Alide2_0001	PF00308	Bacterial dnaA  protein
Alide2_0001	PF08299	Bacterial dnaA protein helix-turn-helix
Alide2_0001	PF11638	DnaA N-terminal domain
Alide2_0002	PF00712	DNA polymerase III beta subunit, N-terminal domain
Alide2_0002	PF02767	DNA polymerase III beta subunit, central domain
Alide2_0002	PF02768	DNA polymerase III beta subunit, C-terminal domain
Alide2_0003	PF00204	DNA gyrase B
Alide2_0003	PF00986	DNA gyrase B subunit, carboxyl terminus
Alide2_0003	PF01751	Toprim domain
Alide2_0003	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_0005	PF01381	Helix-turn-helix
Alide2_0006	PF00665	Integrase core domain
Alide2_0006	PF13276	Alide2_0006
Alide2_0007	PF01527	Transposase
Alide2_0009	PF03692	Alide2_0009
Alide2_0010	PF02515	CoA-transferase family III
Alide2_0011	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_0012	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0012	PF03466	LysR substrate binding domain
Alide2_0013	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0014	PF07287	Alide2_0014
Alide2_0015	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
Alide2_0015	PF00364	Biotin-requiring enzyme
Alide2_0015	PF02785	Biotin carboxylase C-terminal domain
Alide2_0015	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
Alide2_0016	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0016	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0016	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0017	PF01039	Carboxyl transferase domain
Alide2_0018	PF00708	Acylphosphatase
Alide2_0019	PF14697	4Fe-4S dicluster domain
Alide2_0020	PF00742	Homoserine dehydrogenase
Alide2_0020	PF03447	Homoserine dehydrogenase, NAD binding domain
Alide2_0021	PF06733	DEAD_2
Alide2_0021	PF13307	Helicase C-terminal domain
Alide2_0022	PF00929	Exonuclease
Alide2_0023	PF00877	NlpC/P60 family
Alide2_0024	PF00793	DAHP synthetase I family
Alide2_0025	PF00563	EAL domain
Alide2_0025	PF00989	PAS fold
Alide2_0025	PF00990	GGDEF domain
Alide2_0025	PF13185	GAF domain
Alide2_0025	PF13188	PAS domain
Alide2_0026	PF01614	Bacterial transcriptional regulator
Alide2_0026	PF09339	IclR helix-turn-helix domain
Alide2_0027	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0028	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0028	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0029	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0029	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0029	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0030	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0031	PF13380	CoA binding domain
Alide2_0031	PF13549	ATP-grasp domain
Alide2_0031	PF13607	Succinyl-CoA ligase like flavodoxin domain
Alide2_0032	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_0033	PF01614	Bacterial transcriptional regulator
Alide2_0033	PF09339	IclR helix-turn-helix domain
Alide2_0034	PF09411	Lipid A 3-O-deacylase (PagL)
Alide2_0035	PF07813	LTXXQ motif family protein
Alide2_0036	PF04381	Putative exonuclease, RdgC
Alide2_0037	PF07670	Nucleoside recognition
Alide2_0038	PF11730	Alide2_0038
Alide2_0039	PF02449	Beta-galactosidase
Alide2_0040	PF00376	MerR family regulatory protein
Alide2_0040	PF09278	MerR, DNA binding
Alide2_0041	PF00403	Heavy-metal-associated domain
Alide2_0042	PF00122	E1-E2 ATPase
Alide2_0042	PF00403	Heavy-metal-associated domain
Alide2_0042	PF00702	haloacid dehalogenase-like hydrolase
Alide2_0043	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
Alide2_0043	PF00672	HAMP domain
Alide2_0043	PF12729	Alide2_0043
Alide2_0044	PF00873	AcrB/AcrD/AcrF family
Alide2_0045	PF16576	Alide2_0045
Alide2_0046	PF02321	Outer membrane efflux protein
Alide2_0047	PF00072	Response regulator receiver domain
Alide2_0047	PF00486	Transcriptional regulatory protein, C terminal
Alide2_0048	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_0048	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_0048	PF08521	Alide2_0048
Alide2_0049	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
Alide2_0050	PF00043	Glutathione S-transferase, C-terminal domain
Alide2_0050	PF13417	Glutathione S-transferase, N-terminal domain
Alide2_0052	PF03358	NADPH-dependent FMN reductase
Alide2_0053	PF01134	Glucose inhibited division protein A
Alide2_0053	PF13932	GidA associated domain 3
Alide2_0055	PF02527	rRNA small subunit methyltransferase G
Alide2_0056	PF01810	Alide2_0056
Alide2_0057	PF13614	AAA domain
Alide2_0058	PF06821	Serine hydrolase
Alide2_0059	PF02195	ParB-like nuclease domain
Alide2_0061	PF01471	Putative peptidoglycan binding domain
Alide2_0062	PF02311	AraC-like ligand binding domain
Alide2_0062	PF12833	Helix-turn-helix domain
Alide2_0063	PF07690	Major Facilitator Superfamily
Alide2_0064	PF00924	Mechanosensitive ion channel
Alide2_0066	PF01565	FAD binding domain
Alide2_0066	PF02913	FAD linked oxidases, C-terminal domain
Alide2_0068	PF01923	Cobalamin adenosyltransferase
Alide2_0069	PF03061	Thioesterase superfamily
Alide2_0070	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
Alide2_0070	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
Alide2_0071	PF13453	Alide2_0071
Alide2_0072	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0072	PF03466	LysR substrate binding domain
Alide2_0073	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0074	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_0075	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_0076	PF02627	Carboxymuconolactone decarboxylase family
Alide2_0077	PF00860	Permease family
Alide2_0078	PF05050	Methyltransferase FkbM domain
Alide2_0079	PF01494	FAD binding domain
Alide2_0080	PF00501	AMP-binding enzyme
Alide2_0080	PF16177	Alide2_0080
Alide2_0081	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0081	PF03466	LysR substrate binding domain
Alide2_0082	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0083	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0083	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0084	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0084	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0085	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_0086	PF01066	CDP-alcohol phosphatidyltransferase
Alide2_0090	PF03775	Septum formation inhibitor MinC, C-terminal domain
Alide2_0090	PF05209	Septum formation inhibitor MinC, N-terminal domain
Alide2_0091	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
Alide2_0092	PF03776	Septum formation topological specificity factor MinE
Alide2_0093	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0093	PF03466	LysR substrate binding domain
Alide2_0094	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0095	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
Alide2_0095	PF13378	Enolase C-terminal domain-like
Alide2_0096	PF01613	Flavin reductase like domain
Alide2_0097	PF12697	Alpha/beta hydrolase family
Alide2_0098	PF00440	Bacterial regulatory proteins, tetR family
Alide2_0099	PF00582	Universal stress protein family
Alide2_0100	PF00149	Calcineurin-like phosphoesterase
Alide2_0101	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0101	PF03466	LysR substrate binding domain
Alide2_0103	PF00821	Phosphoenolpyruvate carboxykinase
Alide2_0103	PF17297	Alide2_0103
Alide2_0105	PF00291	Pyridoxal-phosphate dependent enzyme
Alide2_0105	PF13291	ACT domain
Alide2_0106	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0106	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0107	PF00122	E1-E2 ATPase
Alide2_0107	PF00689	Cation transporting ATPase, C-terminus
Alide2_0107	PF00690	Cation transporter/ATPase, N-terminus
Alide2_0107	PF00702	haloacid dehalogenase-like hydrolase
Alide2_0108	PF02574	Homocysteine S-methyltransferase
Alide2_0109	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0109	PF03466	LysR substrate binding domain
Alide2_0110	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0110	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0110	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0111	PF07883	Cupin domain
Alide2_0112	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0113	PF00270	DEAD/DEAH box helicase
Alide2_0113	PF00271	Helicase conserved C-terminal domain
Alide2_0113	PF00570	HRDC domain
Alide2_0113	PF09382	RQC domain
Alide2_0113	PF16124	Alide2_0113
Alide2_0114	PF04055	Radical SAM superfamily
Alide2_0114	PF13353	4Fe-4S single cluster domain
Alide2_0115	PF13597	Anaerobic ribonucleoside-triphosphate reductase
Alide2_0116	PF03477	ATP cone domain
Alide2_0116	PF13597	Anaerobic ribonucleoside-triphosphate reductase
Alide2_0117	PF00563	EAL domain
Alide2_0117	PF00990	GGDEF domain
Alide2_0117	PF08448	PAS fold
Alide2_0117	PF13426	PAS domain
Alide2_0117	PF17159	Alide2_0117
Alide2_0118	PF01814	Hemerythrin HHE cation binding domain
Alide2_0119	PF00115	Cytochrome C and Quinol oxidase polypeptide I
Alide2_0120	PF00158	Sigma-54 interaction domain
Alide2_0120	PF02954	Bacterial regulatory protein, Fis family
Alide2_0121	PF08768	Domain of unknown function (DUF1794)
Alide2_0122	PF03313	Alide2_0122
Alide2_0122	PF03315	Serine dehydratase beta chain
Alide2_0123	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0124	PF00501	AMP-binding enzyme
Alide2_0124	PF13193	AMP-binding enzyme C-terminal domain
Alide2_0125	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0126	PF03061	Thioesterase superfamily
Alide2_0127	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0128	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0129	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0129	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0129	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0130	PF00501	AMP-binding enzyme
Alide2_0130	PF13193	AMP-binding enzyme C-terminal domain
Alide2_0131	PF00108	Thiolase, N-terminal domain
Alide2_0131	PF02803	Thiolase, C-terminal domain
Alide2_0132	PF00106	short chain dehydrogenase
Alide2_0133	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0134	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_0136	PF01614	Bacterial transcriptional regulator
Alide2_0136	PF09339	IclR helix-turn-helix domain
Alide2_0137	PF02515	CoA-transferase family III
Alide2_0138	PF01796	Alide2_0138
Alide2_0138	PF12172	Rubredoxin-like zinc ribbon domain (DUF35_N)
Alide2_0139	PF02803	Thiolase, C-terminal domain
Alide2_0140	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0140	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0140	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0141	PF00501	AMP-binding enzyme
Alide2_0141	PF13193	AMP-binding enzyme C-terminal domain
Alide2_0142	PF01575	MaoC like domain
Alide2_0142	PF13452	N-terminal half of MaoC dehydratase
Alide2_0143	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_0144	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0145	PF01614	Bacterial transcriptional regulator
Alide2_0145	PF09339	IclR helix-turn-helix domain
Alide2_0146	PF07690	Major Facilitator Superfamily
Alide2_0147	PF03328	HpcH/HpaI aldolase/citrate lyase family
Alide2_0148	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0149	PF03972	MmgE/PrpD family
Alide2_0150	PF02515	CoA-transferase family III
Alide2_0151	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0151	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0151	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0152	PF13452	N-terminal half of MaoC dehydratase
Alide2_0153	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_0154	PF01575	MaoC like domain
Alide2_0154	PF13452	N-terminal half of MaoC dehydratase
Alide2_0155	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_0156	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
Alide2_0156	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
Alide2_0157	PF00108	Thiolase, N-terminal domain
Alide2_0157	PF02803	Thiolase, C-terminal domain
Alide2_0158	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0158	PF03466	LysR substrate binding domain
Alide2_0159	PF02515	CoA-transferase family III
Alide2_0160	PF00107	Zinc-binding dehydrogenase
Alide2_0160	PF08240	Alcohol dehydrogenase GroES-like domain
Alide2_0161	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0162	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0162	PF03466	LysR substrate binding domain
Alide2_0163	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0164	PF01546	Peptidase family M20/M25/M40
Alide2_0164	PF07687	Peptidase dimerisation domain
Alide2_0165	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0166	PF00501	AMP-binding enzyme
Alide2_0166	PF13193	AMP-binding enzyme C-terminal domain
Alide2_0167	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0168	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0169	PF01546	Peptidase family M20/M25/M40
Alide2_0169	PF07687	Peptidase dimerisation domain
Alide2_0170	PF01796	Alide2_0170
Alide2_0170	PF12172	Rubredoxin-like zinc ribbon domain (DUF35_N)
Alide2_0171	PF02803	Thiolase, C-terminal domain
Alide2_0172	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0172	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0172	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0173	PF03061	Thioesterase superfamily
Alide2_0174	PF09339	IclR helix-turn-helix domain
Alide2_0175	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0176	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_0177	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0177	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0177	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0178	PF01039	Carboxyl transferase domain
Alide2_0179	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0179	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0179	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0180	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_0181	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
Alide2_0181	PF00364	Biotin-requiring enzyme
Alide2_0181	PF02785	Biotin carboxylase C-terminal domain
Alide2_0181	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
Alide2_0182	PF07287	Alide2_0182
Alide2_0183	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0184	PF02515	CoA-transferase family III
Alide2_0185	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0185	PF03466	LysR substrate binding domain
Alide2_0186	PF02515	CoA-transferase family III
Alide2_0187	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0187	PF03466	LysR substrate binding domain
Alide2_0188	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0189	PF02515	CoA-transferase family III
Alide2_0190	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Alide2_0190	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
Alide2_0191	PF05232	Alide2_0191
Alide2_0192	PF06977	SdiA-regulated
Alide2_0193	PF00809	Pterin binding enzyme
Alide2_0193	PF02310	B12 binding domain
Alide2_0193	PF02607	B12 binding domain
Alide2_0193	PF02965	Vitamin B12 dependent methionine synthase, activation domain
Alide2_0194	PF13395	HNH endonuclease
Alide2_0195	PF01867	CRISPR associated protein Cas1
Alide2_0196	PF09827	CRISPR associated protein Cas2
Alide2_0198	PF03050	Alide2_0198
Alide2_0198	PF13005	Alide2_0198
Alide2_0198	PF13007	Alide2_0198
Alide2_0198	PF13817	Alide2_0198
Alide2_0199	PF05717	Alide2_0199
Alide2_0200	PF01527	Transposase
Alide2_0202	PF01695	IstB-like ATP binding protein
Alide2_0204	PF01202	Shikimate kinase
Alide2_0205	PF03631	Alide2_0205
Alide2_0206	PF05433	Alide2_0206
Alide2_0207	PF00175	Oxidoreductase NAD-binding domain
Alide2_0207	PF00970	Oxidoreductase FAD-binding domain
Alide2_0208	PF13458	Periplasmic binding protein
Alide2_0209	PF02653	Alide2_0209
Alide2_0210	PF00005	ABC transporter
Alide2_0210	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_0211	PF00112	Papain family cysteine protease
Alide2_0214	PF01078	Magnesium chelatase, subunit ChlI
Alide2_0214	PF13335	Alide2_0214
Alide2_0214	PF13541	Subunit ChlI of Mg-chelatase
Alide2_0215	PF09694	Alide2_0215
Alide2_0216	PF00543	Nitrogen regulatory protein P-II
Alide2_0217	PF00909	Ammonium Transporter Family
Alide2_0218	PF01527	Transposase
Alide2_0221	PF01695	IstB-like ATP binding protein
Alide2_0223	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
Alide2_0223	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
Alide2_0224	PF12697	Alpha/beta hydrolase family
Alide2_0226	PF05145	Alide2_0226
Alide2_0228	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0228	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0228	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0229	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0230	PF13380	CoA binding domain
Alide2_0230	PF13549	ATP-grasp domain
Alide2_0230	PF13607	Succinyl-CoA ligase like flavodoxin domain
Alide2_0231	PF01565	FAD binding domain
Alide2_0231	PF02913	FAD linked oxidases, C-terminal domain
Alide2_0232	PF06912	Alide2_0232
Alide2_0233	PF02754	Alide2_0233
Alide2_0233	PF12838	4Fe-4S dicluster domain
Alide2_0234	PF04352	ProQ/FINO family
Alide2_0235	PF00892	EamA-like transporter family
Alide2_0236	PF07690	Major Facilitator Superfamily
Alide2_0237	PF00842	Alanine racemase, C-terminal domain
Alide2_0237	PF01168	Alanine racemase, N-terminal domain
Alide2_0238	PF00034	Cytochrome c
Alide2_0238	PF03150	Di-haem cytochrome c peroxidase
Alide2_0239	PF02798	Glutathione S-transferase, N-terminal domain
Alide2_0239	PF14497	Glutathione S-transferase, C-terminal domain
Alide2_0240	PF13481	AAA domain
Alide2_0241	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0242	PF01425	Amidase
Alide2_0244	PF01063	Aminotransferase class IV
Alide2_0245	PF10276	Zinc-finger domain
Alide2_0246	PF04932	Alide2_0246
Alide2_0247	PF00534	Glycosyl transferases group 1
Alide2_0247	PF13439	Glycosyltransferase Family 4
Alide2_0248	PF00535	Glycosyl transferase family 2
Alide2_0249	PF05704	Alide2_0249
Alide2_0250	PF03060	Nitronate monooxygenase
Alide2_0251	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0251	PF03466	LysR substrate binding domain
Alide2_0252	PF06779	Alide2_0252
Alide2_0253	PF03473	MOSC domain
Alide2_0253	PF03475	3-alpha domain
Alide2_0254	PF00578	AhpC/TSA family
Alide2_0255	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
Alide2_0256	PF01575	MaoC like domain
Alide2_0257	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0258	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0258	PF03466	LysR substrate binding domain
Alide2_0259	PF02515	CoA-transferase family III
Alide2_0260	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_0260	PF00672	HAMP domain
Alide2_0260	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_0261	PF00072	Response regulator receiver domain
Alide2_0261	PF00486	Transcriptional regulatory protein, C terminal
Alide2_0262	PF07690	Major Facilitator Superfamily
Alide2_0263	PF07883	Cupin domain
Alide2_0263	PF12833	Helix-turn-helix domain
Alide2_0264	PF00892	EamA-like transporter family
Alide2_0265	PF01435	Peptidase family M48
Alide2_0268	PF00392	Bacterial regulatory proteins, gntR family
Alide2_0268	PF07729	FCD domain
Alide2_0269	PF00158	Sigma-54 interaction domain
Alide2_0269	PF02830	V4R domain
Alide2_0269	PF02954	Bacterial regulatory protein, Fis family
Alide2_0269	PF06505	Alide2_0269
Alide2_0270	PF06099	Alide2_0270
Alide2_0271	PF02332	Methane/Phenol/Toluene Hydroxylase
Alide2_0272	PF02406	MmoB/DmpM family
Alide2_0273	PF02332	Methane/Phenol/Toluene Hydroxylase
Alide2_0273	PF04945	YHS domain
Alide2_0274	PF04663	Phenol hydroxylase conserved region
Alide2_0275	PF00111	2Fe-2S iron-sulfur cluster binding domain
Alide2_0275	PF00175	Oxidoreductase NAD-binding domain
Alide2_0275	PF00970	Oxidoreductase FAD-binding domain
Alide2_0276	PF00111	2Fe-2S iron-sulfur cluster binding domain
Alide2_0277	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Alide2_0278	PF03928	Domain of unknown function (DUF336)
Alide2_0279	PF13557	Alide2_0279
Alide2_0280	PF00171	Aldehyde dehydrogenase family
Alide2_0281	PF00561	alpha/beta hydrolase fold
Alide2_0282	PF01557	Fumarylacetoacetate (FAA) hydrolase family
Alide2_0283	PF01118	Semialdehyde dehydrogenase, NAD binding domain
Alide2_0283	PF09290	Prokaryotic acetaldehyde dehydrogenase, dimerisation
Alide2_0284	PF00682	HMGL-like
Alide2_0284	PF07836	DmpG-like communication domain
Alide2_0285	PF01557	Fumarylacetoacetate (FAA) hydrolase family
Alide2_0286	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0287	PF01361	Tautomerase enzyme
Alide2_0288	PF00753	Metallo-beta-lactamase superfamily
Alide2_0289	PF01614	Bacterial transcriptional regulator
Alide2_0289	PF09339	IclR helix-turn-helix domain
Alide2_0290	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0291	PF04909	Amidohydrolase
Alide2_0292	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0293	PF03737	Demethylmenaquinone methyltransferase
Alide2_0294	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
Alide2_0294	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Alide2_0295	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0296	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0297	PF04909	Amidohydrolase
Alide2_0298	PF08450	SMP-30/Gluconolaconase/LRE-like region
Alide2_0299	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0300	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
Alide2_0300	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
Alide2_0301	PF00171	Aldehyde dehydrogenase family
Alide2_0302	PF01614	Bacterial transcriptional regulator
Alide2_0302	PF09339	IclR helix-turn-helix domain
Alide2_0304	PF00561	alpha/beta hydrolase fold
Alide2_0305	PF13458	Periplasmic binding protein
Alide2_0306	PF02653	Alide2_0306
Alide2_0307	PF02653	Alide2_0307
Alide2_0308	PF00005	ABC transporter
Alide2_0308	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_0309	PF00005	ABC transporter
Alide2_0310	PF04909	Amidohydrolase
Alide2_0311	PF00392	Bacterial regulatory proteins, gntR family
Alide2_0311	PF07729	FCD domain
Alide2_0312	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0312	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0312	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0313	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_0314	PF01636	Phosphotransferase enzyme family
Alide2_0315	PF03372	Endonuclease/Exonuclease/phosphatase family
Alide2_0316	PF00156	Phosphoribosyl transferase domain
Alide2_0318	PF02637	GatB domain
Alide2_0318	PF02934	GatB/GatE catalytic domain
Alide2_0319	PF01425	Amidase
Alide2_0320	PF02686	Glu-tRNAGln amidotransferase C subunit
Alide2_0321	PF06723	MreB/Mbl protein
Alide2_0322	PF04085	rod shape-determining protein MreC
Alide2_0323	PF04093	Alide2_0323
Alide2_0324	PF00905	Penicillin binding protein transpeptidase domain
Alide2_0324	PF03717	Penicillin-binding Protein dimerisation domain
Alide2_0325	PF00491	Arginase family
Alide2_0326	PF01925	Alide2_0326
Alide2_0327	PF00732	GMC oxidoreductase
Alide2_0327	PF05199	GMC oxidoreductase
Alide2_0328	PF02405	Alide2_0328
Alide2_0329	PF00005	ABC transporter
Alide2_0330	PF02470	Alide2_0330
Alide2_0331	PF03886	Protein of unknown function (DUF330)
Alide2_0333	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0333	PF03466	LysR substrate binding domain
Alide2_0334	PF00330	Aconitase family (aconitate hydratase)
Alide2_0334	PF00694	Aconitase C-terminal domain
Alide2_0335	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0336	PF03737	Demethylmenaquinone methyltransferase
Alide2_0337	PF01914	Alide2_0337
Alide2_0338	PF01738	Dienelactone hydrolase family
Alide2_0339	PF07690	Major Facilitator Superfamily
Alide2_0340	PF13533	Biotin-lipoyl like
Alide2_0340	PF16576	Alide2_0340
Alide2_0341	PF02321	Outer membrane efflux protein
Alide2_0342	PF12802	MarR family
Alide2_0343	PF01544	CorA-like Mg2+ transporter protein
Alide2_0344	PF00490	Delta-aminolevulinic acid dehydratase
Alide2_0346	PF03653	Alide2_0346
Alide2_0347	PF04892	Alide2_0347
Alide2_0349	PF12146	Putative lysophospholipase
Alide2_0350	PF00768	D-alanyl-D-alanine carboxypeptidase
Alide2_0350	PF07943	Penicillin-binding protein 5, C-terminal domain
Alide2_0351	PF00164	Ribosomal protein S12/S23
Alide2_0352	PF00177	Ribosomal protein S7p/S5e
Alide2_0353	PF00009	Elongation factor Tu GTP binding domain
Alide2_0353	PF00679	Elongation factor G C-terminus
Alide2_0353	PF03144	Elongation factor Tu domain 2
Alide2_0353	PF03764	Elongation factor G, domain IV
Alide2_0353	PF14492	Elongation Factor G, domain II
Alide2_0354	PF00009	Elongation factor Tu GTP binding domain
Alide2_0354	PF03143	Elongation factor Tu C-terminal domain
Alide2_0354	PF03144	Elongation factor Tu domain 2
Alide2_0355	PF00338	Ribosomal protein S10p/S20e
Alide2_0356	PF00297	Ribosomal protein L3
Alide2_0357	PF00573	Ribosomal protein L4/L1 family
Alide2_0358	PF00276	Ribosomal protein L23
Alide2_0359	PF00181	Ribosomal Proteins L2, RNA binding domain
Alide2_0359	PF03947	Ribosomal Proteins L2, C-terminal domain
Alide2_0360	PF00203	Ribosomal protein S19
Alide2_0361	PF00237	Ribosomal protein L22p/L17e
Alide2_0362	PF00189	Ribosomal protein S3, C-terminal domain
Alide2_0362	PF07650	KH domain
Alide2_0363	PF00252	Ribosomal protein L16p/L10e
Alide2_0364	PF00831	Ribosomal L29 protein
Alide2_0365	PF00366	Ribosomal protein S17
Alide2_0366	PF08534	Redoxin
Alide2_0367	PF00583	Acetyltransferase (GNAT) family
Alide2_0368	PF01292	Prokaryotic cytochrome b561
Alide2_0369	PF08534	Redoxin
Alide2_0371	PF03610	PTS system fructose IIA component
Alide2_0372	PF00381	PTS HPr component phosphorylation site
Alide2_0373	PF00391	PEP-utilising enzyme, mobile domain
Alide2_0373	PF02896	PEP-utilising enzyme, TIM barrel domain
Alide2_0373	PF05524	PEP-utilising enzyme, N-terminal
Alide2_0374	PF04055	Radical SAM superfamily
Alide2_0374	PF16881	Alide2_0374
Alide2_0375	PF03099	Biotin/lipoate A/B protein ligase family
Alide2_0376	PF04359	Protein of unknown function (DUF493)
Alide2_0377	PF03899	Alide2_0377
Alide2_0378	PF00119	ATP synthase A chain
Alide2_0379	PF00137	ATP synthase subunit C
Alide2_0380	PF00430	ATP synthase B/B' CF(0)
Alide2_0381	PF00213	ATP synthase delta (OSCP) subunit
Alide2_0382	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
Alide2_0382	PF00306	ATP synthase alpha/beta chain, C terminal domain
Alide2_0382	PF02874	ATP synthase alpha/beta family, beta-barrel domain
Alide2_0383	PF00231	ATP synthase
Alide2_0384	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
Alide2_0384	PF02874	ATP synthase alpha/beta family, beta-barrel domain
Alide2_0385	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
Alide2_0386	PF01527	Transposase
Alide2_0387	PF05717	Alide2_0387
Alide2_0388	PF03050	Alide2_0388
Alide2_0388	PF13005	Alide2_0388
Alide2_0388	PF13007	Alide2_0388
Alide2_0388	PF13817	Alide2_0388
Alide2_0392	PF04536	TLP18
Alide2_0393	PF04536	TLP18
Alide2_0394	PF04011	LemA family
Alide2_0395	PF13474	SnoaL-like domain
Alide2_0396	PF11161	Alide2_0396
Alide2_0397	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
Alide2_0398	PF02321	Outer membrane efflux protein
Alide2_0399	PF00873	AcrB/AcrD/AcrF family
Alide2_0400	PF00529	HlyD family secretion protein
Alide2_0400	PF16576	Alide2_0400
Alide2_0401	PF00440	Bacterial regulatory proteins, tetR family
Alide2_0401	PF08361	MAATS-type transcriptional repressor, C-terminal region
Alide2_0402	PF00009	Elongation factor Tu GTP binding domain
Alide2_0402	PF03143	Elongation factor Tu C-terminal domain
Alide2_0402	PF03144	Elongation factor Tu domain 2
Alide2_0403	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
Alide2_0404	PF00467	KOW motif
Alide2_0404	PF02357	Transcription termination factor nusG
Alide2_0405	PF00298	Ribosomal protein L11, RNA binding domain
Alide2_0405	PF03946	Ribosomal protein L11, N-terminal domain
Alide2_0406	PF00687	Ribosomal protein L1p/L10e family
Alide2_0407	PF00466	Ribosomal protein L10
Alide2_0408	PF00542	Ribosomal protein L7/L12 C-terminal domain
Alide2_0408	PF16320	Alide2_0408
Alide2_0409	PF00562	RNA polymerase Rpb2, domain 6
Alide2_0409	PF04560	RNA polymerase Rpb2, domain 7
Alide2_0409	PF04561	RNA polymerase Rpb2, domain 2
Alide2_0409	PF04563	RNA polymerase beta subunit
Alide2_0409	PF04565	RNA polymerase Rpb2, domain 3
Alide2_0409	PF10385	RNA polymerase beta subunit external 1 domain
Alide2_0410	PF00623	RNA polymerase Rpb1, domain 2
Alide2_0410	PF04983	RNA polymerase Rpb1, domain 3
Alide2_0410	PF04997	RNA polymerase Rpb1, domain 1
Alide2_0410	PF04998	RNA polymerase Rpb1, domain 5
Alide2_0410	PF05000	RNA polymerase Rpb1, domain 4
Alide2_0411	PF04011	LemA family
Alide2_0412	PF01029	NusB family
Alide2_0412	PF01189	NOL1/NOP2/sun family
Alide2_0413	PF14334	Alide2_0413
Alide2_0414	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_0414	PF00672	HAMP domain
Alide2_0414	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_0414	PF08448	PAS fold
Alide2_0415	PF00072	Response regulator receiver domain
Alide2_0415	PF02954	Bacterial regulatory protein, Fis family
Alide2_0416	PF05521	Phage head-tail joining protein
Alide2_0417	PF13276	Alide2_0417
Alide2_0417	PF13683	Alide2_0417
Alide2_0418	PF01527	Transposase
Alide2_0419	PF05135	Phage gp6-like head-tail connector protein
Alide2_0425	PF05065	Phage capsid family
Alide2_0426	PF13411	MerR HTH family regulatory protein
Alide2_0428	PF13481	AAA domain
Alide2_0429	PF01807	CHC2 zinc finger
Alide2_0430	PF05930	Prophage CP4-57 regulatory protein (AlpA)
Alide2_0433	PF00589	Phage integrase family
Alide2_0433	PF13356	Domain of unknown function (DUF4102)
Alide2_0437	PF13358	DDE superfamily endonuclease
Alide2_0437	PF13565	Alide2_0437
Alide2_0439	PF01370	NAD dependent epimerase/dehydratase family
Alide2_0440	PF13231	Alide2_0440
Alide2_0441	PF00535	Glycosyl transferase family 2
Alide2_0442	PF03706	Alide2_0442
Alide2_0443	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
Alide2_0444	PF02021	Uncharacterised protein family UPF0102
Alide2_0445	PF13580	SIS domain
Alide2_0446	PF04972	BON domain
Alide2_0447	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
Alide2_0447	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
Alide2_0448	PF00437	Type II/IV secretion system protein
Alide2_0449	PF00027	Cyclic nucleotide-binding domain
Alide2_0450	PF00437	Type II/IV secretion system protein
Alide2_0451	PF01168	Alanine racemase, N-terminal domain
Alide2_0452	PF00266	Aminotransferase class-V
Alide2_0454	PF04286	Alide2_0454
Alide2_0455	PF01565	FAD binding domain
Alide2_0455	PF02913	FAD linked oxidases, C-terminal domain
Alide2_0456	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0456	PF03466	LysR substrate binding domain
Alide2_0457	PF00551	Formyl transferase
Alide2_0458	PF00563	EAL domain
Alide2_0458	PF00990	GGDEF domain
Alide2_0458	PF08447	PAS fold
Alide2_0458	PF08448	PAS fold
Alide2_0458	PF13426	PAS domain
Alide2_0459	PF04187	Protein of unknown function, DUF399
Alide2_0460	PF02867	Ribonucleotide reductase, barrel domain
Alide2_0461	PF00672	HAMP domain
Alide2_0461	PF01590	GAF domain
Alide2_0461	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_0461	PF07730	Histidine kinase
Alide2_0461	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
Alide2_0462	PF00072	Response regulator receiver domain
Alide2_0462	PF00196	Bacterial regulatory proteins, luxR family
Alide2_0463	PF07690	Major Facilitator Superfamily
Alide2_0464	PF07690	Major Facilitator Superfamily
Alide2_0465	PF00384	Molybdopterin oxidoreductase
Alide2_0465	PF01568	Molydopterin dinucleotide binding domain
Alide2_0465	PF14710	Respiratory nitrate reductase alpha N-terminal
Alide2_0466	PF13247	4Fe-4S dicluster domain
Alide2_0466	PF14711	Respiratory nitrate reductase beta C-terminal
Alide2_0467	PF02613	Nitrate reductase delta subunit
Alide2_0468	PF02665	Nitrate reductase gamma subunit
Alide2_0469	PF00639	PPIC-type PPIASE domain
Alide2_0470	PF00484	Carbonic anhydrase
Alide2_0471	PF00881	Nitroreductase family
Alide2_0473	PF01814	Hemerythrin HHE cation binding domain
Alide2_0474	PF12091	Alide2_0474
Alide2_0475	PF11306	Protein of unknown function (DUF3108)
Alide2_0476	PF01557	Fumarylacetoacetate (FAA) hydrolase family
Alide2_0477	PF13414	TPR repeat
Alide2_0477	PF13432	Tetratricopeptide repeat
Alide2_0477	PF13844	Glycosyl transferase family 41
Alide2_0478	PF00384	Molybdopterin oxidoreductase
Alide2_0478	PF01568	Molydopterin dinucleotide binding domain
Alide2_0478	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
Alide2_0479	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0480	PF03328	HpcH/HpaI aldolase/citrate lyase family
Alide2_0481	PF02515	CoA-transferase family III
Alide2_0482	PF01575	MaoC like domain
Alide2_0483	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0483	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0483	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0484	PF01575	MaoC like domain
Alide2_0485	PF03972	MmgE/PrpD family
Alide2_0486	PF03328	HpcH/HpaI aldolase/citrate lyase family
Alide2_0487	PF01614	Bacterial transcriptional regulator
Alide2_0487	PF09339	IclR helix-turn-helix domain
Alide2_0488	PF01546	Peptidase family M20/M25/M40
Alide2_0488	PF07687	Peptidase dimerisation domain
Alide2_0489	PF00887	Acyl CoA binding protein
Alide2_0490	PF10023	Alide2_0490
Alide2_0491	PF03352	Methyladenine glycosylase
Alide2_0493	PF02353	Mycolic acid cyclopropane synthetase
Alide2_0494	PF08895	Alide2_0494
Alide2_0495	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0496	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0497	PF00501	AMP-binding enzyme
Alide2_0498	PF00005	ABC transporter
Alide2_0499	PF13458	Periplasmic binding protein
Alide2_0500	PF02653	Alide2_0500
Alide2_0501	PF02653	Alide2_0501
Alide2_0502	PF00005	ABC transporter
Alide2_0502	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_0503	PF00501	AMP-binding enzyme
Alide2_0504	PF13401	AAA domain
Alide2_0505	PF16537	Alide2_0505
Alide2_0506	PF00027	Cyclic nucleotide-binding domain
Alide2_0506	PF13545	Crp-like helix-turn-helix domain
Alide2_0507	PF00849	RNA pseudouridylate synthase
Alide2_0507	PF01479	S4 domain
Alide2_0508	PF00183	Hsp90 protein
Alide2_0508	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_0510	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0511	PF01636	Phosphotransferase enzyme family
Alide2_0512	PF00069	Protein kinase domain
Alide2_0512	PF00582	Universal stress protein family
Alide2_0513	PF12850	Calcineurin-like phosphoesterase superfamily domain
Alide2_0514	PF02515	CoA-transferase family III
Alide2_0517	PF03328	HpcH/HpaI aldolase/citrate lyase family
Alide2_0518	PF01557	Fumarylacetoacetate (FAA) hydrolase family
Alide2_0519	PF01557	Fumarylacetoacetate (FAA) hydrolase family
Alide2_0520	PF04909	Amidohydrolase
Alide2_0521	PF01042	Endoribonuclease L-PSP
Alide2_0522	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0523	PF01613	Flavin reductase like domain
Alide2_0524	PF01614	Bacterial transcriptional regulator
Alide2_0524	PF09339	IclR helix-turn-helix domain
Alide2_0525	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
Alide2_0525	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Alide2_0526	PF00732	GMC oxidoreductase
Alide2_0526	PF05199	GMC oxidoreductase
Alide2_0529	PF01061	Alide2_0529
Alide2_0530	PF00005	ABC transporter
Alide2_0531	PF07519	Tannase and feruloyl esterase
Alide2_0532	PF01048	Phosphorylase superfamily
Alide2_0532	PF10423	Bacterial AMP nucleoside phosphorylase N-terminus
Alide2_0533	PF00563	EAL domain
Alide2_0533	PF00990	GGDEF domain
Alide2_0533	PF08448	PAS fold
Alide2_0533	PF13426	PAS domain
Alide2_0534	PF01545	Cation efflux family
Alide2_0534	PF16916	Alide2_0534
Alide2_0535	PF02580	D-Tyr-tRNA(Tyr) deacylase
Alide2_0536	PF01925	Alide2_0536
Alide2_0537	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0537	PF03466	LysR substrate binding domain
Alide2_0538	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0539	PF02515	CoA-transferase family III
Alide2_0540	PF00107	Zinc-binding dehydrogenase
Alide2_0541	PF00501	AMP-binding enzyme
Alide2_0541	PF13193	AMP-binding enzyme C-terminal domain
Alide2_0542	PF02130	Uncharacterized protein family UPF0054
Alide2_0543	PF02562	PhoH-like protein
Alide2_0544	PF01330	RuvA N terminal domain
