-body rod protein FlgC~PFAM: protein of unknown function DUF1078 domain protein%3B flagellar basal body rod protein gene gene3936 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3879 Alide_3880 Alide_3880 Alide_3880 4051137 4051799 + flagellar hook capping protein PFAM: flagellar hook capping protein~KEGG: dia:Dtpsy_3102 flagellar hook capping protein gene gene3937 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3880 Alide_3881 Alide_3881 Alide_3881 4051836 4053116 + flagellar hook-basal body protein KEGG: aav:Aave_4423 hypothetical protein~TIGRFAM: flagellar hook-basal body protein~PFAM: flagellar basal body FlaE domain protein%3B flagellar basal body rod protein%3B protein of unknown function DUF1078 domain protein gene gene3938 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3881 Alide_3882 Alide_3882 Alide_3882 4053142 4053882 + flagellar basal-body rod protein FlgF KEGG: dia:Dtpsy_3104 flagellar basal-body rod protein FlgF~TIGRFAM: flagellar basal-body rod protein FlgF%3B flagellar hook-basal body protein~PFAM: flagellar basal body rod protein gene gene3939 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3882 Alide_3883 Alide_3883 Alide_3883 4053907 4054689 + flagellar basal-body rod protein FlgG KEGG: dia:Dtpsy_3105 flagellar basal-body rod protein FlgG~TIGRFAM: flagellar basal-body rod protein FlgG%3B flagellar hook-basal body protein~PFAM: protein of unknown function DUF1078 domain protein%3B flagellar basal body rod protein gene gene3940 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3883 Alide_3884 Alide_3884 Alide_3884 4054704 4055387 + flagellar L-ring protein PFAM: flagellar L-ring protein~KEGG: aav:Aave_4426 flagellar L-ring protein gene gene3941 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3884 Alide_3885 Alide_3885 Alide_3885 4055582 4056727 + flagellar P-ring protein PFAM: flagellar P-ring protein~KEGG: aav:Aave_4428 flagellar basal body P-ring protein gene gene3942 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3885 Alide_3886 Alide_3886 Alide_3886 4056727 4057665 + flagellar rod assembly protein/muramidase FlgJ TIGRFAM: flagellar rod assembly protein/muramidase FlgJ~PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase%3B Flagellar protein FlgJ-like~KEGG: ajs:Ajs_3836 flagellar rod assembly protein/muramidase FlgJ~SMART: Lysozyme subfamily 2 gene gene3943 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3886 Alide_3887 Alide_3887 Alide_3887 4057677 4059659 + flagellar hook-associated protein FlgK KEGG: dia:Dtpsy_3110 flagellar hook-associated protein FlgK~TIGRFAM: flagellar hook-associated protein FlgK~PFAM: protein of unknown function DUF1078 domain protein%3B flagellar basal body rod protein gene gene3944 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3887 Alide_3888 Alide_3888 Alide_3888 4059661 4060911 + flagellar hook-associated protein 3 KEGG: aav:Aave_4431 flagellar hook-associated protein 3~TIGRFAM: flagellar hook-associated protein 3~PFAM: flagellin domain protein gene gene3945 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3888 Alide_3889 Alide_3889 Alide_3889 4060988 4062202 + Metal-dependent hydrolase HDOD PFAM: Metal-dependent hydrolase HDOD~KEGG: ajs:Ajs_3839 putative signal transduction protein gene gene3946 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3889 Alide_3890 Alide_3890 Alide_3890 4062348 4063343 + 2-nitropropane dioxygenase NPD PFAM: 2-nitropropane dioxygenase NPD~KEGG: ajs:Ajs_3841 2-nitropropane dioxygenase%2C NPD gene gene3947 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3890 Alide_3891 Alide_3891 Alide_3891 4063388 4064827 - regulatory protein GntR HTH KEGG: dia:Dtpsy_3115 transcriptional regulator%2C GntR family with aminotransferase domain~PFAM: regulatory protein GntR HTH%3B aminotransferase class I and II~SMART: regulatory protein GntR HTH gene gene3948 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3891 Alide_3892 Alide_3892 Alide_3892 4064947 4065546 + hypothetical protein KEGG: ajs:Ajs_3843 hypothetical protein gene gene3949 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3892 Alide_3893 Alide_3893 Alide_3893 4065543 4066475 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: vap:Vapar_0746 protein of unknown function DUF6 transmembrane gene gene3950 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3893 Alide_3894 Alide_3894 Alide_3894 4066591 4067772 + aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: ajs:Ajs_3845 GntR family transcriptional regulator gene gene3951 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3894 Alide_3895 Alide_3895 Alide_3895 4067787 4068662 + phenazine biosynthesis protein PhzF family KEGG: dia:Dtpsy_3119 phenazine biosynthesis protein PhzF family~TIGRFAM: phenazine biosynthesis protein PhzF family~PFAM: Phenazine biosynthesis PhzC/PhzF protein gene gene3952 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3895 Alide_3896 Alide_3896 Alide_3896 4068659 4069633 + Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: dia:Dtpsy_3120 hypothetical protein gene gene3953 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3896 Alide_3897 Alide_3897 Alide_3897 4069830 4070918 + hypothetical protein KEGG: dia:Dtpsy_3121 hypothetical protein gene gene3954 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3897 Alide_3898 Alide_3898 Alide_3898 4070944 4072185 + Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: dia:Dtpsy_3122 extracellular ligand-binding receptor gene gene3955 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3898 Alide_3899 Alide_3899 Alide_3899 4072182 4073309 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_3123 short-chain dehydrogenase/reductase SDR gene gene3956 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3899 Alide_3900 Alide_3900 Alide_3900 4073339 4074052 + Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: dia:Dtpsy_3124 phosphoglycerate mutase gene gene3957 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3900 Alide_3901 Alide_3901 Alide_3901 4074043 4075233 - diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~KEGG: pmy:Pmen_1813 diguanylate cyclase~SMART: GGDEF domain containing protein gene gene3958 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3901 Alide_3902 Alide_3902 Alide_3902 4075309 4075812 - nuclear export factor GLE1 PFAM: nuclear export factor GLE1~KEGG: vap:Vapar_4773 protein of unknown function DUF461 gene gene3959 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3902 Alide_3903 Alide_3903 Alide_3903 4075836 4078154 - TonB-dependent receptor PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: ctt:CtCNB1_0607 TonB-dependent receptor gene gene3960 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3903 Alide_3904 Alide_3904 Alide_3904 4078315 4078662 - hypothetical protein KEGG: vap:Vapar_2119 hypothetical protein gene gene3961 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3904 Alide_3905 Alide_3905 Alide_3905 4078758 4079615 - Creatininase PFAM: Creatininase~KEGG: dia:Dtpsy_3125 creatininase gene gene3962 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3905 Alide_3906 Alide_3906 Alide_3906 4079632 4080612 - extra-cytoplasmic solute receptor PFAM: Twin-arginine translocation pathway%2C signal sequence%2C subgroup~KEGG: dac:Daci_0588 hypothetical protein gene gene3963 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3906 Alide_3907 Alide_3907 Alide_3907 4080893 4082995 + Protein-disulfide reductase KEGG: dia:Dtpsy_3127 cytochrome c biogenesis protein transmembrane region~PFAM: cytochrome c biogenesis protein transmembrane region gene gene3964 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3907 Alide_3908 Alide_3908 Alide_3908 4083095 4083628 + alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~KEGG: vap:Vapar_0729 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen gene gene3965 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3908 Alide_3909 Alide_3909 Alide_3909 4083665 4084411 - protein of unknown function DUF81 PFAM: protein of unknown function DUF81~KEGG: har:HEAR3236 hypothetical protein gene gene3966 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3909 Alide_3910 Alide_3910 Alide_3910 4084675 4085703 + Peptidoglycan-binding domain 1 protein PFAM: Peptidoglycan-binding domain 1 protein%3B ErfK/YbiS/YcfS/YnhG family protein~KEGG: bpt:Bpet1138 peptidoglycan binding-like domain-containing protein gene gene3967 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3910 Alide_3911 Alide_3911 Alide_3911 4085746 4086864 + uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase~KEGG: ajs:Ajs_3861 uroporphyrinogen decarboxylase~PFAM: Uroporphyrinogen decarboxylase (URO-D) gene gene3968 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3911 Alide_3912 Alide_3912 Alide_3912 4087481 4089589 + primosomal protein N' TIGRFAM: primosomal protein N'~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~KEGG: dia:Dtpsy_3135 primosomal protein N'~SMART: DEAD-like helicase %3B helicase domain protein gene gene3969 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3912 Alide_3913 Alide_3913 Alide_3913 4089652 4090839 - acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~KEGG: dia:Dtpsy_0032 beta-ketothiolase~PFAM: Thiolase-like gene gene3970 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3913 Alide_3914 Alide_3914 Alide_3914 4090851 4091630 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: dac:Daci_0026 enoyl-CoA hydratase/isomerase gene gene3971 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3914 Alide_3915 Alide_3915 Alide_3915 4091692 4094816 - pseudogene gene3972 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3915 Alide_3916 Alide_3916 Alide_3916 4093267 4094355 - pseudogene gene3973 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3916 Alide_3917 Alide_3917 Alide_3917 4094813 4095634 - ABC transporter related protein KEGG: dac:Daci_0028 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene3974 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3917 Alide_3918 Alide_3918 Alide_3918 4095643 4096824 - Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: dac:Daci_0029 extracellular ligand-binding receptor gene gene3975 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3918 Alide_3919 Alide_3919 Alide_3919 4096836 4097873 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: rfr:Rfer_4064 inner-membrane translocator gene gene3976 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3919 Alide_3920 Alide_3920 Alide_3920 4097873 4098754 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dac:Daci_0031 inner-membrane translocator gene gene3977 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3920 Alide_3921 Alide_3921 Alide_3921 4098751 4099605 - ABC transporter related protein KEGG: dac:Daci_0032 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene3978 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3921 Alide_3922 Alide_3922 Alide_3922 4099739 4100446 + regulatory protein TetR PFAM: regulatory protein TetR~KEGG: dac:Daci_0033 TetR family transcriptional regulator gene gene3979 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3922 Alide_3923 Alide_3923 Alide_3923 4100441 4101445 - Auxin Efflux Carrier PFAM: Auxin Efflux Carrier~KEGG: ajs:Ajs_3864 auxin efflux carrier gene gene3980 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3923 Alide_3924 Alide_3924 Alide_3924 4101548 4103608 + UvrD/REP helicase PFAM: UvrD/REP helicase~KEGG: dia:Dtpsy_3138 UvrD/REP helicase gene gene3981 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3924 Alide_3925 Alide_3925 Alide_3925 4103614 4104039 + hypothetical protein manually curated~KEGG: dia:Dtpsy_3139 hypothetical protein gene gene3982 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3925 Alide_3926 Alide_3926 Alide_3926 4104036 4105205 + Phospholipase A(1) KEGG: dia:Dtpsy_3140 phospholipase A1~PFAM: phospholipase A1 gene gene3983 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3926 Alide_3927 Alide_3927 Alide_3927 4105218 4106345 - protein of unknown function DUF323 PFAM: protein of unknown function DUF323~KEGG: reu:Reut_B4568 hypothetical protein gene gene3984 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3927 Alide_3928 Alide_3928 Alide_3928 4106377 4108176 - sulfatase PFAM: sulfatase~KEGG: pap:PSPA7_3903 arylsulfatase gene gene3985 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3928 Alide_3929 Alide_3929 Alide_3929 4108274 4109215 - Catechol 2%2C3-dioxygenase KEGG: reu:Reut_B4677 catechol 2%2C3-dioxygenase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase gene gene3986 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3929 Alide_3930 Alide_3930 Alide_3930 4109245 4111008 - monooxygenase FAD-binding protein PFAM: monooxygenase FAD-binding~KEGG: reu:Reut_B4679 monooxygenase%2C FAD-binding gene gene3987 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3930 Alide_3931 Alide_3931 Alide_3931 4111048 4111896 - fumarylacetoacetate (FAA) hydrolase PFAM: fumarylacetoacetate (FAA) hydrolase~KEGG: reu:Reut_B4678 5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase gene gene3988 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3931 Alide_3932 Alide_3932 Alide_3932 4111969 4113111 - porin KEGG: vap:Vapar_4252 porin gene gene3989 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3932 Alide_3933 Alide_3933 Alide_3933 4113310 4114008 + GntR domain protein KEGG: reu:Reut_B4680 GntR family transcriptional regulator~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene3990 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3933 Alide_3934 Alide_3934 Alide_3934 4114254 4114640 + hypothetical protein KEGG: dia:Dtpsy_3141 hypothetical protein gene gene3991 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3934 Alide_3935 Alide_3935 Alide_3935 4114718 4115194 - UspA domain-containing protein PFAM: UspA domain-containing protein~KEGG: dia:Dtpsy_3142 UspA domain protein gene gene3992 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3935 Alide_3936 Alide_3936 Alide_3936 4115254 4116426 + queuine tRNA-ribosyltransferase TIGRFAM: queuine tRNA-ribosyltransferase%3B tRNA-guanine transglycosylase%2C various specificities~KEGG: dia:Dtpsy_3143 queuine tRNA-ribosyltransferase~PFAM: Queuine/other tRNA-ribosyltransferase gene gene3993 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3936 Alide_3937 Alide_3937 Alide_3937 4116431 4117474 - hypothetical protein KEGG: dia:Dtpsy_3145 hypothetical protein gene gene3994 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3937 Alide_3938 Alide_3938 Alide_3938 4117597 4118010 + PAS sensor protein TIGRFAM: PAS sensor protein~PFAM: PAS fold domain protein~KEGG: dar:Daro_3803 PAS~SMART: PAS domain containing protein%3B PAC repeat-containing protein gene gene3995 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3938 Alide_3939 Alide_3939 Alide_3939 4118455 4119285 + 6-phosphogluconate dehydrogenase NAD-binding protein PFAM: 6-phosphogluconate dehydrogenase NAD-binding~KEGG: dac:Daci_4431 6-phosphogluconate dehydrogenase NAD-binding gene gene3996 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3939 Alide_3940 Alide_3940 Alide_3940 4119335 4120303 + hypothetical protein KEGG: dac:Daci_4430 hypothetical protein gene gene3997 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3940 Alide_3941 Alide_3941 Alide_3941 4120422 4121402 + hypothetical protein KEGG: dac:Daci_5794 hypothetical protein gene gene3998 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3941 Alide_3942 Alide_3942 Alide_3942 4121456 4122130 + Dimethylmenaquinone methyltransferase PFAM: Dimethylmenaquinone methyltransferase~KEGG: dac:Daci_4429 hypothetical protein gene gene3999 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3942 Alide_3943 Alide_3943 Alide_3943 4122099 4122794 - GntR domain protein KEGG: bpt:Bpet0387 GntR family transcriptional regulator~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene4000 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3943 Alide_3944 Alide_3944 Alide_3944 4122814 4124757 - phospholipid/glycerol acyltransferase KEGG: ajs:Ajs_3878 phospholipid/glycerol acyltransferase~PFAM: phospholipid/glycerol acyltransferase%3B major facilitator superfamily MFS_1~SMART: phospholipid/glycerol acyltransferase gene gene4001 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3944 Alide_3945 Alide_3945 Alide_3945 4124947 4126827 + ATP-dependent metalloprotease FtsH SMART: AAA ATPase~TIGRFAM: ATP-dependent metalloprotease FtsH~KEGG: pna:Pnap_0392 ATP-dependent metalloprotease FtsH~PFAM: AAA ATPase central domain protein%3B peptidase M41 gene gene4002 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3945 Alide_3946 Alide_3946 Alide_3946 4126916 4127482 + phosphoribosyltransferase PFAM: phosphoribosyltransferase~KEGG: tbd:Tbd_0103 transcriptional regulator PyrR%2C putative gene gene4003 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3946 Alide_3947 Alide_3947 Alide_3947 4127479 4128123 + phosphoribosyltransferase PFAM: phosphoribosyltransferase~KEGG: rfr:Rfer_0394 phosphoribosyltransferase gene gene4004 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3947 Alide_3948 Alide_3948 Alide_3948 4128125 4128775 - dienelactone hydrolase KEGG: rfr:Rfer_0395 dienelactone hydrolase gene gene4005 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3948 Alide_3949 Alide_3949 Alide_3949 4128783 4129766 - zinc-binding alcohol dehydrogenase family protein KEGG: azo:azo0111 putative alcohol dehydrogenase~TIGRFAM: zinc-binding alcohol dehydrogenase family protein~PFAM: Alcohol dehydrogenase GroES domain protein gene gene4006 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3949 Alide_3950 Alide_3950 Alide_3950 4129981 4130970 + hypothetical protein KEGG: dia:Dtpsy_3156 hypothetical protein gene gene4007 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3950 Alide_3951 Alide_3951 Alide_3951 4130993 4132459 + monooxygenase FAD-binding protein PFAM: monooxygenase FAD-binding~KEGG: ajs:Ajs_3884 FAD dependent oxidoreductase gene gene4008 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3951 Alide_3952 Alide_3952 Alide_3952 4132456 4133562 + uncharacterized peroxidase-related enzyme KEGG: ajs:Ajs_3885 uncharacterized peroxidase-related enzyme~TIGRFAM: uncharacterized peroxidase-related enzyme%3B alkylhydroperoxidase like protein%2C AhpD family~PFAM: Carboxymuconolactone decarboxylase gene gene4009 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3952 Alide_3953 Alide_3953 Alide_3953 4133622 4134872 - domain of unknown function DUF1745 PFAM: domain of unknown function DUF1745%3B FIST C domain~KEGG: dia:Dtpsy_3160 domain of unknown function DUF1745 gene gene4010 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3953 Alide_3954 Alide_3954 Alide_3954 4134897 4135679 - hypothetical protein KEGG: dia:Dtpsy_3161 hypothetical protein gene gene4011 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3954 Alide_3955 Alide_3955 Alide_3955 4135907 4136338 + histone family protein DNA-binding protein KEGG: dia:Dtpsy_3162 histone family protein DNA-binding protein~PFAM: histone family protein DNA-binding protein~SMART: histone family protein DNA-binding protein gene gene4012 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3955 Alide_3956 Alide_3956 Alide_3956 4136396 4137148 - protein tyrosine/serine phosphatase KEGG: ajs:Ajs_3890 protein tyrosine/serine phosphatase gene gene4013 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3956 Alide_3957 Alide_3957 Alide_3957 4137342 4137731 - ribosomal protein L17 KEGG: dia:Dtpsy_0399 50S ribosomal protein L17~TIGRFAM: ribosomal protein L17~PFAM: ribosomal protein L17 gene gene4015 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3957 Alide_3958 Alide_3958 Alide_3958 4137820 4138815 - DNA-directed RNA polymerase%2C alpha subunit TIGRFAM: DNA-directed RNA polymerase%2C alpha subunit~PFAM: RNA polymerase insert%3B RNA polymerase dimerisation%3B RNA polymerase alpha subunit domain protein~KEGG: dia:Dtpsy_0398 DNA-directed RNA polymerase subunit alpha~SMART: RNA polymerase RpoA/D/Rpb3-type gene gene4016 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3958 Alide_3959 Alide_3959 Alide_3959 4138928 4139602 - ribosomal protein S4 TIGRFAM: ribosomal protein S4~PFAM: ribosomal protein S4%3B RNA-binding S4 domain protein~KEGG: aav:Aave_0625 30S ribosomal protein S4~SMART: RNA-binding S4 domain protein gene gene4017 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3959 Alide_3960 Alide_3960 Alide_3960 4139643 4140047 - 30S ribosomal protein S11 KEGG: aav:Aave_0624 30S ribosomal protein S11~TIGRFAM: 30S ribosomal protein S11~PFAM: ribosomal protein S11 gene gene4018 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3960 Alide_3961 Alide_3961 Alide_3961 4140063 4140428 - 30S ribosomal protein S13 KEGG: dia:Dtpsy_0395 30S ribosomal protein S13~TIGRFAM: 30S ribosomal protein S13~PFAM: ribosomal protein S13 gene gene4019 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3961 Alide_3962 Alide_3962 Alide_3962 4140452 4140565 - ribosomal protein L36 KEGG: ctt:CtCNB1_4432 ribosomal protein L36~TIGRFAM: ribosomal protein L36~PFAM: ribosomal protein L36 gene gene4020 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3962 Alide_3963 Alide_3963 Alide_3963 4140713 4142032 - preprotein translocase%2C SecY subunit manually curated~TIGRFAM: preprotein translocase%2C SecY subunit~KEGG: dia:Dtpsy_0393 preprotein translocase subunit SecY~PFAM: SecY protein gene gene4021 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3963 Alide_3964 Alide_3964 Alide_3964 4142056 4142487 - ribosomal protein L15 TIGRFAM: ribosomal protein L15~KEGG: ctt:CtCNB1_4434 ribosomal protein L15 gene gene4022 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3964 Alide_3965 Alide_3965 Alide_3965 4142498 4142680 - ribosomal protein L30 KEGG: dia:Dtpsy_0391 50S ribosomal protein L30~TIGRFAM: ribosomal protein L30~PFAM: ribosomal protein L30 gene gene4023 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3965 Alide_3966 Alide_3966 Alide_3966 4142693 4143214 - ribosomal protein S5 KEGG: dia:Dtpsy_0390 30S ribosomal protein S5~TIGRFAM: ribosomal protein S5~PFAM: ribosomal protein S5 domain protein%3B Ribosomal protein S5 gene gene4024 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3966 Alide_3967 Alide_3967 Alide_3967 4143230 4143595 - ribosomal protein L18 KEGG: dia:Dtpsy_0389 50S ribosomal protein L18~TIGRFAM: ribosomal protein L18~PFAM: ribosomal protein L18P/L5E gene gene4025 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3967 Alide_3968 Alide_3968 Alide_3968 4143607 4144140 - ribosomal protein L6 KEGG: dia:Dtpsy_0388 50S ribosomal protein L6~TIGRFAM: ribosomal protein L6~PFAM: Ribosomal protein L6%2C alpha-beta domain gene gene4026 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3968 Alide_3969 Alide_3969 Alide_3969 4144165 4144560 - ribosomal protein S8 PFAM: ribosomal protein S8~KEGG: aav:Aave_0615 30S ribosomal protein S8 gene gene4027 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3969 Alide_3970 Alide_3970 Alide_3970 4144582 4144887 - ribosomal protein S14 PFAM: ribosomal protein S14~KEGG: dia:Dtpsy_0386 30S ribosomal protein S14 gene gene4028 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3970 Alide_3971 Alide_3971 Alide_3971 4144897 4145436 - 50S ribosomal protein L5 KEGG: dia:Dtpsy_0385 50S ribosomal protein L5 gene gene4029 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3971 Alide_3972 Alide_3972 Alide_3972 4145446 4145766 - ribosomal protein L24 TIGRFAM: ribosomal protein L24~PFAM: KOW domain protein~KEGG: dia:Dtpsy_0384 50S ribosomal protein L24~SMART: KOW domain protein gene gene4030 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3972 Alide_3973 Alide_3973 Alide_3973 4145777 4146145 - ribosomal protein L14 KEGG: dia:Dtpsy_0383 50S ribosomal protein L14~TIGRFAM: ribosomal protein L14~PFAM: ribosomal protein L14b/L23e gene gene4031 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3973 Alide_3974 Alide_3974 Alide_3974 4146353 4147951 - Glycerol-3-phosphate dehydrogenase KEGG: aav:Aave_0610 FAD dependent oxidoreductase~PFAM: FAD dependent oxidoreductase gene gene4032 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3974 Alide_3975 Alide_3975 Alide_3975 4148074 4148835 + regulatory protein DeoR KEGG: ajs:Ajs_0383 DeoR family transcriptional regulator~PFAM: regulatory protein DeoR~SMART: regulatory protein DeoR%3B regulatory protein Crp gene gene4033 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3975 Alide_3976 Alide_3976 Alide_3976 4148858 4150363 + glycerol kinase KEGG: dia:Dtpsy_0373 glycerol kinase~TIGRFAM: glycerol kinase~PFAM: Carbohydrate kinase%2C FGGY-like gene gene4034 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3976 Alide_3977 Alide_3977 Alide_3977 4150520 4151359 + pyrroline-5-carboxylate reductase TIGRFAM: pyrroline-5-carboxylate reductase~KEGG: dia:Dtpsy_0372 pyrroline-5-carboxylate reductase~PFAM: NADP oxidoreductase coenzyme F420-dependent gene gene4035 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3977 Alide_3978 Alide_3978 Alide_3978 4151459 4153243 + Spore coat protein CotH PFAM: Spore coat protein CotH~KEGG: glo:Glov_2109 spore coat protein CotH gene gene4036 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3978 Alide_3979 Alide_3979 Alide_3979 4153322 4154194 - 4-hydroxybenzoate polyprenyl transferase KEGG: dia:Dtpsy_0371 4-hydroxybenzoate polyprenyl transferase~TIGRFAM: 4-hydroxybenzoate polyprenyl transferase~PFAM: UbiA prenyltransferase gene gene4037 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3979 Alide_3980 Alide_3980 Alide_3980 4154282 4154806 - Ferritin Dps family protein PFAM: Ferritin Dps family protein~KEGG: dia:Dtpsy_0369 ferritin Dps family protein gene gene4038 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3980 Alide_3981 Alide_3981 Alide_3981 4154945 4155910 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dia:Dtpsy_0368 transcriptional regulator%2C LysR family gene gene4039 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3981 Alide_3982 Alide_3982 Alide_3982 4155956 4158073 - ATP-dependent DNA helicase RecG TIGRFAM: ATP-dependent DNA helicase RecG~PFAM: DEAD/DEAH box helicase domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type%3B helicase domain protein~KEGG: ajs:Ajs_0376 ATP-dependent DNA helicase RecG~SMART: DEAD-like helicase %3B helicase domain protein gene gene4040 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3982 Alide_3983 Alide_3983 Alide_3983 4158250 4159515 + metal dependent phosphohydrolase TIGRFAM: metal dependent phophohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~KEGG: dia:Dtpsy_0366 metal dependent phosphohydrolase~SMART: metal-dependent phosphohydrolase HD region gene gene4041 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3983 Alide_3984 Alide_3984 Alide_3984 4159604 4160707 + S-adenosylmethionine/tRNA-ribosyltransferase-isomerase KEGG: dia:Dtpsy_0365 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase~TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase~PFAM: Queuosine biosynthesis protein gene gene4042 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3984 Alide_3985 Alide_3985 Alide_3985 4160855 4161736 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: ajs:Ajs_0373 hypothetical protein gene gene4043 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3985 Alide_3986 Alide_3986 Alide_3986 4161795 4163402 - Gamma-glutamyltransferase KEGG: ctt:CtCNB1_4698 gamma-glutamyltranspeptidase~PFAM: gamma-glutamyltranspeptidase gene gene4044 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3986 Alide_3987 Alide_3987 Alide_3987 4163408 4164370 - hypothetical protein KEGG: vei:Veis_0179 hypothetical protein gene gene4045 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3987 Alide_3988 Alide_3988 Alide_3988 4164497 4165402 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: vei:Veis_0178 LysR family transcriptional regulator gene gene4046 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3988 Alide_3989 Alide_3989 Alide_3989 4165411 4166127 - uracil-DNA glycosylase KEGG: dia:Dtpsy_0363 uracil-DNA glycosylase~TIGRFAM: uracil-DNA glycosylase~PFAM: Uracil-DNA glycosylase superfamily gene gene4047 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3989 Alide_3990 Alide_3990 Alide_3990 4166188 4166988 - Indole-3-glycerol-phosphate synthase KEGG: dia:Dtpsy_0361 indole-3-glycerol-phosphate synthase~PFAM: Indole-3-glycerol phosphate synthase gene gene4048 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3990 Alide_3991 Alide_3991 Alide_3991 4166995 4167147 - hypothetical protein KEGG: ctt:CtCNB1_4464 hypothetical protein gene gene4049 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3991 Alide_3992 Alide_3992 Alide_3992 4167144 4168175 - anthranilate phosphoribosyltransferase TIGRFAM: anthranilate phosphoribosyltransferase~KEGG: dia:Dtpsy_0359 anthranilate phosphoribosyltransferase~PFAM: glycosyl transferase family 3%3B Glycosyl transferase%2C family 3-like gene gene4050 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3992 Alide_3993 Alide_3993 Alide_3993 4168175 4168744 - glutamine amidotransferase of anthranilate synthase KEGG: dia:Dtpsy_0358 anthranilate synthase component II~TIGRFAM: glutamine amidotransferase of anthranilate synthase~PFAM: glutamine amidotransferase class-I gene gene4051 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3993 Alide_3994 Alide_3994 Alide_3994 4169867 4170613 + receptor protein-tyrosine kinase KEGG: bpt:Bpet1027 receptor protein-tyrosine kinase gene gene4052 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3994 Alide_3995 Alide_3995 Alide_3995 4170733 4170945 + Prophage CP4-57 regulatory PFAM: Prophage CP4-57 regulatory~KEGG: ajs:Ajs_1320 phage transcriptional regulator%2C AlpA gene gene4053 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3995 Alide_3996 Alide_3996 Alide_3996 4170988 4171863 + cobyrinic acid a%2Cc-diamide synthase KEGG: ajs:Ajs_1319 cobyrinic acid a%2Cc-diamide synthase gene gene4054 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3996 Alide_3997 Alide_3997 Alide_3997 4171847 4172116 + hypothetical protein KEGG: ajs:Ajs_1318 hypothetical protein gene gene4055 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3997 Alide_3998 Alide_3998 Alide_3998 4172109 4173782 + hypothetical protein KEGG: bpt:Bpet1031 hypothetical protein gene gene4056 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3998 Alide_3999 Alide_3999 Alide_3999 4173797 4174357 + Protein of unknown function DUF2857 PFAM: Protein of unknown function DUF2857~KEGG: rme:Rmet_2293 hypothetical protein gene gene4057 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_3999 Alide_4000 Alide_4000 Alide_4000 4174361 4175593 + hypothetical protein KEGG: bpt:Bpet1033 hypothetical protein gene gene4058 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4000 Alide_4001 Alide_4001 Alide_4001 4176013 4176807 + Domain of unknown function DUF1845 KEGG: bpt:Bpet1034 putative transposon~TIGRFAM: Domain of unknown function DUF1845~PFAM: Domain of unknown function DUF1845 gene gene4059 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4001 Alide_4002 Alide_4002 Alide_4002 4176804 4177331 + Protein of unknown function DUF3158 PFAM: Protein of unknown function DUF3158~KEGG: bpt:Bpet1035 hypothetical protein gene gene4060 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4002 Alide_4003 Alide_4003 Alide_4003 4177405 4177857 + single-strand binding protein/Primosomal replication protein n PFAM: single-strand binding protein/Primosomal replication protein n~KEGG: ajs:Ajs_1446 single-stranded DNA-binding protein gene gene4061 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4003 Alide_4004 Alide_4004 Alide_4004 4178134 4179306 + DNA topoisomerase PFAM: DNA topoisomerase type IA central domain protein%3B TOPRIM domain-containing protein~KEGG: ajs:Ajs_1445 DNA topoisomerase III~SMART: DNA topoisomerase I ATP-binding%3B Toprim sub domain-containing protein gene gene4062 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4004 Alide_4005 Alide_4005 Alide_4005 4179316 4180119 - IstB domain protein ATP-binding protein KEGG: ctt:CtCNB1_3734 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase gene gene4063 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4005 Alide_4006 Alide_4006 Alide_4006 4180109 4181635 - Integrase catalytic region protein PFAM: Integrase catalytic region%3B regulatory protein MerR~KEGG: ctt:CtCNB1_2459 IstA gene gene4064 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4006 Alide_4007 Alide_4007 Alide_4007 4181744 4182091 + hypothetical protein KEGG: rme:Rmet_2326 hypothetical protein gene gene4065 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4007 Alide_4008 Alide_4008 Alide_4008 4182156 4183265 + hypothetical protein KEGG: ajs:Ajs_1420 hypothetical protein gene gene4066 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4008 Alide_4009 Alide_4009 Alide_4009 4183315 4183635 + hypothetical protein KEGG: ajs:Ajs_1419 hypothetical protein gene gene4067 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4009 Alide_4010 Alide_4010 Alide_4010 4183725 4184030 + hypothetical protein KEGG: ajs:Ajs_1286 hypothetical protein gene gene4068 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4010 Alide_4011 Alide_4011 Alide_4011 4184163 4186442 + DEAD-like helicase SMART: DEAD-like helicase~KEGG: rme:Rmet_2330 helicase-like protein gene gene4069 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4011 Alide_4012 Alide_4012 Alide_4012 4186580 4187179 + Integrating conjugative element protein PilL%2C PFGI-1 TIGRFAM: Integrating conjugative element protein PilL%2C PFGI-1~KEGG: pla:Plav_3409 hypothetical protein gene gene4070 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4012 Alide_4013 Alide_4013 Alide_4013 4187176 4187820 + hypothetical protein KEGG: bpt:Bpet1067 hypothetical protein gene gene4071 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4013 Alide_4014 Alide_4014 Alide_4014 4187835 4188560 + hypothetical protein KEGG: bpt:Bpet1068 hypothetical protein gene gene4072 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4014 Alide_4015 Alide_4015 Alide_4015 4188542 4189144 + Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic~KEGG: bpt:Bpet1069 hypothetical protein gene gene4073 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4015 Alide_4016 Alide_4016 Alide_4016 4189141 4189689 + hypothetical protein KEGG: bpt:Bpet1070 hypothetical protein gene gene4074 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4016 Alide_4017 Alide_4017 Alide_4017 4189694 4191886 + hypothetical protein manually curated~KEGG: ajs:Ajs_1274 hypothetical protein gene gene4075 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4017 Alide_4018 Alide_4018 Alide_4018 4191883 4192644 + Integrating conjugative element protein%2C PFL4697%2C membrane TIGRFAM: Integrating conjugative element protein%2C PFL4697%2C membrane~KEGG: dia:Dtpsy_1174 hypothetical protein gene gene4076 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4018 Alide_4019 Alide_4019 Alide_4019 4192743 4193126 + Protein of unknown function%2C RAQPRD PFAM: Protein of unknown function%2C RAQPRD~KEGG: bpt:Bpet1073 hypothetical protein gene gene4077 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4019 Alide_4020 Alide_4020 Alide_4020 4193123 4193356 + hypothetical protein KEGG: ajs:Ajs_1263 hypothetical protein gene gene4078 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4020 Alide_4021 Alide_4021 Alide_4021 4193373 4193732 + hypothetical protein KEGG: bpt:Bpet1075 hypothetical protein gene gene4079 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4021 Alide_4022 Alide_4022 Alide_4022 4193744 4194154 + hypothetical protein KEGG: bpt:Bpet1076 hypothetical protein gene gene4080 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4022 Alide_4023 Alide_4023 Alide_4023 4194151 4194843 + hypothetical protein KEGG: bpt:Bpet1077 hypothetical protein gene gene4081 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4023 Alide_4024 Alide_4024 Alide_4024 4194840 4195754 + putative secreted protein KEGG: dia:Dtpsy_1167 putative secreted protein gene gene4082 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4024 Alide_4025 Alide_4025 Alide_4025 4195744 4197162 + Integrating conjugative element protein%2C PFL4705 TIGRFAM: Integrating conjugative element protein%2C PFL4705~KEGG: bpt:Bpet1079 hypothetical protein gene gene4083 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4025 Alide_4026 Alide_4026 Alide_4026 4197143 4197592 + Conjugative transfer region lipoprotein TIGRFAM: Conjugative transfer region lipoprotein~KEGG: ajs:Ajs_1257 putative secreted protein gene gene4084 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4026 Alide_4027 Alide_4027 Alide_4027 4197592 4200474 + hypothetical protein KEGG: ajs:Ajs_1398 hypothetical protein gene gene4085 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4027 Alide_4028 Alide_4028 Alide_4028 4200499 4201263 + DSBA oxidoreductase PFAM: DSBA oxidoreductase~KEGG: bpt:Bpet1082 hypothetical protein gene gene4086 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4028 Alide_4029 Alide_4029 Alide_4029 4201440 4201934 + DNA repair protein RadC KEGG: bpt:Bpet1083 DNA repair protein RadC-like protein~TIGRFAM: DNA repair protein RadC~PFAM: DNA repair protein RadC gene gene4087 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4029 Alide_4030 Alide_4030 Alide_4030 4202098 4202544 + protein of unknown function DUF1525 KEGG: bpt:Bpet1084 putative secreted protein~TIGRFAM: protein of unknown function DUF1525~PFAM: protein of unknown function DUF1525 gene gene4088 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4030 Alide_4031 Alide_4031 Alide_4031 4202541 4203488 + protein of unknown function DUF1527 KEGG: bpt:Bpet1502 hypothetical protein~TIGRFAM: protein of unknown function DUF1527~PFAM: protein of unknown function DUF1527 gene gene4089 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4031 Alide_4032 Alide_4032 Alide_4032 4203499 4204893 + Integrating conjugative element protein%2C PFL4711 TIGRFAM: Integrating conjugative element protein%2C PFL4711~KEGG: bpt:Bpet1086 hypothetical protein gene gene4090 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4032 Alide_4033 Alide_4033 Alide_4033 4204890 4205237 + hypothetical protein KEGG: bpt:Bpet1504 hypothetical protein gene gene4091 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4033 Alide_4034 Alide_4034 Alide_4034 4205253 4206776 + hypothetical protein KEGG: ajs:Ajs_1391 hypothetical protein gene gene4092 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4034 Alide_4035 Alide_4035 Alide_4035 4206783 4207142 - hypothetical protein KEGG: ajs:Ajs_1390 hypothetical protein gene gene4093 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4035 Alide_4036 Alide_4036 Alide_4036 4207227 4207859 - RES domain protein PFAM: RES domain protein~KEGG: bpt:Bpet1090 hypothetical protein gene gene4094 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4036 Alide_4037 Alide_4037 Alide_4037 4207872 4208498 - hypothetical protein KEGG: ajs:Ajs_1388 hypothetical protein gene gene4095 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4037 Alide_4038 Alide_4038 Alide_4038 4208814 4210676 + Relaxase PFAM: Relaxase%3B protein of unknown function DUF1528~KEGG: har:HEAR2031 hypothetical protein gene gene4096 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4038 Alide_4039 Alide_4039 Alide_4039 4210727 4211209 - hypothetical protein manually curated~KEGG: dds:Ddes_1324 hypothetical protein gene gene4097 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4039 Alide_4040 Alide_4040 Alide_4040 4211255 4211532 - pseudogene gene4098 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4040 Alide_4041 Alide_4041 Alide_4041 4211532 4211738 - pseudogene gene4099 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4041 Alide_4042 Alide_4042 Alide_4042 4211785 4213725 - hypothetical protein KEGG: pla:Plav_3441 hypothetical protein gene gene4100 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4042 Alide_4043 Alide_4043 Alide_4043 4213722 4214756 - hypothetical protein KEGG: pla:Plav_3442 hypothetical protein gene gene4101 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4043 Alide_4044 Alide_4044 Alide_4044 4215033 4216559 + Integrase catalytic region protein PFAM: Integrase catalytic region%3B regulatory protein MerR~KEGG: ctt:CtCNB1_2459 IstA gene gene4102 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4044 Alide_4045 Alide_4045 Alide_4045 4216549 4217352 + IstB domain protein ATP-binding protein KEGG: ctt:CtCNB1_3734 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase gene gene4103 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4045 Alide_4046 Alide_4046 Alide_4046 4217581 4217793 - hypothetical protein KEGG: bpf:BpOF4_15365 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase gene gene4104 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4046 Alide_4047 Alide_4047 Alide_4047 4218240 4219187 - hypothetical protein KEGG: pna:Pnap_4804 hypothetical protein gene gene4105 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4047 Alide_4048 Alide_4048 Alide_4048 4219175 4219723 - RES domain protein PFAM: RES domain protein~KEGG: avn:Avin_32410 hypothetical protein gene gene4106 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4048 Alide_4049 Alide_4049 Alide_4049 4219720 4220091 - hypothetical protein KEGG: avn:Avin_32400 hypothetical protein gene gene4107 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4049 Alide_4050 Alide_4050 Alide_4050 4220406 4220735 - Chorismate mutase%2C type II PFAM: Chorismate mutase%2C type II~KEGG: dia:Dtpsy_0357 chorismate mutase gene gene4108 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4050 Alide_4051 Alide_4051 Alide_4051 4220732 4222231 - anthranilate synthase component I TIGRFAM: anthranilate synthase component I~KEGG: dia:Dtpsy_0356 anthranilate synthase component I~PFAM: Chorismate binding-like%3B Anthranilate synthase component I domain protein gene gene4109 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4051 Alide_4052 Alide_4052 Alide_4052 4222574 4224334 + chemotaxis sensory transducer KEGG: dia:Dtpsy_0354 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein gene gene4110 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4052 Alide_4053 Alide_4053 Alide_4053 4224497 4227262 + diguanylate cyclase TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B histidine kinase HAMP region domain protein%3B PAS fold domain protein~KEGG: slt:Slit_0879 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~SMART: EAL domain protein%3B GGDEF domain containing protein%3B PAS domain containing protein%3B histidine kinase HAMP region domain protein%3B PAC repeat-containing protein gene gene4111 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4053 Alide_4054 Alide_4054 Alide_4054 4227201 4227974 - phosphoglycolate phosphatase KEGG: dia:Dtpsy_0352 phosphoglycolate phosphatase~TIGRFAM: phosphoglycolate phosphatase%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 1%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase gene gene4112 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4054 Alide_4055 Alide_4055 Alide_4055 4228142 4228516 + hypothetical protein KEGG: ajs:Ajs_0362 hypothetical protein gene gene4113 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4055 Alide_4056 Alide_4056 Alide_4056 4228535 4229215 - ribulose-phosphate 3-epimerase TIGRFAM: ribulose-phosphate 3-epimerase~KEGG: dia:Dtpsy_0350 ribulose-phosphate 3-epimerase~PFAM: ribulose-phosphate 3-epimerase gene gene4114 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4056 Alide_4057 Alide_4057 Alide_4057 4229264 4229671 + ApaG domain protein PFAM: ApaG domain protein~KEGG: dia:Dtpsy_0349 ApaG gene gene4115 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4057 Alide_4058 Alide_4058 Alide_4058 4229668 4231656 + site-specific recombinase Gcr PFAM: site-specific recombinase Gcr~KEGG: ajs:Ajs_0359 putative site-specific recombinase transmembrane protein gene gene4116 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4058 Alide_4059 Alide_4059 Alide_4059 4231826 4233091 + sodium/hydrogen exchanger PFAM: sodium/hydrogen exchanger~KEGG: ajs:Ajs_0358 sodium/hydrogen exchanger gene gene4117 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4059 Alide_4060 Alide_4060 Alide_4060 4233081 4234205 + glutamate--cysteine ligase GCS2 PFAM: glutamate--cysteine ligase GCS2~KEGG: dia:Dtpsy_0346 carboxylate-amine ligase gene gene4118 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4060 Alide_4061 Alide_4061 Alide_4061 4234208 4235191 + thiamine-monophosphate kinase TIGRFAM: thiamine-monophosphate kinase~KEGG: ajs:Ajs_0356 thiamine-monophosphate kinase~PFAM: AIR synthase related protein%3B AIR synthase related protein domain protein gene gene4119 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4061 Alide_4062 Alide_4062 Alide_4062 4235179 4235868 - regulatory protein TetR PFAM: regulatory protein TetR~KEGG: bte:BTH_II0441 TetR family transcriptional regulator gene gene4120 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4062 Alide_4063 Alide_4063 Alide_4063 4236027 4237769 + Poly-beta-hydroxybutyrate polymerase domain protein PFAM: Poly-beta-hydroxybutyrate polymerase domain protein%3B alpha/beta hydrolase fold~KEGG: eba:ebA5073 putative poly-beta-hydroxyalkanoate synthase gene gene4121 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4063 Alide_4064 Alide_4064 Alide_4064 4237783 4239255 + RND efflux system%2C outer membrane lipoprotein%2C NodT family KEGG: har:HEAR2593 putative outer membrane transport protein involved in copper (silver) tolerance (CusC)~TIGRFAM: RND efflux system%2C outer membrane lipoprotein%2C NodT family~PFAM: outer membrane efflux protein gene gene4122 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4064 Alide_4065 Alide_4065 Alide_4065 4239252 4240325 + secretion protein HlyD family protein PFAM: secretion protein HlyD family protein~KEGG: har:HEAR2592 putative ABC transport system%2C membrane protein gene gene4123 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4065 Alide_4066 Alide_4066 Alide_4066 4240329 4243076 + ABC transporter related protein KEGG: dac:Daci_0759 ABC transporter related~PFAM: ABC transporter related%3B ABC-2 type transporter~SMART: AAA ATPase gene gene4124 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4066 Alide_4067 Alide_4067 Alide_4067 4243076 4244209 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: dia:Dtpsy_1496 ABC-2 type transporter gene gene4125 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4067 Alide_4068 Alide_4068 Alide_4068 4244228 4245670 + Phosphate acetyltransferase KEGG: rpf:Rpic12D_4426 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase~PFAM: MaoC domain protein dehydratase%3B phosphate acetyl/butaryl transferase gene gene4126 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4068 Alide_4069 Alide_4069 Alide_4069 4245667 4246857 + acetate kinase KEGG: dac:Daci_0754 acetate kinase~TIGRFAM: acetate kinase~PFAM: acetate and butyrate kinase gene gene4127 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4069 Alide_4070 Alide_4070 Alide_4070 4246867 4247394 + phosphatidylglycerophosphatase A PFAM: phosphatidylglycerophosphatase A~KEGG: dia:Dtpsy_0344 phosphatidylglycerophosphatase A gene gene4128 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4070 Alide_4071 Alide_4071 Alide_4071 4247401 4247919 + CinA domain protein PFAM: CinA domain protein~KEGG: ajs:Ajs_0354 CinA domain-containing protein gene gene4129 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4071 Alide_4072 Alide_4072 Alide_4072 4247932 4249566 - chemotaxis sensory transducer KEGG: lch:Lcho_3216 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein gene gene4130 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4072 Alide_4073 Alide_4073 Alide_4073 4249569 4251815 - diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B histidine kinase HAMP region domain protein~KEGG: slt:Slit_1460 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~SMART: EAL domain protein%3B GGDEF domain containing protein%3B histidine kinase HAMP region domain protein gene gene4131 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4073 Alide_4074 Alide_4074 Alide_4074 4252097 4252702 - response regulator receiver KEGG: nhl:Nhal_1312 response regulator receiver~PFAM: response regulator receiver%3B ANTAR domain protein~SMART: response regulator receiver gene gene4132 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4074 Alide_4075 Alide_4075 Alide_4075 4252699 4254213 - PAS sensor protein KEGG: lch:Lcho_2722 putative signal transduction histidine kinase~TIGRFAM: PAS sensor protein~PFAM: histidine kinase dimerisation/phosphoacceptor%3B PAS fold-4 domain protein%3B ATP-binding region ATPase domain protein gene gene4133 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4075 Alide_4076 Alide_4076 Alide_4076 4254438 4255253 - SEC-C motif domain protein PFAM: