locus-tag class description HF896_00005 PF01526 Tn3 transposase DDE domain HF896_00005 PF13700 Domain of unknown function (DUF4158) HF896_00010 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_00010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HF896_00025 PF14759 Reductase C-terminal HF896_00025 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_00030 PF12804 MobA-like NTP transferase domain HF896_00035 PF02625 XdhC and CoxI family HF896_00035 PF13478 XdhC Rossmann domain HF896_00040 PF01040 UbiA prenyltransferase family HF896_00055 PF00501 AMP-binding enzyme HF896_00055 PF13193 AMP-binding enzyme C-terminal domain HF896_00065 PF00550 Phosphopantetheine attachment site HF896_00065 PF00109 Beta-ketoacyl synthase, N-terminal domain HF896_00065 PF14765 Polyketide synthase dehydratase HF896_00065 PF00107 Zinc-binding dehydrogenase HF896_00065 PF08240 Alcohol dehydrogenase GroES-like domain HF896_00065 PF00698 Acyl transferase domain HF896_00065 PF02801 Beta-ketoacyl synthase, C-terminal domain HF896_00065 PF16197 Ketoacyl-synthetase C-terminal extension HF896_00065 PF08659 KR domain HF896_00075 PF02625 XdhC and CoxI family HF896_00075 PF13478 XdhC Rossmann domain HF896_00080 PF01425 Amidase HF896_00090 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HF896_00090 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HF896_00095 PF00111 2Fe-2S iron-sulfur cluster binding domain HF896_00095 PF01799 [2Fe-2S] binding domain HF896_00100 PF00941 FAD binding domain in molybdopterin dehydrogenase HF896_00100 PF03450 CO dehydrogenase flavoprotein C-terminal domain HF896_00105 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_00105 PF00005 ABC transporter HF896_00115 PF02653 Branched-chain amino acid transport system / permease component HF896_00125 PF00005 ABC transporter HF896_00130 PF00111 2Fe-2S iron-sulfur cluster binding domain HF896_00130 PF01799 [2Fe-2S] binding domain HF896_00135 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HF896_00135 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HF896_00145 PF03466 LysR substrate binding domain HF896_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_00150 PF04205 FMN-binding domain HF896_00150 PF03358 NADPH-dependent FMN reductase HF896_00150 PF00890 FAD binding domain HF896_00165 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_00165 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HF896_00180 PF14759 Reductase C-terminal HF896_00180 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_00185 PF12804 MobA-like NTP transferase domain HF896_00190 PF13478 XdhC Rossmann domain HF896_00190 PF02625 XdhC and CoxI family HF896_00195 PF01040 UbiA prenyltransferase family HF896_00210 PF00501 AMP-binding enzyme HF896_00210 PF13193 AMP-binding enzyme C-terminal domain HF896_00220 PF00550 Phosphopantetheine attachment site HF896_00220 PF14765 Polyketide synthase dehydratase HF896_00220 PF08659 KR domain HF896_00220 PF00698 Acyl transferase domain HF896_00220 PF02801 Beta-ketoacyl synthase, C-terminal domain HF896_00220 PF00107 Zinc-binding dehydrogenase HF896_00220 PF16197 Ketoacyl-synthetase C-terminal extension HF896_00220 PF00109 Beta-ketoacyl synthase, N-terminal domain HF896_00220 PF08240 Alcohol dehydrogenase GroES-like domain HF896_00230 PF02625 XdhC and CoxI family HF896_00230 PF13478 XdhC Rossmann domain HF896_00235 PF01425 Amidase HF896_00245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HF896_00245 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HF896_00250 PF01799 [2Fe-2S] binding domain HF896_00250 PF00111 2Fe-2S iron-sulfur cluster binding domain HF896_00255 PF03450 CO dehydrogenase flavoprotein C-terminal domain HF896_00255 PF00941 FAD binding domain in molybdopterin dehydrogenase HF896_00260 PF00005 ABC transporter HF896_00260 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_00275 PF02653 Branched-chain amino acid transport system / permease component HF896_00285 PF00005 ABC transporter HF896_00290 PF11638 DnaA N-terminal domain HF896_00290 PF00308 Bacterial dnaA protein HF896_00290 PF08299 Bacterial dnaA protein helix-turn-helix HF896_00295 PF02767 DNA polymerase III beta subunit, central domain HF896_00295 PF00712 DNA polymerase III beta subunit, N-terminal domain HF896_00295 PF02768 DNA polymerase III beta subunit, C-terminal domain HF896_00300 PF00204 DNA gyrase B HF896_00300 PF18053 DNA gyrase B subunit insert domain HF896_00300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_00300 PF01751 Toprim domain HF896_00300 PF00986 DNA gyrase B subunit, carboxyl terminus HF896_00310 PF02515 CoA-transferase family III HF896_00315 PF00378 Enoyl-CoA hydratase/isomerase HF896_00320 PF03466 LysR substrate binding domain HF896_00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_00325 PF03401 Tripartite tricarboxylate transporter family receptor HF896_00335 PF00364 Biotin-requiring enzyme HF896_00335 PF02785 Biotin carboxylase C-terminal domain HF896_00335 PF18140 Propionyl-coenzyme A carboxylase BT domain HF896_00335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HF896_00335 PF00289 Biotin carboxylase, N-terminal domain HF896_00340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_00340 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_00340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_00345 PF01039 Carboxyl transferase domain HF896_00350 PF00708 Acylphosphatase HF896_00360 PF00742 Homoserine dehydrogenase HF896_00360 PF03447 Homoserine dehydrogenase, NAD binding domain HF896_00360 PF01842 ACT domain HF896_00365 PF06733 DEAD_2 HF896_00365 PF13307 Helicase C-terminal domain HF896_00375 PF00877 NlpC/P60 family HF896_00380 PF00793 DAHP synthetase I family HF896_00385 PF00990 Diguanylate cyclase, GGDEF domain HF896_00385 PF03707 Bacterial signalling protein N terminal repeat HF896_00385 PF00563 EAL domain HF896_00395 PF03401 Tripartite tricarboxylate transporter family receptor HF896_00400 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_00400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_00400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_00405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_00405 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_00405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_00410 PF03401 Tripartite tricarboxylate transporter family receptor HF896_00415 PF13607 Succinyl-CoA ligase like flavodoxin domain HF896_00415 PF13380 CoA binding domain HF896_00420 PF00378 Enoyl-CoA hydratase/isomerase HF896_00440 PF04381 Putative exonuclease, RdgC HF896_00445 PF07670 Nucleoside recognition HF896_00460 PF09278 MerR, DNA binding HF896_00460 PF00376 MerR family regulatory protein HF896_00470 PF00403 Heavy-metal-associated domain HF896_00475 PF00672 HAMP domain HF896_00475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF896_00475 PF02203 Tar ligand binding domain homologue HF896_00480 PF00873 AcrB/AcrD/AcrF family HF896_00485 PF00529 HlyD membrane-fusion protein of T1SS HF896_00485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF896_00495 PF00072 Response regulator receiver domain HF896_00495 PF00486 Transcriptional regulatory protein, C terminal HF896_00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_00500 PF00512 His Kinase A (phospho-acceptor) domain HF896_00505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HF896_00510 PF00043 Glutathione S-transferase, C-terminal domain HF896_00510 PF02798 Glutathione S-transferase, N-terminal domain HF896_00515 PF03692 Putative zinc- or iron-chelating domain HF896_00520 PF03358 NADPH-dependent FMN reductase HF896_00525 PF13932 GidA associated domain HF896_00525 PF01134 Glucose inhibited division protein A HF896_00535 PF02527 rRNA small subunit methyltransferase G HF896_00540 PF01810 LysE type translocator HF896_00545 PF13614 AAA domain HF896_00555 PF17762 HTH domain found in ParB protein HF896_00555 PF02195 ParB-like nuclease domain HF896_00580 PF00924 Mechanosensitive ion channel HF896_00580 PF05552 Conserved TM helix HF896_00585 PF01565 FAD binding domain HF896_00585 PF02913 FAD linked oxidases, C-terminal domain HF896_00595 PF01923 Cobalamin adenosyltransferase HF896_00600 PF03061 Thioesterase superfamily HF896_00605 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HF896_00605 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HF896_00615 PF03466 LysR substrate binding domain HF896_00615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_00620 PF03401 Tripartite tricarboxylate transporter family receptor HF896_00630 PF00106 short chain dehydrogenase HF896_00640 PF00860 Permease family HF896_00650 PF01494 FAD binding domain HF896_00655 PF00501 AMP-binding enzyme HF896_00655 PF13193 AMP-binding enzyme C-terminal domain HF896_00660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_00660 PF03466 LysR substrate binding domain HF896_00665 PF03401 Tripartite tricarboxylate transporter family receptor HF896_00670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_00670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_00670 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_00675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_00675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_00675 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_00680 PF00378 Enoyl-CoA hydratase/isomerase HF896_00685 PF01066 CDP-alcohol phosphatidyltransferase HF896_00690 PF07715 TonB-dependent Receptor Plug Domain HF896_00690 PF00593 TonB dependent receptor HF896_00705 PF03775 Septum formation inhibitor MinC, C-terminal domain HF896_00705 PF05209 Septum formation inhibitor MinC, N-terminal domain HF896_00710 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HF896_00715 PF03776 Septum formation topological specificity factor MinE HF896_00720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_00720 PF03466 LysR substrate binding domain HF896_00725 PF03401 Tripartite tricarboxylate transporter family receptor HF896_00730 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HF896_00730 PF13378 Enolase C-terminal domain-like HF896_00735 PF01613 Flavin reductase like domain HF896_00740 PF00561 alpha/beta hydrolase fold HF896_00760 PF03466 LysR substrate binding domain HF896_00760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_00770 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain HF896_00770 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain HF896_00780 PF00291 Pyridoxal-phosphate dependent enzyme HF896_00780 PF13291 ACT domain HF896_00785 PF18158 Adaptive response protein AidB N-terminal domain HF896_00785 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_00785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_00790 PF00690 Cation transporter/ATPase, N-terminus HF896_00790 PF00689 Cation transporting ATPase, C-terminus HF896_00795 PF00809 Pterin binding enzyme HF896_00795 PF02574 Homocysteine S-methyltransferase HF896_00795 PF02607 B12 binding domain HF896_00795 PF02965 Vitamin B12 dependent methionine synthase, activation domain HF896_00795 PF02310 B12 binding domain HF896_00800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_00800 PF03466 LysR substrate binding domain HF896_00805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_00805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_00805 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_00815 PF03401 Tripartite tricarboxylate transporter family receptor HF896_00820 PF09382 RQC domain HF896_00820 PF16124 RecQ zinc-binding HF896_00820 PF00570 HRDC domain HF896_00820 PF00271 Helicase conserved C-terminal domain HF896_00820 PF00270 DEAD/DEAH box helicase HF896_00840 PF03707 Bacterial signalling protein N terminal repeat HF896_00840 PF00990 Diguanylate cyclase, GGDEF domain HF896_00840 PF00563 EAL domain HF896_00850 PF00115 Cytochrome C and Quinol oxidase polypeptide I HF896_00855 PF02954 Bacterial regulatory protein, Fis family HF896_00855 PF00158 Sigma-54 interaction domain HF896_00865 PF03315 Serine dehydratase beta chain HF896_00865 PF03313 Serine dehydratase alpha chain HF896_00870 PF03401 Tripartite tricarboxylate transporter family receptor HF896_00875 PF00501 AMP-binding enzyme HF896_00875 PF13193 AMP-binding enzyme C-terminal domain HF896_00880 PF03401 Tripartite tricarboxylate transporter family receptor HF896_00890 PF03401 Tripartite tricarboxylate transporter family receptor HF896_00895 PF03401 Tripartite tricarboxylate transporter family receptor HF896_00900 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_00900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_00900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_00905 PF00501 AMP-binding enzyme HF896_00905 PF13193 AMP-binding enzyme C-terminal domain HF896_00915 PF00106 short chain dehydrogenase HF896_00920 PF03401 Tripartite tricarboxylate transporter family receptor HF896_00930 PF09339 IclR helix-turn-helix domain HF896_00950 PF00108 Thiolase, N-terminal domain HF896_00950 PF02803 Thiolase, C-terminal domain HF896_00955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_00955 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_00955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_00960 PF00501 AMP-binding enzyme HF896_00960 PF13193 AMP-binding enzyme C-terminal domain HF896_00965 PF01575 MaoC like domain HF896_00970 PF00106 short chain dehydrogenase HF896_00975 PF03401 Tripartite tricarboxylate transporter family receptor HF896_00990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_00990 PF03466 LysR substrate binding domain HF896_00995 PF02515 CoA-transferase family III HF896_01000 PF08240 Alcohol dehydrogenase GroES-like domain HF896_01000 PF00107 Zinc-binding dehydrogenase HF896_01005 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_01010 PF03466 LysR substrate binding domain HF896_01015 PF02913 FAD linked oxidases, C-terminal domain HF896_01015 PF01565 FAD binding domain HF896_01020 PF02515 CoA-transferase family III HF896_01025 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01040 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01050 PF02515 CoA-transferase family III HF896_01055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_01055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_01055 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_01065 PF00106 short chain dehydrogenase HF896_01070 PF01575 MaoC like domain HF896_01075 PF00378 Enoyl-CoA hydratase/isomerase HF896_01080 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HF896_01080 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HF896_01085 PF00108 Thiolase, N-terminal domain HF896_01085 PF02803 Thiolase, C-terminal domain HF896_01095 PF02515 CoA-transferase family III HF896_01100 PF00107 Zinc-binding dehydrogenase HF896_01100 PF08240 Alcohol dehydrogenase GroES-like domain HF896_01105 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_01110 PF03466 LysR substrate binding domain HF896_01115 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01120 PF07687 Peptidase dimerisation domain HF896_01120 PF01546 Peptidase family M20/M25/M40 HF896_01125 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01130 PF13193 AMP-binding enzyme C-terminal domain HF896_01130 PF00501 AMP-binding enzyme HF896_01135 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01140 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01145 PF01546 Peptidase family M20/M25/M40 HF896_01145 PF07687 Peptidase dimerisation domain HF896_01160 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_01160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_01160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_01175 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01185 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_01185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_01185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_01190 PF01039 Carboxyl transferase domain HF896_01195 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_01195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_01195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_01200 PF00378 Enoyl-CoA hydratase/isomerase HF896_01205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HF896_01205 PF00364 Biotin-requiring enzyme HF896_01205 PF02785 Biotin carboxylase C-terminal domain HF896_01205 PF00289 Biotin carboxylase, N-terminal domain HF896_01215 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01220 PF02515 CoA-transferase family III HF896_01225 PF03466 LysR substrate binding domain HF896_01225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_01230 PF02515 CoA-transferase family III HF896_01235 PF03466 LysR substrate binding domain HF896_01235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_01240 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01245 PF02515 CoA-transferase family III HF896_01250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HF896_01250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HF896_01260 PF06977 SdiA-regulated HF896_01265 PF00809 Pterin binding enzyme HF896_01265 PF02574 Homocysteine S-methyltransferase HF896_01265 PF02965 Vitamin B12 dependent methionine synthase, activation domain HF896_01265 PF02607 B12 binding domain HF896_01265 PF02310 B12 binding domain HF896_01270 PF18470 Cas9 alpha-helical lobe domain HF896_01270 PF18541 RuvC endonuclease subdomain 3 HF896_01270 PF13395 HNH endonuclease HF896_01280 PF09827 CRISPR associated protein Cas2 HF896_01290 PF01202 Shikimate kinase HF896_01305 PF00175 Oxidoreductase NAD-binding domain HF896_01305 PF00970 Oxidoreductase FAD-binding domain HF896_01310 PF13458 Periplasmic binding protein HF896_01315 PF02653 Branched-chain amino acid transport system / permease component HF896_01320 PF00005 ABC transporter HF896_01330 PF00593 TonB dependent receptor HF896_01330 PF07715 TonB-dependent Receptor Plug Domain HF896_01330 PF00593 TonB dependent receptor HF896_01330 PF07715 TonB-dependent Receptor Plug Domain HF896_01345 PF01078 Magnesium chelatase, subunit ChlI HF896_01345 PF13335 Magnesium chelatase, subunit ChlI C-terminal HF896_01355 PF00543 Nitrogen regulatory protein P-II HF896_01360 PF00909 Ammonium Transporter Family HF896_01365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_01365 PF03466 LysR substrate binding domain HF896_01370 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HF896_01370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HF896_01375 PF00171 Aldehyde dehydrogenase family HF896_01380 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01400 PF12697 Alpha/beta hydrolase family HF896_01410 PF05145 Transition state regulatory protein AbrB HF896_01415 PF03972 MmgE/PrpD family HF896_01420 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_01420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_01420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_01425 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01430 PF13607 Succinyl-CoA ligase like flavodoxin domain HF896_01430 PF13380 CoA binding domain HF896_01435 PF01565 FAD binding domain HF896_01445 PF13183 4Fe-4S dicluster domain HF896_01445 PF02754 Cysteine-rich domain HF896_01460 PF07690 Major Facilitator Superfamily HF896_01465 PF00842 Alanine racemase, C-terminal domain HF896_01465 PF01168 Alanine racemase, N-terminal domain HF896_01470 PF03150 Di-haem cytochrome c peroxidase HF896_01470 PF00034 Cytochrome c HF896_01475 PF14497 Glutathione S-transferase, C-terminal domain HF896_01475 PF02798 Glutathione S-transferase, N-terminal domain HF896_01480 PF18073 Rubredoxin metal binding domain HF896_01490 PF01425 Amidase HF896_01500 PF01063 Amino-transferase class IV HF896_01520 PF00535 Glycosyl transferase family 2 HF896_01520 PF01501 Glycosyl transferase family 8 HF896_01530 PF03060 Nitronate monooxygenase HF896_01535 PF03466 LysR substrate binding domain HF896_01535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_01540 PF06779 Uncharacterised MFS-type transporter YbfB HF896_01545 PF03473 MOSC domain HF896_01545 PF03475 3-alpha domain HF896_01565 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_01570 PF03466 LysR substrate binding domain HF896_01575 PF02515 CoA-transferase family III HF896_01580 PF00512 His Kinase A (phospho-acceptor) domain HF896_01580 PF00672 HAMP domain HF896_01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_01585 PF00486 Transcriptional regulatory protein, C terminal HF896_01585 PF00072 Response regulator receiver domain HF896_01590 PF07690 Major Facilitator Superfamily HF896_01605 PF01435 Peptidase family M48 HF896_01625 PF06505 Activator of aromatic catabolism HF896_01625 PF02830 V4R domain HF896_01625 PF02954 Bacterial regulatory protein, Fis family HF896_01625 PF00158 Sigma-54 interaction domain HF896_01630 PF06099 Phenol hydroxylase subunit HF896_01635 PF02332 Methane/Phenol/Toluene Hydroxylase HF896_01640 PF02406 MmoB/DmpM family HF896_01645 PF02332 Methane/Phenol/Toluene Hydroxylase HF896_01645 PF04945 YHS domain HF896_01650 PF01494 FAD binding domain HF896_01655 PF00970 Oxidoreductase FAD-binding domain HF896_01655 PF00111 2Fe-2S iron-sulfur cluster binding domain HF896_01655 PF00175 Oxidoreductase NAD-binding domain HF896_01660 PF00111 2Fe-2S iron-sulfur cluster binding domain HF896_01665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HF896_01670 PF03928 Haem-degrading HF896_01680 PF00171 Aldehyde dehydrogenase family HF896_01685 PF00561 alpha/beta hydrolase fold HF896_01695 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation HF896_01695 PF01118 Semialdehyde dehydrogenase, NAD binding domain HF896_01700 PF07836 DmpG-like communication domain HF896_01700 PF00682 HMGL-like HF896_01710 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01715 PF01361 Tautomerase enzyme HF896_01720 PF00753 Metallo-beta-lactamase superfamily HF896_01725 PF09339 IclR helix-turn-helix domain HF896_01725 PF01614 Bacterial transcriptional regulator HF896_01730 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01735 PF04909 Amidohydrolase HF896_01740 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01745 PF03737 Aldolase/RraA HF896_01750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HF896_01750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HF896_01755 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01760 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01765 PF04909 Amidohydrolase HF896_01770 PF08450 SMP-30/Gluconolactonase/LRE-like region HF896_01775 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HF896_01780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HF896_01785 PF00171 Aldehyde dehydrogenase family HF896_01790 PF09339 IclR helix-turn-helix domain HF896_01790 PF01614 Bacterial transcriptional regulator HF896_01810 PF02653 Branched-chain amino acid transport system / permease component HF896_01820 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_01820 PF00005 ABC transporter HF896_01825 PF00005 ABC transporter HF896_01835 PF07729 FCD domain HF896_01835 PF00392 Bacterial regulatory proteins, gntR family HF896_01840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_01840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_01840 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_01850 PF01636 Phosphotransferase enzyme family HF896_01855 PF03372 Endonuclease/Exonuclease/phosphatase family HF896_01860 PF00156 Phosphoribosyl transferase domain HF896_01870 PF02934 GatB/GatE catalytic domain HF896_01870 PF02637 GatB domain HF896_01875 PF01425 Amidase HF896_01880 PF02686 Glu-tRNAGln amidotransferase C subunit HF896_01895 PF04093 rod shape-determining protein MreD HF896_01900 PF03717 Penicillin-binding Protein dimerisation domain HF896_01900 PF00905 Penicillin binding protein transpeptidase domain HF896_01905 PF00491 Arginase family HF896_01910 PF01925 Sulfite exporter TauE/SafE HF896_01915 PF00732 GMC oxidoreductase HF896_01915 PF05199 GMC oxidoreductase HF896_01920 PF02405 Permease MlaE HF896_01925 PF00005 ABC transporter HF896_01930 PF02470 MlaD protein HF896_01940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_01940 PF03466 LysR substrate binding domain HF896_01945 PF00330 Aconitase family (aconitate hydratase) HF896_01950 PF03401 Tripartite tricarboxylate transporter family receptor HF896_01955 PF03737 Aldolase/RraA HF896_01960 PF01914 MarC family integral membrane protein HF896_01965 PF01738 Dienelactone hydrolase family HF896_01970 PF07690 Major Facilitator Superfamily HF896_01975 PF13533 Biotin-lipoyl like HF896_01980 PF02321 Outer membrane efflux protein HF896_01990 PF01544 CorA-like Mg2+ transporter protein HF896_01995 PF00490 Delta-aminolevulinic acid dehydratase HF896_02020 PF02129 X-Pro dipeptidyl-peptidase (S15 family) HF896_02025 PF07943 Penicillin-binding protein 5, C-terminal domain HF896_02025 PF00768 D-alanyl-D-alanine carboxypeptidase HF896_02030 PF00164 Ribosomal protein S12/S23 HF896_02035 PF00177 Ribosomal protein S7p/S5e HF896_02040 PF03764 Elongation factor G, domain IV HF896_02040 PF00679 Elongation factor G C-terminus HF896_02040 PF03144 Elongation factor Tu domain 2 HF896_02040 PF14492 Elongation Factor G, domain II HF896_02040 PF00009 Elongation factor Tu GTP binding domain HF896_02045 PF00009 Elongation factor Tu GTP binding domain HF896_02045 PF03143 Elongation factor Tu C-terminal domain HF896_02045 PF03144 Elongation factor Tu domain 2 HF896_02050 PF00338 Ribosomal protein S10p/S20e HF896_02055 PF00297 Ribosomal protein L3 HF896_02060 PF00573 Ribosomal protein L4/L1 family HF896_02065 PF00276 Ribosomal protein L23 HF896_02070 PF00181 Ribosomal Proteins L2, RNA binding domain HF896_02070 PF03947 Ribosomal Proteins L2, C-terminal domain HF896_02075 PF00203 Ribosomal protein S19 HF896_02080 PF00237 Ribosomal protein L22p/L17e HF896_02085 PF07650 KH domain HF896_02085 PF00189 Ribosomal protein S3, C-terminal domain HF896_02090 PF00252 Ribosomal protein L16p/L10e HF896_02095 PF00831 Ribosomal L29 protein HF896_02100 PF00366 Ribosomal protein S17 HF896_02105 PF00462 Glutaredoxin HF896_02105 PF08534 Redoxin HF896_02110 PF00583 Acetyltransferase (GNAT) family HF896_02120 PF00578 AhpC/TSA family HF896_02135 PF00381 PTS HPr component phosphorylation site HF896_02140 PF05524 PEP-utilising enzyme, N-terminal HF896_02140 PF00391 PEP-utilising enzyme, mobile domain HF896_02140 PF02896 PEP-utilising enzyme, TIM barrel domain HF896_02145 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HF896_02145 PF04055 Radical SAM superfamily HF896_02150 PF03099 Biotin/lipoate A/B protein ligase family HF896_02155 PF04359 Protein of unknown function (DUF493) HF896_02165 PF00119 ATP synthase A chain HF896_02170 PF00137 ATP synthase subunit C HF896_02175 PF00430 ATP synthase B/B' CF(0) HF896_02180 PF00213 ATP synthase delta (OSCP) subunit HF896_02185 PF02874 ATP synthase alpha/beta family, beta-barrel domain HF896_02185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HF896_02185 PF00306 ATP synthase alpha/beta chain, C terminal domain HF896_02190 PF00231 ATP synthase HF896_02195 PF02874 ATP synthase alpha/beta family, beta-barrel domain HF896_02195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HF896_02200 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HF896_02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_02220 PF03466 LysR substrate binding domain HF896_02250 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HF896_02255 PF02321 Outer membrane efflux protein HF896_02260 PF00873 AcrB/AcrD/AcrF family HF896_02265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF896_02265 PF00529 HlyD membrane-fusion protein of T1SS HF896_02270 PF00440 Bacterial regulatory proteins, tetR family HF896_02270 PF08361 MAATS-type transcriptional repressor, C-terminal region HF896_02295 PF03143 Elongation factor Tu C-terminal domain HF896_02295 PF03144 Elongation factor Tu domain 2 HF896_02295 PF00009 Elongation factor Tu GTP binding domain HF896_02305 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HF896_02310 PF02357 Transcription termination factor nusG HF896_02310 PF00467 KOW motif HF896_02315 PF03946 Ribosomal protein L11, N-terminal domain HF896_02315 PF00298 Ribosomal protein L11, RNA binding domain HF896_02320 PF00687 Ribosomal protein L1p/L10e family HF896_02325 PF00466 Ribosomal protein L10 HF896_02330 PF16320 Ribosomal protein L7/L12 dimerisation domain HF896_02330 PF00542 Ribosomal protein L7/L12 C-terminal domain HF896_02335 PF04560 RNA polymerase Rpb2, domain 7 HF896_02335 PF04563 RNA polymerase beta subunit HF896_02335 PF04565 RNA polymerase Rpb2, domain 3 HF896_02335 PF04561 RNA polymerase Rpb2, domain 2 HF896_02335 PF10385 RNA polymerase beta subunit external 1 domain HF896_02335 PF00562 RNA polymerase Rpb2, domain 6 HF896_02340 PF04998 RNA polymerase Rpb1, domain 5 HF896_02340 PF04983 RNA polymerase Rpb1, domain 3 HF896_02340 PF00623 RNA polymerase Rpb1, domain 2 HF896_02340 PF04997 RNA polymerase Rpb1, domain 1 HF896_02340 PF05000 RNA polymerase Rpb1, domain 4 HF896_02350 PF01189 16S rRNA methyltransferase RsmB/F HF896_02350 PF01029 NusB family HF896_02360 PF00672 HAMP domain HF896_02360 PF00989 PAS fold HF896_02360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_02360 PF00512 His Kinase A (phospho-acceptor) domain HF896_02365 PF00072 Response regulator receiver domain HF896_02365 PF00158 Sigma-54 interaction domain HF896_02365 PF02954 Bacterial regulatory protein, Fis family HF896_02400 PF00665 Integrase core domain HF896_02405 PF01695 IstB-like ATP binding protein HF896_02445 PF09369 Domain of unknown function (DUF1998) HF896_02445 PF00270 DEAD/DEAH box helicase HF896_02445 PF00271 Helicase conserved C-terminal domain HF896_02455 PF00271 Helicase conserved C-terminal domain