locus-tag class description Aaci_0001 PF00308 Bacterial dnaA protein Aaci_0001 PF11638 DnaA N-terminal domain Aaci_0001 PF08299 Bacterial dnaA protein helix-turn-helix Aaci_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Aaci_0002 PF02767 DNA polymerase III beta subunit, central domain Aaci_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Aaci_0004 PF02463 RecF/RecN/SMC N terminal domain Aaci_0005 PF00204 DNA gyrase B Aaci_0005 PF00986 DNA gyrase B subunit, carboxyl terminus Aaci_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0005 PF01751 Toprim domain Aaci_0006 PF00521 DNA gyrase/topoisomerase IV, subunit A Aaci_0006 PF03989 DNA gyrase C-terminal domain, beta-propeller Aaci_0011 PF00571 CBS domain Aaci_0011 PF00478 IMP dehydrogenase / GMP reductase domain Aaci_0012 PF01680 SOR/SNZ family Aaci_0013 PF01174 SNO glutamine amidotransferase family Aaci_0014 PF02403 Seryl-tRNA synthetase N-terminal domain Aaci_0014 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Aaci_0018 PF00565 Staphylococcal nuclease homologue Aaci_0023 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Aaci_0023 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Aaci_0027 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Aaci_0027 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Aaci_0027 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Aaci_0028 PF00463 Isocitrate lyase family Aaci_0033 PF02608 ABC transporter substrate-binding protein PnrA-like Aaci_0034 PF00857 Isochorismatase family Aaci_0035 PF00753 Metallo-beta-lactamase superfamily Aaci_0036 PF03061 Thioesterase superfamily Aaci_0039 PF00005 ABC transporter Aaci_0039 PF08402 TOBE domain Aaci_0042 PF01061 ABC-2 type transporter Aaci_0043 PF13732 Domain of unknown function (DUF4162) Aaci_0043 PF00005 ABC transporter Aaci_0044 PF00072 Response regulator receiver domain Aaci_0044 PF00486 Transcriptional regulatory protein, C terminal Aaci_0045 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0045 PF00989 PAS fold Aaci_0045 PF16736 Single Cache-like Aaci_0045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0047 PF01810 LysE type translocator Aaci_0049 PF00356 Bacterial regulatory proteins, lacI family Aaci_0050 PF04309 Glycerol-3-phosphate responsive antiterminator Aaci_0052 PF07739 TipAS antibiotic-recognition domain Aaci_0052 PF13411 MerR HTH family regulatory protein Aaci_0053 PF01384 Phosphate transporter family Aaci_0054 PF01865 Protein of unknown function DUF47 Aaci_0055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Aaci_0055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Aaci_0056 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Aaci_0056 PF01266 FAD dependent oxidoreductase Aaci_0058 PF00392 Bacterial regulatory proteins, gntR family Aaci_0058 PF07729 FCD domain Aaci_0060 PF03648 Glycosyl hydrolase family 67 N-terminus Aaci_0060 PF07488 Glycosyl hydrolase family 67 middle domain Aaci_0060 PF07477 Glycosyl hydrolase family 67 C-terminus Aaci_0062 PF00474 Sodium:solute symporter family Aaci_0063 PF11755 Protein of unknown function (DUF3311) Aaci_0064 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0064 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0064 PF00989 PAS fold Aaci_0064 PF08447 PAS fold Aaci_0065 PF00535 Glycosyl transferase family 2 Aaci_0066 PF00625 Guanylate kinase Aaci_0067 PF00989 PAS fold Aaci_0067 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0067 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0069 PF00106 short chain dehydrogenase Aaci_0070 PF00265 Thymidine kinase Aaci_0073 PF13091 PLD-like domain Aaci_0073 PF13396 Phospholipase_D-nuclease N-terminal Aaci_0074 PF03009 Glycerophosphoryl diester phosphodiesterase family Aaci_0076 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0077 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0078 PF02073 Thermophilic metalloprotease (M29) Aaci_0080 PF01470 Pyroglutamyl peptidase Aaci_0081 PF00440 Bacterial regulatory proteins, tetR family Aaci_0081 PF17932 Tetracyclin repressor-like, C-terminal domain Aaci_0083 PF13538 UvrD-like helicase C-terminal domain Aaci_0084 PF00300 Histidine phosphatase superfamily (branch 1) Aaci_0085 PF00342 Phosphoglucose isomerase Aaci_0086 PF00480 ROK family Aaci_0091 PF03176 MMPL family Aaci_0094 PF03079 ARD/ARD' family Aaci_0096 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Aaci_0096 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain Aaci_0098 PF00596 Class II Aldolase and Adducin N-terminal domain Aaci_0101 PF13537 Glutamine amidotransferase domain Aaci_0101 PF00733 Asparagine synthase Aaci_0103 PF14437 MafB19-like deaminase Aaci_0104 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0104 PF00989 PAS fold Aaci_0104 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0106 PF12169 DNA polymerase III subunits gamma and tau domain III Aaci_0107 PF02575 YbaB/EbfC DNA-binding family Aaci_0108 PF02132 RecR protein Aaci_0108 PF13662 Toprim domain Aaci_0109 PF01741 Large-conductance mechanosensitive channel, MscL Aaci_0110 PF00392 Bacterial regulatory proteins, gntR family Aaci_0110 PF07729 FCD domain Aaci_0111 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_0112 PF00872 Transposase, Mutator family Aaci_0113 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0116 PF07441 SigmaK-factor processing regulatory protein BofA Aaci_0117 PF01943 Polysaccharide biosynthesis protein Aaci_0117 PF14667 Polysaccharide biosynthesis C-terminal domain Aaci_0120 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Aaci_0120 PF01276 Orn/Lys/Arg decarboxylase, major domain Aaci_0121 PF02223 Thymidylate kinase Aaci_0122 PF06153 Cyclic-di-AMP receptor Aaci_0123 PF09115 DNA polymerase III, delta subunit, C terminal Aaci_0124 PF04468 PSP1 C-terminal conserved region Aaci_0125 PF06156 Initiation control protein YabA Aaci_0126 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Aaci_0127 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Aaci_0127 PF18277 AbrB C-terminal domain Aaci_0128 PF01588 Putative tRNA binding domain Aaci_0128 PF09334 tRNA synthetases class I (M) Aaci_0128 PF08264 Anticodon-binding domain of tRNA Aaci_0129 PF01026 TatD related DNase Aaci_0130 PF13331 Domain of unknown function (DUF4093) Aaci_0130 PF13662 Toprim domain Aaci_0131 PF00398 Ribosomal RNA adenine dimethylase Aaci_0132 PF00005 ABC transporter Aaci_0132 PF12857 TOBE-like domain Aaci_0133 PF00268 Ribonucleotide reductase, small chain Aaci_0139 PF00196 Bacterial regulatory proteins, luxR family Aaci_0139 PF03472 Autoinducer binding domain Aaci_0140 PF00390 Malic enzyme, N-terminal domain Aaci_0140 PF03949 Malic enzyme, NAD binding domain Aaci_0142 PF13193 AMP-binding enzyme C-terminal domain Aaci_0142 PF00501 AMP-binding enzyme Aaci_0143 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_0143 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_0143 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_0144 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_0144 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_0144 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_0145 PF00378 Enoyl-CoA hydratase/isomerase Aaci_0147 PF00108 Thiolase, N-terminal domain Aaci_0147 PF02803 Thiolase, C-terminal domain Aaci_0150 PF03109 ABC1 family Aaci_0152 PF00171 Aldehyde dehydrogenase family Aaci_0153 PF00465 Iron-containing alcohol dehydrogenase Aaci_0155 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_0155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_0155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_0158 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_0158 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_0158 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_0159 PF13193 AMP-binding enzyme C-terminal domain Aaci_0159 PF00501 AMP-binding enzyme Aaci_0160 PF13452 N-terminal half of MaoC dehydratase Aaci_0165 PF00149 Calcineurin-like phosphoesterase Aaci_0168 PF05582 YabG peptidase U57 Aaci_0170 PF06257 Biofilm formation stimulator VEG Aaci_0171 PF00269 Small, acid-soluble spore proteins, alpha/beta type Aaci_0172 PF03575 Peptidase family S51 Aaci_0174 PF08544 GHMP kinases C terminal Aaci_0174 PF00288 GHMP kinases N terminal domain Aaci_0175 PF00156 Phosphoribosyl transferase domain Aaci_0175 PF09182 Bacterial purine repressor, N-terminal Aaci_0176 PF01042 Endoribonuclease L-PSP Aaci_0177 PF04026 SpoVG Aaci_0178 PF00132 Bacterial transferase hexapeptide (six repeats) Aaci_0178 PF00483 Nucleotidyl transferase Aaci_0179 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Aaci_0179 PF14572 Phosphoribosyl synthetase-associated domain Aaci_0180 PF01195 Peptidyl-tRNA hydrolase Aaci_0182 PF17757 UvrB interaction domain Aaci_0182 PF03461 TRCF domain Aaci_0182 PF00271 Helicase conserved C-terminal domain Aaci_0182 PF00270 DEAD/DEAH box helicase Aaci_0182 PF02559 CarD-like/TRCF domain Aaci_0183 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Aaci_0183 PF15714 Stage V sporulation protein T C-terminal, transcription factor Aaci_0185 PF03819 MazG nucleotide pyrophosphohydrolase domain Aaci_0185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Aaci_0186 PF00216 Bacterial DNA-binding protein Aaci_0187 PF01479 S4 domain Aaci_0191 PF00575 S1 RNA binding domain Aaci_0194 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Aaci_0195 PF07228 Stage II sporulation protein E (SpoIIE) Aaci_0196 PF00092 von Willebrand factor type A domain Aaci_0198 PF09179 TilS substrate binding domain Aaci_0198 PF11734 TilS substrate C-terminal domain Aaci_0198 PF01171 PP-loop family Aaci_0200 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_0200 PF17862 AAA+ lid domain Aaci_0200 PF01434 Peptidase family M41 Aaci_0200 PF06480 FtsH Extracellular Aaci_0203 PF00072 Response regulator receiver domain Aaci_0204 PF01430 Hsp33 protein Aaci_0205 PF00809 Pterin binding enzyme Aaci_0206 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Aaci_0207 PF01381 Helix-turn-helix Aaci_0209 PF01336 OB-fold nucleic acid binding domain Aaci_0209 PF00152 tRNA synthetases class II (D, K and N) Aaci_0211 PF05163 DinB family Aaci_0212 PF02673 Bacitracin resistance protein BacA Aaci_0213 PF07690 Major Facilitator Superfamily Aaci_0214 PF00892 EamA-like transporter family Aaci_0217 PF00155 Aminotransferase class I and II Aaci_0218 PF00551 Formyl transferase Aaci_0219 PF08659 KR domain Aaci_0219 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_0219 PF00107 Zinc-binding dehydrogenase Aaci_0219 PF00698 Acyl transferase domain Aaci_0219 PF00550 Phosphopantetheine attachment site Aaci_0219 PF14765 Polyketide synthase dehydratase Aaci_0219 PF02801 Beta-ketoacyl synthase, C-terminal domain Aaci_0219 PF16197 Ketoacyl-synthetase C-terminal extension Aaci_0219 PF00109 Beta-ketoacyl synthase, N-terminal domain Aaci_0220 PF02378 Phosphotransferase system, EIIC Aaci_0220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Aaci_0221 PF08279 HTH domain Aaci_0221 PF05043 Mga helix-turn-helix domain Aaci_0221 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Aaci_0221 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Aaci_0221 PF00874 PRD domain Aaci_0222 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Aaci_0223 PF01232 Mannitol dehydrogenase Rossmann domain Aaci_0223 PF08125 Mannitol dehydrogenase C-terminal domain Aaci_0224 PF00381 PTS HPr component phosphorylation site Aaci_0225 PF05524 PEP-utilising enzyme, N-terminal Aaci_0225 PF02896 PEP-utilising enzyme, TIM barrel domain Aaci_0225 PF00391 PEP-utilising enzyme, mobile domain Aaci_0226 PF04545 Sigma-70, region 4 Aaci_0226 PF04542 Sigma-70 region 2 Aaci_0228 PF01425 Amidase Aaci_0231 PF00005 ABC transporter Aaci_0232 PF00005 ABC transporter Aaci_0233 PF02632 BioY family Aaci_0234 PF03707 Bacterial signalling protein N terminal repeat Aaci_0234 PF00990 Diguanylate cyclase, GGDEF domain Aaci_0234 PF00563 EAL domain Aaci_0237 PF00581 Rhodanese-like domain Aaci_0242 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Aaci_0243 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Aaci_0246 PF01717 Cobalamin-independent synthase, Catalytic domain Aaci_0247 PF00082 Subtilase family Aaci_0247 PF09286 Pro-kumamolisin, activation domain Aaci_0249 PF00486 Transcriptional regulatory protein, C terminal Aaci_0249 PF00072 Response regulator receiver domain Aaci_0250 PF13492 GAF domain Aaci_0250 PF13493 Domain of unknown function (DUF4118) Aaci_0250 PF02702 Osmosensitive K+ channel His kinase sensor domain Aaci_0250 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0251 PF03814 Potassium-transporting ATPase A subunit Aaci_0253 PF02669 K+-transporting ATPase, c chain Aaci_0254 PF02702 Osmosensitive K+ channel His kinase sensor domain Aaci_0255 PF01522 Polysaccharide deacetylase Aaci_0256 PF00248 Aldo/keto reductase family Aaci_0257 PF07690 Major Facilitator Superfamily Aaci_0258 PF01476 LysM domain Aaci_0258 PF00704 Glycosyl hydrolases family 18 Aaci_0259 PF13407 Periplasmic binding protein domain Aaci_0260 PF00005 ABC transporter Aaci_0261 PF02653 Branched-chain amino acid transport system / permease component Aaci_0264 PF00682 HMGL-like Aaci_0264 PF08502 LeuA allosteric (dimerisation) domain Aaci_0265 PF00255 Glutathione peroxidase Aaci_0268 PF09186 Domain of unknown function (DUF1949) Aaci_0268 PF01205 Uncharacterized protein family UPF0029 Aaci_0272 PF02397 Bacterial sugar transferase Aaci_0273 PF13439 Glycosyltransferase Family 4 Aaci_0273 PF00534 Glycosyl transferases group 1 Aaci_0275 PF01061 ABC-2 type transporter Aaci_0276 PF00005 ABC transporter Aaci_0276 PF14524 Wzt C-terminal domain Aaci_0282 PF00149 Calcineurin-like phosphoesterase Aaci_0282 PF12320 Type 5 capsule protein repressor C-terminal domain Aaci_0283 PF13476 AAA domain Aaci_0285 PF00403 Heavy-metal-associated domain Aaci_0286 PF13193 AMP-binding enzyme C-terminal domain Aaci_0286 PF00501 AMP-binding enzyme Aaci_0288 PF04545 Sigma-70, region 4 Aaci_0288 PF04542 Sigma-70 region 2 Aaci_0290 PF00174 Oxidoreductase molybdopterin binding domain Aaci_0291 PF00902 Sec-independent protein translocase protein (TatC) Aaci_0293 PF01225 Mur ligase family, catalytic domain Aaci_0293 PF08245 Mur ligase middle domain Aaci_0293 PF02875 Mur ligase family, glutamate ligase domain Aaci_0294 PF03717 Penicillin-binding Protein dimerisation domain Aaci_0294 PF00905 Penicillin binding protein transpeptidase domain Aaci_0298 PF02261 Aspartate decarboxylase Aaci_0299 PF01842 ACT domain Aaci_0299 PF00742 Homoserine dehydrogenase Aaci_0299 PF03447 Homoserine dehydrogenase, NAD binding domain Aaci_0301 PF00437 Type II/IV secretion system protein Aaci_0301 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Aaci_0302 PF00482 Type II secretion system (T2SS), protein F Aaci_0303 PF08334 Type II secretion system (T2SS), protein G Aaci_0303 PF07963 Prokaryotic N-terminal methylation motif Aaci_0310 PF00437 Type II/IV secretion system protein Aaci_0311 PF01478 Type IV leader peptidase family Aaci_0311 PF06750 Bacterial Peptidase A24 N-terminal domain Aaci_0312 PF00270 DEAD/DEAH box helicase Aaci_0312 PF00271 Helicase conserved C-terminal domain Aaci_0312 PF09369 Domain of unknown function (DUF1998) Aaci_0314 PF00158 Sigma-54 interaction domain Aaci_0314 PF13426 PAS domain Aaci_0314 PF02954 Bacterial regulatory protein, Fis family Aaci_0315 PF00202 Aminotransferase class-III Aaci_0316 PF00171 Aldehyde dehydrogenase family Aaci_0321 PF00491 Arginase family Aaci_0322 PF00202 Aminotransferase class-III Aaci_0323 PF00171 Aldehyde dehydrogenase family Aaci_0324 PF02954 Bacterial regulatory protein, Fis family Aaci_0324 PF00158 Sigma-54 interaction domain Aaci_0324 PF13426 PAS domain Aaci_0325 PF00324 Amino acid permease Aaci_0326 PF00309 Sigma-54 factor, Activator interacting domain (AID) Aaci_0326 PF04963 Sigma-54 factor, core binding domain Aaci_0326 PF04552 Sigma-54, DNA binding domain Aaci_0330 PF17890 Peptidoglycan hydrolase LytB WW-like domain Aaci_0330 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain Aaci_0330 PF01473 Putative cell wall binding repeat Aaci_0330 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Aaci_0334 PF01613 Flavin reductase like domain Aaci_0335 PF07690 Major Facilitator Superfamily Aaci_0336 PF00392 Bacterial regulatory proteins, gntR family Aaci_0337 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aaci_0338 PF00171 Aldehyde dehydrogenase family Aaci_0339 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal Aaci_0339 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal Aaci_0340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aaci_0341 PF00701 Dihydrodipicolinate synthetase family Aaci_0342 PF06628 Catalase-related immune-responsive Aaci_0342 PF00199 Catalase Aaci_0343 PF03176 MMPL family Aaci_0344 PF07301 Protein of unknown function (DUF1453) Aaci_0345 PF00768 D-alanyl-D-alanine carboxypeptidase Aaci_0346 PF00912 Transglycosylase Aaci_0346 PF00905 Penicillin binding protein transpeptidase domain Aaci_0347 PF01050 Mannose-6-phosphate isomerase Aaci_0347 PF00483 Nucleotidyl transferase Aaci_0350 PF01751 Toprim domain Aaci_0351 PF00557 Metallopeptidase family M24 Aaci_0354 PF01648 4'-phosphopantetheinyl transferase superfamily Aaci_0355 PF01256 Carbohydrate kinase Aaci_0355 PF03853 YjeF-related protein N-terminus Aaci_0357 PF01168 Alanine racemase, N-terminal domain Aaci_0357 PF00842 Alanine racemase, C-terminal domain Aaci_0359 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Aaci_0360 PF05221 