SEC-C motif domain protein~KEGG: dia:Dtpsy_0342 sec-C motif domain protein gene gene4134 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4076 Alide_4077 Alide_4077 Alide_4077 4255686 4256171 - hypothetical protein KEGG: dia:Dtpsy_0340 hypothetical protein gene gene4135 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4077 Alide_4078 Alide_4078 Alide_4078 4256161 4257429 - rRNA (guanine-N(2)-)-methyltransferase KEGG: ajs:Ajs_0350 putative RNA methylase~PFAM: RNA methylase%3B THUMP domain-containing protein gene gene4136 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4078 Alide_4079 Alide_4079 Alide_4079 4257542 4259365 + chemotaxis sensory transducer KEGG: aav:Aave_0421 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein%3B Cache domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein gene gene4137 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4079 Alide_4080 Alide_4080 Alide_4080 4259367 4259810 - hypothetical protein KEGG: ajs:Ajs_0349 hypothetical protein gene gene4138 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4080 Alide_4081 Alide_4081 Alide_4081 4259824 4261377 - RNA polymerase sigma-54 factor%2C RpoN KEGG: dia:Dtpsy_0337 RNA polymerase%2C sigma 54 subunit%2C RpoN~TIGRFAM: RNA polymerase sigma-54 factor%2C RpoN~PFAM: sigma-54 DNA-binding domain protein%3B sigma-54 factor core-binding region%3B sigma-54 factor gene gene4139 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4081 Alide_4082 Alide_4082 Alide_4082 4261427 4262227 - ABC transporter related protein KEGG: aav:Aave_0418 ABC transporter-related protein~PFAM: ABC transporter related~SMART: AAA ATPase gene gene4140 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4082 Alide_4083 Alide_4083 Alide_4083 4262224 4262868 - lipopolysaccharide transport periplasmic protein LptA KEGG: dia:Dtpsy_0335 lipopolysaccharide transport periplasmic protein LptA~TIGRFAM: lipopolysaccharide transport periplasmic protein LptA~PFAM: OstA family protein gene gene4141 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4083 Alide_4084 Alide_4084 Alide_4084 4262988 4263644 - DSBA oxidoreductase PFAM: DSBA oxidoreductase~KEGG: dia:Dtpsy_0334 DsbA oxidoreductase gene gene4142 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4084 Alide_4085 Alide_4085 Alide_4085 4263724 4264359 - Sporulation domain-containing protein PFAM: Sporulation domain-containing protein~KEGG: dia:Dtpsy_0333 sporulation domain protein gene gene4143 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4085 Alide_4086 Alide_4086 Alide_4086 4264372 4266075 - arginyl-tRNA synthetase TIGRFAM: arginyl-tRNA synthetase~KEGG: ajs:Ajs_0343 arginyl-tRNA synthetase gene gene4144 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4086 Alide_4087 Alide_4087 Alide_4087 4266200 4266526 + PsiF repeat-containing protein PFAM: PsiF repeat-containing protein~KEGG: dia:Dtpsy_0331 PsiF repeat protein gene gene4145 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4087 Alide_4088 Alide_4088 Alide_4088 4266584 4267039 - Protein of unknown function DUF2214%2C membrane PFAM: Protein of unknown function DUF2214%2C membrane~KEGG: ajs:Ajs_0341 putative transmembrane protein gene gene4146 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4088 Alide_4089 Alide_4089 Alide_4089 4267133 4268470 - sodium:dicarboxylate symporter PFAM: sodium:dicarboxylate symporter~KEGG: dac:Daci_2923 sodium:dicarboxylate symporter gene gene4147 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4089 Alide_4090 Alide_4090 Alide_4090 4268671 4271331 + ATP-binding region ATPase domain protein KEGG: dac:Daci_2922 PAS/PAC sensor hybrid histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B PAS fold-4 domain protein%3B response regulator receiver~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B response regulator receiver gene gene4148 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4090 Alide_4091 Alide_4091 Alide_4091 4271397 4272035 - regulatory protein LuxR KEGG: dac:Daci_2921 two component LuxR family transcriptional regulator~PFAM: regulatory protein LuxR%3B response regulator receiver~SMART: regulatory protein LuxR%3B response regulator receiver gene gene4149 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4091 Alide_4092 Alide_4092 Alide_4092 4272049 4272981 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dia:Dtpsy_0328 transcriptional regulator%2C LysR family gene gene4150 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4092 Alide_4093 Alide_4093 Alide_4093 4273216 4275414 + malate synthase G TIGRFAM: malate synthase G~KEGG: dia:Dtpsy_0327 malate synthase G~PFAM: Malate synthase family protein gene gene4151 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4093 Alide_4094 Alide_4094 Alide_4094 4275491 4275775 + hypothetical protein manually curated~KEGG: ajs:Ajs_0337 hypothetical protein gene gene4152 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4094 Alide_4095 Alide_4095 Alide_4095 4275751 4275939 + 4-oxalocrotonate tautomerase family enzyme KEGG: dia:Dtpsy_0325 4-oxalocrotonate tautomerase~TIGRFAM: 4-oxalocrotonate tautomerase family enzyme~PFAM: 4-oxalocrotonate tautomerase gene gene4153 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4095 Alide_4096 Alide_4096 Alide_4096 4275962 4276750 + protein of unknown function DUF169 PFAM: protein of unknown function DUF169~KEGG: bbt:BBta_4610 hypothetical protein gene gene4154 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4096 Alide_4097 Alide_4097 Alide_4097 4276775 4277542 + glutamine amidotransferase class-II PFAM: glutamine amidotransferase class-II~KEGG: ajs:Ajs_0335 glutamine amidotransferase%2C class-II gene gene4155 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4097 Alide_4098 Alide_4098 Alide_4098 4283380 4284399 - glutathione synthetase TIGRFAM: glutathione synthetase~KEGG: dia:Dtpsy_3256 glutathione synthetase~PFAM: glutathione synthetase ATP-binding%3B glutathione synthetase domain protein gene gene4161 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4098 Alide_4099 Alide_4099 Alide_4099 4284359 4285600 - benzoate transporter KEGG: dia:Dtpsy_3257 benzoate transporter~TIGRFAM: benzoate transporter~PFAM: Benzoate membrane transport protein gene gene4162 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4099 Alide_4100 Alide_4100 Alide_4100 4285692 4287620 - potassium transporter PFAM: K potassium transporter~KEGG: dia:Dtpsy_3258 K potassium transporter gene gene4163 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4100 Alide_4101 Alide_4101 Alide_4101 4287657 4289000 - glutamate/cysteine ligase KEGG: dia:Dtpsy_3259 glutamate/cysteine ligase~TIGRFAM: glutamate/cysteine ligase~PFAM: glutamate--cysteine ligase GshA gene gene4164 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4101 Alide_4102 Alide_4102 Alide_4102 4289020 4290486 - cation transporter PFAM: cation transporter~KEGG: dac:Daci_5998 cation transporter gene gene4165 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4102 Alide_4103 Alide_4103 Alide_4103 4290488 4291963 - TrkA-N domain protein PFAM: TrkA-N domain protein%3B TrkA-C domain protein~KEGG: dia:Dtpsy_3261 potassium transporter peripheral membrane component gene gene4166 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4103 Alide_4104 Alide_4104 Alide_4104 4292024 4293358 - gamma-glutamyl phosphate reductase TIGRFAM: gamma-glutamyl phosphate reductase~KEGG: ajs:Ajs_3913 gamma-glutamyl phosphate reductase~PFAM: Aldehyde Dehydrogenase gene gene4167 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4104 Alide_4105 Alide_4105 Alide_4105 4293376 4293711 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase KEGG: pde:Pden_0614 S-adenosylmethionine:tRNA ribosyltransferase-isomerase gene gene4168 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4105 Alide_4106 Alide_4106 Alide_4106 4293653 4294714 - RimK domain protein ATP-grasp KEGG: ank:AnaeK_1753 RimK domain protein ATP-grasp gene gene4169 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4106 Alide_4107 Alide_4107 Alide_4107 4294711 4296054 - peptidase M12A astacin KEGG: cph:Cpha266_0056 peptidase M12A%2C astacin~PFAM: peptidase M12A astacin~SMART: peptidase metallopeptidase gene gene4170 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4107 Alide_4108 Alide_4108 Alide_4108 4296367 4296651 + hypothetical protein KEGG: dia:Dtpsy_3263 hypothetical protein gene gene4171 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4108 Alide_4109 Alide_4109 Alide_4109 4296853 4297932 - DNA polymerase III%2C delta subunit KEGG: dia:Dtpsy_3264 DNA polymerase III subunit delta~TIGRFAM: DNA polymerase III%2C delta subunit~PFAM: DNA polymerase III delta gene gene4172 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4109 Alide_4110 Alide_4110 Alide_4110 4297953 4298465 - Rare lipoprotein B PFAM: Rare lipoprotein B~KEGG: dia:Dtpsy_3265 rare lipoprotein B gene gene4173 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4110 Alide_4111 Alide_4111 Alide_4111 4298465 4301170 - leucyl-tRNA synthetase KEGG: ajs:Ajs_3917 leucyl-tRNA synthetase~TIGRFAM: leucyl-tRNA synthetase gene gene4174 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4111 Alide_4112 Alide_4112 Alide_4112 4301327 4302571 + MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel~KEGG: ajs:Ajs_3919 MscS mechanosensitive ion channel gene gene4175 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4112 Alide_4113 Alide_4113 Alide_4113 4302876 4304402 + Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: bmj:BMULJ_03133 NAD-dependent aldehyde dehydrogenase gene gene4176 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4113 Alide_4114 Alide_4114 Alide_4114 4304485 4305290 + pseudogene gene4177 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4114 Alide_4115 Alide_4115 Alide_4115 4305316 4307289 - sigma-54 factor interaction domain-containing protein KEGG: pna:Pnap_0735 fis family GAF modulated sigma54 specific transcriptional regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B GAF domain protein%3B PAS fold-4 domain protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase gene gene4178 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4115 Alide_4116 Alide_4116 Alide_4116 4307657 4308139 + cytochrome c-type protein KEGG: pna:Pnap_0736 cytochrome c-type protein gene gene4179 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4116 Alide_4117 Alide_4117 Alide_4117 4308554 4311130 + diguanylate cyclase TIGRFAM: diguanylate cyclase%3B PAS sensor protein~PFAM: GGDEF domain containing protein%3B PAS fold domain protein%3B GAF domain protein%3B EAL domain protein~KEGG: bxe:Bxe_C0015 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~SMART: EAL domain protein%3B GGDEF domain containing protein%3B PAS domain containing protein%3B PAC repeat-containing protein%3B GAF domain protein gene gene4180 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4117 Alide_4118 Alide_4118 Alide_4118 4311137 4311556 - Biopolymer transport protein ExbD/TolR PFAM: Biopolymer transport protein ExbD/TolR~KEGG: ajs:Ajs_3920 biopolymer transport protein ExbD/TolR gene gene4181 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4118 Alide_4119 Alide_4119 Alide_4119 4311563 4312216 - MotA/TolQ/ExbB proton channel PFAM: MotA/TolQ/ExbB proton channel~KEGG: dia:Dtpsy_3269 MotA/TolQ/ExbB proton channel gene gene4182 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4119 Alide_4120 Alide_4120 Alide_4120 4312224 4313045 - dihydrodipicolinate reductase TIGRFAM: dihydrodipicolinate reductase~KEGG: ajs:Ajs_3922 dihydrodipicolinate reductase~PFAM: dihydrodipicolinate reductase gene gene4183 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4120 Alide_4121 Alide_4121 Alide_4121 4313100 4313654 - SmpA/OmlA domain-containing protein PFAM: SmpA/OmlA domain-containing protein~KEGG: dia:Dtpsy_3271 SmpA/OmlA domain protein gene gene4184 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4121 Alide_4122 Alide_4122 Alide_4122 4313754 4314173 + ferric-uptake regulator PFAM: ferric-uptake regulator~KEGG: dia:Dtpsy_3272 ferric uptake regulator%2C Fur family gene gene4185 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4122 Alide_4123 Alide_4123 Alide_4123 4314181 4315134 - HPr serine kinase domain-containing protein PFAM: HPr serine kinase domain-containing protein~KEGG: dia:Dtpsy_3273 HPr kinase/phosphorylase gene gene4186 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4123 Alide_4124 Alide_4124 Alide_4124 4315428 4315895 - phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2~KEGG: ajs:Ajs_3926 PTS IIA-like nitrogen-regulatory protein PtsN gene gene4187 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4124 Alide_4125 Alide_4125 Alide_4125 4316036 4316383 - ribosomal subunit interface protein KEGG: dia:Dtpsy_3275 sigma 54 modulation protein/ribosomal protein S30EA~TIGRFAM: ribosomal subunit interface protein~PFAM: sigma 54 modulation protein/ribosomal protein S30EA gene gene4188 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4125 Alide_4126 Alide_4126 Alide_4126 4316706 4317626 + phosphoribosylaminoimidazole-succinocarboxamide synthase TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase~KEGG: dia:Dtpsy_3276 phosphoribosylaminoimidazole-succinocarboxamide synthase~PFAM: SAICAR synthetase gene gene4189 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4126 Alide_4127 Alide_4127 Alide_4127 4317676 4318584 - thioredoxin KEGG: dia:Dtpsy_3279 thioredoxin~TIGRFAM: thioredoxin~PFAM: Thioredoxin domain-containing protein gene gene4190 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4127 Alide_4128 Alide_4128 Alide_4128 4318726 4319223 + phosphoribosylaminoimidazole carboxylase%2C catalytic subunit TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C catalytic subunit~KEGG: dia:Dtpsy_3282 phosphoribosylaminoimidazole carboxylase%2C catalytic subunit~PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase gene gene4191 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4128 Alide_4129 Alide_4129 Alide_4129 4319220 4320389 + phosphoribosylaminoimidazole carboxylase%2C ATPase subunit TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C ATPase subunit~KEGG: dia:Dtpsy_3283 phosphoribosylaminoimidazole carboxylase ATPase subunit~PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp gene gene4192 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4129 Alide_4130 Alide_4130 Alide_4130 4320395 4321393 + Sua5/YciO/YrdC/YwlC family protein KEGG: ajs:Ajs_3936 translation factor SUA5~TIGRFAM: Sua5/YciO/YrdC/YwlC family protein~PFAM: SUA5/yciO/yrdC domain%3B SUA5 domain-containing protein gene gene4193 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4130 Alide_4131 Alide_4131 Alide_4131 4321457 4322413 + lipase KEGG: ajs:Ajs_3937 lipase gene gene4194 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4131 Alide_4132 Alide_4132 Alide_4132 4322571 4323296 - hypothetical protein KEGG: aav:Aave_2743 hypothetical protein gene gene4195 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4132 Alide_4133 Alide_4133 Alide_4133 4323320 4324843 - ATPase KEGG: app:CAP2UW1_2151 ATPase gene gene4196 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4133 Alide_4134 Alide_4134 Alide_4134 4324957 4326534 - hypothetical protein KEGG: pna:Pnap_4127 hypothetical protein gene gene4197 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4134 Alide_4135 Alide_4135 Alide_4135 4326726 4327589 + hypothetical protein KEGG: bbt:BBta_1239 hypothetical protein gene gene4198 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4135 Alide_4136 Alide_4136 Alide_4136 4327555 4327827 - hypothetical protein KEGG: bvi:Bcep1808_0010 hypothetical protein gene gene4199 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4136 Alide_4137 Alide_4137 Alide_4137 4327967 4328263 + hypothetical protein KEGG: ppg:PputGB1_3382 hypothetical protein gene gene4200 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4137 Alide_4138 Alide_4138 Alide_4138 4328257 4328979 + hypothetical protein KEGG: rpf:Rpic12D_2698 hypothetical protein gene gene4201 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4138 Alide_4139 Alide_4139 Alide_4139 4328976 4330280 + transposase KEGG: xac:XAC3233 transposase gene gene4202 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4139 Alide_4140 Alide_4140 Alide_4140 4330411 4331499 + transposase IS4 family protein KEGG: ajs:Ajs_3918 transposase%2C IS4 family protein~manually curated~PFAM: transposase IS4 family protein gene gene4203 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4140 Alide_4141 Alide_4141 Alide_4141 4331512 4331667 + pseudogene gene4204 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4141 Alide_4142 Alide_4142 Alide_4142 4331822 4333528 - hypothetical protein KEGG: aba:Acid345_1066 hypothetical protein gene gene4205 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4142 Alide_4143 Alide_4143 Alide_4143 4333599 4334132 - hypothetical protein KEGG: xac:XAC3234 hypothetical protein gene gene4206 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4143 Alide_4144 Alide_4144 Alide_4144 4334243 4334938 - OmpW family protein PFAM: OmpW family protein~KEGG: pna:Pnap_1827 OmpW family protein gene gene4207 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4144 Alide_4145 Alide_4145 Alide_4145 4334967 4336526 - hypothetical protein KEGG: pna:Pnap_1828 hypothetical protein gene gene4208 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4145 Alide_4146 Alide_4146 Alide_4146 4336629 4338101 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase~KEGG: dia:Dtpsy_3288 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase~PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C gene gene4209 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4146 Alide_4147 Alide_4147 Alide_4147 4338177 4338905 + peptidase M22 glycoprotease PFAM: peptidase M22 glycoprotease~KEGG: ajs:Ajs_3940 peptidase M22%2C glycoprotease gene gene4210 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4147 Alide_4148 Alide_4148 Alide_4148 4338902 4339378 + ribosomal-protein-alanine acetyltransferase KEGG: dia:Dtpsy_3290 ribosomal-protein-alanine acetyltransferase~TIGRFAM: ribosomal-protein-alanine acetyltransferase~PFAM: GCN5-related N-acetyltransferase gene gene4211 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4148 Alide_4149 Alide_4149 Alide_4149 4339524 4340114 + phage SPO1 DNA polymerase-related protein KEGG: dia:Dtpsy_3291 phage SPO1 DNA polymerase-related protein gene gene4212 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4149 Alide_4150 Alide_4150 Alide_4150 4340285 4341271 + magnesium and cobalt transport protein CorA KEGG: dac:Daci_0973 magnesium and cobalt transport protein CorA~TIGRFAM: magnesium and cobalt transport protein CorA~PFAM: Mg2 transporter protein CorA family protein gene gene4213 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4150 Alide_4151 Alide_4151 Alide_4151 4341566 4341775 + hypothetical protein KEGG: dre:554779 odorant receptor%2C family C%2C subfamily 103%2C member 2 gene gene4214 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4151 Alide_4152 Alide_4152 Alide_4152 4342075 4342257 + hypothetical protein KEGG: rle:pRL100018 putative NTP-binding transposase-related protein gene gene4215 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4152 Alide_4153 Alide_4153 Alide_4153 4342326 4343093 - MTA/SAH nucleosidase TIGRFAM: MTA/SAH nucleosidase~KEGG: dia:Dtpsy_3298 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase~PFAM: purine or other phosphorylase family 1 gene gene4216 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4153 Alide_4154 Alide_4154 Alide_4154 4343153 4344829 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: ajs:Ajs_3950 AMP-dependent synthetase and ligase gene gene4217 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4154 Alide_4155 Alide_4155 Alide_4155 4344920 4346332 - NAD(P)(+) transhydrogenase (AB-specific) KEGG: ctt:CtCNB1_0258 NAD(P) transhydrogenase%2C beta subunit~PFAM: NAD(P) transhydrogenase beta subunit gene gene4218 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4155 Alide_4156 Alide_4156 Alide_4156 4346369 4347979 - NAD(P) transhydrogenase%2C alpha subunit KEGG: bpt:Bpet4170 NAD(P) transhydrogenase subunit alpha~TIGRFAM: NAD(P) transhydrogenase%2C alpha subunit~PFAM: alanine dehydrogenase/PNT domain protein gene gene4219 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4156 Alide_4157 Alide_4157 Alide_4157 4348034 4348753 - hypothetical protein KEGG: dia:Dtpsy_3302 hypothetical protein gene gene4220 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4157 Alide_4158 Alide_4158 Alide_4158 4348877 4349941 - fructose-bisphosphate aldolase%2C class II%2C Calvin cycle subtype TIGRFAM: fructose-bisphosphate aldolase%2C class II%2C Calvin cycle subtype%3B ketose-bisphosphate aldolase~KEGG: dia:Dtpsy_3304 fructose-bisphosphate aldolase%2C class II%2C Calvin cycle subtype~PFAM: ketose-bisphosphate aldolase class-II gene gene4221 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4158 Alide_4159 Alide_4159 Alide_4159 4350079 4351521 - pyruvate kinase TIGRFAM: pyruvate kinase~KEGG: dia:Dtpsy_3305 pyruvate kinase~PFAM: Pyruvate kinase barrel%3B Pyruvate kinase alpha/beta gene gene4222 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4159 Alide_4160 Alide_4160 Alide_4160 4351597 4352979 - peptidase M24 PFAM: peptidase M24%3B peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein~KEGG: dia:Dtpsy_3306 peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein gene gene4223 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4160 Alide_4161 Alide_4161 Alide_4161 4353307 4354086 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: dac:Daci_0802 enoyl-CoA hydratase gene gene4224 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4161 Alide_4162 Alide_4162 Alide_4162 4354086 4355057 - hypothetical protein KEGG: dac:Daci_0801 hypothetical protein gene gene4225 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4162 Alide_4163 Alide_4163 Alide_4163 4355058 4356236 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: dac:Daci_0800 L-carnitine dehydratase/bile acid-inducible protein F gene gene4226 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4163 Alide_4164 Alide_4164 Alide_4164 4356247 4357410 - thiolase KEGG: rme:Rmet_5111 thiolase gene gene4227 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4164 Alide_4165 Alide_4165 Alide_4165 4357407 4357808 - protein of unknown function DUF35 PFAM: protein of unknown function DUF35~KEGG: rme:Rmet_5112 hypothetical protein gene gene4228 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4165 Alide_4166 Alide_4166 Alide_4166 4357813 4358820 - extra-cytoplasmic solute receptor KEGG: rme:Rmet_5113 extra-cytoplasmic solute receptor gene gene4229 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4166 Alide_4167 Alide_4167 Alide_4167 4358980 4359888 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: rme:Rmet_5106 LysR family transcriptional regulator gene gene4230 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4167 Alide_4168 Alide_4168 Alide_4168 4359894 4360670 - 4-diphosphocytidyl-2C-methyl-D-erythritol synthase PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase~KEGG: ajs:Ajs_3958 nucleotidyl transferase gene gene4231 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4168 Alide_4169 Alide_4169 Alide_4169 4360745 4362781 + transketolase manually curated~TIGRFAM: transketolase~KEGG: dia:Dtpsy_3309 transketolase~PFAM: Transketolase domain-containing protein%3B Transketolase central region gene gene4232 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4169 Alide_4170 Alide_4170 Alide_4170 4362813 4363814 + glyceraldehyde-3-phosphate dehydrogenase%2C type I TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase%2C type I~KEGG: ajs:Ajs_3960 glyceraldehyde-3-phosphate dehydrogenase~PFAM: Glyceraldehyde 3-phosphate dehydrogenase%2C NAD(P) binding domain%3B Glyceraldehyde 3-phosphate dehydrogenase%2C catalytic domain gene gene4233 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4170 Alide_4171 Alide_4171 Alide_4171 4363976 4364320 - ribosomal subunit interface protein%2C putative KEGG: dia:Dtpsy_3312 ribosomal subunit interface protein%2C putative gene gene4234 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4171 Alide_4172 Alide_4172 Alide_4172 4364494 4365381 + peptidase C26 PFAM: peptidase C26~KEGG: dia:Dtpsy_3313 peptidase C26 gene gene4235 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4172 Alide_4173 Alide_4173 