HF896_02455 PF12137 RNA polymerase recycling family C-terminal HF896_02455 PF18339 RapA N-terminal Tudor like domain 1 HF896_02455 PF18337 RapA N-terminal Tudor like domain HF896_02455 PF00176 SNF2 family N-terminal domain HF896_02460 PF02384 N-6 DNA Methylase HF896_02460 PF12161 HsdM N-terminal domain HF896_02465 PF13286 Phosphohydrolase-associated domain HF896_02465 PF01966 HD domain HF896_02515 PF00589 Phage integrase family HF896_02515 PF13356 Arm DNA-binding domain HF896_02545 PF10711 Hypothetical protein (DUF2513) HF896_02550 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HF896_02565 PF06067 Domain of unknown function (DUF932) HF896_02570 PF02195 ParB-like nuclease domain HF896_02590 PF05284 Protein of unknown function (DUF736) HF896_02595 PF01556 DnaJ C terminal domain HF896_02595 PF00684 DnaJ central domain HF896_02595 PF00226 DnaJ domain HF896_02600 PF00872 Transposase, Mutator family HF896_02640 PF13614 AAA domain HF896_02655 PF10502 Signal peptidase, peptidase S26 HF896_02665 PF07732 Multicopper oxidase HF896_02665 PF07731 Multicopper oxidase HF896_02675 PF00512 His Kinase A (phospho-acceptor) domain HF896_02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_02675 PF00672 HAMP domain HF896_02680 PF00486 Transcriptional regulatory protein, C terminal HF896_02680 PF00072 Response regulator receiver domain HF896_02685 PF07732 Multicopper oxidase HF896_02685 PF00394 Multicopper oxidase HF896_02685 PF07731 Multicopper oxidase HF896_02690 PF05275 Copper resistance protein B precursor (CopB) HF896_02720 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HF896_02720 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HF896_02725 PF11339 Protein of unknown function (DUF3141) HF896_02730 PF04945 YHS domain HF896_02750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF896_02755 PF00873 AcrB/AcrD/AcrF family HF896_02760 PF03466 LysR substrate binding domain HF896_02760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_02780 PF00437 Type II/IV secretion system protein HF896_02785 PF04956 TrbC/VIRB2 family HF896_02795 PF03135 CagE, TrbE, VirB family, component of type IV transporter system HF896_02805 PF04610 TrbL/VirB6 plasmid conjugal transfer protein HF896_02815 PF03524 Conjugal transfer protein HF896_02820 PF03743 Bacterial conjugation TrbI-like protein HF896_02865 PF12728 Helix-turn-helix domain HF896_02880 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HF896_02880 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HF896_02880 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HF896_02885 PF01370 NAD dependent epimerase/dehydratase family HF896_02890 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase HF896_02905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HF896_02910 PF02021 Uncharacterised protein family UPF0102 HF896_02915 PF13580 SIS domain HF896_02925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HF896_02925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HF896_02930 PF00437 Type II/IV secretion system protein HF896_02935 PF00027 Cyclic nucleotide-binding domain HF896_02935 PF13545 Crp-like helix-turn-helix domain HF896_02940 PF00437 Type II/IV secretion system protein HF896_02945 PF01168 Alanine racemase, N-terminal domain HF896_02965 PF02913 FAD linked oxidases, C-terminal domain HF896_02965 PF01565 FAD binding domain HF896_02970 PF03466 LysR substrate binding domain HF896_02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_02975 PF00551 Formyl transferase HF896_02980 PF08447 PAS fold HF896_02980 PF08448 PAS fold HF896_02980 PF00990 Diguanylate cyclase, GGDEF domain HF896_02980 PF00563 EAL domain HF896_02990 PF03477 ATP cone domain HF896_02990 PF02867 Ribonucleotide reductase, barrel domain HF896_02990 PF00317 Ribonucleotide reductase, all-alpha domain HF896_02995 PF07730 Histidine kinase HF896_03000 PF00196 Bacterial regulatory proteins, luxR family HF896_03000 PF00072 Response regulator receiver domain HF896_03005 PF07690 Major Facilitator Superfamily HF896_03010 PF07690 Major Facilitator Superfamily HF896_03015 PF14710 Respiratory nitrate reductase alpha N-terminal HF896_03015 PF00384 Molybdopterin oxidoreductase HF896_03015 PF01568 Molydopterin dinucleotide binding domain HF896_03020 PF14711 Respiratory nitrate reductase beta C-terminal HF896_03020 PF13247 4Fe-4S dicluster domain HF896_03025 PF02613 Nitrate reductase delta subunit HF896_03030 PF02665 Nitrate reductase gamma subunit HF896_03040 PF00484 Carbonic anhydrase HF896_03055 PF01814 Hemerythrin HHE cation binding domain HF896_03080 PF01568 Molydopterin dinucleotide binding domain HF896_03080 PF00384 Molybdopterin oxidoreductase HF896_03080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HF896_03090 PF03328 HpcH/HpaI aldolase/citrate lyase family HF896_03095 PF02515 CoA-transferase family III HF896_03100 PF01575 MaoC like domain HF896_03105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_03105 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_03105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_03110 PF01575 MaoC like domain HF896_03120 PF03328 HpcH/HpaI aldolase/citrate lyase family HF896_03130 PF07687 Peptidase dimerisation domain HF896_03130 PF01546 Peptidase family M20/M25/M40 HF896_03145 PF03352 Methyladenine glycosylase HF896_03165 PF03401 Tripartite tricarboxylate transporter family receptor HF896_03170 PF03401 Tripartite tricarboxylate transporter family receptor HF896_03175 PF14535 AMP-binding enzyme C-terminal domain HF896_03175 PF00501 AMP-binding enzyme HF896_03180 PF00005 ABC transporter HF896_03195 PF02653 Branched-chain amino acid transport system / permease component HF896_03200 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_03200 PF00005 ABC transporter HF896_03205 PF00501 AMP-binding enzyme HF896_03210 PF01471 Putative peptidoglycan binding domain HF896_03210 PF13401 AAA domain HF896_03220 PF13545 Crp-like helix-turn-helix domain HF896_03220 PF00027 Cyclic nucleotide-binding domain HF896_03225 PF00849 RNA pseudouridylate synthase HF896_03225 PF01479 S4 domain HF896_03230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_03230 PF00183 Hsp90 protein HF896_03240 PF03401 Tripartite tricarboxylate transporter family receptor HF896_03245 PF01636 Phosphotransferase enzyme family HF896_03250 PF03793 PASTA domain HF896_03250 PF00069 Protein kinase domain HF896_03260 PF02515 CoA-transferase family III HF896_03270 PF03401 Tripartite tricarboxylate transporter family receptor HF896_03275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HF896_03275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HF896_03280 PF00732 GMC oxidoreductase HF896_03280 PF05199 GMC oxidoreductase HF896_03295 PF01061 ABC-2 type transporter HF896_03300 PF00005 ABC transporter HF896_03305 PF07519 Tannase and feruloyl esterase HF896_03310 PF01048 Phosphorylase superfamily HF896_03310 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus HF896_03315 PF03707 Bacterial signalling protein N terminal repeat HF896_03315 PF00990 Diguanylate cyclase, GGDEF domain HF896_03315 PF13188 PAS domain HF896_03315 PF00563 EAL domain HF896_03320 PF01545 Cation efflux family HF896_03320 PF16916 Dimerisation domain of Zinc Transporter HF896_03325 PF02580 D-Tyr-tRNA(Tyr) deacylase HF896_03330 PF01925 Sulfite exporter TauE/SafE HF896_03335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_03335 PF03466 LysR substrate binding domain HF896_03340 PF03401 Tripartite tricarboxylate transporter family receptor HF896_03345 PF02515 CoA-transferase family III HF896_03350 PF08240 Alcohol dehydrogenase GroES-like domain HF896_03350 PF00107 Zinc-binding dehydrogenase HF896_03355 PF13193 AMP-binding enzyme C-terminal domain HF896_03355 PF00501 AMP-binding enzyme HF896_03360 PF02130 Uncharacterized protein family UPF0054 HF896_03365 PF02562 PhoH-like protein HF896_03370 PF07499 RuvA, C-terminal domain HF896_03370 PF01330 RuvA N terminal domain HF896_03380 PF00012 Hsp70 protein HF896_03385 PF00012 Hsp70 protein HF896_03395 PF05496 Holliday junction DNA helicase RuvB P-loop domain HF896_03395 PF17864 RuvB AAA lid domain HF896_03395 PF05491 RuvB C-terminal winged helix domain HF896_03400 PF02308 MgtC family HF896_03415 PF01168 Alanine racemase, N-terminal domain HF896_03415 PF14031 Putative serine dehydratase domain HF896_03420 PF00300 Histidine phosphatase superfamily (branch 1) HF896_03430 PF01171 PP-loop family HF896_03465 PF00480 ROK family HF896_03470 PF00982 Glycosyltransferase family 20 HF896_03475 PF00723 Glycosyl hydrolases family 15 HF896_03480 PF02358 Trehalose-phosphatase HF896_03485 PF00085 Thioredoxin HF896_03490 PF01743 Poly A polymerase head domain HF896_03490 PF12627 Probable RNA and SrmB- binding site of polymerase A HF896_03490 PF01966 HD domain HF896_03495 PF00158 Sigma-54 interaction domain HF896_03495 PF01590 GAF domain HF896_03495 PF02954 Bacterial regulatory protein, Fis family HF896_03510 PF03401 Tripartite tricarboxylate transporter family receptor HF896_03525 PF01812 5-formyltetrahydrofolate cyclo-ligase family HF896_03530 PF01464 Transglycosylase SLT domain HF896_03530 PF10145 Phage-related minor tail protein HF896_03530 PF01551 Peptidase family M23 HF896_03545 PF18331 PKHD-type hydroxylase C-terminal domain HF896_03545 PF13640 2OG-Fe(II) oxygenase superfamily HF896_03550 PF01070 FMN-dependent dehydrogenase HF896_03555 PF00593 TonB dependent receptor HF896_03555 PF07715 TonB-dependent Receptor Plug Domain HF896_03565 PF00501 AMP-binding enzyme HF896_03565 PF13193 AMP-binding enzyme C-terminal domain HF896_03575 PF02801 Beta-ketoacyl synthase, C-terminal domain HF896_03575 PF00109 Beta-ketoacyl synthase, N-terminal domain HF896_03580 PF07977 FabA-like domain HF896_03585 PF00795 Carbon-nitrogen hydrolase HF896_03590 PF03471 Transporter associated domain HF896_03590 PF00571 CBS domain HF896_03600 PF01037 Lrp/AsnC ligand binding domain HF896_03605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HF896_03610 PF00351 Biopterin-dependent aromatic amino acid hydroxylase HF896_03615 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal HF896_03615 PF00676 Dehydrogenase E1 component HF896_03620 PF02779 Transketolase, pyrimidine binding domain HF896_03620 PF02780 Transketolase, C-terminal domain HF896_03625 PF02817 e3 binding domain HF896_03625 PF00364 Biotin-requiring enzyme HF896_03625 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HF896_03630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HF896_03630 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_03635 PF02091 Glycyl-tRNA synthetase alpha subunit HF896_03640 PF05746 DALR anticodon binding domain HF896_03640 PF02092 Glycyl-tRNA synthetase beta subunit HF896_03650 PF01553 Acyltransferase HF896_03665 PF01476 LysM domain HF896_03665 PF04972 BON domain HF896_03670 PF03309 Type III pantothenate kinase HF896_03675 PF00440 Bacterial regulatory proteins, tetR family HF896_03675 PF08361 MAATS-type transcriptional repressor, C-terminal region HF896_03685 PF16363 GDP-mannose 4,6 dehydratase HF896_03690 PF04321 RmlD substrate binding domain HF896_03695 PF00483 Nucleotidyl transferase HF896_03700 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HF896_03710 PF00535 Glycosyl transferase family 2 HF896_03715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HF896_03715 PF00437 Type II/IV secretion system protein HF896_03720 PF00482 Type II secretion system (T2SS), protein F HF896_03730 PF00114 Pilin (bacterial filament) HF896_03730 PF07963 Prokaryotic N-terminal methylation motif HF896_03740 PF11612 Type II secretion system (T2SS), protein J HF896_03740 PF07963 Prokaryotic N-terminal methylation motif HF896_03745 PF03934 Type II secretion system (T2SS), protein K HF896_03765 PF00263 Bacterial type II and III secretion system protein HF896_03765 PF03958 Bacterial type II/III secretion system short domain HF896_03795 PF00535 Glycosyl transferase family 2 HF896_03805 PF01061 ABC-2 type transporter HF896_03810 PF00005 ABC transporter HF896_03810 PF14524 Wzt C-terminal domain HF896_03820 PF00398 Ribosomal RNA adenine dimethylase HF896_03825 PF01551 Peptidase family M23 HF896_03825 PF10145 Phage-related minor tail protein HF896_03825 PF01464 Transglycosylase SLT domain HF896_03835 PF00696 Amino acid kinase family HF896_03850 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_03850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_03850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_03850 PF12806 Acetyl-CoA dehydrogenase C-terminal like HF896_03860 PF00378 Enoyl-CoA hydratase/isomerase HF896_03860 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HF896_03860 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HF896_03865 PF00108 Thiolase, N-terminal domain HF896_03865 PF02803 Thiolase, C-terminal domain HF896_03875 PF00378 Enoyl-CoA hydratase/isomerase HF896_03885 PF03061 Thioesterase superfamily HF896_03890 PF00664 ABC transporter transmembrane region HF896_03890 PF00005 ABC transporter HF896_03915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_03915 PF03466 LysR substrate binding domain HF896_03925 PF03480 Bacterial extracellular solute-binding protein, family 7 HF896_03930 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HF896_03935 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HF896_03940 PF03466 LysR substrate binding domain HF896_03940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_03945 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF896_03950 PF00528 Binding-protein-dependent transport system inner membrane component HF896_03955 PF00528 Binding-protein-dependent transport system inner membrane component HF896_03960 PF00005 ABC transporter HF896_03965 PF02423 Ornithine cyclodeaminase/mu-crystallin family HF896_03975 PF03144 Elongation factor Tu domain 2 HF896_03975 PF00009 Elongation factor Tu GTP binding domain HF896_03975 PF16658 Class II release factor RF3, C-terminal domain HF896_03985 PF05221 S-adenosyl-L-homocysteine hydrolase HF896_03985 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HF896_03990 PF01728 FtsJ-like methyltransferase HF896_03990 PF01479 S4 domain HF896_03995 PF02219 Methylenetetrahydrofolate reductase HF896_04000 PF03330 Lytic transglycolase HF896_04005 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HF896_04010 PF08308 PEGA domain HF896_04010 PF00069 Protein kinase domain HF896_04015 PF00572 Ribosomal protein L13 HF896_04020 PF00380 Ribosomal protein S9/S16 HF896_04025 PF01521 Iron-sulphur cluster biosynthesis HF896_04040 PF00665 Integrase core domain HF896_04045 PF01695 IstB-like ATP binding protein HF896_04090 PF06067 Domain of unknown function (DUF932) HF896_04095 PF02195 ParB-like nuclease domain HF896_04110 PF05284 Protein of unknown function (DUF736) HF896_04145 PF13614 AAA domain HF896_04160 PF10502 Signal peptidase, peptidase S26 HF896_04170 PF13411 MerR HTH family regulatory protein HF896_04175 PF00403 Heavy-metal-associated domain HF896_04190 PF00672 HAMP domain HF896_04190 PF00512 His Kinase A (phospho-acceptor) domain HF896_04190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_04195 PF00072 Response regulator receiver domain HF896_04195 PF00486 Transcriptional regulatory protein, C terminal HF896_04210 PF02321 Outer membrane efflux protein HF896_04215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF896_04215 PF00529 HlyD membrane-fusion protein of T1SS HF896_04220 PF00873 AcrB/AcrD/AcrF family HF896_04225 PF03466 LysR substrate binding domain HF896_04225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_04240 PF00665 Integrase core domain HF896_04245 PF01695 IstB-like ATP binding protein HF896_04260 PF03702 Anhydro-N-acetylmuramic acid kinase HF896_04265 PF04225 Opacity-associated protein A LysM-like domain HF896_04265 PF01551 Peptidase family M23 HF896_04270 PF01479 S4 domain HF896_04270 PF00579 tRNA synthetases class I (W and Y) HF896_04275 PF03466 LysR substrate binding domain HF896_04275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_04280 PF12804 MobA-like NTP transferase domain HF896_04280 PF00132 Bacterial transferase hexapeptide (six repeats) HF896_04285 PF13493 Domain of unknown function (DUF4118) HF896_04285 PF13492 GAF domain HF896_04285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_04285 PF02702 Osmosensitive K+ channel His kinase sensor domain HF896_04285 PF00512 His Kinase A (phospho-acceptor) domain HF896_04295 PF00226 DnaJ domain HF896_04295 PF01556 DnaJ C terminal domain HF896_04300 PF01037 Lrp/AsnC ligand binding domain HF896_04305 PF01380 SIS domain HF896_04315 PF00174 Oxidoreductase molybdopterin binding domain HF896_04320 PF01292 Prokaryotic cytochrome b561 HF896_04325 PF00486 Transcriptional regulatory protein, C terminal HF896_04325 PF00072 Response regulator receiver domain HF896_04330 PF00989 PAS fold HF896_04330 PF00672 HAMP domain HF896_04330 PF18698 Histidine kinase sensor domain HF896_04330 PF00512 His Kinase A (phospho-acceptor) domain HF896_04330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_04345 PF01050 Mannose-6-phosphate isomerase HF896_04345 PF00483 Nucleotidyl transferase HF896_04360 PF13614 AAA domain HF896_04370 PF13401 AAA domain HF896_04370 PF01471 Putative peptidoglycan binding domain HF896_04395 PF13537 Glutamine amidotransferase domain HF896_04395 PF00733 Asparagine synthase HF896_04400 PF00534 Glycosyl transferases group 1 HF896_04400 PF13439 Glycosyltransferase Family 4 HF896_04410 PF02350 UDP-N-acetylglucosamine 2-epimerase HF896_04415 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HF896_04415 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HF896_04415 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HF896_04420 PF00534 Glycosyl transferases group 1 HF896_04420 PF13439 Glycosyltransferase Family 4 HF896_04450 PF00535 Glycosyl transferase family 2 HF896_04495 PF00501 AMP-binding enzyme HF896_04495 PF13193 AMP-binding enzyme C-terminal domain HF896_04500 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HF896_04500 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HF896_04505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_04505 PF00672 HAMP domain HF896_04505 PF00512 His Kinase A (phospho-acceptor) domain HF896_04510 PF00072 Response regulator receiver domain HF896_04510 PF00158 Sigma-54 interaction domain HF896_04510 PF02954 Bacterial regulatory protein, Fis family HF896_04525 PF00892 EamA-like transporter family HF896_04530 PF01040 UbiA prenyltransferase family HF896_04535 PF03466 LysR substrate binding domain HF896_04535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_04540 PF03401 Tripartite tricarboxylate transporter family receptor HF896_04550 PF01176 Translation initiation factor 1A / IF-1 HF896_04555 PF13532 2OG-Fe(II) oxygenase superfamily HF896_04560 PF13193 AMP-binding enzyme C-terminal domain HF896_04560 PF00501 AMP-binding enzyme HF896_04565 PF00175 Oxidoreductase NAD-binding domain HF896_04565 PF00111 2Fe-2S iron-sulfur cluster binding domain HF896_04565 PF00970 Oxidoreductase FAD-binding domain HF896_04585 PF05981 CreA protein HF896_04590 PF02875 Mur ligase family, glutamate ligase domain HF896_04590 PF08245 Mur ligase middle domain HF896_04590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HF896_04595 PF02875 Mur ligase family, glutamate ligase domain HF896_04595 PF08245 Mur ligase middle domain HF896_04595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HF896_04600 PF00664 ABC transporter transmembrane region HF896_04600 PF00005 ABC transporter HF896_04615 PF14492 Elongation Factor G, domain II HF896_04615 PF03144 Elongation factor Tu domain 2 HF896_04615 PF00009 Elongation factor Tu GTP binding domain HF896_04615 PF03764 Elongation factor G, domain IV HF896_04615 PF00679 Elongation factor G C-terminus HF896_04625 PF00482 Type II secretion system (T2SS), protein F HF896_04630 PF00296 Luciferase-like monooxygenase HF896_04640 PF00437 Type II/IV secretion system protein HF896_04645 PF03958 Bacterial type II/III secretion system short domain HF896_04645 PF00263 Bacterial type II and III secretion system protein HF896_04670 PF07963 Prokaryotic N-terminal methylation motif HF896_04670 PF11612 Type II secretion system (T2SS), protein J HF896_04675 PF02501 Type II secretion system (T2SS), protein I HF896_04675 PF07963 Prokaryotic N-terminal methylation motif HF896_04685 PF08334 Type II secretion system (T2SS), protein G HF896_04685 PF07963 Prokaryotic N-terminal methylation motif HF896_04700 PF02654 Cobalamin-5-phosphate synthase HF896_04705 PF00291 Pyridoxal-phosphate dependent enzyme HF896_04705 PF00585 C-terminal regulatory domain of Threonine dehydratase HF896_04710 PF02566 OsmC-like protein HF896_04715 PF03232 Ubiquinone biosynthesis protein COQ7 HF896_04720 PF13609 Gram-negative porin HF896_04730 PF00528 Binding-protein-dependent transport system inner membrane component HF896_04735 PF01546 Peptidase family M20/M25/M40 HF896_04735 PF07687 Peptidase dimerisation domain HF896_04740 PF12911 N-terminal TM domain of oligopeptide transport permease C HF896_04740 PF00528 Binding-protein-dependent transport system inner membrane component HF896_04745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF896_04745 PF00005 ABC transporter HF896_04750 PF00005 ABC transporter HF896_04750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF896_04755 PF01161 Phosphatidylethanolamine-binding protein HF896_04760 PF01418 Helix-turn-helix domain, rpiR family HF896_04760 PF01380 SIS domain HF896_04760 PF02685 Glucokinase HF896_04765 PF00923 Transaldolase/Fructose-6-phosphate aldolase HF896_04770 PF00342 Phosphoglucose isomerase HF896_04775 PF00118 TCP-1/cpn60 chaperonin family HF896_04780 PF00166 Chaperonin 10 Kd subunit HF896_04785 PF01467 Cytidylyltransferase-like HF896_04790 PF02772 S-adenosylmethionine synthetase, central domain HF896_04790 PF00438 S-adenosylmethionine synthetase, N-terminal domain HF896_04790 PF02773 S-adenosylmethionine synthetase, C-terminal domain HF896_04800 PF03279 Bacterial lipid A biosynthesis acyltransferase HF896_04805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_04805 PF03466 LysR substrate binding domain HF896_04810 PF03401 Tripartite tricarboxylate transporter family receptor HF896_04815 PF03401 Tripartite tricarboxylate transporter family receptor HF896_04820 PF00180 Isocitrate/isopropylmalate dehydrogenase HF896_04825 PF04909 Amidohydrolase HF896_04830 PF01926 50S ribosome-binding GTPase HF896_04835 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HF896_04840 PF05140 ResB-like family HF896_04845 PF01578 Cytochrome C assembly protein HF896_04850 PF00174 Oxidoreductase molybdopterin binding domain HF896_04855 PF01794 Ferric reductase like transmembrane component HF896_04865 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HF896_04865 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HF896_04875 PF01491 Frataxin-like domain HF896_04880 PF00912 Transglycosylase HF896_04880 PF17092 Penicillin-binding protein OB-like domain HF896_04880 PF00905 Penicillin binding protein transpeptidase domain HF896_04905 PF07660 Secretin and TonB N terminus short domain HF896_04905 PF11741 AMIN domain HF896_04905 PF00263 Bacterial type II and III secretion system protein HF896_04905 PF03958 Bacterial type II/III secretion system short domain HF896_04910 PF00746 LPXTG cell wall anchor motif HF896_04915 PF01761 3-dehydroquinate synthase HF896_04920 PF01966 HD domain HF896_04920 PF13286 Phosphohydrolase-associated domain HF896_04935 PF00171 Aldehyde dehydrogenase family HF896_04945 PF03466 LysR substrate binding domain HF896_04945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_04955 PF01645 Conserved region in glutamate synthase HF896_04955 PF04898 Glutamate synthase central domain HF896_04955 PF00310 Glutamine amidotransferases class-II HF896_04955 PF01493 GXGXG motif HF896_04960 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HF896_04960 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_04970 PF00528 Binding-protein-dependent transport system inner membrane component HF896_04985 PF17284 Spermidine synthase tetramerisation domain HF896_04990 PF02675 S-adenosylmethionine decarboxylase HF896_04995 PF00005 ABC transporter HF896_05000 PF02405 Permease MlaE HF896_05005 PF02470 MlaD protein HF896_05025 PF00990 Diguanylate cyclase, GGDEF domain HF896_05025 PF00072 Response regulator receiver domain HF896_05030 PF00005 ABC transporter HF896_05035 PF01061 ABC-2 type transporter HF896_05040 PF01722 BolA-like protein HF896_05045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HF896_05050 PF01634 ATP phosphoribosyltransferase HF896_05055 PF00815 Histidinol dehydrogenase HF896_05070 PF00155 Aminotransferase class I and II HF896_05075 PF00475 Imidazoleglycerol-phosphate dehydratase HF896_05080 PF00117 Glutamine amidotransferase class-I HF896_05085 PF00977 Histidine biosynthesis protein HF896_05100 PF00534 Glycosyl transferases group 1 HF896_05100 PF17101 Stealth protein CR1, conserved region 1 HF896_05100 PF11380 Stealth protein CR2, conserved region 2 HF896_05100 PF17102 Stealth protein CR3, conserved region 3 HF896_05100 PF17103 Stealth protein CR4, conserved region 4 HF896_05130 PF16363 GDP-mannose 4,6 dehydratase HF896_05135 PF00977 Histidine biosynthesis protein HF896_05140 PF01502 Phosphoribosyl-AMP cyclohydrolase HF896_05145 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HF896_05160 PF01230 HIT domain HF896_05165 PF02416 mttA/Hcf106 family HF896_05170 PF02416 mttA/Hcf106 family HF896_05175 PF00902 Sec-independent protein translocase protein (TatC) HF896_05180 PF13180 PDZ domain HF896_05180 PF17820 PDZ domain HF896_05185 PF01784 NIF3 (NGG1p interacting factor 3) HF896_05190 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HF896_05195 PF01741 Large-conductance mechanosensitive channel, MscL HF896_05200 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HF896_05200 PF00355 Rieske [2Fe-2S] domain HF896_05205 PF00033 Cytochrome b/b6/petB HF896_05205 PF00032 Cytochrome b(C-terminal)/b6/petD HF896_05210 PF02167 Cytochrome C1 family HF896_05215 PF02798 Glutathione S-transferase, N-terminal domain HF896_05215 PF00043 Glutathione S-transferase, C-terminal domain HF896_05220 PF04386 Stringent starvation protein B HF896_05235 PF01043 SecA preprotein cross-linking domain HF896_05235 PF07516 SecA Wing and Scaffold domain HF896_05235 PF07517 SecA DEAD-like domain HF896_05235 PF02810 SEC-C motif HF896_05240 PF01960 ArgJ family HF896_05250 PF00293 NUDIX domain HF896_05255 PF03884 DNA gyrase inhibitor YacG HF896_05260 PF07072 Cell division protein HF896_05265 PF01121 Dephospho-CoA kinase HF896_05270 PF06750 Bacterial Peptidase A24 N-terminal domain HF896_05270 PF01478 Type IV leader peptidase family HF896_05275 PF00482 Type II secretion system (T2SS), protein F HF896_05280 PF00437 Type II/IV secretion system protein HF896_05280 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HF896_05285 PF00589 Phage integrase family HF896_05315 PF13362 Toprim domain HF896_05315 PF18818 Metallopeptidase superfamily domain HF896_05315 PF08401 Domain of unknown function (DUF1738) HF896_05360 PF00348 Polyprenyl synthetase HF896_05365 PF00829 Ribosomal prokaryotic L21 protein HF896_05370 PF01016 Ribosomal L27 protein HF896_05375 PF01926 50S ribosome-binding GTPase HF896_05375 PF01018 GTP1/OBG HF896_05380 PF00696 Amino acid kinase family HF896_05380 PF01472 PUA domain HF896_05385 PF00293 NUDIX domain HF896_05390 PF04073 Aminoacyl-tRNA editing domain HF896_05390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HF896_05390 PF03129 Anticodon binding domain HF896_05395 PF01464 Transglycosylase SLT domain HF896_05395 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HF896_05400 PF00571 CBS domain HF896_05400 PF01595 Cyclin M transmembrane N-terminal domain HF896_05400 PF03471 Transporter associated domain HF896_05405 PF02190 ATP-dependent protease La (LON) substrate-binding domain HF896_05405 PF00004 ATPase family associated with various cellular activities (AAA) HF896_05405 PF05362 Lon protease (S16) C-terminal proteolytic domain HF896_05410 PF00462 Glutaredoxin HF896_05415 PF17827 PrmC N-terminal domain HF896_05415 PF05175 Methyltransferase small domain HF896_05420 PF00472 RF-1 domain HF896_05420 PF03462 PCRF domain HF896_05425 PF01488 Shikimate / quinate 5-dehydrogenase HF896_05425 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HF896_05425 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HF896_05435 PF03466 LysR substrate binding domain HF896_05435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_05440 PF03401 Tripartite tricarboxylate transporter family receptor HF896_05450 PF00924 Mechanosensitive ion channel HF896_05450 PF12795 Mechanosensitive ion channel porin domain HF896_05450 PF12794 Mechanosensitive ion channel inner membrane domain 1 HF896_05455 PF03009 Glycerophosphoryl diester phosphodiesterase family HF896_05460 PF00005 ABC transporter HF896_05460 PF17912 MalK OB fold domain HF896_05465 PF00528 Binding-protein-dependent transport system inner membrane component HF896_05470 PF00528 Binding-protein-dependent transport system inner membrane component HF896_05475 PF13416 Bacterial extracellular solute-binding protein HF896_05480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HF896_05480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HF896_05500 PF01209 ubiE/COQ5 methyltransferase family HF896_05515 PF03109 ABC1 family HF896_05535 PF01336 OB-fold nucleic acid binding domain HF896_05535 PF00152 tRNA synthetases class II (D, K and N) HF896_05535 PF02938 GAD domain HF896_05550 PF13091 PLD-like domain HF896_05555 PF01227 GTP cyclohydrolase I HF896_05570 PF00989 PAS fold HF896_05570 PF00512 