S-adenosyl-L-homocysteine hydrolase Aaci_0360 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Aaci_0361 PF07722 Peptidase C26 Aaci_0362 PF01966 HD domain Aaci_0362 PF00672 HAMP domain Aaci_0365 PF07293 Protein of unknown function (DUF1450) Aaci_0368 PF00586 AIR synthase related protein, N-terminal domain Aaci_0368 PF02769 AIR synthase related protein, C-terminal domain Aaci_0369 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Aaci_0370 PF00814 Glycoprotease family Aaci_0371 PF00583 Acetyltransferase (GNAT) family Aaci_0372 PF00814 Glycoprotease family Aaci_0373 PF00005 ABC transporter Aaci_0373 PF16326 ABC transporter C-terminal domain Aaci_0373 PF12848 ABC transporter Aaci_0374 PF01569 PAP2 superfamily Aaci_0375 PF01812 5-formyltetrahydrofolate cyclo-ligase family Aaci_0377 PF18146 Damage-inducible protein CinA KH domain Aaci_0377 PF00994 Probable molybdopterin binding domain Aaci_0377 PF02464 Competence-damaged protein Aaci_0378 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Aaci_0379 PF00166 Chaperonin 10 Kd subunit Aaci_0380 PF00118 TCP-1/cpn60 chaperonin family Aaci_0383 PF00753 Metallo-beta-lactamase superfamily Aaci_0384 PF07730 Histidine kinase Aaci_0384 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0385 PF00196 Bacterial regulatory proteins, luxR family Aaci_0385 PF00072 Response regulator receiver domain Aaci_0387 PF07726 ATPase family associated with various cellular activities (AAA) Aaci_0387 PF17863 AAA lid domain Aaci_0389 PF13559 Domain of unknown function (DUF4129) Aaci_0389 PF11992 Domain of unknown function (DUF3488) Aaci_0389 PF01841 Transglutaminase-like superfamily Aaci_0390 PF16123 Hydroxyacylglutathione hydrolase C-terminus Aaci_0390 PF00753 Metallo-beta-lactamase superfamily Aaci_0392 PF02540 NAD synthase Aaci_0392 PF00958 GMP synthase C terminal domain Aaci_0392 PF00117 Glutamine amidotransferase class-I Aaci_0393 PF00206 Lyase Aaci_0393 PF10397 Adenylosuccinate lyase C-terminus Aaci_0394 PF01259 SAICAR synthetase Aaci_0395 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Aaci_0397 PF00586 AIR synthase related protein, N-terminal domain Aaci_0397 PF02769 AIR synthase related protein, C-terminal domain Aaci_0397 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Aaci_0398 PF00156 Phosphoribosyl transferase domain Aaci_0399 PF00586 AIR synthase related protein, N-terminal domain Aaci_0399 PF02769 AIR synthase related protein, C-terminal domain Aaci_0400 PF02142 MGS-like domain Aaci_0400 PF01808 AICARFT/IMPCHase bienzyme Aaci_0401 PF02844 Phosphoribosylglycinamide synthetase, N domain Aaci_0401 PF02843 Phosphoribosylglycinamide synthetase, C domain Aaci_0401 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Aaci_0403 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_0404 PF13378 Enolase C-terminal domain-like Aaci_0404 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Aaci_0405 PF00005 ABC transporter Aaci_0406 PF18075 FtsX extracellular domain Aaci_0406 PF02687 FtsX-like permease family Aaci_0407 PF17820 PDZ domain Aaci_0408 PF01618 MotA/TolQ/ExbB proton channel family Aaci_0409 PF13677 Membrane MotB of proton-channel complex MotA/MotB Aaci_0409 PF00691 OmpA family Aaci_0410 PF04851 Type III restriction enzyme, res subunit Aaci_0410 PF02151 UvrB/uvrC motif Aaci_0410 PF00271 Helicase conserved C-terminal domain Aaci_0410 PF12344 Ultra-violet resistance protein B Aaci_0410 PF17757 UvrB interaction domain Aaci_0411 PF17755 UvrA DNA-binding domain Aaci_0411 PF00005 ABC transporter Aaci_0411 PF17760 UvrA interaction domain Aaci_0412 PF02603 HPr Serine kinase N terminus Aaci_0412 PF07475 HPr Serine kinase C-terminal domain Aaci_0413 PF03485 Arginyl tRNA synthetase N terminal domain Aaci_0413 PF00750 tRNA synthetases class I (R) Aaci_0413 PF05746 DALR anticodon binding domain Aaci_0415 PF00300 Histidine phosphatase superfamily (branch 1) Aaci_0415 PF00293 NUDIX domain Aaci_0416 PF03668 P-loop ATPase protein family Aaci_0417 PF01933 Uncharacterised protein family UPF0052 Aaci_0418 PF10298 WhiA N-terminal LAGLIDADG-like domain Aaci_0418 PF14527 WhiA LAGLIDADG-like domain Aaci_0418 PF02650 WhiA C-terminal HTH domain Aaci_0419 PF00381 PTS HPr component phosphorylation site Aaci_0423 PF14815 NUDIX domain Aaci_0423 PF00730 HhH-GPD superfamily base excision DNA repair protein Aaci_0423 PF00633 Helix-hairpin-helix motif Aaci_0424 PF01027 Inhibitor of apoptosis-promoting Bax1 Aaci_0425 PF09334 tRNA synthetases class I (M) Aaci_0425 PF00133 tRNA synthetases class I (I, L, M and V) Aaci_0425 PF08264 Anticodon-binding domain of tRNA Aaci_0425 PF13603 Leucyl-tRNA synthetase, Domain 2 Aaci_0426 PF00392 Bacterial regulatory proteins, gntR family Aaci_0426 PF07729 FCD domain Aaci_0429 PF01594 AI-2E family transporter Aaci_0432 PF00271 Helicase conserved C-terminal domain Aaci_0432 PF09369 Domain of unknown function (DUF1998) Aaci_0432 PF00270 DEAD/DEAH box helicase Aaci_0434 PF06335 Protein of unknown function (DUF1054) Aaci_0435 PF00149 Calcineurin-like phosphoesterase Aaci_0435 PF02872 5'-nucleotidase, C-terminal domain Aaci_0436 PF00730 HhH-GPD superfamily base excision DNA repair protein Aaci_0436 PF00633 Helix-hairpin-helix motif Aaci_0436 PF10576 Iron-sulfur binding domain of endonuclease III Aaci_0438 PF03323 Bacillus/Clostridium GerA spore germination protein Aaci_0441 PF00465 Iron-containing alcohol dehydrogenase Aaci_0442 PF00171 Aldehyde dehydrogenase family Aaci_0443 PF07690 Major Facilitator Superfamily Aaci_0444 PF02954 Bacterial regulatory protein, Fis family Aaci_0444 PF13426 PAS domain Aaci_0444 PF00158 Sigma-54 interaction domain Aaci_0445 PF00501 AMP-binding enzyme Aaci_0445 PF13193 AMP-binding enzyme C-terminal domain Aaci_0446 PF00075 RNase H Aaci_0447 PF08331 Domain of unknown function (DUF1730) Aaci_0448 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Aaci_0448 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Aaci_0450 PF00180 Isocitrate/isopropylmalate dehydrogenase Aaci_0451 PF09339 IclR helix-turn-helix domain Aaci_0451 PF01614 Bacterial transcriptional regulator Aaci_0452 PF12671 Putative amidase domain Aaci_0453 PF00588 SpoU rRNA Methylase family Aaci_0454 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Aaci_0454 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_0455 PF00364 Biotin-requiring enzyme Aaci_0455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Aaci_0455 PF02817 e3 binding domain Aaci_0456 PF02780 Transketolase, C-terminal domain Aaci_0456 PF02779 Transketolase, pyrimidine binding domain Aaci_0457 PF00676 Dehydrogenase E1 component Aaci_0459 PF00135 Carboxylesterase family Aaci_0460 PF08298 PrkA AAA domain Aaci_0460 PF06798 PrkA serine protein kinase C-terminal domain Aaci_0461 PF04285 Protein of unknown function (DUF444) Aaci_0463 PF07508 Recombinase Aaci_0463 PF00239 Resolvase, N terminal domain Aaci_0463 PF13408 Recombinase zinc beta ribbon domain Aaci_0465 PF01381 Helix-turn-helix Aaci_0471 PF01381 Helix-turn-helix Aaci_0484 PF02768 DNA polymerase III beta subunit, C-terminal domain Aaci_0484 PF02767 DNA polymerase III beta subunit, central domain Aaci_0484 PF00712 DNA polymerase III beta subunit, N-terminal domain Aaci_0496 PF02224 Cytidylate kinase Aaci_0498 PF00929 Exonuclease Aaci_0506 PF01695 IstB-like ATP binding protein Aaci_0508 PF00872 Transposase, Mutator family Aaci_0511 PF06481 COX Aromatic Rich Motif Aaci_0511 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Aaci_0512 PF00115 Cytochrome C and Quinol oxidase polypeptide I Aaci_0513 PF00510 Cytochrome c oxidase subunit III Aaci_0514 PF03626 Prokaryotic Cytochrome C oxidase subunit IV Aaci_0515 PF13426 PAS domain Aaci_0515 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0515 PF00989 PAS fold Aaci_0515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0515 PF13188 PAS domain Aaci_0516 PF00072 Response regulator receiver domain Aaci_0516 PF00196 Bacterial regulatory proteins, luxR family Aaci_0520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Aaci_0520 PF00056 lactate/malate dehydrogenase, NAD binding domain Aaci_0526 PF11849 Domain of unknown function (DUF3369) Aaci_0527 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aaci_0527 PF00672 HAMP domain Aaci_0528 PF00582 Universal stress protein family Aaci_0535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aaci_0536 PF02040 Arsenical pump membrane protein Aaci_0537 PF01451 Low molecular weight phosphotyrosine protein phosphatase Aaci_0538 PF00583 Acetyltransferase (GNAT) family Aaci_0539 PF02086 D12 class N6 adenine-specific DNA methyltransferase Aaci_0544 PF04542 Sigma-70 region 2 Aaci_0544 PF08281 Sigma-70, region 4 Aaci_0578 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Aaci_0580 PF00437 Type II/IV secretion system protein Aaci_0601 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Aaci_0602 PF01850 PIN domain Aaci_0618 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Aaci_0618 PF18277 AbrB C-terminal domain Aaci_0620 PF03466 LysR substrate binding domain Aaci_0620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aaci_0625 PF04293 SpoVR like protein Aaci_0633 PF03458 UPF0126 domain Aaci_0635 PF00563 EAL domain Aaci_0635 PF00672 HAMP domain Aaci_0635 PF00990 Diguanylate cyclase, GGDEF domain Aaci_0635 PF17154 Gammaproteobacterial periplasmic sensor domain Aaci_0640 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Aaci_0641 PF00873 AcrB/AcrD/AcrF family Aaci_0643 PF00005 ABC transporter Aaci_0645 PF00005 ABC transporter Aaci_0646 PF00392 Bacterial regulatory proteins, gntR family Aaci_0647 PF12706 Beta-lactamase superfamily domain Aaci_0647 PF00753 Metallo-beta-lactamase superfamily Aaci_0648 PF07690 Major Facilitator Superfamily Aaci_0649 PF01047 MarR family Aaci_0650 PF03471 Transporter associated domain Aaci_0650 PF00999 Sodium/hydrogen exchanger family Aaci_0650 PF02080 TrkA-C domain Aaci_0652 PF00005 ABC transporter Aaci_0654 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0654 PF07730 Histidine kinase Aaci_0655 PF00072 Response regulator receiver domain Aaci_0655 PF00196 Bacterial regulatory proteins, luxR family Aaci_0658 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Aaci_0659 PF00115 Cytochrome C and Quinol oxidase polypeptide I Aaci_0660 PF00510 Cytochrome c oxidase subunit III Aaci_0661 PF03626 Prokaryotic Cytochrome C oxidase subunit IV Aaci_0662 PF02628 Cytochrome oxidase assembly protein Aaci_0663 PF07943 Penicillin-binding protein 5, C-terminal domain Aaci_0663 PF00768 D-alanyl-D-alanine carboxypeptidase Aaci_0664 PF01596 O-methyltransferase Aaci_0667 PF00248 Aldo/keto reductase family Aaci_0668 PF00465 Iron-containing alcohol dehydrogenase Aaci_0673 PF01339 CheB methylesterase Aaci_0673 PF01739 CheR methyltransferase, SAM binding domain Aaci_0673 PF03705 CheR methyltransferase, all-alpha domain Aaci_0673 PF08448 PAS fold Aaci_0679 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Aaci_0680 PF13302 Acetyltransferase (GNAT) domain Aaci_0682 PF00580 UvrD/REP helicase N-terminal domain Aaci_0682 PF13361 UvrD-like helicase C-terminal domain Aaci_0683 PF12826 Helix-hairpin-helix motif Aaci_0683 PF01653 NAD-dependent DNA ligase adenylation domain Aaci_0683 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Aaci_0683 PF00533 BRCA1 C Terminus (BRCT) domain Aaci_0683 PF03120 NAD-dependent DNA ligase OB-fold domain Aaci_0687 PF02686 Glu-tRNAGln amidotransferase C subunit Aaci_0688 PF01425 Amidase Aaci_0689 PF02934 GatB/GatE catalytic domain Aaci_0689 PF02637 GatB domain Aaci_0690 PF05958 tRNA (Uracil-5-)-methyltransferase Aaci_0690 PF01938 TRAM domain Aaci_0691 PF12146 Serine aminopeptidase, S33 Aaci_0691 PF13026 Protein of unknown function (DUF3887) Aaci_0695 PF00072 Response regulator receiver domain Aaci_0695 PF00486 Transcriptional regulatory protein, C terminal Aaci_0698 PF00498 FHA domain Aaci_0698 PF00005 ABC transporter Aaci_0698 PF01061 ABC-2 type transporter Aaci_0702 PF00999 Sodium/hydrogen exchanger family Aaci_0703 PF00210 Ferritin-like domain Aaci_0704 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Aaci_0704 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Aaci_0705 PF00596 Class II Aldolase and Adducin N-terminal domain Aaci_0706 PF01261 Xylose isomerase-like TIM barrel Aaci_0708 PF00005 ABC transporter Aaci_0709 PF02653 Branched-chain amino acid transport system / permease component Aaci_0710 PF02653 Branched-chain amino acid transport system / permease component Aaci_0711 PF13407 Periplasmic binding protein domain Aaci_0712 PF00455 DeoR C terminal sensor domain Aaci_0712 PF08220 DeoR-like helix-turn-helix domain Aaci_0716 PF02589 LUD domain Aaci_0716 PF13183 4Fe-4S dicluster domain Aaci_0716 PF11870 Domain of unknown function (DUF3390) Aaci_0717 PF02754 Cysteine-rich domain Aaci_0719 PF04239 Protein of unknown function (DUF421) Aaci_0720 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Aaci_0721 PF07451 Stage V sporulation protein AD (SpoVAD) Aaci_0722 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Aaci_0723 PF01757 Acyltransferase family Aaci_0724 PF02615 Malate/L-lactate dehydrogenase Aaci_0728 PF00501 AMP-binding enzyme Aaci_0728 PF13193 AMP-binding enzyme C-terminal domain Aaci_0729 PF00639 PPIC-type PPIASE domain Aaci_0730 PF00083 Sugar (and other) transporter Aaci_0731 PF04070 Domain of unknown function (DUF378) Aaci_0732 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Aaci_0732 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Aaci_0733 PF05683 Fumarase C-terminus Aaci_0733 PF05681 Fumarate hydratase (Fumerase) Aaci_0735 PF01566 Natural resistance-associated macrophage protein Aaci_0737 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Aaci_0737 PF00591 Glycosyl transferase family, a/b domain Aaci_0737 PF02885 Glycosyl transferase family, helical bundle domain Aaci_0738 PF08439 Oligopeptidase F Aaci_0738 PF01432 Peptidase family M3 Aaci_0739 PF13188 PAS domain Aaci_0739 PF00989 PAS fold Aaci_0739 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0739 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0739 PF13426 PAS domain Aaci_0740 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Aaci_0740 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Aaci_0740 PF01488 Shikimate / quinate 5-dehydrogenase Aaci_0741 PF00162 Phosphoglycerate kinase Aaci_0742 PF00121 Triosephosphate isomerase Aaci_0743 PF01676 Metalloenzyme superfamily Aaci_0743 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Aaci_0744 PF00113 Enolase, C-terminal TIM barrel domain Aaci_0744 PF03952 Enolase, N-terminal domain Aaci_0745 PF03840 Preprotein translocase SecG subunit Aaci_0746 PF07690 Major Facilitator Superfamily Aaci_0747 PF08206 Ribonuclease B OB domain Aaci_0747 PF00773 RNB domain Aaci_0747 PF00575 S1 RNA binding domain Aaci_0747 PF17876 Cold shock domain Aaci_0748 PF01668 SmpB protein Aaci_0749 PF00171 Aldehyde dehydrogenase family Aaci_0750 PF10057 Uncharacterized conserved protein (DUF2294) Aaci_0751 PF00361 Proton-conducting membrane transporter Aaci_0751 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Aaci_0752 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) Aaci_0754 PF00534 Glycosyl transferases group 1 Aaci_0758 PF08241 Methyltransferase domain Aaci_0760 PF08267 Cobalamin-independent synthase, N-terminal domain Aaci_0760 PF01717 Cobalamin-independent synthase, Catalytic domain Aaci_0761 PF00296 Luciferase-like monooxygenase Aaci_0762 PF01613 Flavin reductase like domain Aaci_0765 PF09347 Domain of unknown function (DUF1989) Aaci_0766 PF02785 Biotin carboxylase C-terminal domain Aaci_0766 PF00289 Biotin carboxylase, N-terminal domain Aaci_0766 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Aaci_0767 PF01425 Amidase Aaci_0768 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0769 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0770 PF01547 Bacterial extracellular solute-binding protein Aaci_0774 PF03069 Acetamidase/Formamidase family Aaci_0778 PF10502 Signal peptidase, peptidase S26 Aaci_0779 PF00248 Aldo/keto reductase family Aaci_0780 PF03144 Elongation factor Tu domain 2 Aaci_0780 PF16658 Class II release factor RF3, C-terminal domain Aaci_0780 PF00009 Elongation factor Tu GTP binding domain Aaci_0785 PF01370 NAD dependent epimerase/dehydratase family Aaci_0786 PF16875 Glycosyl hydrolase family 36 N-terminal domain Aaci_0786 PF16874 Glycosyl hydrolase family 36 C-terminal domain Aaci_0787 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Aaci_0787 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Aaci_0791 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain Aaci_0791 PF10091 Putative glucoamylase Aaci_0791 PF06165 Glycosyltransferase family 36 Aaci_0792 PF00083 Sugar (and other) transporter Aaci_0794 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0796 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0797 PF02056 Family 4 glycosyl hydrolase Aaci_0797 PF11975 Family 4 glycosyl hydrolase C-terminal domain Aaci_0798 PF00285 Citrate synthase, C-terminal domain Aaci_0799 PF03972 MmgE/PrpD family Aaci_0801 PF00291 Pyridoxal-phosphate dependent enzyme Aaci_0801 PF13291 ACT domain Aaci_0804 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_0804 PF07724 AAA domain (Cdc48 subfamily) Aaci_0804 PF17871 AAA lid domain Aaci_0804 PF10431 C-terminal, D2-small domain, of ClpB protein Aaci_0806 PF00440 Bacterial regulatory proteins, tetR family Aaci_0806 PF17932 Tetracyclin repressor-like, C-terminal domain Aaci_0807 