Aaci_0001 PF00308 Bacterial dnaA protein Aaci_0001 PF08299 Bacterial dnaA protein helix-turn-helix Aaci_0001 PF11638 DnaA N-terminal domain Aaci_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Aaci_0002 PF02767 DNA polymerase III beta subunit, central domain Aaci_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Aaci_0003 PF13275 S4 domain Aaci_0004 PF13476 AAA domain Aaci_0005 PF00204 DNA gyrase B Aaci_0005 PF00986 DNA gyrase B subunit, carboxyl terminus Aaci_0005 PF01751 Toprim domain Aaci_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0006 PF00521 DNA gyrase/topoisomerase IV, subunit A Aaci_0006 PF03989 DNA gyrase C-terminal domain, beta-propeller Aaci_0008 PF00583 Acetyltransferase (GNAT) family Aaci_0009 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Aaci_0011 PF00478 IMP dehydrogenase / GMP reductase domain Aaci_0011 PF00571 CBS domain Aaci_0012 PF01680 SOR/SNZ family Aaci_0013 PF01174 SNO glutamine amidotransferase family Aaci_0014 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Aaci_0014 PF02403 Seryl-tRNA synthetase N-terminal domain Aaci_0016 PF09818 Predicted ATPase of the ABC class Aaci_0018 PF00565 Staphylococcal nuclease homologue Aaci_0019 PF15919 Aaci_0019 Aaci_0022 PF00440 Bacterial regulatory proteins, tetR family Aaci_0023 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Aaci_0023 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Aaci_0024 PF03747 ADP-ribosylglycohydrolase Aaci_0026 PF13579 Glycosyl transferase 4-like domain Aaci_0026 PF13692 Glycosyl transferases group 1 Aaci_0027 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Aaci_0027 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Aaci_0027 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Aaci_0028 PF00463 Isocitrate lyase family Aaci_0029 PF07690 Major Facilitator Superfamily Aaci_0030 PF02653 Aaci_0030 Aaci_0031 PF02653 Aaci_0031 Aaci_0032 PF00005 ABC transporter Aaci_0033 PF02608 Basic membrane protein Aaci_0034 PF00857 Isochorismatase family Aaci_0035 PF00753 Metallo-beta-lactamase superfamily Aaci_0036 PF13279 Thioesterase-like superfamily Aaci_0039 PF00005 ABC transporter Aaci_0039 PF08402 TOBE domain Aaci_0041 PF13343 Bacterial extracellular solute-binding protein Aaci_0042 PF01061 Aaci_0042 Aaci_0043 PF00005 ABC transporter Aaci_0043 PF13732 Aaci_0043 Aaci_0044 PF00072 Response regulator receiver domain Aaci_0044 PF00486 Transcriptional regulatory protein, C terminal Aaci_0045 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0047 PF01810 Aaci_0047 Aaci_0049 PF00356 Bacterial regulatory proteins, lacI family Aaci_0049 PF13377 Periplasmic binding protein-like domain Aaci_0050 PF04309 Glycerol-3-phosphate responsive antiterminator Aaci_0051 PF07690 Major Facilitator Superfamily Aaci_0052 PF13411 MerR HTH family regulatory protein Aaci_0053 PF01384 Aaci_0053 Aaci_0054 PF01865 Protein of unknown function DUF47 Aaci_0055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Aaci_0055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Aaci_0056 PF01266 FAD dependent oxidoreductase Aaci_0056 PF16901 Aaci_0056 Aaci_0057 PF09286 Pro-kumamolisin, activation domain Aaci_0058 PF00392 Bacterial regulatory proteins, gntR family Aaci_0058 PF07729 FCD domain Aaci_0059 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_0060 PF07477 Glycosyl hydrolase family 67 C-terminus Aaci_0060 PF07488 Glycosyl hydrolase family 67 middle domain Aaci_0061 PF10067 Aaci_0061 Aaci_0062 PF00474 Sodium:solute symporter family Aaci_0063 PF11755 Aaci_0063 Aaci_0064 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0064 PF00989 PAS fold Aaci_0064 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0065 PF00535 Glycosyl transferase family 2 Aaci_0066 PF00625 Guanylate kinase Aaci_0066 PF13443 Cro/C1-type HTH DNA-binding domain Aaci_0067 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0067 PF00672 HAMP domain Aaci_0067 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0068 PF01841 Transglutaminase-like superfamily Aaci_0068 PF02674 Aaci_0068 Aaci_0069 PF00106 short chain dehydrogenase Aaci_0070 PF00265 Thymidine kinase Aaci_0071 PF14359 Domain of unknown function (DUF4406) Aaci_0072 PF01946 Thi4 family Aaci_0073 PF13091 PLD-like domain Aaci_0074 PF03009 Glycerophosphoryl diester phosphodiesterase family Aaci_0075 PF13416 Bacterial extracellular solute-binding protein Aaci_0076 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0077 