His Kinase A (phospho-acceptor) domain HF896_05570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_05575 PF00196 Bacterial regulatory proteins, luxR family HF896_05575 PF00072 Response regulator receiver domain HF896_05580 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HF896_05595 PF01810 LysE type translocator HF896_05600 PF01425 Amidase HF896_05605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF896_05610 PF00005 ABC transporter HF896_05610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF896_05615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF896_05615 PF00005 ABC transporter HF896_05620 PF12911 N-terminal TM domain of oligopeptide transport permease C HF896_05620 PF00528 Binding-protein-dependent transport system inner membrane component HF896_05625 PF00528 Binding-protein-dependent transport system inner membrane component HF896_05630 PF00037 4Fe-4S binding domain HF896_05635 PF01195 Peptidyl-tRNA hydrolase HF896_05640 PF14693 Ribosomal protein TL5, C-terminal domain HF896_05640 PF01386 Ribosomal L25p family HF896_05645 PF14572 Phosphoribosyl synthetase-associated domain HF896_05645 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HF896_05655 PF08544 GHMP kinases C terminal HF896_05655 PF00288 GHMP kinases N terminal domain HF896_05670 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HF896_05670 PF06827 Zinc finger found in FPG and IleRS HF896_05670 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HF896_05680 PF00633 Helix-hairpin-helix motif HF896_05680 PF00730 HhH-GPD superfamily base excision DNA repair protein HF896_05680 PF14815 NUDIX domain HF896_05690 PF03668 P-loop ATPase protein family HF896_05695 PF02463 RecF/RecN/SMC N terminal domain HF896_05700 PF01513 ATP-NAD kinase HF896_05705 PF01628 HrcA protein C terminal domain HF896_05705 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HF896_05725 PF06969 HemN C-terminal domain HF896_05725 PF04055 Radical SAM superfamily HF896_05730 PF01725 Ham1 family HF896_05735 PF03725 3' exoribonuclease family, domain 2 HF896_05735 PF01138 3' exoribonuclease family, domain 1 HF896_05745 PF00069 Protein kinase domain HF896_05745 PF03793 PASTA domain HF896_05750 PF08340 Domain of unknown function (DUF1732) HF896_05750 PF03755 YicC-like family, N-terminal region HF896_05820 PF00004 ATPase family associated with various cellular activities (AAA) HF896_05820 PF16450 Proteasomal ATPase OB C-terminal domain HF896_05820 PF17758 Proteasomal ATPase OB N-terminal domain HF896_05850 PF00625 Guanylate kinase HF896_05855 PF01192 RNA polymerase Rpb6 HF896_05860 PF13291 ACT domain HF896_05860 PF04607 Region found in RelA / SpoT proteins HF896_05860 PF02824 TGS domain HF896_05865 PF01272 Transcription elongation factor, GreA/GreB, C-term HF896_05865 PF03449 Transcription elongation factor, N-terminal HF896_05880 PF00312 Ribosomal protein S15 HF896_05885 PF00575 S1 RNA binding domain HF896_05885 PF00013 KH domain HF896_05885 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HF896_05885 PF01138 3' exoribonuclease family, domain 1 HF896_05885 PF03725 3' exoribonuclease family, domain 2 HF896_05890 PF14765 Polyketide synthase dehydratase HF896_05890 PF00550 Phosphopantetheine attachment site HF896_05890 PF00109 Beta-ketoacyl synthase, N-terminal domain HF896_05890 PF16197 Ketoacyl-synthetase C-terminal extension HF896_05890 PF02801 Beta-ketoacyl synthase, C-terminal domain HF896_05890 PF08240 Alcohol dehydrogenase GroES-like domain HF896_05890 PF00698 Acyl transferase domain HF896_05890 PF08659 KR domain HF896_05895 PF00121 Triosephosphate isomerase HF896_05900 PF03840 Preprotein translocase SecG subunit HF896_05910 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HF896_05915 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HF896_05920 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HF896_05925 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HF896_05935 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HF896_05935 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HF896_05935 PF10531 SLBB domain HF896_05940 PF00384 Molybdopterin oxidoreductase HF896_05940 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal HF896_05940 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HF896_05945 PF00146 NADH dehydrogenase HF896_05950 PF12838 4Fe-4S dicluster domain HF896_05955 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HF896_05960 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HF896_05965 PF00361 Proton-conducting membrane transporter HF896_05965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HF896_05970 PF00361 Proton-conducting membrane transporter HF896_05970 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HF896_05975 PF00361 Proton-conducting membrane transporter HF896_05995 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HF896_05995 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HF896_06000 PF08676 MutL C terminal dimerisation domain HF896_06000 PF01119 DNA mismatch repair protein, C-terminal domain HF896_06010 PF09335 SNARE associated Golgi protein HF896_06015 PF01979 Amidohydrolase family HF896_06025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_06025 PF03466 LysR substrate binding domain HF896_06030 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HF896_06030 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HF896_06035 PF00941 FAD binding domain in molybdopterin dehydrogenase HF896_06035 PF03450 CO dehydrogenase flavoprotein C-terminal domain HF896_06045 PF11741 AMIN domain HF896_06045 PF01520 N-acetylmuramoyl-L-alanine amidase HF896_06050 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HF896_06055 PF08331 Domain of unknown function (DUF1730) HF896_06065 PF03401 Tripartite tricarboxylate transporter family receptor HF896_06075 PF02899 Phage integrase, N-terminal SAM-like domain HF896_06075 PF00589 Phage integrase family HF896_06080 PF08447 PAS fold HF896_06080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF896_06085 PF03401 Tripartite tricarboxylate transporter family receptor HF896_06090 PF08668 HDOD domain HF896_06090 PF00563 EAL domain HF896_06095 PF08668 HDOD domain HF896_06095 PF00563 EAL domain HF896_06100 PF04305 Protein of unknown function (DUF455) HF896_06105 PF00132 Bacterial transferase hexapeptide (six repeats) HF896_06110 PF01430 Hsp33 protein HF896_06115 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF896_06120 PF00528 Binding-protein-dependent transport system inner membrane component HF896_06125 PF00528 Binding-protein-dependent transport system inner membrane component HF896_06130 PF00005 ABC transporter HF896_06135 PF04977 Septum formation initiator HF896_06140 PF03952 Enolase, N-terminal domain HF896_06140 PF00113 Enolase, C-terminal TIM barrel domain HF896_06150 PF00793 DAHP synthetase I family HF896_06155 PF00117 Glutamine amidotransferase class-I HF896_06155 PF06418 CTP synthase N-terminus HF896_06160 PF02441 Flavoprotein HF896_06160 PF04127 DNA / pantothenate metabolism flavoprotein HF896_06170 PF00692 dUTPase HF896_06175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HF896_06180 PF08007 Cupin superfamily protein HF896_06195 PF06804 NlpB/DapX lipoprotein HF896_06200 PF00701 Dihydrodipicolinate synthetase family HF896_06215 PF00204 DNA gyrase B HF896_06215 PF01751 Toprim domain HF896_06215 PF00986 DNA gyrase B subunit, carboxyl terminus HF896_06215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_06220 PF00521 DNA gyrase/topoisomerase IV, subunit A HF896_06230 PF00753 Metallo-beta-lactamase superfamily HF896_06230 PF03772 Competence protein HF896_06235 PF00171 Aldehyde dehydrogenase family HF896_06240 PF00581 Rhodanese-like domain HF896_06255 PF02609 Exonuclease VII small subunit HF896_06260 PF00348 Polyprenyl synthetase HF896_06265 PF02779 Transketolase, pyrimidine binding domain HF896_06265 PF02780 Transketolase, C-terminal domain HF896_06265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HF896_06270 PF03480 Bacterial extracellular solute-binding protein, family 7 HF896_06275 PF00271 Helicase conserved C-terminal domain HF896_06275 PF00270 DEAD/DEAH box helicase HF896_06275 PF08494 DEAD/H associated HF896_06280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HF896_06290 PF00459 Inositol monophosphatase family HF896_06295 PF00588 SpoU rRNA Methylase family HF896_06300 PF00132 Bacterial transferase hexapeptide (six repeats) HF896_06310 PF08240 Alcohol dehydrogenase GroES-like domain HF896_06310 PF00107 Zinc-binding dehydrogenase HF896_06315 PF00994 Probable molybdopterin binding domain HF896_06320 PF04751 Protein of unknown function (DUF615) HF896_06325 PF01523 Putative modulator of DNA gyrase HF896_06370 PF00665 Integrase core domain HF896_06375 PF01695 IstB-like ATP binding protein HF896_06390 PF00717 Peptidase S24-like HF896_06390 PF01726 LexA DNA binding domain HF896_06415 PF00206 Lyase HF896_06415 PF10415 Fumarase C C-terminus HF896_06420 PF00027 Cyclic nucleotide-binding domain HF896_06420 PF13545 Crp-like helix-turn-helix domain HF896_06425 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HF896_06430 PF00528 Binding-protein-dependent transport system inner membrane component HF896_06435 PF00571 CBS domain HF896_06435 PF00005 ABC transporter HF896_06440 PF13193 AMP-binding enzyme C-terminal domain HF896_06440 PF00501 AMP-binding enzyme HF896_06440 PF16177 Acetyl-coenzyme A synthetase N-terminus HF896_06445 PF00092 von Willebrand factor type A domain HF896_06445 PF07584 Aerotolerance regulator N-terminal HF896_06450 PF01882 Protein of unknown function DUF58 HF896_06455 PF17863 AAA lid domain HF896_06455 PF07726 ATPase family associated with various cellular activities (AAA) HF896_06460 PF00595 PDZ domain HF896_06465 PF02627 Carboxymuconolactone decarboxylase family HF896_06470 PF01022 Bacterial regulatory protein, arsR family HF896_06480 PF01026 TatD related DNase HF896_06495 PF00437 Type II/IV secretion system protein HF896_06505 PF01970 Tripartite tricarboxylate transporter TctA family HF896_06510 PF00106 short chain dehydrogenase HF896_06520 PF03707 Bacterial signalling protein N terminal repeat HF896_06520 PF00990 Diguanylate cyclase, GGDEF domain HF896_06520 PF00563 EAL domain HF896_06525 PF00892 EamA-like transporter family HF896_06530 PF00107 Zinc-binding dehydrogenase HF896_06530 PF08240 Alcohol dehydrogenase GroES-like domain HF896_06540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_06540 PF03466 LysR substrate binding domain HF896_06545 PF13593 SBF-like CPA transporter family (DUF4137) HF896_06550 PF02690 Na+/Pi-cotransporter HF896_06555 PF00149 Calcineurin-like phosphoesterase HF896_06560 PF00005 ABC transporter HF896_06560 PF12857 TOBE-like domain HF896_06560 PF17850 CysA C-terminal regulatory domain HF896_06565 PF00528 Binding-protein-dependent transport system inner membrane component HF896_06570 PF00528 Binding-protein-dependent transport system inner membrane component HF896_06580 PF00356 Bacterial regulatory proteins, lacI family HF896_06585 PF01252 Signal peptidase (SPase) II HF896_06590 PF00133 tRNA synthetases class I (I, L, M and V) HF896_06590 PF08264 Anticodon-binding domain of tRNA HF896_06590 PF06827 Zinc finger found in FPG and IleRS HF896_06595 PF06574 FAD synthetase HF896_06595 PF01687 Riboflavin kinase HF896_06605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_06605 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_06605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_06610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_06610 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_06610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_06615 PF04337 Protein of unknown function, DUF480 HF896_06620 PF00551 Formyl transferase HF896_06625 PF01029 NusB family HF896_06625 PF01189 16S rRNA methyltransferase RsmB/F HF896_06630 PF00471 Ribosomal protein L33 HF896_06635 PF00830 Ribosomal L28 family HF896_06640 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_06645 PF01580 FtsK/SpoIIIE family HF896_06645 PF09397 Ftsk gamma domain HF896_06645 PF17854 FtsK alpha domain HF896_06645 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HF896_06650 PF03548 Outer membrane lipoprotein carrier protein LolA HF896_06655 PF01040 UbiA prenyltransferase family HF896_06660 PF03167 Uracil DNA glycosylase superfamily HF896_06665 PF00004 ATPase family associated with various cellular activities (AAA) HF896_06665 PF16193 AAA C-terminal domain HF896_06665 PF12002 MgsA AAA+ ATPase C terminal HF896_06670 PF02653 Branched-chain amino acid transport system / permease component HF896_06675 PF11862 Domain of unknown function (DUF3382) HF896_06675 PF02653 Branched-chain amino acid transport system / permease component HF896_06680 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_06680 PF00005 ABC transporter HF896_06685 PF00005 ABC transporter HF896_06700 PF01865 Protein of unknown function DUF47 HF896_06705 PF01384 Phosphate transporter family HF896_06720 PF00886 Ribosomal protein S16 HF896_06725 PF01782 RimM N-terminal domain HF896_06725 PF05239 PRC-barrel domain HF896_06730 PF01746 tRNA (Guanine-1)-methyltransferase HF896_06735 PF01245 Ribosomal protein L19 HF896_06740 PF00293 NUDIX domain HF896_06745 PF17113 Regulatory signalling modulator protein AmpE HF896_06745 PF03186 CobD/Cbib protein HF896_06750 PF00155 Aminotransferase class I and II HF896_06755 PF01740 STAS domain HF896_06755 PF00916 Sulfate permease family HF896_06760 PF03193 RsgA GTPase HF896_06765 PF01329 Pterin 4 alpha carbinolamine dehydratase HF896_06770 PF01435 Peptidase family M48 HF896_06775 PF00929 Exonuclease HF896_06780 PF13458 Periplasmic binding protein HF896_06785 PF00270 DEAD/DEAH box helicase HF896_06785 PF00271 Helicase conserved C-terminal domain HF896_06790 PF08448 PAS fold HF896_06790 PF00563 EAL domain HF896_06790 PF00990 Diguanylate cyclase, GGDEF domain HF896_06790 PF05231 MASE1 HF896_06790 PF08447 PAS fold HF896_06790 PF13426 PAS domain HF896_06795 PF07690 Major Facilitator Superfamily HF896_06830 PF00005 ABC transporter HF896_06840 PF00593 TonB dependent receptor HF896_06840 PF07715 TonB-dependent Receptor Plug Domain HF896_06845 PF02514 CobN/Magnesium Chelatase HF896_06875 PF00478 IMP dehydrogenase / GMP reductase domain HF896_06880 PF13361 UvrD-like helicase C-terminal domain HF896_06880 PF00580 UvrD/REP helicase N-terminal domain HF896_06890 PF00563 EAL domain HF896_06890 PF01590 GAF domain HF896_06890 PF00360 Phytochrome region HF896_06890 PF00990 Diguanylate cyclase, GGDEF domain HF896_06900 PF01636 Phosphotransferase enzyme family HF896_06915 PF01612 3'-5' exonuclease HF896_06915 PF00476 DNA polymerase family A HF896_06915 PF01367 5'-3' exonuclease, C-terminal SAM fold HF896_06915 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HF896_06920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_06920 PF03466 LysR substrate binding domain HF896_06930 PF03401 Tripartite tricarboxylate transporter family receptor HF896_06940 PF03466 LysR substrate binding domain HF896_06940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_06945 PF03401 Tripartite tricarboxylate transporter family receptor HF896_06950 PF02515 CoA-transferase family III HF896_06955 PF00378 Enoyl-CoA hydratase/isomerase HF896_06960 PF01738 Dienelactone hydrolase family HF896_06970 PF00072 Response regulator receiver domain HF896_06970 PF04397 LytTr DNA-binding domain HF896_06980 PF01232 Mannitol dehydrogenase Rossmann domain HF896_06980 PF08125 Mannitol dehydrogenase C-terminal domain HF896_06990 PF00271 Helicase conserved C-terminal domain HF896_06990 PF03461 TRCF domain HF896_06990 PF02559 CarD-like/TRCF domain HF896_06990 PF00270 DEAD/DEAH box helicase HF896_06990 PF17757 UvrB interaction domain HF896_06995 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HF896_06995 PF02542 YgbB family HF896_07000 PF02542 YgbB family HF896_07005 PF00672 HAMP domain HF896_07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_07005 PF00512 His Kinase A (phospho-acceptor) domain HF896_07010 PF00072 Response regulator receiver domain HF896_07010 PF00486 Transcriptional regulatory protein, C terminal HF896_07020 PF00106 short chain dehydrogenase HF896_07030 PF02824 TGS domain HF896_07030 PF04607 Region found in RelA / SpoT proteins HF896_07030 PF13291 ACT domain HF896_07045 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HF896_07050 PF05233 PHB accumulation regulatory domain HF896_07050 PF07879 PHB/PHA accumulation regulator DNA-binding domain HF896_07055 PF00919 Uncharacterized protein family UPF0004 HF896_07055 PF18693 TRAM domain HF896_07055 PF04055 Radical SAM superfamily HF896_07060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HF896_07070 PF03466 LysR substrate binding domain HF896_07070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_07075 PF00682 HMGL-like HF896_07080 PF02515 CoA-transferase family III HF896_07085 PF03401 Tripartite tricarboxylate transporter family receptor HF896_07090 PF08546 Ketopantoate reductase PanE/ApbA C terminal HF896_07090 PF02558 Ketopantoate reductase PanE/ApbA HF896_07100 PF04539 Sigma-70 region 3 HF896_07100 PF04542 Sigma-70 region 2 HF896_07100 PF00140 Sigma-70 factor, region 1.2 HF896_07100 PF03979 Sigma-70 factor, region 1.1 HF896_07100 PF04546 Sigma-70, non-essential region HF896_07100 PF04545 Sigma-70, region 4 HF896_07105 PF01807 CHC2 zinc finger HF896_07105 PF08275 DNA primase catalytic core, N-terminal domain HF896_07105 PF08278 DNA primase DnaG DnaB-binding HF896_07105 PF10410 DnaB-helicase binding domain of primase HF896_07110 PF13193 AMP-binding enzyme C-terminal domain HF896_07110 PF00501 AMP-binding enzyme HF896_07115 PF13091 PLD-like domain HF896_07120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_07120 PF03459 TOBE domain HF896_07125 PF00528 Binding-protein-dependent transport system inner membrane component HF896_07130 PF00005 ABC transporter HF896_07135 PF12849 PBP superfamily domain HF896_07145 PF03459 TOBE domain HF896_07145 PF00005 ABC transporter HF896_07150 PF00528 Binding-protein-dependent transport system inner membrane component HF896_07160 PF03459 TOBE domain HF896_07160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_07165 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_07165 PF00005 ABC transporter HF896_07170 PF00005 ABC transporter HF896_07185 PF02653 Branched-chain amino acid transport system / permease component HF896_07210 PF00011 Hsp20/alpha crystallin family HF896_07215 PF00005 ABC transporter HF896_07225 PF07690 Major Facilitator Superfamily HF896_07230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HF896_07230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HF896_07235 PF01230 HIT domain HF896_07240 PF13609 Gram-negative porin HF896_07250 PF08448 PAS fold HF896_07250 PF08447 PAS fold HF896_07250 PF00990 Diguanylate cyclase, GGDEF domain HF896_07250 PF05231 MASE1 HF896_07250 PF00563 EAL domain HF896_07250 PF13426 PAS domain HF896_07255 PF00005 ABC transporter HF896_07270 PF02608 ABC transporter substrate-binding protein PnrA-like HF896_07275 PF02608 ABC transporter substrate-binding protein PnrA-like HF896_07280 PF01266 FAD dependent oxidoreductase HF896_07285 PF00005 ABC transporter HF896_07295 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF896_07300 PF01614 Bacterial transcriptional regulator HF896_07300 PF09339 IclR helix-turn-helix domain HF896_07310 PF00962 Adenosine/AMP deaminase HF896_07320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF896_07325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF896_07325 PF00005 ABC transporter HF896_07330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF896_07330 PF00005 ABC transporter HF896_07335 PF00528 Binding-protein-dependent transport system inner membrane component HF896_07335 PF12911 N-terminal TM domain of oligopeptide transport permease C HF896_07340 PF00528 Binding-protein-dependent transport system inner membrane component HF896_07345 PF03466 LysR substrate binding domain HF896_07345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_07350 PF04199 Putative cyclase HF896_07355 PF03692 Putative zinc- or iron-chelating domain HF896_07365 PF02421 Ferrous iron transport protein B HF896_07365 PF07670 Nucleoside recognition HF896_07365 PF07664 Ferrous iron transport protein B C terminus HF896_07375 PF03692 Putative zinc- or iron-chelating domain HF896_07390 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HF896_07390 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HF896_07395 PF00202 Aminotransferase class-III HF896_07415 PF01649 Ribosomal protein S20 HF896_07420 PF03023 Lipid II flippase MurJ HF896_07425 PF13369 Transglutaminase-like superfamily HF896_07430 PF00582 Universal stress protein family HF896_07440 PF00586 AIR synthase related protein, N-terminal domain HF896_07440 PF02769 AIR synthase related protein, C-terminal domain HF896_07450 PF00308 Bacterial dnaA protein HF896_07460 PF01743 Poly A polymerase head domain HF896_07460 PF12627 Probable RNA and SrmB- binding site of polymerase A HF896_07460 PF12626 Polymerase A arginine-rich C-terminus HF896_07465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HF896_07470 PF00535 Glycosyl transferase family 2 HF896_07475 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HF896_07490 PF03401 Tripartite tricarboxylate transporter family receptor HF896_07495 PF03401 Tripartite tricarboxylate transporter family receptor HF896_07505 PF03466 LysR substrate binding domain HF896_07505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_07510 PF00291 Pyridoxal-phosphate dependent enzyme HF896_07515 PF00175 Oxidoreductase NAD-binding domain HF896_07515 PF00111 2Fe-2S iron-sulfur cluster binding domain HF896_07515 PF00970 Oxidoreductase FAD-binding domain HF896_07535 PF03401 Tripartite tricarboxylate transporter family receptor HF896_07540 PF02515 CoA-transferase family III HF896_07545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_07545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_07545 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_07550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_07550 PF03466 LysR substrate binding domain HF896_07590 PF00271 Helicase conserved C-terminal domain HF896_07590 PF00270 DEAD/DEAH box helicase HF896_07595 PF12848 ABC transporter HF896_07595 PF00005 ABC transporter HF896_07605 PF03576 Peptidase family S58 HF896_07630 PF00403 Heavy-metal-associated domain HF896_07635 PF13411 MerR HTH family regulatory protein HF896_07660 PF03853 YjeF-related protein N-terminus HF896_07660 PF01256 Carbohydrate kinase HF896_07665 PF01266 FAD dependent oxidoreductase HF896_07670 PF01425 Amidase HF896_07675 PF00318 Ribosomal protein S2 HF896_07680 PF00889 Elongation factor TS HF896_07685 PF00696 Amino acid kinase family HF896_07690 PF01765 Ribosome recycling factor HF896_07695 PF01255 Putative undecaprenyl diphosphate synthase HF896_07705 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HF896_07705 PF13288 DXP reductoisomerase C-terminal domain HF896_07705 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HF896_07710 PF17820 PDZ domain HF896_07710 PF02163 Peptidase family M50 HF896_07715 PF01103 Surface antigen HF896_07715 PF07244 Surface antigen variable number repeat HF896_07725 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HF896_07725 PF14602 Hexapeptide repeat of succinyl-transferase HF896_07725 PF00132 Bacterial transferase hexapeptide (six repeats) HF896_07730 PF07977 FabA-like domain HF896_07735 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HF896_07735 PF00132 Bacterial transferase hexapeptide (six repeats) HF896_07740 PF02684 Lipid-A-disaccharide synthetase HF896_07745 PF01351 Ribonuclease HII HF896_07750 PF08032 RNA 2'-O ribose methyltransferase substrate binding HF896_07750 PF00588 SpoU rRNA Methylase family HF896_07760 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HF896_07765 PF11940 Domain of unknown function (DUF3458) Ig-like fold HF896_07765 PF01433 Peptidase family M1 domain HF896_07765 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HF896_07775 PF01113 Dihydrodipicolinate reductase, N-terminus HF896_07775 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain HF896_07790 PF00528 Binding-protein-dependent transport system inner membrane component HF896_07795 PF08402 TOBE domain HF896_07795 PF00005 ABC transporter HF896_07800 PF00248 Aldo/keto reductase family HF896_07805 PF04073 Aminoacyl-tRNA editing domain HF896_07810 PF02660 Glycerol-3-phosphate acyltransferase HF896_07825 PF04461 Protein of unknown function (DUF520) HF896_07830 PF01565 FAD binding domain HF896_07830 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HF896_07840 PF02592 Putative vitamin uptake transporter HF896_07845 PF06508 Queuosine biosynthesis protein QueC HF896_07850 PF05378 Hydantoinase/oxoprolinase N-terminal region HF896_07850 PF01968 Hydantoinase/oxoprolinase HF896_07855 PF02538 Hydantoinase B/oxoprolinase HF896_07860 PF08882 Acetone carboxylase gamma subunit HF896_07865 PF02954 Bacterial regulatory protein, Fis family HF896_07865 PF00158 Sigma-54 interaction domain HF896_07865 PF01590 GAF domain HF896_07870 PF00764 Arginosuccinate synthase HF896_07875 PF06865 Pyrimidine/purine nucleoside phosphorylase HF896_07885 PF03960 ArsC family HF896_07890 PF08245 Mur ligase middle domain HF896_07890 PF02875 Mur ligase family, glutamate ligase domain HF896_07900 PF02674 Colicin V production protein HF896_07905 PF00156 Phosphoribosyl transferase domain HF896_07910 PF01053 Cys/Met metabolism PLP-dependent enzyme HF896_07915 PF00749 tRNA synthetases class I (E and Q), catalytic domain HF896_07980 PF00581 Rhodanese-like domain HF896_07985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_07985 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_07985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_08000 PF02371 Transposase IS116/IS110/IS902 family HF896_08000 PF01548 Transposase HF896_08005 PF03601 Conserved hypothetical protein 698 HF896_08010 PF13183 4Fe-4S dicluster domain HF896_08010 PF13085 2Fe-2S iron-sulfur cluster binding domain HF896_08025 PF00890 FAD binding domain HF896_08025 PF02910 Fumarate reductase flavoprotein C-term HF896_08030 PF05683 Fumarase C-terminus HF896_08030 PF05681 Fumarate hydratase (Fumerase) HF896_08045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_08045 PF03466 LysR substrate binding domain HF896_08050 PF03401 Tripartite tricarboxylate transporter family receptor HF896_08060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_08060 PF03466 LysR substrate binding domain HF896_08065 PF03601 Conserved hypothetical protein 698 HF896_08070 PF00171 Aldehyde dehydrogenase family HF896_08075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_08075 PF03466 LysR substrate binding domain HF896_08080 PF03401 Tripartite tricarboxylate transporter family receptor HF896_08085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF896_08085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HF896_08085 PF00205 Thiamine pyrophosphate enzyme, central domain HF896_08090 PF00171 Aldehyde dehydrogenase family HF896_08095 PF03466 LysR substrate binding domain HF896_08095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_08105 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF896_08110 PF00528 Binding-protein-dependent transport system inner membrane component HF896_08115 PF00528 Binding-protein-dependent transport system inner membrane component HF896_08120 PF01063 Amino-transferase class IV HF896_08125 PF01266 FAD dependent oxidoreductase HF896_08130 PF00589 Phage integrase family HF896_08130 PF14659 Phage integrase, N-terminal SAM-like domain HF896_08130 PF13356 Arm DNA-binding domain HF896_08165 PF00106 short chain dehydrogenase HF896_08175 PF09361 Phasin protein HF896_08185 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HF896_08185 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HF896_08195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HF896_08195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HF896_08200 PF02646 RmuC family HF896_08215 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HF896_08230 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HF896_08240 PF00361 Proton-conducting membrane transporter HF896_08245 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HF896_08250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HF896_08250 PF13244 Domain of unknown function (DUF4040) HF896_08250 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HF896_08250 PF00361 Proton-conducting membrane transporter HF896_08260 PF18073 Rubredoxin metal binding domain HF896_08280 PF04279 Intracellular septation protein A HF896_08285 PF01641 SelR domain HF896_08290 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HF896_08295 PF00501 AMP-binding enzyme HF896_08295 PF13193 AMP-binding enzyme C-terminal domain HF896_08305 PF02653 Branched-chain amino acid transport system / permease component HF896_08315 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_08315 PF00005 ABC transporter HF896_08320 PF00005 ABC transporter HF896_08325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HF896_08325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HF896_08325 PF00378 Enoyl-CoA hydratase/isomerase HF896_08330 PF00108 Thiolase, N-terminal domain HF896_08330 PF02803 Thiolase, C-terminal domain HF896_08335 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF896_08340 PF00528 Binding-protein-dependent transport system inner membrane component HF896_08345 PF00528 Binding-protein-dependent transport system inner membrane component HF896_08350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_08350 