PF05138 Phenylacetic acid catabolic protein Aaci_0810 PF01883 Iron-sulfur cluster assembly protein Aaci_0811 PF14535 AMP-binding enzyme C-terminal domain Aaci_0811 PF00501 AMP-binding enzyme Aaci_0814 PF00171 Aldehyde dehydrogenase family Aaci_0815 PF00378 Enoyl-CoA hydratase/isomerase Aaci_0816 PF00108 Thiolase, N-terminal domain Aaci_0816 PF02803 Thiolase, C-terminal domain Aaci_0817 PF02646 RmuC family Aaci_0818 PF14168 YjzC-like protein Aaci_0819 PF04172 LrgB-like family Aaci_0820 PF03788 LrgA family Aaci_0821 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aaci_0821 PF03466 LysR substrate binding domain Aaci_0823 PF04299 Putative FMN-binding domain Aaci_0824 PF00155 Aminotransferase class I and II Aaci_0825 PF00676 Dehydrogenase E1 component Aaci_0826 PF02779 Transketolase, pyrimidine binding domain Aaci_0826 PF02780 Transketolase, C-terminal domain Aaci_0827 PF02817 e3 binding domain Aaci_0827 PF00364 Biotin-requiring enzyme Aaci_0827 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Aaci_0828 PF00378 Enoyl-CoA hydratase/isomerase Aaci_0829 PF00892 EamA-like transporter family Aaci_0830 PF05977 Transmembrane secretion effector Aaci_0831 PF00107 Zinc-binding dehydrogenase Aaci_0831 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_0833 PF00664 ABC transporter transmembrane region Aaci_0833 PF00005 ABC transporter Aaci_0834 PF00005 ABC transporter Aaci_0834 PF00664 ABC transporter transmembrane region Aaci_0835 PF00107 Zinc-binding dehydrogenase Aaci_0835 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_0836 PF00326 Prolyl oligopeptidase family Aaci_0836 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Aaci_0837 PF00664 ABC transporter transmembrane region Aaci_0837 PF00005 ABC transporter Aaci_0838 PF00664 ABC transporter transmembrane region Aaci_0838 PF00005 ABC transporter Aaci_0841 PF10057 Uncharacterized conserved protein (DUF2294) Aaci_0842 PF01226 Formate/nitrite transporter Aaci_0843 PF01568 Molydopterin dinucleotide binding domain Aaci_0843 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Aaci_0843 PF12838 4Fe-4S dicluster domain Aaci_0843 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Aaci_0843 PF00384 Molybdopterin oxidoreductase Aaci_0845 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_0848 PF00248 Aldo/keto reductase family Aaci_0849 PF08502 LeuA allosteric (dimerisation) domain Aaci_0849 PF00682 HMGL-like Aaci_0850 PF07690 Major Facilitator Superfamily Aaci_0857 PF00958 GMP synthase C terminal domain Aaci_0857 PF03352 Methyladenine glycosylase Aaci_0857 PF13302 Acetyltransferase (GNAT) domain Aaci_0857 PF13673 Acetyltransferase (GNAT) domain Aaci_0857 PF00117 Glutamine amidotransferase class-I Aaci_0858 PF00085 Thioredoxin Aaci_0859 PF01625 Peptide methionine sulfoxide reductase Aaci_0860 PF00005 ABC transporter Aaci_0861 PF04264 YceI-like domain Aaci_0862 PF01638 HxlR-like helix-turn-helix Aaci_0863 PF01979 Amidohydrolase family Aaci_0864 PF14306 PUA-like domain Aaci_0864 PF01747 ATP-sulfurylase Aaci_0865 PF01047 MarR family Aaci_0867 PF00749 tRNA synthetases class I (E and Q), catalytic domain Aaci_0868 PF00171 Aldehyde dehydrogenase family Aaci_0869 PF00248 Aldo/keto reductase family Aaci_0870 PF02390 Putative methyltransferase Aaci_0871 PF00857 Isochorismatase family Aaci_0874 PF07690 Major Facilitator Superfamily Aaci_0875 PF13538 UvrD-like helicase C-terminal domain Aaci_0876 PF12833 Helix-turn-helix domain Aaci_0877 PF07690 Major Facilitator Superfamily Aaci_0878 PF13673 Acetyltransferase (GNAT) domain Aaci_0880 PF08830 Protein of unknown function (DUF1806) Aaci_0881 PF02585 GlcNAc-PI de-N-acetylase Aaci_0882 PF01451 Low molecular weight phosphotyrosine protein phosphatase Aaci_0885 PF00085 Thioredoxin Aaci_0886 PF13607 Succinyl-CoA ligase like flavodoxin domain Aaci_0886 PF13380 CoA binding domain Aaci_0886 PF00583 Acetyltransferase (GNAT) family Aaci_0887 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_0889 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Aaci_0890 PF08220 DeoR-like helix-turn-helix domain Aaci_0890 PF00455 DeoR C terminal sensor domain Aaci_0891 PF00294 pfkB family carbohydrate kinase Aaci_0892 PF02378 Phosphotransferase system, EIIC Aaci_0892 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Aaci_0894 PF01425 Amidase Aaci_0895 PF04241 Protein of unknown function (DUF423) Aaci_0896 PF00892 EamA-like transporter family Aaci_0897 PF00326 Prolyl oligopeptidase family Aaci_0898 PF08818 Domain of unknown function (DU1801) Aaci_0900 PF01053 Cys/Met metabolism PLP-dependent enzyme Aaci_0902 PF00676 Dehydrogenase E1 component Aaci_0903 PF02779 Transketolase, pyrimidine binding domain Aaci_0903 PF02780 Transketolase, C-terminal domain Aaci_0904 PF00501 AMP-binding enzyme Aaci_0904 PF13193 AMP-binding enzyme C-terminal domain Aaci_0905 PF01070 FMN-dependent dehydrogenase Aaci_0906 PF02545 Maf-like protein Aaci_0910 PF00465 Iron-containing alcohol dehydrogenase Aaci_0911 PF00356 Bacterial regulatory proteins, lacI family Aaci_0914 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0915 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0916 PF00330 Aconitase family (aconitate hydratase) Aaci_0916 PF00694 Aconitase C-terminal domain Aaci_0917 PF00953 Glycosyl transferase family 4 Aaci_0919 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_0919 PF00107 Zinc-binding dehydrogenase Aaci_0920 PF00107 Zinc-binding dehydrogenase Aaci_0920 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_0921 PF04551 GcpE protein Aaci_0922 PF04972 BON domain Aaci_0922 PF01476 LysM domain Aaci_0923 PF13393 Histidyl-tRNA synthetase Aaci_0924 PF01634 ATP phosphoribosyltransferase Aaci_0925 PF00815 Histidinol dehydrogenase Aaci_0926 PF00475 Imidazoleglycerol-phosphate dehydratase Aaci_0927 PF00117 Glutamine amidotransferase class-I Aaci_0928 PF00977 Histidine biosynthesis protein Aaci_0929 PF00977 Histidine biosynthesis protein Aaci_0930 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Aaci_0930 PF01502 Phosphoribosyl-AMP cyclohydrolase Aaci_0933 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_0933 PF00107 Zinc-binding dehydrogenase Aaci_0934 PF13520 Amino acid permease Aaci_0936 PF01872 RibD C-terminal domain Aaci_0936 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Aaci_0937 PF00677 Lumazine binding domain Aaci_0938 PF00925 GTP cyclohydrolase II Aaci_0938 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Aaci_0939 PF00885 6,7-dimethyl-8-ribityllumazine synthase Aaci_0940 PF00313 'Cold-shock' DNA-binding domain Aaci_0944 PF09819 ABC-type cobalt transport system, permease component Aaci_0945 PF00005 ABC transporter Aaci_0946 PF00456 Transketolase, thiamine diphosphate binding domain Aaci_0946 PF02780 Transketolase, C-terminal domain Aaci_0946 PF02779 Transketolase, pyrimidine binding domain Aaci_0947 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aaci_0947 PF03466 LysR substrate binding domain Aaci_0951 PF00106 short chain dehydrogenase Aaci_0952 PF00581 Rhodanese-like domain Aaci_0954 PF02585 GlcNAc-PI de-N-acetylase Aaci_0955 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Aaci_0955 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_0955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_0957 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Aaci_0959 PF00580 UvrD/REP helicase N-terminal domain Aaci_0959 PF13361 UvrD-like helicase C-terminal domain Aaci_0963 PF00849 RNA pseudouridylate synthase Aaci_0963 PF01479 S4 domain Aaci_0964 PF03631 Virulence factor BrkB Aaci_0965 PF02152 Dihydroneopterin aldolase Aaci_0966 PF10776 Protein of unknown function (DUF2600) Aaci_0968 PF01926 50S ribosome-binding GTPase Aaci_0968 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Aaci_0969 PF00350 Dynamin family Aaci_0970 PF13180 PDZ domain Aaci_0972 PF09335 SNARE associated Golgi protein Aaci_0974 PF02796 Helix-turn-helix domain of resolvase Aaci_0974 PF00239 Resolvase, N terminal domain Aaci_0977 PF01227 GTP cyclohydrolase I Aaci_0979 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Aaci_0979 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Aaci_0981 PF01180 Dihydroorotate dehydrogenase Aaci_0982 PF04542 Sigma-70 region 2 Aaci_0982 PF08281 Sigma-70, region 4 Aaci_0984 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Aaci_0984 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Aaci_0985 PF01883 Iron-sulfur cluster assembly protein Aaci_0986 PF00005 ABC transporter Aaci_0987 PF01458 Uncharacterized protein family (UPF0051) Aaci_0988 PF00266 Aminotransferase class-V Aaci_0989 PF01592 NifU-like N terminal domain Aaci_0990 PF01458 Uncharacterized protein family (UPF0051) Aaci_0991 PF00355 Rieske [2Fe-2S] domain Aaci_0992 PF02082 Transcriptional regulator Aaci_0995 PF00459 Inositol monophosphatase family Aaci_0996 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Aaci_0996 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain Aaci_0996 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Aaci_0997 PF02401 LytB protein Aaci_1000 PF13520 Amino acid permease Aaci_1001 PF01321 Creatinase/Prolidase N-terminal domain Aaci_1001 PF00557 Metallopeptidase family M24 Aaci_1004 PF14034 Sporulation protein YtrH Aaci_1005 PF00176 SNF2 family N-terminal domain Aaci_1005 PF12419 SNF2 Helicase protein Aaci_1005 PF00271 Helicase conserved C-terminal domain Aaci_1009 PF02811 PHP domain Aaci_1009 PF14579 Helix-hairpin-helix motif Aaci_1009 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Aaci_1009 PF07733 Bacterial DNA polymerase III alpha NTPase domain Aaci_1011 PF01569 PAP2 superfamily Aaci_1014 PF01230 HIT domain Aaci_1015 PF01063 Amino-transferase class IV Aaci_1017 PF01261 Xylose isomerase-like TIM barrel Aaci_1018 PF07690 Major Facilitator Superfamily Aaci_1019 PF05193 Peptidase M16 inactive domain Aaci_1020 PF05193 Peptidase M16 inactive domain Aaci_1020 PF00675 Insulinase (Peptidase family M16) Aaci_1021 PF12706 Beta-lactamase superfamily domain Aaci_1022 PF00291 Pyridoxal-phosphate dependent enzyme Aaci_1023 PF00288 GHMP kinases N terminal domain Aaci_1023 PF08544 GHMP kinases C terminal Aaci_1024 PF03061 Thioesterase superfamily Aaci_1026 PF07685 CobB/CobQ-like glutamine amidotransferase domain Aaci_1027 PF08353 Domain of unknown function (DUF1727) Aaci_1027 PF08245 Mur ligase middle domain Aaci_1031 PF01098 Cell cycle protein Aaci_1033 PF03009 Glycerophosphoryl diester phosphodiesterase family Aaci_1034 PF01098 Cell cycle protein Aaci_1035 PF00155 Aminotransferase class I and II Aaci_1038 PF08741 YwhD family Aaci_1039 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Aaci_1039 PF01276 Orn/Lys/Arg decarboxylase, major domain Aaci_1040 PF00578 AhpC/TSA family Aaci_1041 PF01521 Iron-sulphur cluster biosynthesis Aaci_1042 PF01966 HD domain Aaci_1043 PF09335 SNARE associated Golgi protein Aaci_1044 PF08827 Domain of unknown function (DUF1805) Aaci_1045 PF05343 M42 glutamyl aminopeptidase Aaci_1046 PF02681 Divergent PAP2 family Aaci_1047 PF00293 NUDIX domain Aaci_1049 PF01476 LysM domain Aaci_1049 PF06725 3D domain Aaci_1055 PF07859 alpha/beta hydrolase fold Aaci_1057 PF00171 Aldehyde dehydrogenase family Aaci_1058 PF08141 Small acid-soluble spore protein H family Aaci_1061 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Aaci_1061 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Aaci_1062 PF00589 Phage integrase family Aaci_1062 PF14659 Phage integrase, N-terminal SAM-like domain Aaci_1087 PF00712 DNA polymerase III beta subunit, N-terminal domain Aaci_1087 PF02767 DNA polymerase III beta subunit, central domain Aaci_1087 PF02768 DNA polymerase III beta subunit, C-terminal domain Aaci_1097 PF01202 Shikimate kinase Aaci_1099 PF00929 Exonuclease Aaci_1102 PF00654 Voltage gated chloride channel Aaci_1103 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_1103 PF00512 His Kinase A (phospho-acceptor) domain Aaci_1103 PF00989 PAS fold Aaci_1103 PF16736 Single Cache-like Aaci_1104 PF00486 Transcriptional regulatory protein, C terminal Aaci_1104 PF00072 Response regulator receiver domain Aaci_1105 PF00394 Multicopper oxidase Aaci_1105 PF07731 Multicopper oxidase Aaci_1105 PF07732 Multicopper oxidase Aaci_1108 PF00578 AhpC/TSA family Aaci_1109 PF02683 Cytochrome C biogenesis protein transmembrane region Aaci_1111 PF07732 Multicopper oxidase Aaci_1111 PF07731 Multicopper oxidase Aaci_1111 PF00394 Multicopper oxidase Aaci_1112 PF02583 Metal-sensitive transcriptional repressor Aaci_1113 PF00403 Heavy-metal-associated domain Aaci_1114 PF00403 Heavy-metal-associated domain Aaci_1117 PF00460 Flagella basal body rod protein Aaci_1117 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aaci_1118 PF00460 Flagella basal body rod protein Aaci_1122 PF01545 Cation efflux family Aaci_1122 PF16916 Dimerisation domain of Zinc Transporter Aaci_1123 PF01022 Bacterial regulatory protein, arsR family Aaci_1132 PF13411 MerR HTH family regulatory protein Aaci_1132 PF00145 C-5 cytosine-specific DNA methylase Aaci_1136 PF02086 D12 class N6 adenine-specific DNA methyltransferase Aaci_1138 PF04041 beta-1,4-mannooligosaccharide phosphorylase Aaci_1140 PF04542 Sigma-70 region 2 Aaci_1140 PF08281 Sigma-70, region 4 Aaci_1175 PF03707 Bacterial signalling protein N terminal repeat Aaci_1175 PF00563 EAL domain Aaci_1175 PF00990 Diguanylate cyclase, GGDEF domain Aaci_1176 PF00072 Response regulator receiver domain Aaci_1182 PF07298 NnrU protein Aaci_1188 PF00216 Bacterial DNA-binding protein Aaci_1190 PF13614 AAA domain Aaci_1194 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Aaci_1196 PF00437 Type II/IV secretion system protein Aaci_1204 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Aaci_1204 PF18277 AbrB C-terminal domain Aaci_1209 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_1209 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_1209 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_1210 PF00378 Enoyl-CoA hydratase/isomerase Aaci_1214 PF00356 Bacterial regulatory proteins, lacI family Aaci_1215 PF13416 Bacterial extracellular solute-binding protein Aaci_1216 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_1217 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_1218 PF02837 Glycosyl hydrolases family 2, sugar binding domain Aaci_1218 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Aaci_1218 PF00703 Glycosyl hydrolases family 2 Aaci_1218 PF16353 Domain of unknown function(DUF4981) Aaci_1218 PF02929 Beta galactosidase small chain Aaci_1219 PF00117 Glutamine amidotransferase class-I Aaci_1222 PF01118 Semialdehyde dehydrogenase, NAD binding domain Aaci_1222 PF02774 Semialdehyde dehydrogenase, dimerisation domain Aaci_1223 PF00696 Amino acid kinase family Aaci_1224 PF00202 Aminotransferase class-III Aaci_1225 PF14698 Argininosuccinate lyase C-terminal Aaci_1225 PF00206 Lyase Aaci_1225 PF00583 Acetyltransferase (GNAT) family Aaci_1226 PF00310 Glutamine amidotransferases class-II Aaci_1226 PF01493 GXGXG motif Aaci_1226 PF01645 Conserved region in glutamate synthase Aaci_1226 PF04898 Glutamate synthase central domain Aaci_1227 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Aaci_1227 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Aaci_1228 PF00764 Arginosuccinate synthase Aaci_1229 PF14698 Argininosuccinate lyase C-terminal Aaci_1229 PF00206 Lyase Aaci_1230 PF00696 Amino acid kinase family Aaci_1230 PF13840 ACT domain Aaci_1231 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Aaci_1231 PF01842 ACT domain Aaci_1231 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Aaci_1232 PF00266 Aminotransferase class-V Aaci_1234 PF00176 SNF2 family N-terminal domain Aaci_1234 PF00271 Helicase conserved C-terminal domain Aaci_1243 PF00392 Bacterial regulatory proteins, gntR family Aaci_1244 PF00005 ABC transporter Aaci_1246 PF00581 Rhodanese-like domain Aaci_1247 PF00085 Thioredoxin Aaci_1250 PF00378 Enoyl-CoA hydratase/isomerase Aaci_1250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Aaci_1250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aaci_1251 PF03358 NADPH-dependent FMN reductase Aaci_1252 PF07729 FCD domain Aaci_1252 PF00392 Bacterial regulatory proteins, gntR family Aaci_1253 PF01184 GPR1/FUN34/yaaH family Aaci_1254 PF13193 AMP-binding enzyme C-terminal domain Aaci_1254 PF16177 Acetyl-coenzyme A synthetase N-terminus Aaci_1254 PF00501 AMP-binding enzyme Aaci_1255 PF06949 Protein of unknown function (DUF1292) Aaci_1260 PF00574 Clp protease Aaci_1261 PF00266 Aminotransferase class-V Aaci_1262 PF02568 Thiamine biosynthesis protein (ThiI) Aaci_1262 PF02926 THUMP domain Aaci_1265 PF05504 Spore germination B3/ GerAC like, C-terminal Aaci_1267 PF10079 Bacillithiol biosynthesis BshC Aaci_1268 PF02381 MraZ protein, putative antitoxin-like Aaci_1269 PF01795 MraW methylase family Aaci_1272 PF00905 Penicillin binding protein transpeptidase domain Aaci_1272 PF03793 PASTA domain Aaci_1272 PF03717 Penicillin-binding Protein dimerisation domain Aaci_1273 PF01225 Mur ligase family, catalytic domain Aaci_1273 PF02875 Mur ligase family, glutamate ligase domain Aaci_1273 PF08245 Mur ligase middle domain Aaci_1274 PF00953 Glycosyl transferase family 4 Aaci_1275 PF02875 Mur ligase family, glutamate ligase domain Aaci_1275 PF08245 Mur ligase middle domain Aaci_1276 PF01098 Cell cycle protein Aaci_1277 PF04101 Glycosyltransferase family 28 C-terminal domain Aaci_1277 PF03033 Glycosyltransferase family 28 N-terminal domain Aaci_1278 PF01565 FAD binding domain Aaci_1278 