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0078 PF02073 Thermophilic metalloprotease (M29) Aaci_0079 PF01019 Gamma-glutamyltranspeptidase Aaci_0080 PF01470 Pyroglutamyl peptidase Aaci_0081 PF00440 Bacterial regulatory proteins, tetR family Aaci_0083 PF13245 Part of AAA domain Aaci_0083 PF13538 UvrD-like helicase C-terminal domain Aaci_0084 PF00300 Histidine phosphatase superfamily (branch 1) Aaci_0085 PF00342 Phosphoglucose isomerase Aaci_0086 PF00480 ROK family Aaci_0087 PF03698 Aaci_0087 Aaci_0091 PF03176 MMPL family Aaci_0092 PF00440 Bacterial regulatory proteins, tetR family Aaci_0094 PF03079 ARD/ARD' family Aaci_0095 PF14172 Aaci_0095 Aaci_0096 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Aaci_0097 PF12710 haloacid dehalogenase-like hydrolase Aaci_0098 PF00596 Class II Aldolase and Adducin N-terminal domain Aaci_0101 PF00733 Asparagine synthase Aaci_0101 PF13537 Glutamine amidotransferase domain Aaci_0102 PF10719 Aaci_0102 Aaci_0103 PF14437 Aaci_0103 Aaci_0104 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0104 PF00989 PAS fold Aaci_0104 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0106 PF12169 DNA polymerase III subunits gamma and tau domain III Aaci_0106 PF13177 DNA polymerase III, delta subunit Aaci_0107 PF02575 YbaB/EbfC DNA-binding family Aaci_0108 PF02132 RecR protein Aaci_0108 PF13662 Toprim domain Aaci_0109 PF01741 Large-conductance mechanosensitive channel, MscL Aaci_0110 PF00392 Bacterial regulatory proteins, gntR family Aaci_0110 PF07729 FCD domain Aaci_0111 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_0112 PF00872 Aaci_0112 Aaci_0113 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0114 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0115 PF10704 Aaci_0115 Aaci_0116 PF07441 Aaci_0116 Aaci_0117 PF01943 Aaci_0117 Aaci_0117 PF14667 Polysaccharide biosynthesis C-terminal domain Aaci_0118 PF10764 Aaci_0118 Aaci_0120 PF01276 Orn/Lys/Arg decarboxylase, major domain Aaci_0120 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Aaci_0121 PF02223 Thymidylate kinase Aaci_0122 PF06153 Protein of unknown function (DUF970) Aaci_0123 PF13177 DNA polymerase III, delta subunit Aaci_0124 PF04468 Aaci_0124 Aaci_0125 PF06156 Aaci_0125 Aaci_0126 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Aaci_0127 PF04014 Antidote-toxin recognition MazE Aaci_0128 PF00133 tRNA synthetases class I (I, L, M and V) Aaci_0128 PF01588 Putative tRNA binding domain Aaci_0128 PF08264 Anticodon-binding domain of tRNA Aaci_0128 PF09334 tRNA synthetases class I (M) Aaci_0129 PF01026 TatD related DNase Aaci_0130 PF13331 Aaci_0130 Aaci_0131 PF00398 Ribosomal RNA adenine dimethylase Aaci_0133 PF00268 Ribonucleotide reductase, small chain Aaci_0134 PF00561 alpha/beta hydrolase fold Aaci_0139 PF00196 Bacterial regulatory proteins, luxR family Aaci_0139 PF01590 GAF domain Aaci_0140 PF00390 Malic enzyme, N-terminal domain Aaci_0140 PF03949 Malic enzyme, NAD binding domain Aaci_0141 PF02036 SCP-2 sterol transfer family Aaci_0142 PF00501 AMP-binding enzyme Aaci_0142 PF13193 AMP-binding enzyme C-terminal domain Aaci_0143 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_0143 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_0144 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_0144 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_0144 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_0145 PF00378 Enoyl-CoA hydratase/isomerase family Aaci_0146 PF00106 short chain dehydrogenase Aaci_0146 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_0147 PF00108 Thiolase, N-terminal domain Aaci_0147 PF02803 Thiolase, C-terminal domain Aaci_0149 PF04203 Sortase family Aaci_0150 PF01636 Phosphotransferase enzyme family Aaci_0150 PF03109 Aaci_0150 Aaci_0152 PF00171 Aldehyde dehydrogenase family Aaci_0153 PF00465 Iron-containing alcohol dehydrogenase Aaci_0154 PF00395 S-layer homology domain Aaci_0155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_0155 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_0155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_0156 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_0157 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_0158 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_0158 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_0158 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_0159 PF00501 AMP-binding enzyme Aaci_0159 PF13193 AMP-binding enzyme C-terminal