Alide_4173 4365382 4366266 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: pol:Bpro_2148 LysR family transcriptional regulator gene gene4236 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4173 Alide_4174 Alide_4174 Alide_4174 4366387 4367277 + amidohydrolase 2 PFAM: amidohydrolase 2~KEGG: pol:Bpro_2147 amidohydrolase 2 gene gene4237 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4174 Alide_4175 Alide_4175 Alide_4175 4367320 4368150 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: pol:Bpro_2146 short-chain dehydrogenase/reductase SDR gene gene4238 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4175 Alide_4176 Alide_4176 Alide_4176 4368207 4369178 + hypothetical protein KEGG: pol:Bpro_2145 hypothetical protein gene gene4239 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4176 Alide_4177 Alide_4177 Alide_4177 4369202 4369723 + Carboxymuconolactone decarboxylase PFAM: Carboxymuconolactone decarboxylase~KEGG: pol:Bpro_2144 carboxymuconolactone decarboxylase gene gene4240 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4177 Alide_4178 Alide_4178 Alide_4178 4369720 4370433 + hypothetical protein KEGG: pol:Bpro_2143 hypothetical protein gene gene4241 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4178 Alide_4179 Alide_4179 Alide_4179 4370458 4371672 - PepSY-associated TM helix domain-containing protein KEGG: dac:Daci_2267 PepSY-associated TM helix domain-containing protein gene gene4242 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4179 Alide_4180 Alide_4180 Alide_4180 4371672 4373879 - TonB-dependent siderophore receptor KEGG: ctt:CtCNB1_3496 TonB-dependent siderophore receptor~TIGRFAM: TonB-dependent siderophore receptor~PFAM: TonB-dependent receptor plug%3B TonB-dependent receptor gene gene4243 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4180 Alide_4181 Alide_4181 Alide_4181 4374020 4374493 - peptidylprolyl isomerase%2C FKBP-type KEGG: dia:Dtpsy_3314 peptidylprolyl isomerase%2C FKBP-type gene gene4244 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4181 Alide_4182 Alide_4182 Alide_4182 4374548 4375519 - conserved hypothetical protein KEGG: ctt:CtCNB1_4653 TctC gene gene4245 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4182 Alide_4183 Alide_4183 Alide_4183 4375551 4375904 - hypothetical protein KEGG: ctt:CtCNB1_4654 hypothetical protein gene gene4246 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4183 Alide_4184 Alide_4184 Alide_4184 4375923 4377284 - protein of unknown function DUF1446 PFAM: protein of unknown function DUF1446~KEGG: ctt:CtCNB1_4655 NAD-dependent aldehyde dehydrogenase gene gene4247 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4184 Alide_4185 Alide_4185 Alide_4185 4377393 4378283 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: ctt:CtCNB1_4656 transcriptional regulator%2C LysR family gene gene4248 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4185 Alide_4186 Alide_4186 Alide_4186 4378383 4378859 - transcription activator effector binding protein PFAM: transcription activator effector binding~KEGG: aav:Aave_4607 transcription activator%2C effector binding gene gene4249 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4186 Alide_4187 Alide_4187 Alide_4187 4379161 4380216 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: dia:Dtpsy_3318 short-chain dehydrogenase/reductase SDR gene gene4250 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4187 Alide_4188 Alide_4188 Alide_4188 4380313 4380936 - hypothetical protein KEGG: dia:Dtpsy_3319 hypothetical protein gene gene4251 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4188 Alide_4189 Alide_4189 Alide_4189 4380964 4381710 - DTW domain containing protein PFAM: DTW domain containing protein~KEGG: ajs:Ajs_3970 DTW domain-containing protein gene gene4252 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4189 Alide_4190 Alide_4190 Alide_4190 4381888 4382730 + regulatory protein IclR KEGG: ajs:Ajs_3971 IclR family transcriptional regulator~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene4253 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4190 Alide_4191 Alide_4191 Alide_4191 4382727 4383878 + thiolase KEGG: ajs:Ajs_3972 thiolase gene gene4254 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4191 Alide_4192 Alide_4192 Alide_4192 4383881 4384240 + protein of unknown function DUF35 PFAM: protein of unknown function DUF35~KEGG: ajs:Ajs_3973 hypothetical protein gene gene4255 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4192 Alide_4193 Alide_4193 Alide_4193 4384263 4385240 + hypothetical protein KEGG: dia:Dtpsy_3324 hypothetical protein gene gene4256 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4193 Alide_4194 Alide_4194 Alide_4194 4385249 4387336 + CoA-binding domain protein PFAM: CoA-binding domain protein%3B ATP-grasp domain protein~KEGG: dia:Dtpsy_3325 CoA-binding domain protein gene gene4257 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4194 Alide_4195 Alide_4195 Alide_4195 4387385 4388083 - Glutathione S-transferase domain protein PFAM: Glutathione S-transferase domain~KEGG: ajs:Ajs_3976 glutathione S-transferase domain-containing protein gene gene4258 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4195 Alide_4196 Alide_4196 Alide_4196 4388086 4388847 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: ajs:Ajs_3977 3-ketoacyl-(acyl-carrier-protein) reductase gene gene4259 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4196 Alide_4197 Alide_4197 Alide_4197 4388875 4389276 - Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: ajs:Ajs_3978 glyoxalase/bleomycin resistance protein/dioxygenase gene gene4260 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4197 Alide_4198 Alide_4198 Alide_4198 4389321 4392242 - DNA topoisomerase III TIGRFAM: DNA topoisomerase III~PFAM: DNA topoisomerase type IA central domain protein%3B TOPRIM domain-containing protein%3B SWIB/MDM2 domain-containing protein~KEGG: ajs:Ajs_3990 DNA topoisomerase III~SMART: DNA topoisomerase I DNA-binding%3B DNA topoisomerase I ATP-binding%3B Toprim sub domain-containing protein%3B SWIB domain gene gene4261 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4198 Alide_4199 Alide_4199 Alide_4199 4392343 4392894 + nuclear protein SET KEGG: dia:Dtpsy_3340 nuclear protein SET~PFAM: nuclear protein SET~SMART: nuclear protein SET gene gene4262 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4199 Alide_4200 Alide_4200 Alide_4200 4392891 4393721 + biotin/acetyl-CoA-carboxylase ligase KEGG: dia:Dtpsy_3341 biotin/acetyl-CoA-carboxylase ligase~TIGRFAM: biotin/acetyl-CoA-carboxylase ligase~PFAM: biotin/lipoate A/B protein ligase%3B biotin protein ligase domain protein gene gene4263 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4200 Alide_4201 Alide_4201 Alide_4201 4393878 4394549 + Sporulation domain-containing protein PFAM: Sporulation domain-containing protein~KEGG: dia:Dtpsy_3342 sporulation domain protein gene gene4264 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4201 Alide_4202 Alide_4202 Alide_4202 4394557 4395594 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: pna:Pnap_2134 alcohol dehydrogenase gene gene4265 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4202 Alide_4203 Alide_4203 Alide_4203 4395591 4396046 - MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: reu:Reut_B4755 MaoC-like dehydratase gene gene4266 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4203 Alide_4204 Alide_4204 Alide_4204 4396033 4396503 - hypothetical protein KEGG: reu:Reut_B4756 hypothetical protein gene gene4267 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4204 Alide_4205 Alide_4205 Alide_4205 4396514 4397710 - Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: dia:Dtpsy_2466 extracellular ligand-binding receptor gene gene4268 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4205 Alide_4206 Alide_4206 Alide_4206 4397770 4399752 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: bur:Bcep18194_C7155 AMP-dependent synthetase and ligase gene gene4269 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4206 Alide_4207 Alide_4207 Alide_4207 4399884 4400390 + regulatory protein MarR KEGG: vei:Veis_4103 MarR family transcriptional regulator~PFAM: regulatory protein MarR~SMART: regulatory protein MarR gene gene4270 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4207 Alide_4208 Alide_4208 Alide_4208 4400472 4400843 + hypothetical protein KEGG: afw:Anae109_4130 hypothetical protein gene gene4271 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4208 Alide_4209 Alide_4209 Alide_4209 4401111 4401809 + RES domain protein PFAM: RES domain protein~KEGG: azo:azo2874 hypothetical protein gene gene4272 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4209 Alide_4210 Alide_4210 Alide_4210 4401820 4402893 - NAD/NADP octopine/nopaline dehydrogenase PFAM: NAD/NADP octopine/nopaline dehydrogenase%3B Ketopantoate reductase ApbA/PanE domain protein~KEGG: vap:Vapar_0420 NAD/NADP octopine/nopaline dehydrogenase gene gene4273 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4210 Alide_4211 Alide_4211 Alide_4211 4402890 4403918 - hypothetical protein KEGG: vap:Vapar_0421 hypothetical protein gene gene4274 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4211 Alide_4212 Alide_4212 Alide_4212 4403950 4405395 - Two-component sensor kinase domain-containing protein KEGG: dia:Dtpsy_3348 histidine kinase~PFAM: Two-component sensor kinase domain-containing protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene4275 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4212 Alide_4213 Alide_4213 Alide_4213 4405461 4406135 - response regulator receiver KEGG: ajs:Ajs_3999 two component transcriptional regulator~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene4276 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4213 Alide_4214 Alide_4214 Alide_4214 4406263 4407393 - 2-aminoethylphosphonate/pyruvate transaminase KEGG: bcj:BCAL0446 2-aminoethylphosphonate--pyruvate transaminase~TIGRFAM: 2-aminoethylphosphonate/pyruvate transaminase%3B 2-aminoethylphosphonate aminotransferase~PFAM: aminotransferase class V gene gene4277 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4214 Alide_4215 Alide_4215 Alide_4215 4407428 4409161 - 2-aminoethylphosphonate ABC transport system%2C permease protein KEGG: reu:Reut_B5872 binding-protein dependent transport system inner membrane protein~TIGRFAM: 2-aminoethylphosphonate ABC transport system%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component gene gene4278 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4215 Alide_4216 Alide_4216 Alide_4216 4409158 4410291 - 2-aminoethylphosphonate ABC transport system%2C ATP-binding protein component TIGRFAM: 2-aminoethylphosphonate ABC transport system%2C ATP-binding protein component~PFAM: ABC transporter related~KEGG: reu:Reut_B5873 ABC transporter related~SMART: AAA ATPase gene gene4279 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4216 Alide_4217 Alide_4217 Alide_4217 4410369 4411406 - 2-aminoethylphosphonate ABC transport system%2C 1-aminoethylphosphonate-binding protein component KEGG: reu:Reut_B5874 extracellular solute-binding protein~TIGRFAM: 2-aminoethylphosphonate ABC transport system%2C 1-aminoethylphosphonate-binding protein component~PFAM: extracellular solute-binding protein family 1 gene gene4280 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4217 Alide_4218 Alide_4218 Alide_4218 4411549 4412277 + phosphonate utilization associated transcriptional regulator TIGRFAM: phosphonate utilization associated transcriptional regulator~PFAM: GntR domain protein%3B regulatory protein GntR HTH~KEGG: reu:Reut_B5875 GntR family transcriptional regulator~SMART: regulatory protein GntR HTH gene gene4281 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4218 Alide_4219 Alide_4219 Alide_4219 4412279 4413514 + phosphonoacetate hydrolase KEGG: reu:Reut_B5876 type I phosphodiesterase/nucleotide pyrophosphatase~TIGRFAM: phosphonoacetate hydrolase~PFAM: type I phosphodiesterase/nucleotide pyrophosphatase gene gene4282 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4219 Alide_4220 Alide_4220 Alide_4220 4413545 4414993 + phosphonoacetaldehyde dehydrogenase KEGG: cti:RALTA_B0682 NAD+ dependent acetaldehyde dehydrogenase~TIGRFAM: phosphonoacetaldehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase gene gene4283 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4220 Alide_4221 Alide_4221 Alide_4221 4414999 4415538 + phosphonate degradation operons associated HDIG domain protein TIGRFAM: phosphonate degradation operons associated HDIG domain protein~KEGG: vei:Veis_1186 HD phosphohydrolase-like protein gene gene4284 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4221 Alide_4222 Alide_4222 Alide_4222 4415636 4417024 + aminophosphonate oxidoreductase KEGG: bcm:Bcenmc03_3163 aminophosphonate oxidoreductase~TIGRFAM: aminophosphonate oxidoreductase~PFAM: FAD dependent oxidoreductase gene gene4285 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4222 Alide_4223 Alide_4223 Alide_4223 4417163 4418239 - alanine racemase TIGRFAM: alanine racemase~KEGG: tmz:Tmz1t_3995 alanine racemase~PFAM: alanine racemase domain protein gene gene4286 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4223 Alide_4224 Alide_4224 Alide_4224 4418236 4419546 - FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: dac:Daci_3117 D-amino acid dehydrogenase small subunit gene gene4287 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4224 Alide_4225 Alide_4225 Alide_4225 4419673 4420185 + Transcription regulator AsnC-type-like protein KEGG: vap:Vapar_3966 transcriptional regulator%2C AsnC family~PFAM: Transcription regulator AsnC-type-like~SMART: Transcription regulator AsnC-type gene gene4288 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4225 Alide_4226 Alide_4226 Alide_4226 4420170 4420649 - regulatory protein MarR PFAM: regulatory protein MarR~KEGG: ajs:Ajs_4000 MarR family transcriptional regulator gene gene4289 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4226 Alide_4227 Alide_4227 Alide_4227 4420796 4421905 + recA protein TIGRFAM: recA protein~PFAM: RecA domain protein~KEGG: dia:Dtpsy_3351 RecA protein~SMART: AAA ATPase gene gene4290 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4227 Alide_4228 Alide_4228 Alide_4228 4421986 4422444 + regulatory protein RecX KEGG: dia:Dtpsy_3352 regulatory protein RecX gene gene4291 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4228 Alide_4229 Alide_4229 Alide_4229 4422500 4424794 - protein of unknown function DUF1631 PFAM: protein of unknown function DUF1631~KEGG: dia:Dtpsy_3353 hypothetical protein gene gene4292 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4229 Alide_4230 Alide_4230 Alide_4230 4424851 4425804 - protein-export membrane protein SecF KEGG: dia:Dtpsy_3354 preprotein translocase subunit SecF~TIGRFAM: protein-export membrane protein SecF%3B protein-export membrane protein%2C SecD/SecF family~PFAM: SecD/SecF/SecDF export membrane protein gene gene4293 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4230 Alide_4231 Alide_4231 Alide_4231 4425816 4427711 - protein-export membrane protein SecD KEGG: dia:Dtpsy_3355 preprotein translocase subunit SecD~TIGRFAM: protein-export membrane protein SecD%3B protein-export membrane protein%2C SecD/SecF family~PFAM: SecD/SecF/SecDF export membrane protein gene gene4294 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4231 Alide_4232 Alide_4232 Alide_4232 4427794 4428126 - preprotein translocase%2C YajC subunit KEGG: dia:Dtpsy_3356 preprotein translocase%2C YajC subunit~TIGRFAM: preprotein translocase%2C YajC subunit~PFAM: YajC family protein gene gene4295 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4232 Alide_4233 Alide_4233 Alide_4233 4428330 4431947 - Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain protein PFAM: Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain~KEGG: ajs:Ajs_4008 indolepyruvate ferredoxin oxidoreductase gene gene4296 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4233 Alide_4234 Alide_4234 Alide_4234 4432127 4432600 + Transcription regulator AsnC-type-like protein KEGG: dia:Dtpsy_3359 transcriptional regulator%2C AsnC family~PFAM: Transcription regulator AsnC-type-like~SMART: Transcription regulator AsnC-type gene gene4297 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4234 Alide_4235 Alide_4235 Alide_4235 4432742 4434451 + protein of unknown function DUF894 DitE PFAM: protein of unknown function DUF894 DitE~KEGG: dia:Dtpsy_3362 protein of unknown function DUF894 DitE gene gene4298 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4235 Alide_4236 Alide_4236 Alide_4236 4434560 4435663 - MltA domain protein PFAM: MltA domain protein%3B 3D domain-containing protein~KEGG: dia:Dtpsy_3363 MltA domain protein gene gene4299 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4236 Alide_4237 Alide_4237 Alide_4237 4435692 4435814 + hypothetical protein KEGG: adg:Adeg_1325 hypothetical protein gene gene4300 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4237 Alide_4238 Alide_4238 Alide_4238 4435942 4436586 + OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: dia:Dtpsy_3364 OmpA/MotB domain protein gene gene4301 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4238 Alide_4239 Alide_4239 Alide_4239 4436644 4437279 - response regulator receiver KEGG: ajs:Ajs_4015 response regulator receiver protein~PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR gene gene4302 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4239 Alide_4240 Alide_4240 Alide_4240 4437279 4439372 - PAS sensor protein TIGRFAM: PAS sensor protein~PFAM: ATP-binding region ATPase domain protein%3B PAS fold domain protein%3B histidine kinase A domain protein~KEGG: dia:Dtpsy_3366 PAS/PAC sensor signal transduction histidine kinase~SMART: ATP-binding region ATPase domain protein%3B PAS domain containing protein%3B PAC repeat-containing protein%3B histidine kinase A domain protein gene gene4303 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4240 Alide_4241 Alide_4241 Alide_4241 4439396 4440211 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~KEGG: dia:Dtpsy_3367 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase gene gene4304 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4241 Alide_4242 Alide_4242 Alide_4242 4440208 4444278 - hypothetical protein KEGG: dia:Dtpsy_3368 hypothetical protein gene gene4305 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4242 Alide_4243 Alide_4243 Alide_4243 4444372 4447119 + (Glutamate--ammonia-ligase) adenylyltransferase KEGG: dia:Dtpsy_3369 (glutamate--ammonia-ligase) adenylyltransferase~PFAM: GlnD PII-uridylyltransferase%3B glutamate-ammonia ligase adenylyltransferase gene gene4306 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4243 Alide_4244 Alide_4244 Alide_4244 4447348 4448490 + efflux transporter%2C RND family%2C MFP subunit KEGG: dia:Dtpsy_3372 efflux transporter%2C RND family%2C MFP subunit~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein gene gene4307 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4244 Alide_4245 Alide_4245 Alide_4245 4448503 4451562 + acriflavin resistance protein PFAM: acriflavin resistance protein~KEGG: ajs:Ajs_4023 acriflavin resistance protein gene gene4308 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4245 Alide_4246 Alide_4246 Alide_4246 4451956 4452570 - Glutathione S-transferase domain protein PFAM: Glutathione S-transferase domain~KEGG: dia:Dtpsy_3375 glutathione S-transferase domain protein gene gene4309 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4246 Alide_4247 Alide_4247 Alide_4247 4452683 4454062 + adenylosuccinate lyase KEGG: dia:Dtpsy_3376 adenylosuccinate lyase~TIGRFAM: adenylosuccinate lyase~PFAM: Adenylosuccinate lyase domain-containing protein%3B fumarate lyase gene gene4310 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4247 Alide_4248 Alide_4248 Alide_4248 4454132 4454692 + YaeQ family protein PFAM: YaeQ family protein~KEGG: dia:Dtpsy_3377 YaeQ family protein gene gene4311 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4248 Alide_4249 Alide_4249 Alide_4249 4454963 4455268 - hypothetical protein KEGG: dia:Dtpsy_3378 hypothetical protein gene gene4312 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4249 Alide_4250 Alide_4250 Alide_4250 4455309 4455713 - protein of unknown function DUF1289 PFAM: protein of unknown function DUF1289~KEGG: dia:Dtpsy_3379 protein of unknown function DUF1289 gene gene4313 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4250 Alide_4251 Alide_4251 Alide_4251 4456121 4456858 + Integral membrane protein TerC PFAM: Integral membrane protein TerC~KEGG: ajs:Ajs_4030 integral membrane protein TerC gene gene4314 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4251 Alide_4252 Alide_4252 Alide_4252 4456893 4457363 + hypothetical protein KEGG: ajs:Ajs_4031 hypothetical protein gene gene4315 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4252 Alide_4253 Alide_4253 Alide_4253 4457365 4458285 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: rme:Rmet_4070 LysR family transcriptional regulator gene gene4316 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4253 Alide_4254 Alide_4254 Alide_4254 4458325 4458699 - hypothetical protein KEGG: dia:Dtpsy_2869 hypothetical protein gene gene4317 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4254 Alide_4255 Alide_4255 Alide_4255 4458675 4459642 - pseudogene gene4318 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4255 Alide_4256 Alide_4256 Alide_4256 4459801 4460157 + membrane protein of unknown function PFAM: membrane protein of unknown function~KEGG: dia:Dtpsy_3382 membrane protein of unknown function gene gene4319 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4256 Alide_4257 Alide_4257 Alide_4257 4460125 4461651 - peptidase M48 Ste24p PFAM: peptidase M48 Ste24p~KEGG: dia:Dtpsy_3383 peptidase M48 Ste24p gene gene4320 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4257 Alide_4258 Alide_4258 Alide_4258 4461801 4462286 + molybdenum cofactor biosynthesis protein C KEGG: ajs:Ajs_4034 GTP cyclohydrolase subunit MoaC~TIGRFAM: molybdenum cofactor biosynthesis protein C~PFAM: molybdopterin cofactor biosynthesis protein MoaC gene gene4321 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4258 Alide_4259 Alide_4259 Alide_4259 4462424 4463215 - fimbrial assembly protein%2C FimB KEGG: pna:Pnap_3943 FimB gene gene4322 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4259 Alide_4260 Alide_4260 Alide_4260 4463310 4463879 - type IV pilin structural subunit KEGG: pau:PA14_58730 type IV pilin structural subunit gene gene4323 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4260 Alide_4261 Alide_4261 Alide_4261 4464181 4464969 - cyclic-AMP phosphodiesterase KEGG: pol:Bpro_4676 cyclic-AMP phosphodiesterase gene gene4324 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4261 Alide_4262 Alide_4262 Alide_4262 4465037 4465663 - Forkhead-associated protein KEGG: ajs:Ajs_4043 FHA domain-containing protein~PFAM: Forkhead-associated protein~SMART: Forkhead-associated protein gene gene4325 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4262 Alide_4263 Alide_4263 Alide_4263 4465725 4466531 - Protein phosphatase 2C-like protein KEGG: ajs:Ajs_4044 protein phosphatase 2C domain-containing protein~PFAM: Protein phosphatase 2C-like~SMART: protein phosphatase 2C domain protein gene gene4326 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4263 Alide_4264 Alide_4264 Alide_4264 4466758 4467441 - Integral membrane protein TerC PFAM: Integral membrane protein TerC~KEGG: ajs:Ajs_4045 integral membrane protein TerC gene gene4327 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4264 Alide_4265 Alide_4265 Alide_4265 4467583 4468476 - succinyl-CoA synthetase%2C alpha subunit KEGG: dia:Dtpsy_3391 succinyl-CoA synthetase subunit alpha~TIGRFAM: succinyl-CoA synthetase%2C alpha subunit~PFAM: ATP-citrate lyase/succinyl-CoA ligase%3B CoA-binding domain protein gene gene4328 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4265 Alide_4266 Alide_4266 Alide_4266 4468498 4469658 - succinyl-CoA synthetase%2C beta subunit TIGRFAM: succinyl-CoA synthetase%2C beta subunit~KEGG: dia:Dtpsy_3392 succinyl-CoA synthetase subunit beta~PFAM: ATP-grasp domain protein%3B ATP-citrate lyase/succinyl-CoA ligase gene gene4329 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4266 Alide_4267 Alide_4267 Alide_4267 4469833 