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Aaci_1282 PF07508 Recombinase Aaci_1282 PF13408 Recombinase zinc beta ribbon domain Aaci_1282 PF00239 Resolvase, N terminal domain Aaci_1286 PF06947 Protein of unknown function (DUF1290) Aaci_1287 PF02491 SHS2 domain inserted in FTSA Aaci_1288 PF12327 FtsZ family, C-terminal domain Aaci_1288 PF00091 Tubulin/FtsZ family, GTPase domain Aaci_1289 PF03419 Sporulation factor SpoIIGA Aaci_1290 PF04542 Sigma-70 region 2 Aaci_1290 PF04545 Sigma-70, region 4 Aaci_1291 PF04542 Sigma-70 region 2 Aaci_1291 PF04545 Sigma-70, region 4 Aaci_1291 PF04539 Sigma-70 region 3 Aaci_1292 PF05239 PRC-barrel domain Aaci_1294 PF01168 Alanine racemase, N-terminal domain Aaci_1297 PF05103 DivIVA protein Aaci_1300 PF01258 Prokaryotic dksA/traR C4-type zinc finger Aaci_1301 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) Aaci_1302 PF01252 Signal peptidase (SPase) II Aaci_1303 PF00849 RNA pseudouridylate synthase Aaci_1303 PF01479 S4 domain Aaci_1304 PF00156 Phosphoribosyl transferase domain Aaci_1305 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Aaci_1305 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Aaci_1306 PF01979 Amidohydrolase family Aaci_1307 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Aaci_1307 PF00117 Glutamine amidotransferase class-I Aaci_1308 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Aaci_1308 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Aaci_1308 PF02142 MGS-like domain Aaci_1309 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Aaci_1310 PF00156 Phosphoribosyl transferase domain Aaci_1311 PF01266 FAD dependent oxidoreductase Aaci_1311 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Aaci_1313 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Aaci_1313 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Aaci_1315 PF00690 Cation transporter/ATPase, N-terminus Aaci_1315 PF00689 Cation transporting ATPase, C-terminus Aaci_1316 PF03755 YicC-like family, N-terminal region Aaci_1316 PF08340 Domain of unknown function (DUF1732) Aaci_1317 PF01192 RNA polymerase Rpb6 Aaci_1318 PF02441 Flavoprotein Aaci_1318 PF04127 DNA / pantothenate metabolism flavoprotein Aaci_1319 PF17764 3′ DNA-binding domain (3′BD) Aaci_1319 PF18074 Primosomal protein N C-terminal domain Aaci_1319 PF00271 Helicase conserved C-terminal domain Aaci_1319 PF04851 Type III restriction enzyme, res subunit Aaci_1319 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Aaci_1320 PF01327 Polypeptide deformylase Aaci_1321 PF02911 Formyl transferase, C-terminal domain Aaci_1321 PF00551 Formyl transferase Aaci_1322 PF01189 16S rRNA methyltransferase RsmB/F Aaci_1322 PF01029 NusB family Aaci_1323 PF04055 Radical SAM superfamily Aaci_1325 PF03793 PASTA domain Aaci_1325 PF00069 Protein kinase domain Aaci_1326 PF16745 RsgA N-terminal domain Aaci_1326 PF03193 RsgA GTPase Aaci_1327 PF00834 Ribulose-phosphate 3 epimerase family Aaci_1329 PF00830 Ribosomal L28 family Aaci_1330 PF00270 DEAD/DEAH box helicase Aaci_1330 PF00271 Helicase conserved C-terminal domain Aaci_1330 PF17191 RecG wedge domain Aaci_1331 PF00269 Small, acid-soluble spore proteins, alpha/beta type Aaci_1332 PF02666 Phosphatidylserine decarboxylase Aaci_1334 PF13439 Glycosyltransferase Family 4 Aaci_1334 PF00534 Glycosyl transferases group 1 Aaci_1335 PF01425 Amidase Aaci_1337 PF01467 Cytidylyltransferase-like Aaci_1338 PF01734 Patatin-like phospholipase Aaci_1340 PF01783 Ribosomal L32p protein family Aaci_1341 PF03061 Thioesterase superfamily Aaci_1342 PF02504 Fatty acid synthesis protein Aaci_1343 PF00698 Acyl transferase domain Aaci_1345 PF00550 Phosphopantetheine attachment site Aaci_1346 PF02801 Beta-ketoacyl synthase, C-terminal domain Aaci_1346 PF00109 Beta-ketoacyl synthase, N-terminal domain Aaci_1347 PF00035 Double-stranded RNA binding motif Aaci_1347 PF14622 Ribonuclease-III-like Aaci_1348 PF02463 RecF/RecN/SMC N terminal domain Aaci_1348 PF06470 SMC proteins Flexible Hinge Domain Aaci_1349 PF02881 SRP54-type protein, helical bundle domain Aaci_1349 PF00448 SRP54-type protein, GTPase domain Aaci_1350 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Aaci_1351 PF02881 SRP54-type protein, helical bundle domain Aaci_1351 PF02978 Signal peptide binding domain Aaci_1351 PF00448 SRP54-type protein, GTPase domain Aaci_1352 PF00886 Ribosomal protein S16 Aaci_1355 PF05239 PRC-barrel domain Aaci_1355 PF01782 RimM N-terminal domain Aaci_1356 PF01746 tRNA (Guanine-1)-methyltransferase Aaci_1357 PF00117 Glutamine amidotransferase class-I Aaci_1357 PF04715 Anthranilate synthase component I, N terminal region Aaci_1357 PF00425 chorismate binding enzyme Aaci_1358 PF01479 S4 domain Aaci_1358 PF00849 RNA pseudouridylate synthase Aaci_1360 PF01551 Peptidase family M23 Aaci_1361 PF03061 Thioesterase superfamily Aaci_1366 PF01245 Ribosomal protein L19 Aaci_1367 PF01926 50S ribosome-binding GTPase Aaci_1368 PF01351 Ribonuclease HII Aaci_1370 PF01312 FlhB HrpN YscU SpaS Family Aaci_1371 PF02021 Uncharacterised protein family UPF0102 Aaci_1372 PF01522 Polysaccharide deacetylase Aaci_1373 PF01078 Magnesium chelatase, subunit ChlI Aaci_1373 PF13335 Magnesium chelatase, subunit ChlI C-terminal Aaci_1375 PF08442 ATP-grasp domain Aaci_1375 PF00549 CoA-ligase Aaci_1376 PF02629 CoA binding domain Aaci_1376 PF00549 CoA-ligase Aaci_1377 PF17782 DprA winged helix domain Aaci_1377 PF02481 DNA recombination-mediator protein A Aaci_1381 PF01396 Topoisomerase DNA binding C4 zinc finger Aaci_1381 PF01131 DNA topoisomerase Aaci_1381 PF01751 Toprim domain Aaci_1382 PF01134 Glucose inhibited division protein A Aaci_1383 PF02899 Phage integrase, N-terminal SAM-like domain Aaci_1383 PF00589 Phage integrase family Aaci_1384 PF00227 Proteasome subunit Aaci_1386 PF00460 Flagella basal body rod protein Aaci_1387 PF00460 Flagella basal body rod protein Aaci_1387 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aaci_1388 PF02049 Flagellar hook-basal body complex protein FliE Aaci_1389 PF08345 Flagellar M-ring protein C-terminal Aaci_1389 PF01514 Secretory protein of YscJ/FliF family Aaci_1390 PF14842 FliG N-terminal domain Aaci_1390 PF01706 FliG C-terminal domain Aaci_1390 PF14841 FliG middle domain Aaci_1392 PF18269 T3SS EscN ATPase C-terminal domain Aaci_1392 PF02874 ATP synthase alpha/beta family, beta-barrel domain Aaci_1392 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aaci_1396 PF03963 Flagellar hook capping protein - N-terminal region Aaci_1399 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aaci_1399 PF07559 Flagellar basal body protein FlaE Aaci_1399 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aaci_1399 PF00460 Flagella basal body rod protein Aaci_1399 PF07559 Flagellar basal body protein FlaE Aaci_1399 PF00460 Flagella basal body rod protein Aaci_1402 PF02154 Flagellar motor switch protein FliM Aaci_1402 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Aaci_1403 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Aaci_1403 PF04509 CheC-like family Aaci_1404 PF00072 Response regulator receiver domain Aaci_1405 PF04347 Flagellar biosynthesis protein, FliO Aaci_1406 PF00813 FliP family Aaci_1407 PF01313 Bacterial export proteins, family 3 Aaci_1409 PF01312 FlhB HrpN YscU SpaS Family Aaci_1410 PF00771 FHIPEP family Aaci_1411 PF00448 SRP54-type protein, GTPase domain Aaci_1412 PF10609 NUBPL iron-transfer P-loop NTPase Aaci_1414 PF01584 CheW-like domain Aaci_1414 PF02895 Signal transducing histidine kinase, homodimeric domain Aaci_1414 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_1414 PF01627 Hpt domain Aaci_1414 PF07194 P2 response regulator binding domain Aaci_1415 PF01584 CheW-like domain Aaci_1416 PF04509 CheC-like family Aaci_1417 PF03975 CheD chemotactic sensory transduction Aaci_1419 PF00318 Ribosomal protein S2 Aaci_1421 PF00696 Amino acid kinase family Aaci_1422 PF01765 Ribosome recycling factor Aaci_1423 PF01255 Putative undecaprenyl diphosphate synthase Aaci_1425 PF13288 DXP reductoisomerase C-terminal domain Aaci_1425 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Aaci_1425 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Aaci_1426 PF02163 Peptidase family M50 Aaci_1426 PF13180 PDZ domain Aaci_1427 PF00929 Exonuclease Aaci_1427 PF02811 PHP domain Aaci_1427 PF14579 Helix-hairpin-helix motif Aaci_1427 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Aaci_1427 PF07733 Bacterial DNA polymerase III alpha NTPase domain Aaci_1427 PF11490 DNA polymerase III polC-type N-terminus II Aaci_1427 PF14480 DNA polymerase III polC-type N-terminus I Aaci_1428 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aaci_1429 PF01842 ACT domain Aaci_1429 PF00800 Prephenate dehydratase Aaci_1431 PF17384 RimP C-terminal SH3 domain Aaci_1431 PF02576 RimP N-terminal domain Aaci_1432 PF13184 NusA-like KH domain Aaci_1432 PF00575 S1 RNA binding domain Aaci_1432 PF08529 NusA N-terminal domain Aaci_1433 PF04296 Protein of unknown function (DUF448) Aaci_1435 PF04760 Translation initiation factor IF-2, N-terminal region Aaci_1435 PF00009 Elongation factor Tu GTP binding domain Aaci_1435 PF11987 Translation-initiation factor 2 Aaci_1436 PF02033 Ribosome-binding factor A Aaci_1437 PF01368 DHH family Aaci_1437 PF02272 DHHA1 domain Aaci_1438 PF01509 TruB family pseudouridylate synthase (N terminal domain) Aaci_1438 PF16198 tRNA pseudouridylate synthase B C-terminal domain Aaci_1438 PF09142 tRNA Pseudouridine synthase II, C terminal Aaci_1439 PF01687 Riboflavin kinase Aaci_1439 PF06574 FAD synthetase Aaci_1441 PF00312 Ribosomal protein S15 Aaci_1442 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Aaci_1442 PF01138 3' exoribonuclease family, domain 1 Aaci_1442 PF03725 3' exoribonuclease family, domain 2 Aaci_1442 PF00575 S1 RNA binding domain Aaci_1442 PF00013 KH domain Aaci_1443 PF01522 Polysaccharide deacetylase Aaci_1444 PF05193 Peptidase M16 inactive domain Aaci_1444 PF00675 Insulinase (Peptidase family M16) Aaci_1445 PF00692 dUTPase Aaci_1446 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Aaci_1446 PF16924 Dipicolinate synthase subunit A N-terminal domain Aaci_1447 PF02441 Flavoprotein Aaci_1448 PF02774 Semialdehyde dehydrogenase, dimerisation domain Aaci_1448 PF01118 Semialdehyde dehydrogenase, NAD binding domain Aaci_1449 PF00696 Amino acid kinase family Aaci_1449 PF13840 ACT domain Aaci_1450 PF00701 Dihydrodipicolinate synthetase family Aaci_1451 PF17785 PUA-like domain Aaci_1451 PF10672 S-adenosylmethionine-dependent methyltransferase Aaci_1452 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_1452 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_1452 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_1453 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Aaci_1453 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Aaci_1454 PF00171 Aldehyde dehydrogenase family Aaci_1455 PF00378 Enoyl-CoA hydratase/isomerase Aaci_1456 PF00501 AMP-binding enzyme Aaci_1456 PF13193 AMP-binding enzyme C-terminal domain Aaci_1457 PF02803 Thiolase, C-terminal domain Aaci_1457 PF00108 Thiolase, N-terminal domain Aaci_1458 PF00106 short chain dehydrogenase Aaci_1459 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Aaci_1459 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Aaci_1460 PF17770 Ribonuclease J C-terminal domain Aaci_1460 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Aaci_1460 PF00753 Metallo-beta-lactamase superfamily Aaci_1461 PF00574 Clp protease Aaci_1463 PF01580 FtsK/SpoIIIE family Aaci_1463 PF17854 FtsK alpha domain Aaci_1463 PF09397 Ftsk gamma domain Aaci_1467 PF11868 Protein of unknown function (DUF3388) Aaci_1468 PF13464 Domain of unknown function (DUF4115) Aaci_1469 PF04461 Protein of unknown function (DUF520) Aaci_1470 PF01066 CDP-alcohol phosphatidyltransferase Aaci_1472 PF00271 Helicase conserved C-terminal domain Aaci_1472 PF00270 DEAD/DEAH box helicase Aaci_1473 PF00154 recA bacterial DNA recombination protein Aaci_1474 PF02631 RecX family Aaci_1475 PF12072 Domain of unknown function (DUF3552) Aaci_1475 PF00013 KH domain Aaci_1475 PF01966 HD domain Aaci_1476 PF04232 Stage V sporulation protein S (SpoVS) Aaci_1482 PF14398 YheC/D like ATP-grasp Aaci_1484 PF01938 TRAM domain Aaci_1484 PF04055 Radical SAM superfamily Aaci_1484 PF00919 Uncharacterized protein family UPF0004 Aaci_1486 PF05192 MutS domain III Aaci_1486 PF05190 MutS family domain IV Aaci_1486 PF00488 MutS domain V Aaci_1486 PF05188 MutS domain II Aaci_1486 PF01624 MutS domain I Aaci_1487 PF08676 MutL C terminal dimerisation domain Aaci_1487 PF01119 DNA mismatch repair protein, C-terminal domain Aaci_1488 PF04445 Putative SAM-dependent methyltransferase Aaci_1490 PF17209 Hfq protein Aaci_1500 PF00929 Exonuclease Aaci_1505 PF00005 ABC transporter Aaci_1506 PF12704 MacB-like periplasmic core domain Aaci_1506 PF02687 FtsX-like permease family Aaci_1506 PF00005 ABC transporter Aaci_1508 PF01695 IstB-like ATP binding protein Aaci_1511 PF00872 Transposase, Mutator family Aaci_1513 PF00872 Transposase, Mutator family Aaci_1522 PF00872 Transposase, Mutator family Aaci_1527 PF00132 Bacterial transferase hexapeptide (six repeats) Aaci_1531 PF00872 Transposase, Mutator family Aaci_1534 PF08281 Sigma-70, region 4 Aaci_1534 PF04542 Sigma-70 region 2 Aaci_1539 PF00872 Transposase, Mutator family Aaci_1550 PF00872 Transposase, Mutator family Aaci_1551 PF13087 AAA domain Aaci_1551 PF13195 Protein of unknown function (DUF4011) Aaci_1551 PF13087 AAA domain Aaci_1551 PF13195 Protein of unknown function (DUF4011) Aaci_1551 PF13086 AAA domain Aaci_1551 PF13086 AAA domain Aaci_1554 PF00665 Integrase core domain Aaci_1554 PF02796 Helix-turn-helix domain of resolvase Aaci_1555 PF01695 IstB-like ATP binding protein Aaci_1557 PF00180 Isocitrate/isopropylmalate dehydrogenase Aaci_1557 PF18324 Hypothetical protein TT1725 Aaci_1558 PF03323 Bacillus/Clostridium GerA spore germination protein Aaci_1562 PF03323 Bacillus/Clostridium GerA spore germination protein Aaci_1563 PF16363 GDP-mannose 4,6 dehydratase Aaci_1564 PF01943 Polysaccharide biosynthesis protein Aaci_1564 PF14667 Polysaccharide biosynthesis C-terminal domain Aaci_1566 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_1566 PF17866 AAA lid domain Aaci_1570 PF16360 GTP-binding GTPase Middle Region Aaci_1570 PF13167 GTP-binding GTPase N-terminal Aaci_1570 PF01926 50S ribosome-binding GTPase Aaci_1571 PF06838 Methionine gamma-lyase Aaci_1572 PF13411 MerR HTH family regulatory protein Aaci_1573 PF03951 Glutamine synthetase, beta-Grasp domain Aaci_1573 PF00120 Glutamine synthetase, catalytic domain Aaci_1574 PF00356 Bacterial regulatory proteins, lacI family Aaci_1575 PF08666 SAF domain Aaci_1575 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Aaci_1576 PF04962 KduI/IolB family Aaci_1577 PF01232 Mannitol dehydrogenase Rossmann domain Aaci_1577 PF08125 Mannitol dehydrogenase C-terminal domain Aaci_1578 PF00083 Sugar (and other) transporter Aaci_1579 PF00717 Peptidase S24-like Aaci_1579 PF01726 LexA DNA binding domain Aaci_1581 PF03129 Anticodon binding domain Aaci_1581 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Aaci_1583 PF02219 Methylenetetrahydrofolate reductase Aaci_1583 PF02574 Homocysteine S-methyltransferase Aaci_1585 PF00990 Diguanylate cyclase, GGDEF domain Aaci_1585 PF17158 Membrane-associated sensor, integral membrane domain Aaci_1590 PF01012 Electron transfer flavoprotein domain Aaci_1590 PF00766 Electron transfer flavoprotein FAD-binding domain Aaci_1591 PF01012 Electron transfer flavoprotein domain Aaci_1592 PF00440 Bacterial regulatory proteins, tetR family Aaci_1592 PF08359 YsiA-like protein, C-terminal region Aaci_1593 PF13183 4Fe-4S dicluster domain Aaci_1593 PF02754 Cysteine-rich domain Aaci_1594 PF00378 Enoyl-CoA hydratase/isomerase Aaci_1594 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Aaci_1594 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aaci_1595 PF02803 Thiolase, C-terminal domain Aaci_1595 PF00108 Thiolase, N-terminal domain Aaci_1596 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_1596 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_1596 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_1597 PF00501 AMP-binding enzyme Aaci_1597 PF13193 AMP-binding enzyme C-terminal domain Aaci_1599 PF00317 Ribonucleotide reductase, all-alpha domain Aaci_1599 PF02867 Ribonucleotide reductase, barrel domain Aaci_1599 PF03477 ATP cone domain Aaci_1600 PF00268 Ribonucleotide reductase, small chain Aaci_1601 PF13520 Amino acid permease Aaci_1602 PF12805 FUSC-like inner membrane protein yccS Aaci_1606 PF03618 Kinase/pyrophosphorylase Aaci_1607 PF01380 SIS domain Aaci_1607 PF00571 CBS domain Aaci_1608 PF00391 PEP-utilising enzyme, mobile domain Aaci_1608 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Aaci_1608 PF02896 PEP-utilising enzyme, TIM barrel domain Aaci_1609 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Aaci_1611 PF03737 Aldolase/RraA Aaci_1612 PF02585 GlcNAc-PI de-N-acetylase Aaci_1614 PF00392 Bacterial regulatory proteins, gntR family Aaci_1614 PF07729 FCD domain Aaci_1615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aaci_1617 PF01361 Tautomerase enzyme Aaci_1619 PF00682 HMGL-like Aaci_1619 PF07836 DmpG-like communication domain Aaci_1620 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation Aaci_1620 PF01118 Semialdehyde dehydrogenase, NAD binding domain Aaci_1621 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aaci_1622 PF00171 Aldehyde dehydrogenase