domain Aaci_0160 PF13452 N-terminal half of MaoC dehydratase Aaci_0161 PF01575 MaoC like domain Aaci_0162 PF01614 Bacterial transcriptional regulator Aaci_0162 PF09339 IclR helix-turn-helix domain Aaci_0164 PF01636 Phosphotransferase enzyme family Aaci_0165 PF00149 Calcineurin-like phosphoesterase Aaci_0166 PF04308 Aaci_0166 Aaci_0168 PF05582 Aaci_0168 Aaci_0169 PF00665 Integrase core domain Aaci_0169 PF13551 Winged helix-turn helix Aaci_0170 PF06257 Protein of unknown function (DUF1021) Aaci_0171 PF00269 Small, acid-soluble spore proteins, alpha/beta type Aaci_0172 PF03575 Peptidase family S51 Aaci_0173 PF02875 Mur ligase family, glutamate ligase domain Aaci_0173 PF08245 Mur ligase middle domain Aaci_0173 PF08443 RimK-like ATP-grasp domain Aaci_0174 PF00288 GHMP kinases N terminal domain Aaci_0174 PF08544 GHMP kinases C terminal Aaci_0175 PF00156 Phosphoribosyl transferase domain Aaci_0175 PF09182 Bacterial purine repressor, N-terminal Aaci_0176 PF01042 Endoribonuclease L-PSP Aaci_0177 PF04026 SpoVG Aaci_0178 PF00132 Bacterial transferase hexapeptide (six repeats) Aaci_0178 PF12804 MobA-like NTP transferase domain Aaci_0179 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Aaci_0179 PF14572 Phosphoribosyl synthetase-associated domain Aaci_0180 PF01195 Peptidyl-tRNA hydrolase Aaci_0181 PF10955 Aaci_0181 Aaci_0182 PF00270 DEAD/DEAH box helicase Aaci_0182 PF00271 Helicase conserved C-terminal domain Aaci_0182 PF02559 CarD-like/TRCF domain Aaci_0182 PF03461 TRCF domain Aaci_0183 PF04014 Antidote-toxin recognition MazE Aaci_0183 PF15714 Aaci_0183 Aaci_0185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Aaci_0185 PF03819 MazG nucleotide pyrophosphohydrolase domain Aaci_0186 PF00216 Bacterial DNA-binding protein Aaci_0187 PF01479 S4 domain Aaci_0188 PF07873 YabP family Aaci_0189 PF09578 Aaci_0189 Aaci_0190 PF04977 Septum formation initiator Aaci_0191 PF00575 S1 RNA binding domain Aaci_0194 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Aaci_0195 PF07228 Stage II sporulation protein E (SpoIIE) Aaci_0196 PF00092 von Willebrand factor type A domain Aaci_0197 PF00069 Protein kinase domain Aaci_0198 PF01171 PP-loop family Aaci_0198 PF09179 TilS substrate binding domain Aaci_0198 PF11734 TilS substrate C-terminal domain Aaci_0199 PF00156 Phosphoribosyl transferase domain Aaci_0200 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_0200 PF01434 Peptidase family M41 Aaci_0200 PF06480 FtsH Extracellular Aaci_0203 PF01966 HD domain Aaci_0204 PF01430 Hsp33 protein Aaci_0205 PF00809 Pterin binding enzyme Aaci_0206 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Aaci_0207 PF13560 Helix-turn-helix domain Aaci_0208 PF01272 Transcription elongation factor, GreA/GreB, C-term Aaci_0208 PF03449 Transcription elongation factor, N-terminal Aaci_0209 PF00152 tRNA synthetases class II (D, K and N) Aaci_0209 PF01336 OB-fold nucleic acid binding domain Aaci_0211 PF05163 DinB family Aaci_0212 PF02673 Aaci_0212 Aaci_0213 PF07690 Major Facilitator Superfamily Aaci_0214 PF00892 EamA-like transporter family Aaci_0215 PF04892 Aaci_0215 Aaci_0216 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_0217 PF00155 Aminotransferase class I and II Aaci_0218 PF00551 Formyl transferase Aaci_0219 PF00107 Zinc-binding dehydrogenase Aaci_0219 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_0220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Aaci_0220 PF02378 Phosphotransferase system, EIIC Aaci_0221 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Aaci_0221 PF00874 PRD domain Aaci_0221 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Aaci_0222 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Aaci_0223 PF01232 Mannitol dehydrogenase Rossmann domain Aaci_0223 PF08125 Mannitol dehydrogenase C-terminal domain Aaci_0224 PF00381 PTS HPr component phosphorylation site Aaci_0225 PF00391 PEP-utilising enzyme, mobile domain Aaci_0225 PF02896 PEP-utilising enzyme, TIM barrel domain Aaci_0225 PF05524 PEP-utilising enzyme, N-terminal Aaci_0226 PF04542 Sigma-70 region 2 Aaci_0226 PF08281 Sigma-70, region 4 Aaci_0227 PF10099 Aaci_0227 Aaci_0227 PF13490 Putative zinc-finger Aaci_0228 PF01425 Amidase Aaci_0230 PF08389 Exportin 1-like protein Aaci_0231 PF00005 ABC transporter Aaci_0232 PF00005 ABC transporter Aaci_0233 PF02632 BioY family Aaci_0234 PF00563 EAL domain Aaci_0234 PF00990 GGDEF domain Aaci_0235 PF07690 Major Facilitator Superfamily Aaci_0237 PF00581 Rhodanese-like