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_08350 PF12806 Acetyl-CoA dehydrogenase C-terminal like HF896_08350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_08375 PF02321 Outer membrane efflux protein HF896_08390 PF00440 Bacterial regulatory proteins, tetR family HF896_08390 PF17922 Tetracyclin repressor-like, C-terminal domain HF896_08395 PF01625 Peptide methionine sulfoxide reductase HF896_08405 PF00593 TonB dependent receptor HF896_08405 PF07715 TonB-dependent Receptor Plug Domain HF896_08425 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HF896_08425 PF01243 Pyridoxamine 5'-phosphate oxidase HF896_08450 PF17674 HHH domain HF896_08450 PF00575 S1 RNA binding domain HF896_08450 PF09371 Tex-like protein N-terminal domain HF896_08450 PF16921 Tex protein YqgF-like domain HF896_08455 PF03401 Tripartite tricarboxylate transporter family receptor HF896_08470 PF03401 Tripartite tricarboxylate transporter family receptor HF896_08480 PF00501 AMP-binding enzyme HF896_08480 PF13193 AMP-binding enzyme C-terminal domain HF896_08485 PF03401 Tripartite tricarboxylate transporter family receptor HF896_08490 PF00356 Bacterial regulatory proteins, lacI family HF896_08500 PF02515 CoA-transferase family III HF896_08505 PF03401 Tripartite tricarboxylate transporter family receptor HF896_08510 PF03401 Tripartite tricarboxylate transporter family receptor HF896_08515 PF04909 Amidohydrolase HF896_08530 PF01557 Fumarylacetoacetate (FAA) hydrolase family HF896_08535 PF07859 alpha/beta hydrolase fold HF896_08550 PF00196 Bacterial regulatory proteins, luxR family HF896_08550 PF00072 Response regulator receiver domain HF896_08555 PF00512 His Kinase A (phospho-acceptor) domain HF896_08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_08555 PF08448 PAS fold HF896_08555 PF13426 PAS domain HF896_08555 PF00072 Response regulator receiver domain HF896_08560 PF07690 Major Facilitator Superfamily HF896_08565 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HF896_08575 PF02618 YceG-like family HF896_08580 PF02223 Thymidylate kinase HF896_08585 PF09115 DNA polymerase III, delta subunit, C terminal HF896_08595 PF01026 TatD related DNase HF896_08615 PF07729 FCD domain HF896_08615 PF00392 Bacterial regulatory proteins, gntR family HF896_08620 PF07690 Major Facilitator Superfamily HF896_08625 PF03746 LamB/YcsF family HF896_08630 PF07286 Protein of unknown function (DUF1445) HF896_08635 PF02682 Carboxyltransferase domain, subdomain C and D HF896_08640 PF00364 Biotin-requiring enzyme HF896_08640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HF896_08640 PF00289 Biotin carboxylase, N-terminal domain HF896_08640 PF02785 Biotin carboxylase C-terminal domain HF896_08645 PF00664 ABC transporter transmembrane region HF896_08645 PF00005 ABC transporter HF896_08650 PF04052 TolB amino-terminal domain HF896_08650 PF07676 WD40-like Beta Propeller Repeat HF896_08655 PF00691 OmpA family HF896_08660 PF13174 Tetratricopeptide repeat HF896_08660 PF16331 TolA binding protein trimerisation HF896_08665 PF00899 ThiF family HF896_08685 PF01476 LysM domain HF896_08685 PF01464 Transglycosylase SLT domain HF896_08690 PF16123 Hydroxyacylglutathione hydrolase C-terminus HF896_08690 PF00753 Metallo-beta-lactamase superfamily HF896_08695 PF08241 Methyltransferase domain HF896_08700 PF00075 RNase H HF896_08705 PF00155 Aminotransferase class I and II HF896_08710 PF03737 Aldolase/RraA HF896_08715 PF03737 Aldolase/RraA HF896_08715 PF00180 Isocitrate/isopropylmalate dehydrogenase HF896_08720 PF03466 LysR substrate binding domain HF896_08720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_08725 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF896_08735 PF03401 Tripartite tricarboxylate transporter family receptor HF896_08750 PF00994 Probable molybdopterin binding domain HF896_08750 PF03454 MoeA C-terminal region (domain IV) HF896_08750 PF03453 MoeA N-terminal region (domain I and II) HF896_08760 PF12804 MobA-like NTP transferase domain HF896_08765 PF06463 Molybdenum Cofactor Synthesis C HF896_08765 PF04055 Radical SAM superfamily HF896_08780 PF00171 Aldehyde dehydrogenase family HF896_08785 PF03030 Inorganic H+ pyrophosphatase HF896_08790 PF00719 Inorganic pyrophosphatase HF896_08795 PF01584 CheW-like domain HF896_08800 PF00672 HAMP domain HF896_08800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF896_08800 PF02203 Tar ligand binding domain homologue HF896_08815 PF00795 Carbon-nitrogen hydrolase HF896_08815 PF02540 NAD synthase HF896_08820 PF00543 Nitrogen regulatory protein P-II HF896_08825 PF03641 Possible lysine decarboxylase HF896_08830 PF01219 Prokaryotic diacylglycerol kinase HF896_08850 PF04542 Sigma-70 region 2 HF896_08850 PF08281 Sigma-70, region 4 HF896_08855 PF00205 Thiamine pyrophosphate enzyme, central domain HF896_08855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF896_08855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HF896_08860 PF10369 Small subunit of acetolactate synthase HF896_08865 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HF896_08865 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HF896_08870 PF01066 CDP-alcohol phosphatidyltransferase HF896_08875 PF13417 Glutathione S-transferase, N-terminal domain HF896_08885 PF07690 Major Facilitator Superfamily HF896_08895 PF03466 LysR substrate binding domain HF896_08895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_08900 PF08502 LeuA allosteric (dimerisation) domain HF896_08900 PF00682 HMGL-like HF896_08905 PF08502 LeuA allosteric (dimerisation) domain HF896_08905 PF00682 HMGL-like HF896_08910 PF00768 D-alanyl-D-alanine carboxypeptidase HF896_08915 PF09339 IclR helix-turn-helix domain HF896_08915 PF01614 Bacterial transcriptional regulator HF896_08920 PF00474 Sodium:solute symporter family HF896_08925 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HF896_08925 PF00171 Aldehyde dehydrogenase family HF896_08925 PF14850 DNA-binding domain of Proline dehydrogenase HF896_08925 PF01619 Proline dehydrogenase HF896_08930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_08930 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_08930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_08940 PF13545 Crp-like helix-turn-helix domain HF896_08940 PF00027 Cyclic nucleotide-binding domain HF896_08945 PF00378 Enoyl-CoA hydratase/isomerase HF896_08950 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HF896_08950 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HF896_08950 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HF896_08960 PF02581 Thiamine monophosphate synthase HF896_08965 PF05690 Thiazole biosynthesis protein ThiG HF896_08975 PF01266 FAD dependent oxidoreductase HF896_08980 PF08543 Phosphomethylpyrimidine kinase HF896_08995 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_09000 PF11953 Domain of unknown function (DUF3470) HF896_09000 PF00037 4Fe-4S binding domain HF896_09005 PF00009 Elongation factor Tu GTP binding domain HF896_09010 PF01507 Phosphoadenosine phosphosulfate reductase family HF896_09015 PF01507 Phosphoadenosine phosphosulfate reductase family HF896_09030 PF01925 Sulfite exporter TauE/SafE HF896_09035 PF01266 FAD dependent oxidoreductase HF896_09035 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HF896_09040 PF03458 UPF0126 domain HF896_09045 PF04362 Bacterial Fe(2+) trafficking HF896_09065 PF13193 AMP-binding enzyme C-terminal domain HF896_09065 PF00501 AMP-binding enzyme HF896_09070 PF00108 Thiolase, N-terminal domain HF896_09070 PF02803 Thiolase, C-terminal domain HF896_09085 PF02653 Branched-chain amino acid transport system / permease component HF896_09095 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_09095 PF00005 ABC transporter HF896_09100 PF00005 ABC transporter HF896_09110 PF13193 AMP-binding enzyme C-terminal domain HF896_09110 PF00501 AMP-binding enzyme HF896_09135 PF01464 Transglycosylase SLT domain HF896_09135 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF896_09160 PF00580 UvrD/REP helicase N-terminal domain HF896_09160 PF12462 DNA helicase IV / RNA helicase N terminal HF896_09160 PF13361 UvrD-like helicase C-terminal domain HF896_09170 PF01695 IstB-like ATP binding protein HF896_09175 PF00665 Integrase core domain HF896_09185 PF00580 UvrD/REP helicase N-terminal domain HF896_09185 PF13361 UvrD-like helicase C-terminal domain HF896_09185 PF12462 DNA helicase IV / RNA helicase N terminal HF896_09195 PF00872 Transposase, Mutator family HF896_09230 PF02190 ATP-dependent protease La (LON) substrate-binding domain HF896_09230 PF00004 ATPase family associated with various cellular activities (AAA) HF896_09230 PF05362 Lon protease (S16) C-terminal proteolytic domain HF896_09250 PF09588 YqaJ-like viral recombinase domain HF896_09285 PF13148 Protein of unknown function (DUF3987) HF896_09310 PF00239 Resolvase, N terminal domain HF896_09310 PF02796 Helix-turn-helix domain of resolvase HF896_09345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HF896_09345 PF00205 Thiamine pyrophosphate enzyme, central domain HF896_09345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF896_09350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_09350 PF03466 LysR substrate binding domain HF896_09355 PF01145 SPFH domain / Band 7 family HF896_09365 PF01276 Orn/Lys/Arg decarboxylase, major domain HF896_09365 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HF896_09365 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HF896_09370 PF03741 Integral membrane protein TerC family HF896_09375 PF01068 ATP dependent DNA ligase domain HF896_09375 PF14743 DNA ligase OB-like domain HF896_09380 PF04325 Protein of unknown function (DUF465) HF896_09385 PF00892 EamA-like transporter family HF896_09395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF896_09405 PF00528 Binding-protein-dependent transport system inner membrane component HF896_09410 PF12911 N-terminal TM domain of oligopeptide transport permease C HF896_09410 PF00528 Binding-protein-dependent transport system inner membrane component HF896_09415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF896_09415 PF00005 ABC transporter HF896_09420 PF00582 Universal stress protein family HF896_09425 PF03466 LysR substrate binding domain HF896_09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_09440 PF03401 Tripartite tricarboxylate transporter family receptor HF896_09445 PF01594 AI-2E family transporter HF896_09450 PF00676 Dehydrogenase E1 component HF896_09450 PF16870 2-oxoglutarate dehydrogenase C-terminal HF896_09450 PF02779 Transketolase, pyrimidine binding domain HF896_09450 PF16078 2-oxoglutarate dehydrogenase N-terminus HF896_09455 PF00364 Biotin-requiring enzyme HF896_09455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HF896_09455 PF02817 e3 binding domain HF896_09460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HF896_09460 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_09465 PF03969 AFG1-like ATPase HF896_09480 PF13307 Helicase C-terminal domain HF896_09480 PF04851 Type III restriction enzyme, res subunit HF896_09485 PF13525 Outer membrane lipoprotein HF896_09490 PF02811 PHP domain HF896_09490 PF07733 Bacterial DNA polymerase III alpha NTPase domain HF896_09490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HF896_09490 PF14579 Helix-hairpin-helix motif HF896_09490 PF01336 OB-fold nucleic acid binding domain HF896_09495 PF02617 ATP-dependent Clp protease adaptor protein ClpS HF896_09500 PF07724 AAA domain (Cdc48 subfamily) HF896_09500 PF10431 C-terminal, D2-small domain, of ClpB protein HF896_09500 PF02861 Clp amino terminal domain, pathogenicity island component HF896_09500 PF17871 AAA lid domain HF896_09500 PF00004 ATPase family associated with various cellular activities (AAA) HF896_09505 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HF896_09505 PF00356 Bacterial regulatory proteins, lacI family HF896_09515 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HF896_09520 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HF896_09525 PF03480 Bacterial extracellular solute-binding protein, family 7 HF896_09530 PF00920 Dehydratase family HF896_09535 PF01081 KDPG and KHG aldolase HF896_09540 PF03466 LysR substrate binding domain HF896_09540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_09545 PF13378 Enolase C-terminal domain-like HF896_09545 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HF896_09550 PF00775 Dioxygenase HF896_09550 PF04444 Catechol dioxygenase N terminus HF896_09555 PF00106 short chain dehydrogenase HF896_09560 PF12146 Serine aminopeptidase, S33 HF896_09565 PF02426 Muconolactone delta-isomerase HF896_09570 PF03401 Tripartite tricarboxylate transporter family receptor HF896_09575 PF07690 Major Facilitator Superfamily HF896_09580 PF01926 50S ribosome-binding GTPase HF896_09585 PF01926 50S ribosome-binding GTPase HF896_09590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HF896_09610 PF00005 ABC transporter HF896_09620 PF02632 BioY family HF896_09625 PF00501 AMP-binding enzyme HF896_09625 PF13193 AMP-binding enzyme C-terminal domain HF896_09630 PF00108 Thiolase, N-terminal domain HF896_09630 PF02803 Thiolase, C-terminal domain HF896_09635 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HF896_09635 PF00271 Helicase conserved C-terminal domain HF896_09635 PF00270 DEAD/DEAH box helicase HF896_09635 PF11898 Domain of unknown function (DUF3418) HF896_09635 PF04408 Helicase associated domain (HA2) HF896_09645 PF01726 LexA DNA binding domain HF896_09645 PF00717 Peptidase S24-like HF896_09650 PF00710 Asparaginase, N-terminal HF896_09650 PF17763 Glutaminase/Asparaginase C-terminal domain HF896_09655 PF05191 Adenylate kinase, active site lid HF896_09660 PF02348 Cytidylyltransferase HF896_09665 PF03966 Trm112p-like protein HF896_09670 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HF896_09675 PF02472 Biopolymer transport protein ExbD/TolR HF896_09680 PF01618 MotA/TolQ/ExbB proton channel family HF896_09685 PF13742 OB-fold nucleic acid binding domain HF896_09685 PF02601 Exonuclease VII, large subunit HF896_09690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HF896_09690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HF896_09695 PF03971 Monomeric isocitrate dehydrogenase HF896_09710 PF00180 Isocitrate/isopropylmalate dehydrogenase HF896_09735 PF04304 Protein of unknown function (DUF454) HF896_09740 PF01327 Polypeptide deformylase HF896_09745 PF00860 Permease family HF896_09750 PF08335 GlnD PII-uridylyltransferase HF896_09750 PF01966 HD domain HF896_09750 PF01909 Nucleotidyltransferase domain HF896_09755 PF00557 Metallopeptidase family M24 HF896_09760 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HF896_09760 PF02769 AIR synthase related protein, C-terminal domain HF896_09760 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HF896_09765 PF05661 Protein of unknown function (DUF808) HF896_09770 PF03922 OmpW family HF896_09775 PF10017 Histidine-specific methyltransferase, SAM-dependent HF896_09780 PF03781 Sulfatase-modifying factor enzyme 1 HF896_09780 PF12867 DinB superfamily HF896_09785 PF01053 Cys/Met metabolism PLP-dependent enzyme HF896_09790 PF01136 Peptidase family U32 HF896_09790 PF12392 Collagenase HF896_09800 PF14437 MafB19-like deaminase HF896_09805 PF17676 LD-carboxypeptidase C-terminal domain HF896_09805 PF02016 LD-carboxypeptidase N-terminal domain HF896_09810 PF16701 Adenylate cyclase regulatory domain HF896_09810 PF00211 Adenylate and Guanylate cyclase catalytic domain HF896_09820 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HF896_09820 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HF896_09825 PF02805 Metal binding domain of Ada HF896_09825 PF12833 Helix-turn-helix domain HF896_09835 PF00294 pfkB family carbohydrate kinase HF896_09840 PF04962 KduI/IolB family HF896_09845 PF03401 Tripartite tricarboxylate transporter family receptor HF896_09850 PF03401 Tripartite tricarboxylate transporter family receptor HF896_09855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HF896_09855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HF896_09855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HF896_09855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HF896_09860 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HF896_09860 PF00534 Glycosyl transferases group 1 HF896_09865 PF13380 CoA binding domain HF896_09865 PF13607 Succinyl-CoA ligase like flavodoxin domain HF896_09865 PF00583 Acetyltransferase (GNAT) family HF896_09870 PF00849 RNA pseudouridylate synthase HF896_09875 PF07729 FCD domain HF896_09875 PF00392 Bacterial regulatory proteins, gntR family HF896_09880 PF02615 Malate/L-lactate dehydrogenase HF896_09885 PF03480 Bacterial extracellular solute-binding protein, family 7 HF896_09890 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HF896_09900 PF00701 Dihydrodipicolinate synthetase family HF896_09905 PF02272 DHHA1 domain HF896_09905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HF896_09905 PF01411 tRNA synthetases class II (A) HF896_09910 PF00990 Diguanylate cyclase, GGDEF domain HF896_09910 PF17158 Membrane-associated sensor, integral membrane domain HF896_09915 PF02390 Putative methyltransferase HF896_09920 PF00749 tRNA synthetases class I (E and Q), catalytic domain HF896_09925 PF01593 Flavin containing amine oxidoreductase HF896_09930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_09930 PF03466 LysR substrate binding domain HF896_09935 PF17954 Quercetinase C-terminal cupin domain HF896_09935 PF02678 Pirin HF896_09940 PF04377 Arginine-tRNA-protein transferase, C terminus HF896_09940 PF04376 Arginine-tRNA-protein transferase, N terminus HF896_09945 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HF896_09950 PF00171 Aldehyde dehydrogenase family HF896_09955 PF13378 Enolase C-terminal domain-like HF896_09960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HF896_09960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HF896_09965 PF03401 Tripartite tricarboxylate transporter family receptor HF896_09970 PF00701 Dihydrodipicolinate synthetase family HF896_09975 PF03401 Tripartite tricarboxylate transporter family receptor HF896_09985 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HF896_09985 PF13378 Enolase C-terminal domain-like HF896_09990 PF03401 Tripartite tricarboxylate transporter family receptor HF896_09995 PF08666 SAF domain HF896_09995 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HF896_10005 PF00291 Pyridoxal-phosphate dependent enzyme HF896_10025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HF896_10025 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HF896_10035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_10035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_10035 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_10045 PF00171 Aldehyde dehydrogenase family HF896_10050 PF03466 LysR substrate binding domain HF896_10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_10055 PF07995 Glucose / Sorbosone dehydrogenase HF896_10065 PF00501 AMP-binding enzyme HF896_10065 PF16177 Acetyl-coenzyme A synthetase N-terminus HF896_10065 PF13193 AMP-binding enzyme C-terminal domain HF896_10070 PF10609 NUBPL iron-transfer P-loop NTPase HF896_10075 PF00990 Diguanylate cyclase, GGDEF domain HF896_10075 PF05230 MASE2 domain HF896_10080 PF01740 STAS domain HF896_10080 PF00916 Sulfate permease family HF896_10090 PF01053 Cys/Met metabolism PLP-dependent enzyme HF896_10100 PF13472 GDSL-like Lipase/Acylhydrolase family HF896_10105 PF00005 ABC transporter HF896_10110 PF00375 Sodium:dicarboxylate symporter family HF896_10115 PF00588 SpoU rRNA Methylase family HF896_10115 PF08032 RNA 2'-O ribose methyltransferase substrate binding HF896_10150 PF07237 Protein of unknown function (DUF1428) HF896_10160 PF02146 Sir2 family HF896_10170 PF02417 Chromate transporter HF896_10175 PF00893 Small Multidrug Resistance protein HF896_10185 PF07690 Major Facilitator Superfamily HF896_10195 PF01027 Inhibitor of apoptosis-promoting Bax1 HF896_10200 PF03928 Haem-degrading HF896_10210 PF02472 Biopolymer transport protein ExbD/TolR HF896_10215 PF01618 MotA/TolQ/ExbB proton channel family HF896_10240 PF00463 Isocitrate lyase family HF896_10250 PF02824 TGS domain HF896_10250 PF03129 Anticodon binding domain HF896_10250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HF896_10250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HF896_10255 PF05198 Translation initiation factor IF-3, N-terminal domain HF896_10255 PF00707 Translation initiation factor IF-3, C-terminal domain HF896_10260 PF01632 Ribosomal protein L35 HF896_10265 PF00453 Ribosomal protein L20 HF896_10270 PF01409 tRNA synthetases class II core domain (F) HF896_10270 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HF896_10275 PF03484 tRNA synthetase B5 domain HF896_10275 PF01588 Putative tRNA binding domain HF896_10275 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HF896_10275 PF03483 B3/4 domain HF896_10275 PF03147 Ferredoxin-fold anticodon binding domain HF896_10280 PF00216 Bacterial DNA-binding protein HF896_10285 PF13411 MerR HTH family regulatory protein HF896_10295 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HF896_10295 PF00117 Glutamine amidotransferase class-I HF896_10300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HF896_10300 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HF896_10300 PF02142 MGS-like domain HF896_10305 PF03449 Transcription elongation factor, N-terminal HF896_10305 PF01272 Transcription elongation factor, GreA/GreB, C-term HF896_10320 PF01985 CRS1 / YhbY (CRM) domain HF896_10325 PF01728 FtsJ-like methyltransferase HF896_10330 PF01434 Peptidase family M41 HF896_10330 PF00004 ATPase family associated with various cellular activities (AAA) HF896_10330 PF17862 AAA+ lid domain HF896_10330 PF06480 FtsH Extracellular HF896_10335 PF00809 Pterin binding enzyme HF896_10340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HF896_10340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HF896_10340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HF896_10340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HF896_10345 PF03707 Bacterial signalling protein N terminal repeat HF896_10345 PF00990 Diguanylate cyclase, GGDEF domain HF896_10345 PF00563 EAL domain HF896_10355 PF17941 Polyphosphate kinase C-terminal domain 1 HF896_10355 PF02503 Polyphosphate kinase middle domain HF896_10355 PF13089 Polyphosphate kinase N-terminal domain HF896_10355 PF13090 Polyphosphate kinase C-terminal domain 2 HF896_10360 PF00300 Histidine phosphatase superfamily (branch 1) HF896_10365 PF02541 Ppx/GppA phosphatase family HF896_10370 PF12849 PBP superfamily domain HF896_10375 PF00528 Binding-protein-dependent transport system inner membrane component HF896_10380 PF00528 Binding-protein-dependent transport system inner membrane component HF896_10385 PF00005 ABC transporter HF896_10390 PF01895 PhoU domain HF896_10395 PF00486 Transcriptional regulatory protein, C terminal HF896_10395 PF00072 Response regulator receiver domain HF896_10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_10400 PF00989 PAS fold HF896_10400 PF00512 His Kinase A (phospho-acceptor) domain HF896_10400 PF11808 Phosphate regulon sensor protein PhoR HF896_10405 PF01554 MatE HF896_10415 PF01197 Ribosomal protein L31 HF896_10420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HF896_10420 PF07497 Rho termination factor, RNA-binding domain HF896_10420 PF07498 Rho termination factor, N-terminal domain HF896_10425 PF00085 Thioredoxin HF896_10430 PF12705 PD-(D/E)XK nuclease superfamily HF896_10435 PF12705 PD-(D/E)XK nuclease superfamily HF896_10435 PF13361 UvrD-like helicase C-terminal domain HF896_10435 PF00580 UvrD/REP helicase N-terminal domain HF896_10440 PF02678 Pirin HF896_10440 PF05726 Pirin C-terminal cupin domain HF896_10445 PF02678 Pirin HF896_10445 PF05726 Pirin C-terminal cupin domain HF896_10460 PF07715 TonB-dependent Receptor Plug Domain HF896_10460 PF00593 TonB dependent receptor HF896_10475 PF01032 FecCD transport family HF896_10480 PF00005 ABC transporter HF896_10500 PF00528 Binding-protein-dependent transport system inner membrane component HF896_10505 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HF896_10505 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HF896_10510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_10510 PF03459 TOBE domain HF896_10520 PF12170 DNA polymerase III tau subunit V interacting with alpha HF896_10520 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HF896_10520 PF12169 DNA polymerase III subunits gamma and tau domain III HF896_10525 PF02575 YbaB/EbfC DNA-binding family HF896_10530 PF13662 Toprim domain HF896_10530 PF02132 RecR protein HF896_10540 PF00005 ABC transporter HF896_10540 PF09383 NIL domain HF896_10545 PF00528 Binding-protein-dependent transport system inner membrane component HF896_10550 PF03180 NLPA lipoprotein HF896_10555 PF03358 NADPH-dependent FMN reductase HF896_10560 PF02525 Flavodoxin-like fold HF896_10565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_10565 PF03466 LysR substrate binding domain HF896_10580 PF00528 Binding-protein-dependent transport system inner membrane component HF896_10585 PF00528 Binding-protein-dependent transport system inner membrane component HF896_10590 PF12857 TOBE-like domain HF896_10590 PF17850 CysA C-terminal regulatory domain HF896_10590 PF00005 ABC transporter HF896_10595 PF02600 Disulfide bond formation protein DsbB HF896_10600 PF01966 HD domain HF896_10605 PF00392 Bacterial regulatory proteins, gntR family HF896_10605 PF07729 FCD domain HF896_10615 PF00701 Dihydrodipicolinate synthetase family HF896_10620 PF13458 Periplasmic binding protein HF896_10625 PF00005 ABC transporter HF896_10630 PF00005 ABC transporter HF896_10630 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_10640 PF02653 Branched-chain amino acid transport system / permease component HF896_10650 PF17645 Arylmalonate decarboxylase HF896_10655 PF01266 FAD dependent oxidoreductase HF896_10665 PF00583 Acetyltransferase (GNAT) family HF896_10665 PF00696 Amino acid kinase family HF896_10670 PF01757 Acyltransferase family HF896_10680 PF01144 Coenzyme A transferase HF896_10685 PF01144 Coenzyme A transferase HF896_10700 PF01165 Ribosomal protein S21 HF896_10705 PF01458 Uncharacterized protein family (UPF0051) HF896_10710 PF00005 ABC transporter HF896_10720 PF00266 Aminotransferase class-V HF896_10725 PF01592 NifU-like N terminal domain HF896_10730 PF01883 Iron-sulfur cluster assembly protein HF896_10750 PF03061 Thioesterase superfamily HF896_10755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HF896_10760 PF02885 Glycosyl transferase family, helical bundle domain HF896_10760 PF00591 Glycosyl transferase family, a/b domain HF896_10770 PF07690 Major Facilitator Superfamily HF896_10775 PF04324 BFD-like [2Fe-2S] binding domain HF896_10775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HF896_10775 PF00384 Molybdopterin oxidoreductase HF896_10775 PF01568 Molydopterin dinucleotide binding domain HF896_10780 PF00355 Rieske [2Fe-2S] domain HF896_10785 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HF896_10785 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HF896_10785 PF04324 BFD-like [2Fe-2S] binding domain HF896_10785 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_10785 PF18267 Rubredoxin NAD+ reductase C-terminal domain HF896_10790 PF02321 Outer membrane efflux protein HF896_10795 PF00873 AcrB/AcrD/AcrF family HF896_10800 PF00529 HlyD membrane-fusion protein of T1SS HF896_10800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF896_10810 PF00571 CBS domain HF896_10810 PF01743 Poly A polymerase head domain HF896_10815 PF00814 Glycoprotease family HF896_10820 PF02321 Outer membrane efflux protein HF896_10825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF896_10830 PF00005 ABC transporter HF896_10830 PF02687 FtsX-like permease family HF896_10830 PF12704 MacB-like periplasmic core domain HF896_10835 PF12704 MacB-like periplasmic core domain HF896_10835 PF02687 FtsX-like permease family HF896_10835 PF00005 ABC transporter HF896_10845 PF13458 Periplasmic binding protein HF896_10850 PF03601 Conserved hypothetical protein 698 HF896_10855 PF03466 LysR substrate binding domain HF896_10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_10860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HF896_10860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HF896_10865 PF00456 Transketolase, thiamine diphosphate binding domain HF896_10865 PF02780 Transketolase, C-terminal domain HF896_10865 PF02779 Transketolase, pyrimidine binding domain HF896_10870 PF03466 LysR substrate binding domain HF896_10870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_10880 PF03480 Bacterial extracellular solute-binding protein, family 7 HF896_10880 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HF896_10890 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HF896_10895 PF00456 Transketolase, thiamine diphosphate binding domain HF896_10900 PF02779 Transketolase, pyrimidine binding domain HF896_10900 PF02780 Transketolase, C-terminal domain HF896_10905 PF13406 Transglycosylase SLT domain HF896_10910 PF01841 Transglutaminase-like superfamily HF896_10910 PF13559 Domain of unknown function (DUF4129) HF896_10910 PF11992 Domain of unknown function (DUF3488) HF896_10920 PF07726 ATPase family associated with various cellular activities (AAA) HF896_10920 PF17863 AAA lid domain HF896_10925 PF00850 Histone deacetylase domain HF896_10930 PF00378 Enoyl-CoA hydratase/isomerase HF896_10935 PF01012 Electron transfer flavoprotein domain HF896_10940 PF01012 Electron