Alide2_0544	PF07499	RuvA, C-terminal domain
Alide2_0544	PF14520	Helix-hairpin-helix domain
Alide2_0546	PF00012	Hsp70 protein
Alide2_0546	PF12531	Alide2_0546
Alide2_0547	PF00012	Hsp70 protein
Alide2_0548	PF10816	Alide2_0548
Alide2_0549	PF05491	Holliday junction DNA helicase ruvB C-terminus
Alide2_0549	PF05496	Holliday junction DNA helicase ruvB N-terminus
Alide2_0550	PF02308	Alide2_0550
Alide2_0553	PF01168	Alanine racemase, N-terminal domain
Alide2_0553	PF14031	Putative serine dehydratase domain
Alide2_0554	PF00300	Histidine phosphatase superfamily (branch 1)
Alide2_0555	PF13590	Domain of unknown function (DUF4136)
Alide2_0556	PF01171	PP-loop family
Alide2_0557	PF02152	Dihydroneopterin aldolase
Alide2_0558	PF02152	Dihydroneopterin aldolase
Alide2_0559	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_0560	PF02636	Putative S-adenosyl-L-methionine-dependent methyltransferase
Alide2_0561	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Alide2_0562	PF11146	Alide2_0562
Alide2_0563	PF00480	ROK family
Alide2_0564	PF00982	Glycosyltransferase family 20
Alide2_0565	PF00723	Glycosyl hydrolases family 15
Alide2_0566	PF02358	Trehalose-phosphatase
Alide2_0567	PF00085	Thioredoxin
Alide2_0568	PF01743	Poly A polymerase head domain
Alide2_0568	PF01966	HD domain
Alide2_0568	PF12627	Probable RNA and SrmB- binding site of polymerase A
Alide2_0569	PF00158	Sigma-54 interaction domain
Alide2_0569	PF02954	Bacterial regulatory protein, Fis family
Alide2_0570	PF07287	Alide2_0570
Alide2_0571	PF14330	Alide2_0571
Alide2_0572	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0573	PF00149	Calcineurin-like phosphoesterase
Alide2_0574	PF13410	Glutathione S-transferase, C-terminal domain
Alide2_0574	PF13417	Glutathione S-transferase, N-terminal domain
Alide2_0575	PF01812	5-formyltetrahydrofolate cyclo-ligase family
Alide2_0576	PF01464	Transglycosylase SLT domain
Alide2_0577	PF01292	Prokaryotic cytochrome b561
Alide2_0578	PF13670	Alide2_0578
Alide2_0579	PF13640	2OG-Fe(II) oxygenase superfamily
Alide2_0580	PF01070	FMN-dependent dehydrogenase
Alide2_0581	PF00593	TonB dependent receptor
Alide2_0581	PF07715	TonB-dependent Receptor Plug Domain
Alide2_0582	PF00753	Metallo-beta-lactamase superfamily
Alide2_0583	PF00501	AMP-binding enzyme
Alide2_0583	PF13193	AMP-binding enzyme C-terminal domain
Alide2_0584	PF12697	Alpha/beta hydrolase family
Alide2_0585	PF00109	Beta-ketoacyl synthase, N-terminal domain
Alide2_0585	PF02801	Beta-ketoacyl synthase, C-terminal domain
Alide2_0586	PF07977	FabA-like domain
Alide2_0587	PF00795	Carbon-nitrogen hydrolase
Alide2_0588	PF00571	CBS domain
Alide2_0588	PF03471	Transporter associated domain
Alide2_0589	PF00583	Acetyltransferase (GNAT) family
Alide2_0590	PF01037	AsnC family
Alide2_0590	PF13404	AsnC-type helix-turn-helix domain
Alide2_0591	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Alide2_0591	PF14696	Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal
Alide2_0592	PF00351	Biopterin-dependent aromatic amino acid hydroxylase
Alide2_0593	PF00676	Dehydrogenase E1 component
Alide2_0593	PF12573	2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal
Alide2_0594	PF02779	Transketolase, pyrimidine binding domain
Alide2_0594	PF02780	Transketolase, C-terminal domain
Alide2_0595	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Alide2_0595	PF00364	Biotin-requiring enzyme
Alide2_0595	PF02817	e3 binding domain
Alide2_0596	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Alide2_0596	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_0597	PF02091	Glycyl-tRNA synthetase alpha subunit
Alide2_0598	PF02092	Alide2_0598
Alide2_0598	PF05746	DALR anticodon binding domain
Alide2_0599	PF08645	Polynucleotide kinase 3 phosphatase
Alide2_0600	PF01553	Acyltransferase
Alide2_0601	PF01863	Protein of unknown function DUF45
Alide2_0602	PF00581	Rhodanese-like domain
Alide2_0603	PF01476	LysM domain
Alide2_0603	PF04972	BON domain
Alide2_0604	PF03309	Type III pantothenate kinase
Alide2_0605	PF00440	Bacterial regulatory proteins, tetR family
Alide2_0605	PF13972	Bacterial transcriptional repressor
Alide2_0606	PF05597	Alide2_0606
Alide2_0607	PF16363	Alide2_0607
Alide2_0608	PF04321	RmlD substrate binding domain
Alide2_0609	PF00483	Nucleotidyl transferase
Alide2_0610	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
Alide2_0611	PF00534	Glycosyl transferases group 1
Alide2_0611	PF09314	Alide2_0611
Alide2_0612	PF13641	Glycosyltransferase like family 2
Alide2_0613	PF00437	Type II/IV secretion system protein
Alide2_0613	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
Alide2_0614	PF00482	Type II secretion system (T2SS), protein F
Alide2_0615	PF07963	Prokaryotic N-terminal methylation motif
Alide2_0615	PF08334	Type II secretion system (T2SS), protein G
Alide2_0616	PF07963	Prokaryotic N-terminal methylation motif
Alide2_0617	PF07963	Prokaryotic N-terminal methylation motif
Alide2_0618	PF07963	Prokaryotic N-terminal methylation motif
Alide2_0619	PF03934	Type II secretion system (T2SS), protein K
Alide2_0620	PF05137	Alide2_0620
Alide2_0621	PF10741	Alide2_0621
Alide2_0624	PF13358	DDE superfamily endonuclease
Alide2_0624	PF13565	Alide2_0624
Alide2_0625	PF13692	Glycosyl transferases group 1
Alide2_0626	PF01061	Alide2_0626
Alide2_0627	PF00005	ABC transporter
Alide2_0627	PF14524	Wzt C-terminal domain
Alide2_0629	PF13489	Methyltransferase domain
Alide2_0630	PF01464	Transglycosylase SLT domain
Alide2_0630	PF13511	Alide2_0630
Alide2_0631	PF00953	Glycosyl transferase family 4
Alide2_0632	PF00696	Amino acid kinase family
Alide2_0633	PF00440	Bacterial regulatory proteins, tetR family
Alide2_0634	PF00440	Bacterial regulatory proteins, tetR family
Alide2_0635	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_0635	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_0635	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_0635	PF12418	Alide2_0635
Alide2_0635	PF12806	Alide2_0635
Alide2_0636	PF09917	Uncharacterized protein conserved in bacteria (DUF2147)
Alide2_0637	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_0637	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
Alide2_0637	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Alide2_0638	PF00108	Thiolase, N-terminal domain
Alide2_0638	PF02803	Thiolase, C-terminal domain
Alide2_0639	PF13622	Thioesterase-like superfamily
Alide2_0640	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_0641	PF04519	Alide2_0641
Alide2_0642	PF03061	Thioesterase superfamily
Alide2_0643	PF00005	ABC transporter
Alide2_0643	PF00664	ABC transporter transmembrane region
Alide2_0644	PF12643	Alide2_0644
Alide2_0645	PF03480	Bacterial extracellular solute-binding protein, family 7
Alide2_0646	PF06808	Alide2_0646
Alide2_0647	PF04290	Alide2_0647
Alide2_0648	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0648	PF03466	LysR substrate binding domain
Alide2_0649	PF00497	Bacterial extracellular solute-binding proteins, family 3
Alide2_0650	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_0651	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_0652	PF00005	ABC transporter
Alide2_0653	PF02423	Ornithine cyclodeaminase/mu-crystallin family
Alide2_0654	PF08282	haloacid dehalogenase-like hydrolase
Alide2_0655	PF00009	Elongation factor Tu GTP binding domain
Alide2_0655	PF03144	Elongation factor Tu domain 2
Alide2_0655	PF16658	Alide2_0655
Alide2_0656	PF00106	short chain dehydrogenase
Alide2_0657	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
Alide2_0657	PF05221	S-adenosyl-L-homocysteine hydrolase
Alide2_0658	PF01728	FtsJ-like methyltransferase
Alide2_0659	PF02219	Methylenetetrahydrofolate reductase
Alide2_0660	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
Alide2_0661	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
Alide2_0662	PF00069	Protein kinase domain
Alide2_0663	PF00572	Ribosomal protein L13
Alide2_0664	PF00380	Ribosomal protein S9/S16
Alide2_0665	PF01521	Iron-sulphur cluster biosynthesis
Alide2_0666	PF03702	Uncharacterised protein family (UPF0075)
Alide2_0667	PF01551	Peptidase family M23
Alide2_0668	PF00579	tRNA synthetases class I (W and Y)
Alide2_0668	PF01479	S4 domain
Alide2_0669	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0669	PF03466	LysR substrate binding domain
Alide2_0670	PF00132	Bacterial transferase hexapeptide (six repeats)
Alide2_0670	PF12804	MobA-like NTP transferase domain
Alide2_0671	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_0672	PF13591	MerR HTH family regulatory protein
Alide2_0673	PF00226	DnaJ domain
Alide2_0673	PF01556	DnaJ C terminal domain
Alide2_0674	PF01037	AsnC family
Alide2_0674	PF13404	AsnC-type helix-turn-helix domain
Alide2_0675	PF01380	SIS domain
Alide2_0675	PF13522	Glutamine amidotransferase domain
Alide2_0676	PF01695	IstB-like ATP binding protein
Alide2_0677	PF00665	Integrase core domain
Alide2_0679	PF05717	Alide2_0679
Alide2_0680	PF01527	Transposase
Alide2_0682	PF00174	Oxidoreductase molybdopterin binding domain
Alide2_0683	PF01292	Prokaryotic cytochrome b561
Alide2_0684	PF00072	Response regulator receiver domain
Alide2_0684	PF00486	Transcriptional regulatory protein, C terminal
Alide2_0685	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_0685	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_0687	PF00092	von Willebrand factor type A domain
Alide2_0687	PF07589	Alide2_0687
Alide2_0688	PF00483	Nucleotidyl transferase
Alide2_0688	PF01050	Mannose-6-phosphate isomerase
Alide2_0689	PF02563	Polysaccharide biosynthesis/export protein
Alide2_0689	PF10531	SLBB domain
Alide2_0690	PF13807	Alide2_0690
Alide2_0691	PF13614	AAA domain
Alide2_0693	PF13401	AAA domain
Alide2_0694	PF01522	Polysaccharide deacetylase
Alide2_0694	PF11959	Alide2_0694
Alide2_0695	PF13480	Acetyltransferase (GNAT) domain
Alide2_0696	PF13692	Glycosyl transferases group 1
Alide2_0697	PF09721	Alide2_0697
Alide2_0697	PF11984	Alide2_0697
Alide2_0698	PF00733	Asparagine synthase
Alide2_0698	PF13537	Glutamine amidotransferase domain
Alide2_0699	PF00534	Glycosyl transferases group 1
Alide2_0699	PF13439	Glycosyltransferase Family 4
Alide2_0700	PF00534	Glycosyl transferases group 1
Alide2_0700	PF13579	Glycosyl transferase 4-like domain
Alide2_0701	PF00534	Glycosyl transferases group 1
Alide2_0701	PF13439	Glycosyltransferase Family 4
Alide2_0702	PF13231	Alide2_0702
Alide2_0704	PF04932	Alide2_0704
Alide2_0705	PF01522	Polysaccharide deacetylase
Alide2_0706	PF01522	Polysaccharide deacetylase
Alide2_0707	PF13480	Acetyltransferase (GNAT) domain
Alide2_0708	PF00535	Glycosyl transferase family 2
Alide2_0709	PF13440	Alide2_0709
Alide2_0709	PF14667	Polysaccharide biosynthesis C-terminal domain
Alide2_0710	PF01370	NAD dependent epimerase/dehydratase family
Alide2_0711	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
Alide2_0711	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
Alide2_0711	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
Alide2_0713	PF13480	Acetyltransferase (GNAT) domain
Alide2_0714	PF07589	Alide2_0714
Alide2_0714	PF13448	Alide2_0714
Alide2_0715	PF12697	Alpha/beta hydrolase family
Alide2_0716	PF12146	Putative lysophospholipase
Alide2_0717	PF00550	Phosphopantetheine attachment site
Alide2_0718	PF00501	AMP-binding enzyme
Alide2_0718	PF13193	AMP-binding enzyme C-terminal domain
Alide2_0719	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
Alide2_0719	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
Alide2_0720	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_0721	PF00072	Response regulator receiver domain
Alide2_0721	PF00158	Sigma-54 interaction domain
Alide2_0721	PF02954	Bacterial regulatory protein, Fis family
Alide2_0722	PF13432	Tetratricopeptide repeat
Alide2_0722	PF14559	Tetratricopeptide repeat
Alide2_0723	PF13365	Trypsin-like peptidase domain
Alide2_0725	PF01040	UbiA prenyltransferase family
Alide2_0725	PF12710	haloacid dehalogenase-like hydrolase
Alide2_0726	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0726	PF03466	LysR substrate binding domain
Alide2_0727	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0729	PF01176	Translation initiation factor 1A / IF-1
Alide2_0730	PF13532	2OG-Fe(II) oxygenase superfamily
Alide2_0731	PF00501	AMP-binding enzyme
Alide2_0731	PF13193	AMP-binding enzyme C-terminal domain
Alide2_0732	PF00175	Oxidoreductase NAD-binding domain
Alide2_0734	PF13539	D-alanyl-D-alanine carboxypeptidase
Alide2_0735	PF01323	DSBA-like thioredoxin domain
Alide2_0736	PF05981	Alide2_0736
Alide2_0737	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
Alide2_0737	PF02875	Mur ligase family, glutamate ligase domain
Alide2_0737	PF08245	Mur ligase middle domain
Alide2_0738	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
Alide2_0739	PF00005	ABC transporter
Alide2_0739	PF00664	ABC transporter transmembrane region
Alide2_0740	PF08909	Alide2_0740
Alide2_0742	PF00009	Elongation factor Tu GTP binding domain
Alide2_0742	PF00679	Elongation factor G C-terminus
Alide2_0742	PF03764	Elongation factor G, domain IV
Alide2_0742	PF14492	Elongation Factor G, domain II
Alide2_0743	PF06189	Alide2_0743
Alide2_0744	PF00482	Type II secretion system (T2SS), protein F
Alide2_0745	PF00296	Luciferase-like monooxygenase
Alide2_0746	PF13682	Chemoreceptor zinc-binding domain
Alide2_0747	PF00437	Type II/IV secretion system protein
Alide2_0748	PF00263	Alide2_0748
Alide2_0748	PF03958	Bacterial type II/III secretion system short domain
Alide2_0749	PF01203	Alide2_0749
Alide2_0750	PF04612	Type II secretion system (T2SS), protein M
Alide2_0751	PF05134	Type II secretion system (T2SS), protein L
Alide2_0751	PF12693	GspL periplasmic domain
Alide2_0752	PF03934	Type II secretion system (T2SS), protein K
Alide2_0753	PF07963	Prokaryotic N-terminal methylation motif
Alide2_0754	PF02501	Type II secretion system (T2SS), protein I
Alide2_0754	PF07963	Prokaryotic N-terminal methylation motif
Alide2_0755	PF07963	Prokaryotic N-terminal methylation motif
Alide2_0756	PF07963	Prokaryotic N-terminal methylation motif
Alide2_0756	PF08334	Type II secretion system (T2SS), protein G
Alide2_0757	PF11356	Type IV pilus biogenesis
Alide2_0758	PF00300	Histidine phosphatase superfamily (branch 1)
Alide2_0759	PF02654	Alide2_0759
Alide2_0760	PF00291	Pyridoxal-phosphate dependent enzyme
Alide2_0760	PF00585	C-terminal regulatory domain of Threonine dehydratase
Alide2_0761	PF02566	OsmC-like protein
Alide2_0762	PF03232	Alide2_0762
Alide2_0763	PF13609	Gram-negative porin
Alide2_0764	PF13609	Gram-negative porin
Alide2_0765	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_0766	PF01546	Peptidase family M20/M25/M40
Alide2_0766	PF07687	Peptidase dimerisation domain
Alide2_0767	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_0767	PF12911	Alide2_0767
Alide2_0768	PF00005	ABC transporter
Alide2_0768	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
Alide2_0769	PF00005	ABC transporter
Alide2_0769	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
Alide2_0770	PF01161	Phosphatidylethanolamine-binding protein
Alide2_0771	PF01380	SIS domain
Alide2_0771	PF01418	Helix-turn-helix domain, rpiR family
Alide2_0772	PF00923	Transaldolase
Alide2_0773	PF00342	Phosphoglucose isomerase
Alide2_0774	PF00118	TCP-1/cpn60 chaperonin family
Alide2_0775	PF00166	Chaperonin 10 Kd subunit
Alide2_0776	PF00293	NUDIX domain
Alide2_0776	PF01467	Cytidylyltransferase
Alide2_0777	PF00438	S-adenosylmethionine synthetase, N-terminal domain
Alide2_0777	PF02772	S-adenosylmethionine synthetase, central domain
Alide2_0777	PF02773	S-adenosylmethionine synthetase, C-terminal domain
Alide2_0778	PF03279	Alide2_0778
Alide2_0779	PF03279	Alide2_0779
Alide2_0780	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0780	PF03466	LysR substrate binding domain
Alide2_0781	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0782	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0783	PF00180	Isocitrate/isopropylmalate dehydrogenase
Alide2_0784	PF04909	Amidohydrolase
Alide2_0785	PF01926	50S ribosome-binding GTPase
Alide2_0786	PF00034	Cytochrome c
Alide2_0787	PF05140	Alide2_0787
Alide2_0788	PF01578	Alide2_0788
Alide2_0789	PF00174	Oxidoreductase molybdopterin binding domain
Alide2_0790	PF01794	Alide2_0790
Alide2_0791	PF00753	Metallo-beta-lactamase superfamily
Alide2_0792	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
Alide2_0792	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
Alide2_0793	PF13627	Alide2_0793
Alide2_0794	PF01491	Frataxin-like domain
Alide2_0795	PF00905	Penicillin binding protein transpeptidase domain
Alide2_0795	PF00912	Transglycosylase
Alide2_0795	PF17092	Alide2_0795
Alide2_0796	PF11104	Type IV pilus assembly protein PilM;
Alide2_0797	PF05137	Alide2_0797
Alide2_0798	PF04350	Pilus assembly protein, PilO
Alide2_0799	PF04351	Pilus assembly protein, PilP
Alide2_0800	PF00263	Alide2_0800
Alide2_0800	PF03958	Bacterial type II/III secretion system short domain
Alide2_0800	PF11741	AMIN domain
Alide2_0801	PF05345	Putative Ig domain
Alide2_0802	PF01761	3-dehydroquinate synthase
Alide2_0803	PF01966	HD domain
Alide2_0803	PF13286	Phosphohydrolase-associated domain
Alide2_0804	PF07209	Alide2_0804
Alide2_0805	PF13679	Alide2_0805
Alide2_0806	PF00171	Aldehyde dehydrogenase family
Alide2_0807	PF13458	Periplasmic binding protein
Alide2_0809	PF01797	Transposase IS200 like
Alide2_0810	PF00310	Glutamine amidotransferases class-II
Alide2_0810	PF01493	GXGXG motif
Alide2_0810	PF01645	Conserved region in glutamate synthase
Alide2_0810	PF04898	Glutamate synthase central domain
Alide2_0811	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_0811	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
Alide2_0812	PF00497	Bacterial extracellular solute-binding proteins, family 3
Alide2_0813	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_0814	PF00005	ABC transporter
Alide2_0815	PF11902	Alide2_0815
Alide2_0816	PF01564	Spermine/spermidine synthase
Alide2_0816	PF17284	Alide2_0816
Alide2_0817	PF02675	S-adenosylmethionine decarboxylase
Alide2_0818	PF00005	ABC transporter
Alide2_0819	PF02405	Alide2_0819
Alide2_0820	PF02470	Alide2_0820
Alide2_0821	PF04333	Alide2_0821
Alide2_0822	PF05494	Toluene tolerance, Ttg2
Alide2_0823	PF13466	STAS domain
Alide2_0824	PF00990	GGDEF domain
Alide2_0824	PF08448	PAS fold
Alide2_0825	PF00005	ABC transporter
Alide2_0826	PF01061	Alide2_0826
Alide2_0827	PF01722	BolA-like protein
Alide2_0828	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Alide2_0829	PF01634	ATP phosphoribosyltransferase
Alide2_0830	PF00815	Histidinol dehydrogenase
Alide2_0833	PF00155	Aminotransferase class I and II
Alide2_0834	PF00475	Imidazoleglycerol-phosphate dehydratase
Alide2_0835	PF00117	Glutamine amidotransferase class-I
Alide2_0836	PF00977	Histidine biosynthesis protein
Alide2_0837	PF12138	Alide2_0837
Alide2_0838	PF16933	Alide2_0838
Alide2_0839	PF00534	Glycosyl transferases group 1
Alide2_0839	PF11997	Alide2_0839
Alide2_0841	PF16963	Alide2_0841
Alide2_0843	PF13429	Tetratricopeptide repeat
Alide2_0843	PF14559	Tetratricopeptide repeat
Alide2_0844	PF03537	Glycoside-hydrolase family GH114
Alide2_0845	PF16363	Alide2_0845
Alide2_0846	PF00977	Histidine biosynthesis protein
Alide2_0847	PF01502	Phosphoribosyl-AMP cyclohydrolase
Alide2_0848	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
Alide2_0850	PF01734	Patatin-like phospholipase
Alide2_0851	PF11969	Scavenger mRNA decapping enzyme C-term binding
Alide2_0852	PF02416	mttA/Hcf106 family
Alide2_0853	PF02416	mttA/Hcf106 family
Alide2_0854	PF00902	Sec-independent protein translocase protein (TatC)
Alide2_0855	PF13180	PDZ domain
Alide2_0855	PF13365	Trypsin-like peptidase domain
Alide2_0856	PF01784	NIF3 (NGG1p interacting factor 3)
Alide2_0857	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
Alide2_0858	PF01741	Large-conductance mechanosensitive channel, MscL
Alide2_0859	PF00355	Rieske [2Fe-2S] domain
Alide2_0859	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
Alide2_0860	PF00032	Cytochrome b(C-terminal)/b6/petD
Alide2_0860	PF00033	Cytochrome b(N-terminal)/b6/petB
Alide2_0861	PF02167	Cytochrome C1 family
Alide2_0862	PF00043	Glutathione S-transferase, C-terminal domain
Alide2_0862	PF13417	Glutathione S-transferase, N-terminal domain
Alide2_0863	PF04386	Stringent starvation protein B
Alide2_0865	PF01043	SecA preprotein cross-linking domain
Alide2_0865	PF02810	SEC-C motif
Alide2_0865	PF07516	SecA Wing and Scaffold domain
Alide2_0865	PF07517	SecA DEAD-like domain
Alide2_0866	PF01960	ArgJ family
Alide2_0867	PF05673	Protein of unknown function (DUF815)
Alide2_0868	PF00293	NUDIX domain
Alide2_0869	PF03884	Domain of unknown function (DUF329)
Alide2_0870	PF07072	Protein of unknown function (DUF1342)
Alide2_0871	PF01121	Dephospho-CoA kinase
Alide2_0872	PF01478	Type IV leader peptidase family
Alide2_0872	PF06750	Alide2_0872
Alide2_0873	PF00482	Type II secretion system (T2SS), protein F
Alide2_0874	PF00437	Type II/IV secretion system protein
Alide2_0874	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
Alide2_0875	PF00589	Phage integrase family
Alide2_0876	PF01381	Helix-turn-helix
Alide2_0877	PF08843	Nucleotidyl transferase of unknown function (DUF1814)
Alide2_0878	PF13560	Helix-turn-helix domain
Alide2_0881	PF01695	IstB-like ATP binding protein
Alide2_0882	PF00665	Integrase core domain
Alide2_0883	PF13280	Alide2_0883
Alide2_0886	PF00665	Integrase core domain
Alide2_0886	PF13276	Alide2_0886
Alide2_0887	PF01527	Transposase
Alide2_0888	PF00348	Polyprenyl synthetase
Alide2_0889	PF00829	Ribosomal prokaryotic L21 protein
Alide2_0890	PF01016	Ribosomal L27 protein
Alide2_0891	PF01018	GTP1/OBG
Alide2_0891	PF01926	50S ribosome-binding GTPase
Alide2_0892	PF00696	Amino acid kinase family
Alide2_0892	PF01472	PUA domain
Alide2_0893	PF00293	NUDIX domain
Alide2_0894	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
Alide2_0894	PF03129	Anticodon binding domain
Alide2_0894	PF04073	Aminoacyl-tRNA editing domain
Alide2_0895	PF01464	Transglycosylase SLT domain
Alide2_0896	PF00571	CBS domain
Alide2_0896	PF01595	Alide2_0896
Alide2_0896	PF03471	Transporter associated domain
Alide2_0897	PF00004	ATPase family associated with various cellular activities (AAA)
Alide2_0898	PF00462	Glutaredoxin
Alide2_0899	PF05175	Methyltransferase small domain
Alide2_0900	PF00472	RF-1 domain
Alide2_0900	PF03462	PCRF domain
Alide2_0901	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
Alide2_0901	PF01488	Shikimate / quinate 5-dehydrogenase
Alide2_0901	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
Alide2_0903	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0903	PF03466	LysR substrate binding domain
Alide2_0904	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0905	PF05013	N-formylglutamate amidohydrolase
Alide2_0906	PF00924	Mechanosensitive ion channel
Alide2_0906	PF12607	Alide2_0906
Alide2_0907	PF03009	Glycerophosphoryl diester phosphodiesterase family
Alide2_0908	PF00005	ABC transporter
Alide2_0908	PF08402	TOBE domain
Alide2_0909	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_0910	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_0911	PF13416	Bacterial extracellular solute-binding protein
Alide2_0912	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
Alide2_0912	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Alide2_0913	PF01565	FAD binding domain
Alide2_0913	PF02754	Alide2_0913
Alide2_0913	PF02913	FAD linked oxidases, C-terminal domain
Alide2_0913	PF11880	Alide2_0913
Alide2_0913	PF12447	Alide2_0913
Alide2_0913	PF13183	4Fe-4S dicluster domain
Alide2_0914	PF01230	HIT domain
Alide2_0915	PF06155	Protein of unknown function (DUF971)
Alide2_0916	PF01209	ubiE/COQ5 methyltransferase family
Alide2_0917	PF04280	Tim44-like domain
Alide2_0919	PF03109	Alide2_0919
Alide2_0920	PF00474	Sodium:solute symporter family
Alide2_0921	PF09723	Alide2_0921
Alide2_0922	PF04367	Alide2_0922
Alide2_0923	PF00152	tRNA synthetases class II (D, K and N)
Alide2_0923	PF01336	OB-fold nucleic acid binding domain
Alide2_0923	PF02938	GAD domain
Alide2_0924	PF00293	NUDIX domain
Alide2_0925	PF03372	Endonuclease/Exonuclease/phosphatase family
Alide2_0926	PF13091	PLD-like domain
Alide2_0927	PF01227	GTP cyclohydrolase I
Alide2_0928	PF04940	Sensors of blue-light using FAD
Alide2_0929	PF00892	EamA-like transporter family
Alide2_0930	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_0930	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_0930	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
Alide2_0931	PF00072	Response regulator receiver domain
Alide2_0931	PF00196	Bacterial regulatory proteins, luxR family
Alide2_0932	PF00034	Cytochrome c
Alide2_0935	PF01810	Alide2_0935
Alide2_0936	PF01425	Amidase
Alide2_0937	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
Alide2_0938	PF00005	ABC transporter
Alide2_0938	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
Alide2_0939	PF00005	ABC transporter
Alide2_0939	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
Alide2_0940	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_0941	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_0942	PF12838	4Fe-4S dicluster domain
Alide2_0943	PF01195	Peptidyl-tRNA hydrolase
Alide2_0944	PF01386	Ribosomal L25p family
Alide2_0944	PF14693	Ribosomal protein TL5, C-terminal domain
Alide2_0945	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
Alide2_0945	PF14572	Phosphoribosyl synthetase-associated domain
Alide2_0946	PF00288	GHMP kinases N terminal domain
Alide2_0946	PF08544	GHMP kinases C terminal
Alide2_0947	PF03550	Outer membrane lipoprotein LolB
Alide2_0948	PF13432	Tetratricopeptide repeat
Alide2_0948	PF14559	Tetratricopeptide repeat
Alide2_0949	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
Alide2_0949	PF06827	Zinc finger found in FPG and IleRS
Alide2_0949	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
Alide2_0950	PF00350	Dynamin family
Alide2_0951	PF00633	Helix-hairpin-helix motif
Alide2_0951	PF00730	HhH-GPD superfamily base excision DNA repair protein
Alide2_0951	PF14815	NUDIX domain
Alide2_0952	PF03668	Alide2_0952
Alide2_0953	PF02463	RecF/RecN/SMC N terminal domain
Alide2_0954	PF01513	ATP-NAD kinase
Alide2_0955	PF01628	HrcA protein C terminal domain
Alide2_0955	PF03444	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
Alide2_0957	PF13588	Type I restriction enzyme R protein N terminus (HSDR_N)
Alide2_0958	PF00665	Integrase core domain
Alide2_0958	PF13276	Alide2_0958
Alide2_0959	PF01527	Transposase
Alide2_0960	PF02321	Outer membrane efflux protein
Alide2_0961	PF11582	Protein of unknown function (DUF3240)
Alide2_0963	PF01609	Transposase DDE domain
Alide2_0963	PF13006	Alide2_0963
Alide2_0964	PF16576	Alide2_0964
Alide2_0965	PF01292	Prokaryotic cytochrome b561
Alide2_0966	PF01988	Alide2_0966
Alide2_0967	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_0967	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_0968	PF00072	Response regulator receiver domain
Alide2_0968	PF00486	Transcriptional regulatory protein, C terminal
Alide2_0971	PF00107	Zinc-binding dehydrogenase
Alide2_0971	PF08240	Alcohol dehydrogenase GroES-like domain
Alide2_0972	PF10282	Lactonase, 7-bladed beta-propeller
Alide2_0973	PF00497	Bacterial extracellular solute-binding proteins, family 3
Alide2_0974	PF00392	Bacterial regulatory proteins, gntR family
Alide2_0974	PF07729	FCD domain
Alide2_0975	PF00330	Aconitase family (aconitate hydratase)
Alide2_0975	PF00694	Aconitase C-terminal domain
Alide2_0976	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0977	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0978	PF03091	CutA1 divalent ion tolerance protein
Alide2_0979	PF13378	Enolase C-terminal domain-like
Alide2_0980	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_0981	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_0982	PF00701	Dihydrodipicolinate synthetase family
Alide2_0983	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_0983	PF03466	LysR substrate binding domain
Alide2_0984	PF00448	SRP54-type protein, GTPase domain
Alide2_0984	PF02881	SRP54-type protein, helical bundle domain
Alide2_0985	PF00675	Insulinase (Peptidase family M16)
Alide2_0985	PF05193	Peptidase M16 inactive domain
Alide2_0986	PF05193	Peptidase M16 inactive domain
Alide2_0987	PF03602	Conserved hypothetical protein 95
Alide2_0988	PF01467	Cytidylyltransferase
Alide2_0989	PF04972	BON domain
Alide2_0991	PF07043	Alide2_0991
Alide2_0992	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_0992	PF05227	CHASE3 domain
Alide2_0992	PF07730	Histidine kinase
Alide2_0993	PF00072	Response regulator receiver domain
Alide2_0993	PF00196	Bacterial regulatory proteins, luxR family
Alide2_0994	PF00072	Response regulator receiver domain
Alide2_0995	PF00899	ThiF family
Alide2_0996	PF03572	Peptidase family S41
Alide2_0996	PF13180	PDZ domain
Alide2_0997	PF00300	Histidine phosphatase superfamily (branch 1)
Alide2_0998	PF00581	Rhodanese-like domain
Alide2_0999	PF00462	Glutaredoxin
Alide2_1000	PF02556	Preprotein translocase subunit SecB
Alide2_1001	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
Alide2_1001	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
Alide2_1003	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1004	PF01925	Alide2_1004
Alide2_1005	PF07171	MlrC C-terminus
Alide2_1005	PF07364	Protein of unknown function (DUF1485)
Alide2_1006	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1007	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1007	PF03466	LysR substrate binding domain
Alide2_1008	PF02569	Pantoate-beta-alanine ligase
Alide2_1009	PF02548	Ketopantoate hydroxymethyltransferase
Alide2_1011	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
Alide2_1011	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
Alide2_1012	PF02445	Quinolinate synthetase A protein
Alide2_1013	PF00425	chorismate binding enzyme
Alide2_1013	PF01063	Aminotransferase class IV
Alide2_1014	PF02962	5-carboxymethyl-2-hydroxymuconate isomerase
Alide2_1015	PF00890	FAD binding domain
Alide2_1015	PF02910	Fumarate reductase flavoprotein C-term
Alide2_1016	PF12833	Helix-turn-helix domain
Alide2_1016	PF12852	Cupin
Alide2_1017	PF02627	Carboxymuconolactone decarboxylase family
Alide2_1018	PF02616	ScpA/B protein
Alide2_1019	PF11943	Alide2_1019
Alide2_1021	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Alide2_1021	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Alide2_1022	PF01070	FMN-dependent dehydrogenase
Alide2_1023	PF00890	FAD binding domain
Alide2_1024	PF12625	Alide2_1024
Alide2_1024	PF12833	Helix-turn-helix domain
Alide2_1025	PF00117	Glutamine amidotransferase class-I
Alide2_1026	PF01168	Alanine racemase, N-terminal domain
Alide2_1027	PF03594	Alide2_1027
Alide2_1028	PF00155	Aminotransferase class I and II
Alide2_1028	PF00392	Bacterial regulatory proteins, gntR family
Alide2_1030	PF01588	Putative tRNA binding domain
Alide2_1030	PF09334	tRNA synthetases class I (M)
Alide2_1031	PF01734	Patatin-like phospholipase
Alide2_1032	PF04471	Restriction endonuclease
Alide2_1033	PF00581	Rhodanese-like domain
Alide2_1034	PF00586	AIR synthase related protein, N-terminal domain
Alide2_1034	PF02769	AIR synthase related protein, C-terminal domain
Alide2_1035	PF03595	Voltage-dependent anion channel
Alide2_1036	PF01883	Domain of unknown function DUF59
Alide2_1036	PF10609	ParA/MinD ATPase like
Alide2_1037	PF01575	MaoC like domain
Alide2_1038	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1039	PF03972	MmgE/PrpD family
Alide2_1040	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1040	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1040	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1041	PF02515	CoA-transferase family III
Alide2_1042	PF00392	Bacterial regulatory proteins, gntR family
Alide2_1042	PF07702	UTRA domain
Alide2_1043	PF07690	Major Facilitator Superfamily
Alide2_1044	PF03328	HpcH/HpaI aldolase/citrate lyase family
Alide2_1045	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
Alide2_1045	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
Alide2_1045	PF10531	SLBB domain
Alide2_1045	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
Alide2_1046	PF00384	Molybdopterin oxidoreductase
Alide2_1046	PF01568	Molydopterin dinucleotide binding domain
Alide2_1046	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
Alide2_1046	PF13187	4Fe-4S dicluster domain
Alide2_1046	PF13510	2Fe-2S iron-sulfur cluster binding domain
Alide2_1047	PF11749	Alide2_1047
Alide2_1048	PF11748	Alide2_1048
Alide2_1049	PF00037	4Fe-4S binding domain
Alide2_1049	PF12838	4Fe-4S dicluster domain
Alide2_1049	PF13187	4Fe-4S dicluster domain
Alide2_1050	PF02613	Nitrate reductase delta subunit
Alide2_1052	PF00384	Molybdopterin oxidoreductase
Alide2_1052	PF01568	Molydopterin dinucleotide binding domain
Alide2_1052	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
Alide2_1053	PF13247	4Fe-4S dicluster domain
Alide2_1055	PF01292	Prokaryotic cytochrome b561
Alide2_1057	PF02634	FdhD/NarQ family
Alide2_1060	PF13671	AAA domain
Alide2_1061	PF01258	Prokaryotic dksA/traR C4-type zinc finger
Alide2_1062	PF01152	Bacterial-like globin
Alide2_1063	PF00392	Bacterial regulatory proteins, gntR family
Alide2_1063	PF07702	UTRA domain
Alide2_1064	PF13714	Phosphoenolpyruvate phosphomutase
Alide2_1065	PF00694	Aconitase C-terminal domain
Alide2_1066	PF00330	Aconitase family (aconitate hydratase)
Alide2_1067	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1068	PF01713	Smr domain
Alide2_1069	PF13449	Esterase-like activity of phytase
Alide2_1070	PF04002	RadC-like JAB domain
Alide2_1071	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
Alide2_1072	PF02401	LytB protein
Alide2_1073	PF00571	CBS domain
Alide2_1073	PF01595	Alide2_1073
Alide2_1073	PF03471	Transporter associated domain
Alide2_1074	PF00571	CBS domain
Alide2_1075	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
Alide2_1075	PF02403	Seryl-tRNA synthetase N-terminal domain
Alide2_1076	PF01062	Alide2_1076
Alide2_1079	PF00589	Phage integrase family
Alide2_1079	PF13356	Domain of unknown function (DUF4102)
Alide2_1080	PF07799	Alide2_1080
Alide2_1081	PF13560	Helix-turn-helix domain
Alide2_1083	PF13481	AAA domain
Alide2_1085	PF08867	Alide2_1085
Alide2_1088	PF01062	Alide2_1088
Alide2_1090	PF02397	Alide2_1090
Alide2_1091	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_1091	PF05226	Alide2_1091
Alide2_1092	PF01476	LysM domain
Alide2_1092	PF04773	FecR protein
Alide2_1093	PF00072	Response regulator receiver domain
Alide2_1093	PF00486	Transcriptional regulatory protein, C terminal
Alide2_1094	PF00579	tRNA synthetases class I (W and Y)
Alide2_1094	PF07411	Domain of unknown function (DUF1508)
Alide2_1096	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
Alide2_1097	PF01300	Telomere recombination
Alide2_1098	PF02811	PHP domain
Alide2_1099	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
Alide2_1099	PF00672	HAMP domain
Alide2_1100	PF01368	DHH family
Alide2_1100	PF02272	DHHA1 domain
Alide2_1102	PF02687	Alide2_1102
Alide2_1102	PF12704	MacB-like periplasmic core domain
Alide2_1103	PF00005	ABC transporter
Alide2_1104	PF00034	Cytochrome c
Alide2_1106	PF00920	Dehydratase family
Alide2_1107	PF00920	Dehydratase family
Alide2_1108	PF03061	Thioesterase superfamily
Alide2_1109	PF00210	Ferritin-like domain
Alide2_1110	PF01790	Alide2_1110
Alide2_1111	PF00392	Bacterial regulatory proteins, gntR family
Alide2_1111	PF07729	FCD domain
Alide2_1112	PF05292	Malonyl-CoA decarboxylase (MCD)
Alide2_1112	PF17408	Alide2_1112
Alide2_1113	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1114	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1115	PF00501	AMP-binding enzyme
Alide2_1115	PF13193	AMP-binding enzyme C-terminal domain
Alide2_1116	PF00582	Universal stress protein family
Alide2_1117	PF00122	E1-E2 ATPase
Alide2_1117	PF00403	Heavy-metal-associated domain
Alide2_1117	PF00702	haloacid dehalogenase-like hydrolase
Alide2_1118	PF03597	Alide2_1118
Alide2_1119	PF00115	Cytochrome C and Quinol oxidase polypeptide I
Alide2_1120	PF02433	Cytochrome C oxidase, mono-heme subunit/FixO