4470765 + N-acetyl-gamma-glutamyl-phosphate reductase TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase~KEGG: dia:Dtpsy_3393 N-acetyl-gamma-glutamyl-phosphate reductase~PFAM: Semialdehyde dehydrogenase NAD - binding gene gene4330 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4267 Alide_4268 Alide_4268 Alide_4268 4470874 4472013 - DNA protecting protein DprA KEGG: ajs:Ajs_4049 fis family transcriptional regulator~TIGRFAM: DNA protecting protein DprA~PFAM: SMF family protein gene gene4331 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4268 Alide_4269 Alide_4269 Alide_4269 4472037 4473251 - Peptidoglycan-binding lysin domain protein KEGG: ajs:Ajs_4050 peptidoglycan-binding LysM~PFAM: Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding LysM gene gene4332 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4269 Alide_4270 Alide_4270 Alide_4270 4473451 4473966 + peptide deformylase KEGG: dia:Dtpsy_3396 peptide deformylase~TIGRFAM: peptide deformylase~PFAM: formylmethionine deformylase gene gene4333 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4270 Alide_4271 Alide_4271 Alide_4271 4473963 4474448 + putative lipoprotein transmembrane KEGG: ajs:Ajs_4052 putative lipoprotein transmembrane gene gene4334 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4271 Alide_4272 Alide_4272 Alide_4272 4474459 4475514 + methionyl-tRNA formyltransferase KEGG: ajs:Ajs_4053 methionyl-tRNA formyltransferase~TIGRFAM: methionyl-tRNA formyltransferase~PFAM: formyl transferase domain protein gene gene4335 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4272 Alide_4273 Alide_4273 Alide_4273 4475511 4476260 + AzlC family protein PFAM: AzlC family protein~KEGG: ajs:Ajs_4054 AzlC family protein gene gene4336 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4273 Alide_4274 Alide_4274 Alide_4274 4476257 4476592 + branched-chain amino acid transport PFAM: branched-chain amino acid transport~KEGG: dia:Dtpsy_3400 branched-chain amino acid transport gene gene4337 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4274 Alide_4275 Alide_4275 Alide_4275 4476663 4477856 + Phosphoglycerate kinase KEGG: dia:Dtpsy_3401 phosphoglycerate kinase~PFAM: phosphoglycerate kinase gene gene4338 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4275 Alide_4276 Alide_4276 Alide_4276 4478016 4478702 + hypothetical protein KEGG: dac:Daci_0827 hypothetical protein gene gene4339 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4276 Alide_4277 Alide_4277 Alide_4277 4478699 4479253 + hypothetical protein KEGG: dac:Daci_0826 hypothetical protein gene gene4340 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4277 Alide_4278 Alide_4278 Alide_4278 4479367 4480248 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: dia:Dtpsy_3402 protein of unknown function DUF6 transmembrane gene gene4341 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4278 Alide_4279 Alide_4279 Alide_4279 4480298 4481122 + orotidine 5'-phosphate decarboxylase TIGRFAM: orotidine 5'-phosphate decarboxylase~KEGG: dia:Dtpsy_3403 orotidine 5'-phosphate decarboxylase~PFAM: Orotidine 5'-phosphate decarboxylase gene gene4342 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4279 Alide_4280 Alide_4280 Alide_4280 4481139 4482035 + regulatory protein LysR PFAM: regulatory protein LysR%3B LysR substrate-binding~KEGG: dia:Dtpsy_3404 transcriptional regulator%2C LysR family gene gene4343 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4280 Alide_4281 Alide_4281 Alide_4281 4482155 4483147 + hypothetical protein KEGG: ajs:Ajs_4060 hypothetical protein gene gene4344 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4281 Alide_4282 Alide_4282 Alide_4282 4483144 4484118 + hypothetical protein KEGG: dia:Dtpsy_3406 hypothetical protein gene gene4345 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4282 Alide_4283 Alide_4283 Alide_4283 4484248 4486215 + chemotaxis sensory transducer KEGG: aav:Aave_4703 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein gene gene4346 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4283 Alide_4284 Alide_4284 Alide_4284 4486250 4489318 - excinuclease ABC%2C A subunit KEGG: dia:Dtpsy_3409 excinuclease ABC%2C A subunit~TIGRFAM: excinuclease ABC%2C A subunit~PFAM: ABC transporter related gene gene4347 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4284 Alide_4285 Alide_4285 Alide_4285 4489501 4490679 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ajs:Ajs_4065 major facilitator superfamily transporter gene gene4348 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4285 Alide_4286 Alide_4286 Alide_4286 4490822 4491355 + single-strand binding protein KEGG: ajs:Ajs_4066 single-strand binding protein~TIGRFAM: single-strand binding protein~PFAM: single-strand binding protein/Primosomal replication protein n gene gene4349 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4286 Alide_4287 Alide_4287 Alide_4287 4491490 4492338 + regulatory protein IclR KEGG: bbr:BB4747 transcriptional regulator~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene4350 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4287 Alide_4288 Alide_4288 Alide_4288 4492348 4493529 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: bbr:BB4746 hypothetical protein gene gene4351 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4288 Alide_4289 Alide_4289 Alide_4289 4493540 4494523 - hypothetical protein KEGG: bbr:BB4754 hypothetical protein gene gene4352 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4289 Alide_4290 Alide_4290 Alide_4290 4494558 4495001 - thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: bbr:BB4745 hypothetical protein gene gene4353 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4290 Alide_4291 Alide_4291 Alide_4291 4495017 4495994 - hypothetical protein KEGG: bbr:BB4749 hypothetical protein gene gene4354 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4291 Alide_4292 Alide_4292 Alide_4292 4496026 4496793 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: bbr:BB4750 short chain dehyrogenase gene gene4355 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4292 Alide_4293 Alide_4293 Alide_4293 4496823 4497305 - MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: bbr:BB4751 hypothetical protein gene gene4356 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4293 Alide_4294 Alide_4294 Alide_4294 4497326 4498474 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: bbr:BB4752 acyl-CoA dehydrogenase gene gene4357 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4294 Alide_4295 Alide_4295 Alide_4295 4498482 4499726 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: bbr:BB4753 hypothetical protein gene gene4358 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4295 Alide_4296 Alide_4296 Alide_4296 4499931 4500713 + 2-ketocyclohexanecarboxyl-CoA hydrolase KEGG: reu:Reut_C6107 1%2C4-dihydroxy-2-naphthoate synthase~TIGRFAM: 2-ketocyclohexanecarboxyl-CoA hydrolase~PFAM: Enoyl-CoA hydratase/isomerase gene gene4359 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4296 Alide_4297 Alide_4297 Alide_4297 4500874 4502535 - L-lactate transport KEGG: ajs:Ajs_4067 L-lactate transport~TIGRFAM: L-lactate transport~PFAM: L-lactate permease gene gene4360 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4297 Alide_4298 Alide_4298 Alide_4298 4502775 4503896 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase~KEGG: dia:Dtpsy_3413 tRNA-specific 2-thiouridylase MnmA gene gene4361 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4298 Alide_4299 Alide_4299 Alide_4299 4503893 4504834 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: vei:Veis_0298 LysR family transcriptional regulator gene gene4362 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4299 Alide_4300 Alide_4300 Alide_4300 4504938 4506026 + protein of unknown function DUF453 PFAM: protein of unknown function DUF453~KEGG: vei:Veis_0299 hypothetical protein gene gene4363 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4300 Alide_4301 Alide_4301 Alide_4301 4506079 4507068 + hypothetical protein KEGG: vei:Veis_0300 hypothetical protein gene gene4364 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4301 Alide_4302 Alide_4302 Alide_4302 4507090 4508175 + porin Gram-negative type PFAM: porin Gram-negative type~KEGG: vei:Veis_0301 porin gene gene4365 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4302 Alide_4303 Alide_4303 Alide_4303 4508253 4509197 + LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: pna:Pnap_3816 LysR family transcriptional regulator gene gene4366 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4303 Alide_4304 Alide_4304 Alide_4304 4509435 4510871 + precorrin 3B synthase CobZ KEGG: dia:Dtpsy_3415 tricarballylate dehydrogenase~TIGRFAM: precorrin 3B synthase CobZ~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein gene gene4367 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4304 Alide_4305 Alide_4305 Alide_4305 4510858 4512045 + CitB domain protein TIGRFAM: CitB domain protein~KEGG: ajs:Ajs_4071 CitB domain-containing protein gene gene4368 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4305 Alide_4306 Alide_4306 Alide_4306 4512131 4513108 + hypothetical protein KEGG: dia:Dtpsy_3417 hypothetical protein gene gene4369 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4306 Alide_4307 Alide_4307 Alide_4307 4513151 4514827 - sigma-54 factor interaction domain-containing protein KEGG: dia:Dtpsy_3418 sigma54 specific transcriptional regulator%2C fis family~PFAM: sigma-54 factor interaction domain-containing protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase gene gene4370 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4307 Alide_4308 Alide_4308 Alide_4308 4514989 4516536 + carboxyl transferase PFAM: carboxyl transferase~KEGG: dia:Dtpsy_3419 propionyl-CoA carboxylase gene gene4371 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4308 Alide_4309 Alide_4309 Alide_4309 4516566 4517576 + hypothetical protein KEGG: dac:Daci_1098 hypothetical protein gene gene4372 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4309 Alide_4310 Alide_4310 Alide_4310 4517586 4519664 + CoA-binding domain protein PFAM: CoA-binding domain protein~KEGG: dia:Dtpsy_3421 CoA-binding domain protein gene gene4373 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4310 Alide_4311 Alide_4311 Alide_4311 4519661 4521028 + Biotin carboxylase KEGG: dac:Daci_1096 carbamoyl-phosphate synthase L chain ATP-binding~PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B biotin carboxylase domain protein gene gene4374 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4311 Alide_4312 Alide_4312 Alide_4312 4521040 4521252 + biotin/lipoyl attachment domain-containing protein PFAM: biotin/lipoyl attachment domain-containing protein~KEGG: dia:Dtpsy_3423 biotin/lipoyl attachment domain-containing protein gene gene4375 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4312 Alide_4313 Alide_4313 Alide_4313 4521249 4521683 + thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: dia:Dtpsy_3424 thioesterase superfamily protein gene gene4376 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4313 Alide_4314 Alide_4314 Alide_4314 4521710 4522195 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: dia:Dtpsy_3425 NUDIX hydrolase gene gene4377 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4314 Alide_4315 Alide_4315 Alide_4315 4522292 4522675 + hypothetical protein KEGG: dia:Dtpsy_3426 hypothetical protein gene gene4378 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4315 Alide_4316 Alide_4316 Alide_4316 4522785 4524902 + TonB-dependent copper receptor KEGG: ajs:Ajs_4075 TonB-dependent copper receptor~TIGRFAM: TonB-dependent copper receptor~PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug gene gene4379 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4316 Alide_4317 Alide_4317 Alide_4317 4525122 4525586 + thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: met:M446_5737 thioesterase superfamily protein gene gene4380 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4317 Alide_4318 Alide_4318 Alide_4318 4525636 4526514 + regulatory protein IclR KEGG: bxe:Bxe_C0866 IclR family transcriptional regulator~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene4381 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4318 Alide_4319 Alide_4319 Alide_4319 4526549 4527526 - hypothetical protein KEGG: aav:Aave_3937 hypothetical protein gene gene4382 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4319 Alide_4320 Alide_4320 Alide_4320 4527562 4528755 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: rpf:Rpic12D_1541 L-carnitine dehydratase/bile acid-inducible protein F gene gene4383 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4320 Alide_4321 Alide_4321 Alide_4321 4528757 4529896 - hypothetical protein KEGG: pzu:PHZ_c2530 hypothetical protein gene gene4384 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4321 Alide_4322 Alide_4322 Alide_4322 4529936 4531486 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: gka:GK2759 acetyl-CoA synthetase (acetate-CoA ligase) gene gene4385 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4322 Alide_4323 Alide_4323 Alide_4323 4531733 4532440 - riboflavin synthase%2C alpha subunit TIGRFAM: riboflavin synthase%2C alpha subunit~KEGG: ajs:Ajs_4077 riboflavin synthase subunit alpha~PFAM: Lumazine-binding protein gene gene4386 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4323 Alide_4324 Alide_4324 Alide_4324 4532570 4533184 + Lysine exporter protein (LYSE/YGGA) PFAM: Lysine exporter protein (LYSE/YGGA)~KEGG: bav:BAV2734 amino acid efflux protein gene gene4387 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4324 Alide_4325 Alide_4325 Alide_4325 4533191 4534564 - ATP-binding region ATPase domain protein KEGG: ajs:Ajs_4082 integral membrane sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein gene gene4388 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4325 Alide_4326 Alide_4326 Alide_4326 4534817 4535494 - response regulator receiver KEGG: dia:Dtpsy_3431 two component transcriptional regulator%2C winged helix family~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene4389 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4326 Alide_4327 Alide_4327 Alide_4327 4535494 4535811 - Propeptide PepSY amd peptidase M4 PFAM: Propeptide PepSY amd peptidase M4~KEGG: dia:Dtpsy_3432 propeptide PepSY amd peptidase M4 gene gene4390 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4327 Alide_4328 Alide_4328 Alide_4328 4535950 4536261 + hypothetical protein KEGG: bpt:Bpet0098 hypothetical protein gene gene4391 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4328 Alide_4329 Alide_4329 Alide_4329 4536295 4537677 + Ferric reductase domain protein transmembrane component domain protein PFAM: Ferric reductase domain protein transmembrane component domain%3B Oxidoreductase FAD-binding domain protein~KEGG: dia:Dtpsy_3433 ferric reductase domain protein transmembrane component gene gene4392 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4329 Alide_4330 Alide_4330 Alide_4330 4537753 4538307 + cytochrome b561 KEGG: pag:PLES_43981 cytochrome b561 gene gene4393 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4330 Alide_4331 Alide_4331 Alide_4331 4538356 4538724 + hypothetical protein KEGG: dia:Dtpsy_3434 hypothetical protein gene gene4394 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4331 Alide_4332 Alide_4332 Alide_4332 4538747 4539226 + hypothetical protein KEGG: ajs:Ajs_4087 hypothetical protein gene gene4395 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4332 Alide_4333 Alide_4333 Alide_4333 4539223 4541433 + oxidoreductase FAD/NAD(P)-binding domain protein PFAM: oxidoreductase FAD/NAD(P)-binding domain protein%3B flavodoxin/nitric oxide synthase%3B Oxidoreductase FAD-binding domain protein~KEGG: ajs:Ajs_4088 oxidoreductase FAD/NAD(P)-binding subunit gene gene4396 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4333 Alide_4334 Alide_4334 Alide_4334 4541414 4542391 + ApbE family lipoprotein PFAM: ApbE family lipoprotein~KEGG: dia:Dtpsy_3437 ApbE family lipoprotein gene gene4397 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4334 Alide_4335 Alide_4335 Alide_4335 4542493 4542798 + hypothetical protein KEGG: ajs:Ajs_4090 hypothetical protein gene gene4398 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4335 Alide_4336 Alide_4336 Alide_4336 4542814 4543281 - hypothetical protein KEGG: ajs:Ajs_4091 hypothetical protein gene gene4399 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4336 Alide_4337 Alide_4337 Alide_4337 4543353 4545902 + ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC KEGG: dia:Dtpsy_3444 ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~TIGRFAM: ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B cation transporting ATPase domain protein%3B Haloacid dehalogenase domain protein hydrolase gene gene4400 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4337 Alide_4338 Alide_4338 Alide_4338 4546196 4546898 + pseudogene gene4401 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4338 Alide_4339 Alide_4339 Alide_4339 4547073 4547505 + pseudogene gene4402 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4339 Alide_4340 Alide_4340 Alide_4340 4547583 4548677 - 2-nitropropane dioxygenase NPD PFAM: 2-nitropropane dioxygenase NPD~KEGG: bpt:Bpet0267 hypothetical protein gene gene4403 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4340 Alide_4341 Alide_4341 Alide_4341 4548679 4549650 - hypothetical protein KEGG: bpt:Bpetpseudo_01 hypothetical protein gene gene4404 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4341 Alide_4342 Alide_4342 Alide_4342 4549680 4550834 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: bpt:Bpet0266 acyl-CoA dehydrogenase gene gene4405 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4342 Alide_4343 Alide_4343 Alide_4343 4550853 4551662 - regulatory protein IclR KEGG: bpt:Bpet0265 IclR family transcriptional regulator~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene4406 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4343 Alide_4344 Alide_4344 Alide_4344 4551852 4553192 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: bpt:Bpet0264 acyl_CoA transferase/carnitine dehydratase gene gene4407 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4344 Alide_4345 Alide_4345 Alide_4345 4553210 4554211 + quinone oxidoreductase%2C YhdH/YhfP family KEGG: bpt:Bpet0263 alcohol dehydrogenase III~TIGRFAM: quinone oxidoreductase%2C YhdH/YhfP family~PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein gene gene4408 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4345 Alide_4346 Alide_4346 Alide_4346 4554252 4554423 + pseudogene gene4409 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4346 Alide_4347 Alide_4347 Alide_4347 4554441 4555673 - acyl-CoA dehydrogenase domain-containing protein PFAM: acyl-CoA dehydrogenase domain-containing protein~KEGG: sth:STH2463 acyl-CoA dehydrogenase%2C short-chain specific gene gene4410 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4347 Alide_4348 Alide_4348 Alide_4348 4555687 4556673 - hypothetical protein KEGG: bpt:Bpetpseudo_01 hypothetical protein gene gene4411 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4348 Alide_4349 Alide_4349 Alide_4349 4556711 4557571 - regulatory protein IclR KEGG: bpt:Bpet0265 IclR family transcriptional regulator~PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR gene gene4412 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4349 Alide_4350 Alide_4350 Alide_4350 4557656 4558891 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: bpt:Bpet0264 acyl_CoA transferase/carnitine dehydratase gene gene4413 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4350 Alide_4351 Alide_4351 Alide_4351 4558888 4559829 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: vei:Veis_4196 LysR family transcriptional regulator gene gene4414 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4351 Alide_4352 Alide_4352 Alide_4352 4559936 4560922 + hypothetical protein KEGG: vap:Vapar_1641 hypothetical protein gene gene4415 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4352 Alide_4353 Alide_4353 Alide_4353 4560934 4562553 + gamma-glutamyltransferase TIGRFAM: gamma-glutamyltransferase~KEGG: vap:Vapar_1640 gamma-glutamyltransferase~PFAM: gamma-glutamyltranspeptidase gene gene4416 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4353 Alide_4354 Alide_4354 Alide_4354 4562569 4563231 - hypothetical protein KEGG: scl:sce0660 putative ABC transporter sodium permease gene gene4417 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4354 Alide_4355 Alide_4355 Alide_4355 4563384 4565051 - fumarate reductase/succinate dehydrogenase flavoprotein domain protein PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein~KEGG: ajs:Ajs_4093 twin-arginine translocation pathway signal gene gene4418 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4355 Alide_4356 Alide_4356 Alide_4356 4565051 4566604 - Spermine synthase PFAM: Spermine synthase~KEGG: dia:Dtpsy_3446 spermidine synthase gene gene4419 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4356 Alide_4357 Alide_4357 Alide_4357 4566618 4566839 - protein of unknown function DUF350 PFAM: protein of unknown function DUF350~KEGG: dia:Dtpsy_3447 protein of unknown function DUF350 gene gene4420 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4357 Alide_4358 Alide_4358 Alide_4358 4566876 4568360 - putative transmembrane protein KEGG: dia:Dtpsy_3448 putative transmembrane protein gene gene4421 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4358 Alide_4359 Alide_4359 Alide_4359 4568429 4569466 - band 7 protein PFAM: band 7 protein~KEGG: ajs:Ajs_4099 putative transmembrane protein gene gene4422 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4359 Alide_4360 Alide_4360 Alide_4360 4569635 4569943 + Protein of unknown function DUF2061%2C membrane PFAM: Protein of unknown function DUF2061%2C membrane~KEGG: dia:Dtpsy_3450 hypothetical protein gene gene4423 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4360 Alide_4361 Alide_4361 Alide_4361 4569865 4570188 - flagellar basal body rod protein KEGG: dia:Dtpsy_3453 flagellar basal body rod protein gene gene4424 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4361 Alide_4362 Alide_4362 Alide_4362 4570250 4571194 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dia:Dtpsy_3454 transcriptional regulator%2C LysR family gene gene4425 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4362 Alide_4363 Alide_4363 Alide_4363 4571286 4572641 + Beta-alanine--pyruvate transaminase KEGG: aav:Aave_4744 beta alanine--pyruvate transaminase~PFAM: aminotransferase class-III gene gene4426 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4363 Alide_4364 Alide_4364 Alide_4364 4572711 4574228 + methylmalonate-semialdehyde dehydrogenase KEGG: dia:Dtpsy_3456 methylmalonate-semialdehyde dehydrogenase~TIGRFAM: methylmalonate-semialdehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase gene gene4427 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4364 Alide_4365 Alide_4365 Alide_4365 4574320 4575453 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein%3B MASE2 domain protein~KEGG: aav:Aave_4748 diguanylate cyclase~SMART: GGDEF domain containing protein gene gene4428 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4365 Alide_4366 Alide_4366 Alide_4366 4575466 4576305 - GntR domain protein KEGG: dia:Dtpsy_3457 GntR domain protein~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH gene gene4429 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4366 Alide_4367 Alide_4367 Alide_4367 4576527 4577732 + extracellular ligand-binding receptor KEGG: dia:Dtpsy_3458 extracellular ligand-binding receptor gene gene4430 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4367 Alide_4368 Alide_4368 Alide_4368 4577767 4578627 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dia:Dtpsy_3459 inner-membrane translocator gene gene4431 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4368 Alide_4369 Alide_4369 Alide_4369 4578633 4579628 + inner-membrane translocator PFAM: inner-membrane translocator~KEGG: dac:Daci_6025 inner-membrane translocator gene gene4432 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4369 Alide_4370 Alide_4370 Alide_4370 4579625 4580407 + ABC transporter related protein KEGG: dia:Dtpsy_3461 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene4433 