transfer flavoprotein domain HF896_10940 PF00766 Electron transfer flavoprotein FAD-binding domain HF896_10945 PF12806 Acetyl-CoA dehydrogenase C-terminal like HF896_10945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_10945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_10945 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_10960 PF01272 Transcription elongation factor, GreA/GreB, C-term HF896_10960 PF14760 Rnk N-terminus HF896_10980 PF04055 Radical SAM superfamily HF896_10995 PF00756 Putative esterase HF896_11000 PF00107 Zinc-binding dehydrogenase HF896_11000 PF08240 Alcohol dehydrogenase GroES-like domain HF896_11005 PF02583 Metal-sensitive transcriptional repressor HF896_11010 PF02347 Glycine cleavage system P-protein HF896_11015 PF01597 Glycine cleavage H-protein HF896_11020 PF08669 Glycine cleavage T-protein C-terminal barrel domain HF896_11020 PF01571 Aminomethyltransferase folate-binding domain HF896_11025 PF12706 Beta-lactamase superfamily domain HF896_11025 PF00753 Metallo-beta-lactamase superfamily HF896_11030 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HF896_11040 PF03480 Bacterial extracellular solute-binding protein, family 7 HF896_11045 PF01037 Lrp/AsnC ligand binding domain HF896_11050 PF00676 Dehydrogenase E1 component HF896_11055 PF02779 Transketolase, pyrimidine binding domain HF896_11055 PF02780 Transketolase, C-terminal domain HF896_11060 PF00364 Biotin-requiring enzyme HF896_11060 PF02780 Transketolase, C-terminal domain HF896_11060 PF02779 Transketolase, pyrimidine binding domain HF896_11065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HF896_11065 PF00364 Biotin-requiring enzyme HF896_11065 PF02817 e3 binding domain HF896_11070 PF03099 Biotin/lipoate A/B protein ligase family HF896_11080 PF00732 GMC oxidoreductase HF896_11080 PF05199 GMC oxidoreductase HF896_11085 PF00364 Biotin-requiring enzyme HF896_11085 PF00561 alpha/beta hydrolase fold HF896_11090 PF00158 Sigma-54 interaction domain HF896_11090 PF02954 Bacterial regulatory protein, Fis family HF896_11090 PF01590 GAF domain HF896_11095 PF00005 ABC transporter HF896_11100 PF02653 Branched-chain amino acid transport system / permease component HF896_11120 PF02515 CoA-transferase family III HF896_11130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_11130 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_11130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_11135 PF02515 CoA-transferase family III HF896_11140 PF08240 Alcohol dehydrogenase GroES-like domain HF896_11140 PF00107 Zinc-binding dehydrogenase HF896_11145 PF03401 Tripartite tricarboxylate transporter family receptor HF896_11150 PF00378 Enoyl-CoA hydratase/isomerase HF896_11155 PF08521 Two-component sensor kinase N-terminal HF896_11155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_11155 PF00512 His Kinase A (phospho-acceptor) domain HF896_11160 PF00072 Response regulator receiver domain HF896_11160 PF00486 Transcriptional regulatory protein, C terminal HF896_11170 PF00884 Sulfatase HF896_11170 PF08019 Phosphoethanolamine transferase EptA/EptB HF896_11190 PF00815 Histidinol dehydrogenase HF896_11200 PF00356 Bacterial regulatory proteins, lacI family HF896_11205 PF03401 Tripartite tricarboxylate transporter family receptor HF896_11210 PF03401 Tripartite tricarboxylate transporter family receptor HF896_11220 PF03328 HpcH/HpaI aldolase/citrate lyase family HF896_11245 PF00665 Integrase core domain HF896_11250 PF11867 Domain of unknown function (DUF3387) HF896_11250 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HF896_11250 PF18766 SWI2/SNF2 ATPase HF896_11265 PF01420 Type I restriction modification DNA specificity domain HF896_11270 PF02384 N-6 DNA Methylase HF896_11305 PF01022 Bacterial regulatory protein, arsR family HF896_11315 PF00873 AcrB/AcrD/AcrF family HF896_11320 PF02321 Outer membrane efflux protein HF896_11325 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_11340 PF00581 Rhodanese-like domain HF896_11355 PF08521 Two-component sensor kinase N-terminal HF896_11355 PF00512 His Kinase A (phospho-acceptor) domain HF896_11355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_11360 PF00072 Response regulator receiver domain HF896_11360 PF00486 Transcriptional regulatory protein, C terminal HF896_11365 PF03401 Tripartite tricarboxylate transporter family receptor HF896_11370 PF06968 Biotin and Thiamin Synthesis associated domain HF896_11370 PF04055 Radical SAM superfamily HF896_11380 PF02785 Biotin carboxylase C-terminal domain HF896_11380 PF18140 Propionyl-coenzyme A carboxylase BT domain HF896_11380 PF00364 Biotin-requiring enzyme HF896_11380 PF00289 Biotin carboxylase, N-terminal domain HF896_11380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HF896_11385 PF01039 Carboxyl transferase domain HF896_11395 PF01642 Methylmalonyl-CoA mutase HF896_11395 PF02310 B12 binding domain HF896_11400 PF09856 Predicted transcriptional regulator (DUF2083) HF896_11400 PF06114 IrrE N-terminal-like domain HF896_11400 PF01381 Helix-turn-helix HF896_11405 PF02515 CoA-transferase family III HF896_11410 PF03401 Tripartite tricarboxylate transporter family receptor HF896_11415 PF00682 HMGL-like HF896_11420 PF07729 FCD domain HF896_11420 PF00392 Bacterial regulatory proteins, gntR family HF896_11425 PF00501 AMP-binding enzyme HF896_11435 PF00440 Bacterial regulatory proteins, tetR family HF896_11445 PF01207 Dihydrouridine synthase (Dus) HF896_11460 PF04060 Putative Fe-S cluster HF896_11465 PF00155 Aminotransferase class I and II HF896_11470 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HF896_11470 PF14602 Hexapeptide repeat of succinyl-transferase HF896_11475 PF00437 Type II/IV secretion system protein HF896_11480 PF07687 Peptidase dimerisation domain HF896_11480 PF01546 Peptidase family M20/M25/M40 HF896_11485 PF05175 Methyltransferase small domain HF896_11490 PF03466 LysR substrate binding domain HF896_11490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_11495 PF00501 AMP-binding enzyme HF896_11495 PF13193 AMP-binding enzyme C-terminal domain HF896_11500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_11500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_11500 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_11505 PF03401 Tripartite tricarboxylate transporter family receptor HF896_11510 PF12848 ABC transporter HF896_11510 PF00005 ABC transporter HF896_11515 PF00106 short chain dehydrogenase HF896_11520 PF00108 Thiolase, N-terminal domain HF896_11520 PF02803 Thiolase, C-terminal domain HF896_11525 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HF896_11540 PF13417 Glutathione S-transferase, N-terminal domain HF896_11545 PF01557 Fumarylacetoacetate (FAA) hydrolase family HF896_11555 PF07690 Major Facilitator Superfamily HF896_11560 PF00905 Penicillin binding protein transpeptidase domain HF896_11560 PF00912 Transglycosylase HF896_11560 PF17092 Penicillin-binding protein OB-like domain HF896_11565 PF01734 Patatin-like phospholipase HF896_11570 PF01653 NAD-dependent DNA ligase adenylation domain HF896_11570 PF03120 NAD-dependent DNA ligase OB-fold domain HF896_11570 PF00533 BRCA1 C Terminus (BRCT) domain HF896_11570 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HF896_11570 PF12826 Helix-hairpin-helix motif HF896_11580 PF06470 SMC proteins Flexible Hinge Domain HF896_11580 PF02463 RecF/RecN/SMC N terminal domain HF896_11590 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HF896_11595 PF00990 Diguanylate cyclase, GGDEF domain HF896_11595 PF00563 EAL domain HF896_11595 PF03707 Bacterial signalling protein N terminal repeat HF896_11600 PF07690 Major Facilitator Superfamily HF896_11605 PF00324 Amino acid permease HF896_11610 PF00877 NlpC/P60 family HF896_11625 PF02796 Helix-turn-helix domain of resolvase HF896_11625 PF00239 Resolvase, N terminal domain HF896_11660 PF01526 Tn3 transposase DDE domain HF896_11660 PF13700 Domain of unknown function (DUF4158) HF896_11670 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HF896_11670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HF896_11685 PF03401 Tripartite tricarboxylate transporter family receptor HF896_11690 PF03972 MmgE/PrpD family HF896_11695 PF03737 Aldolase/RraA HF896_11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_11700 PF03466 LysR substrate binding domain HF896_11710 PF03401 Tripartite tricarboxylate transporter family receptor HF896_11725 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_11725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HF896_11730 PF02817 e3 binding domain HF896_11730 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HF896_11730 PF00364 Biotin-requiring enzyme HF896_11735 PF17831 Pyruvate dehydrogenase E1 component middle domain HF896_11735 PF00456 Transketolase, thiamine diphosphate binding domain HF896_11740 PF00989 PAS fold HF896_11740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_11740 PF00512 His Kinase A (phospho-acceptor) domain HF896_11745 PF00196 Bacterial regulatory proteins, luxR family HF896_11745 PF00072 Response regulator receiver domain HF896_11750 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HF896_11750 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HF896_11755 PF01432 Peptidase family M3 HF896_11765 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HF896_11770 PF01180 Dihydroorotate dehydrogenase HF896_11790 PF01266 FAD dependent oxidoreductase HF896_11805 PF00929 Exonuclease HF896_11810 PF00111 2Fe-2S iron-sulfur cluster binding domain HF896_11815 PF00012 Hsp70 protein HF896_11820 PF07743 HSCB C-terminal oligomerisation domain HF896_11825 PF01521 Iron-sulphur cluster biosynthesis HF896_11830 PF01592 NifU-like N terminal domain HF896_11835 PF00266 Aminotransferase class-V HF896_11840 PF02082 Transcriptional regulator HF896_11845 PF02151 UvrB/uvrC motif HF896_11845 PF00271 Helicase conserved C-terminal domain HF896_11845 PF17757 UvrB interaction domain HF896_11845 PF12344 Ultra-violet resistance protein B HF896_11845 PF04851 Type III restriction enzyme, res subunit HF896_11850 PF00155 Aminotransferase class I and II HF896_11855 PF08497 Radical SAM N-terminal HF896_11855 PF04055 Radical SAM superfamily HF896_11855 PF11842 Domain of unknown function (DUF3362) HF896_11860 PF00127 Copper binding proteins, plastocyanin/azurin family HF896_11865 PF01205 Uncharacterized protein family UPF0029 HF896_11865 PF09186 Domain of unknown function (DUF1949) HF896_11870 PF00291 Pyridoxal-phosphate dependent enzyme HF896_11875 PF05958 tRNA (Uracil-5-)-methyltransferase HF896_11885 PF04542 Sigma-70 region 2 HF896_11885 PF08281 Sigma-70, region 4 HF896_11910 PF08534 Redoxin HF896_11925 PF00072 Response regulator receiver domain HF896_11925 PF00196 Bacterial regulatory proteins, luxR family HF896_11930 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HF896_11930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HF896_11935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_11935 PF13188 PAS domain HF896_11935 PF00072 Response regulator receiver domain HF896_11935 PF00512 His Kinase A (phospho-acceptor) domain HF896_11935 PF08448 PAS fold HF896_11940 PF00849 RNA pseudouridylate synthase HF896_11945 PF00106 short chain dehydrogenase HF896_11950 PF02803 Thiolase, C-terminal domain HF896_11950 PF00108 Thiolase, N-terminal domain HF896_11955 PF03401 Tripartite tricarboxylate transporter family receptor HF896_11960 PF01814 Hemerythrin HHE cation binding domain HF896_11965 PF00582 Universal stress protein family HF896_11990 PF03401 Tripartite tricarboxylate transporter family receptor HF896_12010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HF896_12010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HF896_12015 PF13458 Periplasmic binding protein HF896_12030 PF00883 Cytosol aminopeptidase family, catalytic domain HF896_12030 PF02789 Cytosol aminopeptidase family, N-terminal domain HF896_12050 PF03466 LysR substrate binding domain HF896_12050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_12055 PF00155 Aminotransferase class I and II HF896_12060 PF03466 LysR substrate binding domain HF896_12060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_12070 PF10150 Ribonuclease E/G family HF896_12070 PF00575 S1 RNA binding domain HF896_12075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HF896_12075 PF14824 Sirohaem biosynthesis protein central HF896_12075 PF10414 Sirohaem synthase dimerisation region HF896_12080 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HF896_12085 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HF896_12095 PF17805 AsnC-like ligand binding domain HF896_12095 PF13404 AsnC-type helix-turn-helix domain HF896_12100 PF17805 AsnC-like ligand binding domain HF896_12105 PF13186 Iron-sulfur cluster-binding domain HF896_12105 PF04055 Radical SAM superfamily HF896_12120 PF02545 Maf-like protein HF896_12125 PF02590 Predicted SPOUT methyltransferase HF896_12135 PF01218 Coproporphyrinogen III oxidase HF896_12140 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HF896_12140 PF02844 Phosphoribosylglycinamide synthetase, N domain HF896_12140 PF02843 Phosphoribosylglycinamide synthetase, C domain HF896_12145 PF01709 Transcriptional regulator HF896_12150 PF05872 Bacterial protein of unknown function (DUF853) HF896_12155 PF00043 Glutathione S-transferase, C-terminal domain HF896_12155 PF02798 Glutathione S-transferase, N-terminal domain HF896_12160 PF00155 Aminotransferase class I and II HF896_12160 PF00392 Bacterial regulatory proteins, gntR family HF896_12170 PF04172 LrgB-like family HF896_12190 PF00665 Integrase core domain HF896_12195 PF01695 IstB-like ATP binding protein HF896_12205 PF01654 Cytochrome bd terminal oxidase subunit I HF896_12210 PF12801 4Fe-4S binding domain HF896_12210 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HF896_12210 PF13746 4Fe-4S dicluster domain HF896_12225 PF00872 Transposase, Mutator family HF896_12260 PF01709 Transcriptional regulator HF896_12265 PF00291 Pyridoxal-phosphate dependent enzyme HF896_12275 PF13302 Acetyltransferase (GNAT) domain HF896_12280 PF01594 AI-2E family transporter HF896_12285 PF02146 Sir2 family HF896_12290 PF00929 Exonuclease HF896_12290 PF08411 Exonuclease C-terminal HF896_12295 PF13406 Transglycosylase SLT domain HF896_12300 PF00005 ABC transporter HF896_12315 PF00440 Bacterial regulatory proteins, tetR family HF896_12325 PF00654 Voltage gated chloride channel HF896_12330 PF13840 ACT domain HF896_12330 PF01842 ACT domain HF896_12330 PF00696 Amino acid kinase family HF896_12335 PF09179 TilS substrate binding domain HF896_12335 PF01171 PP-loop family HF896_12340 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HF896_12350 PF01406 tRNA synthetases class I (C) catalytic domain HF896_12350 PF09190 DALR domain HF896_12365 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HF896_12370 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HF896_12375 PF00149 Calcineurin-like phosphoesterase HF896_12380 PF06167 Glucose-regulated metallo-peptidase M90 HF896_12385 PF01261 Xylose isomerase-like TIM barrel HF896_12390 PF00596 Class II Aldolase and Adducin N-terminal domain HF896_12395 PF07005 Sugar-binding N-terminal domain HF896_12395 PF17042 Nucleotide-binding C-terminal domain HF896_12400 PF01370 NAD dependent epimerase/dehydratase family HF896_12405 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HF896_12405 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HF896_12410 PF07690 Major Facilitator Superfamily HF896_12420 PF00392 Bacterial regulatory proteins, gntR family HF896_12420 PF07729 FCD domain HF896_12425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_12425 PF03466 LysR substrate binding domain HF896_12430 PF03401 Tripartite tricarboxylate transporter family receptor HF896_12435 PF01425 Amidase HF896_12440 PF17831 Pyruvate dehydrogenase E1 component middle domain HF896_12440 PF00456 Transketolase, thiamine diphosphate binding domain HF896_12445 PF01037 Lrp/AsnC ligand binding domain HF896_12455 PF02230 Phospholipase/Carboxylesterase HF896_12460 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HF896_12465 PF00472 RF-1 domain HF896_12475 PF01220 Dehydroquinase class II HF896_12485 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HF896_12485 PF00749 tRNA synthetases class I (E and Q), catalytic domain HF896_12500 PF10415 Fumarase C C-terminus HF896_12500 PF00206 Lyase HF896_12510 PF00849 RNA pseudouridylate synthase HF896_12515 PF00892 EamA-like transporter family HF896_12520 PF00565 Staphylococcal nuclease homologue HF896_12540 PF00849 RNA pseudouridylate synthase HF896_12550 PF01926 50S ribosome-binding GTPase HF896_12555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_12555 PF03466 LysR substrate binding domain HF896_12560 PF03401 Tripartite tricarboxylate transporter family receptor HF896_12565 PF01266 FAD dependent oxidoreductase HF896_12575 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_12575 PF04324 BFD-like [2Fe-2S] binding domain HF896_12580 PF01042 Endoribonuclease L-PSP HF896_12590 PF12805 FUSC-like inner membrane protein yccS HF896_12595 PF04262 Glutamate-cysteine ligase HF896_12600 PF00106 short chain dehydrogenase HF896_12615 PF00925 GTP cyclohydrolase II HF896_12615 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HF896_12620 PF00885 6,7-dimethyl-8-ribityllumazine synthase HF896_12625 PF01029 NusB family HF896_12630 PF00155 Aminotransferase class I and II HF896_12635 PF03061 Thioesterase superfamily HF896_12640 PF01618 MotA/TolQ/ExbB proton channel family HF896_12645 PF02472 Biopolymer transport protein ExbD/TolR HF896_12655 PF07690 Major Facilitator Superfamily HF896_12655 PF00083 Sugar (and other) transporter HF896_12660 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HF896_12660 PF06481 COX Aromatic Rich Motif HF896_12665 PF00115 Cytochrome C and Quinol oxidase polypeptide I HF896_12670 PF00510 Cytochrome c oxidase subunit III HF896_12675 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HF896_12685 PF00512 His Kinase A (phospho-acceptor) domain HF896_12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_12690 PF00072 Response regulator receiver domain HF896_12715 PF00535 Glycosyl transferase family 2 HF896_12740 PF12804 MobA-like NTP transferase domain HF896_12740 PF00132 Bacterial transferase hexapeptide (six repeats) HF896_12745 PF02625 XdhC and CoxI family HF896_12745 PF13478 XdhC Rossmann domain HF896_12760 PF02190 ATP-dependent protease La (LON) substrate-binding domain HF896_12760 PF00004 ATPase family associated with various cellular activities (AAA) HF896_12760 PF05362 Lon protease (S16) C-terminal proteolytic domain HF896_12765 PF03450 CO dehydrogenase flavoprotein C-terminal domain HF896_12765 PF00941 FAD binding domain in molybdopterin dehydrogenase HF896_12770 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HF896_12770 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HF896_12775 PF01799 [2Fe-2S] binding domain HF896_12775 PF00111 2Fe-2S iron-sulfur cluster binding domain HF896_12780 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_12780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HF896_12785 PF02515 CoA-transferase family III HF896_12790 PF03401 Tripartite tricarboxylate transporter family receptor HF896_12795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_12795 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_12795 PF18158 Adaptive response protein AidB N-terminal domain HF896_12800 PF03466 LysR substrate binding domain HF896_12800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_12810 PF00330 Aconitase family (aconitate hydratase) HF896_12810 PF11791 Aconitate B N-terminal domain HF896_12810 PF06434 Aconitate hydratase 2 N-terminus HF896_12830 PF00056 lactate/malate dehydrogenase, NAD binding domain HF896_12830 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HF896_12835 PF00392 Bacterial regulatory proteins, gntR family HF896_12835 PF07702 UTRA domain HF896_12840 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HF896_12845 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HF896_12850 PF00890 FAD binding domain HF896_12850 PF02910 Fumarate reductase flavoprotein C-term HF896_12855 PF13085 2Fe-2S iron-sulfur cluster binding domain HF896_12860 PF03937 Flavinator of succinate dehydrogenase HF896_12865 PF00285 Citrate synthase, C-terminal domain HF896_12910 PF01695 IstB-like ATP binding protein HF896_12915 PF00665 Integrase core domain HF896_12965 PF13356 Arm DNA-binding domain HF896_12965 PF00589 Phage integrase family HF896_12970 PF02540 NAD synthase HF896_12970 PF00117 Glutamine amidotransferase class-I HF896_12970 PF00958 GMP synthase C terminal domain HF896_12975 PF00571 CBS domain HF896_12975 PF00478 IMP dehydrogenase / GMP reductase domain HF896_12985 PF03658 RnfH family Ubiquitin HF896_12990 PF03364 Polyketide cyclase / dehydrase and lipid transport HF896_12995 PF01668 SmpB protein HF896_13005 PF04542 Sigma-70 region 2 HF896_13005 PF08281 Sigma-70, region 4 HF896_13015 PF00378 Enoyl-CoA hydratase/isomerase HF896_13030 PF16198 tRNA pseudouridylate synthase B C-terminal domain HF896_13030 PF01509 TruB family pseudouridylate synthase (N terminal domain) HF896_13035 PF02033 Ribosome-binding factor A HF896_13040 PF08364 Bacterial translation initiation factor IF-2 associated region HF896_13040 PF11987 Translation-initiation factor 2 HF896_13040 PF04760 Translation initiation factor IF-2, N-terminal region HF896_13040 PF00009 Elongation factor Tu GTP binding domain HF896_13045 PF08529 NusA N-terminal domain HF896_13045 PF00575 S1 RNA binding domain HF896_13045 PF13184 NusA-like KH domain HF896_13050 PF02576 RimP N-terminal domain HF896_13055 PF00085 Thioredoxin HF896_13060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HF896_13060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HF896_13060 PF00034 Cytochrome c HF896_13075 PF08206 Ribonuclease B OB domain HF896_13075 PF17876 Cold shock domain HF896_13075 PF08461 Ribonuclease R winged-helix domain HF896_13075 PF00773 RNB domain HF896_13075 PF00575 S1 RNA binding domain HF896_13100 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HF896_13100 PF01464 Transglycosylase SLT domain HF896_13105 PF00464 Serine hydroxymethyltransferase HF896_13110 PF03477 ATP cone domain HF896_13115 PF01264 Chorismate synthase HF896_13125 PF01053 Cys/Met metabolism PLP-dependent enzyme HF896_13130 PF12697 Alpha/beta hydrolase family HF896_13135 PF00690 Cation transporter/ATPase, N-terminus HF896_13135 PF00689 Cation transporting ATPase, C-terminus HF896_13140 PF13419 Haloacid dehalogenase-like hydrolase HF896_13145 PF00762 Ferrochelatase HF896_13170 PF10605 3HB-oligomer hydrolase (3HBOH) HF896_13175 PF01970 Tripartite tricarboxylate transporter TctA family HF896_13185 PF03401 Tripartite tricarboxylate transporter family receptor HF896_13190 PF00486 Transcriptional regulatory protein, C terminal HF896_13190 PF00072 Response regulator receiver domain HF896_13195 PF08521 Two-component sensor kinase N-terminal HF896_13195 PF00512 His Kinase A (phospho-acceptor) domain HF896_13195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_13200 PF01479 S4 domain HF896_13210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HF896_13220 PF06114 IrrE N-terminal-like domain HF896_13220 PF09856 Predicted transcriptional regulator (DUF2083) HF896_13220 PF01381 Helix-turn-helix HF896_13230 PF00285 Citrate synthase, C-terminal domain HF896_13235 PF00694 Aconitase C-terminal domain HF896_13235 PF00330 Aconitase family (aconitate hydratase) HF896_13240 PF04303 PrpF protein HF896_13265 PF03466 LysR substrate binding domain HF896_13265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_13270 PF08267 Cobalamin-independent synthase, N-terminal domain HF896_13270 PF01717 Cobalamin-independent synthase, Catalytic domain HF896_13280 PF00875 DNA photolyase HF896_13280 PF03441 FAD binding domain of DNA photolyase HF896_13285 PF07690 Major Facilitator Superfamily HF896_13300 PF00107 Zinc-binding dehydrogenase HF896_13300 PF16884 N-terminal domain of oxidoreductase HF896_13325 PF13419 Haloacid dehalogenase-like hydrolase HF896_13335 PF00691 OmpA family HF896_13340 PF03989 DNA gyrase C-terminal domain, beta-propeller HF896_13340 PF00521 DNA gyrase/topoisomerase IV, subunit A HF896_13345 PF00266 Aminotransferase class-V HF896_13350 PF01842 ACT domain HF896_13350 PF00800 Prephenate dehydratase HF896_13350 PF01817 Chorismate mutase type II HF896_13355 PF02153 Prephenate dehydrogenase HF896_13360 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HF896_13365 PF00575 S1 RNA binding domain HF896_13370 PF00216 Bacterial DNA-binding protein HF896_13380 PF00990 Diguanylate cyclase, GGDEF domain HF896_13380 PF17158 Membrane-associated sensor, integral membrane domain HF896_13390 PF01176 Translation initiation factor 1A / IF-1 HF896_13395 PF00005 ABC transporter HF896_13395 PF00571 CBS domain HF896_13400 PF02666 Phosphatidylserine decarboxylase HF896_13415 PF02082 Transcriptional regulator HF896_13430 PF00216 Bacterial DNA-binding protein HF896_13450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_13450 PF03466 LysR substrate binding domain HF896_13455 PF00180 Isocitrate/isopropylmalate dehydrogenase HF896_13460 PF01734 Patatin-like phospholipase HF896_13465 PF03466 LysR substrate binding domain HF896_13465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_13470 PF03401 Tripartite tricarboxylate transporter family receptor HF896_13475 PF08666 SAF domain HF896_13475 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HF896_13480 PF00171 Aldehyde dehydrogenase family HF896_13485 PF03328 HpcH/HpaI aldolase/citrate lyase family HF896_13495 PF01177 Asp/Glu/Hydantoin racemase HF896_13510 PF01979 Amidohydrolase family HF896_13515 PF05962 HutD HF896_13520 PF00005 ABC transporter HF896_13525 PF00528 Binding-protein-dependent transport system inner membrane component HF896_13540 PF17392 Urocanase C-terminal domain HF896_13540 PF01175 Urocanase Rossmann-like domain HF896_13540 PF17391 Urocanase N-terminal domain HF896_13545 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HF896_13550 PF07702 UTRA domain HF896_13550 PF00392 Bacterial regulatory proteins, gntR family HF896_13555 PF00221 Aromatic amino acid lyase HF896_13560 PF07702 UTRA domain HF896_13560 PF00392 Bacterial regulatory proteins, gntR family HF896_13565 PF00005 ABC transporter HF896_13570 PF00528 Binding-protein-dependent transport system inner membrane component HF896_13580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_13580 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_13580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_13585 PF02515 CoA-transferase family III HF896_13590 PF03466 LysR substrate binding domain HF896_13590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_13595 PF03401 Tripartite tricarboxylate transporter family receptor HF896_13600 PF03401 Tripartite tricarboxylate transporter family receptor HF896_13605 PF00682 HMGL-like HF896_13610 PF02515 CoA-transferase family III HF896_13615 PF03466 LysR substrate binding domain HF896_13615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_13625 PF09285 Elongation factor P, C-terminal HF896_13625 PF01132 Elongation factor P (EF-P) OB domain HF896_13625 PF08207 Elongation factor P (EF-P) KOW-like domain HF896_13635 PF00474 Sodium:solute symporter family HF896_13645 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HF896_13645 PF00391 PEP-utilising enzyme, mobile domain HF896_13645 PF02896 PEP-utilising enzyme, TIM barrel domain HF896_13650 PF03618 Kinase/pyrophosphorylase HF896_13655 PF00873 AcrB/AcrD/AcrF family HF896_13680 PF06628 Catalase-related immune-responsive HF896_13680 PF00199 Catalase HF896_13685 PF13192 Thioredoxin domain HF896_13685 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_13690 PF00578 AhpC/TSA family HF896_13690 PF10417 C-terminal domain of 1-Cys peroxiredoxin HF896_13695 PF00210 Ferritin-like domain HF896_13700 PF05247 Flagellar transcriptional activator (FlhD) HF896_13705 PF05280 Flagellar transcriptional activator (FlhC) HF896_13710 PF00311 Phosphoenolpyruvate carboxylase HF896_13715 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HF896_13715 PF03900 Porphobilinogen deaminase, C-terminal domain HF896_13735 PF00115 Cytochrome C and Quinol oxidase polypeptide I HF896_13760 PF10458 Valyl tRNA synthetase tRNA binding arm HF896_13760 PF00133 tRNA synthetases class I (I, L, M and V) HF896_13760 PF08264 Anticodon-binding domain of tRNA HF896_13765 PF00483 Nucleotidyl transferase HF896_13770 PF01206 Sulfurtransferase TusA HF896_13775 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain HF896_13775 PF00293 NUDIX domain HF896_13775 PF09297 NADH pyrophosphatase zinc ribbon domain HF896_13780 PF00291 Pyridoxal-phosphate dependent enzyme HF896_13785 PF01863 Protein of unknown function DUF45 HF896_13810 PF00665 Integrase core domain HF896_13815 PF01695 IstB-like ATP binding protein HF896_13825 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF896_13830 PF03401 Tripartite tricarboxylate transporter family receptor HF896_13855 PF01039 Carboxyl transferase domain HF896_13860 PF00289 Biotin carboxylase, N-terminal domain HF896_13860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HF896_13860 PF02785 Biotin carboxylase C-terminal domain HF896_13860 PF00364 Biotin-requiring enzyme HF896_13865 PF09339 IclR helix-turn-helix domain HF896_13865 PF01614 Bacterial transcriptional regulator HF896_13870 PF09339 IclR helix-turn-helix domain HF896_13875 PF00378 Enoyl-CoA hydratase/isomerase HF896_13880 PF00378 Enoyl-CoA hydratase/isomerase HF896_13885 PF03401 Tripartite tricarboxylate transporter