family Aaci_1624 PF01614 Bacterial transcriptional regulator Aaci_1624 PF09339 IclR helix-turn-helix domain Aaci_1625 PF01494 FAD binding domain Aaci_1627 PF12804 MobA-like NTP transferase domain Aaci_1628 PF03951 Glutamine synthetase, beta-Grasp domain Aaci_1628 PF00120 Glutamine synthetase, catalytic domain Aaci_1629 PF01931 Protein of unknown function DUF84 Aaci_1630 PF01134 Glucose inhibited division protein A Aaci_1630 PF13932 GidA associated domain Aaci_1631 PF01566 Natural resistance-associated macrophage protein Aaci_1632 PF01588 Putative tRNA binding domain Aaci_1635 PF02875 Mur ligase family, glutamate ligase domain Aaci_1635 PF08245 Mur ligase middle domain Aaci_1635 PF01225 Mur ligase family, catalytic domain Aaci_1636 PF07478 D-ala D-ala ligase C-terminus Aaci_1636 PF01820 D-ala D-ala ligase N-terminus Aaci_1637 PF07261 Replication initiation and membrane attachment Aaci_1638 PF01336 OB-fold nucleic acid binding domain Aaci_1638 PF00152 tRNA synthetases class II (D, K and N) Aaci_1639 PF01434 Peptidase family M41 Aaci_1639 PF17862 AAA+ lid domain Aaci_1639 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_1642 PF14084 Protein of unknown function (DUF4264) Aaci_1643 PF01975 Survival protein SurE Aaci_1645 PF01979 Amidohydrolase family Aaci_1646 PF01008 Initiation factor 2 subunit family Aaci_1647 PF01048 Phosphorylase superfamily Aaci_1648 PF01068 ATP dependent DNA ligase domain Aaci_1650 PF02735 Ku70/Ku80 beta-barrel domain Aaci_1651 PF04851 Type III restriction enzyme, res subunit Aaci_1651 PF13307 Helicase C-terminal domain Aaci_1651 PF00929 Exonuclease Aaci_1653 PF02237 Biotin protein ligase C terminal domain Aaci_1653 PF03099 Biotin/lipoate A/B protein ligase family Aaci_1653 PF08279 HTH domain Aaci_1654 PF01743 Poly A polymerase head domain Aaci_1654 PF12627 Probable RNA and SrmB- binding site of polymerase A Aaci_1654 PF13735 tRNA nucleotidyltransferase domain 2 putative Aaci_1655 PF00534 Glycosyl transferases group 1 Aaci_1655 PF13439 Glycosyltransferase Family 4 Aaci_1656 PF05173 Dihydrodipicolinate reductase, C-terminus Aaci_1656 PF01113 Dihydrodipicolinate reductase, N-terminus Aaci_1657 PF03819 MazG nucleotide pyrophosphohydrolase domain Aaci_1659 PF07670 Nucleoside recognition Aaci_1660 PF02673 Bacitracin resistance protein BacA Aaci_1662 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Aaci_1662 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Aaci_1663 PF08858 IDEAL domain Aaci_1663 PF08864 UPF0302 domain Aaci_1665 PF02153 Prephenate dehydrogenase Aaci_1666 PF18152 DAHP synthase ferredoxin-like domain Aaci_1666 PF00793 DAHP synthetase I family Aaci_1667 PF00290 Tryptophan synthase alpha chain Aaci_1668 PF00291 Pyridoxal-phosphate dependent enzyme Aaci_1669 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Aaci_1670 PF00218 Indole-3-glycerol phosphate synthase Aaci_1671 PF00591 Glycosyl transferase family, a/b domain Aaci_1671 PF02885 Glycosyl transferase family, helical bundle domain Aaci_1672 PF07736 Chorismate mutase type I Aaci_1673 PF01761 3-dehydroquinate synthase Aaci_1674 PF01264 Chorismate synthase Aaci_1677 PF05343 M42 glutamyl aminopeptidase Aaci_1678 PF00849 RNA pseudouridylate synthase Aaci_1678 PF01479 S4 domain Aaci_1681 PF01476 LysM domain Aaci_1681 PF00877 NlpC/P60 family Aaci_1683 PF07728 AAA domain (dynein-related subfamily) Aaci_1685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Aaci_1685 PF02817 e3 binding domain Aaci_1685 PF00364 Biotin-requiring enzyme Aaci_1686 PF00912 Transglycosylase Aaci_1686 PF17092 Penicillin-binding protein OB-like domain Aaci_1686 PF00905 Penicillin binding protein transpeptidase domain Aaci_1689 PF01739 CheR methyltransferase, SAM binding domain Aaci_1689 PF03705 CheR methyltransferase, all-alpha domain Aaci_1691 PF00334 Nucleoside diphosphate kinase Aaci_1692 PF00348 Polyprenyl synthetase Aaci_1693 PF01209 ubiE/COQ5 methyltransferase family Aaci_1695 PF02081 Tryptophan RNA-binding attenuator protein Aaci_1696 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_1696 PF00107 Zinc-binding dehydrogenase Aaci_1697 PF09547 Stage IV sporulation protein A (spore_IV_A) Aaci_1698 PF01597 Glycine cleavage H-protein Aaci_1699 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Aaci_1699 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Aaci_1700 PF02660 Glycerol-3-phosphate acyltransferase Aaci_1701 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Aaci_1701 PF01926 50S ribosome-binding GTPase Aaci_1703 PF00575 S1 RNA binding domain Aaci_1705 PF02224 Cytidylate kinase Aaci_1707 PF07238 PilZ domain Aaci_1707 PF07317 Flagellar regulator YcgR Aaci_1709 PF01471 Putative peptidoglycan binding domain Aaci_1709 PF07486 Cell Wall Hydrolase Aaci_1711 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Aaci_1711 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Aaci_1712 PF05389 Negative regulator of genetic competence (MecA) Aaci_1713 PF00356 Bacterial regulatory proteins, lacI family Aaci_1715 PF00580 UvrD/REP helicase N-terminal domain Aaci_1715 PF13361 UvrD-like helicase C-terminal domain Aaci_1715 PF00580 UvrD/REP helicase N-terminal domain Aaci_1715 PF13361 UvrD-like helicase C-terminal domain Aaci_1717 PF08241 Methyltransferase domain Aaci_1719 PF17820 PDZ domain Aaci_1719 PF13180 PDZ domain Aaci_1722 PF13367 PrsW family intramembrane metalloprotease Aaci_1724 PF02146 Sir2 family Aaci_1725 PF01381 Helix-turn-helix Aaci_1727 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_1727 PF00512 His Kinase A (phospho-acceptor) domain Aaci_1727 PF00989 PAS fold Aaci_1727 PF00672 HAMP domain Aaci_1727 PF18698 Histidine kinase sensor domain Aaci_1728 PF00486 Transcriptional regulatory protein, C terminal Aaci_1728 PF00072 Response regulator receiver domain Aaci_1730 PF00849 RNA pseudouridylate synthase Aaci_1730 PF01479 S4 domain Aaci_1731 PF07670 Nucleoside recognition Aaci_1732 PF07670 Nucleoside recognition Aaci_1733 PF09579 Sporulation protein YtfJ (Spore_YtfJ) Aaci_1735 PF04079 Segregation and condensation complex subunit ScpB Aaci_1736 PF02616 Segregation and condensation protein ScpA Aaci_1737 PF02163 Peptidase family M50 Aaci_1740 PF14097 Stage V sporulation protein AE1 Aaci_1741 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Aaci_1742 PF07451 Stage V sporulation protein AD (SpoVAD) Aaci_1743 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Aaci_1744 PF04542 Sigma-70 region 2 Aaci_1744 PF04539 Sigma-70 region 3 Aaci_1744 PF04545 Sigma-70, region 4 Aaci_1745 PF13581 Histidine kinase-like ATPase domain Aaci_1746 PF01740 STAS domain Aaci_1748 PF07943 Penicillin-binding protein 5, C-terminal domain Aaci_1748 PF00768 D-alanyl-D-alanine carboxypeptidase Aaci_1749 PF01676 Metalloenzyme superfamily Aaci_1750 PF00589 Phage integrase family Aaci_1750 PF02899 Phage integrase, N-terminal SAM-like domain Aaci_1754 PF00293 NUDIX domain Aaci_1756 PF03099 Biotin/lipoate A/B protein ligase family Aaci_1757 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Aaci_1757 PF04055 Radical SAM superfamily Aaci_1758 PF01967 MoaC family Aaci_1759 PF02391 MoaE protein Aaci_1760 PF00704 Glycosyl hydrolases family 18 Aaci_1760 PF01476 LysM domain Aaci_1764 PF07687 Peptidase dimerisation domain Aaci_1764 PF01546 Peptidase family M20/M25/M40 Aaci_1767 PF00072 Response regulator receiver domain Aaci_1767 PF08769 Sporulation initiation factor Spo0A C terminal Aaci_1768 PF17820 PDZ domain Aaci_1768 PF05580 SpoIVB peptidase S55 Aaci_1769 PF02463 RecF/RecN/SMC N terminal domain Aaci_1770 PF01513 ATP-NAD kinase Aaci_1772 PF01728 FtsJ-like methyltransferase Aaci_1772 PF01479 S4 domain Aaci_1774 PF00348 Polyprenyl synthetase Aaci_1775 PF02609 Exonuclease VII small subunit Aaci_1776 PF13742 OB-fold nucleic acid binding domain Aaci_1776 PF02601 Exonuclease VII, large subunit Aaci_1777 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Aaci_1777 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Aaci_1778 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_1779 PF00814 Glycoprotease family Aaci_1780 PF01029 NusB family Aaci_1783 PF03780 Asp23 family, cell envelope-related function Aaci_1784 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Aaci_1784 PF00289 Biotin carboxylase, N-terminal domain Aaci_1784 PF02785 Biotin carboxylase C-terminal domain Aaci_1785 PF00364 Biotin-requiring enzyme Aaci_1789 PF09546 Stage III sporulation protein AE (spore_III_AE) Aaci_1790 PF06686 Stage III sporulation protein AC/AD protein family Aaci_1795 PF01132 Elongation factor P (EF-P) OB domain Aaci_1795 PF08207 Elongation factor P (EF-P) KOW-like domain Aaci_1795 PF09285 Elongation factor P, C-terminal Aaci_1796 PF01220 Dehydroquinase class II Aaci_1797 PF00300 Histidine phosphatase superfamily (branch 1) Aaci_1798 PF02347 Glycine cleavage system P-protein Aaci_1799 PF02347 Glycine cleavage system P-protein Aaci_1800 PF01571 Aminomethyltransferase folate-binding domain Aaci_1800 PF08669 Glycine cleavage T-protein C-terminal barrel domain Aaci_1801 PF00176 SNF2 family N-terminal domain Aaci_1801 PF00271 Helicase conserved C-terminal domain Aaci_1802 PF11079 Bacterial protein YqhG of unknown function Aaci_1803 PF00308 Bacterial dnaA protein Aaci_1803 PF08299 Bacterial dnaA protein helix-turn-helix Aaci_1804 PF01202 Shikimate kinase Aaci_1809 PF07963 Prokaryotic N-terminal methylation motif Aaci_1809 PF08334 Type II secretion system (T2SS), protein G Aaci_1811 PF00437 Type II/IV secretion system protein Aaci_1813 PF01018 GTP1/OBG Aaci_1813 PF01926 50S ribosome-binding GTPase Aaci_1813 PF09269 Domain of unknown function (DUF1967) Aaci_1815 PF01016 Ribosomal L27 protein Aaci_1816 PF04327 Cysteine protease Prp Aaci_1817 PF00829 Ribosomal prokaryotic L21 protein Aaci_1818 PF02163 Peptidase family M50 Aaci_1820 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Aaci_1821 PF03775 Septum formation inhibitor MinC, C-terminal domain Aaci_1825 PF04002 RadC-like JAB domain Aaci_1825 PF12826 Helix-hairpin-helix motif Aaci_1827 PF04185 Phosphoesterase family Aaci_1827 PF05506 Domain of unknown function (DUF756) Aaci_1828 PF03990 G5-linked-Ubiquitin-like domain Aaci_1828 PF07501 G5 domain Aaci_1828 PF06725 3D domain Aaci_1829 PF01225 Mur ligase family, catalytic domain Aaci_1829 PF02875 Mur ligase family, glutamate ligase domain Aaci_1829 PF08245 Mur ligase middle domain Aaci_1830 PF02875 Mur ligase family, glutamate ligase domain Aaci_1830 PF08245 Mur ligase middle domain Aaci_1831 PF08264 Anticodon-binding domain of tRNA Aaci_1831 PF00133 tRNA synthetases class I (I, L, M and V) Aaci_1831 PF10458 Valyl tRNA synthetase tRNA binding arm Aaci_1835 PF00202 Aminotransferase class-III Aaci_1836 PF00490 Delta-aminolevulinic acid dehydratase Aaci_1838 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Aaci_1838 PF03900 Porphobilinogen deaminase, C-terminal domain Aaci_1840 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Aaci_1840 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Aaci_1840 PF01488 Shikimate / quinate 5-dehydrogenase Aaci_1841 PF01926 50S ribosome-binding GTPase Aaci_1842 PF02190 ATP-dependent protease La (LON) substrate-binding domain Aaci_1842 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_1842 PF05362 Lon protease (S16) C-terminal proteolytic domain Aaci_1843 PF05362 Lon protease (S16) C-terminal proteolytic domain Aaci_1843 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_1844 PF10431 C-terminal, D2-small domain, of ClpB protein Aaci_1844 PF07724 AAA domain (Cdc48 subfamily) Aaci_1844 PF06689 ClpX C4-type zinc finger Aaci_1845 PF00574 Clp protease Aaci_1846 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Aaci_1846 PF05697 Bacterial trigger factor protein (TF) Aaci_1846 PF05698 Bacterial trigger factor protein (TF) C-terminus Aaci_1847 PF01725 Ham1 family Aaci_1848 PF01177 Asp/Glu/Hydantoin racemase Aaci_1849 PF01047 MarR family Aaci_1850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_1850 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_1850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_1851 PF02515 CoA-transferase family III Aaci_1854 PF00196 Bacterial regulatory proteins, luxR family Aaci_1855 PF00155 Aminotransferase class I and II Aaci_1857 PF00392 Bacterial regulatory proteins, gntR family Aaci_1857 PF07702 UTRA domain Aaci_1861 PF13085 2Fe-2S iron-sulfur cluster binding domain Aaci_1861 PF13183 4Fe-4S dicluster domain Aaci_1862 PF02910 Fumarate reductase flavoprotein C-term Aaci_1862 PF00890 FAD binding domain Aaci_1863 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Aaci_1864 PF02151 UvrB/uvrC motif Aaci_1864 PF01541 GIY-YIG catalytic domain Aaci_1864 PF08459 UvrC Helix-hairpin-helix N-terminal Aaci_1866 PF00749 tRNA synthetases class I (E and Q), catalytic domain Aaci_1868 PF00155 Aminotransferase class I and II Aaci_1870 PF01699 Sodium/calcium exchanger protein Aaci_1876 PF00535 Glycosyl transferase family 2 Aaci_1878 PF01047 MarR family Aaci_1881 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Aaci_1882 PF13396 Phospholipase_D-nuclease N-terminal Aaci_1882 PF13091 PLD-like domain Aaci_1884 PF00893 Small Multidrug Resistance protein Aaci_1885 PF16916 Dimerisation domain of Zinc Transporter Aaci_1885 PF01545 Cation efflux family Aaci_1886 PF03477 ATP cone domain Aaci_1886 PF00317 Ribonucleotide reductase, all-alpha domain Aaci_1886 PF02867 Ribonucleotide reductase, barrel domain Aaci_1887 PF03477 ATP cone domain Aaci_1888 PF13344 Haloacid dehalogenase-like hydrolase Aaci_1889 PF16123 Hydroxyacylglutathione hydrolase C-terminus Aaci_1889 PF00753 Metallo-beta-lactamase superfamily Aaci_1891 PF00535 Glycosyl transferase family 2 Aaci_1892 PF00892 EamA-like transporter family Aaci_1893 PF01678 Diaminopimelate epimerase Aaci_1896 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aaci_1896 PF00005 ABC transporter Aaci_1897 PF00005 ABC transporter Aaci_1897 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aaci_1898 PF12911 N-terminal TM domain of oligopeptide transport permease C Aaci_1898 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_1899 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_1900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_1902 PF12800 4Fe-4S binding domain Aaci_1902 PF00037 4Fe-4S binding domain Aaci_1904 PF00872 Transposase, Mutator family Aaci_1905 PF00005 ABC transporter Aaci_1906 PF01895 PhoU domain Aaci_1908 PF00877 NlpC/P60 family Aaci_1908 PF01476 LysM domain Aaci_1909 PF01613 Flavin reductase like domain Aaci_1910 PF04101 Glycosyltransferase family 28 C-terminal domain Aaci_1910 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase Aaci_1912 PF01522 Polysaccharide deacetylase Aaci_1914 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_1915 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_1916 PF12849 PBP superfamily domain Aaci_1917 PF00561 alpha/beta hydrolase fold Aaci_1918 PF16582 Middle domain of thiamine pyrophosphate Aaci_1918 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Aaci_1918 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Aaci_1919 PF00425 chorismate binding enzyme Aaci_1921 PF00378 Enoyl-CoA hydratase/isomerase Aaci_1922 PF01040 UbiA prenyltransferase family Aaci_1923 PF02634 FdhD/NarQ family Aaci_1924 PF07849 Protein of unknown function (DUF1641) Aaci_1925 PF01568 Molydopterin dinucleotide binding domain Aaci_1925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Aaci_1925 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Aaci_1925 PF00384 Molybdopterin oxidoreductase Aaci_1925 PF12838 4Fe-4S dicluster domain Aaci_1926 PF03190 Protein of unknown function, DUF255 Aaci_1927 PF03190 Protein of unknown function, DUF255 Aaci_1928 PF00583 Acetyltransferase (GNAT) family Aaci_1929 PF00892 EamA-like transporter family Aaci_1931 PF03070 TENA/THI-4/PQQC family Aaci_1932 PF08543 Phosphomethylpyrimidine kinase Aaci_1933 PF02110 Hydroxyethylthiazole kinase family Aaci_1934 PF02581 Thiamine monophosphate synthase Aaci_1935 PF00664 ABC transporter transmembrane region Aaci_1935 PF00005 ABC transporter Aaci_1936 PF00664 ABC transporter transmembrane region Aaci_1936 PF00005 ABC transporter Aaci_1937 PF02322 Cytochrome bd terminal oxidase subunit II Aaci_1938 PF01654 Cytochrome bd terminal oxidase subunit I Aaci_1939 PF07690 Major Facilitator Superfamily Aaci_1940 PF01047 MarR family Aaci_1942 PF00005 ABC transporter Aaci_1943 PF01032 FecCD transport family Aaci_1944 PF01497 Periplasmic binding protein Aaci_1946 PF01923 Cobalamin adenosyltransferase Aaci_1947 PF02277 Phosphoribosyltransferase Aaci_1948 PF01638 HxlR-like helix-turn-helix Aaci_1949 PF01242 6-pyruvoyl tetrahydropterin synthase Aaci_1950 PF04055 Radical SAM superfamily Aaci_1951 PF13419 Haloacid dehalogenase-like hydrolase Aaci_1952 PF00269 Small, acid-soluble spore proteins, alpha/beta type Aaci_1953 PF02541 Ppx/GppA phosphatase family Aaci_1954 PF01790 Prolipoprotein diacylglyceryl transferase Aaci_1956 PF04204 Homoserine O-succinyltransferase Aaci_1958 PF01384 Phosphate transporter family Aaci_1959 PF02261 Aspartate decarboxylase Aaci_1962 PF03323 Bacillus/Clostridium GerA spore germination protein Aaci_1966 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_1966 PF00512 His Kinase A (phospho-acceptor) domain Aaci_1966 PF08447 PAS fold Aaci_1966 PF00989 PAS fold Aaci_1968 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Aaci_1969 PF18698 Histidine kinase sensor domain Aaci_1969 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_1969 