domain Aaci_0239 PF07519 Tannase and feruloyl esterase Aaci_0240 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_0241 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Aaci_0241 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Aaci_0242 PF02537 Aaci_0242 Aaci_0243 PF02537 Aaci_0243 Aaci_0245 PF04138 Aaci_0245 Aaci_0246 PF01717 Cobalamin-independent synthase, Catalytic domain Aaci_0247 PF00082 Subtilase family Aaci_0247 PF09286 Pro-kumamolisin, activation domain Aaci_0249 PF00072 Response regulator receiver domain Aaci_0249 PF00486 Transcriptional regulatory protein, C terminal Aaci_0250 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0250 PF13492 GAF domain Aaci_0250 PF13493 Domain of unknown function (DUF4118) Aaci_0251 PF03814 Aaci_0251 Aaci_0252 PF00122 E1-E2 ATPase Aaci_0252 PF00702 haloacid dehalogenase-like hydrolase Aaci_0253 PF02669 Aaci_0253 Aaci_0254 PF00582 Universal stress protein family Aaci_0254 PF02702 Osmosensitive K+ channel His kinase sensor domain Aaci_0255 PF01522 Polysaccharide deacetylase Aaci_0256 PF00248 Aldo/keto reductase family Aaci_0257 PF07690 Major Facilitator Superfamily Aaci_0258 PF00704 Glycosyl hydrolases family 18 Aaci_0258 PF01476 LysM domain Aaci_0259 PF13407 Periplasmic binding protein domain Aaci_0260 PF00005 ABC transporter Aaci_0261 PF02653 Aaci_0261 Aaci_0264 PF00682 HMGL-like Aaci_0264 PF08502 LeuA allosteric (dimerisation) domain Aaci_0265 PF00255 Glutathione peroxidase Aaci_0268 PF01205 Uncharacterized protein family UPF0029 Aaci_0268 PF09186 Domain of unknown function (DUF1949) Aaci_0271 PF04932 Aaci_0271 Aaci_0272 PF02397 Aaci_0272 Aaci_0272 PF13727 CoA-binding domain Aaci_0273 PF00534 Glycosyl transferases group 1 Aaci_0273 PF13439 Glycosyltransferase Family 4 Aaci_0274 PF00534 Glycosyl transferases group 1 Aaci_0274 PF13439 Glycosyltransferase Family 4 Aaci_0275 PF01061 Aaci_0275 Aaci_0276 PF00005 ABC transporter Aaci_0277 PF00534 Glycosyl transferases group 1 Aaci_0279 PF01609 Transposase DDE domain Aaci_0282 PF00149 Calcineurin-like phosphoesterase Aaci_0282 PF12320 Type 5 capsule protein repressor C-terminal domain Aaci_0283 PF13476 AAA domain Aaci_0283 PF13558 Putative exonuclease SbcCD, C subunit Aaci_0285 PF00122 E1-E2 ATPase Aaci_0285 PF00403 Heavy-metal-associated domain Aaci_0285 PF00702 haloacid dehalogenase-like hydrolase Aaci_0286 PF00501 AMP-binding enzyme Aaci_0286 PF13193 AMP-binding enzyme C-terminal domain Aaci_0287 PF10099 Aaci_0287 Aaci_0287 PF13490 Putative zinc-finger Aaci_0288 PF04542 Sigma-70 region 2 Aaci_0288 PF08281 Sigma-70, region 4 Aaci_0290 PF00174 Oxidoreductase molybdopterin binding domain Aaci_0291 PF00902 Sec-independent protein translocase protein (TatC) Aaci_0292 PF02416 mttA/Hcf106 family Aaci_0293 PF01225 Mur ligase family, catalytic domain Aaci_0293 PF02875 Mur ligase family, glutamate ligase domain Aaci_0293 PF08245 Mur ligase middle domain Aaci_0294 PF00905 Penicillin binding protein transpeptidase domain Aaci_0294 PF03717 Penicillin-binding Protein dimerisation domain Aaci_0296 PF08950 Protein of unknown function (DUF1861) Aaci_0297 PF13432 Tetratricopeptide repeat Aaci_0297 PF14559 Tetratricopeptide repeat Aaci_0298 PF02261 Aspartate decarboxylase Aaci_0299 PF00742 Homoserine dehydrogenase Aaci_0299 PF03447 Homoserine dehydrogenase, NAD binding domain Aaci_0300 PF13975 Aaci_0300 Aaci_0301 PF00437 Type II/IV secretion system protein Aaci_0301 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Aaci_0302 PF00482 Type II secretion system (T2SS), protein F Aaci_0303 PF07963 Prokaryotic N-terminal methylation motif Aaci_0304 PF07963 Prokaryotic N-terminal methylation motif Aaci_0305 PF07963 Prokaryotic N-terminal methylation motif Aaci_0307 PF11104 Type IV pilus assembly protein PilM; Aaci_0308 PF05137 Aaci_0308 Aaci_0309 PF04612 Type II secretion system (T2SS), protein M Aaci_0310 PF00437 Type II/IV secretion system protein Aaci_0311 PF01478 Type IV leader peptidase family Aaci_0311 PF06750 Aaci_0311 Aaci_0312 PF00270 DEAD/DEAH box helicase Aaci_0312 PF00271 Helicase conserved C-terminal domain Aaci_0313 PF13231 Aaci_0313 Aaci_0314 PF00158 Sigma-54 interaction domain Aaci_0314 PF00989 PAS fold Aaci_0315 PF00202 Aminotransferase class-III Aaci_0316 PF00171 Aldehyde dehydrogenase family Aaci_0318 PF01841 Transglutaminase-like superfamily Aaci_0319 PF04041 Domain of unknown function (DUF377) Aaci_0321 PF00491 Arginase family Aaci_0322 PF00202 