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4370 Alide_4371 Alide_4371 Alide_4371 4580404 4581180 + ABC transporter related protein KEGG: dac:Daci_6027 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene4434 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4371 Alide_4372 Alide_4372 Alide_4372 4581194 4582450 + amidase%2C hydantoinase/carbamoylase family TIGRFAM: amidase%2C hydantoinase/carbamoylase family~KEGG: dia:Dtpsy_3463 amidase%2C hydantoinase/carbamoylase family~PFAM: peptidase M20%3B peptidase dimerisation domain protein gene gene4435 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4372 Alide_4373 Alide_4373 Alide_4373 4582447 4583913 + Microcystin LR degradation protein MlrC-like protein PFAM: Microcystin LR degradation protein MlrC-like%3B MlrC domain protein~KEGG: dia:Dtpsy_3464 microcystin LR degradation protein MlrC-like protein gene gene4436 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4373 Alide_4374 Alide_4374 Alide_4374 4584061 4586370 + malic protein NAD-binding protein PFAM: malic protein NAD-binding%3B malic protein domain protein%3B phosphate acetyl/butaryl transferase~KEGG: dia:Dtpsy_3465 malic enzyme gene gene4437 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4374 Alide_4375 Alide_4375 Alide_4375 4586504 4586908 + guanine-specific ribonuclease N1 and T1 PFAM: guanine-specific ribonuclease N1 and T1~KEGG: dia:Dtpsy_3466 guanine-specific ribonuclease N1 and T1 gene gene4438 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4375 Alide_4376 Alide_4376 Alide_4376 4587049 4587474 + Barstar (barnase inhibitor) PFAM: Barstar (barnase inhibitor)~KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor) gene gene4439 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4376 Alide_4377 Alide_4377 Alide_4377 4587704 4588471 - dimethyladenosine transferase TIGRFAM: dimethyladenosine transferase~PFAM: ribosomal RNA adenine methylase transferase~KEGG: dia:Dtpsy_3468 dimethyladenosine transferase~SMART: Ribosomal RNA adenine methylase transferase-like gene gene4440 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4377 Alide_4378 Alide_4378 Alide_4378 4588468 4589883 - SurA domain protein PFAM: SurA domain%3B PpiC-type peptidyl-prolyl cis-trans isomerase~KEGG: dia:Dtpsy_3469 SurA domain protein gene gene4441 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4378 Alide_4379 Alide_4379 Alide_4379 4589917 4592361 - Organic solvent tolerance protein PFAM: Organic solvent tolerance protein~KEGG: dia:Dtpsy_3470 organic solvent tolerance protein gene gene4442 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4379 Alide_4380 Alide_4380 Alide_4380 4592435 4593550 + aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: ajs:Ajs_4113 aminoglycoside phosphotransferase gene gene4443 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4380 Alide_4381 Alide_4381 Alide_4381 4593618 4594331 + protein of unknown function DUF558 PFAM: protein of unknown function DUF558~KEGG: dia:Dtpsy_3472 16S ribosomal RNA methyltransferase RsmE gene gene4444 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4381 Alide_4382 Alide_4382 Alide_4382 4594331 4595665 + hypothetical protein KEGG: dia:Dtpsy_3473 hypothetical protein gene gene4445 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4382 Alide_4383 Alide_4383 Alide_4383 4595658 4596362 + hypothetical protein KEGG: ajs:Ajs_4116 hypothetical protein gene gene4446 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4383 Alide_4384 Alide_4384 Alide_4384 4596363 4599200 + SMC domain protein PFAM: SMC domain protein~KEGG: dia:Dtpsy_3475 SMC domain protein gene gene4447 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4384 Alide_4385 Alide_4385 Alide_4385 4599273 4600736 - peptidase M20 PFAM: peptidase M20%3B peptidase dimerisation domain protein~KEGG: dia:Dtpsy_3479 peptidase M20 gene gene4448 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4385 Alide_4386 Alide_4386 Alide_4386 4600810 4601997 - diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~KEGG: dia:Dtpsy_3480 diguanylate cyclase~SMART: GGDEF domain containing protein gene gene4449 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4386 Alide_4387 Alide_4387 Alide_4387 4602173 4603015 - hypothetical protein KEGG: scl:sce1833 hypothetical protein gene gene4450 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4387 Alide_4388 Alide_4388 Alide_4388 4603152 4604168 + Domain of unknown function P63C PFAM: Domain of unknown function P63C~KEGG: bbr:BB2198 hypothetical protein gene gene4451 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4388 Alide_4389 Alide_4389 Alide_4389 4604170 4604316 - translation initiation factor IF-2 KEGG: cts:Ctha_0467 translation initiation factor IF-2 gene gene4452 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4389 Alide_4390 Alide_4390 Alide_4390 4604461 4605045 - methionine biosynthesis protein MetW KEGG: dia:Dtpsy_3482 methionine biosynthesis protein MetW~TIGRFAM: methionine biosynthesis protein MetW~PFAM: Methionine biosynthesis MetW protein gene gene4453 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4390 Alide_4391 Alide_4391 Alide_4391 4605042 4606172 - homoserine O-acetyltransferase TIGRFAM: homoserine O-acetyltransferase~KEGG: ajs:Ajs_4125 homoserine O-acetyltransferase~PFAM: alpha/beta hydrolase fold gene gene4454 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4391 Alide_4392 Alide_4392 Alide_4392 4606305 4606883 - protein of unknown function UPF0016 PFAM: protein of unknown function UPF0016~KEGG: dia:Dtpsy_3484 protein of unknown function UPF0016 gene gene4455 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4392 Alide_4393 Alide_4393 Alide_4393 4607355 4607705 + RNP-1 like RNA-binding protein KEGG: dia:Dtpsy_3485 RNP-1 like RNA-binding protein~PFAM: RNP-1 like RNA-binding protein~SMART: RNP-1 like RNA-binding protein gene gene4456 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4393 Alide_4394 Alide_4394 Alide_4394 4607941 4608375 + RNP-1 like RNA-binding protein KEGG: ajs:Ajs_4128 RNP-1 like RNA-binding protein~PFAM: RNP-1 like RNA-binding protein~SMART: RNP-1 like RNA-binding protein gene gene4457 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4394 Alide_4395 Alide_4395 Alide_4395 4608462 4609256 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: ajs:Ajs_4129 short chain dehydrogenase gene gene4458 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4395 Alide_4396 Alide_4396 Alide_4396 4609267 4609908 - protein of unknown function DUF1239 PFAM: protein of unknown function DUF1239~KEGG: dia:Dtpsy_3488 protein of unknown function DUF1239 gene gene4459 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4396 Alide_4397 Alide_4397 Alide_4397 4609905 4610477 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase%2C YrbI family KEGG: dia:Dtpsy_3489 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase%2C YrbI family~TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase%2C YrbI family gene gene4460 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4397 Alide_4398 Alide_4398 Alide_4398 4610477 4611478 - KpsF/GutQ family protein SMART: CBS domain containing protein~TIGRFAM: KpsF/GutQ family protein~KEGG: ajs:Ajs_4132 KpsF/GutQ family protein~PFAM: sugar isomerase (SIS)%3B CBS domain containing protein gene gene4461 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4398 Alide_4399 Alide_4399 Alide_4399 4611527 4613512 + sodium/hydrogen exchanger PFAM: sodium/hydrogen exchanger%3B TrkA-N domain protein%3B TrkA-C domain protein~KEGG: ajs:Ajs_4133 potassium efflux system protein gene gene4462 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4399 Alide_4400 Alide_4400 Alide_4400 4613550 4614104 + adenine phosphoribosyltransferase KEGG: dia:Dtpsy_3492 adenine phosphoribosyltransferase~TIGRFAM: adenine phosphoribosyltransferase~PFAM: phosphoribosyltransferase gene gene4463 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4400 Alide_4401 Alide_4401 Alide_4401 4614151 4615038 - hypothetical protein KEGG: ajs:Ajs_4136 hypothetical protein gene gene4464 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4401 Alide_4402 Alide_4402 Alide_4402 4615161 4615646 - cyclic nucleotide-binding protein KEGG: dia:Dtpsy_3494 cyclic nucleotide-binding protein~PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding gene gene4465 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4402 Alide_4403 Alide_4403 Alide_4403 4615729 4617126 - tRNA modification GTPase TrmE KEGG: ajs:Ajs_4138 tRNA modification GTPase TrmE~TIGRFAM: tRNA modification GTPase TrmE%3B small GTP-binding protein~PFAM: GTP-binding protein TrmE-like%3B GTP-binding protein HSR1-related gene gene4466 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4403 Alide_4404 Alide_4404 Alide_4404 4617204 4618091 - extracellular solute-binding protein family 3 KEGG: aav:Aave_1937 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3 gene gene4467 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4404 Alide_4405 Alide_4405 Alide_4405 4618361 4619557 + FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: vap:Vapar_1545 D-amino-acid dehydrogenase gene gene4468 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4405 Alide_4406 Alide_4406 Alide_4406 4619561 4620466 - LysR substrate-binding protein PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: aav:Aave_1935 LysR family transcriptional regulator gene gene4469 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4406 Alide_4407 Alide_4407 Alide_4407 4620494 4621234 - aspartate racemase KEGG: aav:Aave_1663 aspartate racemase~TIGRFAM: aspartate racemase~PFAM: Asp/Glu/hydantoin racemase gene gene4470 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4407 Alide_4408 Alide_4408 Alide_4408 4621231 4622049 - peptidase M55 D-aminopeptidase PFAM: peptidase M55 D-aminopeptidase~KEGG: aav:Aave_1662 D-aminopeptidase DppA gene gene4471 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4408 Alide_4409 Alide_4409 Alide_4409 4622114 4623151 - peptidase S58 DmpA PFAM: peptidase S58 DmpA~KEGG: aav:Aave_1661 aminopeptidase DmpA gene gene4472 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4409 Alide_4410 Alide_4410 Alide_4410 4623148 4624056 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: aav:Aave_1660 binding-protein-dependent transport systems inner membrane component gene gene4473 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4410 Alide_4411 Alide_4411 Alide_4411 4624064 4624984 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: aav:Aave_1659 binding-protein-dependent transport systems inner membrane component gene gene4474 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4411 Alide_4412 Alide_4412 Alide_4412 4625053 4626597 - extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: aav:Aave_1658 extracellular solute-binding protein gene gene4475 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4412 Alide_4413 Alide_4413 Alide_4413 4626689 4628563 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~KEGG: aav:Aave_1657 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~SMART: AAA ATPase gene gene4476 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4413 Alide_4414 Alide_4414 Alide_4414 4628580 4629578 - peptidase T2 asparaginase 2 PFAM: peptidase T2 asparaginase 2~KEGG: aav:Aave_1656 asparaginase gene gene4477 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4414 Alide_4415 Alide_4415 Alide_4415 4629575 4630507 - sugar isomerase (SIS) PFAM: sugar isomerase (SIS)%3B helix-turn-helix protein RpiR~KEGG: aav:Aave_1655 RpiR family transcriptional regulator gene gene4478 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4415 Alide_4416 Alide_4416 Alide_4416 4630718 4631376 - pseudogene gene4479 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4416 Alide_4417 Alide_4417 Alide_4417 4631372 4632214 - pseudogene gene4480 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4417 Alide_4418 Alide_4418 Alide_4418 4632627 4634213 - extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: ajs:Ajs_4139 extracellular solute-binding protein gene gene4481 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4418 Alide_4419 Alide_4419 Alide_4419 4634321 4636015 - membrane protein insertase%2C YidC/Oxa1 family domain containing KEGG: dia:Dtpsy_3542 YidC translocase/secretase~TIGRFAM: membrane protein insertase%2C YidC/Oxa1 family domain containing%3B membrane protein insertase%2C YidC/Oxa1 family~PFAM: 60 kDa inner membrane insertion protein gene gene4482 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4419 Alide_4420 Alide_4420 Alide_4420 4636012 4636305 - protein of unknown function DUF37 PFAM: protein of unknown function DUF37~KEGG: ajs:Ajs_4141 hypothetical protein gene gene4483 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4420 Alide_4421 Alide_4421 Alide_4421 4636302 4636742 - hypothetical protein KEGG: dia:Dtpsy_3544 hypothetical protein gene gene4484 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4421 Alide_4422 Alide_4422 Alide_4422 4636785 4636919 - ribosomal protein L34 KEGG: vei:Veis_5015 50S ribosomal protein L34~TIGRFAM: ribosomal protein L34~PFAM: ribosomal protein L34 gene gene4485 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4422 Alide_4423 Alide_4423 Alide_4423 126 611 + hypothetical protein manually curated~KEGG: see:SNSL254_p_0036 hypothetical protein gene gene4617 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4423 Alide_4424 Alide_4424 Alide_4424 505 4851 - domain of unknown function DUF1738 KEGG: reu:Reut_D6521 toprim~PFAM: domain of unknown function DUF1738%3B TOPRIM domain-containing protein~SMART: Toprim sub domain-containing protein gene gene4618 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4424 Alide_4425 Alide_4425 Alide_4425 4855 5244 - conjugal transfer protein KEGG: bam:Bamb_6615 conjugal transfer protein gene gene4619 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4425 Alide_4426 Alide_4426 Alide_4426 5266 7329 - DNA topoisomerase III SMART: DNA topoisomerase I DNA-binding%3B Toprim sub domain-containing protein%3B DNA topoisomerase I ATP-binding~TIGRFAM: DNA topoisomerase III~KEGG: bam:Bamb_6614 DNA topoisomerase III~PFAM: DNA topoisomerase type IA central domain protein%3B TOPRIM domain-containing protein%3B DNA topoisomerase type IA zn finger domain protein gene gene4620 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4426 Alide_4427 Alide_4427 Alide_4427 7341 7877 - conjugative transfer signal peptidase TraF KEGG: bam:Bamb_6613 conjugal transfer peptidase TraF~TIGRFAM: conjugative transfer signal peptidase TraF~PFAM: Peptidase S26%2C conserved region gene gene4621 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4427 Alide_4428 Alide_4428 Alide_4428 7874 9787 - TRAG family protein PFAM: TRAG family protein~KEGG: reu:Reut_D6525 conjugal transfer coupling protein TraG gene gene4622 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4428 Alide_4429 Alide_4429 Alide_4429 9784 12024 - Relaxase/mobilization nuclease family protein PFAM: Relaxase/mobilization nuclease family protein~KEGG: reu:Reut_D6526 conjugal transfer relaxase TraI gene gene4623 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4429 Alide_4430 Alide_4430 Alide_4430 12059 12433 - conjugal transfer relaxosome component TraJ KEGG: bam:Bamb_6610 conjugal transfer relaxosome component TraJ gene gene4624 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4430 Alide_4431 Alide_4431 Alide_4431 12807 13205 + TraK protein of DNA transfer system KEGG: bam:Bamb_6609 TraK protein of DNA transfer system gene gene4625 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4431 Alide_4432 Alide_4432 Alide_4432 13205 13930 + conjugal transfer protein TraL KEGG: reu:Reut_D6529 conjugal transfer protein TraL gene gene4626 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4432 Alide_4433 Alide_4433 Alide_4433 13930 14370 + conjugal transfer protein TraM KEGG: bam:Bamb_6607 conjugal transfer protein TraM gene gene4627 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4433 Alide_4434 Alide_4434 Alide_4434 14573 15226 - hypothetical protein KEGG: bam:Bamb_6606 hypothetical protein gene gene4628 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4434 Alide_4435 Alide_4435 Alide_4435 15255 15602 - putative conjugation protein TraO KEGG: bam:Bamb_6605 putative conjugation protein TraO gene gene4629 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4435 Alide_4436 Alide_4436 Alide_4436 15773 16804 - hypothetical protein KEGG: reu:Reut_D6443 hypothetical protein gene gene4630 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4436 Alide_4437 Alide_4437 Alide_4437 16983 18032 - parB-like partition protein TIGRFAM: parB-like partition protein~PFAM: KorB domain protein%3B ParB domain protein nuclease~KEGG: bam:Bamb_6603 ParB-like partition proteins~SMART: ParB domain protein nuclease gene gene4631 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4437 Alide_4438 Alide_4438 Alide_4438 18029 18793 - cobyrinic acid a%2Cc-diamide synthase KEGG: bam:Bamb_6602 cobyrinic acid a%2Cc-diamide synthase gene gene4632 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4438 Alide_4439 Alide_4439 Alide_4439 18790 19092 - TrfB transcriptional repressor protein KEGG: eba:p2D2 TrfB transcriptional repressor protein gene gene4633 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4439 Alide_4440 Alide_4440 Alide_4440 19206 19736 - hypothetical protein KEGG: bam:Bamb_6601 hypothetical protein gene gene4634 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4440 Alide_4441 Alide_4441 Alide_4441 19738 20067 - hypothetical protein KEGG: bam:Bamb_6600 hypothetical protein gene gene4635 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4441 Alide_4442 Alide_4442 Alide_4442 20212 20427 - putative glyoxylate reductase/hydroxypyruvate reductase-like protein KEGG: api:100160724 similar to putative glyoxylate reductase/hydroxypyruvate reductase gene gene4636 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4442 Alide_4443 Alide_4443 Alide_4443 20486 20722 - hypothetical protein KEGG: bam:Bamb_6599 hypothetical protein gene gene4637 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4443 Alide_4444 Alide_4444 Alide_4444 20882 21139 - hypothetical protein KEGG: bam:Bamb_6598 hypothetical protein gene gene4638 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4444 Alide_4445 Alide_4445 Alide_4445 21156 22361 - hypothetical protein KEGG: bam:Bamb_6597 hypothetical protein gene gene4639 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4445 Alide_4446 Alide_4446 Alide_4446 22413 22841 - Antirestriction protein PFAM: Antirestriction protein~KEGG: bam:Bamb_6596 antirestriction protein gene gene4640 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4446 Alide_4447 Alide_4447 Alide_4447 24060 24386 + transposase IS3/IS911 family protein KEGG: rme:Rmet_6068 transposase DNA binding site ISRme15~manually curated~PFAM: transposase IS3/IS911 family protein gene gene4641 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4447 Alide_4448 Alide_4448 Alide_4448 24383 24778 + pseudogene gene4642 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4448 Alide_4449 Alide_4449 Alide_4449 24921 26207 - pseudogene gene4643 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4449 Alide_4450 Alide_4450 Alide_4450 26517 26945 - thioesterase superfamily protein KEGG: app:CAP2UW1_2427 thioesterase superfamily protein~manually curated~PFAM: thioesterase superfamily protein gene gene4644 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4450 Alide_4451 Alide_4451 Alide_4451 27927 29417 + Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: tmz:Tmz1t_4040 hypothetical protein gene gene4645 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4451 Alide_4452 Alide_4452 Alide_4452 29404 30162 + IstB domain protein ATP-binding protein KEGG: tmz:Tmz1t_3158 IstB domain protein ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase gene gene4646 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4452 Alide_4453 Alide_4453 Alide_4453 30159 30371 + hypothetical protein KEGG: tmz:Tmz1t_4038 ankyrin gene gene4647 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4453 Alide_4454 Alide_4454 Alide_4454 30577 30861 - addiction module toxin%2C RelE/StbE family KEGG: tin:Tint_3241 addiction module toxin%2C RelE/StbE family~TIGRFAM: addiction module toxin%2C RelE/StbE family~PFAM: plasmid stabilization system gene gene4648 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4454 Alide_4455 Alide_4455 Alide_4455 30858 31136 - antitoxin of a toxin/antitoxin system KEGG: rme:Rmet_6342 antitoxin of a toxin/antitoxin system gene gene4649 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4455 Alide_4456 Alide_4456 Alide_4456 31390 31968 + Resolvase domain protein PFAM: Resolvase domain~KEGG: rpf:Rpic12D_4479 resolvase domain protein gene gene4650 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4456 Alide_4457 Alide_4457 Alide_4457 31965 34994 + transposase Tn3 family protein PFAM: transposase Tn3 family protein~KEGG: rpf:Rpic12D_4478 transposase Tn3 family protein gene gene4651 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4457 Alide_4458 Alide_4458 Alide_4458 35025 36755 - pseudogene gene4652 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4458 Alide_4459 Alide_4459 Alide_4459 36898 37245 + pseudogene gene4653 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4459 Alide_4460 Alide_4460 Alide_4460 37288 37626 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: sml:Smlt2414 putative ISXac3 like transposase for insertion sequence element gene gene4654 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4460 Alide_4461 Alide_4461 Alide_4461 37844 39013 - AAA-4 family protein KEGG: ckr:CKR_2452 hypothetical protein~manually curated~PFAM: AAA-4 family protein gene gene4655 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4461 Alide_4462 Alide_4462 Alide_4462 39142 39846 - Glutathione S-transferase domain protein PFAM: Glutathione S-transferase domain~KEGG: bpt:Bpet1280 putative glutathione transferase gene gene4656 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4462 Alide_4463 Alide_4463 Alide_4463 39843 40457 - regulatory protein TetR PFAM: regulatory protein TetR~KEGG: bpt:Bpet1592 TetR family transcriptional regulator gene gene4657 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4463 Alide_4464 Alide_4464 Alide_4464 40521 41315 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: xau:Xaut_2977 short-chain dehydrogenase/reductase SDR gene gene4658 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4464 Alide_4465 Alide_4465 Alide_4465 41317 42033 - Glutathione S-transferase domain protein PFAM: Glutathione S-transferase domain~KEGG: xau:Xaut_2975 glutathione S-transferase domain-containing protein gene gene4659 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4465 Alide_4466 Alide_4466 Alide_4466 42030 43019 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: bpy:Bphyt_5155 protein of unknown function DUF6 transmembrane gene gene4660 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4466 Alide_4467 Alide_4467 Alide_4467 43016 43678 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~KEGG: rcu:RCOM_2149470 bacterioferritin comigratory protein%2C putative gene gene4661 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4467 Alide_4468 Alide_4468 Alide_4468 44017 44298 - addiction module toxin%2C RelE/StbE family KEGG: sjp:SJA_P1-00290 RelE/StbE-family addiction module toxin~TIGRFAM: addiction module toxin%2C RelE/StbE family~PFAM: plasmid stabilization system gene gene4662 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4468 Alide_4469 Alide_4469 Alide_4469 44285 44551 - addiction module antitoxin%2C RelB/DinJ family KEGG: afr:AFE_1589 DNA-damage-inducible protein J~TIGRFAM: addiction module antitoxin%2C RelB/DinJ family~PFAM: RelB antitoxin gene gene4663 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4469 Alide_4470 Alide_4470 Alide_4470 45090 46310 - TrfA family protein PFAM: TrfA family protein~KEGG: bam:Bamb_6593 TrfA family protein gene gene4664 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4470 Alide_4471 Alide_4471 Alide_4471 46357 46698 - single-strand binding protein KEGG: bam:Bamb_6592 single-strand binding protein~TIGRFAM: single-strand binding protein~PFAM: single-strand binding protein/Primosomal replication protein n gene gene4665 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4471 Alide_4472 Alide_4472 Alide_4472 46812 47174 + helix-turn-helix domain protein