family receptor HF896_13895 PF01575 MaoC like domain HF896_13900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_13900 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_13900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_13905 PF02515 CoA-transferase family III HF896_13910 PF03401 Tripartite tricarboxylate transporter family receptor HF896_13920 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HF896_13920 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HF896_13925 PF02515 CoA-transferase family III HF896_13930 PF00561 alpha/beta hydrolase fold HF896_13935 PF03401 Tripartite tricarboxylate transporter family receptor HF896_13940 PF03060 Nitronate monooxygenase HF896_13945 PF00378 Enoyl-CoA hydratase/isomerase HF896_13950 PF00766 Electron transfer flavoprotein FAD-binding domain HF896_13950 PF01012 Electron transfer flavoprotein domain HF896_13955 PF01012 Electron transfer flavoprotein domain HF896_13970 PF01575 MaoC like domain HF896_13975 PF03401 Tripartite tricarboxylate transporter family receptor HF896_13980 PF03401 Tripartite tricarboxylate transporter family receptor HF896_13990 PF03401 Tripartite tricarboxylate transporter family receptor HF896_13995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_13995 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_13995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_14000 PF00378 Enoyl-CoA hydratase/isomerase HF896_14010 PF13380 CoA binding domain HF896_14010 PF00583 Acetyltransferase (GNAT) family HF896_14010 PF13607 Succinyl-CoA ligase like flavodoxin domain HF896_14020 PF01614 Bacterial transcriptional regulator HF896_14020 PF09339 IclR helix-turn-helix domain HF896_14035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_14035 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_14035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_14040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_14040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_14045 PF02515 CoA-transferase family III HF896_14050 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_14050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_14050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_14055 PF00440 Bacterial regulatory proteins, tetR family HF896_14055 PF17932 Tetracyclin repressor-like, C-terminal domain HF896_14065 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HF896_14065 PF12008 Type I restriction and modification enzyme - subunit R C terminal HF896_14065 PF18766 SWI2/SNF2 ATPase HF896_14075 PF00665 Integrase core domain HF896_14080 PF01695 IstB-like ATP binding protein HF896_14090 PF01695 IstB-like ATP binding protein HF896_14095 PF00665 Integrase core domain HF896_14110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_14110 PF03466 LysR substrate binding domain HF896_14120 PF01515 Phosphate acetyl/butaryl transferase HF896_14125 PF00582 Universal stress protein family HF896_14130 PF00106 short chain dehydrogenase HF896_14140 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HF896_14140 PF00561 alpha/beta hydrolase fold HF896_14145 PF00440 Bacterial regulatory proteins, tetR family HF896_14155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF896_14160 PF00005 ABC transporter HF896_14175 PF02321 Outer membrane efflux protein HF896_14180 PF00465 Iron-containing alcohol dehydrogenase HF896_14190 PF10996 Beta-Casp domain HF896_14190 PF00753 Metallo-beta-lactamase superfamily HF896_14190 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HF896_14195 PF11892 Domain of unknown function (DUF3412) HF896_14195 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HF896_14195 PF03641 Possible lysine decarboxylase HF896_14210 PF00871 Acetokinase family HF896_14215 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase HF896_14215 PF09363 XFP C-terminal domain HF896_14215 PF09364 XFP N-terminal domain HF896_14240 PF04542 Sigma-70 region 2 HF896_14240 PF08281 Sigma-70, region 4 HF896_14255 PF00175 Oxidoreductase NAD-binding domain HF896_14255 PF00111 2Fe-2S iron-sulfur cluster binding domain HF896_14255 PF00970 Oxidoreductase FAD-binding domain HF896_14260 PF02424 ApbE family HF896_14270 PF01292 Prokaryotic cytochrome b561 HF896_14275 PF13545 Crp-like helix-turn-helix domain HF896_14275 PF00027 Cyclic nucleotide-binding domain HF896_14285 PF00403 Heavy-metal-associated domain HF896_14295 PF10502 Signal peptidase, peptidase S26 HF896_14310 PF13614 AAA domain HF896_14340 PF01381 Helix-turn-helix HF896_14345 PF05284 Protein of unknown function (DUF736) HF896_14355 PF03551 Transcriptional regulator PadR-like family HF896_14365 PF00872 Transposase, Mutator family HF896_14370 PF09278 MerR, DNA binding HF896_14370 PF00376 MerR family regulatory protein HF896_14375 PF02411 MerT mercuric transport protein HF896_14380 PF00403 Heavy-metal-associated domain HF896_14395 PF02195 ParB-like nuclease domain HF896_14400 PF06067 Domain of unknown function (DUF932) HF896_14420 PF00004 ATPase family associated with various cellular activities (AAA) HF896_14435 PF05973 Phage derived protein Gp49-like (DUF891) HF896_14450 PF00378 Enoyl-CoA hydratase/isomerase HF896_14460 PF13193 AMP-binding enzyme C-terminal domain HF896_14460 PF00501 AMP-binding enzyme HF896_14465 PF00682 HMGL-like HF896_14470 PF00364 Biotin-requiring enzyme HF896_14470 PF00289 Biotin carboxylase, N-terminal domain HF896_14470 PF02785 Biotin carboxylase C-terminal domain HF896_14470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HF896_14475 PF01039 Carboxyl transferase domain HF896_14480 PF14535 AMP-binding enzyme C-terminal domain HF896_14480 PF00501 AMP-binding enzyme HF896_14485 PF00378 Enoyl-CoA hydratase/isomerase HF896_14505 PF00216 Bacterial DNA-binding protein HF896_14515 PF01066 CDP-alcohol phosphatidyltransferase HF896_14520 PF08459 UvrC Helix-hairpin-helix N-terminal HF896_14520 PF01541 GIY-YIG catalytic domain HF896_14550 PF09339 IclR helix-turn-helix domain HF896_14555 PF00106 short chain dehydrogenase HF896_14560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_14560 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_14560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_14565 PF00501 AMP-binding enzyme HF896_14565 PF13193 AMP-binding enzyme C-terminal domain HF896_14575 PF00005 ABC transporter HF896_14580 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_14580 PF00005 ABC transporter HF896_14585 PF11862 Domain of unknown function (DUF3382) HF896_14585 PF02653 Branched-chain amino acid transport system / permease component HF896_14590 PF02653 Branched-chain amino acid transport system / permease component HF896_14595 PF03401 Tripartite tricarboxylate transporter family receptor HF896_14600 PF13609 Gram-negative porin HF896_14610 PF00378 Enoyl-CoA hydratase/isomerase HF896_14615 PF00171 Aldehyde dehydrogenase family HF896_14620 PF00171 Aldehyde dehydrogenase family HF896_14630 PF03401 Tripartite tricarboxylate transporter family receptor HF896_14640 PF00171 Aldehyde dehydrogenase family HF896_14645 PF08240 Alcohol dehydrogenase GroES-like domain HF896_14645 PF00107 Zinc-binding dehydrogenase HF896_14650 PF13458 Periplasmic binding protein HF896_14655 PF02653 Branched-chain amino acid transport system / permease component HF896_14660 PF02653 Branched-chain amino acid transport system / permease component HF896_14660 PF11862 Domain of unknown function (DUF3382) HF896_14665 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_14665 PF00005 ABC transporter HF896_14670 PF00005 ABC transporter HF896_14680 PF03328 HpcH/HpaI aldolase/citrate lyase family HF896_14685 PF02515 CoA-transferase family III HF896_14695 PF00766 Electron transfer flavoprotein FAD-binding domain HF896_14695 PF01012 Electron transfer flavoprotein domain HF896_14700 PF01012 Electron transfer flavoprotein domain HF896_14705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_14705 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_14705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_14710 PF03466 LysR substrate binding domain HF896_14710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_14720 PF02515 CoA-transferase family III HF896_14730 PF16177 Acetyl-coenzyme A synthetase N-terminus HF896_14730 PF00501 AMP-binding enzyme HF896_14730 PF13193 AMP-binding enzyme C-terminal domain HF896_14735 PF02803 Thiolase, C-terminal domain HF896_14735 PF00108 Thiolase, N-terminal domain HF896_14745 PF01575 MaoC like domain HF896_14750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_14750 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_14750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_14760 PF09339 IclR helix-turn-helix domain HF896_14765 PF09339 IclR helix-turn-helix domain HF896_14785 PF05199 GMC oxidoreductase HF896_14785 PF00732 GMC oxidoreductase HF896_14790 PF00171 Aldehyde dehydrogenase family HF896_14800 PF02515 CoA-transferase family III HF896_14805 PF03401 Tripartite tricarboxylate transporter family receptor HF896_14810 PF00378 Enoyl-CoA hydratase/isomerase HF896_14815 PF00106 short chain dehydrogenase HF896_14820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_14820 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_14820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_14840 PF02803 Thiolase, C-terminal domain HF896_14840 PF00108 Thiolase, N-terminal domain HF896_14845 PF03401 Tripartite tricarboxylate transporter family receptor HF896_14850 PF02515 CoA-transferase family III HF896_14855 PF02515 CoA-transferase family III HF896_14860 PF03401 Tripartite tricarboxylate transporter family receptor HF896_14870 PF02515 CoA-transferase family III HF896_14875 PF03401 Tripartite tricarboxylate transporter family receptor HF896_14880 PF03466 LysR substrate binding domain HF896_14880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_14895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HF896_14895 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_14900 PF00005 ABC transporter HF896_14905 PF00005 ABC transporter HF896_14905 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_14915 PF02653 Branched-chain amino acid transport system / permease component HF896_14920 PF13458 Periplasmic binding protein HF896_14925 PF00378 Enoyl-CoA hydratase/isomerase HF896_14930 PF00881 Nitroreductase family HF896_14940 PF03401 Tripartite tricarboxylate transporter family receptor HF896_14945 PF02515 CoA-transferase family III HF896_14950 PF02515 CoA-transferase family III HF896_14955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_14955 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_14955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_14960 PF01575 MaoC like domain HF896_14965 PF03328 HpcH/HpaI aldolase/citrate lyase family HF896_14970 PF17932 Tetracyclin repressor-like, C-terminal domain HF896_14970 PF00440 Bacterial regulatory proteins, tetR family HF896_14985 PF00004 ATPase family associated with various cellular activities (AAA) HF896_14985 PF05362 Lon protease (S16) C-terminal proteolytic domain HF896_14985 PF02190 ATP-dependent protease La (LON) substrate-binding domain HF896_14990 PF07724 AAA domain (Cdc48 subfamily) HF896_14990 PF06689 ClpX C4-type zinc finger HF896_14990 PF10431 C-terminal, D2-small domain, of ClpB protein HF896_14995 PF00574 Clp protease HF896_15000 PF05697 Bacterial trigger factor protein (TF) HF896_15000 PF05698 Bacterial trigger factor protein (TF) C-terminus HF896_15000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HF896_15010 PF00873 AcrB/AcrD/AcrF family HF896_15015 PF13533 Biotin-lipoyl like HF896_15030 PF00672 HAMP domain HF896_15030 PF02203 Tar ligand binding domain homologue HF896_15030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF896_15035 PF01593 Flavin containing amine oxidoreductase HF896_15045 PF03631 Virulence factor BrkB HF896_15055 PF02913 FAD linked oxidases, C-terminal domain HF896_15055 PF01565 FAD binding domain HF896_15060 PF00303 Thymidylate synthase HF896_15065 PF00186 Dihydrofolate reductase HF896_15075 PF00691 OmpA family HF896_15075 PF13677 Membrane MotB of proton-channel complex MotA/MotB HF896_15095 PF00072 Response regulator receiver domain HF896_15095 PF00486 Transcriptional regulatory protein, C terminal HF896_15100 PF13492 GAF domain HF896_15100 PF13493 Domain of unknown function (DUF4118) HF896_15100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_15100 PF00512 His Kinase A (phospho-acceptor) domain HF896_15100 PF02702 Osmosensitive K+ channel His kinase sensor domain HF896_15105 PF02669 K+-transporting ATPase, c chain HF896_15115 PF03814 Potassium-transporting ATPase A subunit HF896_15125 PF03372 Endonuclease/Exonuclease/phosphatase family HF896_15130 PF00072 Response regulator receiver domain HF896_15130 PF00158 Sigma-54 interaction domain HF896_15130 PF02954 Bacterial regulatory protein, Fis family HF896_15135 PF00512 His Kinase A (phospho-acceptor) domain HF896_15135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_15135 PF00989 PAS fold HF896_15145 PF00120 Glutamine synthetase, catalytic domain HF896_15145 PF03951 Glutamine synthetase, beta-Grasp domain HF896_15175 PF01479 S4 domain HF896_15175 PF00849 RNA pseudouridylate synthase HF896_15210 PF00709 Adenylosuccinate synthetase HF896_15215 PF13393 Histidyl-tRNA synthetase HF896_15225 PF01145 SPFH domain / Band 7 family HF896_15230 PF12221 Bacterial membrane protein N terminal HF896_15230 PF01145 SPFH domain / Band 7 family HF896_15235 PF16360 GTP-binding GTPase Middle Region HF896_15235 PF13167 GTP-binding GTPase N-terminal HF896_15235 PF01926 50S ribosome-binding GTPase HF896_15240 PF17209 Hfq protein HF896_15245 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HF896_15245 PF01926 50S ribosome-binding GTPase HF896_15250 PF13360 PQQ-like domain HF896_15260 PF03129 Anticodon binding domain HF896_15260 PF13393 Histidyl-tRNA synthetase HF896_15265 PF04551 GcpE protein HF896_15280 PF04055 Radical SAM superfamily HF896_15285 PF00334 Nucleoside diphosphate kinase HF896_15290 PF00849 RNA pseudouridylate synthase HF896_15290 PF01479 S4 domain HF896_15295 PF04079 Segregation and condensation complex subunit ScpB HF896_15300 PF00849 RNA pseudouridylate synthase HF896_15300 PF01479 S4 domain HF896_15305 PF01551 Peptidase family M23 HF896_15305 PF01476 LysM domain HF896_15315 PF01975 Survival protein SurE HF896_15320 PF00990 Diguanylate cyclase, GGDEF domain HF896_15320 PF00072 Response regulator receiver domain HF896_15325 PF09423 PhoD-like phosphatase HF896_15325 PF16655 PhoD-like phosphatase, N-terminal domain HF896_15335 PF01070 FMN-dependent dehydrogenase HF896_15340 PF03401 Tripartite tricarboxylate transporter family receptor HF896_15365 PF01557 Fumarylacetoacetate (FAA) hydrolase family HF896_15390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_15390 PF00512 His Kinase A (phospho-acceptor) domain HF896_15395 PF00145 C-5 cytosine-specific DNA methylase HF896_15400 PF03852 DNA mismatch endonuclease Vsr HF896_15415 PF03743 Bacterial conjugation TrbI-like protein HF896_15430 PF04610 TrbL/VirB6 plasmid conjugal transfer protein HF896_15445 PF03135 CagE, TrbE, VirB family, component of type IV transporter system HF896_15460 PF00437 Type II/IV secretion system protein HF896_15475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_15475 PF03466 LysR substrate binding domain HF896_15485 PF01042 Endoribonuclease L-PSP HF896_15490 PF07992 Pyridine nucleotide-disulphide oxidoreductase HF896_15490 PF04324 BFD-like [2Fe-2S] binding domain HF896_15500 PF01266 FAD dependent oxidoreductase HF896_15505 PF03401 Tripartite tricarboxylate transporter family receptor HF896_15510 PF03466 LysR substrate binding domain HF896_15510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_15520 PF10502 Signal peptidase, peptidase S26 HF896_15535 PF13614 AAA domain HF896_15560 PF01381 Helix-turn-helix HF896_15570 PF05284 Protein of unknown function (DUF736) HF896_15580 PF17762 HTH domain found in ParB protein HF896_15580 PF02195 ParB-like nuclease domain HF896_15585 PF06067 Domain of unknown function (DUF932) HF896_15620 PF00589 Phage integrase family HF896_15620 PF12167 Arm DNA-binding domain HF896_15625 PF00488 MutS domain V HF896_15625 PF05192 MutS domain III HF896_15625 PF05190 MutS family domain IV HF896_15625 PF05188 MutS domain II HF896_15625 PF01624 MutS domain I HF896_15630 PF02321 Outer membrane efflux protein HF896_15635 PF00873 AcrB/AcrD/AcrF family HF896_15640 PF00873 AcrB/AcrD/AcrF family HF896_15645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF896_15655 PF02673 Bacitracin resistance protein BacA HF896_15670 PF06580 Histidine kinase HF896_15670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_15675 PF00072 Response regulator receiver domain HF896_15675 PF04397 LytTr DNA-binding domain HF896_15680 PF07690 Major Facilitator Superfamily HF896_15690 PF01494 FAD binding domain HF896_15695 PF00330 Aconitase family (aconitate hydratase) HF896_15695 PF00694 Aconitase C-terminal domain HF896_15700 PF00816 H-NS histone family HF896_15705 PF00149 Calcineurin-like phosphoesterase HF896_15715 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HF896_15725 PF18764 Nitrous oxide reductase propeller repeat HF896_15725 PF18793 Nitrous oxide reductase propeller repeat 2 HF896_15725 PF13473 Cupredoxin-like domain HF896_15730 PF12801 4Fe-4S binding domain HF896_15730 PF04205 FMN-binding domain HF896_15735 PF05048 Periplasmic copper-binding protein (NosD) HF896_15740 PF00005 ABC transporter HF896_15745 PF12679 ABC-2 family transporter protein HF896_15760 PF00270 DEAD/DEAH box helicase HF896_15760 PF00271 Helicase conserved C-terminal domain HF896_15765 PF04228 Putative neutral zinc metallopeptidase HF896_15770 PF00692 dUTPase HF896_15790 PF00576 HIUase/Transthyretin family HF896_15810 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HF896_15810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HF896_15815 PF01261 Xylose isomerase-like TIM barrel HF896_15820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF896_15820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HF896_15820 PF00205 Thiamine pyrophosphate enzyme, central domain HF896_15825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_15825 PF03466 LysR substrate binding domain HF896_15830 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF896_15835 PF00202 Aminotransferase class-III HF896_15845 PF05161 MOFRL family HF896_15845 PF13660 Domain of unknown function (DUF4147) HF896_15850 PF03401 Tripartite tricarboxylate transporter family receptor HF896_15855 PF00180 Isocitrate/isopropylmalate dehydrogenase HF896_15860 PF03466 LysR substrate binding domain HF896_15860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_15865 PF00392 Bacterial regulatory proteins, gntR family HF896_15865 PF07729 FCD domain HF896_15875 PF07687 Peptidase dimerisation domain HF896_15875 PF01546 Peptidase family M20/M25/M40 HF896_15880 PF07687 Peptidase dimerisation domain HF896_15880 PF01546 Peptidase family M20/M25/M40 HF896_15885 PF03707 Bacterial signalling protein N terminal repeat HF896_15885 PF00563 EAL domain HF896_15885 PF00990 Diguanylate cyclase, GGDEF domain HF896_15895 PF00672 HAMP domain HF896_15895 PF02203 Tar ligand binding domain homologue HF896_15895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF896_15900 PF00860 Permease family HF896_15905 PF01515 Phosphate acetyl/butaryl transferase HF896_15905 PF03949 Malic enzyme, NAD binding domain HF896_15905 PF00390 Malic enzyme, N-terminal domain HF896_15930 PF00578 AhpC/TSA family HF896_15935 PF13638 PIN domain HF896_15935 PF02562 PhoH-like protein HF896_15940 PF00171 Aldehyde dehydrogenase family HF896_15945 PF00772 DnaB-like helicase N terminal domain HF896_15945 PF03796 DnaB-like helicase C terminal domain HF896_15950 PF01281 Ribosomal protein L9, N-terminal domain HF896_15950 PF03948 Ribosomal protein L9, C-terminal domain HF896_15955 PF01084 Ribosomal protein S18 HF896_15965 PF01250 Ribosomal protein S6 HF896_15970 PF01025 GrpE HF896_15975 PF00012 Hsp70 protein HF896_15980 PF00226 DnaJ domain HF896_15980 PF00684 DnaJ central domain HF896_15980 PF01556 DnaJ C terminal domain HF896_15990 PF01212 Beta-eliminating lyase HF896_15995 PF01136 Peptidase family U32 HF896_16000 PF01136 Peptidase family U32 HF896_16005 PF02036 SCP-2 sterol transfer family HF896_16010 PF08859 DGC domain HF896_16015 PF02441 Flavoprotein HF896_16020 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HF896_16025 PF00067 Cytochrome P450 HF896_16030 PF10996 Beta-Casp domain HF896_16030 PF00753 Metallo-beta-lactamase superfamily HF896_16030 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HF896_16040 PF00330 Aconitase family (aconitate hydratase) HF896_16045 PF08085 Entericidin EcnA/B family HF896_16050 PF00694 Aconitase C-terminal domain HF896_16055 PF00180 Isocitrate/isopropylmalate dehydrogenase HF896_16060 PF02774 Semialdehyde dehydrogenase, dimerisation domain HF896_16060 PF01118 Semialdehyde dehydrogenase, NAD binding domain HF896_16070 PF01416 tRNA pseudouridine synthase HF896_16075 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HF896_16080 PF00291 Pyridoxal-phosphate dependent enzyme HF896_16085 PF00290 Tryptophan synthase alpha chain HF896_16090 PF01039 Carboxyl transferase domain HF896_16090 PF17848 Acetyl-coA carboxylase zinc finger domain HF896_16095 PF02325 YGGT family HF896_16105 PF02719 Polysaccharide biosynthesis protein HF896_16115 PF00132 Bacterial transferase hexapeptide (six repeats) HF896_16120 PF13439 Glycosyltransferase Family 4 HF896_16130 PF08003 Protein of unknown function (DUF1698) HF896_16135 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HF896_16140 PF02397 Bacterial sugar transferase HF896_16145 PF00152 tRNA synthetases class II (D, K and N) HF896_16145 PF01336 OB-fold nucleic acid binding domain HF896_16155 PF13458 Periplasmic binding protein HF896_16160 PF02653 Branched-chain amino acid transport system / permease component HF896_16165 PF02653 Branched-chain amino acid transport system / permease component HF896_16165 PF11862 Domain of unknown function (DUF3382) HF896_16170 PF00005 ABC transporter HF896_16170 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_16175 PF00005 ABC transporter HF896_16180 PF00365 Phosphofructokinase HF896_16185 PF00933 Glycosyl hydrolase family 3 N terminal domain HF896_16190 PF01648 4'-phosphopantetheinyl transferase superfamily HF896_16195 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HF896_16200 PF02565 Recombination protein O C terminal HF896_16200 PF11967 Recombination protein O N terminal HF896_16205 PF07650 KH domain HF896_16205 PF01926 50S ribosome-binding GTPase HF896_16210 PF14622 Ribonuclease-III-like HF896_16210 PF00035 Double-stranded RNA binding motif HF896_16220 PF10502 Signal peptidase, peptidase S26 HF896_16225 PF06421 GTP-binding protein LepA C-terminus HF896_16225 PF03144 Elongation factor Tu domain 2 HF896_16225 PF00009 Elongation factor Tu GTP binding domain HF896_16225 PF00679 Elongation factor G C-terminus HF896_16230 PF13180 PDZ domain HF896_16245 PF04542 Sigma-70 region 2 HF896_16245 PF08281 Sigma-70, region 4 HF896_16255 PF02801 Beta-ketoacyl synthase, C-terminal domain HF896_16255 PF00109 Beta-ketoacyl synthase, N-terminal domain HF896_16260 PF00550 Phosphopantetheine attachment site HF896_16270 PF00698 Acyl transferase domain HF896_16275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HF896_16275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HF896_16280 PF02504 Fatty acid synthesis protein HF896_16285 PF01783 Ribosomal L32p protein family HF896_16290 PF02620 Large ribosomal RNA subunit accumulation protein YceD HF896_16295 PF02545 Maf-like protein HF896_16300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HF896_16305 PF01343 Peptidase family S49 HF896_16305 PF06965 Na+/H+ antiporter 1 HF896_16315 PF13419 Haloacid dehalogenase-like hydrolase HF896_16320 PF01479 S4 domain HF896_16320 PF00849 RNA pseudouridylate synthase HF896_16325 PF10150 Ribonuclease E/G family HF896_16325 PF00575 S1 RNA binding domain HF896_16325 PF12111 Polyribonucleotide phosphorylase C terminal HF896_16330 PF03883 Peroxide stress protein YaaA HF896_16340 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HF896_16340 PF14489 QueF-like protein HF896_16345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF896_16345 PF08447 PAS fold HF896_16350 PF11799 impB/mucB/samB family C-terminal domain HF896_16350 PF00817 impB/mucB/samB family HF896_16355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_16355 PF03466 LysR substrate binding domain HF896_16360 PF03401 Tripartite tricarboxylate transporter family receptor HF896_16365 PF02515 CoA-transferase family III HF896_16370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_16370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_16370 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_16380 PF01070 FMN-dependent dehydrogenase HF896_16385 PF00691 OmpA family HF896_16390 PF13188 PAS domain HF896_16390 PF00990 Diguanylate cyclase, GGDEF domain HF896_16390 PF00563 EAL domain HF896_16390 PF03707 Bacterial signalling protein N terminal repeat HF896_16395 PF13689 YfiR/HmsC-like HF896_16400 PF14814 Bifunctional transglycosylase second domain HF896_16400 PF00912 Transglycosylase HF896_16400 PF00905 Penicillin binding protein transpeptidase domain HF896_16405 PF02142 MGS-like domain HF896_16410 PF02515 CoA-transferase family III HF896_16415 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_16415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_16415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_16420 PF13607 Succinyl-CoA ligase like flavodoxin domain HF896_16420 PF13380 CoA binding domain HF896_16425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_16425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_16425 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_16430 PF17763 Glutaminase/Asparaginase C-terminal domain HF896_16430 PF00710 Asparaginase, N-terminal HF896_16435 PF03401 Tripartite tricarboxylate transporter family receptor HF896_16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_16440 PF03466 LysR substrate binding domain HF896_16445 PF00149 Calcineurin-like phosphoesterase HF896_16455 PF03401 Tripartite tricarboxylate transporter family receptor HF896_16460 PF14698 Argininosuccinate lyase C-terminal HF896_16460 PF00206 Lyase HF896_16465 PF07694 5TMR of 5TMR-LYT HF896_16465 PF06580 Histidine kinase HF896_16470 PF03180 NLPA lipoprotein HF896_16475 PF04293 SpoVR like protein HF896_16480 PF04285 Protein of unknown function (DUF444) HF896_16485 PF06798 PrkA serine protein kinase C-terminal domain HF896_16485 PF08298 PrkA AAA domain HF896_16490 PF02082 Transcriptional regulator HF896_16495 PF04405 Domain of Unknown function (DUF542) HF896_16495 PF01814 Hemerythrin HHE cation binding domain HF896_16500 PF01152 Bacterial-like globin HF896_16515 PF00248 Aldo/keto reductase family HF896_16520 PF04102 SlyX HF896_16525 PF00155 Aminotransferase class I and II HF896_16535 PF03401 Tripartite tricarboxylate transporter family receptor HF896_16540 PF01425 Amidase HF896_16545 PF03466 LysR substrate binding domain HF896_16545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_16550 PF00730 HhH-GPD superfamily base excision DNA repair protein HF896_16550 PF10576 Iron-sulfur binding domain of endonuclease III HF896_16550 PF00633 Helix-hairpin-helix motif HF896_16560 PF02277 Phosphoribosyltransferase HF896_16565 PF07685 CobB/CobQ-like glutamine amidotransferase domain HF896_16565 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HF896_16575 PF03186 CobD/Cbib protein HF896_16580 PF07963 Prokaryotic N-terminal methylation motif HF896_16580 PF00114 Pilin (bacterial filament) HF896_16600 PF05567 Neisseria PilC beta-propeller domain HF896_16605 PF00114 Pilin (bacterial filament) HF896_16605 PF07963 Prokaryotic N-terminal methylation motif HF896_16610 PF01872 RibD C-terminal domain HF896_16610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HF896_16615 PF13091 PLD-like domain HF896_16620 PF01207 Dihydrouridine synthase (Dus) HF896_16625 PF05175 Methyltransferase small domain HF896_16635 PF00171 Aldehyde dehydrogenase family HF896_16645 PF00004 ATPase family associated with various cellular activities (AAA) HF896_16645 PF07724 AAA domain (Cdc48 subfamily) HF896_16645 PF02861 Clp amino terminal domain, pathogenicity island component HF896_16645 PF10431 C-terminal, D2-small domain, of ClpB protein HF896_16645 PF17871 AAA lid domain HF896_16650 PF02391 MoaE protein HF896_16670 PF00701 Dihydrodipicolinate synthetase family HF896_16680 PF03453 MoeA N-terminal region (domain I and II) HF896_16680 PF00994 Probable molybdopterin binding domain HF896_16680 PF03454 MoeA C-terminal region (domain IV) HF896_16685 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HF896_16690 PF00291 Pyridoxal-phosphate dependent enzyme HF896_16690 PF14821 Threonine synthase N terminus HF896_16695 PF01850 PIN domain HF896_16705 PF00742 Homoserine dehydrogenase HF896_16705 PF03447 Homoserine dehydrogenase, NAD binding domain HF896_16705 PF01842 ACT domain HF896_16710 PF00155 Aminotransferase class I and II HF896_16715 PF04430 Protein of unknown function (DUF498/DUF598) HF896_16725 PF03401 Tripartite tricarboxylate transporter family receptor HF896_16730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_16730 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_16730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_16735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_16735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_16735 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_16740 PF00766 