Aminotransferase class-III Aaci_0323 PF00171 Aldehyde dehydrogenase family Aaci_0324 PF00158 Sigma-54 interaction domain Aaci_0324 PF02954 Bacterial regulatory protein, Fis family Aaci_0324 PF08448 PAS fold Aaci_0325 PF00324 Amino acid permease Aaci_0326 PF00309 Aaci_0326 Aaci_0326 PF04552 Sigma-54, DNA binding domain Aaci_0326 PF04963 Sigma-54 factor, core binding domain Aaci_0328 PF16147 Aaci_0328 Aaci_0330 PF01471 Putative peptidoglycan binding domain Aaci_0330 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Aaci_0331 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_0332 PF00933 Glycosyl hydrolase family 3 N terminal domain Aaci_0332 PF01915 Glycosyl hydrolase family 3 C-terminal domain Aaci_0332 PF14310 Fibronectin type III-like domain Aaci_0334 PF01613 Flavin reductase like domain Aaci_0335 PF00083 Sugar (and other) transporter Aaci_0336 PF00392 Bacterial regulatory proteins, gntR family Aaci_0336 PF07729 FCD domain Aaci_0337 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aaci_0338 PF00171 Aldehyde dehydrogenase family Aaci_0339 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal Aaci_0339 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal Aaci_0340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aaci_0341 PF00701 Dihydrodipicolinate synthetase family Aaci_0342 PF00199 Catalase Aaci_0343 PF03176 MMPL family Aaci_0344 PF07301 Aaci_0344 Aaci_0345 PF00768 D-alanyl-D-alanine carboxypeptidase Aaci_0346 PF00905 Penicillin binding protein transpeptidase domain Aaci_0346 PF00912 Transglycosylase Aaci_0347 PF00483 Nucleotidyl transferase Aaci_0347 PF01050 Mannose-6-phosphate isomerase Aaci_0348 PF00085 Thioredoxin Aaci_0350 PF13662 Toprim domain Aaci_0351 PF00557 Metallopeptidase family M24 Aaci_0353 PF04020 Aaci_0353 Aaci_0354 PF01648 4'-phosphopantetheinyl transferase superfamily Aaci_0355 PF01256 Carbohydrate kinase Aaci_0355 PF03853 YjeF-related protein N-terminus Aaci_0357 PF00842 Alanine racemase, C-terminal domain Aaci_0357 PF01168 Alanine racemase, N-terminal domain Aaci_0359 PF02452 PemK-like protein Aaci_0360 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Aaci_0360 PF05221 S-adenosyl-L-homocysteine hydrolase Aaci_0361 PF07722 Peptidase C26 Aaci_0362 PF00672 HAMP domain Aaci_0362 PF01966 HD domain Aaci_0363 PF07872 Aaci_0363 Aaci_0364 PF11148 Aaci_0364 Aaci_0365 PF07293 Aaci_0365 Aaci_0366 PF09335 Aaci_0366 Aaci_0368 PF00586 AIR synthase related protein, N-terminal domain Aaci_0368 PF02769 AIR synthase related protein, C-terminal domain Aaci_0369 PF02367 Uncharacterised P-loop hydrolase UPF0079 Aaci_0370 PF00814 Glycoprotease family Aaci_0371 PF00583 Acetyltransferase (GNAT) family Aaci_0372 PF00814 Glycoprotease family Aaci_0373 PF00005 ABC transporter Aaci_0373 PF12848 ABC transporter Aaci_0374 PF01569 PAP2 superfamily Aaci_0375 PF01812 5-formyltetrahydrofolate cyclo-ligase family Aaci_0376 PF12804 MobA-like NTP transferase domain Aaci_0377 PF00994 Probable molybdopterin binding domain Aaci_0378 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Aaci_0379 PF00166 Chaperonin 10 Kd subunit Aaci_0380 PF00118 TCP-1/cpn60 chaperonin family Aaci_0381 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_0382 PF07849 Aaci_0382 Aaci_0383 PF00581 Rhodanese-like domain Aaci_0383 PF00753 Metallo-beta-lactamase superfamily Aaci_0384 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0384 PF07730 Histidine kinase Aaci_0384 PF13188 PAS domain Aaci_0385 PF00072 Response regulator receiver domain Aaci_0385 PF00196 Bacterial regulatory proteins, luxR family Aaci_0387 PF07726 ATPase family associated with various cellular activities (AAA) Aaci_0388 PF01882 Aaci_0388 Aaci_0389 PF01841 Transglutaminase-like superfamily Aaci_0390 PF00753 Metallo-beta-lactamase superfamily Aaci_0392 PF00117 Glutamine amidotransferase class-I Aaci_0392 PF00958 GMP synthase C terminal domain Aaci_0392 PF03054 tRNA methyl transferase Aaci_0393 PF00206 Lyase Aaci_0393 PF10397 Adenylosuccinate lyase C-terminus Aaci_0394 PF01259 SAICAR synthetase Aaci_0395 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Aaci_0396 PF13507 CobB/CobQ-like glutamine amidotransferase domain Aaci_0397 PF00586 AIR synthase related protein, N-terminal domain Aaci_0397 PF02769 AIR synthase related protein, C-terminal domain Aaci_0398 PF00156 Phosphoribosyl transferase domain Aaci_0398 PF13537 Glutamine amidotransferase domain Aaci_0399 PF00586 AIR synthase related