Alide2_1121	PF05545	Alide2_1121
Alide2_1122	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
Alide2_1122	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP
Alide2_1123	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
Alide2_1123	PF12801	Alide2_1123
Alide2_1123	PF13746	4Fe-4S dicluster domain
Alide2_1124	PF05751	Alide2_1124
Alide2_1126	PF00027	Cyclic nucleotide-binding domain
Alide2_1126	PF13545	Crp-like helix-turn-helix domain
Alide2_1127	PF04055	Radical SAM superfamily
Alide2_1127	PF06969	HemN C-terminal domain
Alide2_1128	PF13386	Alide2_1128
Alide2_1129	PF11871	Alide2_1129
Alide2_1129	PF13487	HD domain
Alide2_1130	PF00563	EAL domain
Alide2_1130	PF00990	GGDEF domain
Alide2_1130	PF13188	PAS domain
Alide2_1130	PF13426	PAS domain
Alide2_1131	PF05164	Cell division protein ZapA
Alide2_1133	PF00593	TonB dependent receptor
Alide2_1133	PF07715	TonB-dependent Receptor Plug Domain
Alide2_1134	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
Alide2_1134	PF07685	CobB/CobQ-like glutamine amidotransferase domain
Alide2_1135	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
Alide2_1136	PF01497	Periplasmic binding protein
Alide2_1137	PF01032	FecCD transport family
Alide2_1138	PF00005	ABC transporter
Alide2_1139	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
Alide2_1140	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
Alide2_1140	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
Alide2_1141	PF08241	Methyltransferase domain
Alide2_1142	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
Alide2_1143	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1144	PF02515	CoA-transferase family III
Alide2_1145	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_1146	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_1147	PF02515	CoA-transferase family III
Alide2_1148	PF00106	short chain dehydrogenase
Alide2_1149	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1150	PF13577	SnoaL-like domain
Alide2_1151	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1152	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1152	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1152	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1153	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1153	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1154	PF01614	Bacterial transcriptional regulator
Alide2_1154	PF09339	IclR helix-turn-helix domain
Alide2_1157	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1157	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
Alide2_1157	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Alide2_1158	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1159	PF02803	Thiolase, C-terminal domain
Alide2_1160	PF01796	Alide2_1160
Alide2_1161	PF13380	CoA binding domain
Alide2_1161	PF13549	ATP-grasp domain
Alide2_1161	PF13607	Succinyl-CoA ligase like flavodoxin domain
Alide2_1162	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1162	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1162	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1163	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1165	PF01796	Alide2_1165
Alide2_1165	PF12172	Rubredoxin-like zinc ribbon domain (DUF35_N)
Alide2_1166	PF00108	Thiolase, N-terminal domain
Alide2_1166	PF02803	Thiolase, C-terminal domain
Alide2_1167	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1168	PF01012	Electron transfer flavoprotein domain
Alide2_1169	PF00766	Electron transfer flavoprotein FAD-binding domain
Alide2_1169	PF01012	Electron transfer flavoprotein domain
Alide2_1170	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1170	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1171	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1171	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1171	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1172	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1173	PF04430	Protein of unknown function (DUF498/DUF598)
Alide2_1174	PF00155	Aminotransferase class I and II
Alide2_1175	PF00742	Homoserine dehydrogenase
Alide2_1175	PF01842	ACT domain
Alide2_1175	PF03447	Homoserine dehydrogenase, NAD binding domain
Alide2_1176	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
Alide2_1177	PF01850	PIN domain
Alide2_1178	PF00291	Pyridoxal-phosphate dependent enzyme
Alide2_1178	PF14821	Threonine synthase N terminus
Alide2_1179	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
Alide2_1180	PF00994	Probable molybdopterin binding domain
Alide2_1180	PF03453	MoeA N-terminal region (domain I and II)
Alide2_1180	PF03454	MoeA C-terminal region (domain IV)
Alide2_1181	PF02597	ThiS family
Alide2_1182	PF00701	Dihydrodipicolinate synthetase family
Alide2_1184	PF11346	Alide2_1184
Alide2_1186	PF02391	MoaE protein
Alide2_1187	PF00004	ATPase family associated with various cellular activities (AAA)
Alide2_1187	PF02861	Clp amino terminal domain
Alide2_1187	PF07724	AAA domain (Cdc48 subfamily)
Alide2_1187	PF10431	C-terminal, D2-small domain, of ClpB protein
Alide2_1189	PF00171	Aldehyde dehydrogenase family
Alide2_1190	PF00583	Acetyltransferase (GNAT) family
Alide2_1191	PF05175	Methyltransferase small domain
Alide2_1192	PF01207	Dihydrouridine synthase (Dus)
Alide2_1193	PF13091	PLD-like domain
Alide2_1194	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
Alide2_1194	PF01872	RibD C-terminal domain
Alide2_1195	PF07963	Prokaryotic N-terminal methylation motif
Alide2_1195	PF16732	Alide2_1195
Alide2_1196	PF05567	Neisseria PilC beta-propeller domain
Alide2_1197	PF13681	Alide2_1197
Alide2_1197	PF14341	Alide2_1197
Alide2_1198	PF07963	Prokaryotic N-terminal methylation motif
Alide2_1198	PF16074	Alide2_1198
Alide2_1199	PF07963	Prokaryotic N-terminal methylation motif
Alide2_1200	PF12019	Type II transport protein GspH
Alide2_1201	PF03186	Alide2_1201
Alide2_1202	PF00155	Aminotransferase class I and II
Alide2_1203	PF07685	CobB/CobQ-like glutamine amidotransferase domain
Alide2_1203	PF13500	AAA domain
Alide2_1204	PF02277	Phosphoribosyltransferase
Alide2_1205	PF01661	Macro domain
Alide2_1206	PF00633	Helix-hairpin-helix motif
Alide2_1206	PF00730	HhH-GPD superfamily base excision DNA repair protein
Alide2_1206	PF10576	Iron-sulfur binding domain of endonuclease III
Alide2_1207	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1207	PF03466	LysR substrate binding domain
Alide2_1208	PF01425	Amidase
Alide2_1209	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1210	PF06445	GyrI-like small molecule binding domain
Alide2_1211	PF00155	Aminotransferase class I and II
Alide2_1212	PF04102	SlyX
Alide2_1213	PF00248	Aldo/keto reductase family
Alide2_1214	PF05425	Alide2_1214
Alide2_1215	PF12843	Alide2_1215
Alide2_1217	PF01814	Hemerythrin HHE cation binding domain
Alide2_1217	PF04405	Alide2_1217
Alide2_1218	PF02082	Transcriptional regulator
Alide2_1219	PF06798	Alide2_1219
Alide2_1219	PF08298	PrkA AAA domain
Alide2_1220	PF04285	Alide2_1220
Alide2_1221	PF04293	Alide2_1221
Alide2_1222	PF03180	NLPA lipoprotein
Alide2_1223	PF06580	Alide2_1223
Alide2_1224	PF00206	Lyase
Alide2_1224	PF14698	Argininosuccinate lyase C-terminal
Alide2_1225	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1226	PF00207	Alpha-2-macroglobulin family
Alide2_1226	PF01835	MG2 domain
Alide2_1226	PF07703	Alpha-2-macroglobulin family N-terminal region
Alide2_1226	PF11974	Alpha-2-macroglobulin MG1 domain
Alide2_1227	PF00149	Calcineurin-like phosphoesterase
Alide2_1228	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1228	PF03466	LysR substrate binding domain
Alide2_1229	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1230	PF00710	Asparaginase
Alide2_1231	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1231	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1231	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1232	PF13380	CoA binding domain
Alide2_1232	PF13549	ATP-grasp domain
Alide2_1232	PF13607	Succinyl-CoA ligase like flavodoxin domain
Alide2_1233	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1233	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1233	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1234	PF02515	CoA-transferase family III
Alide2_1236	PF00905	Penicillin binding protein transpeptidase domain
Alide2_1236	PF00912	Transglycosylase
Alide2_1236	PF06832	Alide2_1236
Alide2_1237	PF13689	Alide2_1237
Alide2_1238	PF00990	GGDEF domain
Alide2_1238	PF17152	Alide2_1238
Alide2_1239	PF00691	OmpA family
Alide2_1240	PF01070	FMN-dependent dehydrogenase
Alide2_1242	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1242	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1243	PF02515	CoA-transferase family III
Alide2_1244	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1245	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1245	PF03466	LysR substrate binding domain
Alide2_1246	PF00817	impB/mucB/samB family
Alide2_1246	PF11798	IMS family HHH motif
Alide2_1246	PF11799	impB/mucB/samB family C-terminal domain
Alide2_1247	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
Alide2_1247	PF08447	PAS fold
Alide2_1248	PF14489	QueF-like protein
Alide2_1248	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
Alide2_1249	PF13640	2OG-Fe(II) oxygenase superfamily
Alide2_1250	PF03883	Alide2_1250
Alide2_1251	PF00575	S1 RNA binding domain
Alide2_1251	PF10150	Ribonuclease E/G family
Alide2_1252	PF00849	RNA pseudouridylate synthase
Alide2_1252	PF01479	S4 domain
Alide2_1253	PF13419	Haloacid dehalogenase-like hydrolase
Alide2_1254	PF00355	Rieske [2Fe-2S] domain
Alide2_1255	PF01343	Peptidase family S49
Alide2_1256	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
Alide2_1257	PF02545	Maf-like protein
Alide2_1258	PF02620	Alide2_1258
Alide2_1259	PF01783	Ribosomal L32p protein family
Alide2_1260	PF02504	Fatty acid synthesis protein
Alide2_1261	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Alide2_1261	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
Alide2_1262	PF00698	Acyl transferase domain
Alide2_1263	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_1264	PF00550	Phosphopantetheine attachment site
Alide2_1265	PF00109	Beta-ketoacyl synthase, N-terminal domain
Alide2_1265	PF02801	Beta-ketoacyl synthase, C-terminal domain
Alide2_1267	PF04542	Sigma-70 region 2
Alide2_1267	PF08281	Sigma-70, region 4
Alide2_1268	PF03872	Anti sigma-E protein RseA, N-terminal domain
Alide2_1269	PF03888	MucB/RseB family
Alide2_1269	PF17188	Alide2_1269
Alide2_1270	PF13180	PDZ domain
Alide2_1270	PF13365	Trypsin-like peptidase domain
Alide2_1271	PF00009	Elongation factor Tu GTP binding domain
Alide2_1271	PF00679	Elongation factor G C-terminus
Alide2_1271	PF03144	Elongation factor Tu domain 2
Alide2_1271	PF06421	GTP-binding protein LepA C-terminus
Alide2_1272	PF00717	Peptidase S24-like
Alide2_1272	PF10502	Signal peptidase, peptidase S26
Alide2_1273	PF16137	Alide2_1273
Alide2_1274	PF00035	Double-stranded RNA binding motif
Alide2_1274	PF14622	Ribonuclease-III-like
Alide2_1275	PF01926	50S ribosome-binding GTPase
Alide2_1275	PF07650	KH domain
Alide2_1276	PF02565	Recombination protein O C terminal
Alide2_1276	PF11967	Recombination protein O N terminal
Alide2_1277	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
Alide2_1278	PF01648	4'-phosphopantetheinyl transferase superfamily
Alide2_1279	PF00933	Glycosyl hydrolase family 3 N terminal domain
Alide2_1280	PF00365	Phosphofructokinase
Alide2_1281	PF00005	ABC transporter
Alide2_1282	PF00005	ABC transporter
Alide2_1282	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_1283	PF02653	Alide2_1283
Alide2_1283	PF11862	Alide2_1283
Alide2_1284	PF02653	Alide2_1284
Alide2_1285	PF13458	Periplasmic binding protein
Alide2_1286	PF00924	Mechanosensitive ion channel
Alide2_1287	PF00152	tRNA synthetases class II (D, K and N)
Alide2_1287	PF01336	OB-fold nucleic acid binding domain
Alide2_1288	PF02397	Alide2_1288
Alide2_1289	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
Alide2_1290	PF13649	Methyltransferase domain
Alide2_1291	PF00535	Glycosyl transferase family 2
Alide2_1292	PF13477	Glycosyl transferase 4-like
Alide2_1292	PF13692	Glycosyl transferases group 1
Alide2_1293	PF00132	Bacterial transferase hexapeptide (six repeats)
Alide2_1294	PF13440	Alide2_1294
Alide2_1295	PF02719	Polysaccharide biosynthesis protein
Alide2_1295	PF13727	CoA-binding domain
Alide2_1296	PF02190	ATP-dependent protease La (LON) domain
Alide2_1297	PF02325	Alide2_1297
Alide2_1298	PF01039	Carboxyl transferase domain
Alide2_1299	PF00290	Tryptophan synthase alpha chain
Alide2_1300	PF00291	Pyridoxal-phosphate dependent enzyme
Alide2_1301	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
Alide2_1302	PF01416	tRNA pseudouridine synthase
Alide2_1304	PF01118	Semialdehyde dehydrogenase, NAD binding domain
Alide2_1304	PF02774	Semialdehyde dehydrogenase, dimerisation domain
Alide2_1305	PF00180	Isocitrate/isopropylmalate dehydrogenase
Alide2_1306	PF00694	Aconitase C-terminal domain
Alide2_1307	PF08085	Alide2_1307
Alide2_1308	PF00330	Aconitase family (aconitate hydratase)
Alide2_1309	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1309	PF03466	LysR substrate binding domain
Alide2_1310	PF00753	Metallo-beta-lactamase superfamily
Alide2_1310	PF07521	RNA-metabolising metallo-beta-lactamase
Alide2_1310	PF10996	Beta-Casp domain
Alide2_1311	PF00067	Cytochrome P450
Alide2_1312	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Alide2_1313	PF02441	Flavoprotein
Alide2_1314	PF08859	Alide2_1314
Alide2_1315	PF02036	SCP-2 sterol transfer family
Alide2_1316	PF01136	Alide2_1316
Alide2_1317	PF01136	Alide2_1317
Alide2_1318	PF01212	Beta-eliminating lyase
Alide2_1319	PF07589	Alide2_1319
Alide2_1320	PF00226	DnaJ domain
Alide2_1320	PF00684	DnaJ central domain
Alide2_1320	PF01556	DnaJ C terminal domain
Alide2_1321	PF00012	Hsp70 protein
Alide2_1322	PF01025	GrpE
Alide2_1323	PF01250	Ribosomal protein S6
Alide2_1325	PF01084	Ribosomal protein S18
Alide2_1326	PF01281	Ribosomal protein L9, N-terminal domain
Alide2_1326	PF03948	Ribosomal protein L9, C-terminal domain
Alide2_1327	PF00772	DnaB-like helicase N terminal domain
Alide2_1327	PF03796	DnaB-like helicase C terminal domain
Alide2_1328	PF00171	Aldehyde dehydrogenase family
Alide2_1329	PF02562	PhoH-like protein
Alide2_1329	PF13638	PIN domain
Alide2_1330	PF00578	AhpC/TSA family
Alide2_1331	PF11813	Alide2_1331
Alide2_1332	PF01292	Prokaryotic cytochrome b561
Alide2_1333	PF04264	YceI-like domain
Alide2_1334	PF04264	YceI-like domain
Alide2_1335	PF00390	Malic enzyme, N-terminal domain
Alide2_1335	PF01515	Phosphate acetyl/butaryl transferase
Alide2_1335	PF03949	Malic enzyme, NAD binding domain
Alide2_1336	PF00860	Permease family
Alide2_1337	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
Alide2_1339	PF01546	Peptidase family M20/M25/M40
Alide2_1339	PF07687	Peptidase dimerisation domain
Alide2_1340	PF01546	Peptidase family M20/M25/M40
Alide2_1340	PF09349	OHCU decarboxylase
Alide2_1341	PF01522	Polysaccharide deacetylase
Alide2_1342	PF00392	Bacterial regulatory proteins, gntR family
Alide2_1342	PF07729	FCD domain
Alide2_1343	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1343	PF03466	LysR substrate binding domain
Alide2_1344	PF00180	Isocitrate/isopropylmalate dehydrogenase
Alide2_1345	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1346	PF05161	MOFRL family
Alide2_1346	PF13660	Domain of unknown function (DUF4147)
Alide2_1347	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1347	PF03466	LysR substrate binding domain
Alide2_1348	PF00202	Aminotransferase class-III
Alide2_1349	PF00497	Bacterial extracellular solute-binding proteins, family 3
Alide2_1350	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1350	PF03466	LysR substrate binding domain
Alide2_1351	PF00205	Thiamine pyrophosphate enzyme, central domain
Alide2_1351	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Alide2_1351	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Alide2_1352	PF01261	Xylose isomerase-like TIM barrel
Alide2_1353	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
Alide2_1353	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
Alide2_1356	PF01019	Gamma-glutamyltranspeptidase
Alide2_1357	PF00576	HIUase/Transthyretin family
Alide2_1359	PF02625	XdhC and CoxI family
Alide2_1359	PF13478	XdhC Rossmann domain
Alide2_1360	PF06181	Alide2_1360
Alide2_1361	PF00692	dUTPase
Alide2_1362	PF04228	Alide2_1362
Alide2_1363	PF00270	DEAD/DEAH box helicase
Alide2_1363	PF00271	Helicase conserved C-terminal domain
Alide2_1364	PF05573	NosL
Alide2_1365	PF05573	NosL
Alide2_1366	PF12679	Alide2_1366
Alide2_1367	PF00005	ABC transporter
Alide2_1368	PF05048	Periplasmic copper-binding protein (NosD)
Alide2_1369	PF04205	FMN-binding domain
Alide2_1369	PF12801	Alide2_1369
Alide2_1370	PF13473	Cupredoxin-like domain
Alide2_1372	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
Alide2_1373	PF02424	ApbE family
Alide2_1374	PF00149	Calcineurin-like phosphoesterase
Alide2_1375	PF00816	H-NS histone family
Alide2_1376	PF00330	Aconitase family (aconitate hydratase)
Alide2_1376	PF00694	Aconitase C-terminal domain
Alide2_1377	PF01494	FAD binding domain
Alide2_1378	PF07690	Major Facilitator Superfamily
Alide2_1379	PF07690	Major Facilitator Superfamily
Alide2_1380	PF00072	Response regulator receiver domain
Alide2_1380	PF04397	LytTr DNA-binding domain
Alide2_1381	PF06580	Alide2_1381
Alide2_1382	PF13239	Alide2_1382
Alide2_1384	PF02673	Alide2_1384
Alide2_1385	PF12697	Alpha/beta hydrolase family
Alide2_1386	PF16576	Alide2_1386
Alide2_1387	PF00873	AcrB/AcrD/AcrF family
Alide2_1388	PF00873	AcrB/AcrD/AcrF family
Alide2_1389	PF02321	Outer membrane efflux protein
Alide2_1390	PF00488	MutS domain V
Alide2_1390	PF01624	MutS domain I
Alide2_1390	PF05188	MutS domain II
Alide2_1390	PF05190	MutS family domain IV
Alide2_1390	PF05192	MutS domain III
Alide2_1391	PF00440	Bacterial regulatory proteins, tetR family
Alide2_1392	PF01557	Fumarylacetoacetate (FAA) hydrolase family
Alide2_1396	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1397	PF01070	FMN-dependent dehydrogenase
Alide2_1398	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1398	PF03466	LysR substrate binding domain
Alide2_1399	PF09423	PhoD-like phosphatase
Alide2_1399	PF16655	Alide2_1399
Alide2_1400	PF00990	GGDEF domain
Alide2_1401	PF01975	Survival protein SurE
Alide2_1402	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Alide2_1403	PF01476	LysM domain
Alide2_1403	PF01551	Peptidase family M23
Alide2_1404	PF00849	RNA pseudouridylate synthase
Alide2_1404	PF01479	S4 domain
Alide2_1405	PF04079	Putative transcriptional regulators (Ypuh-like)
Alide2_1406	PF00849	RNA pseudouridylate synthase
Alide2_1406	PF01479	S4 domain
Alide2_1407	PF00334	Nucleoside diphosphate kinase
Alide2_1408	PF04055	Radical SAM superfamily
Alide2_1409	PF13432	Tetratricopeptide repeat
Alide2_1409	PF14559	Tetratricopeptide repeat
Alide2_1410	PF13413	Helix-turn-helix domain
Alide2_1410	PF13464	Alide2_1410
Alide2_1411	PF04551	GcpE protein
Alide2_1412	PF03129	Anticodon binding domain
Alide2_1412	PF13393	Histidyl-tRNA synthetase
Alide2_1413	PF09976	Tetratricopeptide repeat
Alide2_1414	PF13360	PQQ-like domain
Alide2_1415	PF01926	50S ribosome-binding GTPase
Alide2_1415	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
Alide2_1416	PF17209	Alide2_1416
Alide2_1417	PF01926	50S ribosome-binding GTPase
Alide2_1417	PF13167	Alide2_1417
Alide2_1417	PF16360	Alide2_1417
Alide2_1418	PF01145	SPFH domain / Band 7 family
Alide2_1418	PF12221	Alide2_1418
Alide2_1419	PF01145	SPFH domain / Band 7 family
Alide2_1420	PF09838	Alide2_1420
Alide2_1421	PF13393	Histidyl-tRNA synthetase
Alide2_1422	PF00709	Adenylosuccinate synthetase
Alide2_1423	PF00156	Phosphoribosyl transferase domain
Alide2_1424	PF00849	RNA pseudouridylate synthase
Alide2_1425	PF02239	Cytochrome D1 heme domain
Alide2_1426	PF01522	Polysaccharide deacetylase
Alide2_1427	PF04116	Alide2_1427
Alide2_1428	PF07264	Etoposide-induced protein 2
Alide2_1429	PF00994	Probable molybdopterin binding domain
Alide2_1430	PF00120	Glutamine synthetase, catalytic domain
Alide2_1430	PF03951	Glutamine synthetase, beta-Grasp domain
Alide2_1432	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_1432	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_1433	PF00072	Response regulator receiver domain
Alide2_1433	PF00158	Sigma-54 interaction domain
Alide2_1433	PF02954	Bacterial regulatory protein, Fis family
Alide2_1434	PF03372	Endonuclease/Exonuclease/phosphatase family
Alide2_1436	PF03814	Alide2_1436
Alide2_1437	PF00122	E1-E2 ATPase
Alide2_1437	PF00702	haloacid dehalogenase-like hydrolase
Alide2_1438	PF02669	Alide2_1438
Alide2_1439	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_1439	PF00582	Universal stress protein family
Alide2_1439	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_1439	PF02702	Osmosensitive K+ channel His kinase sensor domain
Alide2_1439	PF13493	Domain of unknown function (DUF4118)
Alide2_1440	PF00072	Response regulator receiver domain
Alide2_1440	PF00486	Transcriptional regulatory protein, C terminal
Alide2_1441	PF13340	Alide2_1441
Alide2_1442	PF01609	Transposase DDE domain
Alide2_1443	PF11828	Alide2_1443
Alide2_1444	PF00691	OmpA family
Alide2_1444	PF05650	Alide2_1444
Alide2_1446	PF00186	Dihydrofolate reductase
Alide2_1447	PF00303	Thymidylate synthase
Alide2_1448	PF01565	FAD binding domain
Alide2_1448	PF02913	FAD linked oxidases, C-terminal domain
Alide2_1449	PF09842	Alide2_1449
Alide2_1450	PF03631	Alide2_1450
Alide2_1451	PF11067	Alide2_1451
Alide2_1451	PF11981	Alide2_1451
Alide2_1452	PF01593	Flavin containing amine oxidoreductase
Alide2_1453	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
Alide2_1453	PF02203	Tar ligand binding domain homologue
Alide2_1454	PF00494	Squalene/phytoene synthase
Alide2_1455	PF00494	Squalene/phytoene synthase
Alide2_1456	PF16576	Alide2_1456
Alide2_1457	PF00873	AcrB/AcrD/AcrF family
Alide2_1458	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
Alide2_1458	PF05697	Bacterial trigger factor protein (TF)
Alide2_1458	PF05698	Bacterial trigger factor protein (TF) C-terminus
Alide2_1459	PF00574	Clp protease
Alide2_1460	PF06689	ClpX C4-type zinc finger
Alide2_1460	PF07724	AAA domain (Cdc48 subfamily)
Alide2_1460	PF10431	C-terminal, D2-small domain, of ClpB protein
Alide2_1461	PF00004	ATPase family associated with various cellular activities (AAA)
Alide2_1461	PF02190	ATP-dependent protease La (LON) domain
Alide2_1461	PF05362	Lon protease (S16) C-terminal proteolytic domain
Alide2_1462	PF00440	Bacterial regulatory proteins, tetR family
Alide2_1463	PF03328	HpcH/HpaI aldolase/citrate lyase family
Alide2_1464	PF01575	MaoC like domain
Alide2_1465	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1465	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1465	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1466	PF02515	CoA-transferase family III
Alide2_1467	PF02515	CoA-transferase family III
Alide2_1468	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1469	PF13474	SnoaL-like domain
Alide2_1470	PF00881	Nitroreductase family
Alide2_1471	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1472	PF13458	Periplasmic binding protein
Alide2_1473	PF02653	Alide2_1473
Alide2_1474	PF02653	Alide2_1474
Alide2_1475	PF00005	ABC transporter
Alide2_1475	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_1476	PF00005	ABC transporter
Alide2_1477	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
Alide2_1477	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_1478	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_1479	PF03972	MmgE/PrpD family
Alide2_1480	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1480	PF03466	LysR substrate binding domain
Alide2_1481	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1483	PF02515	CoA-transferase family III
Alide2_1486	PF02515	CoA-transferase family III
Alide2_1487	PF02515	CoA-transferase family III
Alide2_1488	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1489	PF00108	Thiolase, N-terminal domain
Alide2_1489	PF02803	Thiolase, C-terminal domain
Alide2_1491	PF07287	Alide2_1491
Alide2_1492	PF01575	MaoC like domain
Alide2_1493	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1493	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1493	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1495	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_1496	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1497	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1498	PF02515	CoA-transferase family III
Alide2_1499	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1499	PF03466	LysR substrate binding domain
Alide2_1501	PF00732	GMC oxidoreductase
Alide2_1501	PF05199	GMC oxidoreductase
Alide2_1502	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1503	PF11136	Alide2_1503
Alide2_1504	PF03972	MmgE/PrpD family
Alide2_1505	PF01614	Bacterial transcriptional regulator
Alide2_1505	PF09339	IclR helix-turn-helix domain
Alide2_1506	PF01614	Bacterial transcriptional regulator
Alide2_1506	PF09339	IclR helix-turn-helix domain
Alide2_1507	PF12697	Alpha/beta hydrolase family
Alide2_1508	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1508	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1508	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1509	PF01575	MaoC like domain
Alide2_1509	PF13452	N-terminal half of MaoC dehydratase
Alide2_1510	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_1511	PF00108	Thiolase, N-terminal domain
Alide2_1511	PF02803	Thiolase, C-terminal domain
Alide2_1512	PF00501	AMP-binding enzyme
Alide2_1512	PF13193	AMP-binding enzyme C-terminal domain
Alide2_1512	PF16177	Alide2_1512
Alide2_1513	PF01614	Bacterial transcriptional regulator
Alide2_1513	PF09339	IclR helix-turn-helix domain
Alide2_1514	PF02515	CoA-transferase family III
Alide2_1515	PF03972	MmgE/PrpD family
Alide2_1516	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1516	PF03466	LysR substrate binding domain
Alide2_1517	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1517	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1517	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1518	PF01012	Electron transfer flavoprotein domain
Alide2_1519	PF00766	Electron transfer flavoprotein FAD-binding domain
Alide2_1519	PF01012	Electron transfer flavoprotein domain
Alide2_1520	PF13452	N-terminal half of MaoC dehydratase
Alide2_1521	PF02515	CoA-transferase family III
Alide2_1522	PF03328	HpcH/HpaI aldolase/citrate lyase family
Alide2_1524	PF00005	ABC transporter
Alide2_1525	PF00005	ABC transporter
Alide2_1525	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_1526	PF02653	Alide2_1526
Alide2_1527	PF02653	Alide2_1527
Alide2_1528	PF13458	Periplasmic binding protein
Alide2_1529	PF00107	Zinc-binding dehydrogenase
Alide2_1529	PF08240	Alcohol dehydrogenase GroES-like domain
Alide2_1530	PF00171	Aldehyde dehydrogenase family
Alide2_1532	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1533	PF03972	MmgE/PrpD family
Alide2_1534	PF00171	Aldehyde dehydrogenase family
Alide2_1535	PF00171	Aldehyde dehydrogenase family
Alide2_1536	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1537	PF05977	Transmembrane secretion effector
Alide2_1538	PF13609	Gram-negative porin
Alide2_1539	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1540	PF02653	Alide2_1540
Alide2_1541	PF02653	Alide2_1541
Alide2_1542	PF00005	ABC transporter
Alide2_1542	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_1543	PF00005	ABC transporter
Alide2_1544	PF13458	Periplasmic binding protein
Alide2_1545	PF00501	AMP-binding enzyme
Alide2_1545	PF13193	AMP-binding enzyme C-terminal domain
Alide2_1546	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1546	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1546	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1547	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_1548	PF01614	Bacterial transcriptional regulator
Alide2_1548	PF09339	IclR helix-turn-helix domain
Alide2_1549	PF00816	H-NS histone family
Alide2_1550	PF07690	Major Facilitator Superfamily
Alide2_1551	PF00665	Integrase core domain
Alide2_1551	PF13011	Alide2_1551
Alide2_1552	PF13245	Part of AAA domain
Alide2_1554	PF01527	Transposase
Alide2_1556	PF01609	Transposase DDE domain
Alide2_1556	PF05598	Alide2_1556
Alide2_1557	PF01609	Transposase DDE domain
Alide2_1557	PF05598	Alide2_1557
Alide2_1560	PF00665	Integrase core domain
Alide2_1560	PF13936	Helix-turn-helix domain
Alide2_1562	PF10038	Alide2_1562
Alide2_1563	PF03743	Bacterial conjugation TrbI-like protein
Alide2_1564	PF03524	Conjugal transfer protein
Alide2_1565	PF04335	VirB8 protein
Alide2_1566	PF04610	Alide2_1566
Alide2_1568	PF13605	Alide2_1568
Alide2_1569	PF03135	Alide2_1569
Alide2_1570	PF05101	Alide2_1570
Alide2_1571	PF04956	Alide2_1571
Alide2_1572	PF00437	Type II/IV secretion system protein
Alide2_1573	PF01402	Ribbon-helix-helix protein, copG family
Alide2_1574	PF02534	Type IV secretory system Conjugative DNA transfer
Alide2_1576	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1576	PF03466	LysR substrate binding domain
Alide2_1577	PF01494	FAD binding domain
Alide2_1578	PF02321	Outer membrane efflux protein
Alide2_1579	PF12698	ABC-2 family transporter protein
Alide2_1580	PF12698	ABC-2 family transporter protein
Alide2_1581	PF00005	ABC transporter
Alide2_1582	PF16576	Alide2_1582
Alide2_1583	PF00440	Bacterial regulatory proteins, tetR family
Alide2_1583	PF09209	Domain of unknown function (DUF1956)
Alide2_1585	PF11843	Alide2_1585
Alide2_1587	PF10502	Signal peptidase, peptidase S26
Alide2_1588	PF11000	Alide2_1588
Alide2_1590	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
Alide2_1591	PF10134	Alide2_1591
Alide2_1592	PF12728	Helix-turn-helix domain
Alide2_1593	PF10074	Alide2_1593
Alide2_1594	PF11171	Alide2_1594
Alide2_1595	PF01381	Helix-turn-helix
Alide2_1596	PF05284	Alide2_1596
Alide2_1597	PF12840	Helix-turn-helix domain
Alide2_1599	PF01451	Low molecular weight phosphotyrosine protein phosphatase
Alide2_1600	PF01758	Sodium Bile acid symporter family
Alide2_1601	PF03960	ArsC family
Alide2_1602	PF03551	Transcriptional regulator PadR-like family
Alide2_1603	PF02417	Alide2_1603
Alide2_1604	PF13527	Acetyltransferase (GNAT) domain
Alide2_1605	PF02195	ParB-like nuclease domain
Alide2_1606	PF06067	Alide2_1606
Alide2_1608	PF11171	Alide2_1608
Alide2_1609	PF04002	RadC-like JAB domain
Alide2_1610	PF13676	TIR domain
Alide2_1612	PF08937	MTH538 TIR-like domain (DUF1863)
Alide2_1613	PF03167	Uracil DNA glycosylase superfamily
Alide2_1616	PF08937	MTH538 TIR-like domain (DUF1863)
Alide2_1617	PF01381	Helix-turn-helix
Alide2_1618	PF06296	Alide2_1618
Alide2_1619	PF00589	Phage integrase family
Alide2_1619	PF13356	Domain of unknown function (DUF4102)
Alide2_1619	PF14659	Phage integrase, N-terminal SAM-like domain
Alide2_1621	PF01541	GIY-YIG catalytic domain
Alide2_1621	PF02151	UvrB/uvrC motif
Alide2_1621	PF08459	UvrC Helix-hairpin-helix N-terminal
Alide2_1621	PF14520	Helix-hairpin-helix domain
Alide2_1622	PF01066	CDP-alcohol phosphatidyltransferase
Alide2_1623	PF00216	Bacterial DNA-binding protein
Alide2_1624	PF13616	PPIC-type PPIASE domain
Alide2_1624	PF13624	SurA N-terminal domain
Alide2_1625	PF13458	Periplasmic binding protein
Alide2_1626	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1627	PF00501	AMP-binding enzyme
Alide2_1628	PF01039	Carboxyl transferase domain
Alide2_1629	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
Alide2_1629	PF00364	Biotin-requiring enzyme
Alide2_1629	PF02785	Biotin carboxylase C-terminal domain
Alide2_1629	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
Alide2_1630	PF00682	HMGL-like
Alide2_1631	PF00501	AMP-binding enzyme
Alide2_1631	PF13193	AMP-binding enzyme C-terminal domain
Alide2_1632	PF00440	Bacterial regulatory proteins, tetR family
Alide2_1632	PF08359	YsiA-like protein, C-terminal region
Alide2_1633	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1635	PF00291	Pyridoxal-phosphate dependent enzyme
Alide2_1636	PF00293	NUDIX domain
Alide2_1636	PF14803	Nudix N-terminal
Alide2_1637	PF01206	Sulfurtransferase TusA
Alide2_1638	PF00483	Nucleotidyl transferase
Alide2_1639	PF00133	tRNA synthetases class I (I, L, M and V)
Alide2_1639	PF08264	Anticodon-binding domain of tRNA
Alide2_1639	PF10458	Valyl tRNA synthetase tRNA binding arm
Alide2_1641	PF02630	SCO1/SenC
Alide2_1642	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
Alide2_1643	PF02433	Cytochrome C oxidase, mono-heme subunit/FixO
Alide2_1644	PF00115	Cytochrome C and Quinol oxidase polypeptide I
Alide2_1645	PF07219	Alide2_1645
Alide2_1646	PF04375	Alide2_1646
Alide2_1647	PF02602	Uroporphyrinogen-III synthase HemD
Alide2_1648	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
Alide2_1648	PF03900	Porphobilinogen deaminase, C-terminal domain
Alide2_1649	PF00311	Phosphoenolpyruvate carboxylase
Alide2_1650	PF05280	Flagellar transcriptional activator (FlhC)
Alide2_1651	PF05247	Flagellar transcriptional activator (FlhD)
Alide2_1652	PF00210	Ferritin-like domain
Alide2_1653	PF00578	AhpC/TSA family
Alide2_1653	PF10417	C-terminal domain of 1-Cys peroxiredoxin
Alide2_1654	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_1654	PF13192	Thioredoxin domain
Alide2_1655	PF00199	Catalase
Alide2_1655	PF06628	Catalase-related immune-responsive
Alide2_1657	PF02321	Outer membrane efflux protein
Alide2_1659	PF16576	Alide2_1659
Alide2_1660	PF00873	AcrB/AcrD/AcrF family
Alide2_1661	PF03618	Alide2_1661
Alide2_1662	PF00391	PEP-utilising enzyme, mobile domain
Alide2_1662	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
Alide2_1662	PF02896	PEP-utilising enzyme, TIM barrel domain
Alide2_1663	PF13937	Alide2_1663
Alide2_1664	PF00474	Sodium:solute symporter family
Alide2_1666	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1666	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1666	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1666	PF12418	Alide2_1666
Alide2_1666	PF12806	Alide2_1666
Alide2_1667	PF12625	Alide2_1667
Alide2_1667	PF12833	Helix-turn-helix domain
Alide2_1668	PF13458	Periplasmic binding protein
Alide2_1669	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1669	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1669	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1670	PF02515	CoA-transferase family III
Alide2_1671	PF00501	AMP-binding enzyme
Alide2_1671	PF13193	AMP-binding enzyme C-terminal domain
Alide2_1672	PF00108	Thiolase, N-terminal domain
Alide2_1672	PF02803	Thiolase, C-terminal domain
Alide2_1673	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1674	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_1676	PF01132	Elongation factor P (EF-P) OB domain
Alide2_1676	PF08207	Elongation factor P (EF-P) KOW-like domain
Alide2_1676	PF09285	Elongation factor P, C-terminal
Alide2_1677	PF10093	Alide2_1677
Alide2_1678	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1678	PF03466	LysR substrate binding domain
Alide2_1679	PF02515	CoA-transferase family III
Alide2_1680	PF00682	HMGL-like
Alide2_1681	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1682	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1683	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1683	PF03466	LysR substrate binding domain
Alide2_1684	PF02515	CoA-transferase family III
Alide2_1685	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1685	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1685	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1686	PF09084	NMT1/THI5 like
Alide2_1687	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_1688	PF00005	ABC transporter
Alide2_1689	PF00392	Bacterial regulatory proteins, gntR family
Alide2_1689	PF07702	UTRA domain
Alide2_1690	PF00221	Aromatic amino acid lyase
Alide2_1691	PF00392	Bacterial regulatory proteins, gntR family
Alide2_1691	PF07702	UTRA domain
Alide2_1692	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
Alide2_1693	PF01175	Urocanase