Electron transfer flavoprotein FAD-binding domain HF896_16740 PF01012 Electron transfer flavoprotein domain HF896_16745 PF01012 Electron transfer flavoprotein domain HF896_16750 PF03401 Tripartite tricarboxylate transporter family receptor HF896_16755 PF02803 Thiolase, C-terminal domain HF896_16755 PF00108 Thiolase, N-terminal domain HF896_16765 PF00108 Thiolase, N-terminal domain HF896_16765 PF02803 Thiolase, C-terminal domain HF896_16770 PF00378 Enoyl-CoA hydratase/isomerase HF896_16775 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_16775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_16775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_16780 PF13380 CoA binding domain HF896_16780 PF13607 Succinyl-CoA ligase like flavodoxin domain HF896_16795 PF00378 Enoyl-CoA hydratase/isomerase HF896_16800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HF896_16800 PF00378 Enoyl-CoA hydratase/isomerase HF896_16800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HF896_16815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_16815 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_16815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_16820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_16820 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_16820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_16825 PF00378 Enoyl-CoA hydratase/isomerase HF896_16830 PF13577 SnoaL-like domain HF896_16835 PF03401 Tripartite tricarboxylate transporter family receptor HF896_16845 PF02515 CoA-transferase family III HF896_16860 PF02515 CoA-transferase family III HF896_16865 PF03401 Tripartite tricarboxylate transporter family receptor HF896_16870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HF896_16875 PF08241 Methyltransferase domain HF896_16880 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HF896_16880 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HF896_16885 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HF896_16890 PF00005 ABC transporter HF896_16895 PF01032 FecCD transport family HF896_16905 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HF896_16910 PF07685 CobB/CobQ-like glutamine amidotransferase domain HF896_16910 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HF896_16915 PF07715 TonB-dependent Receptor Plug Domain HF896_16915 PF00593 TonB dependent receptor HF896_16930 PF00563 EAL domain HF896_16930 PF00990 Diguanylate cyclase, GGDEF domain HF896_16930 PF03707 Bacterial signalling protein N terminal repeat HF896_16945 PF04055 Radical SAM superfamily HF896_16945 PF06969 HemN C-terminal domain HF896_16950 PF13545 Crp-like helix-turn-helix domain HF896_16950 PF00027 Cyclic nucleotide-binding domain HF896_16965 PF12801 4Fe-4S binding domain HF896_16965 PF13746 4Fe-4S dicluster domain HF896_16965 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HF896_16970 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HF896_16970 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HF896_16985 PF00115 Cytochrome C and Quinol oxidase polypeptide I HF896_17005 PF13193 AMP-binding enzyme C-terminal domain HF896_17005 PF00501 AMP-binding enzyme HF896_17010 PF00378 Enoyl-CoA hydratase/isomerase HF896_17015 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17025 PF07729 FCD domain HF896_17025 PF00392 Bacterial regulatory proteins, gntR family HF896_17030 PF01790 Prolipoprotein diacylglyceryl transferase HF896_17035 PF00210 Ferritin-like domain HF896_17045 PF00920 Dehydratase family HF896_17050 PF00920 Dehydratase family HF896_17060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HF896_17065 PF00005 ABC transporter HF896_17070 PF12704 MacB-like periplasmic core domain HF896_17070 PF02687 FtsX-like permease family HF896_17080 PF01368 DHH family HF896_17080 PF17768 RecJ OB domain HF896_17080 PF02272 DHHA1 domain HF896_17085 PF00672 HAMP domain HF896_17085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF896_17085 PF02203 Tar ligand binding domain homologue HF896_17090 PF02811 PHP domain HF896_17095 PF01300 Telomere recombination HF896_17100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF896_17100 PF02203 Tar ligand binding domain homologue HF896_17100 PF00672 HAMP domain HF896_17105 PF02163 Peptidase family M50 HF896_17110 PF00579 tRNA synthetases class I (W and Y) HF896_17115 PF00486 Transcriptional regulatory protein, C terminal HF896_17115 PF00072 Response regulator receiver domain HF896_17125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_17125 PF00512 His Kinase A (phospho-acceptor) domain HF896_17130 PF02397 Bacterial sugar transferase HF896_17145 PF01062 Bestrophin, RFP-TM, chloride channel HF896_17150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HF896_17150 PF02403 Seryl-tRNA synthetase N-terminal domain HF896_17160 PF03471 Transporter associated domain HF896_17160 PF01595 Cyclin M transmembrane N-terminal domain HF896_17160 PF00571 CBS domain HF896_17165 PF02401 LytB protein HF896_17170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HF896_17175 PF04002 RadC-like JAB domain HF896_17185 PF00488 MutS domain V HF896_17185 PF01713 Smr domain HF896_17190 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17195 PF00330 Aconitase family (aconitate hydratase) HF896_17200 PF00694 Aconitase C-terminal domain HF896_17210 PF03354 Phage Terminase HF896_17215 PF01152 Bacterial-like globin HF896_17240 PF02634 FdhD/NarQ family HF896_17260 PF13247 4Fe-4S dicluster domain HF896_17265 PF01568 Molydopterin dinucleotide binding domain HF896_17265 PF00384 Molybdopterin oxidoreductase HF896_17265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HF896_17295 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HF896_17295 PF00384 Molybdopterin oxidoreductase HF896_17295 PF12838 4Fe-4S dicluster domain HF896_17295 PF01568 Molydopterin dinucleotide binding domain HF896_17295 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HF896_17300 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HF896_17300 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HF896_17300 PF10531 SLBB domain HF896_17305 PF03328 HpcH/HpaI aldolase/citrate lyase family HF896_17315 PF00392 Bacterial regulatory proteins, gntR family HF896_17315 PF07729 FCD domain HF896_17320 PF02515 CoA-transferase family III HF896_17325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_17325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_17325 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_17335 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17345 PF10609 NUBPL iron-transfer P-loop NTPase HF896_17350 PF03595 Voltage-dependent anion channel HF896_17355 PF02769 AIR synthase related protein, C-terminal domain HF896_17355 PF00586 AIR synthase related protein, N-terminal domain HF896_17360 PF00581 Rhodanese-like domain HF896_17375 PF09334 tRNA synthetases class I (M) HF896_17375 PF01588 Putative tRNA binding domain HF896_17385 PF00392 Bacterial regulatory proteins, gntR family HF896_17385 PF00155 Aminotransferase class I and II HF896_17390 PF03594 Benzoate membrane transport protein HF896_17395 PF01168 Alanine racemase, N-terminal domain HF896_17400 PF00117 Glutamine amidotransferase class-I HF896_17405 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HF896_17405 PF12833 Helix-turn-helix domain HF896_17410 PF00890 FAD binding domain HF896_17415 PF01070 FMN-dependent dehydrogenase HF896_17420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF896_17420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HF896_17435 PF02616 Segregation and condensation protein ScpA HF896_17450 PF02910 Fumarate reductase flavoprotein C-term HF896_17450 PF00890 FAD binding domain HF896_17460 PF04715 Anthranilate synthase component I, N terminal region HF896_17460 PF00425 chorismate binding enzyme HF896_17465 PF02445 Quinolinate synthetase A protein HF896_17470 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HF896_17470 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HF896_17475 PF02548 Ketopantoate hydroxymethyltransferase HF896_17480 PF02569 Pantoate-beta-alanine ligase HF896_17485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_17485 PF03466 LysR substrate binding domain HF896_17490 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17495 PF07171 MlrC C-terminus HF896_17495 PF07364 Metallopeptidase family M81 HF896_17500 PF01925 Sulfite exporter TauE/SafE HF896_17505 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17515 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HF896_17515 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HF896_17520 PF02556 Preprotein translocase subunit SecB HF896_17525 PF00462 Glutaredoxin HF896_17530 PF00581 Rhodanese-like domain HF896_17535 PF00300 Histidine phosphatase superfamily (branch 1) HF896_17540 PF03572 Peptidase family S41 HF896_17540 PF13180 PDZ domain HF896_17545 PF00899 ThiF family HF896_17555 PF00072 Response regulator receiver domain HF896_17555 PF00196 Bacterial regulatory proteins, luxR family HF896_17560 PF17200 Single Cache domain 2 HF896_17560 PF07730 Histidine kinase HF896_17565 PF07043 Protein of unknown function (DUF1328) HF896_17575 PF04972 BON domain HF896_17580 PF01467 Cytidylyltransferase-like HF896_17590 PF05193 Peptidase M16 inactive domain HF896_17595 PF05193 Peptidase M16 inactive domain HF896_17595 PF00675 Insulinase (Peptidase family M16) HF896_17600 PF00448 SRP54-type protein, GTPase domain HF896_17600 PF02881 SRP54-type protein, helical bundle domain HF896_17605 PF03466 LysR substrate binding domain HF896_17605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_17610 PF00701 Dihydrodipicolinate synthetase family HF896_17615 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17625 PF13378 Enolase C-terminal domain-like HF896_17635 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17640 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17645 PF00330 Aconitase family (aconitate hydratase) HF896_17645 PF00694 Aconitase C-terminal domain HF896_17655 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF896_17655 PF01464 Transglycosylase SLT domain HF896_17660 PF10282 Lactonase, 7-bladed beta-propeller HF896_17665 PF00107 Zinc-binding dehydrogenase HF896_17665 PF08240 Alcohol dehydrogenase GroES-like domain HF896_17680 PF00486 Transcriptional regulatory protein, C terminal HF896_17680 PF00072 Response regulator receiver domain HF896_17685 PF08521 Two-component sensor kinase N-terminal HF896_17685 PF00512 His Kinase A (phospho-acceptor) domain HF896_17685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_17715 PF00873 AcrB/AcrD/AcrF family HF896_17735 PF04545 Sigma-70, region 4 HF896_17735 PF04542 Sigma-70 region 2 HF896_17735 PF00140 Sigma-70 factor, region 1.2 HF896_17740 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17745 PF02630 SCO1/SenC HF896_17750 PF01040 UbiA prenyltransferase family HF896_17775 PF00510 Cytochrome c oxidase subunit III HF896_17785 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 HF896_17790 PF00115 Cytochrome C and Quinol oxidase polypeptide I HF896_17795 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HF896_17795 PF02790 Cytochrome C oxidase subunit II, transmembrane domain HF896_17800 PF08241 Methyltransferase domain HF896_17810 PF00588 SpoU rRNA Methylase family HF896_17815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_17815 PF03466 LysR substrate binding domain HF896_17825 PF07015 VirC1 protein HF896_17830 PF01810 LysE type translocator HF896_17835 PF02254 TrkA-N domain HF896_17835 PF00999 Sodium/hydrogen exchanger family HF896_17840 PF07702 UTRA domain HF896_17840 PF00392 Bacterial regulatory proteins, gntR family HF896_17850 PF00330 Aconitase family (aconitate hydratase) HF896_17855 PF00694 Aconitase C-terminal domain HF896_17860 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17865 PF04303 PrpF protein HF896_17875 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17880 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17885 PF07687 Peptidase dimerisation domain HF896_17885 PF01546 Peptidase family M20/M25/M40 HF896_17890 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_17895 PF03466 LysR substrate binding domain HF896_17905 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17910 PF00106 short chain dehydrogenase HF896_17915 PF02803 Thiolase, C-terminal domain HF896_17915 PF00108 Thiolase, N-terminal domain HF896_17920 PF01144 Coenzyme A transferase HF896_17925 PF01144 Coenzyme A transferase HF896_17930 PF09339 IclR helix-turn-helix domain HF896_17930 PF01614 Bacterial transcriptional regulator HF896_17945 PF00034 Cytochrome c HF896_17950 PF06689 ClpX C4-type zinc finger HF896_17950 PF10431 C-terminal, D2-small domain, of ClpB protein HF896_17950 PF07724 AAA domain (Cdc48 subfamily) HF896_17960 PF03401 Tripartite tricarboxylate transporter family receptor HF896_17965 PF00392 Bacterial regulatory proteins, gntR family HF896_17970 PF02515 CoA-transferase family III HF896_17975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_17975 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_17975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_17980 PF00378 Enoyl-CoA hydratase/isomerase HF896_18000 PF04357 TamB, inner membrane protein subunit of TAM complex HF896_18020 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HF896_18020 PF09125 Cytochrome C oxidase subunit II, transmembrane HF896_18025 PF00115 Cytochrome C and Quinol oxidase polypeptide I HF896_18030 PF01040 UbiA prenyltransferase family HF896_18050 PF00115 Cytochrome C and Quinol oxidase polypeptide I HF896_18055 PF00175 Oxidoreductase NAD-binding domain HF896_18055 PF00970 Oxidoreductase FAD-binding domain HF896_18055 PF00111 2Fe-2S iron-sulfur cluster binding domain HF896_18060 PF13091 PLD-like domain HF896_18060 PF13396 Phospholipase_D-nuclease N-terminal HF896_18065 PF00512 His Kinase A (phospho-acceptor) domain HF896_18065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_18065 PF08521 Two-component sensor kinase N-terminal HF896_18070 PF00486 Transcriptional regulatory protein, C terminal HF896_18070 PF00072 Response regulator receiver domain HF896_18075 PF13180 PDZ domain HF896_18080 PF03960 ArsC family HF896_18085 PF00528 Binding-protein-dependent transport system inner membrane component HF896_18090 PF00005 ABC transporter HF896_18090 PF08402 TOBE domain HF896_18095 PF01553 Acyltransferase HF896_18100 PF01979 Amidohydrolase family HF896_18105 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HF896_18105 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HF896_18110 PF00156 Phosphoribosyl transferase domain HF896_18115 PF03652 Holliday junction resolvase HF896_18120 PF02622 Uncharacterized ACR, COG1678 HF896_18125 PF02895 Signal transducing histidine kinase, homodimeric domain HF896_18125 PF01584 CheW-like domain HF896_18125 PF00072 Response regulator receiver domain HF896_18125 PF01627 Hpt domain HF896_18125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_18130 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HF896_18130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF896_18140 PF00072 Response regulator receiver domain HF896_18145 PF00072 Response regulator receiver domain HF896_18150 PF00301 Rubredoxin HF896_18160 PF00202 Aminotransferase class-III HF896_18165 PF02142 MGS-like domain HF896_18165 PF01808 AICARFT/IMPCHase bienzyme HF896_18170 PF02954 Bacterial regulatory protein, Fis family HF896_18175 PF01207 Dihydrouridine synthase (Dus) HF896_18180 PF09335 SNARE associated Golgi protein HF896_18185 PF03466 LysR substrate binding domain HF896_18185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_18190 PF03401 Tripartite tricarboxylate transporter family receptor HF896_18195 PF01546 Peptidase family M20/M25/M40 HF896_18200 PF01970 Tripartite tricarboxylate transporter TctA family HF896_18205 PF07331 Tripartite tricarboxylate transporter TctB family HF896_18210 PF00672 HAMP domain HF896_18210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_18210 PF00512 His Kinase A (phospho-acceptor) domain HF896_18215 PF00072 Response regulator receiver domain HF896_18215 PF00486 Transcriptional regulatory protein, C terminal HF896_18220 PF06071 Protein of unknown function (DUF933) HF896_18220 PF01926 50S ribosome-binding GTPase HF896_18225 PF01494 FAD binding domain HF896_18230 PF10411 Disulfide bond isomerase protein N-terminus HF896_18230 PF13098 Thioredoxin-like domain HF896_18240 PF00378 Enoyl-CoA hydratase/isomerase HF896_18255 PF00919 Uncharacterized protein family UPF0004 HF896_18255 PF01938 TRAM domain HF896_18255 PF04055 Radical SAM superfamily HF896_18260 PF02881 SRP54-type protein, helical bundle domain HF896_18260 PF02978 Signal peptide binding domain HF896_18260 PF00448 SRP54-type protein, GTPase domain HF896_18265 PF01578 Cytochrome C assembly protein HF896_18275 PF00512 His Kinase A (phospho-acceptor) domain HF896_18275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_18280 PF00158 Sigma-54 interaction domain HF896_18280 PF02954 Bacterial regulatory protein, Fis family HF896_18280 PF00072 Response regulator receiver domain HF896_18285 PF01510 N-acetylmuramoyl-L-alanine amidase HF896_18290 PF03477 ATP cone domain HF896_18290 PF02867 Ribonucleotide reductase, barrel domain HF896_18290 PF00317 Ribonucleotide reductase, all-alpha domain HF896_18295 PF00268 Ribonucleotide reductase, small chain HF896_18320 PF00289 Biotin carboxylase, N-terminal domain HF896_18320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HF896_18320 PF02785 Biotin carboxylase C-terminal domain HF896_18325 PF00364 Biotin-requiring enzyme HF896_18330 PF00578 AhpC/TSA family HF896_18340 PF08245 Mur ligase middle domain HF896_18340 PF02875 Mur ligase family, glutamate ligase domain HF896_18340 PF01225 Mur ligase family, catalytic domain HF896_18350 PF00793 DAHP synthetase I family HF896_18355 PF01523 Putative modulator of DNA gyrase HF896_18360 PF01098 Cell cycle protein HF896_18365 PF05728 Uncharacterised protein family (UPF0227) HF896_18375 PF00034 Cytochrome c HF896_18385 PF04542 Sigma-70 region 2 HF896_18385 PF08281 Sigma-70, region 4 HF896_18390 PF00773 RNB domain HF896_18400 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HF896_18400 PF01488 Shikimate / quinate 5-dehydrogenase HF896_18400 PF08501 Shikimate dehydrogenase substrate binding domain HF896_18405 PF00912 Transglycosylase HF896_18420 PF02075 Crossover junction endodeoxyribonuclease RuvC HF896_18430 PF08241 Methyltransferase domain HF896_18435 PF01964 Radical SAM ThiC family HF896_18435 PF13667 ThiC-associated domain HF896_18445 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HF896_18460 PF13193 AMP-binding enzyme C-terminal domain HF896_18460 PF00501 AMP-binding enzyme HF896_18475 PF03401 Tripartite tricarboxylate transporter family receptor HF896_18480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_18480 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_18480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_18485 PF12327 FtsZ family, C-terminal domain HF896_18485 PF00091 Tubulin/FtsZ family, GTPase domain HF896_18490 PF02491 SHS2 domain inserted in FTSA HF896_18495 PF08478 POTRA domain, FtsQ-type HF896_18495 PF03799 Cell division protein FtsQ HF896_18500 PF07478 D-ala D-ala ligase C-terminus HF896_18500 PF01820 D-ala D-ala ligase N-terminus HF896_18505 PF01225 Mur ligase family, catalytic domain HF896_18505 PF08245 Mur ligase middle domain HF896_18505 PF02875 Mur ligase family, glutamate ligase domain HF896_18510 PF03033 Glycosyltransferase family 28 N-terminal domain HF896_18510 PF04101 Glycosyltransferase family 28 C-terminal domain HF896_18515 PF01098 Cell cycle protein HF896_18520 PF02875 Mur ligase family, glutamate ligase domain HF896_18520 PF08245 Mur ligase middle domain HF896_18525 PF00953 Glycosyl transferase family 4 HF896_18525 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HF896_18530 PF02875 Mur ligase family, glutamate ligase domain HF896_18530 PF08245 Mur ligase middle domain HF896_18530 PF01225 Mur ligase family, catalytic domain HF896_18535 PF08245 Mur ligase middle domain HF896_18535 PF02875 Mur ligase family, glutamate ligase domain HF896_18540 PF00905 Penicillin binding protein transpeptidase domain HF896_18540 PF03717 Penicillin-binding Protein dimerisation domain HF896_18550 PF01795 MraW methylase family HF896_18555 PF02381 MraZ protein, putative antitoxin-like HF896_18560 PF07724 AAA domain (Cdc48 subfamily) HF896_18560 PF00004 ATPase family associated with various cellular activities (AAA) HF896_18565 PF00227 Proteasome subunit HF896_18575 PF01258 Prokaryotic dksA/traR C4-type zinc finger HF896_18580 PF07683 Cobalamin synthesis protein cobW C-terminal domain HF896_18580 PF02492 CobW/HypB/UreG, nucleotide-binding domain HF896_18590 PF00158 Sigma-54 interaction domain HF896_18590 PF02954 Bacterial regulatory protein, Fis family HF896_18590 PF00072 Response regulator receiver domain HF896_18595 PF01339 CheB methylesterase HF896_18595 PF00072 Response regulator receiver domain HF896_18600 PF00486 Transcriptional regulatory protein, C terminal HF896_18600 PF00072 Response regulator receiver domain HF896_18605 PF00512 His Kinase A (phospho-acceptor) domain HF896_18605 PF00989 PAS fold HF896_18605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_18610 PF01339 CheB methylesterase HF896_18610 PF00072 Response regulator receiver domain HF896_18615 PF00486 Transcriptional regulatory protein, C terminal HF896_18615 PF00072 Response regulator receiver domain HF896_18620 PF11849 Domain of unknown function (DUF3369) HF896_18630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HF896_18630 PF00072 Response regulator receiver domain HF896_18630 PF00672 HAMP domain HF896_18630 PF01627 Hpt domain HF896_18630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_18630 PF00512 His Kinase A (phospho-acceptor) domain HF896_18635 PF02203 Tar ligand binding domain homologue HF896_18635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF896_18635 PF00672 HAMP domain HF896_18640 PF00589 Phage integrase family HF896_18640 PF02899 Phage integrase, N-terminal SAM-like domain HF896_18650 PF01678 Diaminopimelate epimerase HF896_18660 PF01479 S4 domain HF896_18660 PF00849 RNA pseudouridylate synthase HF896_18675 PF00291 Pyridoxal-phosphate dependent enzyme HF896_18695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_18695 PF03466 LysR substrate binding domain HF896_18700 PF03328 HpcH/HpaI aldolase/citrate lyase family HF896_18705 PF03401 Tripartite tricarboxylate transporter family receptor HF896_18710 PF02515 CoA-transferase family III HF896_18715 PF04909 Amidohydrolase HF896_18720 PF03401 Tripartite tricarboxylate transporter family receptor HF896_18725 PF12802 MarR family HF896_18735 PF00378 Enoyl-CoA hydratase/isomerase HF896_18740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_18740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_18740 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_18745 PF13193 AMP-binding enzyme C-terminal domain HF896_18745 PF00501 AMP-binding enzyme HF896_18750 PF01012 Electron transfer flavoprotein domain HF896_18750 PF00766 Electron transfer flavoprotein FAD-binding domain HF896_18755 PF01012 Electron transfer flavoprotein domain HF896_18760 PF03060 Nitronate monooxygenase HF896_18765 PF03401 Tripartite tricarboxylate transporter family receptor HF896_18770 PF02515 CoA-transferase family III HF896_18780 PF00378 Enoyl-CoA hydratase/isomerase HF896_18785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_18785 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_18785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_18790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_18790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_18790 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_18795 PF02803 Thiolase, C-terminal domain HF896_18795 PF00108 Thiolase, N-terminal domain HF896_18800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HF896_18800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HF896_18800 PF00378 Enoyl-CoA hydratase/isomerase HF896_18805 PF03466 LysR substrate binding domain HF896_18805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_18835 PF01435 Peptidase family M48 HF896_18845 PF01979 Amidohydrolase family HF896_18855 PF04343 Protein of unknown function, DUF488 HF896_18860 PF02627 Carboxymuconolactone decarboxylase family HF896_18865 PF17760 UvrA interaction domain HF896_18865 PF17755 UvrA DNA-binding domain HF896_18865 PF00005 ABC transporter HF896_18870 PF13458 Periplasmic binding protein HF896_18880 PF13609 Gram-negative porin HF896_18885 PF00083 Sugar (and other) transporter HF896_18885 PF08946 Osmosensory transporter coiled coil HF896_18895 PF00474 Sodium:solute symporter family HF896_18910 PF01323 DSBA-like thioredoxin domain HF896_18925 PF00682 HMGL-like HF896_18930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HF896_18935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HF896_18935 PF00289 Biotin carboxylase, N-terminal domain HF896_18935 PF02785 Biotin carboxylase C-terminal domain HF896_18935 PF00364 Biotin-requiring enzyme HF896_18945 PF00378 Enoyl-CoA hydratase/isomerase HF896_18950 PF01039 Carboxyl transferase domain HF896_18955 PF00501 AMP-binding enzyme HF896_18955 PF13193 AMP-binding enzyme C-terminal domain HF896_18970 PF05199 GMC oxidoreductase HF896_18970 PF00732 GMC oxidoreductase HF896_18975 PF13458 Periplasmic binding protein HF896_18980 PF02653 Branched-chain amino acid transport system / permease component HF896_18985 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_18985 PF00005 ABC transporter HF896_18990 PF00005 ABC transporter HF896_18995 PF05199 GMC oxidoreductase HF896_18995 PF00732 GMC oxidoreductase HF896_19000 PF00501 AMP-binding enzyme HF896_19000 PF13193 AMP-binding enzyme C-terminal domain HF896_19005 PF00155 Aminotransferase class I and II HF896_19010 PF00368 Hydroxymethylglutaryl-coenzyme A reductase HF896_19015 PF13419 Haloacid dehalogenase-like hydrolase HF896_19020 PF00563 EAL domain HF896_19020 PF00990 Diguanylate cyclase, GGDEF domain HF896_19020 PF00360 Phytochrome region HF896_19020 PF01590 GAF domain HF896_19025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF896_19035 PF08448 PAS fold HF896_19035 PF00563 EAL domain HF896_19035 PF00990 Diguanylate cyclase, GGDEF domain HF896_19060 PF03575 Peptidase family S51 HF896_19075 PF03401 Tripartite tricarboxylate transporter family receptor HF896_19090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_19090 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_19090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_19100 PF02803 Thiolase, C-terminal domain HF896_19100 PF00108 Thiolase, N-terminal domain HF896_19105 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) HF896_19110 PF00484 Carbonic anhydrase HF896_19115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_19115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_19115 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_19120 PF13411 MerR HTH family regulatory protein HF896_19155 PF01339 CheB methylesterase HF896_19155 PF00072 Response regulator receiver domain HF896_19160 PF03975 CheD chemotactic sensory transduction HF896_19165 PF03705 CheR methyltransferase, all-alpha domain HF896_19165 PF01739 CheR methyltransferase, SAM binding domain HF896_19170 PF01584 CheW-like domain HF896_19175 PF09078 CheY binding HF896_19175 PF01627 Hpt domain HF896_19175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_19175 PF01584 CheW-like domain HF896_19175 PF02895 Signal transducing histidine kinase, homodimeric domain HF896_19180 PF00072 Response regulator receiver domain HF896_19190 PF05384 Sensor protein DegS HF896_19190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_19190 PF07730 Histidine kinase HF896_19195 PF00072 Response regulator receiver domain HF896_19195 PF00196 Bacterial regulatory proteins, luxR family HF896_19200 PF01311 Bacterial export proteins, family 1 HF896_19205 PF01313 Bacterial export proteins, family 3 HF896_19210 PF00813 FliP family HF896_19220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HF896_19220 PF16973 Flagellar motor switch protein FliN N-terminal HF896_19225 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HF896_19225 PF02154 Flagellar motor switch protein FliM HF896_19245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HF896_19245 PF18269 T3SS EscN ATPase C-terminal domain HF896_19255 PF01706 FliG C-terminal domain HF896_19255 PF14841 FliG middle domain HF896_19255 PF14842 FliG N-terminal domain HF896_19260 PF08345 Flagellar M-ring protein C-terminal HF896_19260 PF01514 Secretory protein of YscJ/FliF family HF896_19265 PF02049 Flagellar hook-basal body complex protein FliE HF896_19280 PF02465 Flagellar hook-associated protein 2 N-terminus HF896_19280 PF07196 Flagellin hook IN motif HF896_19280 PF07195 Flagellar hook-associated protein 2 C-terminus HF896_19285 PF00669 Bacterial flagellin N-terminal helical region HF896_19285 PF00700 Bacterial flagellin C-terminal helical region HF896_19290 PF00700 Bacterial flagellin C-terminal helical region HF896_19290 PF07196 Flagellin hook IN motif HF896_19290 PF00669 Bacterial flagellin N-terminal helical region HF896_19295 PF05045 Rhamnan synthesis protein F HF896_19295 PF14307 Glycosyltransferase WbsX HF896_19300 PF03737 Aldolase/RraA HF896_19305 PF01618 MotA/TolQ/ExbB proton channel family HF896_19310 PF13677 Membrane MotB of proton-channel complex MotA/MotB HF896_19310 PF00691 OmpA family HF896_19315 PF00072 Response regulator receiver domain HF896_19320 PF04344 Chemotaxis phosphatase, CheZ HF896_19325 PF01312 