PF00672 HAMP domain Aaci_1969 PF00512 His Kinase A (phospho-acceptor) domain Aaci_1969 PF00989 PAS fold Aaci_1970 PF00072 Response regulator receiver domain Aaci_1970 PF00486 Transcriptional regulatory protein, C terminal Aaci_1974 PF01784 NIF3 (NGG1p interacting factor 3) Aaci_1975 PF04816 tRNA (adenine(22)-N(1))-methyltransferase Aaci_1977 PF03979 Sigma-70 factor, region 1.1 Aaci_1977 PF00140 Sigma-70 factor, region 1.2 Aaci_1977 PF04542 Sigma-70 region 2 Aaci_1977 PF04539 Sigma-70 region 3 Aaci_1977 PF04545 Sigma-70, region 4 Aaci_1978 PF10410 DnaB-helicase binding domain of primase Aaci_1978 PF01807 CHC2 zinc finger Aaci_1978 PF08275 DNA primase catalytic core, N-terminal domain Aaci_1979 PF02565 Recombination protein O C terminal Aaci_1979 PF11967 Recombination protein O N terminal Aaci_1981 PF07650 KH domain Aaci_1981 PF01926 50S ribosome-binding GTPase Aaci_1983 PF02130 Uncharacterized protein family UPF0054 Aaci_1984 PF07697 7TM-HD extracellular Aaci_1984 PF01966 HD domain Aaci_1984 PF07698 7TM receptor with intracellular HD hydrolase Aaci_1985 PF02562 PhoH-like protein Aaci_1988 PF09424 Yqey-like protein Aaci_1989 PF01165 Ribosomal protein S21 Aaci_1991 PF01791 DeoC/LacD family aldolase Aaci_1992 PF04055 Radical SAM superfamily Aaci_1992 PF00919 Uncharacterized protein family UPF0004 Aaci_1992 PF01938 TRAM domain Aaci_1993 PF04452 RNA methyltransferase Aaci_1995 PF00684 DnaJ central domain Aaci_1995 PF01556 DnaJ C terminal domain Aaci_1995 PF00226 DnaJ domain Aaci_1996 PF00012 Hsp70 protein Aaci_1997 PF01025 GrpE Aaci_1998 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Aaci_1998 PF01628 HrcA protein C terminal domain Aaci_1999 PF06969 HemN C-terminal domain Aaci_1999 PF04055 Radical SAM superfamily Aaci_2000 PF00679 Elongation factor G C-terminus Aaci_2000 PF06421 GTP-binding protein LepA C-terminus Aaci_2000 PF00009 Elongation factor Tu GTP binding domain Aaci_2000 PF03144 Elongation factor Tu domain 2 Aaci_2003 PF01464 Transglycosylase SLT domain Aaci_2004 PF03418 Germination protease Aaci_2005 PF01649 Ribosomal protein S20 Aaci_2008 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_2010 PF10531 SLBB domain Aaci_2011 PF01325 Iron dependent repressor, N-terminal DNA binding domain Aaci_2011 PF02742 Iron dependent repressor, metal binding and dimerisation domain Aaci_2012 PF12697 Alpha/beta hydrolase family Aaci_2012 PF08241 Methyltransferase domain Aaci_2014 PF01966 HD domain Aaci_2015 PF01467 Cytidylyltransferase-like Aaci_2016 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Aaci_2016 PF08501 Shikimate dehydrogenase substrate binding domain Aaci_2016 PF01488 Shikimate / quinate 5-dehydrogenase Aaci_2017 PF01926 50S ribosome-binding GTPase Aaci_2017 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Aaci_2020 PF04545 Sigma-70, region 4 Aaci_2020 PF04542 Sigma-70 region 2 Aaci_2021 PF01209 ubiE/COQ5 methyltransferase family Aaci_2024 PF03652 Holliday junction resolvase Aaci_2025 PF06135 IreB regulatory phosphoprotein Aaci_2026 PF02272 DHHA1 domain Aaci_2026 PF01411 tRNA synthetases class II (A) Aaci_2026 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Aaci_2027 PF01594 AI-2E family transporter Aaci_2029 PF00266 Aminotransferase class-V Aaci_2030 PF02082 Transcriptional regulator Aaci_2031 PF16193 AAA C-terminal domain Aaci_2031 PF12002 MgsA AAA+ ATPase C terminal Aaci_2031 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_2033 PF01451 Low molecular weight phosphotyrosine protein phosphatase Aaci_2035 PF13193 AMP-binding enzyme C-terminal domain Aaci_2035 PF00501 AMP-binding enzyme Aaci_2037 PF02938 GAD domain Aaci_2037 PF00152 tRNA synthetases class II (D, K and N) Aaci_2037 PF01336 OB-fold nucleic acid binding domain Aaci_2038 PF03129 Anticodon binding domain Aaci_2038 PF13393 Histidyl-tRNA synthetase Aaci_2040 PF00202 Aminotransferase class-III Aaci_2043 PF00005 ABC transporter Aaci_2045 PF07690 Major Facilitator Superfamily Aaci_2047 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2048 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2050 PF00355 Rieske [2Fe-2S] domain Aaci_2051 PF00378 Enoyl-CoA hydratase/isomerase Aaci_2052 PF01039 Carboxyl transferase domain Aaci_2053 PF00682 HMGL-like Aaci_2054 PF00364 Biotin-requiring enzyme Aaci_2056 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_2056 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_2056 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_2058 PF02803 Thiolase, C-terminal domain Aaci_2058 PF00108 Thiolase, N-terminal domain Aaci_2059 PF01144 Coenzyme A transferase Aaci_2060 PF01144 Coenzyme A transferase Aaci_2063 PF14489 QueF-like protein Aaci_2064 PF01189 16S rRNA methyltransferase RsmB/F Aaci_2064 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF Aaci_2064 PF17126 RsmF rRNA methyltransferase first C-terminal domain Aaci_2065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aaci_2065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Aaci_2071 PF00248 Aldo/keto reductase family Aaci_2072 PF03453 MoeA N-terminal region (domain I and II) Aaci_2072 PF03454 MoeA C-terminal region (domain IV) Aaci_2072 PF00994 Probable molybdopterin binding domain Aaci_2073 PF00483 Nucleotidyl transferase Aaci_2074 PF08239 Bacterial SH3 domain Aaci_2074 PF00877 NlpC/P60 family Aaci_2074 PF01476 LysM domain Aaci_2076 PF00580 UvrD/REP helicase N-terminal domain Aaci_2076 PF13361 UvrD-like helicase C-terminal domain Aaci_2076 PF12705 PD-(D/E)XK nuclease superfamily Aaci_2077 PF13361 UvrD-like helicase C-terminal domain Aaci_2077 PF12705 PD-(D/E)XK nuclease superfamily Aaci_2078 PF07690 Major Facilitator Superfamily Aaci_2079 PF00795 Carbon-nitrogen hydrolase Aaci_2080 PF00324 Amino acid permease Aaci_2081 PF00202 Aminotransferase class-III Aaci_2082 PF00158 Sigma-54 interaction domain Aaci_2082 PF00989 PAS fold Aaci_2082 PF02954 Bacterial regulatory protein, Fis family Aaci_2083 PF01207 Dihydrouridine synthase (Dus) Aaci_2085 PF00768 D-alanyl-D-alanine carboxypeptidase Aaci_2085 PF07943 Penicillin-binding protein 5, C-terminal domain Aaci_2086 PF01325 Iron dependent repressor, N-terminal DNA binding domain Aaci_2086 PF02742 Iron dependent repressor, metal binding and dimerisation domain Aaci_2086 PF18357 Diphteria toxin repressor SH3 domain Aaci_2087 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aaci_2088 PF06491 Disulphide isomerase Aaci_2089 PF01208 Uroporphyrinogen decarboxylase (URO-D) Aaci_2093 PF01925 Sulfite exporter TauE/SafE Aaci_2094 PF03707 Bacterial signalling protein N terminal repeat Aaci_2094 PF00563 EAL domain Aaci_2094 PF00990 Diguanylate cyclase, GGDEF domain Aaci_2096 PF02580 D-Tyr-tRNA(Tyr) deacylase Aaci_2097 PF02824 TGS domain Aaci_2097 PF13291 ACT domain Aaci_2097 PF04607 Region found in RelA / SpoT proteins Aaci_2098 PF00156 Phosphoribosyl transferase domain Aaci_2099 PF17768 RecJ OB domain Aaci_2099 PF02272 DHHA1 domain Aaci_2099 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Aaci_2099 PF01368 DHH family Aaci_2100 PF16916 Dimerisation domain of Zinc Transporter Aaci_2100 PF01545 Cation efflux family Aaci_2101 PF02355 Protein export membrane protein Aaci_2102 PF02355 Protein export membrane protein Aaci_2103 PF13797 Post-transcriptional regulator Aaci_2104 PF14667 Polysaccharide biosynthesis C-terminal domain Aaci_2104 PF01943 Polysaccharide biosynthesis protein Aaci_2106 PF00990 Diguanylate cyclase, GGDEF domain Aaci_2106 PF00563 EAL domain Aaci_2106 PF00360 Phytochrome region Aaci_2106 PF01590 GAF domain Aaci_2110 PF02547 Queuosine biosynthesis protein Aaci_2112 PF04542 Sigma-70 region 2 Aaci_2113 PF05491 RuvB C-terminal winged helix domain Aaci_2113 PF17864 RuvB AAA lid domain Aaci_2113 PF05496 Holliday junction DNA helicase RuvB P-loop domain Aaci_2114 PF07499 RuvA, C-terminal domain Aaci_2114 PF01330 RuvA N terminal domain Aaci_2115 PF02075 Crossover junction endodeoxyribonuclease RuvC Aaci_2117 PF01709 Transcriptional regulator Aaci_2118 PF02540 NAD synthase Aaci_2119 PF02540 NAD synthase Aaci_2119 PF00795 Carbon-nitrogen hydrolase Aaci_2123 PF01479 S4 domain Aaci_2123 PF00579 tRNA synthetases class I (W and Y) Aaci_2124 PF00905 Penicillin binding protein transpeptidase domain Aaci_2124 PF00912 Transglycosylase Aaci_2125 PF00488 MutS domain V Aaci_2125 PF01713 Smr domain Aaci_2128 PF05164 Cell division protein ZapA Aaci_2129 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Aaci_2129 PF01588 Putative tRNA binding domain Aaci_2129 PF03147 Ferredoxin-fold anticodon binding domain Aaci_2129 PF03483 B3/4 domain Aaci_2129 PF03484 tRNA synthetase B5 domain Aaci_2130 PF01409 tRNA synthetases class II core domain (F) Aaci_2130 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Aaci_2132 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Aaci_2132 PF02222 ATP-grasp domain Aaci_2133 PF00731 AIR carboxylase Aaci_2134 PF01791 DeoC/LacD family aldolase Aaci_2135 PF00365 Phosphofructokinase Aaci_2136 PF00311 Phosphoenolpyruvate carboxylase Aaci_2137 PF02743 Cache domain Aaci_2137 PF00672 HAMP domain Aaci_2137 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aaci_2138 PF00381 PTS HPr component phosphorylation site Aaci_2139 PF17912 MalK OB fold domain Aaci_2139 PF00005 ABC transporter Aaci_2139 PF03459 TOBE domain Aaci_2141 PF00390 Malic enzyme, N-terminal domain Aaci_2141 PF03949 Malic enzyme, NAD binding domain Aaci_2142 PF06039 Malate:quinone oxidoreductase (Mqo) Aaci_2143 PF02817 e3 binding domain Aaci_2143 PF00364 Biotin-requiring enzyme Aaci_2143 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Aaci_2144 PF02779 Transketolase, pyrimidine binding domain Aaci_2144 PF16870 2-oxoglutarate dehydrogenase C-terminal Aaci_2144 PF00676 Dehydrogenase E1 component Aaci_2144 PF16078 2-oxoglutarate dehydrogenase N-terminus Aaci_2146 PF17863 AAA lid domain Aaci_2146 PF07726 ATPase family associated with various cellular activities (AAA) Aaci_2149 PF01238 Phosphomannose isomerase type I Aaci_2150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Aaci_2150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Aaci_2152 PF00892 EamA-like transporter family Aaci_2153 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Aaci_2153 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Aaci_2154 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Aaci_2154 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Aaci_2155 PF01261 Xylose isomerase-like TIM barrel Aaci_2160 PF12105 SpoU, rRNA methylase, C-terminal Aaci_2160 PF00588 SpoU rRNA Methylase family Aaci_2161 PF13536 Putative multidrug resistance efflux transporter Aaci_2162 PF00583 Acetyltransferase (GNAT) family Aaci_2162 PF00814 Glycoprotease family Aaci_2163 PF00561 alpha/beta hydrolase fold Aaci_2164 PF00324 Amino acid permease Aaci_2165 PF05067 Manganese containing catalase Aaci_2166 PF12652 CotJB protein Aaci_2168 PF02681 Divergent PAP2 family Aaci_2169 PF00588 SpoU rRNA Methylase family Aaci_2169 PF08032 RNA 2'-O ribose methyltransferase substrate binding Aaci_2170 PF00453 Ribosomal protein L20 Aaci_2171 PF01632 Ribosomal protein L35 Aaci_2172 PF00707 Translation initiation factor IF-3, C-terminal domain Aaci_2172 PF05198 Translation initiation factor IF-3, N-terminal domain Aaci_2173 PF04143 Sulphur transport Aaci_2175 PF03129 Anticodon binding domain Aaci_2175 PF02824 TGS domain Aaci_2175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Aaci_2175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Aaci_2179 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Aaci_2179 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Aaci_2180 PF01261 Xylose isomerase-like TIM barrel Aaci_2181 PF07690 Major Facilitator Superfamily Aaci_2182 PF00149 Calcineurin-like phosphoesterase Aaci_2186 PF00106 short chain dehydrogenase Aaci_2188 PF00860 Permease family Aaci_2190 PF01566 Natural resistance-associated macrophage protein Aaci_2197 PF00313 'Cold-shock' DNA-binding domain Aaci_2200 PF00248 Aldo/keto reductase family Aaci_2201 PF02040 Arsenical pump membrane protein Aaci_2204 PF00474 Sodium:solute symporter family Aaci_2205 PF00248 Aldo/keto reductase family Aaci_2206 PF01261 Xylose isomerase-like TIM barrel Aaci_2208 PF01329 Pterin 4 alpha carbinolamine dehydratase Aaci_2211 PF02675 S-adenosylmethionine decarboxylase Aaci_2215 PF12704 MacB-like periplasmic core domain Aaci_2215 PF02687 FtsX-like permease family Aaci_2216 PF00005 ABC transporter Aaci_2219 PF00571 CBS domain Aaci_2220 PF00269 Small, acid-soluble spore proteins, alpha/beta type Aaci_2221 PF00285 Citrate synthase, C-terminal domain Aaci_2222 PF02659 Putative manganese efflux pump Aaci_2223 PF02875 Mur ligase family, glutamate ligase domain Aaci_2223 PF08245 Mur ligase middle domain Aaci_2224 PF00694 Aconitase C-terminal domain Aaci_2225 PF00330 Aconitase family (aconitate hydratase) Aaci_2226 PF00180 Isocitrate/isopropylmalate dehydrogenase Aaci_2227 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Aaci_2227 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Aaci_2228 PF01842 ACT domain Aaci_2228 PF10369 Small subunit of acetolactate synthase Aaci_2229 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Aaci_2229 PF00205 Thiamine pyrophosphate enzyme, central domain Aaci_2229 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Aaci_2230 PF00920 Dehydratase family Aaci_2232 PF01063 Amino-transferase class IV Aaci_2233 PF03447 Homoserine dehydrogenase, NAD binding domain Aaci_2233 PF00742 Homoserine dehydrogenase Aaci_2233 PF01842 ACT domain Aaci_2234 PF00294 pfkB family carbohydrate kinase Aaci_2235 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2236 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2237 PF01547 Bacterial extracellular solute-binding protein Aaci_2238 PF00356 Bacterial regulatory proteins, lacI family Aaci_2241 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2242 PF10417 C-terminal domain of 1-Cys peroxiredoxin Aaci_2242 PF00578 AhpC/TSA family Aaci_2243 PF02082 Transcriptional regulator Aaci_2245 PF01476 LysM domain Aaci_2245 PF00704 Glycosyl hydrolases family 18 Aaci_2247 PF00324 Amino acid permease Aaci_2254 PF00664 ABC transporter transmembrane region Aaci_2254 PF00005 ABC transporter Aaci_2255 PF00005 ABC transporter Aaci_2255 PF00664 ABC transporter transmembrane region Aaci_2258 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_2259 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2260 PF12911 N-terminal TM domain of oligopeptide transport permease C Aaci_2260 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2261 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_2262 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aaci_2262 PF00005 ABC transporter Aaci_2263 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aaci_2263 PF00005 ABC transporter Aaci_2264 PF00486 Transcriptional regulatory protein, C terminal Aaci_2264 PF00072 Response regulator receiver domain Aaci_2265 PF00512 His Kinase A (phospho-acceptor) domain Aaci_2265 PF18698 Histidine kinase sensor domain Aaci_2265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_2265 PF00672 HAMP domain Aaci_2267 PF00512 His Kinase A (phospho-acceptor) domain Aaci_2267 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_2267 PF18719 ArlS sensor domain Aaci_2268 PF00486 Transcriptional regulatory protein, C terminal Aaci_2268 PF00072 Response regulator receiver domain Aaci_2269 PF03466 LysR substrate binding domain Aaci_2269 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aaci_2270 PF00709 Adenylosuccinate synthetase Aaci_2271 PF03372 Endonuclease/Exonuclease/phosphatase family Aaci_2273 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Aaci_2273 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Aaci_2274 PF04198 Putative sugar-binding domain Aaci_2275 PF00485 Phosphoribulokinase / Uridine kinase family Aaci_2276 PF00294 pfkB family carbohydrate kinase Aaci_2277 PF13407 Periplasmic binding protein domain Aaci_2278 PF02653 Branched-chain amino acid transport system / permease component Aaci_2279 PF00005 ABC transporter Aaci_2280 PF05025 RbsD / FucU transport protein family Aaci_2281 PF00356 Bacterial regulatory proteins, lacI family Aaci_2282 PF00005 ABC transporter Aaci_2282 PF00664 ABC transporter transmembrane region Aaci_2283 PF00005 ABC transporter Aaci_2283 PF00664 ABC transporter transmembrane region Aaci_2284 PF12833 Helix-turn-helix domain Aaci_2284 PF10114 Sensory domain found in PocR Aaci_2286 PF01641 SelR domain Aaci_2288 PF00459 Inositol monophosphatase family Aaci_2289 PF03786 D-mannonate dehydratase (UxuA) Aaci_2290 PF02581 Thiamine monophosphate synthase Aaci_2291 PF00294 pfkB family carbohydrate kinase Aaci_2292 PF02595 Glycerate kinase family Aaci_2302 PF07690 Major Facilitator Superfamily Aaci_2304 PF00480 ROK family Aaci_2304 PF01047 MarR family Aaci_2305 PF00672 HAMP domain Aaci_2305 PF02743 Cache domain Aaci_2305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aaci_2306 PF01547 Bacterial extracellular solute-binding protein Aaci_2307 PF00795 Carbon-nitrogen hydrolase Aaci_2309 PF03069 Acetamidase/Formamidase family Aaci_2316 PF17941 Polyphosphate kinase C-terminal domain 1 Aaci_2316 PF02503 Polyphosphate kinase middle domain Aaci_2316 PF13090 Polyphosphate kinase C-terminal domain 2 Aaci_2316 PF13089 Polyphosphate kinase N-terminal domain Aaci_2319 PF07690 Major Facilitator Superfamily Aaci_2323 PF08220 DeoR-like helix-turn-helix domain Aaci_2323 PF00455 DeoR C terminal