Alide2_1693	PF17391	Alide2_1693
Alide2_1693	PF17392	Alide2_1693
Alide2_1694	PF01614	Bacterial transcriptional regulator
Alide2_1694	PF09339	IclR helix-turn-helix domain
Alide2_1695	PF00497	Bacterial extracellular solute-binding proteins, family 3
Alide2_1696	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_1697	PF00005	ABC transporter
Alide2_1698	PF05962	HutD
Alide2_1699	PF01979	Amidohydrolase family
Alide2_1700	PF01979	Amidohydrolase family
Alide2_1701	PF05013	N-formylglutamate amidohydrolase
Alide2_1702	PF01177	Asp/Glu/Hydantoin racemase
Alide2_1703	PF06080	Alide2_1703
Alide2_1704	PF03328	HpcH/HpaI aldolase/citrate lyase family
Alide2_1705	PF00171	Aldehyde dehydrogenase family
Alide2_1706	PF04295	Alide2_1706
Alide2_1706	PF08666	SAF domain
Alide2_1707	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1708	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1708	PF03466	LysR substrate binding domain
Alide2_1709	PF01734	Patatin-like phospholipase
Alide2_1710	PF00180	Isocitrate/isopropylmalate dehydrogenase
Alide2_1711	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1711	PF03466	LysR substrate binding domain
Alide2_1712	PF05099	Tellurite resistance protein TerB
Alide2_1715	PF00216	Bacterial DNA-binding protein
Alide2_1716	PF01381	Helix-turn-helix
Alide2_1717	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1717	PF03466	LysR substrate binding domain
Alide2_1719	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_1720	PF09361	Alide2_1720
Alide2_1721	PF07167	Alide2_1721
Alide2_1721	PF12551	Alide2_1721
Alide2_1722	PF00440	Bacterial regulatory proteins, tetR family
Alide2_1722	PF08359	YsiA-like protein, C-terminal region
Alide2_1724	PF16576	Alide2_1724
Alide2_1725	PF00005	ABC transporter
Alide2_1726	PF12698	ABC-2 family transporter protein
Alide2_1727	PF12698	ABC-2 family transporter protein
Alide2_1728	PF02321	Outer membrane efflux protein
Alide2_1729	PF11127	Protein of unknown function (DUF2892)
Alide2_1730	PF00753	Metallo-beta-lactamase superfamily
Alide2_1730	PF07521	RNA-metabolising metallo-beta-lactamase
Alide2_1730	PF10996	Beta-Casp domain
Alide2_1731	PF03641	Possible lysine decarboxylase
Alide2_1732	PF09982	Uncharacterized protein conserved in bacteria (DUF2219)
Alide2_1733	PF01322	Cytochrome C'
Alide2_1735	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1735	PF03466	LysR substrate binding domain
Alide2_1737	PF05930	Prophage CP4-57 regulatory protein (AlpA)
Alide2_1738	PF13614	AAA domain
Alide2_1741	PF11198	Alide2_1741
Alide2_1743	PF13091	PLD-like domain
Alide2_1744	PF08900	Alide2_1744
Alide2_1745	PF11358	Alide2_1745
Alide2_1746	PF00436	Single-strand binding protein family
Alide2_1747	PF01131	DNA topoisomerase
Alide2_1747	PF01396	Alide2_1747
Alide2_1747	PF01751	Toprim domain
Alide2_1752	PF11284	Alide2_1752
Alide2_1753	PF12101	Alide2_1753
Alide2_1754	PF11679	Alide2_1754
Alide2_1759	PF00271	Helicase conserved C-terminal domain
Alide2_1761	PF09828	Alide2_1761
Alide2_1762	PF02417	Alide2_1762
Alide2_1763	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
Alide2_1764	PF00665	Integrase core domain
Alide2_1764	PF13276	Alide2_1764
Alide2_1765	PF01527	Transposase
Alide2_1766	PF07485	Alide2_1766
Alide2_1767	PF09828	Alide2_1767
Alide2_1768	PF07690	Major Facilitator Superfamily
Alide2_1769	PF00072	Response regulator receiver domain
Alide2_1769	PF00486	Transcriptional regulatory protein, C terminal
Alide2_1770	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_1770	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_1771	PF01436	NHL repeat
Alide2_1772	PF13670	Alide2_1772
Alide2_1773	PF00005	ABC transporter
Alide2_1775	PF02210	Laminin G domain
Alide2_1782	PF11072	Alide2_1782
Alide2_1783	PF12696	TraM recognition site of TraD and TraG
Alide2_1784	PF14348	Alide2_1784
Alide2_1785	PF13166	Alide2_1785
Alide2_1786	PF04851	Type III restriction enzyme, res subunit
Alide2_1787	PF01555	DNA methylase
Alide2_1788	PF10592	Alide2_1788
Alide2_1789	PF00082	Subtilase family
Alide2_1790	PF00004	ATPase family associated with various cellular activities (AAA)
Alide2_1791	PF00176	SNF2 family N-terminal domain
Alide2_1791	PF00271	Helicase conserved C-terminal domain
Alide2_1792	PF12728	Helix-turn-helix domain
Alide2_1793	PF09686	Alide2_1793
Alide2_1794	PF11660	Alide2_1794
Alide2_1795	PF11190	Alide2_1795
Alide2_1796	PF11990	Alide2_1796
Alide2_1797	PF11444	Alide2_1797
Alide2_1798	PF11920	Alide2_1798
Alide2_1801	PF11130	Alide2_1801
Alide2_1802	PF13462	Thioredoxin
Alide2_1803	PF04002	RadC-like JAB domain
Alide2_1804	PF13411	MerR HTH family regulatory protein
Alide2_1805	PF02384	N-6 DNA Methylase
Alide2_1807	PF07511	Alide2_1807
Alide2_1808	PF06834	Alide2_1808
Alide2_1811	PF07916	Alide2_1811
Alide2_1812	PF12553	Alide2_1812
Alide2_1813	PF11459	Alide2_1813
Alide2_1813	PF17194	Alide2_1813
Alide2_1814	PF08843	Nucleotidyl transferase of unknown function (DUF1814)
Alide2_1815	PF07514	Putative helicase
Alide2_1815	PF07515	Protein of unknown function (DUF1528)
Alide2_1816	PF01381	Helix-turn-helix
Alide2_1817	PF03466	LysR substrate binding domain
Alide2_1819	PF01252	Alide2_1819
Alide2_1819	PF01569	PAP2 superfamily
Alide2_1820	PF00122	E1-E2 ATPase
Alide2_1820	PF00403	Heavy-metal-associated domain
Alide2_1820	PF00702	haloacid dehalogenase-like hydrolase
Alide2_1821	PF13411	MerR HTH family regulatory protein
Alide2_1822	PF00589	Phage integrase family
Alide2_1822	PF13356	Domain of unknown function (DUF4102)
Alide2_1823	PF13338	Alide2_1823
Alide2_1824	PF11855	Alide2_1824
Alide2_1825	PF13835	Alide2_1825
Alide2_1826	PF13555	P-loop containing region of AAA domain
Alide2_1826	PF13558	Putative exonuclease SbcCD, C subunit
Alide2_1827	PF09983	Alide2_1827
Alide2_1827	PF11795	Alide2_1827
Alide2_1830	PF01527	Transposase
Alide2_1831	PF00665	Integrase core domain
Alide2_1831	PF13276	Alide2_1831
Alide2_1832	PF00440	Bacterial regulatory proteins, tetR family
Alide2_1833	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1833	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1833	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1834	PF02515	CoA-transferase family III
Alide2_1835	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1835	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1836	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1836	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1836	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1837	PF01796	Alide2_1837
Alide2_1837	PF12172	Rubredoxin-like zinc ribbon domain (DUF35_N)
Alide2_1839	PF01614	Bacterial transcriptional regulator
Alide2_1839	PF09339	IclR helix-turn-helix domain
Alide2_1840	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_1841	PF13380	CoA binding domain
Alide2_1841	PF13549	ATP-grasp domain
Alide2_1841	PF13607	Succinyl-CoA ligase like flavodoxin domain
Alide2_1843	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1844	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1844	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1844	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1845	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1847	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1848	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1849	PF01575	MaoC like domain
Alide2_1849	PF13452	N-terminal half of MaoC dehydratase
Alide2_1851	PF03972	MmgE/PrpD family
Alide2_1852	PF09339	IclR helix-turn-helix domain
Alide2_1853	PF01012	Electron transfer flavoprotein domain
Alide2_1854	PF00766	Electron transfer flavoprotein FAD-binding domain
Alide2_1854	PF01012	Electron transfer flavoprotein domain
Alide2_1855	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1856	PF03060	Nitronate monooxygenase
Alide2_1857	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1858	PF12697	Alpha/beta hydrolase family
Alide2_1859	PF02515	CoA-transferase family III
Alide2_1860	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
Alide2_1861	PF03972	MmgE/PrpD family
Alide2_1862	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1863	PF02515	CoA-transferase family III
Alide2_1864	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_1864	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_1864	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_1865	PF01575	MaoC like domain
Alide2_1866	PF13452	N-terminal half of MaoC dehydratase
Alide2_1867	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_1868	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1869	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_1870	PF01614	Bacterial transcriptional regulator
Alide2_1870	PF09339	IclR helix-turn-helix domain
Alide2_1871	PF01614	Bacterial transcriptional regulator
Alide2_1871	PF09339	IclR helix-turn-helix domain
Alide2_1872	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
Alide2_1872	PF00364	Biotin-requiring enzyme
Alide2_1872	PF02785	Biotin carboxylase C-terminal domain
Alide2_1872	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
Alide2_1873	PF01039	Carboxyl transferase domain
Alide2_1875	PF07287	Alide2_1875
Alide2_1876	PF03061	Thioesterase superfamily
Alide2_1879	PF01695	IstB-like ATP binding protein
Alide2_1880	PF00665	Integrase core domain
Alide2_1882	PF11358	Alide2_1882
Alide2_1883	PF00436	Single-strand binding protein family
Alide2_1884	PF01131	DNA topoisomerase
Alide2_1884	PF01396	Alide2_1884
Alide2_1884	PF01751	Toprim domain
Alide2_1885	PF00583	Acetyltransferase (GNAT) family
Alide2_1885	PF03960	ArsC family
Alide2_1886	PF01758	Sodium Bile acid symporter family
Alide2_1887	PF01451	Low molecular weight phosphotyrosine protein phosphatase
Alide2_1889	PF12840	Helix-turn-helix domain
Alide2_1895	PF11284	Alide2_1895
Alide2_1896	PF01507	Phosphoadenosine phosphosulfate reductase family
Alide2_1897	PF12101	Alide2_1897
Alide2_1898	PF11679	Alide2_1898
Alide2_1901	PF06067	Alide2_1901
Alide2_1905	PF00271	Helicase conserved C-terminal domain
Alide2_1909	PF01464	Transglycosylase SLT domain
Alide2_1910	PF11072	Alide2_1910
Alide2_1911	PF12696	TraM recognition site of TraD and TraG
Alide2_1912	PF14348	Alide2_1912
Alide2_1913	PF09686	Alide2_1913
Alide2_1914	PF11660	Alide2_1914
Alide2_1915	PF11190	Alide2_1915
Alide2_1916	PF11990	Alide2_1916
Alide2_1917	PF11444	Alide2_1917
Alide2_1918	PF11920	Alide2_1918
Alide2_1921	PF11130	Alide2_1921
Alide2_1922	PF13462	Thioredoxin
Alide2_1924	PF00440	Bacterial regulatory proteins, tetR family
Alide2_1924	PF08359	YsiA-like protein, C-terminal region
Alide2_1925	PF16576	Alide2_1925
Alide2_1926	PF02687	Alide2_1926
Alide2_1926	PF12704	MacB-like periplasmic core domain
Alide2_1927	PF00005	ABC transporter
Alide2_1928	PF01322	Cytochrome C'
Alide2_1929	PF02321	Outer membrane efflux protein
Alide2_1930	PF00665	Integrase core domain
Alide2_1930	PF09299	Mu transposase, C-terminal
Alide2_1930	PF13518	Helix-turn-helix domain
Alide2_1931	PF05621	Alide2_1931
Alide2_1932	PF06527	Alide2_1932
Alide2_1934	PF09509	Alide2_1934
Alide2_1935	PF01636	Phosphotransferase enzyme family
Alide2_1936	PF00005	ABC transporter
Alide2_1936	PF00664	ABC transporter transmembrane region
Alide2_1937	PF00005	ABC transporter
Alide2_1937	PF00664	ABC transporter transmembrane region
Alide2_1939	PF07485	Alide2_1939
Alide2_1941	PF09828	Alide2_1941
Alide2_1942	PF00581	Rhodanese-like domain
Alide2_1942	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
Alide2_1943	PF02417	Alide2_1943
Alide2_1944	PF09828	Alide2_1944
Alide2_1945	PF00239	Resolvase, N terminal domain
Alide2_1946	PF11809	Alide2_1946
Alide2_1947	PF05052	Alide2_1947
Alide2_1948	PF13411	MerR HTH family regulatory protein
Alide2_1949	PF00403	Heavy-metal-associated domain
Alide2_1949	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Alide2_1949	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_1950	PF03203	Alide2_1950
Alide2_1951	PF00403	Heavy-metal-associated domain
Alide2_1952	PF02411	Alide2_1952
Alide2_1953	PF00376	MerR family regulatory protein
Alide2_1953	PF09278	MerR, DNA binding
Alide2_1956	PF07511	Alide2_1956
Alide2_1957	PF06834	Alide2_1957
Alide2_1960	PF07916	Alide2_1960
Alide2_1961	PF12553	Alide2_1961
Alide2_1962	PF11663	Alide2_1962
Alide2_1963	PF15937	Alide2_1963
Alide2_1964	PF07514	Putative helicase
Alide2_1964	PF07515	Protein of unknown function (DUF1528)
Alide2_1965	PF01381	Helix-turn-helix
Alide2_1966	PF03466	LysR substrate binding domain
Alide2_1967	PF00589	Phage integrase family
Alide2_1967	PF13356	Domain of unknown function (DUF4102)
Alide2_1968	PF02082	Transcriptional regulator
Alide2_1970	PF02666	Alide2_1970
Alide2_1971	PF00571	CBS domain
Alide2_1971	PF04982	Alide2_1971
Alide2_1972	PF01176	Translation initiation factor 1A / IF-1
Alide2_1973	PF00990	GGDEF domain
Alide2_1974	PF07786	Alide2_1974
Alide2_1975	PF00216	Bacterial DNA-binding protein
Alide2_1976	PF00575	S1 RNA binding domain
Alide2_1977	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Alide2_1977	PF02224	Cytidylate kinase
Alide2_1978	PF02153	Prephenate dehydrogenase
Alide2_1979	PF00800	Prephenate dehydratase
Alide2_1979	PF01817	Chorismate mutase type II
Alide2_1979	PF01842	ACT domain
Alide2_1980	PF00266	Aminotransferase class-V
Alide2_1981	PF00521	DNA gyrase/topoisomerase IV, subunit A
Alide2_1981	PF03989	DNA gyrase C-terminal domain, beta-propeller
Alide2_1982	PF00691	OmpA family
Alide2_1983	PF13489	Methyltransferase domain
Alide2_1984	PF13419	Haloacid dehalogenase-like hydrolase
Alide2_1985	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_1985	PF03466	LysR substrate binding domain
Alide2_1986	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
Alide2_1986	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Alide2_1987	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_1988	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
Alide2_1989	PF00005	ABC transporter
Alide2_1990	PF01936	NYN domain
Alide2_1990	PF12872	OST-HTH/LOTUS domain
Alide2_1993	PF00239	Resolvase, N terminal domain
Alide2_1993	PF07508	Recombinase
Alide2_1994	PF11149	Alide2_1994
Alide2_1996	PF12844	Helix-turn-helix domain
Alide2_2002	PF13479	Alide2_2002
Alide2_2004	PF10546	Alide2_2004
Alide2_2008	PF08706	Alide2_2008
Alide2_2012	PF01555	DNA methylase
Alide2_2012	PF02195	ParB-like nuclease domain
Alide2_2013	PF01555	DNA methylase
Alide2_2013	PF02195	ParB-like nuclease domain
Alide2_2015	PF11994	Alide2_2015
Alide2_2018	PF05876	Alide2_2018
Alide2_2022	PF05136	Alide2_2022
Alide2_2023	PF01343	Peptidase family S49
Alide2_2024	PF02924	Bacteriophage lambda head decoration protein D
Alide2_2025	PF03864	Phage major capsid protein E
Alide2_2043	PF00959	Phage lysozyme
Alide2_2049	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
Alide2_2049	PF04851	Type III restriction enzyme, res subunit
Alide2_2050	PF01420	Type I restriction modification DNA specificity domain
Alide2_2051	PF02384	N-6 DNA Methylase
Alide2_2051	PF12161	HsdM N-terminal domain
Alide2_2052	PF03235	Alide2_2052
Alide2_2052	PF07510	Alide2_2052
Alide2_2053	PF13280	Alide2_2053
Alide2_2054	PF00959	Phage lysozyme
Alide2_2055	PF13180	PDZ domain
Alide2_2055	PF13365	Trypsin-like peptidase domain
Alide2_2056	PF01435	Peptidase family M48
Alide2_2057	PF06146	Alide2_2057
Alide2_2058	PF00085	Thioredoxin
Alide2_2059	PF00004	ATPase family associated with various cellular activities (AAA)
Alide2_2059	PF01434	Peptidase family M41
Alide2_2059	PF06480	FtsH Extracellular
Alide2_2060	PF13091	PLD-like domain
Alide2_2060	PF13396	Alide2_2060
Alide2_2061	PF00004	ATPase family associated with various cellular activities (AAA)
Alide2_2061	PF02861	Clp amino terminal domain
Alide2_2061	PF07724	AAA domain (Cdc48 subfamily)
Alide2_2061	PF10431	C-terminal, D2-small domain, of ClpB protein
Alide2_2062	PF00011	Hsp20/alpha crystallin family
Alide2_2063	PF12728	Helix-turn-helix domain
Alide2_2065	PF02586	Uncharacterised ACR, COG2135
Alide2_2066	PF00717	Peptidase S24-like
Alide2_2067	PF00817	impB/mucB/samB family
Alide2_2067	PF11799	impB/mucB/samB family C-terminal domain
Alide2_2067	PF13438	Alide2_2067
Alide2_2070	PF00239	Resolvase, N terminal domain
Alide2_2070	PF07508	Recombinase
Alide2_2071	PF11149	Alide2_2071
Alide2_2073	PF12844	Helix-turn-helix domain
Alide2_2076	PF01527	Transposase
Alide2_2077	PF00665	Integrase core domain
Alide2_2077	PF13276	Alide2_2077
Alide2_2078	PF04960	Glutaminase
Alide2_2079	PF01546	Peptidase family M20/M25/M40
Alide2_2079	PF07687	Peptidase dimerisation domain
Alide2_2080	PF00083	Sugar (and other) transporter
Alide2_2081	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2081	PF03466	LysR substrate binding domain
Alide2_2083	PF13673	Acetyltransferase (GNAT) domain
Alide2_2084	PF08681	Protein of unknown function (DUF1778)
Alide2_2085	PF07690	Major Facilitator Superfamily
Alide2_2086	PF00106	short chain dehydrogenase
Alide2_2087	PF03061	Thioesterase superfamily
Alide2_2088	PF00107	Zinc-binding dehydrogenase
Alide2_2088	PF16884	Alide2_2088
Alide2_2089	PF13410	Glutathione S-transferase, C-terminal domain
Alide2_2089	PF13417	Glutathione S-transferase, N-terminal domain
Alide2_2090	PF07603	Alide2_2090
Alide2_2091	PF07690	Major Facilitator Superfamily
Alide2_2092	PF00875	DNA photolyase
Alide2_2092	PF03441	FAD binding domain of DNA photolyase
Alide2_2093	PF05425	Alide2_2093
Alide2_2094	PF01717	Cobalamin-independent synthase, Catalytic domain
Alide2_2094	PF08267	Cobalamin-independent synthase, N-terminal domain
Alide2_2095	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2095	PF03466	LysR substrate binding domain
Alide2_2098	PF11804	Alide2_2098
Alide2_2099	PF11454	Alide2_2099
Alide2_2100	PF13714	Phosphoenolpyruvate phosphomutase
Alide2_2101	PF04303	PrpF protein
Alide2_2102	PF00330	Aconitase family (aconitate hydratase)
Alide2_2102	PF00694	Aconitase C-terminal domain
Alide2_2103	PF00285	Citrate synthase
Alide2_2104	PF03061	Thioesterase superfamily
Alide2_2105	PF01381	Helix-turn-helix
Alide2_2105	PF06114	Domain of unknown function (DUF955)
Alide2_2105	PF09856	Alide2_2105
Alide2_2106	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2106	PF03466	LysR substrate binding domain
Alide2_2107	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Alide2_2109	PF01479	S4 domain
Alide2_2110	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_2110	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_2110	PF08521	Alide2_2110
Alide2_2111	PF00072	Response regulator receiver domain
Alide2_2111	PF00486	Transcriptional regulatory protein, C terminal
Alide2_2112	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2113	PF07331	Alide2_2113
Alide2_2114	PF01970	Alide2_2114
Alide2_2115	PF10605	Alide2_2115
Alide2_2116	PF04366	Alide2_2116
Alide2_2118	PF04143	Alide2_2118
Alide2_2119	PF00581	Rhodanese-like domain
Alide2_2120	PF00762	Ferrochelatase
Alide2_2121	PF13419	Haloacid dehalogenase-like hydrolase
Alide2_2122	PF00122	E1-E2 ATPase
Alide2_2122	PF00689	Cation transporting ATPase, C-terminus
Alide2_2122	PF00690	Cation transporter/ATPase, N-terminus
Alide2_2122	PF00702	haloacid dehalogenase-like hydrolase
Alide2_2123	PF12697	Alpha/beta hydrolase family
Alide2_2124	PF01053	Cys/Met metabolism PLP-dependent enzyme
Alide2_2125	PF00571	CBS domain
Alide2_2126	PF01264	Chorismate synthase
Alide2_2127	PF03477	ATP cone domain
Alide2_2128	PF00464	Serine hydroxymethyltransferase
Alide2_2129	PF01464	Transglycosylase SLT domain
Alide2_2130	PF00691	OmpA family
Alide2_2130	PF05359	Alide2_2130
Alide2_2131	PF03993	Alide2_2131
Alide2_2132	PF00575	S1 RNA binding domain
Alide2_2132	PF00773	RNB domain
Alide2_2132	PF08206	Ribonuclease B OB domain
Alide2_2133	PF00106	short chain dehydrogenase
Alide2_2134	PF00034	Cytochrome c
Alide2_2135	PF00034	Cytochrome c
Alide2_2135	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
Alide2_2136	PF00085	Thioredoxin
Alide2_2137	PF02576	Uncharacterised BCR, YhbC family COG0779
Alide2_2138	PF00575	S1 RNA binding domain
Alide2_2138	PF08529	NusA N-terminal domain
Alide2_2138	PF13184	NusA-like KH domain
Alide2_2138	PF14520	Helix-hairpin-helix domain
Alide2_2139	PF00009	Elongation factor Tu GTP binding domain
Alide2_2139	PF04760	Translation initiation factor IF-2, N-terminal region
Alide2_2139	PF08364	Alide2_2139
Alide2_2139	PF11987	Translation-initiation factor 2
Alide2_2140	PF02033	Ribosome-binding factor A
Alide2_2141	PF01509	TruB family pseudouridylate synthase (N terminal domain)
Alide2_2141	PF09157	Pseudouridine synthase II TruB, C-terminal
Alide2_2141	PF16198	Alide2_2141
Alide2_2142	PF00009	Elongation factor Tu GTP binding domain
Alide2_2142	PF00679	Elongation factor G C-terminus
Alide2_2142	PF03144	Elongation factor Tu domain 2
Alide2_2143	PF04072	Leucine carboxyl methyltransferase
Alide2_2144	PF16113	Alide2_2144
Alide2_2146	PF04542	Sigma-70 region 2
Alide2_2146	PF08281	Sigma-70, region 4
Alide2_2147	PF03640	Alide2_2147
Alide2_2148	PF01668	SmpB protein
Alide2_2149	PF03364	Polyketide cyclase / dehydrase and lipid transport
Alide2_2150	PF03658	RnfH family Ubiquitin
Alide2_2151	PF13511	Alide2_2151
Alide2_2152	PF00478	IMP dehydrogenase / GMP reductase domain
Alide2_2152	PF00571	CBS domain
Alide2_2153	PF00117	Glutamine amidotransferase class-I
Alide2_2153	PF00958	GMP synthase C terminal domain
Alide2_2153	PF02540	NAD synthase
Alide2_2154	PF00665	Integrase core domain
Alide2_2155	PF01695	IstB-like ATP binding protein
Alide2_2156	PF00589	Phage integrase family
Alide2_2157	PF00589	Phage integrase family
Alide2_2157	PF02899	Phage integrase, N-terminal SAM-like domain
Alide2_2159	PF11171	Alide2_2159
Alide2_2160	PF06067	Alide2_2160
Alide2_2161	PF02195	ParB-like nuclease domain
Alide2_2164	PF00403	Heavy-metal-associated domain
Alide2_2165	PF02411	Alide2_2165
Alide2_2166	PF00376	MerR family regulatory protein
Alide2_2166	PF09278	MerR, DNA binding
Alide2_2167	PF00892	EamA-like transporter family
Alide2_2169	PF05284	Alide2_2169
Alide2_2170	PF01381	Helix-turn-helix
Alide2_2171	PF11171	Alide2_2171
Alide2_2172	PF01527	Transposase
Alide2_2173	PF00665	Integrase core domain
Alide2_2173	PF13276	Alide2_2173
Alide2_2174	PF10074	Alide2_2174
Alide2_2175	PF12728	Helix-turn-helix domain
Alide2_2176	PF10134	Alide2_2176
Alide2_2177	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
Alide2_2179	PF11000	Alide2_2179
Alide2_2180	PF10502	Signal peptidase, peptidase S26
Alide2_2181	PF11843	Alide2_2181
Alide2_2182	PF07731	Multicopper oxidase
Alide2_2182	PF07732	Multicopper oxidase
Alide2_2184	PF13663	Alide2_2184
Alide2_2185	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_2185	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_2186	PF00072	Response regulator receiver domain
Alide2_2186	PF00486	Transcriptional regulatory protein, C terminal
Alide2_2187	PF00394	Multicopper oxidase
Alide2_2187	PF07731	Multicopper oxidase
Alide2_2187	PF07732	Multicopper oxidase
Alide2_2188	PF05275	Alide2_2188
Alide2_2189	PF00127	Copper binding proteins, plastocyanin/azurin family
Alide2_2190	PF11604	Copper binding periplasmic protein CusF
Alide2_2192	PF11666	Alide2_2192
Alide2_2193	PF04191	Phospholipid methyltransferase
Alide2_2195	PF00403	Heavy-metal-associated domain
Alide2_2196	PF11339	Alide2_2196
Alide2_2197	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
Alide2_2198	PF00122	E1-E2 ATPase
Alide2_2198	PF00702	haloacid dehalogenase-like hydrolase
Alide2_2201	PF02321	Outer membrane efflux protein
Alide2_2202	PF11604	Copper binding periplasmic protein CusF
Alide2_2202	PF16576	Alide2_2202
Alide2_2203	PF00873	AcrB/AcrD/AcrF family
Alide2_2205	PF01695	IstB-like ATP binding protein
Alide2_2206	PF00665	Integrase core domain
Alide2_2208	PF00589	Phage integrase family
Alide2_2208	PF13356	Domain of unknown function (DUF4102)
Alide2_2208	PF14659	Phage integrase, N-terminal SAM-like domain
Alide2_2209	PF00285	Citrate synthase
Alide2_2210	PF03937	Flavinator of succinate dehydrogenase
Alide2_2211	PF13085	2Fe-2S iron-sulfur cluster binding domain
Alide2_2211	PF13534	4Fe-4S dicluster domain
Alide2_2212	PF00890	FAD binding domain
Alide2_2212	PF02910	Fumarate reductase flavoprotein C-term
Alide2_2213	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
Alide2_2214	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
Alide2_2215	PF00392	Bacterial regulatory proteins, gntR family
Alide2_2215	PF07702	UTRA domain
Alide2_2216	PF00056	lactate/malate dehydrogenase, NAD binding domain
Alide2_2216	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
Alide2_2217	PF13649	Methyltransferase domain
Alide2_2219	PF00330	Aconitase family (aconitate hydratase)
Alide2_2219	PF06434	Aconitate hydratase 2 N-terminus
Alide2_2219	PF11791	Aconitate B N-terminal domain
Alide2_2220	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2220	PF03466	LysR substrate binding domain
Alide2_2221	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_2221	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_2222	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2223	PF02515	CoA-transferase family III
Alide2_2224	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Alide2_2224	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_2225	PF00111	2Fe-2S iron-sulfur cluster binding domain
Alide2_2225	PF01799	[2Fe-2S] binding domain
Alide2_2226	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
Alide2_2226	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
Alide2_2227	PF00941	FAD binding domain in molybdopterin dehydrogenase
Alide2_2228	PF07728	AAA domain (dynein-related subfamily)
Alide2_2229	PF05762	VWA domain containing CoxE-like protein
Alide2_2230	PF06240	Carbon monoxide dehydrogenase subunit G (CoxG)
Alide2_2231	PF02625	XdhC and CoxI family
Alide2_2231	PF13478	XdhC Rossmann domain
Alide2_2232	PF12804	MobA-like NTP transferase domain
Alide2_2235	PF01593	Flavin containing amine oxidoreductase
Alide2_2236	PF03706	Alide2_2236
Alide2_2237	PF00535	Glycosyl transferase family 2
Alide2_2238	PF01136	Alide2_2238
Alide2_2238	PF16325	Alide2_2238
Alide2_2240	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2240	PF03466	LysR substrate binding domain
Alide2_2242	PF01609	Transposase DDE domain
Alide2_2242	PF05598	Alide2_2242
Alide2_2243	PF00072	Response regulator receiver domain
Alide2_2243	PF02954	Bacterial regulatory protein, Fis family
Alide2_2244	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_2245	PF02104	Alide2_2245
Alide2_2246	PF03626	Alide2_2246
Alide2_2247	PF00510	Cytochrome c oxidase subunit III
Alide2_2248	PF00115	Cytochrome C and Quinol oxidase polypeptide I
Alide2_2249	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
Alide2_2249	PF06481	COX Aromatic Rich Motif
Alide2_2250	PF07690	Major Facilitator Superfamily
Alide2_2251	PF13103	TonB C terminal
Alide2_2252	PF02472	Biopolymer transport protein ExbD/TolR
Alide2_2253	PF01618	Alide2_2253
Alide2_2254	PF03061	Thioesterase superfamily
Alide2_2255	PF00155	Aminotransferase class I and II
Alide2_2256	PF01029	NusB family
Alide2_2257	PF00885	6,7-dimethyl-8-ribityllumazine synthase
Alide2_2258	PF00925	GTP cyclohydrolase II
Alide2_2258	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
Alide2_2259	PF00111	2Fe-2S iron-sulfur cluster binding domain
Alide2_2261	PF00106	short chain dehydrogenase
Alide2_2262	PF04262	Glutamate-cysteine ligase
Alide2_2263	PF12805	Alide2_2263
Alide2_2263	PF13515	Alide2_2263
Alide2_2265	PF01042	Endoribonuclease L-PSP
Alide2_2266	PF04324	BFD-like [2Fe-2S] binding domain
Alide2_2266	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_2267	PF13510	2Fe-2S iron-sulfur cluster binding domain
Alide2_2268	PF01266	FAD dependent oxidoreductase
Alide2_2269	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2270	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2270	PF03466	LysR substrate binding domain
Alide2_2271	PF01926	50S ribosome-binding GTPase
Alide2_2273	PF00849	RNA pseudouridylate synthase
Alide2_2275	PF02272	DHHA1 domain
Alide2_2276	PF05977	Transmembrane secretion effector
Alide2_2277	PF00565	Staphylococcal nuclease homologue
Alide2_2278	PF00892	EamA-like transporter family
Alide2_2279	PF00849	RNA pseudouridylate synthase
Alide2_2280	PF01551	Peptidase family M23
Alide2_2281	PF00206	Lyase
Alide2_2281	PF10415	Fumarase C C-terminus
Alide2_2282	PF03724	META domain
Alide2_2282	PF14302	Alide2_2282
Alide2_2283	PF06041	Bacterial protein of unknown function (DUF924)
Alide2_2284	PF00749	tRNA synthetases class I (E and Q), catalytic domain
Alide2_2284	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
Alide2_2286	PF01220	Dehydroquinase class II
Alide2_2287	PF12697	Alpha/beta hydrolase family
Alide2_2288	PF00472	RF-1 domain
Alide2_2289	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
Alide2_2290	PF02230	Phospholipase/Carboxylesterase
Alide2_2291	PF11219	Alide2_2291
Alide2_2292	PF01037	AsnC family
Alide2_2292	PF13412	Winged helix-turn-helix DNA-binding
Alide2_2293	PF00456	Transketolase, thiamine diphosphate binding domain
Alide2_2294	PF01425	Amidase
Alide2_2295	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2296	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2296	PF03466	LysR substrate binding domain
Alide2_2297	PF00392	Bacterial regulatory proteins, gntR family
Alide2_2297	PF07729	FCD domain
Alide2_2298	PF07690	Major Facilitator Superfamily
Alide2_2299	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
Alide2_2299	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
Alide2_2300	PF01370	NAD dependent epimerase/dehydratase family
Alide2_2301	PF07005	Protein of unknown function, DUF1537
Alide2_2301	PF17042	Alide2_2301
Alide2_2302	PF00596	Class II Aldolase and Adducin N-terminal domain
Alide2_2303	PF01261	Xylose isomerase-like TIM barrel
Alide2_2304	PF06167	Glucose-regulated metallo-peptidase M90
Alide2_2305	PF00149	Calcineurin-like phosphoesterase
Alide2_2306	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Alide2_2307	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Alide2_2308	PF03734	L,D-transpeptidase catalytic domain
Alide2_2309	PF13414	TPR repeat
Alide2_2309	PF13432	Tetratricopeptide repeat
Alide2_2310	PF01406	tRNA synthetases class I (C) catalytic domain
Alide2_2310	PF09190	DALR domain
Alide2_2311	PF00730	HhH-GPD superfamily base excision DNA repair protein
Alide2_2312	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
Alide2_2313	PF01171	PP-loop family
Alide2_2313	PF09179	TilS substrate binding domain
Alide2_2314	PF00696	Amino acid kinase family
Alide2_2314	PF01842	ACT domain
Alide2_2314	PF13840	ACT domain
Alide2_2315	PF00654	Voltage gated chloride channel
Alide2_2316	PF00440	Bacterial regulatory proteins, tetR family
Alide2_2316	PF08359	YsiA-like protein, C-terminal region
Alide2_2317	PF16576	Alide2_2317
Alide2_2318	PF02687	Alide2_2318
Alide2_2318	PF12704	MacB-like periplasmic core domain
Alide2_2319	PF00005	ABC transporter
Alide2_2320	PF01471	Putative peptidoglycan binding domain
Alide2_2320	PF13406	Transglycosylase SLT domain
Alide2_2321	PF00929	Exonuclease
Alide2_2321	PF08411	Exonuclease C-terminal
Alide2_2322	PF02146	Sir2 family
Alide2_2323	PF01594	Alide2_2323
Alide2_2323	PF13185	GAF domain
Alide2_2324	PF13302	Acetyltransferase (GNAT) domain
Alide2_2325	PF14681	Uracil phosphoribosyltransferase
Alide2_2326	PF00291	Pyridoxal-phosphate dependent enzyme
Alide2_2327	PF01709	Transcriptional regulator
Alide2_2329	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
Alide2_2329	PF12801	Alide2_2329
Alide2_2329	PF13746	4Fe-4S dicluster domain
Alide2_2330	PF01654	Alide2_2330
Alide2_2331	PF02322	Alide2_2331
Alide2_2332	PF10617	Alide2_2332
Alide2_2333	PF04172	Alide2_2333
Alide2_2334	PF03788	Alide2_2334
Alide2_2335	PF00155	Aminotransferase class I and II
Alide2_2335	PF00392	Bacterial regulatory proteins, gntR family
Alide2_2336	PF00043	Glutathione S-transferase, C-terminal domain
Alide2_2336	PF02798	Glutathione S-transferase, N-terminal domain
Alide2_2337	PF05872	Alide2_2337
Alide2_2338	PF01709	Transcriptional regulator
Alide2_2339	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
Alide2_2339	PF02843	Phosphoribosylglycinamide synthetase, C domain
Alide2_2339	PF02844	Phosphoribosylglycinamide synthetase, N domain
Alide2_2340	PF01218	Coproporphyrinogen III oxidase
Alide2_2341	PF02410	Oligomerisation domain
Alide2_2342	PF02590	Predicted SPOUT methyltransferase
Alide2_2343	PF02545	Maf-like protein
Alide2_2344	PF00027	Cyclic nucleotide-binding domain
Alide2_2344	PF13545	Crp-like helix-turn-helix domain
Alide2_2345	PF02239	Cytochrome D1 heme domain
Alide2_2345	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
Alide2_2346	PF04055	Radical SAM superfamily
Alide2_2346	PF13353	4Fe-4S single cluster domain
Alide2_2349	PF02239	Cytochrome D1 heme domain
Alide2_2350	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
Alide2_2351	PF02239	Cytochrome D1 heme domain
Alide2_2351	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
Alide2_2352	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
Alide2_2353	PF10150	Ribonuclease E/G family
Alide2_2354	PF00990	GGDEF domain
Alide2_2355	PF03466	LysR substrate binding domain
Alide2_2356	PF00155	Aminotransferase class I and II
Alide2_2357	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2357	PF03466	LysR substrate binding domain
Alide2_2358	PF01903	CbiX
Alide2_2359	PF03739	Alide2_2359
Alide2_2360	PF03739	Alide2_2360
Alide2_2361	PF00883	Cytosol aminopeptidase family, catalytic domain
Alide2_2361	PF02789	Cytosol aminopeptidase family, N-terminal domain
Alide2_2362	PF04364	DNA polymerase III chi subunit, HolC
Alide2_2364	PF13458	Periplasmic binding protein
Alide2_2365	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
Alide2_2365	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Alide2_2370	PF10014	2OG-Fe dioxygenase
Alide2_2371	PF00582	Universal stress protein family
Alide2_2372	PF01814	Hemerythrin HHE cation binding domain
Alide2_2373	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2374	PF00108	Thiolase, N-terminal domain
Alide2_2374	PF02803	Thiolase, C-terminal domain
Alide2_2375	PF00106	short chain dehydrogenase
Alide2_2376	PF00849	RNA pseudouridylate synthase
Alide2_2377	PF00072	Response regulator receiver domain
Alide2_2377	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_2377	PF00989	PAS fold
Alide2_2377	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_2377	PF13188	PAS domain
Alide2_2378	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
Alide2_2379	PF00072	Response regulator receiver domain
Alide2_2379	PF00196	Bacterial regulatory proteins, luxR family
Alide2_2380	PF07730	Histidine kinase
Alide2_2382	PF08534	Redoxin
Alide2_2383	PF13563	2'-5' RNA ligase superfamily
Alide2_2385	PF13801	Heavy-metal resistance
Alide2_2386	PF13490	Putative zinc-finger
Alide2_2387	PF04542	Sigma-70 region 2
Alide2_2387	PF08281	Sigma-70, region 4
Alide2_2389	PF05958	tRNA (Uracil-5-)-methyltransferase
Alide2_2390	PF00291	Pyridoxal-phosphate dependent enzyme
Alide2_2391	PF01205	Uncharacterized protein family UPF0029
Alide2_2391	PF09186	Domain of unknown function (DUF1949)
Alide2_2392	PF00127	Copper binding proteins, plastocyanin/azurin family
Alide2_2393	PF04055	Radical SAM superfamily
Alide2_2393	PF08497	Alide2_2393
Alide2_2393	PF11842	Alide2_2393
Alide2_2394	PF00155	Aminotransferase class I and II
Alide2_2395	PF00271	Helicase conserved C-terminal domain
Alide2_2395	PF02151	UvrB/uvrC motif
Alide2_2395	PF04851	Type III restriction enzyme, res subunit
Alide2_2395	PF12344	Ultra-violet resistance protein B
Alide2_2396	PF02082	Transcriptional regulator
Alide2_2397	PF00266	Aminotransferase class-V
Alide2_2398	PF01592	NifU-like N terminal domain
Alide2_2399	PF01521	Iron-sulphur cluster biosynthesis
Alide2_2400	PF07743	HSCB C-terminal oligomerisation domain
Alide2_2401	PF00012	Hsp70 protein
Alide2_2402	PF00111	2Fe-2S iron-sulfur cluster binding domain
Alide2_2403	PF00929	Exonuclease
Alide2_2404	PF01266	FAD dependent oxidoreductase
Alide2_2405	PF05957	Alide2_2405
Alide2_2406	PF07332	Alide2_2406
Alide2_2408	PF01180	Dihydroorotate dehydrogenase
Alide2_2409	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
Alide2_2410	PF00462	Glutaredoxin