KEGG: reu:Reut_D6501 conjugal transfer protein TrbA~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene4666 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4472 Alide_4473 Alide_4473 Alide_4473 47484 48446 + P-type conjugative transfer ATPase TrbB TIGRFAM: P-type conjugative transfer ATPase TrbB~PFAM: type II secretion system protein E~KEGG: bam:Bamb_6635 conjugal transfer ATPase TrbB~SMART: AAA ATPase gene gene4667 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4473 Alide_4474 Alide_4474 Alide_4474 48463 48927 + Conjugal transfer protein TrbC PFAM: Conjugal transfer protein TrbC~KEGG: bam:Bamb_6634 conjugal transfer protein TrbC gene gene4668 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4474 Alide_4475 Alide_4475 Alide_4475 48931 49242 + conjugal transfer protein TrbD KEGG: ajs:Ajs_4272 conjugal transfer protein TrbD gene gene4669 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4475 Alide_4476 Alide_4476 Alide_4476 49239 51797 + type IV secretion/conjugal transfer ATPase%2C VirB4 family TIGRFAM: type IV secretion/conjugal transfer ATPase%2C VirB4 family~PFAM: CagE%2C TrbE%2C VirB component of type IV transporter system%2C conserved region~KEGG: bam:Bamb_6632 conjugal transfer protein TrbE~SMART: AAA ATPase gene gene4670 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4476 Alide_4477 Alide_4477 Alide_4477 51794 52576 + conjugal transfer protein TrbF KEGG: bam:Bamb_6631 conjugal transfer protein TrbF gene gene4671 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4477 Alide_4478 Alide_4478 Alide_4478 52594 53493 + P-type conjugative transfer protein TrbG KEGG: bam:Bamb_6630 conjugal transfer protein TrbG~TIGRFAM: P-type conjugative transfer protein TrbG~PFAM: Conjugal transfer protein TrbG/VirB9/CagX gene gene4672 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4478 Alide_4479 Alide_4479 Alide_4479 53496 53984 + conjugal transfer protein TrbH KEGG: bam:Bamb_6629 conjugal transfer protein TrbH gene gene4673 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4479 Alide_4480 Alide_4480 Alide_4480 53989 55410 + conjugation TrbI family protein PFAM: conjugation TrbI family protein~KEGG: bam:Bamb_6628 conjugal transfer protein TrbI gene gene4674 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4480 Alide_4481 Alide_4481 Alide_4481 55431 56195 + P-type conjugative transfer protein TrbJ KEGG: bam:Bamb_6627 conjugal transfer protein TrbJ~TIGRFAM: P-type conjugative transfer protein TrbJ~PFAM: type IV secretion system family protein gene gene4675 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4481 Alide_4482 Alide_4482 Alide_4482 56205 56432 + entry exclusion protein TrbK KEGG: bam:Bamb_6626 entry exclusion protein TrbK gene gene4676 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4482 Alide_4483 Alide_4483 Alide_4483 56443 58161 + P-type conjugative transfer protein TrbL KEGG: bam:Bamb_6625 TrbL/VirB6 plasmid conjugal transfer protein~TIGRFAM: P-type conjugative transfer protein TrbL~PFAM: TrbL/VirB6 plasmid conjugal transfer protein gene gene4677 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4483 Alide_4484 Alide_4484 Alide_4484 58179 58766 + conjugal transfer protein TrbM KEGG: bam:Bamb_6624 conjugal transfer protein TrbM gene gene4678 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4484 Alide_4485 Alide_4485 Alide_4485 58780 59415 + Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic~KEGG: bam:Bamb_6623 conjugal transfer protein TrbN gene gene4679 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4485 Alide_4486 Alide_4486 Alide_4486 59444 59710 + hypothetical protein KEGG: bam:Bamb_6622 hypothetical protein gene gene4680 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4486 Alide_4487 Alide_4487 Alide_4487 59710 60408 + conjugal transfer protein TrbP KEGG: bam:Bamb_6621 conjugal transfer protein TrbP gene gene4681 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4487 Alide_4488 Alide_4488 Alide_4488 60424 60855 + hypothetical protein KEGG: ajs:Ajs_4259 hypothetical protein gene gene4682 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4488 Alide_4489 Alide_4489 Alide_4489 61008 61583 - Resolvase domain protein PFAM: Resolvase domain~KEGG: tmz:Tmz1t_2147 resolvase domain protein gene gene4683 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4489 Alide_4490 Alide_4490 Alide_4490 61710 61946 - addiction module toxin%2C RelE/StbE family manually curated~TIGRFAM: addiction module toxin%2C RelE/StbE family~KEGG: tmz:Tmz1t_2146 addiction module toxin%2C RelE/StbE family~PFAM: plasmid stabilization system gene gene4684 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4490 Alide_4491 Alide_4491 Alide_4491 61983 64949 - transposase Tn3 family protein PFAM: transposase Tn3 family protein~KEGG: tmz:Tmz1t_2145 transposase Tn3 family protein gene gene4685 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4491 Alide_4492 Alide_4492 Alide_4492 64981 65115 + pseudogene gene4686 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4492 Alide_4493 Alide_4493 Alide_4493 65117 66835 + Integrase catalytic region protein PFAM: Integrase catalytic region%3B Transposase-like Mu~KEGG: rme:Rmet_4045 transposase gene gene4687 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4493 Alide_4494 Alide_4494 Alide_4494 66838 67746 + TniB family protein PFAM: TniB family protein~KEGG: tin:Tint_3210 TniB family protein gene gene4688 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4494 Alide_4495 Alide_4495 Alide_4495 67797 68960 + transposition protein TniQ KEGG: bxe:Bxe_C1175 transposition protein TniQ gene gene4689 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4495 Alide_4496 Alide_4496 Alide_4496 69021 69635 + Resolvase domain protein PFAM: Resolvase domain~KEGG: enc:ECL_A229 TniR protein gene gene4690 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4496 Alide_4497 Alide_4497 Alide_4497 69688 69924 - MerE family protein PFAM: MerE family protein~KEGG: enc:ECL_A230 putative mercury resistance protein MerE gene gene4691 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4497 Alide_4498 Alide_4498 Alide_4498 69921 70286 - mercuric resistance transcriptional repressor protein MerD TIGRFAM: mercuric resistence transcriptional repressor protein MerD~PFAM: regulatory protein MerR~KEGG: enc:ECL_A231 mercury repressor protein%2C MerD~SMART: regulatory protein MerR gene gene4692 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4498 Alide_4499 Alide_4499 Alide_4499 70303 71949 - mercuric reductase KEGG: enc:ECL_A232 mercuric reductase~TIGRFAM: mercuric reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B Heavy metal transport/detoxification protein%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region gene gene4693 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4499 Alide_4500 Alide_4500 Alide_4500 71946 72191 - mercury ion transport transmembrane protein MerF KEGG: enc:ECL_A233 mercury ion transport transmembrane protein MerF gene gene4694 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4500 Alide_4501 Alide_4501 Alide_4501 72194 72469 - mercuric transport protein periplasmic component KEGG: enc:ECL_A234 mercury ion transport protein periplasmic component MerP~TIGRFAM: mercuric transport protein periplasmic component~PFAM: Heavy metal transport/detoxification protein gene gene4695 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4501 Alide_4502 Alide_4502 Alide_4502 72485 72835 - Mercuric transport protein MerT PFAM: Mercuric transport protein MerT~KEGG: enc:ECL_A235 mercury ion transport integral membrane protein MerT gene gene4696 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4502 Alide_4503 Alide_4503 Alide_4503 72907 73341 + Hg(II)-responsive transcriptional regulator TIGRFAM: Hg(II)-responsive transcriptional regulator~PFAM: Transcription regulator MerR DNA binding%3B regulatory protein MerR~KEGG: enc:ECL_A236 putative transcriptional regulator MerR~SMART: regulatory protein MerR gene gene4697 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4503 Alide_4504 Alide_4504 Alide_4504 73466 74008 - hypothetical protein manually curated~KEGG: aba:Acid345_3707 hypothetical protein gene gene4698 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4504 Alide_4505 Alide_4505 Alide_4505 74042 74575 - alkylhydroperoxidase like protein%2C AhpD family KEGG: xcv:XCV2347 hypothetical protein~TIGRFAM: alkylhydroperoxidase like protein%2C AhpD family~PFAM: Carboxymuconolactone decarboxylase gene gene4699 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4505 Alide_4506 Alide_4506 Alide_4506 74693 75535 + helix-turn-helix- domain containing protein AraC type KEGG: xcv:XCV2346 AraC family transcriptional regulator~PFAM: helix-turn-helix- domain containing protein AraC type~SMART: Helix-turn-helix%2C AraC domain gene gene4700 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4506 Alide_4507 Alide_4507 Alide_4507 75713 76003 + DNA polymerase beta domain protein region protein PFAM: DNA polymerase beta domain protein region~KEGG: tmz:Tmz1t_2148 DNA polymerase beta domain protein region gene gene4701 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4507 Alide_4508 Alide_4508 Alide_4508 76000 76386 + protein of unknown function DUF86 PFAM: protein of unknown function DUF86~KEGG: tmz:Tmz1t_2149 protein of unknown function DUF86 gene gene4702 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4508 Alide_4509 Alide_4509 Alide_4509 76402 76575 + hypothetical protein KEGG: bvi:Bcep1808_7240 hypothetical protein gene gene4703 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4509 Alide_4510 Alide_4510 Alide_4510 76605 76979 + Cupin 2 conserved barrel domain protein KEGG: tmz:Tmz1t_2150 cupin 2 conserved barrel domain protein~manually curated~PFAM: Cupin 2 conserved barrel domain protein gene gene4704 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4510 Alide_4511 Alide_4511 Alide_4511 77234 77560 + hypothetical protein KEGG: tmz:Tmz1t_2151 hypothetical protein gene gene4705 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4511 Alide_4512 Alide_4512 Alide_4512 77557 78057 + hypothetical protein KEGG: tmz:Tmz1t_2152 hypothetical protein gene gene4706 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4512 Alide_4513 Alide_4513 Alide_4513 78054 78425 + hypothetical protein KEGG: tmz:Tmz1t_2153 hypothetical protein gene gene4707 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4513 Alide_4514 Alide_4514 Alide_4514 78419 78976 + Resolvase domain protein PFAM: Resolvase domain%3B Resolvase helix-turn-helix domain protein~KEGG: tmz:Tmz1t_2154 resolvase domain protein gene gene4708 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4514 Alide_4515 Alide_4515 Alide_4515 187 1257 - hypothetical protein KEGG: pol:Bpro_5514 hypothetical protein gene gene4486 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4515 Alide_4516 Alide_4516 Alide_4516 1265 1969 - cobyrinic acid a%2Cc-diamide synthase KEGG: pol:Bpro_5515 cobyrinic acid a%2Cc-diamide synthase gene gene4487 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4516 Alide_4517 Alide_4517 Alide_4517 3068 3346 + hypothetical protein KEGG: vei:Veis_3760 hypothetical protein gene gene4488 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4517 Alide_4518 Alide_4518 Alide_4518 3348 3851 + hypothetical protein manually curated~KEGG: gga:423125 similar to scavenger receptor cysteine-rich type 1 protein CD163c-alpha gene gene4489 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4518 Alide_4519 Alide_4519 Alide_4519 3870 4051 + pseudogene gene4490 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4519 Alide_4520 Alide_4520 Alide_4520 4303 4593 + histone family protein nucleoid-structuring protein H-NS KEGG: dia:Dtpsy_1065 histone family protein nucleoid-structuring protein H-NS~PFAM: histone family protein nucleoid-structuring protein H-NS~SMART: histone family protein nucleoid-structuring protein H-NS gene gene4491 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4520 Alide_4521 Alide_4521 Alide_4521 4606 4926 + histone family protein nucleoid-structuring protein H-NS KEGG: vap:Vapar_1795 histone family protein nucleoid-structuring protein H-NS~PFAM: histone family protein nucleoid-structuring protein H-NS~SMART: histone family protein nucleoid-structuring protein H-NS gene gene4492 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4521 Alide_4522 Alide_4522 Alide_4522 5025 5441 + hypothetical protein KEGG: cph:Cpha266_0558 Mg chelatase%2C subunit ChlI gene gene4493 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4522 Alide_4523 Alide_4523 Alide_4523 5438 7261 + type IV conjugative transfer system protein TraD KEGG: see:SNSL254_p_0066 type IV conjugative transfer system protein TraD gene gene4494 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4523 Alide_4524 Alide_4524 Alide_4524 7271 7879 + hypothetical protein KEGG: pmr:PMI2473 plasmid-related protein gene gene4495 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4524 Alide_4525 Alide_4525 Alide_4525 7843 8619 + EAL domain protein KEGG: afo:Afer_1731 diguanylate phosphodiesterase~PFAM: EAL domain protein~SMART: EAL domain protein gene gene4496 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4525 Alide_4526 Alide_4526 Alide_4526 8616 9077 - hypothetical protein KEGG: cqu:CpipJ_CPIJ000220 conserved oligomeric Golgi complex component 6 gene gene4497 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4526 Alide_4527 Alide_4527 Alide_4527 9315 9821 + Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic~KEGG: mpt:Mpe_B0379 invasion protein gene gene4498 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4527 Alide_4528 Alide_4528 Alide_4528 11454 13577 + hypothetical protein KEGG: see:SNSL254_p_0093 hypothetical protein gene gene4499 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4528 Alide_4529 Alide_4529 Alide_4529 13962 14285 + hypothetical protein KEGG: transcription initiation factor E subunit alpha gene gene4500 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4529 Alide_4530 Alide_4530 Alide_4530 14282 14560 + type IV conjugative transfer system protein TraL TIGRFAM: type IV conjugative transfer system protein TraL~KEGG: bvi:Bcep1808_6760 pilus assembly protein gene gene4501 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4530 Alide_4531 Alide_4531 Alide_4531 14557 15333 + hypothetical protein KEGG: mpt:Mpe_B0365 sex pilus assembly protein gene gene4502 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4531 Alide_4532 Alide_4532 Alide_4532 15342 16475 + hypothetical protein KEGG: mpt:Mpe_B0366 sex pilus assembly protein gene gene4503 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4532 Alide_4533 Alide_4533 Alide_4533 16472 17902 + TraB pilus assembly family protein KEGG: bvi:Bcep1808_6757 TraB pilus assembly family protein gene gene4504 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4533 Alide_4534 Alide_4534 Alide_4534 17902 18417 + type IV conjugative transfer system protein TraV KEGG: mpt:Mpe_B0369 sex pilus assembly protein~TIGRFAM: type IV conjugative transfer system protein TraV~PFAM: Type IV conjugative transfer system protein TraV gene gene4505 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4534 Alide_4535 Alide_4535 Alide_4535 18453 18788 + hypothetical protein KEGG: bvi:Bcep1808_6755 hypothetical protein gene gene4506 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4535 Alide_4536 Alide_4536 Alide_4536 18799 21243 + type-IV secretion system protein TraC TIGRFAM: type-IV secretion system protein TraC~KEGG: mpt:Mpe_B0371 F-pilin subunit assembly into extended F pili gene gene4507 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4536 Alide_4537 Alide_4537 Alide_4537 21251 21745 + hypothetical protein KEGG: cli:Clim_1282 outer membrane efflux protein gene gene4508 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4537 Alide_4538 Alide_4538 Alide_4538 21856 22407 + Peptidase S26%2C conserved region protein KEGG: bvi:Bcep1808_6752 putative pilus assembly protein%2CTrhF (pilin signal peptidase)~manually curated~PFAM: Peptidase S26%2C conserved region gene gene4509 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4538 Alide_4539 Alide_4539 Alide_4539 22565 23554 + Type-F conjugative transfer system pilin assembly protein TrbC PFAM: Type-F conjugative transfer system pilin assembly protein TrbC~KEGG: afr:AFE_1095 pilus assembly protein TraW%2C putative gene gene4510 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4539 Alide_4540 Alide_4540 Alide_4540 23554 24708 + TraU family protein PFAM: TraU family protein~KEGG: afr:AFE_1096 conjugal transfer protein TraU%2C putative gene gene4511 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4540 Alide_4541 Alide_4541 Alide_4541 24723 28715 + hypothetical protein KEGG: pmr:PMI2456 mating pair stabilization protein gene gene4512 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4541 Alide_4542 Alide_4542 Alide_4542 29224 30111 + hypothetical protein KEGG: pan:PODANSg9310 hypothetical protein gene gene4513 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4542 Alide_4543 Alide_4543 Alide_4543 30099 31079 + sex pilus assembly protein KEGG: bvi:Bcep1808_6751 sex pilus assembly protein gene gene4514 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4543 Alide_4544 Alide_4544 Alide_4544 31082 32590 + TraH family protein PFAM: TraH family protein~KEGG: bvi:Bcep1808_6750 TraH family protein gene gene4515 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4544 Alide_4545 Alide_4545 Alide_4545 32599 38373 + hypothetical protein KEGG: cbr:CBG02561 Hypothetical protein CBG02561 gene gene4516 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4545 Alide_4546 Alide_4546 Alide_4546 38484 39299 + Sel1 domain protein repeat-containing protein KEGG: dvl:Dvul_0954 Sel1 domain-containing protein~PFAM: Sel1 domain protein repeat-containing protein~SMART: Sel1 domain protein repeat-containing protein gene gene4517 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4546 Alide_4547 Alide_4547 Alide_4547 39372 40256 + hypothetical protein KEGG: gfo:GFO_2422 hypothetical protein gene gene4518 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4547 Alide_4548 Alide_4548 Alide_4548 40306 41127 - IstB domain protein ATP-binding protein KEGG: mpt:Mpe_A2996 putative transposase~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase gene gene4519 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4548 Alide_4549 Alide_4549 Alide_4549 41124 42635 - Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: bvi:Bcep1808_6160 integrase catalytic subunit gene gene4520 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4549 Alide_4550 Alide_4550 Alide_4550 42692 43462 + pseudogene gene4521 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4550 Alide_4551 Alide_4551 Alide_4551 43639 45165 + Integrase catalytic region protein PFAM: Integrase catalytic region%3B regulatory protein MerR~KEGG: ctt:CtCNB1_2459 IstA gene gene4522 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4551 Alide_4552 Alide_4552 Alide_4552 45155 45958 + IstB domain protein ATP-binding protein KEGG: ctt:CtCNB1_3734 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase gene gene4523 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4552 Alide_4553 Alide_4553 Alide_4553 46273 47208 + hypothetical protein KEGG: pag:PLES_25131 hypothetical protein gene gene4524 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4553 Alide_4554 Alide_4554 Alide_4554 47275 47523 + hypothetical protein KEGG: rme:Rmet_6231 hypothetical protein gene gene4525 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4554 Alide_4555 Alide_4555 Alide_4555 47525 47635 + hypothetical protein gene gene4526 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4555 Alide_4556 Alide_4556 Alide_4556 47767 48147 + hypothetical protein KEGG: rfr:Rfer_4359 hypothetical protein gene gene4527 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4556 Alide_4557 Alide_4557 Alide_4557 48419 49102 + hypothetical protein KEGG: scb:SCAB_16871 putative oxidoreductase gene gene4528 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4557 Alide_4558 Alide_4558 Alide_4558 49184 50155 + hypothetical protein KEGG: rfr:Rfer_4370 hypothetical protein gene gene4529 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4558 Alide_4559 Alide_4559 Alide_4559 50331 51050 + hypothetical protein KEGG: cbr:CBG23756 C. briggsae CBR-SIR-2.1 protein gene gene4530 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4559 Alide_4560 Alide_4560 Alide_4560 51131 51385 + hypothetical protein KEGG: mpt:Mpe_B0157 hypothetical protein gene gene4531 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4560 Alide_4561 Alide_4561 Alide_4561 51382 51564 + hypothetical protein gene gene4532 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4561 Alide_4562 Alide_4562 Alide_4562 51781 52095 + hypothetical protein KEGG: tkm:TK90_2628 hypothetical protein gene gene4533 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4562 Alide_4563 Alide_4563 Alide_4563 52105 52425 + hypothetical protein KEGG: aba:Acid345_4350 2-oxoglutarate dehydrogenase E2 component gene gene4534 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4563 Alide_4564 Alide_4564 Alide_4564 52504 52965 + hypothetical protein KEGG: ele:Elen_0894 hypothetical protein gene gene4535 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4564 Alide_4565 Alide_4565 Alide_4565 53214 53597 + hypothetical protein KEGG: svi:Svir_02820 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II gene gene4536 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4565 Alide_4566 Alide_4566 Alide_4566 53594 53842 + hypothetical protein KEGG: pna:Pnap_4210 hypothetical protein gene gene4537 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4566 Alide_4567 Alide_4567 Alide_4567 53915 54676 + hypothetical protein KEGG: rfr:Rfer_4370 hypothetical protein gene gene4538 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4567 Alide_4568 Alide_4568 Alide_4568 54843 55154 + hypothetical protein manually curated~KEGG: tin:Tint_1860 hypothetical protein gene gene4539 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4568 Alide_4569 Alide_4569 Alide_4569 55151 55882 + hypothetical protein KEGG: tin:Tint_1861 hypothetical protein gene gene4540 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4569 Alide_4570 Alide_4570 Alide_4570 55886 56215 + hypothetical protein manually curated~KEGG: rpf:Rpic12D_2831 hypothetical protein gene gene4541 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4570 Alide_4571 Alide_4571 Alide_4571 56208 56780 + hypothetical protein manually curated~KEGG: reh:H16_B0351 hypothetical protein gene gene4542 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4571 Alide_4572 Alide_4572 Alide_4572 56800 57459 + integrase family protein PFAM: integrase family protein~KEGG: bmj:BMULJ_05815 tyrosine recombinase gene gene4543 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4572 Alide_4573 Alide_4573 Alide_4573 57459 57671 + hypothetical protein KEGG: mth:MTH700 hypothetical protein gene gene4544 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4573 Alide_4574 Alide_4574 Alide_4574 57762 57953 + hypothetical protein KEGG: mgr:MGG_03826 hypothetical protein gene gene4545 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4574 Alide_4575 Alide_4575 Alide_4575 58591 58983 + hypothetical protein KEGG: bid:Bind_3528 AraC family transcriptional regulator gene gene4546 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4575 Alide_4576 Alide_4576 Alide_4576 58998 59384 + hypothetical protein KEGG: rpf:Rpic12D_4799 hypothetical protein gene gene4547 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4576 Alide_4577 Alide_4577 Alide_4577 59673 59894 + hypothetical protein KEGG: tmt:Tmath_0092 PKD domain containing protein gene gene4548 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4577 Alide_4578 Alide_4578 Alide_4578 59911 60132 + hypothetical protein KEGG: rpf:Rpic12D_4785 hypothetical protein gene gene4549 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4578 Alide_4579 Alide_4579 Alide_4579 60423 61022 + hypothetical protein KEGG: pna:Pnap_4409 hypothetical protein gene gene4550 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4579 Alide_4580 Alide_4580 Alide_4580 61034 61258 + hypothetical protein KEGG: rpf:Rpic12D_4779 hypothetical protein gene gene4551 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4580 Alide_4581 Alide_4581 Alide_4581 61314 61682 + hypothetical protein