sensor domain Aaci_2324 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Aaci_2324 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Aaci_2325 PF00288 GHMP kinases N terminal domain Aaci_2325 PF08544 GHMP kinases C terminal Aaci_2325 PF10509 Galactokinase galactose-binding signature Aaci_2328 PF00331 Glycosyl hydrolase family 10 Aaci_2330 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_2330 PF00107 Zinc-binding dehydrogenase Aaci_2331 PF00924 Mechanosensitive ion channel Aaci_2332 PF00905 Penicillin binding protein transpeptidase domain Aaci_2332 PF03717 Penicillin-binding Protein dimerisation domain Aaci_2338 PF02898 Nitric oxide synthase, oxygenase domain Aaci_2339 PF01145 SPFH domain / Band 7 family Aaci_2341 PF08279 HTH domain Aaci_2341 PF02829 3H domain Aaci_2342 PF01464 Transglycosylase SLT domain Aaci_2342 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Aaci_2343 PF01121 Dephospho-CoA kinase Aaci_2344 PF06827 Zinc finger found in FPG and IleRS Aaci_2344 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Aaci_2344 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Aaci_2345 PF01367 5'-3' exonuclease, C-terminal SAM fold Aaci_2345 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Aaci_2345 PF00476 DNA polymerase family A Aaci_2346 PF01817 Chorismate mutase type II Aaci_2346 PF00800 Prephenate dehydratase Aaci_2346 PF01842 ACT domain Aaci_2347 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Aaci_2347 PF00056 lactate/malate dehydrogenase, NAD binding domain Aaci_2348 PF00180 Isocitrate/isopropylmalate dehydrogenase Aaci_2350 PF00486 Transcriptional regulatory protein, C terminal Aaci_2350 PF00072 Response regulator receiver domain Aaci_2351 PF00579 tRNA synthetases class I (W and Y) Aaci_2352 PF00391 PEP-utilising enzyme, mobile domain Aaci_2352 PF00224 Pyruvate kinase, barrel domain Aaci_2352 PF02887 Pyruvate kinase, alpha/beta domain Aaci_2353 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Aaci_2354 PF01039 Carboxyl transferase domain Aaci_2354 PF17848 Acetyl-coA carboxylase zinc finger domain Aaci_2356 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Aaci_2356 PF14579 Helix-hairpin-helix motif Aaci_2356 PF02811 PHP domain Aaci_2356 PF01336 OB-fold nucleic acid binding domain Aaci_2356 PF07733 Bacterial DNA polymerase III alpha NTPase domain Aaci_2357 PF00571 CBS domain Aaci_2357 PF00392 Bacterial regulatory proteins, gntR family Aaci_2357 PF07085 DRTGG domain Aaci_2357 PF03061 Thioesterase superfamily Aaci_2358 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Aaci_2358 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Aaci_2362 PF00291 Pyridoxal-phosphate dependent enzyme Aaci_2363 PF01316 Arginine repressor, DNA binding domain Aaci_2363 PF02863 Arginine repressor, C-terminal domain Aaci_2364 PF11799 impB/mucB/samB family C-terminal domain Aaci_2364 PF11798 IMS family HHH motif Aaci_2364 PF00817 impB/mucB/samB family Aaci_2369 PF06133 Control of competence regulator ComK, YlbF/YmcA Aaci_2370 PF01152 Bacterial-like globin Aaci_2372 PF06508 Queuosine biosynthesis protein QueC Aaci_2374 PF08264 Anticodon-binding domain of tRNA Aaci_2374 PF00133 tRNA synthetases class I (I, L, M and V) Aaci_2375 PF00561 alpha/beta hydrolase fold Aaci_2375 PF08386 TAP-like protein Aaci_2376 PF00132 Bacterial transferase hexapeptide (six repeats) Aaci_2377 PF07687 Peptidase dimerisation domain Aaci_2377 PF01546 Peptidase family M20/M25/M40 Aaci_2378 PF08222 CodY helix-turn-helix domain Aaci_2378 PF06018 CodY GAF-like domain Aaci_2379 PF01371 Trp repressor protein Aaci_2381 PF07732 Multicopper oxidase Aaci_2381 PF07731 Multicopper oxidase Aaci_2381 PF00394 Multicopper oxidase Aaci_2384 PF01381 Helix-turn-helix Aaci_2390 PF09180 Prolyl-tRNA synthetase, C-terminal Aaci_2390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Aaci_2390 PF03129 Anticodon binding domain Aaci_2394 PF00107 Zinc-binding dehydrogenase Aaci_2394 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_2395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_2395 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_2395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_2396 PF13193 AMP-binding enzyme C-terminal domain Aaci_2396 PF00501 AMP-binding enzyme Aaci_2397 PF00550 Phosphopantetheine attachment site Aaci_2399 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_2399 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Aaci_2400 PF13193 AMP-binding enzyme C-terminal domain Aaci_2400 PF00501 AMP-binding enzyme Aaci_2401 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_2401 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_2401 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_2402 PF00793 DAHP synthetase I family Aaci_2402 PF18152 DAHP synthase ferredoxin-like domain Aaci_2404 PF01476 LysM domain Aaci_2404 PF03734 L,D-transpeptidase catalytic domain Aaci_2406 PF02080 TrkA-C domain Aaci_2406 PF00999 Sodium/hydrogen exchanger family Aaci_2406 PF03471 Transporter associated domain Aaci_2413 PF02801 Beta-ketoacyl synthase, C-terminal domain Aaci_2413 PF00109 Beta-ketoacyl synthase, N-terminal domain Aaci_2415 PF00248 Aldo/keto reductase family Aaci_2417 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aaci_2417 PF00672 HAMP domain Aaci_2417 PF02743 Cache domain Aaci_2419 PF00551 Formyl transferase Aaci_2419 PF01842 ACT domain Aaci_2422 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Aaci_2423 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Aaci_2423 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Aaci_2424 PF01507 Phosphoadenosine phosphosulfate reductase family Aaci_2427 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Aaci_2427 PF10414 Sirohaem synthase dimerisation region Aaci_2428 PF07690 Major Facilitator Superfamily Aaci_2431 PF00535 Glycosyl transferase family 2 Aaci_2432 PF00877 NlpC/P60 family Aaci_2432 PF08239 Bacterial SH3 domain Aaci_2432 PF01476 LysM domain Aaci_2433 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) Aaci_2435 PF03845 Spore germination protein Aaci_2437 PF05504 Spore germination B3/ GerAC like, C-terminal Aaci_2438 PF03323 Bacillus/Clostridium GerA spore germination protein Aaci_2439 PF13180 PDZ domain Aaci_2443 PF13243 Squalene-hopene cyclase C-terminal domain Aaci_2443 PF13249 Squalene-hopene cyclase N-terminal domain Aaci_2444 PF01370 NAD dependent epimerase/dehydratase family Aaci_2446 PF04055 Radical SAM superfamily Aaci_2446 PF06463 Molybdenum Cofactor Synthesis C Aaci_2447 PF01070 FMN-dependent dehydrogenase Aaci_2448 PF02779 Transketolase, pyrimidine binding domain Aaci_2448 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Aaci_2448 PF02780 Transketolase, C-terminal domain Aaci_2452 PF00501 AMP-binding enzyme Aaci_2452 PF01553 Acyltransferase Aaci_2455 PF00394 Multicopper oxidase Aaci_2455 PF07731 Multicopper oxidase Aaci_2455 PF07732 Multicopper oxidase Aaci_2456 PF07732 Multicopper oxidase Aaci_2456 PF07731 Multicopper oxidase Aaci_2457 PF00295 Glycosyl hydrolases family 28 Aaci_2458 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2459 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2462 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Aaci_2462 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Aaci_2463 PF00356 Bacterial regulatory proteins, lacI family Aaci_2464 PF01613 Flavin reductase like domain Aaci_2467 PF00120 Glutamine synthetase, catalytic domain Aaci_2467 PF03951 Glutamine synthetase, beta-Grasp domain Aaci_2468 PF00909 Ammonium Transporter Family Aaci_2469 PF13419 Haloacid dehalogenase-like hydrolase Aaci_2470 PF00005 ABC transporter Aaci_2470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aaci_2471 PF00005 ABC transporter Aaci_2471 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aaci_2472 PF12911 N-terminal TM domain of oligopeptide transport permease C Aaci_2472 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2473 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2474 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_2475 PF00759 Glycosyl hydrolase family 9 Aaci_2475 PF02927 Cellulase N-terminal ig-like domain Aaci_2476 PF02445 Quinolinate synthetase A protein Aaci_2477 PF02910 Fumarate reductase flavoprotein C-term Aaci_2477 PF00890 FAD binding domain Aaci_2478 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Aaci_2478 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Aaci_2480 PF00899 ThiF family Aaci_2481 PF05690 Thiazole biosynthesis protein ThiG Aaci_2483 PF01266 FAD dependent oxidoreductase Aaci_2484 PF02581 Thiamine monophosphate synthase Aaci_2485 PF01368 DHH family Aaci_2485 PF02833 DHHA2 domain Aaci_2487 PF07690 Major Facilitator Superfamily Aaci_2490 PF13171 Protein of unknown function (DUF4004) Aaci_2491 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_2492 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_2494 PF01370 NAD dependent epimerase/dehydratase family Aaci_2494 PF08338 Domain of unknown function (DUF1731) Aaci_2495 PF07690 Major Facilitator Superfamily Aaci_2501 PF01965 DJ-1/PfpI family Aaci_2502 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aaci_2503 PF13520 Amino acid permease Aaci_2504 PF00171 Aldehyde dehydrogenase family Aaci_2509 PF13181 Tetratricopeptide repeat Aaci_2509 PF00535 Glycosyl transferase family 2 Aaci_2511 PF03466 LysR substrate binding domain Aaci_2511 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aaci_2513 PF00239 Resolvase, N terminal domain Aaci_2514 PF01385 Probable transposase Aaci_2514 PF12323 Helix-turn-helix domain Aaci_2514 PF07282 Putative transposase DNA-binding domain Aaci_2515 PF07690 Major Facilitator Superfamily Aaci_2517 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_2517 PF00107 Zinc-binding dehydrogenase Aaci_2518 PF13192 Thioredoxin domain Aaci_2518 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_2519 PF00578 AhpC/TSA family Aaci_2520 PF01475 Ferric uptake regulator family Aaci_2521 PF00561 alpha/beta hydrolase fold Aaci_2523 PF00324 Amino acid permease Aaci_2524 PF01619 Proline dehydrogenase Aaci_2525 PF00158 Sigma-54 interaction domain Aaci_2525 PF02954 Bacterial regulatory protein, Fis family Aaci_2526 PF02913 FAD linked oxidases, C-terminal domain Aaci_2526 PF01565 FAD binding domain Aaci_2527 PF07690 Major Facilitator Superfamily Aaci_2528 PF12146 Serine aminopeptidase, S33 Aaci_2529 PF02652 L-lactate permease Aaci_2530 PF01274 Malate synthase Aaci_2531 PF09339 IclR helix-turn-helix domain Aaci_2531 PF01614 Bacterial transcriptional regulator Aaci_2532 PF01565 FAD binding domain Aaci_2532 PF02913 FAD linked oxidases, C-terminal domain Aaci_2533 PF02754 Cysteine-rich domain Aaci_2533 PF13183 4Fe-4S dicluster domain Aaci_2534 PF02913 FAD linked oxidases, C-terminal domain Aaci_2534 PF01565 FAD binding domain Aaci_2535 PF00535 Glycosyl transferase family 2 Aaci_2538 PF01022 Bacterial regulatory protein, arsR family Aaci_2546 PF17864 RuvB AAA lid domain Aaci_2546 PF05496 Holliday junction DNA helicase RuvB P-loop domain Aaci_2546 PF05491 RuvB C-terminal winged helix domain Aaci_2550 PF04199 Putative cyclase Aaci_2551 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Aaci_2551 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Aaci_2553 PF07516 SecA Wing and Scaffold domain Aaci_2553 PF01043 SecA preprotein cross-linking domain Aaci_2553 PF07517 SecA DEAD-like domain Aaci_2553 PF02810 SEC-C motif Aaci_2554 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Aaci_2554 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Aaci_2557 PF00535 Glycosyl transferase family 2 Aaci_2559 PF00535 Glycosyl transferase family 2 Aaci_2559 PF13181 Tetratricopeptide repeat Aaci_2560 PF07195 Flagellar hook-associated protein 2 C-terminus Aaci_2560 PF07196 Flagellin hook IN motif Aaci_2560 PF02465 Flagellar hook-associated protein 2 N-terminus Aaci_2561 PF00669 Bacterial flagellin N-terminal helical region Aaci_2561 PF07196 Flagellin hook IN motif Aaci_2561 PF00700 Bacterial flagellin C-terminal helical region Aaci_2562 PF00669 Bacterial flagellin N-terminal helical region Aaci_2562 PF00700 Bacterial flagellin C-terminal helical region Aaci_2568 PF00156 Phosphoribosyl transferase domain Aaci_2569 PF16736 Single Cache-like Aaci_2569 PF00989 PAS fold Aaci_2569 PF00512 His Kinase A (phospho-acceptor) domain Aaci_2569 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_2570 PF00072 Response regulator receiver domain Aaci_2570 PF00486 Transcriptional regulatory protein, C terminal Aaci_2573 PF00196 Bacterial regulatory proteins, luxR family Aaci_2573 PF00072 Response regulator receiver domain Aaci_2574 PF02773 S-adenosylmethionine synthetase, C-terminal domain Aaci_2574 PF02772 S-adenosylmethionine synthetase, central domain Aaci_2574 PF00438 S-adenosylmethionine synthetase, N-terminal domain Aaci_2575 PF03808 Glycosyl transferase WecB/TagA/CpsF family Aaci_2577 PF07690 Major Facilitator Superfamily Aaci_2578 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Aaci_2578 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Aaci_2578 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Aaci_2578 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Aaci_2579 PF01425 Amidase Aaci_2580 PF01967 MoaC family Aaci_2580 PF00994 Probable molybdopterin binding domain Aaci_2581 PF14748 Pyrroline-5-carboxylate reductase dimerisation Aaci_2581 PF03807 NADP oxidoreductase coenzyme F420-dependent Aaci_2582 PF12146 Serine aminopeptidase, S33 Aaci_2585 PF02567 Phenazine biosynthesis-like protein Aaci_2586 PF03109 ABC1 family Aaci_2588 PF01479 S4 domain Aaci_2588 PF00849 RNA pseudouridylate synthase Aaci_2592 PF02424 ApbE family Aaci_2594 PF00356 Bacterial regulatory proteins, lacI family Aaci_2595 PF00248 Aldo/keto reductase family Aaci_2596 PF02683 Cytochrome C biogenesis protein transmembrane region Aaci_2597 PF08534 Redoxin Aaci_2599 PF13472 GDSL-like Lipase/Acylhydrolase family Aaci_2601 PF02424 ApbE family Aaci_2605 PF07690 Major Facilitator Superfamily Aaci_2606 PF02569 Pantoate-beta-alanine ligase Aaci_2607 PF02548 Ketopantoate hydroxymethyltransferase Aaci_2610 PF07690 Major Facilitator Superfamily Aaci_2612 PF01475 Ferric uptake regulator family Aaci_2613 PF01297 Zinc-uptake complex component A periplasmic Aaci_2614 PF00005 ABC transporter Aaci_2617 PF03061 Thioesterase superfamily Aaci_2618 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Aaci_2618 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Aaci_2620 PF00563 EAL domain Aaci_2620 PF03707 Bacterial signalling protein N terminal repeat Aaci_2620 PF00990 Diguanylate cyclase, GGDEF domain Aaci_2621 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Aaci_2621 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Aaci_2624 PF13115 YtkA-like Aaci_2624 PF05425 Copper resistance protein D Aaci_2624 PF04234 CopC domain Aaci_2625 PF07987 Domain of unkown function (DUF1775) Aaci_2626 PF01384 Phosphate transporter family Aaci_2629 PF01047 MarR family Aaci_2629 PF00480 ROK family Aaci_2630 PF00933 Glycosyl hydrolase family 3 N terminal domain Aaci_2630 PF01915 Glycosyl hydrolase family 3 C-terminal domain Aaci_2630 PF14310 Fibronectin type III-like domain Aaci_2631 PF01569 PAP2 superfamily Aaci_2634 PF04542 Sigma-70 region 2 Aaci_2634 PF08281 Sigma-70, region 4 Aaci_2639 PF02583 Metal-sensitive transcriptional repressor Aaci_2640 PF01925 Sulfite exporter TauE/SafE Aaci_2641 PF00753 Metallo-beta-lactamase superfamily Aaci_2641 PF00581 Rhodanese-like domain Aaci_2642 PF01206 Sulfurtransferase TusA Aaci_2642 PF00581 Rhodanese-like domain Aaci_2643 PF13686 DsrE/DsrF/DrsH-like family Aaci_2644 PF00581 Rhodanese-like domain Aaci_2645 PF01925 Sulfite exporter TauE/SafE Aaci_2650 PF09827 CRISPR associated protein Cas2 Aaci_2651 PF01867 CRISPR associated protein Cas1 Aaci_2653 PF01964 Radical SAM ThiC family Aaci_2653 PF13667 ThiC-associated domain Aaci_2656 PF02086 D12 class N6 adenine-specific DNA methyltransferase Aaci_2657 PF00403 Heavy-metal-associated domain Aaci_2658 PF02583 Metal-sensitive transcriptional repressor Aaci_2659 PF03780 Asp23 family, cell envelope-related function Aaci_2662 PF03780 Asp23 family, cell envelope-related function Aaci_2663 PF01037 Lrp/AsnC ligand binding domain Aaci_2664 PF00155 Aminotransferase class I and II Aaci_2666 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_2666 PF00107 Zinc-binding dehydrogenase Aaci_2667 PF00440 Bacterial regulatory proteins, tetR family Aaci_2668 PF00202 Aminotransferase class-III Aaci_2669 PF01380 SIS domain Aaci_2670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Aaci_2670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Aaci_2670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Aaci_2670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Aaci_2671 PF07949 YbbR-like protein Aaci_2672 PF02457 DisA bacterial checkpoint controller nucleotide-binding Aaci_2674 PF01522 Polysaccharide deacetylase Aaci_2676 PF10609 NUBPL iron-transfer P-loop NTPase Aaci_2678 PF01520 N-acetylmuramoyl-L-alanine amidase Aaci_2679 PF00380 Ribosomal protein S9/S16 Aaci_2680 PF00572 Ribosomal protein L13 Aaci_2681 PF01416 tRNA pseudouridine synthase Aaci_2682 PF01196 Ribosomal protein L17 Aaci_2683 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Aaci_2683 PF01000 RNA polymerase Rpb3/RpoA insert domain Aaci_2683 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Aaci_2684 PF01479 S4 domain Aaci_2684 PF00163 Ribosomal protein S4/S9 N-terminal domain Aaci_2685 