Alide2_2410	PF13511	Alide2_2410
Alide2_2411	PF01432	Peptidase family M3
Alide2_2412	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
Alide2_2412	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Alide2_2413	PF00072	Response regulator receiver domain
Alide2_2413	PF00196	Bacterial regulatory proteins, luxR family
Alide2_2414	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_2414	PF00989	PAS fold
Alide2_2414	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_2415	PF00456	Transketolase, thiamine diphosphate binding domain
Alide2_2416	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Alide2_2416	PF00364	Biotin-requiring enzyme
Alide2_2416	PF02817	e3 binding domain
Alide2_2417	PF00364	Biotin-requiring enzyme
Alide2_2417	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Alide2_2417	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_2420	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2421	PF02661	Fic/DOC family
Alide2_2422	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2422	PF03466	LysR substrate binding domain
Alide2_2426	PF05717	Alide2_2426
Alide2_2427	PF03050	Alide2_2427
Alide2_2427	PF13005	Alide2_2427
Alide2_2427	PF13007	Alide2_2427
Alide2_2427	PF13817	Alide2_2427
Alide2_2429	PF01527	Transposase
Alide2_2431	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2432	PF10672	S-adenosylmethionine-dependent methyltransferase
Alide2_2434	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
Alide2_2434	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
Alide2_2436	PF01878	EVE domain
Alide2_2437	PF04226	Alide2_2437
Alide2_2438	PF00877	NlpC/P60 family
Alide2_2439	PF00324	Amino acid permease
Alide2_2440	PF07690	Major Facilitator Superfamily
Alide2_2441	PF00563	EAL domain
Alide2_2441	PF00990	GGDEF domain
Alide2_2441	PF03924	CHASE domain
Alide2_2441	PF13426	PAS domain
Alide2_2442	PF02694	Alide2_2442
Alide2_2443	PF07589	Alide2_2443
Alide2_2444	PF02463	RecF/RecN/SMC N terminal domain
Alide2_2444	PF06470	SMC proteins Flexible Hinge Domain
Alide2_2446	PF00533	BRCA1 C Terminus (BRCT) domain
Alide2_2446	PF01653	NAD-dependent DNA ligase adenylation domain
Alide2_2446	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
Alide2_2446	PF03120	NAD-dependent DNA ligase OB-fold domain
Alide2_2446	PF12826	Helix-hairpin-helix motif
Alide2_2446	PF14520	Helix-hairpin-helix domain
Alide2_2447	PF01734	Patatin-like phospholipase
Alide2_2448	PF00905	Penicillin binding protein transpeptidase domain
Alide2_2448	PF00912	Transglycosylase
Alide2_2449	PF07690	Major Facilitator Superfamily
Alide2_2450	PF00293	NUDIX domain
Alide2_2450	PF14803	Nudix N-terminal
Alide2_2451	PF01557	Fumarylacetoacetate (FAA) hydrolase family
Alide2_2452	PF13417	Glutathione S-transferase, N-terminal domain
Alide2_2453	PF02578	Multi-copper polyphenol oxidoreductase laccase
Alide2_2455	PF07167	Alide2_2455
Alide2_2456	PF00108	Thiolase, N-terminal domain
Alide2_2456	PF02803	Thiolase, C-terminal domain
Alide2_2457	PF00106	short chain dehydrogenase
Alide2_2458	PF00005	ABC transporter
Alide2_2458	PF12848	ABC transporter
Alide2_2459	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2460	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_2460	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_2460	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_2461	PF00501	AMP-binding enzyme
Alide2_2461	PF13193	AMP-binding enzyme C-terminal domain
Alide2_2462	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2462	PF03466	LysR substrate binding domain
Alide2_2463	PF05175	Methyltransferase small domain
Alide2_2464	PF01546	Peptidase family M20/M25/M40
Alide2_2464	PF07687	Peptidase dimerisation domain
Alide2_2465	PF00437	Type II/IV secretion system protein
Alide2_2466	PF14602	Hexapeptide repeat of succinyl-transferase
Alide2_2466	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
Alide2_2467	PF00155	Aminotransferase class I and II
Alide2_2468	PF04060	Putative Fe-S cluster
Alide2_2468	PF14697	4Fe-4S dicluster domain
Alide2_2469	PF06850	Alide2_2469
Alide2_2470	PF04607	Region found in RelA / SpoT proteins
Alide2_2471	PF01207	Dihydrouridine synthase (Dus)
Alide2_2472	PF01575	MaoC like domain
Alide2_2473	PF00440	Bacterial regulatory proteins, tetR family
Alide2_2474	PF03435	Saccharopine dehydrogenase
Alide2_2474	PF16653	Alide2_2474
Alide2_2475	PF00501	AMP-binding enzyme
Alide2_2476	PF00392	Bacterial regulatory proteins, gntR family
Alide2_2476	PF07729	FCD domain
Alide2_2477	PF00682	HMGL-like
Alide2_2478	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2479	PF02515	CoA-transferase family III
Alide2_2480	PF01381	Helix-turn-helix
Alide2_2480	PF06114	Domain of unknown function (DUF955)
Alide2_2480	PF09856	Alide2_2480
Alide2_2481	PF01642	Methylmalonyl-CoA mutase
Alide2_2481	PF02310	B12 binding domain
Alide2_2482	PF03308	ArgK protein
Alide2_2483	PF01039	Carboxyl transferase domain
Alide2_2484	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
Alide2_2484	PF00364	Biotin-requiring enzyme
Alide2_2484	PF02785	Biotin carboxylase C-terminal domain
Alide2_2484	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
Alide2_2485	PF13669	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Alide2_2486	PF04055	Radical SAM superfamily
Alide2_2486	PF06968	Biotin and Thiamin Synthesis associated domain
Alide2_2487	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2488	PF00072	Response regulator receiver domain
Alide2_2488	PF00486	Transcriptional regulatory protein, C terminal
Alide2_2489	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_2489	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_2489	PF08521	Alide2_2489
Alide2_2490	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2491	PF02566	OsmC-like protein
Alide2_2492	PF00581	Rhodanese-like domain
Alide2_2493	PF11127	Protein of unknown function (DUF2892)
Alide2_2494	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_2495	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_2496	PF02321	Outer membrane efflux protein
Alide2_2497	PF00873	AcrB/AcrD/AcrF family
Alide2_2498	PF16576	Alide2_2498
Alide2_2499	PF01022	Bacterial regulatory protein, arsR family
Alide2_2501	PF03328	HpcH/HpaI aldolase/citrate lyase family
Alide2_2502	PF03737	Demethylmenaquinone methyltransferase
Alide2_2503	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2504	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2505	PF00356	Bacterial regulatory proteins, lacI family
Alide2_2505	PF13377	Periplasmic binding protein-like domain
Alide2_2506	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_2507	PF00815	Histidinol dehydrogenase
Alide2_2508	PF08242	Methyltransferase domain
Alide2_2509	PF03942	Alide2_2509
Alide2_2510	PF02627	Carboxymuconolactone decarboxylase family
Alide2_2511	PF00884	Sulfatase
Alide2_2511	PF08019	Alide2_2511
Alide2_2512	PF01569	PAP2 superfamily
Alide2_2513	PF00072	Response regulator receiver domain
Alide2_2513	PF00486	Transcriptional regulatory protein, C terminal
Alide2_2514	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_2514	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_2515	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_2516	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2517	PF00107	Zinc-binding dehydrogenase
Alide2_2517	PF08240	Alcohol dehydrogenase GroES-like domain
Alide2_2518	PF02515	CoA-transferase family III
Alide2_2519	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_2519	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_2519	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_2521	PF02515	CoA-transferase family III
Alide2_2522	PF00440	Bacterial regulatory proteins, tetR family
Alide2_2523	PF05187	Electron transfer flavoprotein-ubiquinone oxidoreductase
Alide2_2523	PF13450	NAD(P)-binding Rossmann-like domain
Alide2_2524	PF04392	ABC transporter substrate binding protein
Alide2_2525	PF02653	Alide2_2525
Alide2_2526	PF00005	ABC transporter
Alide2_2527	PF00158	Sigma-54 interaction domain
Alide2_2527	PF01590	GAF domain
Alide2_2527	PF02954	Bacterial regulatory protein, Fis family
Alide2_2528	PF12697	Alpha/beta hydrolase family
Alide2_2529	PF00732	GMC oxidoreductase
Alide2_2529	PF05199	GMC oxidoreductase
Alide2_2532	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Alide2_2533	PF00364	Biotin-requiring enzyme
Alide2_2534	PF02779	Transketolase, pyrimidine binding domain
Alide2_2534	PF02780	Transketolase, C-terminal domain
Alide2_2535	PF00676	Dehydrogenase E1 component
Alide2_2536	PF01037	AsnC family
Alide2_2536	PF13404	AsnC-type helix-turn-helix domain
Alide2_2537	PF03480	Bacterial extracellular solute-binding protein, family 7
Alide2_2538	PF04290	Alide2_2538
Alide2_2539	PF06808	Alide2_2539
Alide2_2540	PF00753	Metallo-beta-lactamase superfamily
Alide2_2541	PF01571	Aminomethyltransferase folate-binding domain
Alide2_2541	PF08669	Glycine cleavage T-protein C-terminal barrel domain
Alide2_2542	PF01597	Glycine cleavage H-protein
Alide2_2543	PF02347	Glycine cleavage system P-protein
Alide2_2544	PF02583	Metal-sensitive transcriptional repressor
Alide2_2545	PF00107	Zinc-binding dehydrogenase
Alide2_2545	PF08240	Alcohol dehydrogenase GroES-like domain
Alide2_2546	PF00756	Putative esterase
Alide2_2548	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2548	PF03466	LysR substrate binding domain
Alide2_2549	PF04055	Radical SAM superfamily
Alide2_2550	PF01272	Transcription elongation factor, GreA/GreB, C-term
Alide2_2550	PF14760	Rnk N-terminus
Alide2_2551	PF01757	Alide2_2551
Alide2_2552	PF03060	Nitronate monooxygenase
Alide2_2553	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_2553	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_2553	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_2553	PF12418	Alide2_2553
Alide2_2553	PF12806	Alide2_2553
Alide2_2554	PF00766	Electron transfer flavoprotein FAD-binding domain
Alide2_2554	PF01012	Electron transfer flavoprotein domain
Alide2_2555	PF01012	Electron transfer flavoprotein domain
Alide2_2556	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_2557	PF00850	Histone deacetylase domain
Alide2_2558	PF07726	ATPase family associated with various cellular activities (AAA)
Alide2_2560	PF01841	Transglutaminase-like superfamily
Alide2_2560	PF11992	Alide2_2560
Alide2_2561	PF13406	Transglycosylase SLT domain
Alide2_2562	PF02779	Transketolase, pyrimidine binding domain
Alide2_2562	PF02780	Transketolase, C-terminal domain
Alide2_2563	PF00456	Transketolase, thiamine diphosphate binding domain
Alide2_2564	PF06808	Alide2_2564
Alide2_2565	PF04290	Alide2_2565
Alide2_2566	PF03480	Bacterial extracellular solute-binding protein, family 7
Alide2_2567	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_2568	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2568	PF03466	LysR substrate binding domain
Alide2_2569	PF00456	Transketolase, thiamine diphosphate binding domain
Alide2_2569	PF02779	Transketolase, pyrimidine binding domain
Alide2_2569	PF02780	Transketolase, C-terminal domain
Alide2_2570	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
Alide2_2570	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Alide2_2571	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2571	PF03466	LysR substrate binding domain
Alide2_2572	PF03601	Alide2_2572
Alide2_2573	PF13458	Periplasmic binding protein
Alide2_2574	PF10001	Alide2_2574
Alide2_2575	PF02687	Alide2_2575
Alide2_2575	PF12704	MacB-like periplasmic core domain
Alide2_2576	PF00005	ABC transporter
Alide2_2577	PF16576	Alide2_2577
Alide2_2578	PF02321	Outer membrane efflux protein
Alide2_2579	PF00814	Glycoprotease family
Alide2_2580	PF00571	CBS domain
Alide2_2581	PF06078	Bacterial protein of unknown function (DUF937)
Alide2_2582	PF13533	Biotin-lipoyl like
Alide2_2583	PF00873	AcrB/AcrD/AcrF family
Alide2_2584	PF02321	Outer membrane efflux protein
Alide2_2585	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
Alide2_2585	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
Alide2_2585	PF04324	BFD-like [2Fe-2S] binding domain
Alide2_2585	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_2586	PF00355	Rieske [2Fe-2S] domain
Alide2_2587	PF00384	Molybdopterin oxidoreductase
Alide2_2587	PF01568	Molydopterin dinucleotide binding domain
Alide2_2587	PF04324	BFD-like [2Fe-2S] binding domain
Alide2_2587	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
Alide2_2588	PF07690	Major Facilitator Superfamily
Alide2_2589	PF09335	Alide2_2589
Alide2_2590	PF02885	Glycosyl transferase family, helical bundle domain
Alide2_2591	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
Alide2_2592	PF03061	Thioesterase superfamily
Alide2_2593	PF03486	HI0933-like protein
Alide2_2594	PF05940	Alide2_2594
Alide2_2595	PF10006	Alide2_2595
Alide2_2596	PF01883	Domain of unknown function DUF59
Alide2_2597	PF01592	NifU-like N terminal domain
Alide2_2598	PF00266	Aminotransferase class-V
Alide2_2599	PF01458	Uncharacterized protein family (UPF0051)
Alide2_2600	PF00005	ABC transporter
Alide2_2601	PF01458	Uncharacterized protein family (UPF0051)
Alide2_2602	PF01165	Ribosomal protein S21
Alide2_2603	PF09424	Yqey-like protein
Alide2_2604	PF13487	HD domain
Alide2_2605	PF01144	Coenzyme A transferase
Alide2_2606	PF01144	Coenzyme A transferase
Alide2_2607	PF00196	Bacterial regulatory proteins, luxR family
Alide2_2607	PF13426	PAS domain
Alide2_2608	PF01757	Alide2_2608
Alide2_2609	PF00583	Acetyltransferase (GNAT) family
Alide2_2609	PF00696	Amino acid kinase family
Alide2_2610	PF01042	Endoribonuclease L-PSP
Alide2_2611	PF01266	FAD dependent oxidoreductase
Alide2_2612	PF01177	Asp/Glu/Hydantoin racemase
Alide2_2613	PF13458	Periplasmic binding protein
Alide2_2614	PF02653	Alide2_2614
Alide2_2615	PF02653	Alide2_2615
Alide2_2616	PF00005	ABC transporter
Alide2_2617	PF00005	ABC transporter
Alide2_2618	PF13458	Periplasmic binding protein
Alide2_2619	PF00701	Dihydrodipicolinate synthetase family
Alide2_2620	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
Alide2_2620	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Alide2_2621	PF00392	Bacterial regulatory proteins, gntR family
Alide2_2621	PF07729	FCD domain
Alide2_2622	PF01590	GAF domain
Alide2_2622	PF01966	HD domain
Alide2_2622	PF13487	HD domain
Alide2_2623	PF02600	Disulfide bond formation protein DsbB
Alide2_2624	PF00005	ABC transporter
Alide2_2624	PF12857	Alide2_2624
Alide2_2625	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_2626	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_2627	PF13531	Bacterial extracellular solute-binding protein
Alide2_2628	PF06821	Serine hydrolase
Alide2_2629	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2629	PF03466	LysR substrate binding domain
Alide2_2630	PF02525	Flavodoxin-like fold
Alide2_2631	PF03358	NADPH-dependent FMN reductase
Alide2_2632	PF03180	NLPA lipoprotein
Alide2_2633	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_2634	PF00005	ABC transporter
Alide2_2634	PF09383	NIL domain
Alide2_2635	PF01124	MAPEG family
Alide2_2636	PF02132	RecR protein
Alide2_2636	PF13662	Toprim domain
Alide2_2637	PF02575	YbaB/EbfC DNA-binding family
Alide2_2638	PF12169	DNA polymerase III subunits gamma and tau domain III
Alide2_2638	PF12170	DNA polymerase III tau subunit V interacting with alpha
Alide2_2638	PF13177	DNA polymerase III, delta subunit
Alide2_2639	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2639	PF03459	TOBE domain
Alide2_2640	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
Alide2_2640	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
Alide2_2641	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_2642	PF13531	Bacterial extracellular solute-binding protein
Alide2_2643	PF04016	Domain of unknown function (DUF364)
Alide2_2643	PF13938	Domain of unknown function (DUF4213)
Alide2_2644	PF13649	Methyltransferase domain
Alide2_2645	PF00005	ABC transporter
Alide2_2646	PF01032	FecCD transport family
Alide2_2647	PF01497	Periplasmic binding protein
Alide2_2648	PF10649	Alide2_2648
Alide2_2649	PF00593	TonB dependent receptor
Alide2_2649	PF07715	TonB-dependent Receptor Plug Domain
Alide2_2651	PF03486	HI0933-like protein
Alide2_2652	PF02678	Pirin
Alide2_2652	PF05726	Pirin C-terminal cupin domain
Alide2_2653	PF02678	Pirin
Alide2_2653	PF05726	Pirin C-terminal cupin domain
Alide2_2654	PF00580	UvrD/REP helicase N-terminal domain
Alide2_2654	PF12705	PD-(D/E)XK nuclease superfamily
Alide2_2654	PF13361	UvrD-like helicase C-terminal domain
Alide2_2655	PF12705	PD-(D/E)XK nuclease superfamily
Alide2_2656	PF00085	Thioredoxin
Alide2_2657	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
Alide2_2657	PF07497	Rho termination factor, RNA-binding domain
Alide2_2657	PF07498	Rho termination factor, N-terminal domain
Alide2_2658	PF01197	Ribosomal protein L31
Alide2_2660	PF01554	MatE
Alide2_2661	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_2661	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_2661	PF11808	Alide2_2661
Alide2_2661	PF13188	PAS domain
Alide2_2662	PF00072	Response regulator receiver domain
Alide2_2662	PF00486	Transcriptional regulatory protein, C terminal
Alide2_2663	PF01895	PhoU domain
Alide2_2664	PF00005	ABC transporter
Alide2_2665	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_2666	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_2667	PF12849	PBP superfamily domain
Alide2_2668	PF02541	Ppx/GppA phosphatase family
Alide2_2669	PF00300	Histidine phosphatase superfamily (branch 1)
Alide2_2670	PF02503	Polyphosphate kinase middle domain
Alide2_2670	PF13089	Polyphosphate kinase N-terminal domain
Alide2_2670	PF13090	Polyphosphate kinase C-terminal domain
Alide2_2671	PF13444	Acetyltransferase (GNAT) domain
Alide2_2672	PF00563	EAL domain
Alide2_2672	PF00990	GGDEF domain
Alide2_2672	PF13426	PAS domain
Alide2_2673	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
Alide2_2673	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
Alide2_2673	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
Alide2_2673	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
Alide2_2674	PF00809	Pterin binding enzyme
Alide2_2675	PF00004	ATPase family associated with various cellular activities (AAA)
Alide2_2675	PF01434	Peptidase family M41
Alide2_2675	PF06480	FtsH Extracellular
Alide2_2676	PF01728	FtsJ-like methyltransferase
Alide2_2677	PF01985	CRS1 / YhbY (CRM) domain
Alide2_2679	PF13664	Alide2_2679
Alide2_2680	PF01272	Transcription elongation factor, GreA/GreB, C-term
Alide2_2680	PF03449	Transcription elongation factor, N-terminal
Alide2_2681	PF02142	MGS-like domain
Alide2_2681	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
Alide2_2681	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
Alide2_2682	PF00117	Glutamine amidotransferase class-I
Alide2_2682	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
Alide2_2683	PF00589	Phage integrase family
Alide2_2684	PF12728	Helix-turn-helix domain
Alide2_2685	PF01527	Transposase
Alide2_2688	PF00589	Phage integrase family
Alide2_2688	PF13356	Domain of unknown function (DUF4102)
Alide2_2690	PF08443	RimK-like ATP-grasp domain
Alide2_2693	PF04471	Restriction endonuclease
Alide2_2695	PF05930	Prophage CP4-57 regulatory protein (AlpA)
Alide2_2696	PF13245	Part of AAA domain
Alide2_2697	PF13175	AAA ATPase domain
Alide2_2698	PF00216	Bacterial DNA-binding protein
Alide2_2700	PF01527	Transposase
Alide2_2701	PF13276	Alide2_2701
Alide2_2701	PF13683	Alide2_2701
Alide2_2703	PF13649	Methyltransferase domain
Alide2_2705	PF11604	Copper binding periplasmic protein CusF
Alide2_2706	PF00127	Copper binding proteins, plastocyanin/azurin family
Alide2_2707	PF07731	Multicopper oxidase
Alide2_2707	PF07732	Multicopper oxidase
Alide2_2708	PF02321	Outer membrane efflux protein
Alide2_2711	PF02049	Alide2_2711
Alide2_2712	PF00871	Acetokinase family
Alide2_2713	PF13411	MerR HTH family regulatory protein
Alide2_2714	PF02353	Mycolic acid cyclopropane synthetase
Alide2_2716	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
Alide2_2716	PF09364	XFP N-terminal domain
Alide2_2718	PF01113	Dihydrodipicolinate reductase, N-terminus
Alide2_2718	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Alide2_2719	PF03109	Alide2_2719
Alide2_2720	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
Alide2_2720	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Alide2_2721	PF13649	Methyltransferase domain
Alide2_2723	PF09335	Alide2_2723
Alide2_2724	PF13180	PDZ domain
Alide2_2724	PF13365	Trypsin-like peptidase domain
Alide2_2725	PF00156	Phosphoribosyl transferase domain
Alide2_2725	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
Alide2_2726	PF00591	Glycosyl transferase family, a/b domain
Alide2_2726	PF02885	Glycosyl transferase family, helical bundle domain
Alide2_2726	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
Alide2_2727	PF00753	Metallo-beta-lactamase superfamily
Alide2_2727	PF07521	RNA-metabolising metallo-beta-lactamase
Alide2_2727	PF10996	Beta-Casp domain
Alide2_2728	PF04536	TLP18
Alide2_2729	PF04536	TLP18
Alide2_2730	PF04011	LemA family
Alide2_2731	PF07690	Major Facilitator Superfamily
Alide2_2732	PF00122	E1-E2 ATPase
Alide2_2732	PF00403	Heavy-metal-associated domain
Alide2_2732	PF00702	haloacid dehalogenase-like hydrolase
Alide2_2733	PF03976	Polyphosphate kinase 2 (PPK2)
Alide2_2735	PF00376	MerR family regulatory protein
Alide2_2735	PF09278	MerR, DNA binding
Alide2_2736	PF13663	Alide2_2736
Alide2_2739	PF00873	AcrB/AcrD/AcrF family
Alide2_2740	PF11604	Copper binding periplasmic protein CusF
Alide2_2740	PF16576	Alide2_2740
Alide2_2741	PF02321	Outer membrane efflux protein
Alide2_2742	PF10982	Protein of unknown function (DUF2789)
Alide2_2743	PF02308	Alide2_2743
Alide2_2743	PF13194	Alide2_2743
Alide2_2745	PF02239	Cytochrome D1 heme domain
Alide2_2746	PF11339	Alide2_2746
Alide2_2747	PF00122	E1-E2 ATPase
Alide2_2747	PF00702	haloacid dehalogenase-like hydrolase
Alide2_2747	PF04945	YHS domain
Alide2_2748	PF11666	Alide2_2748
Alide2_2749	PF00403	Heavy-metal-associated domain
Alide2_2750	PF04191	Phospholipid methyltransferase
Alide2_2751	PF11666	Alide2_2751
Alide2_2753	PF11604	Copper binding periplasmic protein CusF
Alide2_2754	PF00072	Response regulator receiver domain
Alide2_2754	PF00486	Transcriptional regulatory protein, C terminal
Alide2_2755	PF00665	Integrase core domain
Alide2_2755	PF13276	Alide2_2755
Alide2_2756	PF01527	Transposase
Alide2_2759	PF08937	MTH538 TIR-like domain (DUF1863)
Alide2_2761	PF03061	Thioesterase superfamily
Alide2_2762	PF12705	PD-(D/E)XK nuclease superfamily
Alide2_2766	PF12834	Alide2_2766
Alide2_2766	PF12835	Integrase
Alide2_2767	PF00816	H-NS histone family
Alide2_2770	PF09436	Alide2_2770
Alide2_2770	PF14464	Prokaryotic homologs of the JAB domain
Alide2_2771	PF14460	Alide2_2771
Alide2_2773	PF13358	DDE superfamily endonuclease
Alide2_2773	PF13565	Alide2_2773
Alide2_2775	PF14454	Alide2_2775
Alide2_2777	PF02195	ParB-like nuclease domain
Alide2_2778	PF02384	N-6 DNA Methylase
Alide2_2780	PF04851	Type III restriction enzyme, res subunit
Alide2_2780	PF13307	Helicase C-terminal domain
Alide2_2782	PF05717	Alide2_2782
Alide2_2783	PF01527	Transposase
Alide2_2788	PF08273	Zinc-binding domain of primase-helicase
Alide2_2788	PF13362	Toprim domain
Alide2_2789	PF06067	Alide2_2789
Alide2_2790	PF00717	Peptidase S24-like
Alide2_2792	PF05280	Flagellar transcriptional activator (FlhC)
Alide2_2793	PF07514	Putative helicase
Alide2_2794	PF12696	TraM recognition site of TraD and TraG
Alide2_2795	PF14348	Alide2_2795
Alide2_2796	PF13560	Helix-turn-helix domain
Alide2_2799	PF01464	Transglycosylase SLT domain
Alide2_2800	PF00691	OmpA family
Alide2_2802	PF07178	Alide2_2802
Alide2_2803	PF05309	Alide2_2803
Alide2_2804	PF06586	Alide2_2804
Alide2_2805	PF03743	Bacterial conjugation TrbI-like protein
Alide2_2806	PF10411	Disulfide bond isomerase protein N-terminus
Alide2_2806	PF13098	Thioredoxin-like domain
Alide2_2807	PF09676	Alide2_2807
Alide2_2808	PF11130	Alide2_2808
Alide2_2810	PF10502	Signal peptidase, peptidase S26
Alide2_2812	PF12477	Alide2_2812
Alide2_2813	PF06834	Alide2_2813
Alide2_2814	PF09673	Alide2_2814
Alide2_2815	PF06986	Alide2_2815
Alide2_2817	PF13728	F plasmid transfer operon protein
Alide2_2818	PF06122	Alide2_2818
Alide2_2819	PF07916	Alide2_2819
Alide2_2822	PF00089	Trypsin
Alide2_2823	PF13411	MerR HTH family regulatory protein
Alide2_2824	PF00216	Bacterial DNA-binding protein
Alide2_2825	PF01588	Putative tRNA binding domain
Alide2_2825	PF03147	Ferredoxin-fold anticodon binding domain
Alide2_2825	PF03483	B3/4 domain
Alide2_2825	PF03484	tRNA synthetase B5 domain
Alide2_2826	PF01409	tRNA synthetases class II core domain (F)
Alide2_2826	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
Alide2_2827	PF00453	Ribosomal protein L20
Alide2_2828	PF01632	Ribosomal protein L35
Alide2_2829	PF00707	Translation initiation factor IF-3, C-terminal domain
Alide2_2829	PF05198	Translation initiation factor IF-3, N-terminal domain
Alide2_2830	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
Alide2_2830	PF02824	TGS domain
Alide2_2830	PF03129	Anticodon binding domain
Alide2_2830	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
Alide2_2831	PF01272	Transcription elongation factor, GreA/GreB, C-term
Alide2_2831	PF13302	Acetyltransferase (GNAT) domain
Alide2_2831	PF14760	Rnk N-terminus
Alide2_2832	PF00463	Isocitrate lyase family
Alide2_2833	PF00892	EamA-like transporter family
Alide2_2834	PF02201	SWIB/MDM2 domain
Alide2_2835	PF04324	BFD-like [2Fe-2S] binding domain
Alide2_2836	PF03544	Gram-negative bacterial TonB protein C-terminal
Alide2_2837	PF01618	Alide2_2837
Alide2_2838	PF02472	Biopolymer transport protein ExbD/TolR
Alide2_2839	PF10636	Hemin uptake protein hemP
Alide2_2840	PF03928	Domain of unknown function (DUF336)
Alide2_2841	PF01027	Inhibitor of apoptosis-promoting Bax1
Alide2_2842	PF01047	MarR family
Alide2_2843	PF07690	Major Facilitator Superfamily
Alide2_2845	PF00893	Small Multidrug Resistance protein
Alide2_2846	PF02417	Alide2_2846
Alide2_2847	PF02417	Alide2_2847
Alide2_2848	PF02146	Sir2 family
Alide2_2849	PF00440	Bacterial regulatory proteins, tetR family
Alide2_2849	PF13305	WHG domain
Alide2_2850	PF07237	Protein of unknown function (DUF1428)
Alide2_2851	PF04828	Glutathione-dependent formaldehyde-activating enzyme
Alide2_2852	PF06983	3-demethylubiquinone-9 3-methyltransferase
Alide2_2853	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
Alide2_2854	PF06983	3-demethylubiquinone-9 3-methyltransferase
Alide2_2856	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
Alide2_2857	PF00588	SpoU rRNA Methylase family
Alide2_2857	PF08032	RNA 2'-O ribose methyltransferase substrate binding
Alide2_2858	PF00375	Sodium:dicarboxylate symporter family
Alide2_2859	PF00005	ABC transporter
Alide2_2860	PF13472	GDSL-like Lipase/Acylhydrolase family
Alide2_2861	PF09955	Alide2_2861
Alide2_2862	PF01053	Cys/Met metabolism PLP-dependent enzyme
Alide2_2863	PF04972	BON domain
Alide2_2864	PF00916	Alide2_2864
Alide2_2864	PF01740	STAS domain
Alide2_2865	PF00990	GGDEF domain
Alide2_2866	PF13614	AAA domain
Alide2_2867	PF00501	AMP-binding enzyme
Alide2_2867	PF13193	AMP-binding enzyme C-terminal domain
Alide2_2867	PF16177	Alide2_2867
Alide2_2868	PF00857	Isochorismatase family
Alide2_2869	PF07995	Glucose / Sorbosone dehydrogenase
Alide2_2870	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2870	PF03466	LysR substrate binding domain
Alide2_2871	PF00171	Aldehyde dehydrogenase family
Alide2_2872	PF07007	Protein of unknown function (DUF1311)
Alide2_2873	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_2873	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_2873	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_2874	PF04993	TfoX N-terminal domain
Alide2_2875	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
Alide2_2875	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
Alide2_2876	PF05050	Methyltransferase FkbM domain
Alide2_2879	PF00291	Pyridoxal-phosphate dependent enzyme
Alide2_2880	PF04320	Alide2_2880
Alide2_2881	PF04295	Alide2_2881
Alide2_2881	PF08666	SAF domain
Alide2_2882	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2883	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
Alide2_2883	PF13378	Enolase C-terminal domain-like
Alide2_2884	PF00392	Bacterial regulatory proteins, gntR family
Alide2_2884	PF07729	FCD domain
Alide2_2885	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2886	PF00701	Dihydrodipicolinate synthetase family
Alide2_2887	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2888	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
Alide2_2888	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Alide2_2889	PF13378	Enolase C-terminal domain-like
Alide2_2890	PF00171	Aldehyde dehydrogenase family
Alide2_2891	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
Alide2_2892	PF04376	Alide2_2892
Alide2_2892	PF04377	Alide2_2892
Alide2_2893	PF02678	Pirin
Alide2_2894	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2894	PF03466	LysR substrate binding domain
Alide2_2895	PF01593	Flavin containing amine oxidoreductase
Alide2_2895	PF13450	NAD(P)-binding Rossmann-like domain
Alide2_2896	PF00749	tRNA synthetases class I (E and Q), catalytic domain
Alide2_2897	PF02390	Putative methyltransferase
Alide2_2898	PF00990	GGDEF domain
Alide2_2899	PF01411	tRNA synthetases class II (A)
Alide2_2899	PF02272	DHHA1 domain
Alide2_2899	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
Alide2_2900	PF00701	Dihydrodipicolinate synthetase family
Alide2_2901	PF04290	Alide2_2901
Alide2_2902	PF06808	Alide2_2902
Alide2_2903	PF03480	Bacterial extracellular solute-binding protein, family 7
Alide2_2904	PF02615	Malate/L-lactate dehydrogenase
Alide2_2905	PF00392	Bacterial regulatory proteins, gntR family
Alide2_2905	PF07729	FCD domain
Alide2_2906	PF00849	RNA pseudouridylate synthase
Alide2_2907	PF00583	Acetyltransferase (GNAT) family
Alide2_2907	PF13549	ATP-grasp domain
Alide2_2907	PF13607	Succinyl-CoA ligase like flavodoxin domain
Alide2_2908	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
Alide2_2909	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
Alide2_2909	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
Alide2_2909	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
Alide2_2909	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
Alide2_2910	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2911	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_2912	PF04962	KduI/IolB family
Alide2_2913	PF00294	pfkB family carbohydrate kinase
Alide2_2913	PF09863	Uncharacterized protein conserved in bacteria (DUF2090)
Alide2_2914	PF01380	SIS domain
Alide2_2914	PF01418	Helix-turn-helix domain, rpiR family
Alide2_2915	PF00730	HhH-GPD superfamily base excision DNA repair protein
Alide2_2915	PF02805	Metal binding domain of Ada
Alide2_2915	PF06029	AlkA N-terminal domain
Alide2_2915	PF12833	Helix-turn-helix domain
Alide2_2916	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
Alide2_2917	PF00892	EamA-like transporter family
Alide2_2918	PF00211	Adenylate and Guanylate cyclase catalytic domain
Alide2_2918	PF00498	FHA domain
Alide2_2919	PF02016	LD-carboxypeptidase
Alide2_2920	PF00561	alpha/beta hydrolase fold
Alide2_2920	PF14437	Alide2_2920
Alide2_2921	PF04299	Putative FMN-binding domain
Alide2_2922	PF01136	Alide2_2922
Alide2_2922	PF12392	Alide2_2922
Alide2_2923	PF01053	Cys/Met metabolism PLP-dependent enzyme
Alide2_2924	PF03781	Sulfatase-modifying factor enzyme 1
Alide2_2924	PF12867	DinB superfamily
Alide2_2925	PF10017	Alide2_2925
Alide2_2926	PF03922	OmpW family
Alide2_2927	PF05661	Alide2_2927
Alide2_2928	PF02769	AIR synthase related protein, C-terminal domain
Alide2_2928	PF13507	CobB/CobQ-like glutamine amidotransferase domain
Alide2_2929	PF00557	Metallopeptidase family M24
Alide2_2930	PF01966	HD domain
Alide2_2930	PF08335	GlnD PII-uridylyltransferase
Alide2_2931	PF00860	Permease family
Alide2_2932	PF01327	Polypeptide deformylase
Alide2_2933	PF04304	Alide2_2933
Alide2_2935	PF11903	Alide2_2935
Alide2_2936	PF13671	AAA domain
Alide2_2937	PF00180	Isocitrate/isopropylmalate dehydrogenase
Alide2_2938	PF02643	Uncharacterized ACR, COG1430
Alide2_2939	PF03971	Monomeric isocitrate dehydrogenase
Alide2_2940	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
Alide2_2940	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
Alide2_2941	PF02601	Alide2_2941
Alide2_2941	PF13742	Alide2_2941
Alide2_2942	PF01618	Alide2_2942
Alide2_2943	PF02472	Biopolymer transport protein ExbD/TolR
Alide2_2944	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
Alide2_2945	PF03966	Trm112p-like protein
Alide2_2946	PF02348	Cytidylyltransferase
Alide2_2947	PF00406	Adenylate kinase
Alide2_2947	PF05191	Adenylate kinase, active site lid
Alide2_2948	PF00710	Asparaginase
Alide2_2949	PF00717	Peptidase S24-like
Alide2_2949	PF01726	LexA DNA binding domain
Alide2_2951	PF00270	DEAD/DEAH box helicase
Alide2_2951	PF00271	Helicase conserved C-terminal domain
Alide2_2951	PF04408	Helicase associated domain (HA2)
Alide2_2951	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
Alide2_2951	PF11898	Alide2_2951
Alide2_2952	PF00108	Thiolase, N-terminal domain
Alide2_2952	PF02803	Thiolase, C-terminal domain
Alide2_2953	PF00501	AMP-binding enzyme
Alide2_2953	PF13193	AMP-binding enzyme C-terminal domain
Alide2_2954	PF02632	BioY family
Alide2_2955	PF02361	Cobalt transport protein
Alide2_2956	PF00005	ABC transporter
Alide2_2958	PF13441	Alide2_2958
Alide2_2959	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Alide2_2962	PF14464	Prokaryotic homologs of the JAB domain
Alide2_2963	PF01695	IstB-like ATP binding protein
Alide2_2964	PF00665	Integrase core domain
Alide2_2965	PF05284	Alide2_2965
Alide2_2966	PF01381	Helix-turn-helix
Alide2_2967	PF11171	Alide2_2967
Alide2_2968	PF10074	Alide2_2968
Alide2_2969	PF12728	Helix-turn-helix domain
Alide2_2970	PF10134	Alide2_2970
Alide2_2971	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
Alide2_2973	PF11000	Alide2_2973
Alide2_2974	PF10502	Signal peptidase, peptidase S26
Alide2_2975	PF11843	Alide2_2975
Alide2_2976	PF00762	Ferrochelatase
Alide2_2977	PF01872	RibD C-terminal domain
Alide2_2978	PF10070	Alide2_2978
Alide2_2979	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
Alide2_2980	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2980	PF03466	LysR substrate binding domain
Alide2_2981	PF03741	Alide2_2981
Alide2_2982	PF05099	Tellurite resistance protein TerB
Alide2_2983	PF13453	Alide2_2983
Alide2_2984	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_2984	PF03466	LysR substrate binding domain
Alide2_2985	PF00255	Glutathione peroxidase
Alide2_2986	PF01370	NAD dependent epimerase/dehydratase family
Alide2_2986	PF08338	Domain of unknown function (DUF1731)
Alide2_2987	PF00106	short chain dehydrogenase
Alide2_2988	PF04244	Deoxyribodipyrimidine photo-lyase-related protein
Alide2_2989	PF02469	Fasciclin domain
Alide2_2990	PF00875	DNA photolyase
Alide2_2990	PF03441	FAD binding domain of DNA photolyase
Alide2_2991	PF08212	Lipocalin-like domain
Alide2_2992	PF02310	B12 binding domain
Alide2_2992	PF13411	MerR HTH family regulatory protein
Alide2_2993	PF01593	Flavin containing amine oxidoreductase
Alide2_2994	PF07103	Alide2_2994
Alide2_2995	PF02353	Mycolic acid cyclopropane synthetase
Alide2_2996	PF16036	Alide2_2996
Alide2_2997	PF13347	MFS/sugar transport protein
Alide2_2998	PF12915	Alide2_2998
Alide2_2999	PF00106	short chain dehydrogenase
Alide2_3000	PF12680	SnoaL-like domain
Alide2_3001	PF00043	Glutathione S-transferase, C-terminal domain
Alide2_3001	PF02798	Glutathione S-transferase, N-terminal domain
Alide2_3002	PF00875	DNA photolyase
Alide2_3002	PF03441	FAD binding domain of DNA photolyase
Alide2_3003	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3003	PF03466	LysR substrate binding domain
Alide2_3004	PF00665	Integrase core domain
Alide2_3005	PF01695	IstB-like ATP binding protein
Alide2_3006	PF06250	Alide2_3006
Alide2_3007	PF00589	Phage integrase family
Alide2_3007	PF13356	Domain of unknown function (DUF4102)