KEGG: rha:RHA1_ro03242 transcriptional regulator gene gene4552 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4581 Alide_4582 Alide_4582 Alide_4582 61700 61897 + hypothetical protein gene gene4553 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4582 Alide_4583 Alide_4583 Alide_4583 62188 62394 + hypothetical protein KEGG: bxe:Bxe_A3093 hypothetical protein gene gene4554 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4583 Alide_4584 Alide_4584 Alide_4584 62409 62705 + hypothetical protein KEGG: rer:RER_07640 ceramidase gene gene4555 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4584 Alide_4585 Alide_4585 Alide_4585 63071 63235 + hypothetical protein KEGG: mvu:Metvu_1533 RNA polymerase RPB1 domain 5 gene gene4556 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4585 Alide_4586 Alide_4586 Alide_4586 63248 63625 + hypothetical protein KEGG: cel:F49A5.6 THaumatiN family gene gene4557 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4586 Alide_4587 Alide_4587 Alide_4587 63637 63891 + hypothetical protein KEGG: pjd:Pjdr2_4457 Ham1 family protein gene gene4558 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4587 Alide_4588 Alide_4588 Alide_4588 64281 64520 + hypothetical protein KEGG: hch:HCH_04829 hypothetical protein gene gene4559 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4588 Alide_4589 Alide_4589 Alide_4589 64600 64806 + hypothetical protein KEGG: bxe:Bxe_A3093 hypothetical protein gene gene4560 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4589 Alide_4590 Alide_4590 Alide_4590 64822 65058 + hypothetical protein KEGG: bge:BC1002_4953 hypothetical protein gene gene4561 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4590 Alide_4591 Alide_4591 Alide_4591 65154 65318 + hypothetical protein KEGG: mvu:Metvu_1533 RNA polymerase RPB1 domain 5 gene gene4562 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4591 Alide_4592 Alide_4592 Alide_4592 66153 67667 - transposase IS66 KEGG: dia:Dtpsy_2523 transposase IS66 gene gene4563 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4592 Alide_4593 Alide_4593 Alide_4593 67750 68082 - IS66 Orf2 family protein PFAM: IS66 Orf2 family protein~KEGG: rfr:Rfer_2710 IS66 Orf2 like gene gene4564 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4593 Alide_4594 Alide_4594 Alide_4594 68079 68507 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rfr:Rfer_2709 transposase IS3/IS911 gene gene4565 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4594 Alide_4595 Alide_4595 Alide_4595 68567 69163 + phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase like enzyme KEGG: ajs:Ajs_4213 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases like enzyme gene gene4566 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4595 Alide_4596 Alide_4596 Alide_4596 69216 69581 + hypothetical protein KEGG: lbz:LbrM34_V2.1910 hypothetical protein gene gene4567 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4596 Alide_4597 Alide_4597 Alide_4597 69620 70567 + peptidase S49 PFAM: peptidase S49~KEGG: eba:p1B184 periplasmic serine protease (ClpP class) gene gene4568 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4597 Alide_4598 Alide_4598 Alide_4598 70582 70860 + hypothetical protein KEGG: aeh:Mlg_1551 hypothetical protein gene gene4569 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4598 Alide_4599 Alide_4599 Alide_4599 70956 71171 - hypothetical protein KEGG: glo:Glov_1032 xanthine/uracil/vitamin C permease gene gene4570 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4599 Alide_4600 Alide_4600 Alide_4600 71289 71621 - hypothetical protein KEGG: clu:CLUG_01384 hypothetical protein gene gene4571 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4600 Alide_4601 Alide_4601 Alide_4601 71767 72948 - transposase Tn3 family protein PFAM: transposase Tn3 family protein~KEGG: aau:AAur_pTC10224 IS1071%2C transposase gene gene4572 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4601 Alide_4602 Alide_4602 Alide_4602 72984 76013 - transposase Tn3 family protein PFAM: transposase Tn3 family protein~KEGG: rpf:Rpic12D_4478 transposase Tn3 family protein gene gene4573 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4602 Alide_4603 Alide_4603 Alide_4603 76010 76587 - pseudogene gene4574 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4603 Alide_4604 Alide_4604 Alide_4604 76841 77119 + antitoxin of a toxin/antitoxin system KEGG: rme:Rmet_6342 antitoxin of a toxin/antitoxin system gene gene4575 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4604 Alide_4605 Alide_4605 Alide_4605 77116 77400 + addiction module toxin%2C RelE/StbE family KEGG: tin:Tint_3241 addiction module toxin%2C RelE/StbE family~TIGRFAM: addiction module toxin%2C RelE/StbE family~PFAM: plasmid stabilization system gene gene4576 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4605 Alide_4606 Alide_4606 Alide_4606 77807 78367 + hypothetical protein manually curated~KEGG: rme:Rmet_6340 hypothetical protein gene gene4577 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4606 Alide_4607 Alide_4607 Alide_4607 78375 78857 + Cupin 2 conserved barrel domain protein KEGG: rme:Rmet_6339 cupin 2 conserved barrel domain-containing protein~manually curated~PFAM: Cupin 2 conserved barrel domain protein gene gene4578 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4607 Alide_4608 Alide_4608 Alide_4608 79354 80313 + hypothetical protein KEGG: bgl:bglu_2p1110 hypothetical protein gene gene4579 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4608 Alide_4609 Alide_4609 Alide_4609 80638 81177 - molybdopterin-guanine dinucleotide biosynthesis protein B KEGG: rfr:Rfer_3089 molybdopterin-guanine dinucleotide biosynthesis protein B~manually curated~TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B gene gene4580 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4609 Alide_4610 Alide_4610 Alide_4610 81247 81564 - cytochrome c class I PFAM: cytochrome c class I~KEGG: rme:Rmet_3424 cytochrome c%2C class I gene gene4581 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4610 Alide_4611 Alide_4611 Alide_4611 81691 82410 - DMSO reductase family type II enzyme%2C heme b subunit TIGRFAM: DMSO reductase family type II enzyme%2C heme b subunit~KEGG: hla:Hlac_1337 DMSO reductase family type II enzyme%2C heme B subunit~PFAM: Cytochrome c-552/DMSO reductase-like%2C haem-binding domain gene gene4582 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4611 Alide_4612 Alide_4612 Alide_4612 82407 82988 - DMSO reductase family type II enzyme chaperone KEGG: dol:Dole_0197 delta-subunit of ethylbenzene dehydrogenase~TIGRFAM: DMSO reductase family type II enzyme chaperone~PFAM: TorD-like chaperone gene gene4583 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4612 Alide_4613 Alide_4613 Alide_4613 82985 83971 - DMSO reductase family type II enzyme%2C iron-sulfur subunit TIGRFAM: DMSO reductase family type II enzyme%2C iron-sulfur subunit~KEGG: pmx:PERMA_0658 respiratory nitrate reductase 1 beta chain (nitrate reductase A subunit beta) (quinol-nitrate oxidoreductase subunitbeta) gene gene4584 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4613 Alide_4614 Alide_4614 Alide_4614 83982 86726 - DMSO reductase family type II enzyme%2C molybdopterin subunit KEGG: pmx:PERMA_0657 dimethylsulfide dehydrogenase subunit alpha (dimethylsulfide dehydrogenase molybdenum subunit) (DMS DH alphasubunit) (DMS DH molybdenum subunit)~TIGRFAM: DMSO reductase family type II enzyme%2C molybdopterin subunit~PFAM: molydopterin dinucleotide-binding region%3B molybdopterin oxidoreductase gene gene4585 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4614 Alide_4615 Alide_4615 Alide_4615 87047 87904 + Chlorite dismutase KEGG: dar:Daro_2580 chlorite dismutase~manually curated~PFAM: Chlorite dismutase gene gene4586 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4615 Alide_4616 Alide_4616 Alide_4616 88041 88328 + pentapeptide MXKDX repeat protein TIGRFAM: pentapeptide MXKDX repeat protein~KEGG: pol:Bpro_2731 hypothetical protein gene gene4587 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4616 Alide_4617 Alide_4617 Alide_4617 88334 88576 + pseudogene gene4588 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4617 Alide_4618 Alide_4618 Alide_4618 88673 89044 + Cupin 2 conserved barrel domain protein KEGG: kpn:KPN_pKPN5p08243 hypothetical protein~manually curated~PFAM: Cupin 2 conserved barrel domain protein gene gene4589 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4618 Alide_4619 Alide_4619 Alide_4619 89415 90386 + integrase family protein PFAM: integrase family protein~KEGG: eba:p2A217 putative integrase gene gene4590 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4619 Alide_4620 Alide_4620 Alide_4620 90406 91161 - IstB domain protein ATP-binding protein KEGG: bge:BC1002_7025 IstB domain protein ATP-binding protein~PFAM: IstB domain protein ATP-binding protein%3B IstB ATP binding domain protein~SMART: AAA ATPase gene gene4591 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4620 Alide_4621 Alide_4621 Alide_4621 91181 92719 - Integrase catalytic region protein PFAM: Integrase catalytic region%3B Sigma-70 region 4 type 2~KEGG: bxe:Bxe_A3740 putative transposase gene gene4592 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4621 Alide_4622 Alide_4622 Alide_4622 93023 93919 - transposase Tn3 family protein PFAM: transposase Tn3 family protein~KEGG: aau:AAur_pTC10224 IS1071%2C transposase gene gene4593 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4622 Alide_4623 Alide_4623 Alide_4623 94890 96803 - integrase family protein PFAM: integrase family protein~KEGG: rpf:Rpic12D_5076 integrase family protein gene gene4594 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4623 Alide_4624 Alide_4624 Alide_4624 97121 97504 - hypothetical protein KEGG: pna:Pnap_4414 hypothetical protein gene gene4595 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4624 Alide_4625 Alide_4625 Alide_4625 97530 100289 - type III restriction protein res subunit KEGG: maq:Maqu_4078 type III restriction enzyme%2C res subunit~PFAM: type III restriction protein res subunit~SMART: DEAD-like helicase gene gene4596 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4625 Alide_4626 Alide_4626 Alide_4626 100286 102214 - DNA methylase N-4/N-6 domain protein PFAM: DNA methylase N-4/N-6 domain protein~KEGG: maq:Maqu_4077 DNA methylase N-4/N-6 domain-containing protein gene gene4597 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4626 Alide_4627 Alide_4627 Alide_4627 102214 102537 - PemK family protein PFAM: PemK family protein~KEGG: xcv:XCVc0002 putative PemK-like protein gene gene4598 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4627 Alide_4628 Alide_4628 Alide_4628 102534 102755 - hypothetical protein KEGG: xcv:XCVc0003 hypothetical protein gene gene4599 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4628 Alide_4629 Alide_4629 Alide_4629 102831 103667 + restriction endonuclease PFAM: restriction endonuclease%3B DNA topoisomerase type IA zn finger domain protein~KEGG: eba:ebA67 hypothetical protein gene gene4600 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4629 Alide_4630 Alide_4630 Alide_4630 103685 104056 - histone family protein DNA-binding protein KEGG: ajs:Ajs_1589 histone family protein DNA-binding protein~PFAM: histone family protein DNA-binding protein~SMART: histone family protein DNA-binding protein gene gene4601 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4630 Alide_4631 Alide_4631 Alide_4631 104214 104666 + transcriptional regulator%2C XRE family KEGG: vap:Vapar_5860 transcriptional regulator%2C XRE family gene gene4602 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4631 Alide_4632 Alide_4632 Alide_4632 104677 105234 - hypothetical protein KEGG: reu:Reut_A2370 hypothetical protein gene gene4603 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4632 Alide_4633 Alide_4633 Alide_4633 105502 107247 + transposase Tn3 family protein PFAM: transposase Tn3 family protein~KEGG: aau:AAur_pTC10224 IS1071%2C transposase gene gene4604 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4633 Alide_4634 Alide_4634 Alide_4634 107675 108031 - Cupin 2 conserved barrel domain protein KEGG: rme:Rmet_6339 cupin 2 conserved barrel domain-containing protein~manually curated~PFAM: Cupin 2 conserved barrel domain protein gene gene4605 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4634 Alide_4635 Alide_4635 Alide_4635 108154 108726 - hypothetical protein KEGG: rme:Rmet_6340 hypothetical protein gene gene4606 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4635 Alide_4636 Alide_4636 Alide_4636 109133 109417 - addiction module toxin%2C RelE/StbE family KEGG: tin:Tint_3241 addiction module toxin%2C RelE/StbE family~TIGRFAM: addiction module toxin%2C RelE/StbE family~PFAM: plasmid stabilization system gene gene4607 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4636 Alide_4637 Alide_4637 Alide_4637 109414 109692 - antitoxin of a toxin/antitoxin system KEGG: rme:Rmet_6342 antitoxin of a toxin/antitoxin system gene gene4608 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4637 Alide_4638 Alide_4638 Alide_4638 109946 110524 + Resolvase domain protein PFAM: Resolvase domain~KEGG: rpf:Rpic12D_4479 resolvase domain protein gene gene4609 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4638 Alide_4639 Alide_4639 Alide_4639 110521 113551 + pseudogene gene4610 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4639 Alide_4640 Alide_4640 Alide_4640 113579 114016 + pseudogene gene4611 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4640 Alide_4641 Alide_4641 Alide_4641 114221 114895 - transposase Tn3 family protein PFAM: transposase Tn3 family protein~KEGG: aau:AAur_pTC10224 IS1071%2C transposase gene gene4612 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4641 Alide_4642 Alide_4642 Alide_4642 115162 115413 - Wgr family protein manually curated~KEGG: alv:Alvin_3256 Wgr gene gene4613 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4642 Alide_4643 Alide_4643 Alide_4643 116308 116775 + hypothetical protein KEGG: xca:xccb100_0185 cysteine desulfurase gene gene4614 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4643 Alide_4644 Alide_4644 Alide_4644 117039 117539 + hypothetical protein KEGG: oan:Oant_2921 AraC family transcriptional regulator gene gene4615 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4644 Alide_4645 Alide_4645 Alide_4645 117756 118919 - initiator RepB protein PFAM: initiator RepB protein~KEGG: bmj:BMULJ_05362 replication protein gene gene4616 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_4645 Alide_R0001 Alide_R0001 Alide_R0001 472750 472825 + tRNA-Arg GenePRIMP tRNA gene454 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0001 Alide_R0002 Alide_R0002 Alide_R0002 472974 473059 + tRNA-Tyr tRNA-Tyr1 tRNA gene455 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0002 Alide_R0003 Alide_R0003 Alide_R0003 473108 473181 + tRNA-Gly GenePRIMP~GenePRIMP tRNA gene456 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0003 Alide_R0004 Alide_R0004 Alide_R0004 473222 473296 + tRNA-Thr tRNA-Thr1 tRNA gene457 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0004 Alide_R0005 Alide_R0005 Alide_R0005 474575 474650 + tRNA-Trp tRNA-Trp1 tRNA gene459 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0005 Alide_R0006 Alide_R0006 Alide_R0006 492551 492626 + tRNA-Phe tRNA-Phe1 tRNA gene473 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0006 Alide_R0007 Alide_R0007 Alide_R0007 963264 963339 + tRNA-Thr tRNA-Thr2 tRNA gene913 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0007 Alide_R0008 Alide_R0008 Alide_R0008 982775 982851 - tRNA-Pro tRNA-Pro3 tRNA gene931 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0008 Alide_R0009 Alide_R0009 Alide_R0009 1043387 1043463 - tRNA-Gln tRNA-Gln1 tRNA gene990 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0009 Alide_R0010 Alide_R0010 Alide_R0010 1107343 1107419 - tRNA-Arg tRNA-Arg4 tRNA gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0010 Alide_R0011 Alide_R0011 Alide_R0011 1113156 1113240 + tRNA-Leu tRNA-Leu1 tRNA gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0011 Alide_R0012 Alide_R0012 Alide_R0012 1316742 1316815 - tRNA-Lys tRNA-Lys3 tRNA gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0012 Alide_R0013 Alide_R0013 Alide_R0013 1353566 1353641 - tRNA-Lys tRNA-Lys2 tRNA gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0013 Alide_R0014 Alide_R0014 Alide_R0014 1393688 1393764 + tRNA-Val tRNA-Val1 tRNA gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0014 Alide_R0015 Alide_R0015 Alide_R0015 1516026 1516102 - tRNA-Arg tRNA-Arg3 tRNA gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0015 Alide_R0016 Alide_R0016 Alide_R0016 1555666 1555741 - tRNA-Thr tRNA-Thr3 tRNA gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0016 Alide_R0017 Alide_R0017 Alide_R0017 1592473 1592548 + tRNA-Ala tRNA-Ala1 tRNA gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0017 Alide_R0018 Alide_R0018 Alide_R0018 1592569 1592644 + tRNA-Glu tRNA-Glu1 tRNA gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0018 Alide_R0019 Alide_R0019 Alide_R0019 1592692 1592768 + tRNA-Asp tRNA-Asp1 tRNA gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0019 Alide_R0020 Alide_R0020 Alide_R0020 1592775 1592850 + tRNA-Ala tRNA-Ala2 tRNA gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0020 Alide_R0021 Alide_R0021 Alide_R0021 1592874 1592949 + tRNA-Glu tRNA-Glu2 tRNA gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0021 Alide_R0022 Alide_R0022 Alide_R0022 1592997 1593073 + tRNA-Asp tRNA-Asp2 tRNA gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0022 Alide_R0023 Alide_R0023 Alide_R0023 1646027 1646102 + tRNA-His tRNA-His1 tRNA gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0023 Alide_R0024 Alide_R0024 Alide_R0024 1711561 1711636 + tRNA-Lys tRNA-Lys1 tRNA gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0024 Alide_R0025 Alide_R0025 Alide_R0025 1898354 1898427 - tRNA-Gly tRNA-Gly4 tRNA gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0025 Alide_R0026 Alide_R0026 Alide_R0026 1902802 1902878 + tRNA-Pro tRNA-Pro1 tRNA gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0026 Alide_R0027 Alide_R0027 ssrA ssrA 1917558 1917934 + tmRNA as predicted by Rfam (RF00023)%2C score 196.22 tmRNA gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0027 Alide_R0028 Alide_R0028 Alide_R0028 1999034 1999118 - tRNA-Leu tRNA-Leu5 tRNA gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0028 Alide_R0029 Alide_R0029 Alide_R0029 1999295 1999379 - tRNA-Leu tRNA-Leu4 tRNA gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0029 Alide_R0030 Alide_R0030 Alide_R0030 2035587 2035662 + tRNA-Ala tRNA-Ala3 tRNA gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0030 Alide_R0031 Alide_R0031 Alide_R0031 2172481 2172573 + tRNA-Ser tRNA-Ser1 tRNA gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0031 Alide_R0032 Alide_R0032 Alide_R0032 2261156 2261230 + tRNA-Val tRNA-Val2 tRNA gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0032 Alide_R0033 Alide_R0033 Alide_R0033 2261265 2261339 + tRNA-Val tRNA-Val3 tRNA gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0033 Alide_R0034 Alide_R0034 ffs ffs 2533697 2533798 + SRP RNA%3B RNA component of signal recognition particle gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0034 Alide_R0035 Alide_R0035 Alide_R0035 2587160 2587236 - tRNA-Pro tRNA-Pro2 tRNA gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0035 Alide_R0036 Alide_R0036 Alide_R0036 2701633 2701708 + tRNA-Asn tRNA-Asn1 tRNA gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0036 Alide_R0037 Alide_R0037 Alide_R0037 2701761 2701836 + tRNA-Asn tRNA-Asn2 tRNA gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0037 Alide_R0038 Alide_R0038 Alide_R0038 2786410 2786500 + tRNA-Ser tRNA-Ser2 tRNA gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0038 Alide_R0039 Alide_R0039 Alide_R0039 2994259 2994334 - tRNA-Val tRNA-Val4 tRNA gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0039 Alide_R0040 Alide_R0040 Alide_R0040 2998308 2998399 - tRNA-Leu tRNA-Leu3 tRNA gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0040 Alide_R0041 Alide_R0041 Alide_R0041 2998539 2998614 - tRNA-Gly tRNA-Gly3 tRNA gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0041 Alide_R0042 Alide_R0042 Alide_R0042 3091261 3091334 - tRNA-Cys tRNA-Cys1 tRNA gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0042 Alide_R0043 Alide_R0043 Alide_R0043 3091392 3091467 - tRNA-Gly tRNA-Gly2 tRNA gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0043 Alide_R0044 Alide_R0044 Alide_R0044 3097583 3097668 - tRNA-Leu tRNA-Leu2 tRNA gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0044 Alide_R0045 Alide_R0045 Alide_R0045 3138676 3138788 - 5S ribosomal RNA 5S ribosomal RNA as predicted by Rfam (RF00001)%2C score 84.63 rRNA gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0045 Alide_R0046 Alide_R0046 Alide_R0046 3138905 3141781 - 23S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr 22%2C 2007 rRNA gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0046 Alide_R0047 Alide_R0047 Alide_R0047 3142143 3142218 - tRNA-Ala tRNA-Ala6 tRNA gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0047 Alide_R0048 Alide_R0048 Alide_R0048 3142249 3142325 - tRNA-Ile tRNA-Ile3 tRNA gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0048 Alide_R0049 Alide_R0049 Alide_R0049 3142430 3143946 - 16S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr 22%2C 2007 rRNA gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0049 Alide_R0050 Alide_R0050 Alide_R0050 3419115 3419204 + tRNA-Ser tRNA-Ser3 tRNA gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0050 Alide_R0051 Alide_R0051 Alide_R0051 3461338 3461517 + 6S RNA 6S / SsrS RNA as predicted by Rfam (RF00013)%2C score 44.01 ncRNA gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0051 Alide_R0052 Alide_R0052 Alide_R0052 3510066 3510155 - tRNA-Ser tRNA-Ser4 tRNA gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0052 Alide_R0053 Alide_R0053 Alide_R0053 3736144 3736218 - tRNA-Arg tRNA-Arg2 tRNA gene3644 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0053 Alide_R0054 Alide_R0054 Alide_R0054 3801243 3801319 + tRNA-Met tRNA-Met1 tRNA gene3704 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0054 Alide_R0055 Alide_R0055 rnpB rnpB 3892906 3893343 - RNA component of RNaseP Bacterial RNase P class A as predicted by Rfam (RF00010)%2C score 147.73 gene gene3788 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0055 Alide_R0056 Alide_R0056 Alide_R0056 3998551 3998663 - 5S ribosomal RNA 5S ribosomal RNA as predicted by Rfam (RF00001)%2C score 84.63 rRNA gene3887 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0056 Alide_R0057 Alide_R0057 Alide_R0057 3998780 4001656 - 23S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr 22%2C 2007 rRNA gene3888 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0057 Alide_R0058 Alide_R0058 Alide_R0058 4002018 4002093 - tRNA-Ala tRNA-Ala5 tRNA gene3889 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0058 Alide_R0059 Alide_R0059 Alide_R0059 4002124 4002200 - tRNA-Ile tRNA-Ile2 tRNA gene3890 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0059 Alide_R0060 Alide_R0060 Alide_R0060 4002305 4003821 - 16S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr 22%2C 2007 rRNA gene3891 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0060 Alide_R0061 Alide_R0061 Alide_R0061 4137240 4137316 - tRNA-Met tRNA-Met2 tRNA gene4014 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0061 Alide_R0062 Alide_R0062 Alide_R0062 4277642 4277754 - 5S ribosomal RNA 5S ribosomal RNA as predicted by Rfam (RF00001)%2C score 84.63 rRNA gene4156 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0062 Alide_R0063 Alide_R0063 Alide_R0063 4277871 4280747 - 23S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr 22%2C 2007 rRNA gene4157 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0063 Alide_R0064 Alide_R0064 Alide_R0064 4281109 4281184 - tRNA-Ala tRNA-Ala4 tRNA gene4158 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0064 Alide_R0065 Alide_R0065 Alide_R0065 4281215 4281291 - tRNA-Ile tRNA-Ile1 tRNA gene4159 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0065 Alide_R0066 Alide_R0066 Alide_R0066 4281396 4282912 - 16S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr 22%2C 2007 rRNA gene4160 http://www.ncbi.nlm.nih.gov/gene/?term=Alide_R0066