FlhB HrpN YscU SpaS Family HF896_19330 PF00771 FHIPEP family HF896_19335 PF00448 SRP54-type protein, GTPase domain HF896_19345 PF04542 Sigma-70 region 2 HF896_19345 PF04539 Sigma-70 region 3 HF896_19345 PF04545 Sigma-70, region 4 HF896_19360 PF13144 Chaperone for flagella basal body P-ring formation HF896_19365 PF00460 Flagella basal body rod protein HF896_19370 PF00460 Flagella basal body rod protein HF896_19370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HF896_19375 PF13861 FlgD Tudor-like domain HF896_19375 PF13860 FlgD Ig-like domain HF896_19375 PF03963 Flagellar hook capping protein - N-terminal region HF896_19380 PF07559 Flagellar basal body protein FlaE HF896_19380 PF00460 Flagella basal body rod protein HF896_19380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HF896_19385 PF00460 Flagella basal body rod protein HF896_19385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HF896_19390 PF00460 Flagella basal body rod protein HF896_19390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HF896_19395 PF02107 Flagellar L-ring protein HF896_19400 PF02119 Flagellar P-ring protein HF896_19405 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HF896_19405 PF10135 Rod binding protein HF896_19415 PF00669 Bacterial flagellin N-terminal helical region HF896_19425 PF03060 Nitronate monooxygenase HF896_19430 PF00155 Aminotransferase class I and II HF896_19430 PF00392 Bacterial regulatory proteins, gntR family HF896_19440 PF00892 EamA-like transporter family HF896_19445 PF00155 Aminotransferase class I and II HF896_19450 PF02567 Phenazine biosynthesis-like protein HF896_19455 PF00291 Pyridoxal-phosphate dependent enzyme HF896_19480 PF00563 EAL domain HF896_19480 PF01590 GAF domain HF896_19480 PF00990 Diguanylate cyclase, GGDEF domain HF896_19480 PF00360 Phytochrome region HF896_19500 PF02633 Creatinine amidohydrolase HF896_19505 PF03401 Tripartite tricarboxylate transporter family receptor HF896_19530 PF01208 Uroporphyrinogen decarboxylase (URO-D) HF896_19535 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HF896_19535 PF17764 3′ DNA-binding domain (3′BD) HF896_19535 PF00271 Helicase conserved C-terminal domain HF896_19535 PF00270 DEAD/DEAH box helicase HF896_19535 PF18074 Primosomal protein N C-terminal domain HF896_19540 PF02803 Thiolase, C-terminal domain HF896_19540 PF00108 Thiolase, N-terminal domain HF896_19545 PF00378 Enoyl-CoA hydratase/isomerase HF896_19550 PF00501 AMP-binding enzyme HF896_19555 PF00005 ABC transporter HF896_19575 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_19575 PF00005 ABC transporter HF896_19585 PF03547 Membrane transport protein HF896_19590 PF00580 UvrD/REP helicase N-terminal domain HF896_19590 PF13361 UvrD-like helicase C-terminal domain HF896_19600 PF02253 Phospholipase A1 HF896_19605 PF03781 Sulfatase-modifying factor enzyme 1 HF896_19610 PF00884 Sulfatase HF896_19615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HF896_19620 PF01494 FAD binding domain HF896_19625 PF01557 Fumarylacetoacetate (FAA) hydrolase family HF896_19630 PF13609 Gram-negative porin HF896_19635 PF00392 Bacterial regulatory proteins, gntR family HF896_19635 PF07729 FCD domain HF896_19645 PF00582 Universal stress protein family HF896_19650 PF01702 Queuine tRNA-ribosyltransferase HF896_19670 PF03401 Tripartite tricarboxylate transporter family receptor HF896_19675 PF03401 Tripartite tricarboxylate transporter family receptor HF896_19680 PF03737 Aldolase/RraA HF896_19690 PF00501 AMP-binding enzyme HF896_19690 PF01553 Acyltransferase HF896_19695 PF01434 Peptidase family M41 HF896_19695 PF17862 AAA+ lid domain HF896_19695 PF00004 ATPase family associated with various cellular activities (AAA) HF896_19695 PF06480 FtsH Extracellular HF896_19700 PF00156 Phosphoribosyl transferase domain HF896_19705 PF01738 Dienelactone hydrolase family HF896_19705 PF00156 Phosphoribosyl transferase domain HF896_19710 PF01738 Dienelactone hydrolase family HF896_19710 PF00156 Phosphoribosyl transferase domain HF896_19715 PF08240 Alcohol dehydrogenase GroES-like domain HF896_19720 PF03401 Tripartite tricarboxylate transporter family receptor HF896_19725 PF13454 FAD-NAD(P)-binding HF896_19750 PF13350 Tyrosine phosphatase family HF896_19755 PF06213 Cobalamin biosynthesis protein CobT HF896_19755 PF11775 Cobalamin biosynthesis protein CobT VWA domain HF896_19760 PF08406 CbbQ/NirQ/NorQ C-terminal HF896_19760 PF07728 AAA domain (dynein-related subfamily) HF896_19760 PF12556 Cobaltochelatase CobS subunit N terminal HF896_19765 PF09339 IclR helix-turn-helix domain HF896_19765 PF01614 Bacterial transcriptional regulator HF896_19770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HF896_19770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HF896_19770 PF00205 Thiamine pyrophosphate enzyme, central domain HF896_19775 PF01515 Phosphate acetyl/butaryl transferase HF896_19785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_19785 PF03466 LysR substrate binding domain HF896_19790 PF00378 Enoyl-CoA hydratase/isomerase HF896_19805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_19805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_19805 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_19810 PF13380 CoA binding domain HF896_19810 PF13607 Succinyl-CoA ligase like flavodoxin domain HF896_19885 PF03601 Conserved hypothetical protein 698 HF896_19890 PF03466 LysR substrate binding domain HF896_19890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_19910 PF02899 Phage integrase, N-terminal SAM-like domain HF896_19910 PF00589 Phage integrase family HF896_19915 PF00589 Phage integrase family HF896_19920 PF00589 Phage integrase family HF896_19920 PF02899 Phage integrase, N-terminal SAM-like domain HF896_19930 PF01196 Ribosomal protein L17 HF896_19935 PF01000 RNA polymerase Rpb3/RpoA insert domain HF896_19935 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HF896_19935 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HF896_19940 PF01479 S4 domain HF896_19940 PF00163 Ribosomal protein S4/S9 N-terminal domain HF896_19945 PF00411 Ribosomal protein S11 HF896_19950 PF00416 Ribosomal protein S13/S18 HF896_19955 PF00444 Ribosomal protein L36 HF896_19960 PF00344 SecY translocase HF896_19965 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HF896_19970 PF00327 Ribosomal protein L30p/L7e HF896_19975 PF00333 Ribosomal protein S5, N-terminal domain HF896_19975 PF03719 Ribosomal protein S5, C-terminal domain HF896_19980 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HF896_19985 PF00347 Ribosomal protein L6 HF896_19990 PF00410 Ribosomal protein S8 HF896_19995 PF00253 Ribosomal protein S14p/S29e HF896_20000 PF00673 ribosomal L5P family C-terminus HF896_20000 PF00281 Ribosomal protein L5 HF896_20005 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HF896_20010 PF00238 Ribosomal protein L14p/L23e HF896_20015 PF01266 FAD dependent oxidoreductase HF896_20015 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HF896_20020 PF08220 DeoR-like helix-turn-helix domain HF896_20020 PF00455 DeoR C terminal sensor domain HF896_20025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HF896_20025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HF896_20030 PF14748 Pyrroline-5-carboxylate reductase dimerisation HF896_20030 PF03807 NADP oxidoreductase coenzyme F420-dependent HF896_20040 PF01040 UbiA prenyltransferase family HF896_20045 PF00210 Ferritin-like domain HF896_20050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_20050 PF03466 LysR substrate binding domain HF896_20055 PF17191 RecG wedge domain HF896_20055 PF00271 Helicase conserved C-terminal domain HF896_20055 PF00270 DEAD/DEAH box helicase HF896_20060 PF01966 HD domain HF896_20060 PF11871 Domain of unknown function (DUF3391) HF896_20065 PF02547 Queuosine biosynthesis protein HF896_20080 PF03401 Tripartite tricarboxylate transporter family receptor HF896_20085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_20085 PF03466 LysR substrate binding domain HF896_20090 PF03167 Uracil DNA glycosylase superfamily HF896_20095 PF00218 Indole-3-glycerol phosphate synthase HF896_20105 PF00591 Glycosyl transferase family, a/b domain HF896_20105 PF02885 Glycosyl transferase family, helical bundle domain HF896_20110 PF00117 Glutamine amidotransferase class-I HF896_20125 PF13614 AAA domain HF896_20160 PF00436 Single-strand binding protein family HF896_20165 PF01131 DNA topoisomerase HF896_20165 PF01751 Toprim domain HF896_20170 PF00145 C-5 cytosine-specific DNA methylase HF896_20280 PF04229 GrpB protein HF896_20280 PF13673 Acetyltransferase (GNAT) domain HF896_20370 PF04002 RadC-like JAB domain HF896_20440 PF08361 MAATS-type transcriptional repressor, C-terminal region HF896_20440 PF00440 Bacterial regulatory proteins, tetR family HF896_20445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_20445 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_20445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_20450 PF00005 ABC transporter HF896_20465 PF02653 Branched-chain amino acid transport system / permease component HF896_20470 PF00501 AMP-binding enzyme HF896_20475 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_20475 PF00005 ABC transporter HF896_20480 PF00106 short chain dehydrogenase HF896_20485 PF00108 Thiolase, N-terminal domain HF896_20485 PF02803 Thiolase, C-terminal domain HF896_20495 PF00378 Enoyl-CoA hydratase/isomerase HF896_20520 PF01758 Sodium Bile acid symporter family HF896_20545 PF01022 Bacterial regulatory protein, arsR family HF896_20550 PF02374 Anion-transporting ATPase HF896_20590 PF00425 chorismate binding enzyme HF896_20590 PF04715 Anthranilate synthase component I, N terminal region HF896_20595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF896_20595 PF02203 Tar ligand binding domain homologue HF896_20595 PF00672 HAMP domain HF896_20600 PF00563 EAL domain HF896_20600 PF00990 Diguanylate cyclase, GGDEF domain HF896_20600 PF03707 Bacterial signalling protein N terminal repeat HF896_20605 PF13419 Haloacid dehalogenase-like hydrolase HF896_20615 PF00834 Ribulose-phosphate 3 epimerase family HF896_20620 PF04379 ApaG domain HF896_20635 PF04107 Glutamate-cysteine ligase family 2(GCS2) HF896_20640 PF02769 AIR synthase related protein, C-terminal domain HF896_20640 PF00586 AIR synthase related protein, N-terminal domain HF896_20645 PF00440 Bacterial regulatory proteins, tetR family HF896_20645 PF08361 MAATS-type transcriptional repressor, C-terminal region HF896_20650 PF00561 alpha/beta hydrolase fold HF896_20650 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HF896_20660 PF02321 Outer membrane efflux protein HF896_20665 PF13533 Biotin-lipoyl like HF896_20670 PF00005 ABC transporter HF896_20680 PF01515 Phosphate acetyl/butaryl transferase HF896_20685 PF00871 Acetokinase family HF896_20690 PF04608 Phosphatidylglycerophosphatase A HF896_20695 PF02464 Competence-damaged protein HF896_20700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF896_20700 PF00672 HAMP domain HF896_20700 PF02203 Tar ligand binding domain homologue HF896_20705 PF03707 Bacterial signalling protein N terminal repeat HF896_20705 PF00990 Diguanylate cyclase, GGDEF domain HF896_20705 PF00563 EAL domain HF896_20710 PF00072 Response regulator receiver domain HF896_20710 PF03861 ANTAR domain HF896_20715 PF07536 HWE histidine kinase HF896_20715 PF13426 PAS domain HF896_20720 PF03695 Uncharacterised protein family (UPF0149) HF896_20720 PF02810 SEC-C motif HF896_20730 PF02926 THUMP domain HF896_20730 PF01170 Putative RNA methylase family UPF0020 HF896_20735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF896_20735 PF00672 HAMP domain HF896_20735 PF02743 Cache domain HF896_20745 PF04552 Sigma-54, DNA binding domain HF896_20745 PF04963 Sigma-54 factor, core binding domain HF896_20745 PF00309 Sigma-54 factor, Activator interacting domain (AID) HF896_20750 PF00005 ABC transporter HF896_20760 PF01323 DSBA-like thioredoxin domain HF896_20760 PF00085 Thioredoxin HF896_20770 PF00750 tRNA synthetases class I (R) HF896_20770 PF05746 DALR anticodon binding domain HF896_20770 PF03485 Arginyl tRNA synthetase N terminal domain HF896_20785 PF00375 Sodium:dicarboxylate symporter family HF896_20790 PF00512 His Kinase A (phospho-acceptor) domain HF896_20790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_20795 PF00196 Bacterial regulatory proteins, luxR family HF896_20795 PF00072 Response regulator receiver domain HF896_20800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_20800 PF03466 LysR substrate binding domain HF896_20805 PF01274 Malate synthase HF896_20815 PF01361 Tautomerase enzyme HF896_20825 PF13230 Glutamine amidotransferases class-II HF896_20855 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HF896_20855 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HF896_20860 PF03594 Benzoate membrane transport protein HF896_20865 PF02705 K+ potassium transporter HF896_20875 PF02386 Cation transport protein HF896_20880 PF02254 TrkA-N domain HF896_20880 PF02080 TrkA-C domain HF896_20885 PF00171 Aldehyde dehydrogenase family HF896_20910 PF06144 DNA polymerase III, delta subunit HF896_20910 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HF896_20920 PF09334 tRNA synthetases class I (M) HF896_20920 PF13603 Leucyl-tRNA synthetase, Domain 2 HF896_20920 PF00133 tRNA synthetases class I (I, L, M and V) HF896_20920 PF08264 Anticodon-binding domain of tRNA HF896_20925 PF00924 Mechanosensitive ion channel HF896_20930 PF00171 Aldehyde dehydrogenase family HF896_20940 PF02954 Bacterial regulatory protein, Fis family HF896_20940 PF00158 Sigma-54 interaction domain HF896_20940 PF01590 GAF domain HF896_20950 PF00990 Diguanylate cyclase, GGDEF domain HF896_20950 PF00563 EAL domain HF896_20950 PF13426 PAS domain HF896_20955 PF02472 Biopolymer transport protein ExbD/TolR HF896_20960 PF01618 MotA/TolQ/ExbB proton channel family HF896_20965 PF01113 Dihydrodipicolinate reductase, N-terminus HF896_20965 PF05173 Dihydrodipicolinate reductase, C-terminus HF896_20970 PF04355 SmpA / OmlA family HF896_20975 PF01475 Ferric uptake regulator family HF896_20980 PF02603 HPr Serine kinase N terminus HF896_20980 PF07475 HPr Serine kinase C-terminal domain HF896_20985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HF896_20990 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HF896_20995 PF01259 SAICAR synthetase HF896_21000 PF00085 Thioredoxin HF896_21005 PF00731 AIR carboxylase HF896_21010 PF02222 ATP-grasp domain HF896_21010 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HF896_21015 PF01300 Telomere recombination HF896_21015 PF03481 Putative GTP-binding controlling metal-binding HF896_21030 PF00872 Transposase, Mutator family HF896_21065 PF03922 OmpW family HF896_21075 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HF896_21080 PF00814 Glycoprotease family HF896_21095 PF01544 CorA-like Mg2+ transporter protein HF896_21110 PF01048 Phosphorylase superfamily HF896_21115 PF13193 AMP-binding enzyme C-terminal domain HF896_21115 PF00501 AMP-binding enzyme HF896_21120 PF02233 NAD(P) transhydrogenase beta subunit HF896_21125 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HF896_21125 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HF896_21125 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HF896_21135 PF01116 Fructose-bisphosphate aldolase class-II HF896_21140 PF00224 Pyruvate kinase, barrel domain HF896_21140 PF02887 Pyruvate kinase, alpha/beta domain HF896_21145 PF05195 Aminopeptidase P, N-terminal domain HF896_21145 PF00557 Metallopeptidase family M24 HF896_21150 PF00378 Enoyl-CoA hydratase/isomerase HF896_21155 PF03401 Tripartite tricarboxylate transporter family receptor HF896_21160 PF02515 CoA-transferase family III HF896_21175 PF03401 Tripartite tricarboxylate transporter family receptor HF896_21180 PF03466 LysR substrate binding domain HF896_21180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_21185 PF00483 Nucleotidyl transferase HF896_21190 PF02779 Transketolase, pyrimidine binding domain HF896_21190 PF02780 Transketolase, C-terminal domain HF896_21190 PF00456 Transketolase, thiamine diphosphate binding domain HF896_21195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HF896_21195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HF896_21205 PF07722 Peptidase C26 HF896_21210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_21210 PF03466 LysR substrate binding domain HF896_21215 PF04909 Amidohydrolase HF896_21245 PF07715 TonB-dependent Receptor Plug Domain HF896_21245 PF00593 TonB dependent receptor HF896_21255 PF03401 Tripartite tricarboxylate transporter family receptor HF896_21270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_21270 PF03466 LysR substrate binding domain HF896_21280 PF00106 short chain dehydrogenase HF896_21310 PF03401 Tripartite tricarboxylate transporter family receptor HF896_21315 PF13380 CoA binding domain HF896_21315 PF13607 Succinyl-CoA ligase like flavodoxin domain HF896_21315 PF00583 Acetyltransferase (GNAT) family HF896_21320 PF02798 Glutathione S-transferase, N-terminal domain HF896_21335 PF07690 Major Facilitator Superfamily HF896_21345 PF00171 Aldehyde dehydrogenase family HF896_21365 PF02515 CoA-transferase family III HF896_21370 PF02310 B12 binding domain HF896_21370 PF01642 Methylmalonyl-CoA mutase HF896_21375 PF01642 Methylmalonyl-CoA mutase HF896_21375 PF02310 B12 binding domain HF896_21380 PF00378 Enoyl-CoA hydratase/isomerase HF896_21385 PF09339 IclR helix-turn-helix domain HF896_21385 PF01614 Bacterial transcriptional regulator HF896_21390 PF01131 DNA topoisomerase HF896_21390 PF01751 Toprim domain HF896_21400 PF02237 Biotin protein ligase C terminal domain HF896_21400 PF03099 Biotin/lipoate A/B protein ligase family HF896_21400 PF08279 HTH domain HF896_21410 PF00107 Zinc-binding dehydrogenase HF896_21410 PF08240 Alcohol dehydrogenase GroES-like domain HF896_21420 PF13452 N-terminal half of MaoC dehydratase HF896_21430 PF13193 AMP-binding enzyme C-terminal domain HF896_21430 PF00501 AMP-binding enzyme HF896_21430 PF16177 Acetyl-coenzyme A synthetase N-terminus HF896_21435 PF12802 MarR family HF896_21455 PF03401 Tripartite tricarboxylate transporter family receptor HF896_21460 PF08521 Two-component sensor kinase N-terminal HF896_21460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_21460 PF00512 His Kinase A (phospho-acceptor) domain HF896_21465 PF00486 Transcriptional regulatory protein, C terminal HF896_21465 PF00072 Response regulator receiver domain HF896_21470 PF00266 Aminotransferase class-V HF896_21475 PF00528 Binding-protein-dependent transport system inner membrane component HF896_21480 PF00005 ABC transporter HF896_21495 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase HF896_21500 PF00171 Aldehyde dehydrogenase family HF896_21510 PF01266 FAD dependent oxidoreductase HF896_21515 PF00842 Alanine racemase, C-terminal domain HF896_21515 PF01168 Alanine racemase, N-terminal domain HF896_21520 PF01266 FAD dependent oxidoreductase HF896_21525 PF01037 Lrp/AsnC ligand binding domain HF896_21535 PF00154 recA bacterial DNA recombination protein HF896_21540 PF02631 RecX family HF896_21550 PF02355 Protein export membrane protein HF896_21550 PF07549 SecD/SecF GG Motif HF896_21555 PF02355 Protein export membrane protein HF896_21555 PF13721 SecD export protein N-terminal TM region HF896_21555 PF07549 SecD/SecF GG Motif HF896_21560 PF02699 Preprotein translocase subunit HF896_21570 PF01037 Lrp/AsnC ligand binding domain HF896_21575 PF05977 Transmembrane secretion effector HF896_21580 PF06725 3D domain HF896_21580 PF03562 MltA specific insert domain HF896_21585 PF00691 OmpA family HF896_21585 PF04972 BON domain HF896_21590 PF00196 Bacterial regulatory proteins, luxR family HF896_21590 PF00072 Response regulator receiver domain HF896_21595 PF00989 PAS fold HF896_21595 PF00512 His Kinase A (phospho-acceptor) domain HF896_21595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_21600 PF00795 Carbon-nitrogen hydrolase HF896_21610 PF08335 GlnD PII-uridylyltransferase HF896_21610 PF03710 Glutamate-ammonia ligase adenylyltransferase HF896_21615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HF896_21620 PF00873 AcrB/AcrD/AcrF family HF896_21625 PF13417 Glutathione S-transferase, N-terminal domain HF896_21625 PF00043 Glutathione S-transferase, C-terminal domain HF896_21630 PF08328 Adenylosuccinate lyase C-terminal HF896_21630 PF00206 Lyase HF896_21635 PF07152 YaeQ protein HF896_21650 PF03741 Integral membrane protein TerC family HF896_21660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_21660 PF03466 LysR substrate binding domain HF896_21670 PF02515 CoA-transferase family III HF896_21675 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV HF896_21680 PF01435 Peptidase family M48 HF896_21680 PF13181 Tetratricopeptide repeat HF896_21685 PF01967 MoaC family HF896_21700 PF00114 Pilin (bacterial filament) HF896_21700 PF07963 Prokaryotic N-terminal methylation motif HF896_21705 PF00753 Metallo-beta-lactamase superfamily HF896_21705 PF12706 Beta-lactamase superfamily domain HF896_21710 PF16697 Inner membrane component of T3SS, cytoplasmic domain HF896_21720 PF03741 Integral membrane protein TerC family HF896_21725 PF02629 CoA binding domain HF896_21725 PF00549 CoA-ligase HF896_21730 PF00549 CoA-ligase HF896_21730 PF08442 ATP-grasp domain HF896_21735 PF01118 Semialdehyde dehydrogenase, NAD binding domain HF896_21740 PF17782 DprA winged helix domain HF896_21740 PF02481 DNA recombination-mediator protein A HF896_21750 PF01327 Polypeptide deformylase HF896_21760 PF00551 Formyl transferase HF896_21760 PF02911 Formyl transferase, C-terminal domain HF896_21775 PF00162 Phosphoglycerate kinase HF896_21790 PF00892 EamA-like transporter family HF896_21795 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HF896_21805 PF03401 Tripartite tricarboxylate transporter family receptor HF896_21815 PF02203 Tar ligand binding domain homologue HF896_21815 PF00672 HAMP domain HF896_21815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HF896_21820 PF17760 UvrA interaction domain HF896_21820 PF17755 UvrA DNA-binding domain HF896_21825 PF07690 Major Facilitator Superfamily HF896_21830 PF00436 Single-strand binding protein family HF896_21840 PF02515 CoA-transferase family III HF896_21845 PF03401 Tripartite tricarboxylate transporter family receptor HF896_21855 PF03401 Tripartite tricarboxylate transporter family receptor HF896_21870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_21870 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_21870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_21875 PF02515 CoA-transferase family III HF896_21880 PF00378 Enoyl-CoA hydratase/isomerase HF896_21895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_21895 PF03466 LysR substrate binding domain HF896_21900 PF04303 PrpF protein HF896_21905 PF03401 Tripartite tricarboxylate transporter family receptor HF896_21910 PF13609 Gram-negative porin HF896_21915 PF03466 LysR substrate binding domain HF896_21915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_21920 PF04205 FMN-binding domain HF896_21920 PF00890 FAD binding domain HF896_21930 PF03401 Tripartite tricarboxylate transporter family receptor HF896_21935 PF00158 Sigma-54 interaction domain HF896_21935 PF02954 Bacterial regulatory protein, Fis family HF896_21935 PF00072 Response regulator receiver domain HF896_21940 PF01039 Carboxyl transferase domain HF896_21945 PF03401 Tripartite tricarboxylate transporter family receptor HF896_21955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HF896_21955 PF02785 Biotin carboxylase C-terminal domain HF896_21955 PF00289 Biotin carboxylase, N-terminal domain HF896_21960 PF00364 Biotin-requiring enzyme HF896_21980 PF00593 TonB dependent receptor HF896_21980 PF07715 TonB-dependent Receptor Plug Domain HF896_21995 PF03401 Tripartite tricarboxylate transporter family receptor HF896_22000 PF02515 CoA-transferase family III HF896_22010 PF13193 AMP-binding enzyme C-terminal domain HF896_22010 PF00501 AMP-binding enzyme HF896_22015 PF00677 Lumazine binding domain HF896_22020 PF01810 LysE type translocator HF896_22025 PF00512 His Kinase A (phospho-acceptor) domain HF896_22025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_22025 PF00672 HAMP domain HF896_22025 PF16527 Two-component sensor protein CpxA, periplasmic domain HF896_22030 PF00072 Response regulator receiver domain HF896_22030 PF00486 Transcriptional regulatory protein, C terminal HF896_22045 PF00111 2Fe-2S iron-sulfur cluster binding domain HF896_22045 PF00175 Oxidoreductase NAD-binding domain HF896_22045 PF00970 Oxidoreductase FAD-binding domain HF896_22050 PF01292 Prokaryotic cytochrome b561 HF896_22065 PF00970 Oxidoreductase FAD-binding domain HF896_22065 PF00111 2Fe-2S iron-sulfur cluster binding domain HF896_22065 PF00175 Oxidoreductase NAD-binding domain HF896_22070 PF02424 ApbE family HF896_22085 PF00690 Cation transporter/ATPase, N-terminus HF896_22085 PF00689 Cation transporting ATPase, C-terminus HF896_22095 PF03060 Nitronate monooxygenase HF896_22100 PF03401 Tripartite tricarboxylate transporter family receptor HF896_22105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_22105 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_22105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_22110 PF01614 Bacterial transcriptional regulator HF896_22110 PF09339 IclR helix-turn-helix domain HF896_22120 PF02515 CoA-transferase family III HF896_22135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HF896_22135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HF896_22135 PF02770 Acyl-CoA dehydrogenase, middle domain HF896_22140 PF03401 Tripartite tricarboxylate transporter family receptor HF896_22145 PF09339 IclR helix-turn-helix domain HF896_22150 PF02515 CoA-transferase family III HF896_22155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_22155 PF03466 LysR substrate binding domain HF896_22160 PF03401 Tripartite tricarboxylate transporter family receptor HF896_22210 PF03466 LysR substrate binding domain HF896_22210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_22215 PF00202 Aminotransferase class-III HF896_22220 PF00171 Aldehyde dehydrogenase family HF896_22225 PF00990 Diguanylate cyclase, GGDEF domain HF896_22225 PF05230 MASE2 domain HF896_22230 PF07729 FCD domain HF896_22230 PF00392 Bacterial regulatory proteins, gntR family HF896_22240 PF02653 Branched-chain amino acid transport system / permease component HF896_22245 PF02653 Branched-chain amino acid transport system / permease component HF896_22245 PF11862 Domain of unknown function (DUF3382) HF896_22250 PF12399 Branched-chain amino acid ATP-binding cassette transporter HF896_22250 PF00005 ABC transporter HF896_22255 PF00005 ABC transporter HF896_22260 PF07687 Peptidase dimerisation domain HF896_22260 PF01546 Peptidase family M20/M25/M40 HF896_22265 PF07364 Metallopeptidase family M81 HF896_22265 PF07171 MlrC C-terminus HF896_22270 PF01515 Phosphate acetyl/butaryl transferase HF896_22270 PF03949 Malic enzyme, NAD binding domain HF896_22270 PF00390 Malic enzyme, N-terminal domain HF896_22275 PF00545 ribonuclease HF896_22285 PF00398 Ribosomal RNA adenine dimethylase HF896_22290 PF09312 SurA N-terminal domain HF896_22290 PF00639 PPIC-type PPIASE domain HF896_22295 PF04453 LPS transport system D HF896_22300 PF01636 Phosphotransferase enzyme family HF896_22305 PF04452 RNA methyltransferase HF896_22320 PF06470 SMC proteins Flexible Hinge Domain HF896_22320 PF02463 RecF/RecN/SMC N terminal domain HF896_22330 PF00990 Diguanylate cyclase, GGDEF domain HF896_22330 PF03707 Bacterial signalling protein N terminal repeat HF896_22330 PF00563 EAL domain HF896_22335 PF08241 Methyltransferase domain HF896_22340 PF00561 alpha/beta hydrolase fold HF896_22345 PF01169 Uncharacterized protein family UPF0016 HF896_22350 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HF896_22355 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HF896_22360 PF00106 short chain dehydrogenase HF896_22375 PF00571 CBS domain HF896_22375 PF01380 SIS domain HF896_22380 PF02254 TrkA-N domain HF896_22380 PF02080 TrkA-C domain HF896_22380 PF00999 Sodium/hydrogen exchanger family HF896_22385 PF00156 Phosphoribosyl transferase domain HF896_22400 PF01926 50S ribosome-binding GTPase HF896_22400 PF12631 MnmE helical domain HF896_22400 PF10396 GTP-binding protein TrmE N-terminus HF896_22405 PF00497 Bacterial extracellular solute-binding proteins, family 3 HF896_22410 PF01266 FAD dependent oxidoreductase HF896_22415 PF03466 LysR substrate binding domain HF896_22415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HF896_22430 PF03576 Peptidase family S58 HF896_22435 PF00528 Binding-protein-dependent transport system inner membrane component HF896_22435 PF12911 N-terminal TM domain of oligopeptide transport permease C HF896_22440 PF00528 Binding-protein-dependent transport system inner membrane component HF896_22445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF896_22450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HF896_22450 PF00005 ABC transporter HF896_22455 PF01112 Asparaginase HF896_22470 PF13426 PAS domain HF896_22470 PF08448 PAS fold HF896_22470 PF00512 His Kinase A (phospho-acceptor) domain HF896_22470 PF00072 Response regulator receiver domain HF896_22470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HF896_22475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HF896_22480 PF02096 60Kd inner membrane protein HF896_22480 PF14849 YidC periplasmic domain HF896_22485 PF01809 Putative membrane protein insertion efficiency factor HF896_22490 PF00825 Ribonuclease P HF896_22495 PF00468 Ribosomal protein L34