protein, N-terminal domain Aaci_0399 PF02769 AIR synthase related protein, C-terminal domain Aaci_0400 PF01808 AICARFT/IMPCHase bienzyme Aaci_0400 PF02142 MGS-like domain Aaci_0401 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Aaci_0401 PF02843 Phosphoribosylglycinamide synthetase, C domain Aaci_0401 PF02844 Phosphoribosylglycinamide synthetase, N domain Aaci_0402 PF00892 EamA-like transporter family Aaci_0403 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_0404 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Aaci_0404 PF13378 Enolase C-terminal domain-like Aaci_0405 PF00005 ABC transporter Aaci_0406 PF02687 Aaci_0406 Aaci_0408 PF01618 Aaci_0408 Aaci_0409 PF00691 OmpA family Aaci_0409 PF13677 Aaci_0409 Aaci_0410 PF00271 Helicase conserved C-terminal domain Aaci_0410 PF02151 UvrB/uvrC motif Aaci_0410 PF04851 Type III restriction enzyme, res subunit Aaci_0410 PF12344 Ultra-violet resistance protein B Aaci_0412 PF02603 HPr Serine kinase N terminus Aaci_0412 PF07475 HPr Serine kinase C-terminal domain Aaci_0413 PF00750 tRNA synthetases class I (R) Aaci_0413 PF03485 Arginyl tRNA synthetase N terminal domain Aaci_0413 PF05746 DALR anticodon binding domain Aaci_0414 PF13432 Tetratricopeptide repeat Aaci_0414 PF14559 Tetratricopeptide repeat Aaci_0415 PF00293 NUDIX domain Aaci_0416 PF03668 Aaci_0416 Aaci_0417 PF01933 Uncharacterised protein family UPF0052 Aaci_0418 PF02650 WhiA C-terminal HTH domain Aaci_0418 PF10298 WhiA N-terminal LAGLIDADG-like domain Aaci_0418 PF14527 WhiA LAGLIDADG-like domain Aaci_0419 PF00381 PTS HPr component phosphorylation site Aaci_0423 PF00633 Helix-hairpin-helix motif Aaci_0423 PF00730 HhH-GPD superfamily base excision DNA repair protein Aaci_0423 PF14815 NUDIX domain Aaci_0424 PF01027 Inhibitor of apoptosis-promoting Bax1 Aaci_0425 PF00133 tRNA synthetases class I (I, L, M and V) Aaci_0425 PF08264 Anticodon-binding domain of tRNA Aaci_0425 PF09334 tRNA synthetases class I (M) Aaci_0425 PF13603 Leucyl-tRNA synthetase, Domain 2 Aaci_0426 PF00392 Bacterial regulatory proteins, gntR family Aaci_0426 PF07729 FCD domain Aaci_0429 PF01594 Aaci_0429 Aaci_0430 PF04167 Protein of unknown function (DUF402) Aaci_0431 PF13921 Myb-like DNA-binding domain Aaci_0432 PF00270 DEAD/DEAH box helicase Aaci_0432 PF00271 Helicase conserved C-terminal domain Aaci_0432 PF09369 Aaci_0432 Aaci_0433 PF13482 RNase_H superfamily Aaci_0434 PF06335 Protein of unknown function (DUF1054) Aaci_0435 PF00149 Calcineurin-like phosphoesterase Aaci_0435 PF02872 5'-nucleotidase, C-terminal domain Aaci_0436 PF00633 Helix-hairpin-helix motif Aaci_0436 PF00730 HhH-GPD superfamily base excision DNA repair protein Aaci_0436 PF10576 Iron-sulfur binding domain of endonuclease III Aaci_0437 PF09911 Aaci_0437 Aaci_0438 PF03323 Aaci_0438 Aaci_0439 PF03845 Aaci_0439 Aaci_0441 PF00465 Iron-containing alcohol dehydrogenase Aaci_0442 PF00171 Aldehyde dehydrogenase family Aaci_0443 PF00083 Sugar (and other) transporter Aaci_0444 PF00158 Sigma-54 interaction domain Aaci_0444 PF00989 PAS fold Aaci_0444 PF02954 Bacterial regulatory protein, Fis family Aaci_0445 PF00501 AMP-binding enzyme Aaci_0445 PF13193 AMP-binding enzyme C-terminal domain Aaci_0446 PF00075 RNase H Aaci_0447 PF08331 Aaci_0447 Aaci_0447 PF13484 Aaci_0447 Aaci_0447 PF13646 HEAT repeats Aaci_0448 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Aaci_0449 PF01636 Phosphotransferase enzyme family Aaci_0450 PF00180 Isocitrate/isopropylmalate dehydrogenase Aaci_0451 PF01614 Bacterial transcriptional regulator Aaci_0451 PF09339 IclR helix-turn-helix domain Aaci_0452 PF12671 Aaci_0452 Aaci_0453 PF00588 SpoU rRNA Methylase family Aaci_0454 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Aaci_0454 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_0455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Aaci_0455 PF00364 Biotin-requiring enzyme Aaci_0455 PF02817 e3 binding domain Aaci_0456 PF02779 Transketolase, pyrimidine binding domain Aaci_0456 PF02780 Transketolase, C-terminal domain Aaci_0457 PF00676 Dehydrogenase E1 component Aaci_0458 PF00756 Putative esterase Aaci_0459 PF00135 Carboxylesterase family Aaci_0460 PF06798 Aaci_0460 Aaci_0460 PF08298 PrkA AAA domain Aaci_0461 PF04285 Aaci_0461 Aaci_0463 PF00239 Resolvase, N terminal domain Aaci_0463 PF07508 Recombinase Aaci_0463 PF13408 Recombinase zinc beta ribbon domain Aaci_0464 PF06114 Domain of unknown function (DUF955) Aaci_0465 PF01381 