Alide2_3007	PF14659	Phage integrase, N-terminal SAM-like domain
Alide2_3008	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3008	PF03466	LysR substrate binding domain
Alide2_3009	PF01081	KDPG and KHG aldolase
Alide2_3010	PF00920	Dehydratase family
Alide2_3011	PF03480	Bacterial extracellular solute-binding protein, family 7
Alide2_3012	PF06808	Alide2_3012
Alide2_3013	PF04290	Alide2_3013
Alide2_3014	PF01202	Shikimate kinase
Alide2_3015	PF00356	Bacterial regulatory proteins, lacI family
Alide2_3015	PF13377	Periplasmic binding protein-like domain
Alide2_3016	PF00004	ATPase family associated with various cellular activities (AAA)
Alide2_3016	PF02861	Clp amino terminal domain
Alide2_3016	PF07724	AAA domain (Cdc48 subfamily)
Alide2_3016	PF10431	C-terminal, D2-small domain, of ClpB protein
Alide2_3017	PF02617	ATP-dependent Clp protease adaptor protein ClpS
Alide2_3018	PF02811	PHP domain
Alide2_3018	PF07733	Bacterial DNA polymerase III alpha subunit
Alide2_3018	PF14579	Helix-hairpin-helix motif
Alide2_3019	PF13525	Outer membrane lipoprotein
Alide2_3020	PF06733	DEAD_2
Alide2_3020	PF13307	Helicase C-terminal domain
Alide2_3021	PF13672	Protein phosphatase 2C
Alide2_3023	PF03969	AFG1-like ATPase
Alide2_3024	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Alide2_3024	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_3025	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Alide2_3025	PF00364	Biotin-requiring enzyme
Alide2_3025	PF02817	e3 binding domain
Alide2_3026	PF00676	Dehydrogenase E1 component
Alide2_3026	PF02779	Transketolase, pyrimidine binding domain
Alide2_3026	PF16078	Alide2_3026
Alide2_3026	PF16870	Alide2_3026
Alide2_3027	PF01594	Alide2_3027
Alide2_3028	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3030	PF07287	Alide2_3030
Alide2_3031	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3031	PF03466	LysR substrate binding domain
Alide2_3032	PF00582	Universal stress protein family
Alide2_3033	PF00005	ABC transporter
Alide2_3033	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
Alide2_3034	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3034	PF12911	Alide2_3034
Alide2_3035	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3036	PF04191	Phospholipid methyltransferase
Alide2_3037	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
Alide2_3038	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_3039	PF00892	EamA-like transporter family
Alide2_3040	PF04325	Protein of unknown function (DUF465)
Alide2_3041	PF14743	DNA ligase OB-like domain
Alide2_3042	PF03741	Alide2_3042
Alide2_3043	PF01276	Orn/Lys/Arg decarboxylase, major domain
Alide2_3043	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
Alide2_3043	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
Alide2_3045	PF01145	SPFH domain / Band 7 family
Alide2_3045	PF16200	Alide2_3045
Alide2_3046	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3046	PF03466	LysR substrate binding domain
Alide2_3047	PF00205	Thiamine pyrophosphate enzyme, central domain
Alide2_3047	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Alide2_3047	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Alide2_3052	PF00665	Integrase core domain
Alide2_3052	PF13276	Alide2_3052
Alide2_3053	PF01527	Transposase
Alide2_3054	PF14281	Alide2_3054
Alide2_3055	PF01609	Transposase DDE domain
Alide2_3055	PF13340	Alide2_3055
Alide2_3056	PF01223	DNA/RNA non-specific endonuclease
Alide2_3057	PF03050	Alide2_3057
Alide2_3057	PF13005	Alide2_3057
Alide2_3057	PF13007	Alide2_3057
Alide2_3057	PF13817	Alide2_3057
Alide2_3058	PF05717	Alide2_3058
Alide2_3059	PF01527	Transposase
Alide2_3061	PF06067	Alide2_3061
Alide2_3062	PF09588	YqaJ-like viral recombinase domain
Alide2_3066	PF09851	Alide2_3066
Alide2_3067	PF01381	Helix-turn-helix
Alide2_3069	PF00136	DNA polymerase family B
Alide2_3069	PF03104	DNA polymerase family B, exonuclease domain
Alide2_3070	PF11726	Alide2_3070
Alide2_3071	PF05930	Prophage CP4-57 regulatory protein (AlpA)
Alide2_3073	PF00589	Phage integrase family
Alide2_3073	PF13356	Domain of unknown function (DUF4102)
Alide2_3074	PF01464	Transglycosylase SLT domain
Alide2_3074	PF08238	Sel1 repeat
Alide2_3079	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_3080	PF00501	AMP-binding enzyme
Alide2_3080	PF13193	AMP-binding enzyme C-terminal domain
Alide2_3081	PF02627	Carboxymuconolactone decarboxylase family
Alide2_3082	PF00005	ABC transporter
Alide2_3083	PF00005	ABC transporter
Alide2_3083	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_3084	PF02653	Alide2_3084
Alide2_3085	PF02653	Alide2_3085
Alide2_3086	PF13458	Periplasmic binding protein
Alide2_3087	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_3088	PF00108	Thiolase, N-terminal domain
Alide2_3088	PF02803	Thiolase, C-terminal domain
Alide2_3089	PF00501	AMP-binding enzyme
Alide2_3089	PF13193	AMP-binding enzyme C-terminal domain
Alide2_3092	PF13531	Bacterial extracellular solute-binding protein
Alide2_3093	PF04362	Bacterial Fe(2+) trafficking
Alide2_3094	PF03458	Alide2_3094
Alide2_3095	PF01266	FAD dependent oxidoreductase
Alide2_3095	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
Alide2_3096	PF01925	Alide2_3096
Alide2_3097	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
Alide2_3097	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
Alide2_3098	PF06073	Alide2_3098
Alide2_3099	PF01507	Phosphoadenosine phosphosulfate reductase family
Alide2_3100	PF01507	Phosphoadenosine phosphosulfate reductase family
Alide2_3101	PF00009	Elongation factor Tu GTP binding domain
Alide2_3102	PF00037	4Fe-4S binding domain
Alide2_3102	PF11953	Domain of unknown function (DUF3470)
Alide2_3103	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_3104	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
Alide2_3105	PF06347	Bacterial SH3 domain
Alide2_3105	PF08239	Bacterial SH3 domain
Alide2_3106	PF08543	Phosphomethylpyrimidine kinase
Alide2_3107	PF01266	FAD dependent oxidoreductase
Alide2_3108	PF02597	ThiS family
Alide2_3109	PF05690	Thiazole biosynthesis protein ThiG
Alide2_3110	PF02581	Thiamine monophosphate synthase/TENI
Alide2_3112	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
Alide2_3112	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Alide2_3113	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_3114	PF00027	Cyclic nucleotide-binding domain
Alide2_3114	PF13545	Crp-like helix-turn-helix domain
Alide2_3115	PF01636	Phosphotransferase enzyme family
Alide2_3116	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_3116	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_3116	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_3117	PF00171	Aldehyde dehydrogenase family
Alide2_3117	PF01619	Proline dehydrogenase
Alide2_3117	PF14850	DNA-binding domain of Proline dehydrogenase
Alide2_3118	PF00474	Sodium:solute symporter family
Alide2_3119	PF01614	Bacterial transcriptional regulator
Alide2_3119	PF09339	IclR helix-turn-helix domain
Alide2_3120	PF00768	D-alanyl-D-alanine carboxypeptidase
Alide2_3121	PF00682	HMGL-like
Alide2_3121	PF08502	LeuA allosteric (dimerisation) domain
Alide2_3122	PF00682	HMGL-like
Alide2_3122	PF08502	LeuA allosteric (dimerisation) domain
Alide2_3123	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3123	PF03466	LysR substrate binding domain
Alide2_3124	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Alide2_3125	PF07690	Major Facilitator Superfamily
Alide2_3126	PF01557	Fumarylacetoacetate (FAA) hydrolase family
Alide2_3127	PF13417	Glutathione S-transferase, N-terminal domain
Alide2_3128	PF01066	CDP-alcohol phosphatidyltransferase
Alide2_3129	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
Alide2_3129	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
Alide2_3130	PF10369	Small subunit of acetolactate synthase
Alide2_3130	PF13710	ACT domain
Alide2_3131	PF00205	Thiamine pyrophosphate enzyme, central domain
Alide2_3131	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Alide2_3131	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
Alide2_3132	PF08281	Sigma-70, region 4
Alide2_3133	PF12279	Alide2_3133
Alide2_3134	PF11304	Alide2_3134
Alide2_3135	PF06271	Alide2_3135
Alide2_3136	PF01219	Prokaryotic diacylglycerol kinase
Alide2_3137	PF03641	Possible lysine decarboxylase
Alide2_3138	PF00543	Nitrogen regulatory protein P-II
Alide2_3139	PF00795	Carbon-nitrogen hydrolase
Alide2_3139	PF02540	NAD synthase
Alide2_3141	PF04339	Alide2_3141
Alide2_3142	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
Alide2_3142	PF00672	HAMP domain
Alide2_3142	PF12729	Alide2_3142
Alide2_3143	PF01584	CheW-like domain
Alide2_3144	PF00719	Inorganic pyrophosphatase
Alide2_3145	PF03030	Inorganic H+ pyrophosphatase
Alide2_3146	PF00171	Aldehyde dehydrogenase family
Alide2_3147	PF11136	Alide2_3147
Alide2_3148	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
Alide2_3149	PF04055	Radical SAM superfamily
Alide2_3149	PF06463	Molybdenum Cofactor Synthesis C
Alide2_3149	PF13353	4Fe-4S single cluster domain
Alide2_3150	PF12804	MobA-like NTP transferase domain
Alide2_3151	PF00583	Acetyltransferase (GNAT) family
Alide2_3152	PF00994	Probable molybdopterin binding domain
Alide2_3152	PF03453	MoeA N-terminal region (domain I and II)
Alide2_3152	PF03454	MoeA C-terminal region (domain IV)
Alide2_3153	PF00085	Thioredoxin
Alide2_3155	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3156	PF03737	Demethylmenaquinone methyltransferase
Alide2_3157	PF00497	Bacterial extracellular solute-binding proteins, family 3
Alide2_3158	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3158	PF03466	LysR substrate binding domain
Alide2_3159	PF03737	Demethylmenaquinone methyltransferase
Alide2_3160	PF03737	Demethylmenaquinone methyltransferase
Alide2_3161	PF00155	Aminotransferase class I and II
Alide2_3162	PF00075	RNase H
Alide2_3163	PF08241	Methyltransferase domain
Alide2_3164	PF00753	Metallo-beta-lactamase superfamily
Alide2_3164	PF16123	Alide2_3164
Alide2_3165	PF01464	Transglycosylase SLT domain
Alide2_3165	PF01476	LysM domain
Alide2_3166	PF11295	Alide2_3166
Alide2_3167	PF09084	NMT1/THI5 like
Alide2_3168	PF00589	Phage integrase family
Alide2_3168	PF13356	Domain of unknown function (DUF4102)
Alide2_3169	PF10410	DnaB-helicase binding domain of primase
Alide2_3171	PF14090	Alide2_3171
Alide2_3179	PF00899	ThiF family
Alide2_3180	PF13525	Outer membrane lipoprotein
Alide2_3180	PF16331	Alide2_3180
Alide2_3181	PF00691	OmpA family
Alide2_3182	PF04052	TolB amino-terminal domain
Alide2_3182	PF07676	WD40-like Beta Propeller Repeat
Alide2_3183	PF00005	ABC transporter
Alide2_3183	PF00664	ABC transporter transmembrane region
Alide2_3184	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
Alide2_3184	PF00364	Biotin-requiring enzyme
Alide2_3184	PF02785	Biotin carboxylase C-terminal domain
Alide2_3184	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
Alide2_3185	PF02626	Allophanate hydrolase subunit 2
Alide2_3185	PF02682	Allophanate hydrolase subunit 1
Alide2_3186	PF07286	Protein of unknown function (DUF1445)
Alide2_3187	PF03746	LamB/YcsF family
Alide2_3188	PF07690	Major Facilitator Superfamily
Alide2_3189	PF00392	Bacterial regulatory proteins, gntR family
Alide2_3189	PF07729	FCD domain
Alide2_3190	PF10087	Alide2_3190
Alide2_3192	PF12796	Ankyrin repeats (3 copies)
Alide2_3193	PF01026	TatD related DNase
Alide2_3194	PF07238	PilZ domain
Alide2_3195	PF13177	DNA polymerase III, delta subunit
Alide2_3196	PF02223	Thymidylate kinase
Alide2_3197	PF02618	YceG-like family
Alide2_3198	PF01571	Aminomethyltransferase folate-binding domain
Alide2_3198	PF08669	Glycine cleavage T-protein C-terminal barrel domain
Alide2_3199	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
Alide2_3200	PF07690	Major Facilitator Superfamily
Alide2_3201	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_3201	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_3202	PF00072	Response regulator receiver domain
Alide2_3202	PF00196	Bacterial regulatory proteins, luxR family
Alide2_3203	PF03928	Domain of unknown function (DUF336)
Alide2_3204	PF03061	Thioesterase superfamily
Alide2_3204	PF13673	Acetyltransferase (GNAT) domain
Alide2_3205	PF07859	alpha/beta hydrolase fold
Alide2_3207	PF08668	HDOD domain
Alide2_3208	PF01614	Bacterial transcriptional regulator
Alide2_3208	PF09339	IclR helix-turn-helix domain
Alide2_3209	PF04909	Amidohydrolase
Alide2_3210	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3211	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3212	PF02515	CoA-transferase family III
Alide2_3213	PF00285	Citrate synthase
Alide2_3214	PF00356	Bacterial regulatory proteins, lacI family
Alide2_3214	PF13377	Periplasmic binding protein-like domain
Alide2_3215	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3216	PF00501	AMP-binding enzyme
Alide2_3216	PF13193	AMP-binding enzyme C-terminal domain
Alide2_3217	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_3218	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3220	PF01796	Alide2_3220
Alide2_3220	PF12172	Rubredoxin-like zinc ribbon domain (DUF35_N)
Alide2_3221	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3222	PF00575	S1 RNA binding domain
Alide2_3222	PF09371	Tex-like protein N-terminal domain
Alide2_3222	PF12836	Helix-hairpin-helix motif
Alide2_3222	PF16921	Alide2_3222
Alide2_3224	PF01904	Protein of unknown function DUF72
Alide2_3225	PF00691	OmpA family
Alide2_3226	PF04752	Alide2_3226
Alide2_3227	PF01243	Pyridoxamine 5'-phosphate oxidase
Alide2_3227	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
Alide2_3228	PF03547	Alide2_3228
Alide2_3229	PF02417	Alide2_3229
Alide2_3231	PF00593	TonB dependent receptor
Alide2_3231	PF07715	TonB-dependent Receptor Plug Domain
Alide2_3232	PF01625	Peptide methionine sulfoxide reductase
Alide2_3233	PF00440	Bacterial regulatory proteins, tetR family
Alide2_3233	PF16859	Alide2_3233
Alide2_3234	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Alide2_3235	PF00581	Rhodanese-like domain
Alide2_3236	PF02321	Outer membrane efflux protein
Alide2_3237	PF01076	Plasmid recombination enzyme
Alide2_3238	PF00589	Phage integrase family
Alide2_3239	PF00892	EamA-like transporter family
Alide2_3240	PF03358	NADPH-dependent FMN reductase
Alide2_3241	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_3241	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_3241	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_3241	PF12418	Alide2_3241
Alide2_3241	PF12806	Alide2_3241
Alide2_3242	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3243	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3244	PF00497	Bacterial extracellular solute-binding proteins, family 3
Alide2_3245	PF00108	Thiolase, N-terminal domain
Alide2_3245	PF02803	Thiolase, C-terminal domain
Alide2_3246	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_3246	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
Alide2_3246	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Alide2_3247	PF00005	ABC transporter
Alide2_3248	PF00005	ABC transporter
Alide2_3248	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_3249	PF02653	Alide2_3249
Alide2_3250	PF02653	Alide2_3250
Alide2_3251	PF13458	Periplasmic binding protein
Alide2_3252	PF00501	AMP-binding enzyme
Alide2_3252	PF13193	AMP-binding enzyme C-terminal domain
Alide2_3253	PF02696	Alide2_3253
Alide2_3254	PF01641	SelR domain
Alide2_3255	PF04279	Alide2_3255
Alide2_3256	PF01722	BolA-like protein
Alide2_3257	PF13616	PPIC-type PPIASE domain
Alide2_3258	PF06305	Alide2_3258
Alide2_3259	PF13432	Tetratricopeptide repeat
Alide2_3259	PF14559	Tetratricopeptide repeat
Alide2_3260	PF12836	Helix-hairpin-helix motif
Alide2_3261	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
Alide2_3261	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
Alide2_3261	PF04039	Alide2_3261
Alide2_3261	PF13244	Alide2_3261
Alide2_3262	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
Alide2_3263	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
Alide2_3264	PF01899	Alide2_3264
Alide2_3265	PF04066	Alide2_3265
Alide2_3266	PF03334	Alide2_3266
Alide2_3268	PF02537	Alide2_3268
Alide2_3269	PF03641	Possible lysine decarboxylase
Alide2_3270	PF07690	Major Facilitator Superfamily
Alide2_3271	PF02646	Alide2_3271
Alide2_3272	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
Alide2_3272	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Alide2_3273	PF16980	Alide2_3273
Alide2_3274	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
Alide2_3275	PF03061	Thioesterase superfamily
Alide2_3276	PF09361	Alide2_3276
Alide2_3277	PF13416	Bacterial extracellular solute-binding protein
Alide2_3278	PF00106	short chain dehydrogenase
Alide2_3279	PF00589	Phage integrase family
Alide2_3279	PF13356	Domain of unknown function (DUF4102)
Alide2_3280	PF12705	PD-(D/E)XK nuclease superfamily
Alide2_3283	PF06406	StbA protein
Alide2_3285	PF12834	Alide2_3285
Alide2_3285	PF12835	Integrase
Alide2_3286	PF00816	H-NS histone family
Alide2_3288	PF00899	ThiF family
Alide2_3289	PF09436	Alide2_3289
Alide2_3289	PF14464	Prokaryotic homologs of the JAB domain
Alide2_3290	PF14460	Alide2_3290
Alide2_3291	PF14456	Alide2_3291
Alide2_3292	PF14454	Alide2_3292
Alide2_3294	PF02195	ParB-like nuclease domain
Alide2_3296	PF00216	Bacterial DNA-binding protein
Alide2_3299	PF13304	AAA domain
Alide2_3302	PF07505	Alide2_3302
Alide2_3303	PF08843	Nucleotidyl transferase of unknown function (DUF1814)
Alide2_3317	PF08843	Nucleotidyl transferase of unknown function (DUF1814)
Alide2_3318	PF12850	Calcineurin-like phosphoesterase superfamily domain
Alide2_3320	PF00589	Phage integrase family
Alide2_3321	PF06666	Alide2_3321
Alide2_3322	PF05930	Prophage CP4-57 regulatory protein (AlpA)
Alide2_3323	PF08900	Alide2_3323
Alide2_3328	PF08273	Zinc-binding domain of primase-helicase
Alide2_3328	PF13362	Toprim domain
Alide2_3329	PF06067	Alide2_3329
Alide2_3330	PF00717	Peptidase S24-like
Alide2_3332	PF05280	Flagellar transcriptional activator (FlhC)
Alide2_3333	PF07514	Putative helicase
Alide2_3334	PF12696	TraM recognition site of TraD and TraG
Alide2_3335	PF14348	Alide2_3335
Alide2_3336	PF13560	Helix-turn-helix domain
Alide2_3339	PF01464	Transglycosylase SLT domain
Alide2_3341	PF07178	Alide2_3341
Alide2_3342	PF05309	Alide2_3342
Alide2_3343	PF06586	Alide2_3343
Alide2_3344	PF03743	Bacterial conjugation TrbI-like protein
Alide2_3345	PF10411	Disulfide bond isomerase protein N-terminus
Alide2_3345	PF13098	Thioredoxin-like domain
Alide2_3346	PF09676	Alide2_3346
Alide2_3347	PF11130	Alide2_3347
Alide2_3349	PF10502	Signal peptidase, peptidase S26
Alide2_3351	PF12477	Alide2_3351
Alide2_3352	PF06834	Alide2_3352
Alide2_3353	PF09673	Alide2_3353
Alide2_3354	PF06986	Alide2_3354
Alide2_3356	PF13728	F plasmid transfer operon protein
Alide2_3357	PF06122	Alide2_3357
Alide2_3358	PF07916	Alide2_3358
Alide2_3360	PF00589	Phage integrase family
Alide2_3361	PF13586	Alide2_3361
Alide2_3362	PF01527	Transposase
Alide2_3365	PF03976	Polyphosphate kinase 2 (PPK2)
Alide2_3366	PF00122	E1-E2 ATPase
Alide2_3366	PF00403	Heavy-metal-associated domain
Alide2_3366	PF00702	haloacid dehalogenase-like hydrolase
Alide2_3367	PF07690	Major Facilitator Superfamily
Alide2_3368	PF04011	LemA family
Alide2_3369	PF04536	TLP18
Alide2_3370	PF04536	TLP18
Alide2_3371	PF00753	Metallo-beta-lactamase superfamily
Alide2_3371	PF07521	RNA-metabolising metallo-beta-lactamase
Alide2_3371	PF10996	Beta-Casp domain
Alide2_3372	PF00591	Glycosyl transferase family, a/b domain
Alide2_3372	PF02885	Glycosyl transferase family, helical bundle domain
Alide2_3372	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
Alide2_3373	PF00156	Phosphoribosyl transferase domain
Alide2_3373	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
Alide2_3374	PF13180	PDZ domain
Alide2_3374	PF13365	Trypsin-like peptidase domain
Alide2_3375	PF00696	Amino acid kinase family
Alide2_3377	PF00403	Heavy-metal-associated domain
Alide2_3377	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Alide2_3377	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_3379	PF00403	Heavy-metal-associated domain
Alide2_3380	PF02411	Alide2_3380
Alide2_3381	PF00376	MerR family regulatory protein
Alide2_3381	PF09278	MerR, DNA binding
Alide2_3384	PF02049	Alide2_3384
Alide2_3387	PF00873	AcrB/AcrD/AcrF family
Alide2_3390	PF01527	Transposase
Alide2_3391	PF00665	Integrase core domain
Alide2_3391	PF13276	Alide2_3391
Alide2_3392	PF13663	Alide2_3392
Alide2_3394	PF00581	Rhodanese-like domain
Alide2_3394	PF12840	Helix-turn-helix domain
Alide2_3395	PF13649	Methyltransferase domain
Alide2_3396	PF02635	DsrE/DsrF-like family
Alide2_3397	PF08241	Methyltransferase domain
Alide2_3399	PF02321	Outer membrane efflux protein
Alide2_3400	PF16576	Alide2_3400
Alide2_3401	PF00543	Nitrogen regulatory protein P-II
Alide2_3402	PF00873	AcrB/AcrD/AcrF family
Alide2_3403	PF00122	E1-E2 ATPase
Alide2_3403	PF00702	haloacid dehalogenase-like hydrolase
Alide2_3404	PF00072	Response regulator receiver domain
Alide2_3404	PF00486	Transcriptional regulatory protein, C terminal
Alide2_3405	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_3405	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_3406	PF00892	EamA-like transporter family
Alide2_3407	PF13663	Alide2_3407
Alide2_3408	PF13663	Alide2_3408
Alide2_3409	PF13358	DDE superfamily endonuclease
Alide2_3409	PF13565	Alide2_3409
Alide2_3411	PF00749	tRNA synthetases class I (E and Q), catalytic domain
Alide2_3412	PF01053	Cys/Met metabolism PLP-dependent enzyme
Alide2_3413	PF00156	Phosphoribosyl transferase domain
Alide2_3413	PF13537	Glutamine amidotransferase domain
Alide2_3414	PF02674	Alide2_3414
Alide2_3415	PF05036	Sporulation related domain
Alide2_3416	PF02875	Mur ligase family, glutamate ligase domain
Alide2_3416	PF08245	Mur ligase middle domain
Alide2_3417	PF03960	ArsC family
Alide2_3418	PF05433	Alide2_3418
Alide2_3419	PF06865	Protein of unknown function (DUF1255)
Alide2_3420	PF00764	Arginosuccinate synthase
Alide2_3421	PF00158	Sigma-54 interaction domain
Alide2_3421	PF01590	GAF domain
Alide2_3421	PF02954	Bacterial regulatory protein, Fis family
Alide2_3422	PF08882	Alide2_3422
Alide2_3423	PF02538	Alide2_3423
Alide2_3424	PF01968	Hydantoinase/oxoprolinase
Alide2_3424	PF05378	Alide2_3424
Alide2_3425	PF06508	Queuosine biosynthesis protein QueC
Alide2_3426	PF02592	Alide2_3426
Alide2_3427	PF03779	Alide2_3427
Alide2_3428	PF01565	FAD binding domain
Alide2_3428	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
Alide2_3429	PF04461	Protein of unknown function (DUF520)
Alide2_3430	PF13975	Alide2_3430
Alide2_3432	PF02660	Alide2_3432
Alide2_3433	PF04073	Aminoacyl-tRNA editing domain
Alide2_3434	PF00248	Aldo/keto reductase family
Alide2_3435	PF00005	ABC transporter
Alide2_3435	PF08402	TOBE domain
Alide2_3436	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3437	PF13343	Bacterial extracellular solute-binding protein
Alide2_3438	PF00561	alpha/beta hydrolase fold
Alide2_3439	PF16654	Alide2_3439
Alide2_3441	PF01433	Peptidase family M1
Alide2_3441	PF11940	Domain of unknown function (DUF3458)
Alide2_3441	PF17432	Alide2_3441
Alide2_3442	PF00316	Fructose-1-6-bisphosphatase
Alide2_3443	PF08401	Alide2_3443
Alide2_3445	PF01381	Helix-turn-helix
Alide2_3448	PF03592	Terminase small subunit
Alide2_3449	PF08708	Primase C terminal 1 (PriCT-1)
Alide2_3449	PF13481	AAA domain
Alide2_3450	PF16793	Alide2_3450
Alide2_3452	PF12728	Helix-turn-helix domain
Alide2_3454	PF00589	Phage integrase family
Alide2_3454	PF13356	Domain of unknown function (DUF4102)
Alide2_3455	PF00588	SpoU rRNA Methylase family
Alide2_3456	PF01351	Ribonuclease HII
Alide2_3457	PF02684	Alide2_3457
Alide2_3458	PF00132	Bacterial transferase hexapeptide (six repeats)
Alide2_3458	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
Alide2_3459	PF07977	FabA-like domain
Alide2_3460	PF00132	Bacterial transferase hexapeptide (six repeats)
Alide2_3460	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
Alide2_3460	PF14602	Hexapeptide repeat of succinyl-transferase
Alide2_3461	PF03938	Outer membrane protein (OmpH-like)
Alide2_3462	PF01103	Surface antigen
Alide2_3462	PF07244	Surface antigen variable number repeat
Alide2_3463	PF02163	Peptidase family M50
Alide2_3464	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
Alide2_3464	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
Alide2_3464	PF13288	DXP reductoisomerase C-terminal domain
Alide2_3465	PF01148	Cytidylyltransferase family
Alide2_3466	PF01255	Putative undecaprenyl diphosphate synthase
Alide2_3467	PF01765	Ribosome recycling factor
Alide2_3468	PF00696	Amino acid kinase family
Alide2_3469	PF00889	Elongation factor TS
Alide2_3470	PF00318	Ribosomal protein S2
Alide2_3471	PF01425	Amidase
Alide2_3472	PF01266	FAD dependent oxidoreductase
Alide2_3474	PF13714	Phosphoenolpyruvate phosphomutase
Alide2_3476	PF02470	Alide2_3476
Alide2_3477	PF02405	Alide2_3477
Alide2_3478	PF13411	MerR HTH family regulatory protein
Alide2_3479	PF00122	E1-E2 ATPase
Alide2_3479	PF00702	haloacid dehalogenase-like hydrolase
Alide2_3480	PF02588	Alide2_3480
Alide2_3482	PF00127	Copper binding proteins, plastocyanin/azurin family
Alide2_3483	PF04214	Alide2_3483
Alide2_3484	PF03576	Peptidase family S58
Alide2_3485	PF16868	Alide2_3485
Alide2_3486	PF00005	ABC transporter
Alide2_3486	PF12848	ABC transporter
Alide2_3487	PF00270	DEAD/DEAH box helicase
Alide2_3487	PF00271	Helicase conserved C-terminal domain
Alide2_3488	PF00246	Zinc carboxypeptidase
Alide2_3489	PF07589	Alide2_3489
Alide2_3494	PF04172	Alide2_3494
Alide2_3495	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3495	PF03466	LysR substrate binding domain
Alide2_3496	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_3496	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_3496	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_3497	PF02515	CoA-transferase family III
Alide2_3498	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3500	PF13511	Alide2_3500
Alide2_3501	PF01370	NAD dependent epimerase/dehydratase family
Alide2_3502	PF00111	2Fe-2S iron-sulfur cluster binding domain
Alide2_3502	PF00175	Oxidoreductase NAD-binding domain
Alide2_3502	PF00970	Oxidoreductase FAD-binding domain
Alide2_3503	PF00291	Pyridoxal-phosphate dependent enzyme
Alide2_3504	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3504	PF03466	LysR substrate binding domain
Alide2_3505	PF01208	Uroporphyrinogen decarboxylase (URO-D)
Alide2_3506	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3507	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3508	PF04794	YdjC-like protein
Alide2_3509	PF04138	Alide2_3509
Alide2_3510	PF13231	Alide2_3510
Alide2_3511	PF00535	Glycosyl transferase family 2
Alide2_3512	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
Alide2_3513	PF01743	Poly A polymerase head domain
Alide2_3513	PF12626	Polymerase A arginine-rich C-terminus
Alide2_3513	PF12627	Probable RNA and SrmB- binding site of polymerase A
Alide2_3514	PF12710	haloacid dehalogenase-like hydrolase
Alide2_3515	PF00308	Bacterial dnaA  protein
Alide2_3516	PF01019	Gamma-glutamyltranspeptidase
Alide2_3517	PF00586	AIR synthase related protein, N-terminal domain
Alide2_3517	PF02769	AIR synthase related protein, C-terminal domain
Alide2_3518	PF01594	Alide2_3518
Alide2_3519	PF00582	Universal stress protein family
Alide2_3520	PF13369	Alide2_3520
Alide2_3520	PF13371	Tetratricopeptide repeat
Alide2_3521	PF03023	Alide2_3521
Alide2_3522	PF01649	Ribosomal protein S20
Alide2_3523	PF01863	Protein of unknown function DUF45
Alide2_3525	PF03050	Alide2_3525
Alide2_3525	PF13005	Alide2_3525
Alide2_3525	PF13007	Alide2_3525
Alide2_3525	PF13817	Alide2_3525
Alide2_3526	PF05717	Alide2_3526
Alide2_3527	PF01527	Transposase
Alide2_3528	PF00665	Integrase core domain
Alide2_3528	PF13276	Alide2_3528
Alide2_3529	PF01527	Transposase
Alide2_3531	PF13609	Gram-negative porin
Alide2_3532	PF01695	IstB-like ATP binding protein
Alide2_3533	PF00665	Integrase core domain
Alide2_3537	PF03737	Demethylmenaquinone methyltransferase
Alide2_3538	PF12112	Protein of unknown function (DUF3579)
Alide2_3539	PF00202	Aminotransferase class-III
Alide2_3540	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
Alide2_3540	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
Alide2_3541	PF04343	Alide2_3541
Alide2_3542	PF11160	Alide2_3542
Alide2_3543	PF03692	Alide2_3543
Alide2_3545	PF02421	Ferrous iron transport protein B
Alide2_3545	PF07664	Alide2_3545
Alide2_3545	PF07670	Nucleoside recognition
Alide2_3546	PF04023	FeoA domain
Alide2_3547	PF03692	Alide2_3547
Alide2_3548	PF04199	Putative cyclase
Alide2_3549	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3549	PF03466	LysR substrate binding domain
Alide2_3550	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3551	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3551	PF12911	Alide2_3551
Alide2_3552	PF00005	ABC transporter
Alide2_3552	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
Alide2_3553	PF00005	ABC transporter
Alide2_3553	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
Alide2_3554	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
Alide2_3555	PF04775	Acyl-CoA thioester hydrolase/BAAT N-terminal region
Alide2_3555	PF08840	BAAT / Acyl-CoA thioester hydrolase C terminal
Alide2_3556	PF00962	Adenosine/AMP deaminase
Alide2_3557	PF05899	Protein of unknown function (DUF861)
Alide2_3558	PF01614	Bacterial transcriptional regulator
Alide2_3558	PF09339	IclR helix-turn-helix domain
Alide2_3559	PF00497	Bacterial extracellular solute-binding proteins, family 3
Alide2_3560	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3561	PF00005	ABC transporter
Alide2_3562	PF01266	FAD dependent oxidoreductase
Alide2_3563	PF02608	Basic membrane protein
Alide2_3564	PF02608	Basic membrane protein
Alide2_3565	PF02653	Alide2_3565
Alide2_3566	PF02653	Alide2_3566
Alide2_3567	PF00005	ABC transporter
Alide2_3569	PF13358	DDE superfamily endonuclease
Alide2_3569	PF13565	Alide2_3569
Alide2_3571	PF13545	Crp-like helix-turn-helix domain
Alide2_3572	PF13609	Gram-negative porin
Alide2_3573	PF01230	HIT domain
Alide2_3574	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
Alide2_3574	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Alide2_3575	PF07690	Major Facilitator Superfamily
Alide2_3576	PF01715	IPP transferase
Alide2_3577	PF00005	ABC transporter
Alide2_3578	PF00011	Hsp20/alpha crystallin family
Alide2_3579	PF02687	Alide2_3579
Alide2_3580	PF00291	Pyridoxal-phosphate dependent enzyme
Alide2_3581	PF07143	Hydroxyneurosporene synthase (CrtC)
Alide2_3581	PF17186	Alide2_3581
Alide2_3582	PF02653	Alide2_3582
Alide2_3583	PF02653	Alide2_3583
Alide2_3584	PF13458	Periplasmic binding protein
Alide2_3585	PF13458	Periplasmic binding protein
Alide2_3586	PF00005	ABC transporter
Alide2_3587	PF00005	ABC transporter
Alide2_3587	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_3588	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3588	PF03459	TOBE domain
Alide2_3589	PF13531	Bacterial extracellular solute-binding protein
Alide2_3590	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3591	PF00005	ABC transporter
Alide2_3591	PF03459	TOBE domain
Alide2_3593	PF12849	PBP superfamily domain
Alide2_3594	PF00005	ABC transporter
Alide2_3595	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3596	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3596	PF12727	PBP superfamily domain
Alide2_3597	PF13091	PLD-like domain
Alide2_3598	PF00501	AMP-binding enzyme
Alide2_3598	PF13193	AMP-binding enzyme C-terminal domain
Alide2_3599	PF01807	CHC2 zinc finger
Alide2_3599	PF08275	DNA primase catalytic core, N-terminal domain
Alide2_3599	PF10410	DnaB-helicase binding domain of primase
Alide2_3599	PF13662	Toprim domain
Alide2_3600	PF00140	Sigma-70 factor, region 1
Alide2_3600	PF03979	Sigma-70 factor, region 1
Alide2_3600	PF04539	Sigma-70 region 3
Alide2_3600	PF04542	Sigma-70 region 2
Alide2_3600	PF04545	Sigma-70, region 4
Alide2_3600	PF04546	Sigma-70, non-essential region
Alide2_3602	PF03352	Methyladenine glycosylase
Alide2_3603	PF02558	Ketopantoate reductase PanE/ApbA
Alide2_3603	PF08546	Ketopantoate reductase PanE/ApbA C terminal
Alide2_3604	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3605	PF02515	CoA-transferase family III
Alide2_3606	PF00682	HMGL-like
Alide2_3607	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3607	PF03466	LysR substrate binding domain
Alide2_3608	PF01638	HxlR-like helix-turn-helix
Alide2_3609	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
Alide2_3610	PF00919	Uncharacterized protein family UPF0004
Alide2_3610	PF04055	Radical SAM superfamily
Alide2_3611	PF05233	Alide2_3611
Alide2_3611	PF07879	Alide2_3611
Alide2_3612	PF00076	RNA recognition motif
Alide2_3614	PF02824	TGS domain
Alide2_3614	PF04607	Region found in RelA / SpoT proteins
Alide2_3614	PF13291	ACT domain
Alide2_3614	PF13328	HD domain
Alide2_3615	PF12697	Alpha/beta hydrolase family
Alide2_3616	PF00106	short chain dehydrogenase
Alide2_3617	PF04402	Protein of unknown function (DUF541)
Alide2_3618	PF00072	Response regulator receiver domain
Alide2_3618	PF00486	Transcriptional regulatory protein, C terminal
Alide2_3619	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_3619	PF00672	HAMP domain
Alide2_3619	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_3619	PF16524	Alide2_3619
Alide2_3620	PF02542	YgbB family
Alide2_3621	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Alide2_3622	PF00270	DEAD/DEAH box helicase
Alide2_3622	PF00271	Helicase conserved C-terminal domain
Alide2_3622	PF02559	CarD-like/TRCF domain
Alide2_3622	PF03461	TRCF domain
Alide2_3624	PF08125	Mannitol dehydrogenase C-terminal domain
Alide2_3624	PF13419	Haloacid dehalogenase-like hydrolase
Alide2_3625	PF12710	haloacid dehalogenase-like hydrolase
Alide2_3626	PF00072	Response regulator receiver domain
Alide2_3626	PF04397	LytTr DNA-binding domain
Alide2_3627	PF02535	Alide2_3627
Alide2_3628	PF01738	Dienelactone hydrolase family
Alide2_3629	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_3630	PF02515	CoA-transferase family III
Alide2_3631	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3632	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3632	PF03466	LysR substrate binding domain
Alide2_3633	PF02627	Carboxymuconolactone decarboxylase family
Alide2_3634	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3635	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_3636	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3636	PF03466	LysR substrate binding domain
Alide2_3637	PF00476	DNA polymerase family A
Alide2_3637	PF01367	5'-3' exonuclease, C-terminal SAM fold
Alide2_3637	PF01612	3'-5' exonuclease
Alide2_3637	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
Alide2_3640	PF01636	Phosphotransferase enzyme family
Alide2_3642	PF00497	Bacterial extracellular solute-binding proteins, family 3
Alide2_3642	PF00990	GGDEF domain
Alide2_3643	PF05787	Bacterial protein of unknown function (DUF839)
Alide2_3644	PF00580	UvrD/REP helicase N-terminal domain
Alide2_3644	PF13361	UvrD-like helicase C-terminal domain
Alide2_3645	PF00478	IMP dehydrogenase / GMP reductase domain
Alide2_3646	PF09919	Alide2_3646
Alide2_3647	PF01618	Alide2_3647
Alide2_3649	PF02514	Alide2_3649
Alide2_3650	PF00593	TonB dependent receptor
Alide2_3650	PF07715	TonB-dependent Receptor Plug Domain
Alide2_3651	PF05940	Alide2_3651
Alide2_3652	PF00005	ABC transporter
Alide2_3653	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3654	PF02621	Menaquinone biosynthesis
Alide2_3655	PF00593	TonB dependent receptor
Alide2_3655	PF07715	TonB-dependent Receptor Plug Domain
Alide2_3656	PF00027	Cyclic nucleotide-binding domain
Alide2_3656	PF13545	Crp-like helix-turn-helix domain
Alide2_3658	PF04314	Protein of unknown function (DUF461)
Alide2_3659	PF07690	Major Facilitator Superfamily
Alide2_3661	PF03795	YCII-related domain
Alide2_3662	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3663	PF01144	Coenzyme A transferase
Alide2_3664	PF01144	Coenzyme A transferase