PF00411 Ribosomal protein S11 Aaci_2686 PF00416 Ribosomal protein S13/S18 Aaci_2687 PF00444 Ribosomal protein L36 Aaci_2688 PF01176 Translation initiation factor 1A / IF-1 Aaci_2690 PF05191 Adenylate kinase, active site lid Aaci_2691 PF00344 SecY translocase Aaci_2692 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Aaci_2693 PF00327 Ribosomal protein L30p/L7e Aaci_2694 PF03719 Ribosomal protein S5, C-terminal domain Aaci_2694 PF00333 Ribosomal protein S5, N-terminal domain Aaci_2695 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Aaci_2696 PF00347 Ribosomal protein L6 Aaci_2697 PF00410 Ribosomal protein S8 Aaci_2698 PF00253 Ribosomal protein S14p/S29e Aaci_2699 PF00673 ribosomal L5P family C-terminus Aaci_2699 PF00281 Ribosomal protein L5 Aaci_2700 PF00467 KOW motif Aaci_2700 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Aaci_2701 PF00238 Ribosomal protein L14p/L23e Aaci_2702 PF00366 Ribosomal protein S17 Aaci_2703 PF00831 Ribosomal L29 protein Aaci_2704 PF00252 Ribosomal protein L16p/L10e Aaci_2705 PF00189 Ribosomal protein S3, C-terminal domain Aaci_2705 PF07650 KH domain Aaci_2706 PF00237 Ribosomal protein L22p/L17e Aaci_2707 PF00203 Ribosomal protein S19 Aaci_2708 PF00181 Ribosomal Proteins L2, RNA binding domain Aaci_2708 PF03947 Ribosomal Proteins L2, C-terminal domain Aaci_2709 PF00276 Ribosomal protein L23 Aaci_2710 PF00573 Ribosomal protein L4/L1 family Aaci_2711 PF00297 Ribosomal protein L3 Aaci_2712 PF00338 Ribosomal protein S10p/S20e Aaci_2713 PF00009 Elongation factor Tu GTP binding domain Aaci_2713 PF03143 Elongation factor Tu C-terminal domain Aaci_2713 PF03144 Elongation factor Tu domain 2 Aaci_2714 PF00009 Elongation factor Tu GTP binding domain Aaci_2714 PF03144 Elongation factor Tu domain 2 Aaci_2714 PF03764 Elongation factor G, domain IV Aaci_2714 PF00679 Elongation factor G C-terminus Aaci_2714 PF14492 Elongation Factor G, domain II Aaci_2715 PF00177 Ribosomal protein S7p/S5e Aaci_2716 PF00164 Ribosomal protein S12/S23 Aaci_2717 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Aaci_2718 PF04997 RNA polymerase Rpb1, domain 1 Aaci_2718 PF04983 RNA polymerase Rpb1, domain 3 Aaci_2718 PF00623 RNA polymerase Rpb1, domain 2 Aaci_2718 PF04998 RNA polymerase Rpb1, domain 5 Aaci_2718 PF05000 RNA polymerase Rpb1, domain 4 Aaci_2719 PF00562 RNA polymerase Rpb2, domain 6 Aaci_2719 PF10385 RNA polymerase beta subunit external 1 domain Aaci_2719 PF04565 RNA polymerase Rpb2, domain 3 Aaci_2719 PF04561 RNA polymerase Rpb2, domain 2 Aaci_2719 PF04563 RNA polymerase beta subunit Aaci_2719 PF04560 RNA polymerase Rpb2, domain 7 Aaci_2720 PF05175 Methyltransferase small domain Aaci_2722 PF00466 Ribosomal protein L10 Aaci_2723 PF00687 Ribosomal protein L1p/L10e family Aaci_2724 PF03946 Ribosomal protein L11, N-terminal domain Aaci_2724 PF00298 Ribosomal protein L11, RNA binding domain Aaci_2725 PF02357 Transcription termination factor nusG Aaci_2725 PF00467 KOW motif Aaci_2727 PF00471 Ribosomal protein L33 Aaci_2728 PF08281 Sigma-70, region 4 Aaci_2728 PF04542 Sigma-70 region 2 Aaci_2730 PF08032 RNA 2'-O ribose methyltransferase substrate binding Aaci_2730 PF00588 SpoU rRNA Methylase family Aaci_2731 PF00636 Ribonuclease III domain Aaci_2732 PF01406 tRNA synthetases class I (C) catalytic domain Aaci_2732 PF09190 DALR domain Aaci_2733 PF00749 tRNA synthetases class I (E and Q), catalytic domain Aaci_2734 PF02542 YgbB family Aaci_2735 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Aaci_2737 PF01066 CDP-alcohol phosphatidyltransferase Aaci_2738 PF10635 DisA bacterial checkpoint controller linker region Aaci_2738 PF02457 DisA bacterial checkpoint controller nucleotide-binding Aaci_2739 PF18073 Rubredoxin metal binding domain Aaci_2740 PF10431 C-terminal, D2-small domain, of ClpB protein Aaci_2740 PF17871 AAA lid domain Aaci_2740 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_2740 PF02861 Clp amino terminal domain, pathogenicity island component Aaci_2740 PF07724 AAA domain (Cdc48 subfamily) Aaci_2741 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain Aaci_2742 PF02151 UvrB/uvrC motif Aaci_2743 PF05848 CtsR N-terminal HTH domain Aaci_2743 PF17727 CtsR C-terminal dimerization domain Aaci_2745 PF07977 FabA-like domain Aaci_2746 PF01066 CDP-alcohol phosphatidyltransferase Aaci_2747 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aaci_2747 PF00460 Flagella basal body rod protein Aaci_2748 PF00460 Flagella basal body rod protein Aaci_2748 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aaci_2750 PF12116 Stage III sporulation protein D Aaci_2751 PF01551 Peptidase family M23 Aaci_2753 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Aaci_2756 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Aaci_2756 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Aaci_2757 PF02874 ATP synthase alpha/beta family, beta-barrel domain Aaci_2757 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aaci_2758 PF00231 ATP synthase Aaci_2759 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aaci_2759 PF00306 ATP synthase alpha/beta chain, C terminal domain Aaci_2759 PF02874 ATP synthase alpha/beta family, beta-barrel domain Aaci_2760 PF00213 ATP synthase delta (OSCP) subunit Aaci_2761 PF00430 ATP synthase B/B' CF(0) Aaci_2762 PF00137 ATP synthase subunit C Aaci_2763 PF00119 ATP synthase A chain Aaci_2766 PF02350 UDP-N-acetylglucosamine 2-epimerase Aaci_2768 PF00464 Serine hydroxymethyltransferase Aaci_2769 PF04260 Protein of unknown function (DUF436) Aaci_2770 PF01451 Low molecular weight phosphotyrosine protein phosphatase Aaci_2771 PF02659 Putative manganese efflux pump Aaci_2773 PF06912 Protein of unknown function (DUF1275) Aaci_2777 PF03481 Putative GTP-binding controlling metal-binding Aaci_2777 PF01300 Telomere recombination Aaci_2778 PF09551 Stage II sporulation protein R (spore_II_R) Aaci_2779 PF05175 Methyltransferase small domain Aaci_2779 PF17827 PrmC N-terminal domain Aaci_2780 PF03462 PCRF domain Aaci_2780 PF00472 RF-1 domain Aaci_2781 PF01197 Ribosomal protein L31 Aaci_2782 PF07497 Rho termination factor, RNA-binding domain Aaci_2782 PF07498 Rho termination factor, N-terminal domain Aaci_2782 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aaci_2783 PF00923 Transaldolase/Fructose-6-phosphate aldolase Aaci_2784 PF00072 Response regulator receiver domain Aaci_2785 PF00117 Glutamine amidotransferase class-I Aaci_2785 PF06418 CTP synthase N-terminus Aaci_2786 PF05066 HB1, ASXL, restriction endonuclease HTH domain Aaci_2787 PF00378 Enoyl-CoA hydratase/isomerase Aaci_2788 PF03746 LamB/YcsF family Aaci_2789 PF02626 Carboxyltransferase domain, subdomain A and B Aaci_2790 PF02682 Carboxyltransferase domain, subdomain C and D Aaci_2791 PF00535 Glycosyl transferase family 2 Aaci_2791 PF01501 Glycosyl transferase family 8 Aaci_2793 PF00491 Arginase family Aaci_2794 PF17284 Spermidine synthase tetramerisation domain Aaci_2795 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_2795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_2795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_2796 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_2796 PF00107 Zinc-binding dehydrogenase Aaci_2797 PF00912 Transglycosylase Aaci_2797 PF00905 Penicillin binding protein transpeptidase domain Aaci_2798 PF00155 Aminotransferase class I and II Aaci_2804 PF06463 Molybdenum Cofactor Synthesis C Aaci_2804 PF04055 Radical SAM superfamily Aaci_2805 PF02142 MGS-like domain Aaci_2806 PF05195 Aminopeptidase P, N-terminal domain Aaci_2806 PF00557 Metallopeptidase family M24 Aaci_2811 PF07690 Major Facilitator Superfamily Aaci_2812 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Aaci_2812 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Aaci_2814 PF01053 Cys/Met metabolism PLP-dependent enzyme Aaci_2815 PF03601 Conserved hypothetical protein 698 Aaci_2816 PF01494 FAD binding domain Aaci_2817 PF01227 GTP cyclohydrolase I Aaci_2818 PF00348 Polyprenyl synthetase Aaci_2820 PF01593 Flavin containing amine oxidoreductase Aaci_2821 PF00258 Flavodoxin Aaci_2821 PF00667 FAD binding domain Aaci_2821 PF00175 Oxidoreductase NAD-binding domain Aaci_2821 PF00067 Cytochrome P450 Aaci_2823 PF02660 Glycerol-3-phosphate acyltransferase Aaci_2824 PF00535 Glycosyl transferase family 2 Aaci_2827 PF02560 Cyanate lyase C-terminal domain Aaci_2828 PF12867 DinB superfamily Aaci_2830 PF00356 Bacterial regulatory proteins, lacI family Aaci_2831 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Aaci_2831 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Aaci_2832 PF01048 Phosphorylase superfamily Aaci_2833 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal Aaci_2833 PF00132 Bacterial transferase hexapeptide (six repeats) Aaci_2833 PF14602 Hexapeptide repeat of succinyl-transferase Aaci_2834 PF07687 Peptidase dimerisation domain Aaci_2834 PF01546 Peptidase family M20/M25/M40 Aaci_2836 PF00155 Aminotransferase class I and II Aaci_2840 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Aaci_2840 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Aaci_2841 PF08402 TOBE domain Aaci_2841 PF00005 ABC transporter Aaci_2842 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2843 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2845 PF00005 ABC transporter Aaci_2846 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2847 PF00296 Luciferase-like monooxygenase Aaci_2848 PF09084 NMT1/THI5 like Aaci_2849 PF03358 NADPH-dependent FMN reductase Aaci_2851 PF13411 MerR HTH family regulatory protein Aaci_2852 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_2852 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_2852 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_2854 PF04055 Radical SAM superfamily Aaci_2854 PF06968 Biotin and Thiamin Synthesis associated domain Aaci_2856 PF00155 Aminotransferase class I and II Aaci_2857 PF00202 Aminotransferase class-III Aaci_2858 PF01494 FAD binding domain Aaci_2859 PF03649 Uncharacterised protein family (UPF0014) Aaci_2860 PF00005 ABC transporter Aaci_2861 PF16884 N-terminal domain of oxidoreductase Aaci_2861 PF00107 Zinc-binding dehydrogenase Aaci_2865 PF02558 Ketopantoate reductase PanE/ApbA Aaci_2865 PF08546 Ketopantoate reductase PanE/ApbA C terminal Aaci_2867 PF00990 Diguanylate cyclase, GGDEF domain Aaci_2868 PF17137 Domain of unknown function (DUF5110) Aaci_2868 PF13802 Galactose mutarotase-like Aaci_2868 PF16338 Domain of unknown function (DUF4968) Aaci_2868 PF01055 Glycosyl hydrolases family 31 Aaci_2869 PF16657 Maltogenic Amylase, C-terminal domain Aaci_2869 PF02903 Alpha amylase, N-terminal ig-like domain Aaci_2869 PF00128 Alpha amylase, catalytic domain Aaci_2870 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Aaci_2870 PF00356 Bacterial regulatory proteins, lacI family Aaci_2871 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2872 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2873 PF01547 Bacterial extracellular solute-binding protein Aaci_2874 PF00395 S-layer homology domain Aaci_2874 PF02903 Alpha amylase, N-terminal ig-like domain Aaci_2874 PF00128 Alpha amylase, catalytic domain Aaci_2875 PF07859 alpha/beta hydrolase fold Aaci_2876 PF02678 Pirin Aaci_2876 PF05726 Pirin C-terminal cupin domain Aaci_2877 PF00293 NUDIX domain Aaci_2879 PF07690 Major Facilitator Superfamily Aaci_2884 PF00171 Aldehyde dehydrogenase family Aaci_2885 PF01472 PUA domain Aaci_2885 PF00696 Amino acid kinase family Aaci_2886 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aaci_2887 PF13802 Galactose mutarotase-like Aaci_2887 PF01055 Glycosyl hydrolases family 31 Aaci_2888 PF00582 Universal stress protein family Aaci_2889 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_2890 PF10114 Sensory domain found in PocR Aaci_2890 PF12833 Helix-turn-helix domain Aaci_2891 PF08532 Beta-galactosidase trimerisation domain Aaci_2891 PF08533 Beta-galactosidase C-terminal domain Aaci_2891 PF02449 Beta-galactosidase Aaci_2892 PF00909 Ammonium Transporter Family Aaci_2893 PF00543 Nitrogen regulatory protein P-II Aaci_2894 PF06964 Alpha-L-arabinofuranosidase C-terminal domain Aaci_2896 PF13685 Iron-containing alcohol dehydrogenase Aaci_2897 PF11762 L-arabinose isomerase C-terminal domain Aaci_2897 PF02610 L-arabinose isomerase Aaci_2898 PF00596 Class II Aldolase and Adducin N-terminal domain Aaci_2899 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Aaci_2899 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Aaci_2900 PF00083 Sugar (and other) transporter Aaci_2901 PF00392 Bacterial regulatory proteins, gntR family Aaci_2903 PF02653 Branched-chain amino acid transport system / permease component Aaci_2904 PF00005 ABC transporter Aaci_2905 PF00392 Bacterial regulatory proteins, gntR family Aaci_2907 PF07944 Beta-L-arabinofuranosidase, GH127 Aaci_2909 PF07690 Major Facilitator Superfamily Aaci_2911 PF00684 DnaJ central domain Aaci_2911 PF01556 DnaJ C terminal domain Aaci_2911 PF00226 DnaJ domain Aaci_2912 PF00106 short chain dehydrogenase Aaci_2915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aaci_2915 PF03466 LysR substrate binding domain Aaci_2916 PF02590 Predicted SPOUT methyltransferase Aaci_2917 PF13180 PDZ domain Aaci_2918 PF00753 Metallo-beta-lactamase superfamily Aaci_2921 PF00512 His Kinase A (phospho-acceptor) domain Aaci_2921 PF00672 HAMP domain Aaci_2921 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_2921 PF13426 PAS domain Aaci_2922 PF00486 Transcriptional regulatory protein, C terminal Aaci_2922 PF00072 Response regulator receiver domain Aaci_2924 PF03796 DnaB-like helicase C terminal domain Aaci_2924 PF00772 DnaB-like helicase N terminal domain Aaci_2925 PF03948 Ribosomal protein L9, C-terminal domain Aaci_2925 PF01281 Ribosomal protein L9, N-terminal domain Aaci_2928 PF01084 Ribosomal protein S18 Aaci_2929 PF00436 Single-strand binding protein family Aaci_2930 PF01250 Ribosomal protein S6 Aaci_2931 PF06071 Protein of unknown function (DUF933) Aaci_2931 PF01926 50S ribosome-binding GTPase Aaci_2933 PF00384 Molybdopterin oxidoreductase Aaci_2933 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Aaci_2933 PF01568 Molydopterin dinucleotide binding domain Aaci_2934 PF06107 Bacterial protein of unknown function (DUF951) Aaci_2935 PF00924 Mechanosensitive ion channel Aaci_2937 PF06866 Protein of unknown function (DUF1256) Aaci_2939 PF04474 Protein of unknown function (DUF554) Aaci_2940 PF02195 ParB-like nuclease domain Aaci_2940 PF17762 HTH domain found in ParB protein Aaci_2941 PF13614 AAA domain Aaci_2942 PF17762 HTH domain found in ParB protein Aaci_2942 PF02195 ParB-like nuclease domain Aaci_2943 PF02527 rRNA small subunit methyltransferase G Aaci_2944 PF01134 Glucose inhibited division protein A Aaci_2944 PF13932 GidA associated domain Aaci_2945 PF01926 50S ribosome-binding GTPase Aaci_2945 PF12631 MnmE helical domain Aaci_2945 PF10396 GTP-binding protein TrmE N-terminus Aaci_2946 PF14804 Jag N-terminus Aaci_2946 PF01424 R3H domain Aaci_2947 PF02096 60Kd inner membrane protein Aaci_2948 PF01809 Putative membrane protein insertion efficiency factor Aaci_2949 PF00825 Ribonuclease P Aaci_2950 PF00468 Ribosomal protein L34 Aaci_2967 PF01464 Transglycosylase SLT domain Aaci_2968 PF00072 Response regulator receiver domain Aaci_2979 PF13614 AAA domain Aaci_2987 PF00206 Lyase Aaci_2987 PF02655 ATP-grasp domain Aaci_2989 PF01209 ubiE/COQ5 methyltransferase family Aaci_2994 PF00583 Acetyltransferase (GNAT) family Aaci_2995 PF00589 Phage integrase family Aaci_3004 PF12826 Helix-hairpin-helix motif Aaci_3004 PF04002 RadC-like JAB domain Aaci_3005 PF02768 DNA polymerase III beta subunit, C-terminal domain Aaci_3005 PF02767 DNA polymerase III beta subunit, central domain Aaci_3005 PF00712 DNA polymerase III beta subunit, N-terminal domain Aaci_3009 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system Aaci_3011 PF00436 Single-strand binding protein family Aaci_3020 PF00271 Helicase conserved C-terminal domain Aaci_3020 PF04851 Type III restriction enzyme, res subunit Aaci_3021 PF00216 Bacterial DNA-binding protein Aaci_3023 PF00580 UvrD/REP helicase N-terminal domain Aaci_3023 PF13361 UvrD-like helicase C-terminal domain Aaci_3025 PF00817 impB/mucB/samB family Aaci_3025 PF11799 impB/mucB/samB family C-terminal domain Aaci_3032 PF18277 AbrB C-terminal domain Aaci_3032 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Aaci_3056 PF13817 IS66 C-terminal element Aaci_3056 PF13005 zinc-finger binding domain of transposase IS66 Aaci_3056 PF03050 Transposase IS66 family Aaci_3056 PF13007 Transposase C of IS166 homeodomain Aaci_3063 PF07883 Cupin domain Aaci_3063 PF01381 Helix-turn-helix Aaci_3065 PF03591 AzlC protein Aaci_3070 PF03323 Bacillus/Clostridium GerA spore germination protein Aaci_3076 PF13188 PAS domain Aaci_3076 PF03707 Bacterial signalling protein N terminal repeat Aaci_3076 PF00990 Diguanylate cyclase, GGDEF domain Aaci_3076 PF00563 EAL domain Aaci_3079 PF05384 Sensor protein DegS Aaci_3079 PF07730 Histidine kinase Aaci_3079 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_3086 PF01555 DNA methylase Aaci_3086 PF18273 Type III R-M EcoP15I C-terminal domain Aaci_3088 PF04542 Sigma-70 region 2 Aaci_3088 PF08281 Sigma-70, region 4 Aaci_3092 PF00196 Bacterial regulatory proteins, luxR family Aaci_3092 PF00072 Response regulator receiver domain Aaci_3118 PF10609 NUBPL iron-transfer P-loop NTPase Aaci_3120 PF00437 Type II/IV secretion system protein Aaci_3132 PF00872 Transposase, Mutator family