Helix-turn-helix Aaci_0466 PF01381 Helix-turn-helix Aaci_0467 PF13560 Helix-turn-helix domain Aaci_0468 PF01381 Helix-turn-helix Aaci_0469 PF01381 Helix-turn-helix Aaci_0471 PF01381 Helix-turn-helix Aaci_0472 PF01381 Helix-turn-helix Aaci_0476 PF12705 PD-(D/E)XK nuclease superfamily Aaci_0480 PF00271 Helicase conserved C-terminal domain Aaci_0480 PF04851 Type III restriction enzyme, res subunit Aaci_0482 PF14359 Domain of unknown function (DUF4406) Aaci_0484 PF00712 DNA polymerase III beta subunit, N-terminal domain Aaci_0484 PF02767 DNA polymerase III beta subunit, central domain Aaci_0484 PF02768 DNA polymerase III beta subunit, C-terminal domain Aaci_0491 PF05037 Aaci_0491 Aaci_0495 PF05866 Endodeoxyribonuclease RusA Aaci_0496 PF13238 AAA domain Aaci_0498 PF00929 Exonuclease Aaci_0498 PF12843 Aaci_0498 Aaci_0499 PF00665 Integrase core domain Aaci_0499 PF13551 Winged helix-turn helix Aaci_0501 PF08281 Sigma-70, region 4 Aaci_0503 PF01609 Transposase DDE domain Aaci_0503 PF05598 Aaci_0503 Aaci_0506 PF01695 IstB-like ATP binding protein Aaci_0508 PF00872 Aaci_0508 Aaci_0511 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Aaci_0512 PF00115 Cytochrome C and Quinol oxidase polypeptide I Aaci_0513 PF00510 Cytochrome c oxidase subunit III Aaci_0514 PF03626 Aaci_0514 Aaci_0515 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0515 PF08447 PAS fold Aaci_0515 PF08448 PAS fold Aaci_0516 PF00072 Response regulator receiver domain Aaci_0516 PF00196 Bacterial regulatory proteins, luxR family Aaci_0517 PF01609 Transposase DDE domain Aaci_0520 PF00056 lactate/malate dehydrogenase, NAD binding domain Aaci_0520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Aaci_0521 PF01609 Transposase DDE domain Aaci_0521 PF14104 Aaci_0521 Aaci_0522 PF01593 Flavin containing amine oxidoreductase Aaci_0523 PF01609 Transposase DDE domain Aaci_0523 PF05598 Aaci_0523 Aaci_0524 PF07194 P2 response regulator binding domain Aaci_0526 PF00989 PAS fold Aaci_0526 PF00990 GGDEF domain Aaci_0526 PF13487 HD domain Aaci_0527 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aaci_0528 PF00582 Universal stress protein family Aaci_0532 PF01936 NYN domain Aaci_0534 PF01022 Bacterial regulatory protein, arsR family Aaci_0535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aaci_0536 PF02040 Aaci_0536 Aaci_0537 PF01451 Low molecular weight phosphotyrosine protein phosphatase Aaci_0538 PF13420 Acetyltransferase (GNAT) domain Aaci_0539 PF02086 D12 class N6 adenine-specific DNA methyltransferase Aaci_0541 PF01385 Aaci_0541 Aaci_0541 PF07282 Aaci_0541 Aaci_0541 PF12323 Aaci_0541 Aaci_0544 PF04542 Sigma-70 region 2 Aaci_0544 PF08281 Sigma-70, region 4 Aaci_0547 PF06094 AIG2-like family Aaci_0549 PF08281 Sigma-70, region 4 Aaci_0560 PF04014 Antidote-toxin recognition MazE Aaci_0561 PF01850 PIN domain Aaci_0563 PF02195 ParB-like nuclease domain Aaci_0568 PF02498 Aaci_0568 Aaci_0571 PF04307 Aaci_0571 Aaci_0575 PF12846 AAA-like domain Aaci_0578 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Aaci_0579 PF13144 SAF-like Aaci_0580 PF00437 Type II/IV secretion system protein Aaci_0590 PF00563 EAL domain Aaci_0592 PF02600 Disulfide bond formation protein DsbB Aaci_0595 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Aaci_0596 PF13144 SAF-like Aaci_0597 PF00437 Type II/IV secretion system protein Aaci_0599 PF00482 Type II secretion system (T2SS), protein F Aaci_0601 PF04014 Antidote-toxin recognition MazE Aaci_0602 PF01850 PIN domain Aaci_0604 PF01478 Type IV leader peptidase family Aaci_0605 PF13400 Aaci_0605 Aaci_0611 PF01464 Transglycosylase SLT domain Aaci_0612 PF01935 Domain of unknown function DUF87 Aaci_0614 PF12224 Aaci_0614 Aaci_0615 PF06094 AIG2-like family Aaci_0618 PF04014 Antidote-toxin recognition MazE Aaci_0619 PF13520 Amino acid permease Aaci_0620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aaci_0620 PF03466 LysR substrate binding domain Aaci_0621 PF01850 PIN domain Aaci_0622 PF04014 Antidote-toxin recognition MazE Aaci_0625 PF04293 Aaci_0625 Aaci_0626 PF07690 Major Facilitator Superfamily Aaci_0627 PF01965 DJ-1/PfpI family Aaci_0629 PF09660 Aaci_0629 Aaci_0630 PF09661 Aaci_0630 Aaci_0631 PF13558 Putative exonuclease SbcCD, C subunit Aaci_0632 PF09664 Aaci_0632 Aaci_0632 PF11796 Aaci_0632 Aaci_0633 PF03458 Aaci_0633 Aaci_0634 PF03013 Pyrimidine dimer DNA glycosylase Aaci_0635 PF00563 EAL domain Aaci_0637 PF01583 Adenylylsulphate kinase Aaci_0638 PF13469 Sulfotransferase