Alide2_3665	PF02426	Muconolactone delta-isomerase
Alide2_3666	PF00753	Metallo-beta-lactamase superfamily
Alide2_3667	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3667	PF03466	LysR substrate binding domain
Alide2_3669	PF00990	GGDEF domain
Alide2_3669	PF13188	PAS domain
Alide2_3670	PF00270	DEAD/DEAH box helicase
Alide2_3670	PF00271	Helicase conserved C-terminal domain
Alide2_3671	PF13458	Periplasmic binding protein
Alide2_3672	PF00929	Exonuclease
Alide2_3673	PF01435	Peptidase family M48
Alide2_3673	PF16491	Alide2_3673
Alide2_3674	PF01329	Pterin 4 alpha carbinolamine dehydratase
Alide2_3675	PF03193	Protein of unknown function, DUF258
Alide2_3676	PF00916	Alide2_3676
Alide2_3676	PF01740	STAS domain
Alide2_3677	PF00155	Aminotransferase class I and II
Alide2_3678	PF03186	Alide2_3678
Alide2_3679	PF00293	NUDIX domain
Alide2_3680	PF01245	Ribosomal protein L19
Alide2_3681	PF01746	tRNA (Guanine-1)-methyltransferase
Alide2_3682	PF01782	RimM N-terminal domain
Alide2_3682	PF05239	PRC-barrel domain
Alide2_3683	PF00886	Ribosomal protein S16
Alide2_3684	PF13420	Acetyltransferase (GNAT) domain
Alide2_3686	PF01384	Alide2_3686
Alide2_3687	PF01865	Protein of unknown function DUF47
Alide2_3688	PF13505	Outer membrane protein beta-barrel domain
Alide2_3689	PF04342	Alide2_3689
Alide2_3690	PF00005	ABC transporter
Alide2_3691	PF00005	ABC transporter
Alide2_3691	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_3692	PF02653	Alide2_3692
Alide2_3693	PF02653	Alide2_3693
Alide2_3694	PF00004	ATPase family associated with various cellular activities (AAA)
Alide2_3694	PF12002	MgsA AAA+ ATPase C terminal
Alide2_3694	PF16193	Alide2_3694
Alide2_3695	PF00589	Phage integrase family
Alide2_3695	PF13495	Phage integrase, N-terminal SAM-like domain
Alide2_3696	PF07883	Cupin domain
Alide2_3697	PF13180	PDZ domain
Alide2_3698	PF14279	Alide2_3698
Alide2_3699	PF06231	Alide2_3699
Alide2_3700	PF13470	Alide2_3700
Alide2_3702	PF13276	Alide2_3702
Alide2_3702	PF13683	Alide2_3702
Alide2_3703	PF01527	Transposase
Alide2_3705	PF09864	Membrane-bound lysozyme-inhibitor of c-type lysozyme
Alide2_3707	PF03167	Uracil DNA glycosylase superfamily
Alide2_3708	PF01040	UbiA prenyltransferase family
Alide2_3709	PF03548	Outer membrane lipoprotein carrier protein LolA
Alide2_3710	PF01580	FtsK/SpoIIIE family
Alide2_3710	PF09397	Ftsk gamma domain
Alide2_3710	PF13491	Alide2_3710
Alide2_3711	PF07992	Pyridine nucleotide-disulphide oxidoreductase
Alide2_3712	PF00830	Ribosomal L28 family
Alide2_3713	PF00471	Ribosomal protein L33
Alide2_3714	PF01189	NOL1/NOP2/sun family
Alide2_3714	PF17125	Alide2_3714
Alide2_3715	PF00551	Formyl transferase
Alide2_3716	PF04337	Protein of unknown function, DUF480
Alide2_3717	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_3717	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_3717	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_3718	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_3718	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_3719	PF14279	Alide2_3719
Alide2_3720	PF01687	Riboflavin kinase
Alide2_3720	PF06574	FAD synthetase
Alide2_3721	PF00133	tRNA synthetases class I (I, L, M and V)
Alide2_3721	PF06827	Zinc finger found in FPG and IleRS
Alide2_3721	PF08264	Anticodon-binding domain of tRNA
Alide2_3722	PF01252	Alide2_3722
Alide2_3723	PF00356	Bacterial regulatory proteins, lacI family
Alide2_3723	PF13377	Periplasmic binding protein-like domain
Alide2_3724	PF13343	Bacterial extracellular solute-binding protein
Alide2_3725	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3726	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3727	PF00005	ABC transporter
Alide2_3727	PF08402	TOBE domain
Alide2_3728	PF00149	Calcineurin-like phosphoesterase
Alide2_3729	PF01895	PhoU domain
Alide2_3729	PF02690	Alide2_3729
Alide2_3730	PF13593	SBF-like CPA transporter family (DUF4137)
Alide2_3731	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3731	PF03466	LysR substrate binding domain
Alide2_3732	PF00293	NUDIX domain
Alide2_3733	PF00107	Zinc-binding dehydrogenase
Alide2_3733	PF08240	Alcohol dehydrogenase GroES-like domain
Alide2_3734	PF00892	EamA-like transporter family
Alide2_3735	PF00563	EAL domain
Alide2_3735	PF00990	GGDEF domain
Alide2_3735	PF12860	Alide2_3735
Alide2_3736	PF03480	Bacterial extracellular solute-binding protein, family 7
Alide2_3737	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_3738	PF01970	Alide2_3738
Alide2_3739	PF07331	Alide2_3739
Alide2_3740	PF00437	Type II/IV secretion system protein
Alide2_3740	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
Alide2_3742	PF03167	Uracil DNA glycosylase superfamily
Alide2_3743	PF01026	TatD related DNase
Alide2_3744	PF11127	Protein of unknown function (DUF2892)
Alide2_3745	PF01022	Bacterial regulatory protein, arsR family
Alide2_3746	PF02627	Carboxymuconolactone decarboxylase family
Alide2_3747	PF13365	Trypsin-like peptidase domain
Alide2_3748	PF07726	ATPase family associated with various cellular activities (AAA)
Alide2_3749	PF01882	Alide2_3749
Alide2_3750	PF00092	von Willebrand factor type A domain
Alide2_3750	PF07584	Alide2_3750
Alide2_3750	PF13519	von Willebrand factor type A domain
Alide2_3751	PF00501	AMP-binding enzyme
Alide2_3751	PF13193	AMP-binding enzyme C-terminal domain
Alide2_3751	PF16177	Alide2_3751
Alide2_3752	PF00005	ABC transporter
Alide2_3752	PF00571	CBS domain
Alide2_3753	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3754	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
Alide2_3755	PF00027	Cyclic nucleotide-binding domain
Alide2_3755	PF13545	Crp-like helix-turn-helix domain
Alide2_3756	PF00206	Lyase
Alide2_3756	PF10415	Fumarase C C-terminus
Alide2_3757	PF05681	Alide2_3757
Alide2_3757	PF05683	Fumarase C-terminus
Alide2_3759	PF01523	Putative modulator of DNA gyrase
Alide2_3760	PF04751	Protein of unknown function (DUF615)
Alide2_3761	PF00994	Probable molybdopterin binding domain
Alide2_3762	PF00107	Zinc-binding dehydrogenase
Alide2_3762	PF08240	Alcohol dehydrogenase GroES-like domain
Alide2_3763	PF00881	Nitroreductase family
Alide2_3764	PF00132	Bacterial transferase hexapeptide (six repeats)
Alide2_3765	PF00588	SpoU rRNA Methylase family
Alide2_3766	PF00459	Inositol monophosphatase family
Alide2_3767	PF04290	Alide2_3767
Alide2_3768	PF06808	Alide2_3768
Alide2_3769	PF00270	DEAD/DEAH box helicase
Alide2_3769	PF00271	Helicase conserved C-terminal domain
Alide2_3769	PF06224	Alide2_3769
Alide2_3769	PF08494	Alide2_3769
Alide2_3770	PF03480	Bacterial extracellular solute-binding protein, family 7
Alide2_3771	PF02779	Transketolase, pyrimidine binding domain
Alide2_3771	PF02780	Transketolase, C-terminal domain
Alide2_3771	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
Alide2_3772	PF00348	Polyprenyl synthetase
Alide2_3773	PF02609	Exonuclease VII small subunit
Alide2_3774	PF00355	Rieske [2Fe-2S] domain
Alide2_3774	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
Alide2_3776	PF00581	Rhodanese-like domain
Alide2_3777	PF00171	Aldehyde dehydrogenase family
Alide2_3778	PF00753	Metallo-beta-lactamase superfamily
Alide2_3778	PF03772	Alide2_3778
Alide2_3778	PF13567	Alide2_3778
Alide2_3779	PF14588	YjgF/chorismate_mutase-like, putative endoribonuclease
Alide2_3780	PF00521	DNA gyrase/topoisomerase IV, subunit A
Alide2_3780	PF03989	DNA gyrase C-terminal domain, beta-propeller
Alide2_3781	PF00204	DNA gyrase B
Alide2_3781	PF00986	DNA gyrase B subunit, carboxyl terminus
Alide2_3781	PF01751	Toprim domain
Alide2_3781	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_3782	PF07690	Major Facilitator Superfamily
Alide2_3784	PF13489	Methyltransferase domain
Alide2_3785	PF00701	Dihydrodipicolinate synthetase family
Alide2_3786	PF06804	NlpB/DapX lipoprotein
Alide2_3788	PF08007	Cupin superfamily protein
Alide2_3790	PF00692	dUTPase
Alide2_3792	PF02441	Flavoprotein
Alide2_3792	PF04127	DNA / pantothenate metabolism flavoprotein
Alide2_3793	PF00117	Glutamine amidotransferase class-I
Alide2_3793	PF06418	CTP synthase N-terminus
Alide2_3794	PF00793	DAHP synthetase I family
Alide2_3795	PF07045	Protein of unknown function (DUF1330)
Alide2_3796	PF00113	Enolase, C-terminal TIM barrel domain
Alide2_3796	PF03952	Enolase, N-terminal domain
Alide2_3797	PF04977	Septum formation initiator
Alide2_3798	PF00005	ABC transporter
Alide2_3799	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3800	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3801	PF00497	Bacterial extracellular solute-binding proteins, family 3
Alide2_3802	PF01430	Hsp33 protein
Alide2_3803	PF00132	Bacterial transferase hexapeptide (six repeats)
Alide2_3804	PF04305	Alide2_3804
Alide2_3805	PF00563	EAL domain
Alide2_3805	PF08668	HDOD domain
Alide2_3806	PF00563	EAL domain
Alide2_3806	PF08668	HDOD domain
Alide2_3807	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3808	PF08447	PAS fold
Alide2_3809	PF01638	HxlR-like helix-turn-helix
Alide2_3810	PF02075	Crossover junction endodeoxyribonuclease RuvC
Alide2_3811	PF01527	Transposase
Alide2_3812	PF13683	Alide2_3812
Alide2_3814	PF00912	Transglycosylase
Alide2_3815	PF01488	Shikimate / quinate 5-dehydrogenase
Alide2_3815	PF08501	Shikimate dehydrogenase substrate binding domain
Alide2_3816	PF13103	TonB C terminal
Alide2_3817	PF00773	RNB domain
Alide2_3818	PF04542	Sigma-70 region 2
Alide2_3818	PF08281	Sigma-70, region 4
Alide2_3819	PF13668	Ferritin-like domain
Alide2_3820	PF00034	Cytochrome c
Alide2_3821	PF04932	Alide2_3821
Alide2_3821	PF11846	Alide2_3821
Alide2_3821	PF15864	Alide2_3821
Alide2_3822	PF05728	Uncharacterised protein family (UPF0227)
Alide2_3823	PF01098	Alide2_3823
Alide2_3824	PF01523	Putative modulator of DNA gyrase
Alide2_3825	PF00793	DAHP synthetase I family
Alide2_3827	PF01225	Mur ligase family, catalytic domain
Alide2_3827	PF02875	Mur ligase family, glutamate ligase domain
Alide2_3827	PF08245	Mur ligase middle domain
Alide2_3829	PF08534	Redoxin
Alide2_3830	PF00364	Biotin-requiring enzyme
Alide2_3831	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
Alide2_3831	PF02785	Biotin carboxylase C-terminal domain
Alide2_3831	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
Alide2_3832	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
Alide2_3833	PF11906	Alide2_3833
Alide2_3833	PF13719	Alide2_3833
Alide2_3834	PF00294	pfkB family carbohydrate kinase
Alide2_3836	PF00268	Ribonucleotide reductase, small chain
Alide2_3837	PF00317	Ribonucleotide reductase, all-alpha domain
Alide2_3837	PF02867	Ribonucleotide reductase, barrel domain
Alide2_3837	PF03477	ATP cone domain
Alide2_3838	PF01510	N-acetylmuramoyl-L-alanine amidase
Alide2_3839	PF00072	Response regulator receiver domain
Alide2_3839	PF00158	Sigma-54 interaction domain
Alide2_3839	PF02954	Bacterial regulatory protein, Fis family
Alide2_3840	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_3840	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_3840	PF13188	PAS domain
Alide2_3842	PF01578	Alide2_3842
Alide2_3843	PF00448	SRP54-type protein, GTPase domain
Alide2_3843	PF02881	SRP54-type protein, helical bundle domain
Alide2_3843	PF02978	Signal peptide binding domain
Alide2_3844	PF00919	Uncharacterized protein family UPF0004
Alide2_3844	PF01938	TRAM domain
Alide2_3844	PF04055	Radical SAM superfamily
Alide2_3847	PF05299	M61 glycyl aminopeptidase
Alide2_3848	PF10411	Disulfide bond isomerase protein N-terminus
Alide2_3848	PF13098	Thioredoxin-like domain
Alide2_3849	PF01494	FAD binding domain
Alide2_3850	PF01926	50S ribosome-binding GTPase
Alide2_3850	PF06071	Protein of unknown function (DUF933)
Alide2_3851	PF13356	Domain of unknown function (DUF4102)
Alide2_3852	PF01527	Transposase
Alide2_3853	PF13276	Alide2_3853
Alide2_3854	PF01527	Transposase
Alide2_3855	PF05717	Alide2_3855
Alide2_3856	PF03050	Alide2_3856
Alide2_3856	PF13005	Alide2_3856
Alide2_3856	PF13007	Alide2_3856
Alide2_3856	PF13817	Alide2_3856
Alide2_3858	PF00665	Integrase core domain
Alide2_3860	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_3860	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_3860	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_3860	PF12418	Alide2_3860
Alide2_3860	PF12806	Alide2_3860
Alide2_3861	PF01323	DSBA-like thioredoxin domain
Alide2_3862	PF07690	Major Facilitator Superfamily
Alide2_3863	PF06821	Serine hydrolase
Alide2_3864	PF07690	Major Facilitator Superfamily
Alide2_3865	PF05853	Prokaryotic protein of unknown function (DUF849)
Alide2_3866	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
Alide2_3867	PF00107	Zinc-binding dehydrogenase
Alide2_3867	PF08240	Alcohol dehydrogenase GroES-like domain
Alide2_3868	PF00582	Universal stress protein family
Alide2_3868	PF01814	Hemerythrin HHE cation binding domain
Alide2_3869	PF00355	Rieske [2Fe-2S] domain
Alide2_3870	PF00196	Bacterial regulatory proteins, luxR family
Alide2_3870	PF13401	AAA domain
Alide2_3871	PF06980	Alide2_3871
Alide2_3872	PF07044	Protein of unknown function (DUF1329)
Alide2_3873	PF14870	Photosynthesis system II assembly factor YCF48
Alide2_3874	PF03176	MMPL family
Alide2_3875	PF03601	Alide2_3875
Alide2_3877	PF09335	Alide2_3877
Alide2_3878	PF01207	Dihydrouridine synthase (Dus)
Alide2_3879	PF02954	Bacterial regulatory protein, Fis family
Alide2_3880	PF01808	AICARFT/IMPCHase bienzyme
Alide2_3880	PF02142	MGS-like domain
Alide2_3881	PF00202	Aminotransferase class-III
Alide2_3882	PF08543	Phosphomethylpyrimidine kinase
Alide2_3883	PF00301	Rubredoxin
Alide2_3884	PF00072	Response regulator receiver domain
Alide2_3885	PF00072	Response regulator receiver domain
Alide2_3886	PF01584	CheW-like domain
Alide2_3887	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
Alide2_3887	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
Alide2_3888	PF00072	Response regulator receiver domain
Alide2_3888	PF01584	CheW-like domain
Alide2_3888	PF01627	Hpt domain
Alide2_3888	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_3888	PF02895	Signal transducing histidine kinase, homodimeric domain
Alide2_3889	PF02622	Uncharacterized ACR, COG1678
Alide2_3890	PF03652	Uncharacterised protein family (UPF0081)
Alide2_3891	PF00156	Phosphoribosyl transferase domain
Alide2_3892	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
Alide2_3892	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
Alide2_3893	PF07969	Amidohydrolase family
Alide2_3894	PF01553	Acyltransferase
Alide2_3895	PF00005	ABC transporter
Alide2_3895	PF08402	TOBE domain
Alide2_3896	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_3897	PF03960	ArsC family
Alide2_3898	PF13180	PDZ domain
Alide2_3898	PF13365	Trypsin-like peptidase domain
Alide2_3899	PF00072	Response regulator receiver domain
Alide2_3899	PF00486	Transcriptional regulatory protein, C terminal
Alide2_3900	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_3900	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_3901	PF13091	PLD-like domain
Alide2_3902	PF00033	Cytochrome b(N-terminal)/b6/petB
Alide2_3902	PF00111	2Fe-2S iron-sulfur cluster binding domain
Alide2_3902	PF00175	Oxidoreductase NAD-binding domain
Alide2_3902	PF00970	Oxidoreductase FAD-binding domain
Alide2_3903	PF00115	Cytochrome C and Quinol oxidase polypeptide I
Alide2_3905	PF00033	Cytochrome b(N-terminal)/b6/petB
Alide2_3905	PF02662	Alide2_3905
Alide2_3905	PF12838	4Fe-4S dicluster domain
Alide2_3906	PF02630	SCO1/SenC
Alide2_3907	PF01040	UbiA prenyltransferase family
Alide2_3908	PF00115	Cytochrome C and Quinol oxidase polypeptide I
Alide2_3911	PF02628	Alide2_3911
Alide2_3912	PF04357	Alide2_3912
Alide2_3913	PF01103	Surface antigen
Alide2_3913	PF17243	Alide2_3913
Alide2_3914	PF05762	VWA domain containing CoxE-like protein
Alide2_3915	PF03972	MmgE/PrpD family
Alide2_3916	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_3917	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_3917	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_3917	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_3918	PF02515	CoA-transferase family III
Alide2_3919	PF00392	Bacterial regulatory proteins, gntR family
Alide2_3919	PF07702	UTRA domain
Alide2_3920	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3921	PF13302	Acetyltransferase (GNAT) domain
Alide2_3922	PF00004	ATPase family associated with various cellular activities (AAA)
Alide2_3923	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
Alide2_3924	PF00582	Universal stress protein family
Alide2_3925	PF08897	Alide2_3925
Alide2_3926	PF01614	Bacterial transcriptional regulator
Alide2_3926	PF09339	IclR helix-turn-helix domain
Alide2_3927	PF01144	Coenzyme A transferase
Alide2_3928	PF01144	Coenzyme A transferase
Alide2_3929	PF00108	Thiolase, N-terminal domain
Alide2_3929	PF02803	Thiolase, C-terminal domain
Alide2_3930	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_3931	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3933	PF03466	LysR substrate binding domain
Alide2_3934	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3935	PF01546	Peptidase family M20/M25/M40
Alide2_3935	PF07687	Peptidase dimerisation domain
Alide2_3936	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3937	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3938	PF03972	MmgE/PrpD family
Alide2_3939	PF04303	PrpF protein
Alide2_3940	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3941	PF00694	Aconitase C-terminal domain
Alide2_3942	PF00330	Aconitase family (aconitate hydratase)
Alide2_3943	PF13714	Phosphoenolpyruvate phosphomutase
Alide2_3944	PF00392	Bacterial regulatory proteins, gntR family
Alide2_3944	PF07702	UTRA domain
Alide2_3945	PF00999	Sodium/hydrogen exchanger family
Alide2_3945	PF02254	TrkA-N domain
Alide2_3946	PF01810	Alide2_3946
Alide2_3947	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
Alide2_3948	PF13663	Alide2_3948
Alide2_3949	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_3949	PF03466	LysR substrate binding domain
Alide2_3950	PF00588	SpoU rRNA Methylase family
Alide2_3951	PF00156	Phosphoribosyl transferase domain
Alide2_3953	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
Alide2_3953	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
Alide2_3953	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
Alide2_3954	PF00115	Cytochrome C and Quinol oxidase polypeptide I
Alide2_3956	PF04442	Cytochrome c oxidase assembly protein CtaG/Cox11
Alide2_3957	PF11174	Alide2_3957
Alide2_3958	PF00510	Cytochrome c oxidase subunit III
Alide2_3959	PF11137	Alide2_3959
Alide2_3960	PF02104	Alide2_3960
Alide2_3962	PF02628	Alide2_3962
Alide2_3963	PF01040	UbiA prenyltransferase family
Alide2_3964	PF02630	SCO1/SenC
Alide2_3965	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_3966	PF00140	Sigma-70 factor, region 1
Alide2_3966	PF04542	Sigma-70 region 2
Alide2_3966	PF04545	Sigma-70, region 4
Alide2_3967	PF03050	Alide2_3967
Alide2_3967	PF13005	Alide2_3967
Alide2_3967	PF13007	Alide2_3967
Alide2_3967	PF13817	Alide2_3967
Alide2_3968	PF05717	Alide2_3968
Alide2_3969	PF01527	Transposase
Alide2_3970	PF13276	Alide2_3970
Alide2_3971	PF01527	Transposase
Alide2_3973	PF05036	Sporulation related domain
Alide2_3974	PF11720	Peptidase inhibitor I78 family
Alide2_3975	PF04055	Radical SAM superfamily
Alide2_3975	PF06969	HemN C-terminal domain
Alide2_3976	PF01725	Ham1 family
Alide2_3977	PF01138	3' exoribonuclease family, domain 1
Alide2_3977	PF03725	3' exoribonuclease family, domain 2
Alide2_3978	PF13672	Protein phosphatase 2C
Alide2_3979	PF00069	Protein kinase domain
Alide2_3980	PF03755	Alide2_3980
Alide2_3980	PF08340	Alide2_3980
Alide2_3981	PF14870	Photosynthesis system II assembly factor YCF48
Alide2_3984	PF04865	Alide2_3984
Alide2_3985	PF04965	Gene 25-like lysozyme
Alide2_3991	PF13699	Alide2_3991
Alide2_3993	PF13699	Alide2_3993
Alide2_3994	PF00004	ATPase family associated with various cellular activities (AAA)
Alide2_3995	PF14065	Alide2_3995
Alide2_3998	PF06841	Alide2_3998
Alide2_3999	PF04984	Phage tail sheath protein
Alide2_3999	PF17482	Alide2_3999
Alide2_4000	PF00625	Guanylate kinase
Alide2_4001	PF01192	RNA polymerase Rpb6
Alide2_4002	PF02824	TGS domain
Alide2_4002	PF04607	Region found in RelA / SpoT proteins
Alide2_4002	PF13291	ACT domain
Alide2_4002	PF13328	HD domain
Alide2_4003	PF01272	Transcription elongation factor, GreA/GreB, C-term
Alide2_4003	PF03449	Transcription elongation factor, N-terminal
Alide2_4005	PF00312	Ribosomal protein S15
Alide2_4006	PF00013	KH domain
Alide2_4006	PF00575	S1 RNA binding domain
Alide2_4006	PF01138	3' exoribonuclease family, domain 1
Alide2_4006	PF03725	3' exoribonuclease family, domain 2
Alide2_4006	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
Alide2_4007	PF00107	Zinc-binding dehydrogenase
Alide2_4007	PF08240	Alcohol dehydrogenase GroES-like domain
Alide2_4008	PF00121	Triosephosphate isomerase
Alide2_4009	PF03840	Preprotein translocase SecG subunit
Alide2_4010	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
Alide2_4011	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
Alide2_4012	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
Alide2_4013	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
Alide2_4014	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
Alide2_4015	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
Alide2_4015	PF10531	SLBB domain
Alide2_4015	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
Alide2_4016	PF00384	Molybdopterin oxidoreductase
Alide2_4016	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
Alide2_4016	PF13510	2Fe-2S iron-sulfur cluster binding domain
Alide2_4017	PF00146	NADH dehydrogenase
Alide2_4018	PF12838	4Fe-4S dicluster domain
Alide2_4019	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
Alide2_4020	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
Alide2_4021	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
Alide2_4021	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
Alide2_4022	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
Alide2_4023	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
Alide2_4024	PF10993	Alide2_4024
Alide2_4025	PF06676	Alide2_4025
Alide2_4027	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Alide2_4027	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
Alide2_4028	PF01119	DNA mismatch repair protein, C-terminal domain
Alide2_4028	PF08676	MutL C terminal dimerisation domain
Alide2_4028	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_4029	PF05433	Alide2_4029
Alide2_4030	PF09335	Alide2_4030
Alide2_4031	PF01979	Amidohydrolase family
Alide2_4032	PF00860	Permease family
Alide2_4033	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4033	PF03466	LysR substrate binding domain
Alide2_4034	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
Alide2_4034	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
Alide2_4035	PF00941	FAD binding domain in molybdopterin dehydrogenase
Alide2_4035	PF01799	[2Fe-2S] binding domain
Alide2_4035	PF03450	CO dehydrogenase flavoprotein C-terminal domain
Alide2_4036	PF07883	Cupin domain
Alide2_4037	PF01520	N-acetylmuramoyl-L-alanine amidase
Alide2_4037	PF11741	AMIN domain
Alide2_4038	PF02367	Uncharacterised P-loop hydrolase UPF0079
Alide2_4039	PF08331	Alide2_4039
Alide2_4039	PF13484	Alide2_4039
Alide2_4040	PF03547	Alide2_4040
Alide2_4041	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4042	PF00589	Phage integrase family
Alide2_4042	PF02899	Phage integrase, N-terminal SAM-like domain
Alide2_4043	PF08241	Methyltransferase domain
Alide2_4044	PF01964	ThiC family
Alide2_4044	PF13667	ThiC-associated domain
Alide2_4046	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
Alide2_4047	PF09339	IclR helix-turn-helix domain
Alide2_4048	PF04199	Putative cyclase
Alide2_4049	PF00501	AMP-binding enzyme
Alide2_4049	PF13193	AMP-binding enzyme C-terminal domain
Alide2_4050	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_4051	PF13458	Periplasmic binding protein
Alide2_4052	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4053	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_4053	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_4053	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_4054	PF00091	Tubulin/FtsZ family, GTPase domain
Alide2_4054	PF12327	FtsZ family, C-terminal domain
Alide2_4055	PF02491	SHS2 domain inserted in FTSA
Alide2_4055	PF14450	Cell division protein FtsA
Alide2_4056	PF03799	Cell division protein FtsQ
Alide2_4056	PF08478	POTRA domain, FtsQ-type
Alide2_4057	PF01820	D-ala D-ala ligase N-terminus
Alide2_4057	PF07478	D-ala D-ala ligase C-terminus
Alide2_4058	PF01225	Mur ligase family, catalytic domain
Alide2_4058	PF02875	Mur ligase family, glutamate ligase domain
Alide2_4058	PF08245	Mur ligase middle domain
Alide2_4059	PF03033	Glycosyltransferase family 28 N-terminal domain
Alide2_4059	PF04101	Glycosyltransferase family 28 C-terminal domain
Alide2_4060	PF01098	Alide2_4060
Alide2_4061	PF02875	Mur ligase family, glutamate ligase domain
Alide2_4061	PF08245	Mur ligase middle domain
Alide2_4062	PF00953	Glycosyl transferase family 4
Alide2_4062	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
Alide2_4063	PF01225	Mur ligase family, catalytic domain
Alide2_4063	PF02875	Mur ligase family, glutamate ligase domain
Alide2_4063	PF08245	Mur ligase middle domain
Alide2_4064	PF01225	Mur ligase family, catalytic domain
Alide2_4064	PF02875	Mur ligase family, glutamate ligase domain
Alide2_4064	PF08245	Mur ligase middle domain
Alide2_4065	PF00905	Penicillin binding protein transpeptidase domain
Alide2_4065	PF03717	Penicillin-binding Protein dimerisation domain
Alide2_4066	PF04999	Alide2_4066
Alide2_4067	PF01795	MraW methylase family
Alide2_4068	PF02381	MraZ protein
Alide2_4069	PF00004	ATPase family associated with various cellular activities (AAA)
Alide2_4069	PF07724	AAA domain (Cdc48 subfamily)
Alide2_4069	PF10431	C-terminal, D2-small domain, of ClpB protein
Alide2_4070	PF00227	Proteasome subunit
Alide2_4071	PF13466	STAS domain
Alide2_4072	PF01258	Prokaryotic dksA/traR C4-type zinc finger
Alide2_4073	PF02492	CobW/HypB/UreG, nucleotide-binding domain
Alide2_4073	PF07683	Cobalamin synthesis protein cobW C-terminal domain
Alide2_4074	PF11534	Hexameric tyrosine-coordinated heme protein (HTHP)
Alide2_4075	PF00072	Response regulator receiver domain
Alide2_4076	PF00072	Response regulator receiver domain
Alide2_4076	PF12728	Helix-turn-helix domain
Alide2_4077	PF00072	Response regulator receiver domain
Alide2_4078	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_4078	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_4078	PF08448	PAS fold
Alide2_4079	PF00072	Response regulator receiver domain
Alide2_4079	PF12728	Helix-turn-helix domain
Alide2_4080	PF00072	Response regulator receiver domain
Alide2_4081	PF13487	HD domain
Alide2_4082	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_4082	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_4082	PF08448	PAS fold
Alide2_4083	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_4083	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_4084	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
Alide2_4084	PF00672	HAMP domain
Alide2_4084	PF12729	Alide2_4084
Alide2_4085	PF00589	Phage integrase family
Alide2_4085	PF02899	Phage integrase, N-terminal SAM-like domain
Alide2_4086	PF04340	Protein of unknown function, DUF484
Alide2_4087	PF01678	Diaminopimelate epimerase
Alide2_4088	PF00753	Metallo-beta-lactamase superfamily
Alide2_4089	PF01479	S4 domain
Alide2_4091	PF00291	Pyridoxal-phosphate dependent enzyme
Alide2_4094	PF02627	Carboxymuconolactone decarboxylase family
Alide2_4095	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4095	PF03466	LysR substrate binding domain
Alide2_4096	PF03328	HpcH/HpaI aldolase/citrate lyase family
Alide2_4097	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4098	PF02515	CoA-transferase family III
Alide2_4099	PF04909	Amidohydrolase
Alide2_4100	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4101	PF12802	MarR family
Alide2_4102	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_4103	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_4104	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_4104	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_4104	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_4105	PF00501	AMP-binding enzyme
Alide2_4105	PF13193	AMP-binding enzyme C-terminal domain
Alide2_4106	PF00766	Electron transfer flavoprotein FAD-binding domain
Alide2_4106	PF01012	Electron transfer flavoprotein domain
Alide2_4107	PF01012	Electron transfer flavoprotein domain
Alide2_4108	PF03060	Nitronate monooxygenase
Alide2_4109	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4110	PF02515	CoA-transferase family III
Alide2_4111	PF03061	Thioesterase superfamily
Alide2_4112	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_4113	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_4113	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_4113	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_4114	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_4114	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_4114	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_4115	PF00108	Thiolase, N-terminal domain
Alide2_4115	PF02803	Thiolase, C-terminal domain
Alide2_4116	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_4116	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
Alide2_4116	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Alide2_4117	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4117	PF03466	LysR substrate binding domain
Alide2_4118	PF01527	Transposase
Alide2_4119	PF00665	Integrase core domain
Alide2_4119	PF13276	Alide2_4119
Alide2_4120	PF01527	Transposase
Alide2_4122	PF12779	Alide2_4122
Alide2_4123	PF01435	Peptidase family M48
Alide2_4124	PF11227	Alide2_4124
Alide2_4125	PF01979	Amidohydrolase family
Alide2_4127	PF04343	Alide2_4127
Alide2_4128	PF02627	Carboxymuconolactone decarboxylase family
Alide2_4130	PF13458	Periplasmic binding protein
Alide2_4132	PF13609	Gram-negative porin
Alide2_4133	PF00083	Sugar (and other) transporter
Alide2_4134	PF04341	Alide2_4134
Alide2_4135	PF00474	Sodium:solute symporter family
Alide2_4136	PF00929	Exonuclease
Alide2_4137	PF00571	CBS domain
Alide2_4137	PF03445	Alide2_4137
Alide2_4137	PF10335	Alide2_4137
Alide2_4138	PF01323	DSBA-like thioredoxin domain
Alide2_4139	PF06945	Alide2_4139
Alide2_4140	PF04073	Aminoacyl-tRNA editing domain
Alide2_4141	PF00682	HMGL-like
Alide2_4142	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Alide2_4143	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
Alide2_4143	PF00364	Biotin-requiring enzyme
Alide2_4143	PF02785	Biotin carboxylase C-terminal domain
Alide2_4143	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
Alide2_4144	PF13548	Alide2_4144
Alide2_4145	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_4146	PF01039	Carboxyl transferase domain
Alide2_4147	PF00501	AMP-binding enzyme
Alide2_4147	PF13193	AMP-binding enzyme C-terminal domain
Alide2_4148	PF12625	Alide2_4148
Alide2_4148	PF12833	Helix-turn-helix domain
Alide2_4149	PF13417	Glutathione S-transferase, N-terminal domain
Alide2_4149	PF14497	Glutathione S-transferase, C-terminal domain
Alide2_4150	PF00732	GMC oxidoreductase
Alide2_4150	PF05199	GMC oxidoreductase
Alide2_4151	PF13458	Periplasmic binding protein
Alide2_4152	PF02653	Alide2_4152
Alide2_4153	PF00005	ABC transporter
Alide2_4153	PF02653	Alide2_4153
Alide2_4153	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_4154	PF00005	ABC transporter
Alide2_4155	PF00732	GMC oxidoreductase
Alide2_4155	PF05199	GMC oxidoreductase
Alide2_4156	PF00501	AMP-binding enzyme
Alide2_4156	PF13193	AMP-binding enzyme C-terminal domain
Alide2_4157	PF00155	Aminotransferase class I and II
Alide2_4157	PF00392	Bacterial regulatory proteins, gntR family
Alide2_4158	PF00368	Hydroxymethylglutaryl-coenzyme A reductase
Alide2_4159	PF13419	Haloacid dehalogenase-like hydrolase
Alide2_4160	PF00990	GGDEF domain
Alide2_4160	PF08447	PAS fold
Alide2_4161	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
Alide2_4163	PF00563	EAL domain
Alide2_4163	PF00990	GGDEF domain
Alide2_4163	PF07695	Alide2_4163
Alide2_4165	PF13852	Alide2_4165
Alide2_4166	PF04239	Protein of unknown function (DUF421)
Alide2_4167	PF09339	IclR helix-turn-helix domain
Alide2_4168	PF03575	Peptidase family S51
Alide2_4169	PF06675	Alide2_4169
Alide2_4170	PF07302	Alide2_4170
Alide2_4171	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4174	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_4174	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_4174	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_4175	PF00106	short chain dehydrogenase
Alide2_4176	PF00108	Thiolase, N-terminal domain
Alide2_4176	PF02803	Thiolase, C-terminal domain
Alide2_4177	PF06315	Isocitrate dehydrogenase kinase/phosphatase (AceK)
Alide2_4178	PF00484	Carbonic anhydrase
Alide2_4179	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_4179	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_4179	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_4180	PF13411	MerR HTH family regulatory protein
Alide2_4181	PF00005	ABC transporter
Alide2_4181	PF12848	ABC transporter
Alide2_4181	PF16326	Alide2_4181
Alide2_4182	PF00072	Response regulator receiver domain
Alide2_4182	PF01339	CheB methylesterase
Alide2_4183	PF03975	CheD chemotactic sensory transduction
Alide2_4184	PF01739	CheR methyltransferase, SAM binding domain
Alide2_4184	PF03705	CheR methyltransferase, all-alpha domain
Alide2_4185	PF01584	CheW-like domain
Alide2_4186	PF01584	CheW-like domain
Alide2_4186	PF01627	Hpt domain
Alide2_4186	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_4186	PF02895	Signal transducing histidine kinase, homodimeric domain
Alide2_4187	PF00072	Response regulator receiver domain
Alide2_4189	PF00072	Response regulator receiver domain
Alide2_4189	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_4189	PF07730	Histidine kinase
Alide2_4190	PF00072	Response regulator receiver domain
Alide2_4190	PF00196	Bacterial regulatory proteins, luxR family
Alide2_4191	PF01311	Alide2_4191
Alide2_4192	PF01313	Alide2_4192
Alide2_4193	PF00813	Alide2_4193
Alide2_4194	PF04347	Alide2_4194
Alide2_4195	PF01052	Surface presentation of antigens (SPOA)
Alide2_4196	PF01052	Surface presentation of antigens (SPOA)
Alide2_4196	PF02154	Flagellar motor switch protein FliM
Alide2_4197	PF03748	Alide2_4197
Alide2_4198	PF02120	Flagellar hook-length control protein FliK
Alide2_4199	PF02050	Flagellar FliJ protein
Alide2_4200	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
Alide2_4200	PF02874	ATP synthase alpha/beta family, beta-barrel domain
Alide2_4201	PF02108	Alide2_4201
Alide2_4202	PF01706	FliG C-terminal domain
Alide2_4202	PF14841	FliG middle domain
Alide2_4202	PF14842	FliG N-terminal domain
Alide2_4203	PF01514	Secretory protein of YscJ/FliF family
Alide2_4203	PF08345	Alide2_4203
Alide2_4204	PF02049	Alide2_4204
Alide2_4205	PF05400	Flagellar protein FliT
Alide2_4206	PF02561	Flagellar protein FliS
Alide2_4207	PF02465	Alide2_4207
Alide2_4207	PF07195	Alide2_4207
Alide2_4207	PF07196	Flagellin hook IN motif
Alide2_4208	PF00669	Bacterial flagellin N-terminal helical region
Alide2_4208	PF00700	Bacterial flagellin C-terminal helical region
Alide2_4208	PF07196	Flagellin hook IN motif
Alide2_4209	PF00669	Bacterial flagellin N-terminal helical region
Alide2_4209	PF00700	Bacterial flagellin C-terminal helical region
Alide2_4209	PF07196	Flagellin hook IN motif
Alide2_4210	PF00535	Glycosyl transferase family 2
Alide2_4210	PF05159	Alide2_4210
Alide2_4210	PF14307	Alide2_4210
Alide2_4211	PF02348	Cytidylyltransferase
Alide2_4211	PF03737	Demethylmenaquinone methyltransferase
Alide2_4212	PF01618	Alide2_4212
Alide2_4213	PF00691	OmpA family
Alide2_4213	PF13677	Alide2_4213
Alide2_4214	PF00072	Response regulator receiver domain
Alide2_4215	PF04344	Chemotaxis phosphatase, CheZ
Alide2_4216	PF01312	FlhB HrpN YscU SpaS Family
Alide2_4217	PF00771	FHIPEP family
Alide2_4218	PF00448	SRP54-type protein, GTPase domain
Alide2_4220	PF04539	Sigma-70 region 3
Alide2_4220	PF04542	Sigma-70 region 2
Alide2_4220	PF04545	Sigma-70, region 4
Alide2_4222	PF04316	Anti-sigma-28 factor, FlgM
Alide2_4223	PF13144	SAF-like
Alide2_4224	PF00460	Flagella basal body rod protein
Alide2_4225	PF00460	Flagella basal body rod protein
Alide2_4225	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
Alide2_4226	PF03963	Alide2_4226
Alide2_4226	PF13860	FlgD Ig-like domain
Alide2_4226	PF13861	FlgD Tudor-like domain
Alide2_4227	PF00460	Flagella basal body rod protein
Alide2_4227	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
Alide2_4227	PF07559	Flagellar basal body protein FlaE
Alide2_4228	PF00460	Flagella basal body rod protein
Alide2_4228	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
Alide2_4229	PF00460	Flagella basal body rod protein
Alide2_4229	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
Alide2_4230	PF02107	Alide2_4230
Alide2_4231	PF02119	Alide2_4231
Alide2_4232	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
Alide2_4232	PF10135	Alide2_4232
Alide2_4233	PF00460	Flagella basal body rod protein
Alide2_4233	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
Alide2_4234	PF00669	Bacterial flagellin N-terminal helical region
Alide2_4235	PF08668	HDOD domain
Alide2_4236	PF03060	Nitronate monooxygenase
Alide2_4237	PF00155	Aminotransferase class I and II
Alide2_4237	PF00392	Bacterial regulatory proteins, gntR family
Alide2_4238	PF01810	Alide2_4238
Alide2_4239	PF00892	EamA-like transporter family
Alide2_4240	PF00155	Aminotransferase class I and II
Alide2_4241	PF02567	Phenazine biosynthesis-like protein
Alide2_4242	PF00291	Pyridoxal-phosphate dependent enzyme
Alide2_4243	PF04199	Putative cyclase
Alide2_4244	PF13458	Periplasmic binding protein
Alide2_4245	PF01370	NAD dependent epimerase/dehydratase family
Alide2_4246	PF00300	Histidine phosphatase superfamily (branch 1)
Alide2_4247	PF00990	GGDEF domain
Alide2_4248	PF07987	Domain of unkown function (DUF1775)
Alide2_4249	PF00593	TonB dependent receptor
Alide2_4249	PF07715	TonB-dependent Receptor Plug Domain
Alide2_4251	PF02633	Creatinine amidohydrolase
Alide2_4252	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4253	PF02683	Alide2_4253
Alide2_4253	PF11412	Disulphide bond corrector protein DsbC
Alide2_4253	PF13899	Thioredoxin-like
Alide2_4254	PF00578	AhpC/TSA family
Alide2_4255	PF01925	Alide2_4255
Alide2_4256	PF01471	Putative peptidoglycan binding domain
Alide2_4256	PF03734	L,D-transpeptidase catalytic domain
Alide2_4257	PF01208	Uroporphyrinogen decarboxylase (URO-D)
Alide2_4258	PF00270	DEAD/DEAH box helicase
Alide2_4258	PF00271	Helicase conserved C-terminal domain
Alide2_4259	PF00108	Thiolase, N-terminal domain
Alide2_4259	PF02803	Thiolase, C-terminal domain
Alide2_4260	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_4261	PF00501	AMP-binding enzyme
Alide2_4262	PF00005	ABC transporter
Alide2_4263	PF13458	Periplasmic binding protein
Alide2_4264	PF02653	Alide2_4264
Alide2_4265	PF02653	Alide2_4265
Alide2_4266	PF00005	ABC transporter
Alide2_4266	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_4267	PF00440	Bacterial regulatory proteins, tetR family
Alide2_4268	PF03547	Alide2_4268
Alide2_4269	PF00580	UvrD/REP helicase N-terminal domain
Alide2_4269	PF13361	UvrD-like helicase C-terminal domain
Alide2_4271	PF02253	Phospholipase A1
Alide2_4272	PF03781	Sulfatase-modifying factor enzyme 1
Alide2_4273	PF00884	Sulfatase
Alide2_4274	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Alide2_4275	PF01494	FAD binding domain
Alide2_4276	PF01557	Fumarylacetoacetate (FAA) hydrolase family
Alide2_4277	PF13609	Gram-negative porin
Alide2_4278	PF00392	Bacterial regulatory proteins, gntR family
Alide2_4278	PF07729	FCD domain
Alide2_4280	PF00582	Universal stress protein family
Alide2_4281	PF01702	Queuine tRNA-ribosyltransferase
Alide2_4283	PF00989	PAS fold
Alide2_4284	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
Alide2_4285	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4286	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4287	PF03737	Demethylmenaquinone methyltransferase
Alide2_4288	PF00392	Bacterial regulatory proteins, gntR family
Alide2_4288	PF07729	FCD domain
Alide2_4289	PF01553	Acyltransferase
Alide2_4289	PF07690	Major Facilitator Superfamily
Alide2_4290	PF00004	ATPase family associated with various cellular activities (AAA)
Alide2_4290	PF01434	Peptidase family M41
Alide2_4290	PF06480	FtsH Extracellular
Alide2_4291	PF00156	Phosphoribosyl transferase domain
Alide2_4292	PF00156	Phosphoribosyl transferase domain
Alide2_4294	PF08240	Alcohol dehydrogenase GroES-like domain
Alide2_4295	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4296	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
Alide2_4297	PF02627	Carboxymuconolactone decarboxylase family
Alide2_4298	PF08495	Alide2_4298
Alide2_4298	PF10442	Alide2_4298
Alide2_4300	PF00216	Bacterial DNA-binding protein
Alide2_4301	PF13350	Tyrosine phosphatase family
Alide2_4303	PF07804	HipA-like C-terminal domain
Alide2_4303	PF13657	HipA N-terminal domain
Alide2_4304	PF13560	Helix-turn-helix domain
Alide2_4307	PF13358	DDE superfamily endonuclease
Alide2_4307	PF13565	Alide2_4307
Alide2_4309	PF01609	Transposase DDE domain
Alide2_4309	PF13006	Alide2_4309
Alide2_4310	PF13358	DDE superfamily endonuclease
Alide2_4310	PF13551	Winged helix-turn helix
Alide2_4311	PF13557	Alide2_4311
Alide2_4312	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_4313	PF00665	Integrase core domain
Alide2_4313	PF13276	Alide2_4313
Alide2_4314	PF01527	Transposase
Alide2_4315	PF00665	Integrase core domain
Alide2_4316	PF01695	IstB-like ATP binding protein
Alide2_4318	PF00890	FAD binding domain
Alide2_4319	PF06240	Carbon monoxide dehydrogenase subunit G (CoxG)
Alide2_4320	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
Alide2_4320	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
Alide2_4321	PF00111	2Fe-2S iron-sulfur cluster binding domain
Alide2_4321	PF01799	[2Fe-2S] binding domain
Alide2_4322	PF00941	FAD binding domain in molybdopterin dehydrogenase
Alide2_4322	PF03450	CO dehydrogenase flavoprotein C-terminal domain
Alide2_4323	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
Alide2_4324	PF07728	AAA domain (dynein-related subfamily)
Alide2_4326	PF06240	Carbon monoxide dehydrogenase subunit G (CoxG)
Alide2_4327	PF02625	XdhC and CoxI family
Alide2_4327	PF13478	XdhC Rossmann domain
Alide2_4328	PF12804	MobA-like NTP transferase domain
Alide2_4331	PF00440	Bacterial regulatory proteins, tetR family
Alide2_4332	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4333	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
Alide2_4334	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_4334	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_4334	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_4334	PF12806	Alide2_4334
Alide2_4335	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_4335	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
Alide2_4335	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Alide2_4336	PF00108	Thiolase, N-terminal domain
Alide2_4336	PF02803	Thiolase, C-terminal domain
Alide2_4337	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_4338	PF00501	AMP-binding enzyme
Alide2_4338	PF13193	AMP-binding enzyme C-terminal domain
Alide2_4339	PF00005	ABC transporter
Alide2_4340	PF02653	Alide2_4340
Alide2_4341	PF02653	Alide2_4341
Alide2_4342	PF13407	Periplasmic binding protein domain
Alide2_4344	PF01609	Transposase DDE domain
Alide2_4348	PF00589	Phage integrase family
Alide2_4349	PF00589	Phage integrase family
Alide2_4349	PF02899	Phage integrase, N-terminal SAM-like domain
Alide2_4350	PF04986	Alide2_4350
Alide2_4350	PF14319	Alide2_4350
Alide2_4351	PF01196	Ribosomal protein L17
Alide2_4352	PF01000	RNA polymerase Rpb3/RpoA insert domain
Alide2_4352	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
Alide2_4352	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
Alide2_4353	PF00163	Ribosomal protein S4/S9 N-terminal domain
Alide2_4353	PF01479	S4 domain
Alide2_4354	PF00411	Ribosomal protein S11
Alide2_4355	PF00416	Ribosomal protein S13/S18
Alide2_4356	PF00444	Ribosomal protein L36
Alide2_4357	PF00344	SecY translocase
Alide2_4358	PF00828	Ribosomal protein L18e/L15
Alide2_4359	PF00327	Ribosomal protein L30p/L7e
Alide2_4360	PF00333	Ribosomal protein S5, N-terminal domain
Alide2_4360	PF03719	Ribosomal protein S5, C-terminal domain
Alide2_4361	PF00861	Ribosomal L18p/L5e family
Alide2_4362	PF00347	Ribosomal protein L6
Alide2_4363	PF00410	Ribosomal protein S8
Alide2_4364	PF00253	Ribosomal protein S14p/S29e
Alide2_4365	PF00281	Ribosomal protein L5
Alide2_4365	PF00673	ribosomal L5P family C-terminus
Alide2_4366	PF00467	KOW motif
Alide2_4366	PF17136	Alide2_4366
Alide2_4367	PF00238	Ribosomal protein L14p/L23e
Alide2_4368	PF01266	FAD dependent oxidoreductase
Alide2_4368	PF16901	Alide2_4368
Alide2_4369	PF00455	Alide2_4369
Alide2_4369	PF08220	DeoR-like helix-turn-helix domain
Alide2_4370	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
Alide2_4370	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
Alide2_4371	PF03807	NADP oxidoreductase coenzyme F420-dependent
Alide2_4371	PF14748	Pyrroline-5-carboxylate reductase dimerisation
Alide2_4372	PF08757	Alide2_4372
Alide2_4373	PF01040	UbiA prenyltransferase family
Alide2_4375	PF00210	Ferritin-like domain
Alide2_4376	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4376	PF03466	LysR substrate binding domain
Alide2_4377	PF00270	DEAD/DEAH box helicase
Alide2_4377	PF00271	Helicase conserved C-terminal domain
Alide2_4377	PF17191	Alide2_4377
Alide2_4378	PF01966	HD domain
Alide2_4378	PF11871	Alide2_4378
Alide2_4379	PF02547	Queuosine biosynthesis protein
Alide2_4380	PF00892	EamA-like transporter family
Alide2_4381	PF01019	Gamma-glutamyltranspeptidase
Alide2_4382	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4383	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4383	PF03466	LysR substrate binding domain
Alide2_4384	PF03167	Uracil DNA glycosylase superfamily
Alide2_4385	PF00218	Indole-3-glycerol phosphate synthase
Alide2_4387	PF00591	Glycosyl transferase family, a/b domain
Alide2_4387	PF02885	Glycosyl transferase family, helical bundle domain
Alide2_4388	PF00117	Glutamine amidotransferase class-I
Alide2_4389	PF00665	Integrase core domain
Alide2_4389	PF13276	Alide2_4389
Alide2_4390	PF01527	Transposase
Alide2_4392	PF08808	Alide2_4392
Alide2_4393	PF09722	Alide2_4393
Alide2_4394	PF01817	Chorismate mutase type II
Alide2_4395	PF00425	chorismate binding enzyme
Alide2_4395	PF04715	Anthranilate synthase component I, N terminal region
Alide2_4396	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
Alide2_4396	PF00672	HAMP domain
Alide2_4396	PF12729	Alide2_4396
Alide2_4397	PF00563	EAL domain
Alide2_4397	PF00672	HAMP domain
Alide2_4397	PF00989	PAS fold
Alide2_4397	PF00990	GGDEF domain
Alide2_4397	PF13426	PAS domain
Alide2_4397	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
Alide2_4398	PF13419	Haloacid dehalogenase-like hydrolase
Alide2_4400	PF00834	Ribulose-phosphate 3 epimerase family
Alide2_4401	PF04379	Protein of unknown function (DUF525)
Alide2_4402	PF10136	Alide2_4402
Alide2_4403	PF00999	Sodium/hydrogen exchanger family
Alide2_4404	PF04107	Glutamate-cysteine ligase family 2(GCS2)
Alide2_4405	PF00586	AIR synthase related protein, N-terminal domain
Alide2_4405	PF02769	AIR synthase related protein, C-terminal domain
Alide2_4407	PF07963	Prokaryotic N-terminal methylation motif
Alide2_4407	PF16732	Alide2_4407
Alide2_4408	PF07963	Prokaryotic N-terminal methylation motif
Alide2_4408	PF12019	Type II transport protein GspH
Alide2_4410	PF16074	Alide2_4410
Alide2_4412	PF05567	Neisseria PilC beta-propeller domain
Alide2_4413	PF00440	Bacterial regulatory proteins, tetR family
Alide2_4414	PF07167	Alide2_4414
Alide2_4414	PF12551	Alide2_4414
Alide2_4415	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_4416	PF02321	Outer membrane efflux protein
Alide2_4417	PF13437	HlyD family secretion protein
Alide2_4417	PF13533	Biotin-lipoyl like
Alide2_4418	PF00005	ABC transporter
Alide2_4418	PF12698	ABC-2 family transporter protein
Alide2_4419	PF12698	ABC-2 family transporter protein
Alide2_4420	PF01515	Phosphate acetyl/butaryl transferase
Alide2_4420	PF01575	MaoC like domain
Alide2_4421	PF00871	Acetokinase family
Alide2_4422	PF04608	Phosphatidylglycerophosphatase A
Alide2_4423	PF02464	Competence-damaged protein
Alide2_4424	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
Alide2_4424	PF02203	Tar ligand binding domain homologue
Alide2_4425	PF00563	EAL domain
Alide2_4425	PF00672	HAMP domain
Alide2_4425	PF00990	GGDEF domain
Alide2_4425	PF02203	Tar ligand binding domain homologue
Alide2_4426	PF00072	Response regulator receiver domain
Alide2_4426	PF03861	ANTAR domain
Alide2_4427	PF07568	Alide2_4427
Alide2_4427	PF13426	PAS domain
Alide2_4428	PF02810	SEC-C motif
Alide2_4428	PF03695	Uncharacterised protein family (UPF0149)
Alide2_4430	PF13470	Alide2_4430
Alide2_4431	PF01170	Putative RNA methylase family UPF0020
Alide2_4431	PF02926	THUMP domain
Alide2_4432	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
Alide2_4432	PF00672	HAMP domain
Alide2_4432	PF02743	Cache domain
Alide2_4433	PF13279	Thioesterase-like superfamily
Alide2_4434	PF00309	Alide2_4434
Alide2_4434	PF04552	Sigma-54, DNA binding domain
Alide2_4434	PF04963	Sigma-54 factor, core binding domain
Alide2_4435	PF00005	ABC transporter
Alide2_4435	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_4436	PF03968	OstA-like protein
Alide2_4437	PF01323	DSBA-like thioredoxin domain
Alide2_4438	PF05036	Sporulation related domain
Alide2_4439	PF00750	tRNA synthetases class I (R)
Alide2_4439	PF03485	Arginyl tRNA synthetase N terminal domain
Alide2_4439	PF05746	DALR anticodon binding domain
Alide2_4440	PF07769	Alide2_4440
Alide2_4441	PF09980	Alide2_4441
Alide2_4442	PF00375	Sodium:dicarboxylate symporter family
Alide2_4443	PF00072	Response regulator receiver domain
Alide2_4443	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_4443	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_4443	PF02743	Cache domain
Alide2_4443	PF12860	Alide2_4443
Alide2_4444	PF00072	Response regulator receiver domain
Alide2_4444	PF00196	Bacterial regulatory proteins, luxR family
Alide2_4445	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4445	PF03466	LysR substrate binding domain
Alide2_4446	PF01274	Malate synthase
Alide2_4447	PF14375	Alide2_4447
Alide2_4448	PF01361	Tautomerase enzyme
Alide2_4449	PF02596	Alide2_4449
Alide2_4450	PF13230	Glutamine amidotransferases class-II
Alide2_4451	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
Alide2_4451	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
Alide2_4452	PF03594	Alide2_4452
Alide2_4453	PF02705	Alide2_4453
Alide2_4454	PF08886	Glutamate-cysteine ligase
Alide2_4455	PF02386	Cation transport protein
Alide2_4456	PF02080	TrkA-C domain
Alide2_4456	PF02254	TrkA-N domain
Alide2_4457	PF00171	Aldehyde dehydrogenase family
Alide2_4460	PF01400	Astacin (Peptidase family M12A)
Alide2_4462	PF06144	DNA polymerase III, delta subunit
Alide2_4463	PF04390	Lipopolysaccharide-assembly
Alide2_4464	PF00133	tRNA synthetases class I (I, L, M and V)
Alide2_4464	PF08264	Anticodon-binding domain of tRNA
Alide2_4464	PF09334	tRNA synthetases class I (M)
Alide2_4464	PF13603	Leucyl-tRNA synthetase, Domain 2
Alide2_4465	PF00924	Mechanosensitive ion channel
Alide2_4466	PF00171	Aldehyde dehydrogenase family
Alide2_4468	PF00158	Sigma-54 interaction domain
Alide2_4468	PF01590	GAF domain
Alide2_4468	PF02954	Bacterial regulatory protein, Fis family
Alide2_4469	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
Alide2_4470	PF00563	EAL domain
Alide2_4470	PF00989	PAS fold
Alide2_4470	PF00990	GGDEF domain
Alide2_4470	PF13185	GAF domain
Alide2_4471	PF02472	Biopolymer transport protein ExbD/TolR
Alide2_4472	PF01618	Alide2_4472
Alide2_4473	PF01113	Dihydrodipicolinate reductase, N-terminus
Alide2_4473	PF05173	Dihydrodipicolinate reductase, C-terminus
Alide2_4474	PF04355	SmpA / OmlA family
Alide2_4475	PF01475	Ferric uptake regulator family
Alide2_4476	PF02603	HPr Serine kinase N terminus
Alide2_4476	PF07475	HPr Serine kinase C-terminal domain
Alide2_4477	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
Alide2_4478	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
Alide2_4479	PF01259	SAICAR synthetase
Alide2_4480	PF00085	Thioredoxin
Alide2_4480	PF14559	Tetratricopeptide repeat
Alide2_4480	PF14561	Tetratricopeptide repeat
Alide2_4481	PF00731	AIR carboxylase
Alide2_4482	PF02222	ATP-grasp domain
Alide2_4483	PF01300	Telomere recombination
Alide2_4483	PF03481	Putative GTP-binding controlling metal-binding
Alide2_4484	PF00657	GDSL-like Lipase/Acylhydrolase
Alide2_4485	PF03922	OmpW family
Alide2_4487	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
Alide2_4488	PF00814	Glycoprotease family
Alide2_4489	PF00583	Acetyltransferase (GNAT) family
Alide2_4490	PF03167	Uracil DNA glycosylase superfamily
Alide2_4491	PF01544	CorA-like Mg2+ transporter protein
Alide2_4494	PF01048	Phosphorylase superfamily
Alide2_4495	PF00501	AMP-binding enzyme
Alide2_4495	PF13193	AMP-binding enzyme C-terminal domain
Alide2_4496	PF02233	NAD(P) transhydrogenase beta subunit
Alide2_4497	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
Alide2_4497	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
Alide2_4497	PF12769	Domain of unknown function (DUF3814)
Alide2_4499	PF01116	Fructose-bisphosphate aldolase class-II
Alide2_4500	PF00224	Pyruvate kinase, barrel domain
Alide2_4500	PF02887	Pyruvate kinase, alpha/beta domain
Alide2_4501	PF00557	Metallopeptidase family M24
Alide2_4501	PF05195	Aminopeptidase P, N-terminal domain
Alide2_4502	PF00378	Enoyl-CoA hydratase/isomerase family
Alide2_4503	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4504	PF02515	CoA-transferase family III
Alide2_4505	PF02803	Thiolase, C-terminal domain
Alide2_4506	PF01796	Alide2_4506
Alide2_4506	PF12172	Rubredoxin-like zinc ribbon domain (DUF35_N)
Alide2_4507	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4508	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4508	PF03466	LysR substrate binding domain
Alide2_4509	PF12804	MobA-like NTP transferase domain
Alide2_4510	PF00456	Transketolase, thiamine diphosphate binding domain
Alide2_4510	PF02779	Transketolase, pyrimidine binding domain
Alide2_4510	PF02780	Transketolase, C-terminal domain
Alide2_4511	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Alide2_4511	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Alide2_4512	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
Alide2_4513	PF07722	Peptidase C26
Alide2_4514	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4514	PF03466	LysR substrate binding domain
Alide2_4515	PF04909	Amidohydrolase
Alide2_4516	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_4517	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4518	PF02627	Carboxymuconolactone decarboxylase family
Alide2_4520	PF03929	Alide2_4520
Alide2_4521	PF00593	TonB dependent receptor
Alide2_4521	PF07715	TonB-dependent Receptor Plug Domain
Alide2_4523	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4525	PF07287	Alide2_4525
Alide2_4526	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4526	PF03466	LysR substrate binding domain
Alide2_4527	PF06445	GyrI-like small molecule binding domain
Alide2_4528	PF00106	short chain dehydrogenase
Alide2_4530	PF03942	Alide2_4530
Alide2_4531	PF01614	Bacterial transcriptional regulator
Alide2_4531	PF09339	IclR helix-turn-helix domain
Alide2_4532	PF00108	Thiolase, N-terminal domain
Alide2_4533	PF01796	Alide2_4533
Alide2_4533	PF12172	Rubredoxin-like zinc ribbon domain (DUF35_N)
Alide2_4534	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4535	PF13380	CoA binding domain
Alide2_4535	PF13549	ATP-grasp domain
Alide2_4535	PF13607	Succinyl-CoA ligase like flavodoxin domain
Alide2_4536	PF00043	Glutathione S-transferase, C-terminal domain
Alide2_4536	PF02798	Glutathione S-transferase, N-terminal domain
Alide2_4537	PF13561	Enoyl-(Acyl carrier protein) reductase
Alide2_4538	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Alide2_4539	PF01131	DNA topoisomerase
Alide2_4539	PF01751	Toprim domain
Alide2_4539	PF02201	SWIB/MDM2 domain
Alide2_4539	PF13342	Alide2_4539
Alide2_4540	PF00856	SET domain
Alide2_4541	PF02237	Biotin protein ligase C terminal domain
Alide2_4541	PF03099	Biotin/lipoate A/B protein ligase family
Alide2_4543	PF00107	Zinc-binding dehydrogenase
Alide2_4543	PF08240	Alcohol dehydrogenase GroES-like domain
Alide2_4544	PF01575	MaoC like domain
Alide2_4545	PF13452	N-terminal half of MaoC dehydratase
Alide2_4546	PF13458	Periplasmic binding protein
Alide2_4547	PF00501	AMP-binding enzyme
Alide2_4547	PF13193	AMP-binding enzyme C-terminal domain
Alide2_4547	PF16177	Alide2_4547
Alide2_4548	PF12802	MarR family
Alide2_4549	PF09722	Alide2_4549
Alide2_4550	PF08808	Alide2_4550
Alide2_4551	PF02317	NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain
Alide2_4551	PF02558	Ketopantoate reductase PanE/ApbA
Alide2_4552	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4553	PF00512	His Kinase A (phospho-acceptor) domain
Alide2_4553	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_4553	PF08521	Alide2_4553
Alide2_4554	PF00072	Response regulator receiver domain
Alide2_4554	PF00486	Transcriptional regulatory protein, C terminal
Alide2_4555	PF00266	Aminotransferase class-V
Alide2_4556	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_4557	PF00005	ABC transporter
Alide2_4558	PF13343	Bacterial extracellular solute-binding protein
Alide2_4559	PF00392	Bacterial regulatory proteins, gntR family
Alide2_4559	PF07729	FCD domain
Alide2_4560	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
Alide2_4561	PF00171	Aldehyde dehydrogenase family
Alide2_4563	PF01266	FAD dependent oxidoreductase
Alide2_4564	PF00842	Alanine racemase, C-terminal domain
Alide2_4564	PF01168	Alanine racemase, N-terminal domain
Alide2_4565	PF01266	FAD dependent oxidoreductase
Alide2_4566	PF01037	AsnC family
Alide2_4566	PF13412	Winged helix-turn-helix DNA-binding
Alide2_4567	PF13463	Winged helix DNA-binding domain
Alide2_4568	PF00154	recA bacterial DNA recombination protein
Alide2_4569	PF02631	RecX family
Alide2_4570	PF07793	Alide2_4570
Alide2_4571	PF02355	Protein export membrane protein
Alide2_4571	PF07549	SecD/SecF GG Motif
Alide2_4572	PF02355	Protein export membrane protein
Alide2_4572	PF07549	SecD/SecF GG Motif
Alide2_4572	PF13721	SecD export protein N-terminal TM region
Alide2_4573	PF02699	Preprotein translocase subunit
Alide2_4574	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
Alide2_4574	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Alide2_4575	PF01037	AsnC family
Alide2_4575	PF13412	Winged helix-turn-helix DNA-binding
Alide2_4576	PF05977	Transmembrane secretion effector
Alide2_4577	PF03562	MltA specific insert domain
Alide2_4577	PF06725	3D domain
Alide2_4578	PF00691	OmpA family
Alide2_4578	PF13488	Alide2_4578
Alide2_4579	PF00072	Response regulator receiver domain
Alide2_4579	PF00196	Bacterial regulatory proteins, luxR family
Alide2_4580	PF00989	PAS fold
Alide2_4580	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_4581	PF00795	Carbon-nitrogen hydrolase
Alide2_4582	PF13116	Alide2_4582
Alide2_4582	PF13502	Alide2_4582
Alide2_4583	PF03710	Glutamate-ammonia ligase adenylyltransferase
Alide2_4583	PF08335	GlnD PII-uridylyltransferase
Alide2_4584	PF16576	Alide2_4584
Alide2_4585	PF00873	AcrB/AcrD/AcrF family
Alide2_4586	PF13410	Glutathione S-transferase, C-terminal domain
Alide2_4586	PF13417	Glutathione S-transferase, N-terminal domain
Alide2_4587	PF00206	Lyase
Alide2_4587	PF08328	Adenylosuccinate lyase C-terminal
Alide2_4588	PF07152	YaeQ protein
Alide2_4589	PF09413	Domain of unknown function (DUF2007)
Alide2_4590	PF06945	Alide2_4590
Alide2_4590	PF12512	Alide2_4590
Alide2_4591	PF03741	Alide2_4591
Alide2_4593	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4593	PF03466	LysR substrate binding domain
Alide2_4595	PF04020	Alide2_4595
Alide2_4596	PF01435	Peptidase family M48
Alide2_4597	PF01967	MoaC family
Alide2_4598	PF00884	Sulfatase
Alide2_4600	PF00114	Pilin (bacterial filament)
Alide2_4600	PF07963	Prokaryotic N-terminal methylation motif
Alide2_4601	PF12706	Beta-lactamase superfamily domain
Alide2_4602	PF00498	FHA domain
Alide2_4603	PF13672	Protein phosphatase 2C
Alide2_4604	PF03741	Alide2_4604
Alide2_4605	PF00549	CoA-ligase
Alide2_4605	PF02629	CoA binding domain
Alide2_4606	PF00549	CoA-ligase
Alide2_4606	PF08442	ATP-grasp domain
Alide2_4607	PF01118	Semialdehyde dehydrogenase, NAD binding domain
Alide2_4608	PF02481	DNA recombination-mediator protein A
Alide2_4609	PF01476	LysM domain
Alide2_4610	PF01327	Polypeptide deformylase
Alide2_4612	PF00551	Formyl transferase
Alide2_4612	PF02911	Formyl transferase, C-terminal domain
Alide2_4613	PF03591	Alide2_4613
Alide2_4614	PF05437	Alide2_4614
Alide2_4615	PF00162	Phosphoglycerate kinase
Alide2_4618	PF00892	EamA-like transporter family
Alide2_4619	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
Alide2_4620	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4620	PF03466	LysR substrate binding domain
Alide2_4621	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4622	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
Alide2_4623	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
Alide2_4623	PF00672	HAMP domain
Alide2_4623	PF08376	Nitrate and nitrite sensing
Alide2_4624	PF00005	ABC transporter
Alide2_4625	PF07690	Major Facilitator Superfamily
Alide2_4626	PF00436	Single-strand binding protein family
Alide2_4627	PF02652	Alide2_4627
Alide2_4628	PF03054	tRNA methyl transferase
Alide2_4629	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4629	PF03466	LysR substrate binding domain
Alide2_4630	PF04303	PrpF protein
Alide2_4631	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4632	PF13609	Gram-negative porin
Alide2_4633	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4633	PF03466	LysR substrate binding domain
Alide2_4634	PF00890	FAD binding domain
Alide2_4636	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4637	PF00158	Sigma-54 interaction domain
Alide2_4637	PF02954	Bacterial regulatory protein, Fis family
Alide2_4638	PF01039	Carboxyl transferase domain
Alide2_4639	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4640	PF13380	CoA binding domain
Alide2_4640	PF13549	ATP-grasp domain
Alide2_4640	PF13607	Succinyl-CoA ligase like flavodoxin domain
Alide2_4641	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
Alide2_4641	PF02785	Biotin carboxylase C-terminal domain
Alide2_4641	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
Alide2_4642	PF00364	Biotin-requiring enzyme
Alide2_4643	PF03061	Thioesterase superfamily
Alide2_4644	PF00293	NUDIX domain
Alide2_4646	PF00593	TonB dependent receptor
Alide2_4646	PF07715	TonB-dependent Receptor Plug Domain
Alide2_4647	PF03061	Thioesterase superfamily
Alide2_4648	PF01614	Bacterial transcriptional regulator
Alide2_4648	PF09339	IclR helix-turn-helix domain
Alide2_4649	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4650	PF02515	CoA-transferase family III
Alide2_4651	PF13452	N-terminal half of MaoC dehydratase
Alide2_4652	PF00501	AMP-binding enzyme
Alide2_4652	PF13193	AMP-binding enzyme C-terminal domain
Alide2_4653	PF00677	Lumazine binding domain
Alide2_4654	PF01810	Alide2_4654
Alide2_4655	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_4656	PF00072	Response regulator receiver domain
Alide2_4656	PF00486	Transcriptional regulatory protein, C terminal
Alide2_4657	PF03413	Peptidase propeptide and YPEB domain
Alide2_4658	PF13670	Alide2_4658
Alide2_4659	PF01794	Alide2_4659
Alide2_4659	PF08022	Alide2_4659
Alide2_4660	PF01292	Prokaryotic cytochrome b561
Alide2_4661	PF13670	Alide2_4661
Alide2_4662	PF10029	Alide2_4662
Alide2_4663	PF00175	Oxidoreductase NAD-binding domain
Alide2_4663	PF00258	Flavodoxin
Alide2_4663	PF00970	Oxidoreductase FAD-binding domain
Alide2_4663	PF03929	Alide2_4663
Alide2_4664	PF02424	ApbE family
Alide2_4667	PF00122	E1-E2 ATPase
Alide2_4667	PF00689	Cation transporting ATPase, C-terminus
Alide2_4667	PF00690	Cation transporter/ATPase, N-terminus
Alide2_4667	PF00702	haloacid dehalogenase-like hydrolase
Alide2_4670	PF03060	Nitronate monooxygenase
Alide2_4671	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4672	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_4672	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_4672	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_4673	PF01614	Bacterial transcriptional regulator
Alide2_4673	PF09339	IclR helix-turn-helix domain
Alide2_4674	PF02515	CoA-transferase family III
Alide2_4675	PF00107	Zinc-binding dehydrogenase
Alide2_4675	PF08240	Alcohol dehydrogenase GroES-like domain
Alide2_4677	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
Alide2_4677	PF02770	Acyl-CoA dehydrogenase, middle domain
Alide2_4677	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
Alide2_4678	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4679	PF01614	Bacterial transcriptional regulator
Alide2_4679	PF09339	IclR helix-turn-helix domain
Alide2_4680	PF02515	CoA-transferase family III
Alide2_4681	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4681	PF03466	LysR substrate binding domain
Alide2_4682	PF03401	Tripartite tricarboxylate transporter family receptor
Alide2_4683	PF01019	Gamma-glutamyltranspeptidase
Alide2_4685	PF01593	Flavin containing amine oxidoreductase
Alide2_4686	PF01564	Spermine/spermidine synthase
Alide2_4687	PF03994	Alide2_4687
Alide2_4688	PF13785	Alide2_4688
Alide2_4689	PF09851	Alide2_4689
Alide2_4689	PF13421	Alide2_4689
Alide2_4690	PF09834	Alide2_4690
Alide2_4691	PF00460	Flagella basal body rod protein
Alide2_4691	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
Alide2_4692	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4692	PF03466	LysR substrate binding domain
Alide2_4693	PF00202	Aminotransferase class-III
Alide2_4694	PF00171	Aldehyde dehydrogenase family
Alide2_4695	PF00990	GGDEF domain
Alide2_4695	PF05230	Alide2_4695
Alide2_4696	PF00392	Bacterial regulatory proteins, gntR family
Alide2_4696	PF07729	FCD domain
Alide2_4697	PF13458	Periplasmic binding protein
Alide2_4698	PF02653	Alide2_4698
Alide2_4699	PF02653	Alide2_4699
Alide2_4700	PF00005	ABC transporter
Alide2_4700	PF12399	Branched-chain amino acid ATP-binding cassette transporter
Alide2_4701	PF00005	ABC transporter
Alide2_4702	PF01546	Peptidase family M20/M25/M40
Alide2_4702	PF07687	Peptidase dimerisation domain
Alide2_4703	PF07171	MlrC C-terminus
Alide2_4703	PF07364	Protein of unknown function (DUF1485)
Alide2_4704	PF00390	Malic enzyme, N-terminal domain
Alide2_4704	PF01515	Phosphate acetyl/butaryl transferase
Alide2_4704	PF03949	Malic enzyme, NAD binding domain
Alide2_4704	PF12434	Alide2_4704
Alide2_4705	PF00545	ribonuclease
Alide2_4706	PF01337	Barstar (barnase inhibitor)
Alide2_4707	PF00398	Ribosomal RNA adenine dimethylase
Alide2_4708	PF00639	PPIC-type PPIASE domain
Alide2_4708	PF09312	SurA N-terminal domain
Alide2_4709	PF04453	Organic solvent tolerance protein
Alide2_4710	PF01636	Phosphotransferase enzyme family
Alide2_4711	PF04452	RNA methyltransferase
Alide2_4714	PF13555	P-loop containing region of AAA domain
Alide2_4715	PF01546	Peptidase family M20/M25/M40
Alide2_4715	PF07687	Peptidase dimerisation domain
Alide2_4716	PF00990	GGDEF domain
Alide2_4717	PF07021	Methionine biosynthesis protein MetW
Alide2_4718	PF00561	alpha/beta hydrolase fold
Alide2_4719	PF01169	Alide2_4719
Alide2_4720	PF00076	RNA recognition motif
Alide2_4721	PF00076	RNA recognition motif
Alide2_4722	PF00106	short chain dehydrogenase
Alide2_4723	PF06835	Lipopolysaccharide-assembly, LptC-related
Alide2_4724	PF08282	haloacid dehalogenase-like hydrolase
Alide2_4725	PF00571	CBS domain
Alide2_4725	PF01380	SIS domain
Alide2_4726	PF00999	Sodium/hydrogen exchanger family
Alide2_4726	PF02080	TrkA-C domain
Alide2_4726	PF02254	TrkA-N domain
Alide2_4727	PF00156	Phosphoribosyl transferase domain
Alide2_4729	PF00027	Cyclic nucleotide-binding domain
Alide2_4730	PF01926	50S ribosome-binding GTPase
Alide2_4730	PF10396	GTP-binding protein TrmE N-terminus
Alide2_4730	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
Alide2_4731	PF00497	Bacterial extracellular solute-binding proteins, family 3
Alide2_4732	PF01266	FAD dependent oxidoreductase
Alide2_4733	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
Alide2_4733	PF03466	LysR substrate binding domain
Alide2_4734	PF01177	Asp/Glu/Hydantoin racemase
Alide2_4735	PF04951	D-aminopeptidase
Alide2_4736	PF03576	Peptidase family S58
Alide2_4737	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_4737	PF12911	Alide2_4737
Alide2_4738	PF00528	Binding-protein-dependent transport system inner membrane component
Alide2_4739	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
Alide2_4740	PF00005	ABC transporter
Alide2_4740	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
Alide2_4741	PF01112	Asparaginase
Alide2_4742	PF01380	SIS domain
Alide2_4742	PF01418	Helix-turn-helix domain, rpiR family
Alide2_4745	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
Alide2_4746	PF02096	60Kd inner membrane protein
Alide2_4746	PF14849	YidC periplasmic domain
Alide2_4747	PF01809	Alide2_4747
Alide2_4748	PF00825	Ribonuclease P
Alide2_4749	PF00468	Ribosomal protein L34
Alide2_4751	PF10412	Type IV secretion-system coupling protein DNA-binding domain
Alide2_4752	PF11412	Disulphide bond corrector protein DsbC
Alide2_4753	PF08751	TrwC relaxase
Alide2_4753	PF13604	AAA domain
Alide2_4755	PF08348	Alide2_4755
Alide2_4756	PF08827	Domain of unknown function (DUF1805)
Alide2_4757	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Alide2_4757	PF07730	Histidine kinase
Alide2_4758	PF00072	Response regulator receiver domain
Alide2_4758	PF00196	Bacterial regulatory proteins, luxR family
Alide2_4759	PF01464	Transglycosylase SLT domain
Alide2_4762	PF07178	Alide2_4762
Alide2_4763	PF05309	Alide2_4763
Alide2_4764	PF06586	Alide2_4764
Alide2_4765	PF03743	Bacterial conjugation TrbI-like protein
Alide2_4766	PF10411	Disulfide bond isomerase protein N-terminus
Alide2_4766	PF13098	Thioredoxin-like domain
Alide2_4768	PF09676	Alide2_4768
Alide2_4769	PF11130	Alide2_4769
Alide2_4769	PF12846	AAA-like domain
Alide2_4771	PF10502	Signal peptidase, peptidase S26
Alide2_4772	PF12477	Alide2_4772
Alide2_4773	PF06834	Alide2_4773
Alide2_4774	PF09673	Alide2_4774
Alide2_4776	PF06986	Alide2_4776
Alide2_4778	PF13728	F plasmid transfer operon protein
Alide2_4779	PF06122	Alide2_4779
Alide2_4780	PF07916	Alide2_4780
Alide2_4782	PF01435	Peptidase family M48
Alide2_4785	PF01930	Domain of unknown function DUF83
Alide2_4789	PF02661	Fic/DOC family
Alide2_4792	PF06414	Zeta toxin
Alide2_4793	PF06666	Alide2_4793
Alide2_4795	PF00216	Bacterial DNA-binding protein
Alide2_4796	PF00691	OmpA family
Alide2_4797	PF13975	Alide2_4797
Alide2_4799	PF06961	Alide2_4799
Alide2_4800	PF13975	Alide2_4800
Alide2_4804	PF08275	DNA primase catalytic core, N-terminal domain
Alide2_4804	PF13155	Toprim-like
Alide2_4806	PF13614	AAA domain
Alide2_4807	PF02195	ParB-like nuclease domain
Alide2_4807	PF08535	KorB domain
Alide2_4808	PF16509	Alide2_4808
Alide2_4809	PF05973	Alide2_4809
Alide2_4811	PF10134	Alide2_4811
Alide2_4812	PF11740	Alide2_4812
Alide2_4815	PF00145	C-5 cytosine-specific DNA methylase
Alide2_4816	PF13091	PLD-like domain
Alide2_4817	PF02321	Outer membrane efflux protein
Alide2_4818	PF00873	AcrB/AcrD/AcrF family
Alide2_4819	PF13533	Biotin-lipoyl like
Alide2_4820	PF00440	Bacterial regulatory proteins, tetR family
Alide2_4822	PF00436	Single-strand binding protein family
Alide2_4824	PF06067	Alide2_4824
Alide2_4827	PF12083	Alide2_4827
Alide2_4828	PF17383	Alide2_4828
Alide2_4831	PF04002	RadC-like JAB domain
Alide2_4835	PF00239	Resolvase, N terminal domain