family Aaci_0639 PF00881 Nitroreductase family Aaci_0640 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Aaci_0641 PF00873 AcrB/AcrD/AcrF family Aaci_0642 PF12679 Aaci_0642 Aaci_0643 PF00005 ABC transporter Aaci_0645 PF00005 ABC transporter Aaci_0646 PF00392 Bacterial regulatory proteins, gntR family Aaci_0647 PF00753 Metallo-beta-lactamase superfamily Aaci_0647 PF12706 Beta-lactamase superfamily domain Aaci_0648 PF07690 Major Facilitator Superfamily Aaci_0649 PF01047 MarR family Aaci_0650 PF00999 Sodium/hydrogen exchanger family Aaci_0650 PF02080 TrkA-C domain Aaci_0652 PF00005 ABC transporter Aaci_0653 PF01061 Aaci_0653 Aaci_0654 PF07730 Histidine kinase Aaci_0655 PF00072 Response regulator receiver domain Aaci_0655 PF00196 Bacterial regulatory proteins, luxR family Aaci_0656 PF12850 Calcineurin-like phosphoesterase superfamily domain Aaci_0658 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Aaci_0659 PF00115 Cytochrome C and Quinol oxidase polypeptide I Aaci_0660 PF00510 Cytochrome c oxidase subunit III Aaci_0661 PF03626 Aaci_0661 Aaci_0662 PF02628 Aaci_0662 Aaci_0663 PF00768 D-alanyl-D-alanine carboxypeptidase Aaci_0664 PF01596 O-methyltransferase Aaci_0665 PF09992 Predicted periplasmic protein (DUF2233) Aaci_0667 PF00248 Aldo/keto reductase family Aaci_0668 PF00465 Iron-containing alcohol dehydrogenase Aaci_0669 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_0670 PF04238 Aaci_0670 Aaci_0671 PF03992 Antibiotic biosynthesis monooxygenase Aaci_0673 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0673 PF01339 CheB methylesterase Aaci_0673 PF01739 CheR methyltransferase, SAM binding domain Aaci_0673 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0673 PF03705 CheR methyltransferase, all-alpha domain Aaci_0673 PF13426 PAS domain Aaci_0673 PF13596 PAS domain Aaci_0675 PF02310 B12 binding domain Aaci_0675 PF02607 B12 binding domain Aaci_0678 PF00106 short chain dehydrogenase Aaci_0679 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Aaci_0680 PF13302 Acetyltransferase (GNAT) domain Aaci_0682 PF00580 UvrD/REP helicase N-terminal domain Aaci_0682 PF13361 UvrD-like helicase C-terminal domain Aaci_0683 PF00533 BRCA1 C Terminus (BRCT) domain Aaci_0683 PF01653 NAD-dependent DNA ligase adenylation domain Aaci_0683 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Aaci_0683 PF03120 NAD-dependent DNA ligase OB-fold domain Aaci_0683 PF12826 Helix-hairpin-helix motif Aaci_0683 PF14520 Helix-hairpin-helix domain Aaci_0687 PF02686 Glu-tRNAGln amidotransferase C subunit Aaci_0688 PF01425 Amidase Aaci_0689 PF02637 GatB domain Aaci_0689 PF02934 GatB/GatE catalytic domain Aaci_0690 PF01938 TRAM domain Aaci_0690 PF05958 tRNA (Uracil-5-)-methyltransferase Aaci_0691 PF12146 Putative lysophospholipase Aaci_0695 PF00486 Transcriptional regulatory protein, C terminal Aaci_0698 PF00005 ABC transporter Aaci_0700 PF03547 Aaci_0700 Aaci_0702 PF00999 Sodium/hydrogen exchanger family Aaci_0703 PF00210 Ferritin-like domain Aaci_0704 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Aaci_0704 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Aaci_0705 PF00596 Class II Aldolase and Adducin N-terminal domain Aaci_0705 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_0707 PF07100 Anabaena sensory rhodopsin transducer Aaci_0708 PF00005 ABC transporter Aaci_0709 PF02653 Aaci_0709 Aaci_0710 PF02653 Aaci_0710 Aaci_0711 PF13407 Periplasmic binding protein domain Aaci_0712 PF00455 Aaci_0712 Aaci_0712 PF08220 DeoR-like helix-turn-helix domain Aaci_0714 PF01609 Transposase DDE domain Aaci_0714 PF14104 Aaci_0714 Aaci_0716 PF02589 Uncharacterised ACR, YkgG family COG1556 Aaci_0716 PF11870 Aaci_0716 Aaci_0716 PF13183 4Fe-4S dicluster domain Aaci_0717 PF02754 Aaci_0717 Aaci_0718 PF07870 Aaci_0718 Aaci_0719 PF04239 Protein of unknown function (DUF421) Aaci_0719 PF07870 Aaci_0719 Aaci_0720 PF03862 Aaci_0720 Aaci_0721 PF07451 Stage V sporulation protein AD (SpoVAD) Aaci_0722 PF03862 Aaci_0722 Aaci_0723 PF01757 Aaci_0723 Aaci_0724 PF02615 Malate/L-lactate dehydrogenase Aaci_0725 PF13472 GDSL-like Lipase/Acylhydrolase family Aaci_0726 PF13472 GDSL-like Lipase/Acylhydrolase family Aaci_0727 PF01757 Aaci_0727 Aaci_0728 PF00501 AMP-binding enzyme Aaci_0728 PF13193 AMP-binding enzyme C-terminal domain Aaci_0729 PF13145 PPIC-type PPIASE domain Aaci_0729 PF13624 SurA N-terminal domain Aaci_0730 PF00083 Sugar (and other) transporter Aaci_0731 PF04070 Aaci_0731 Aaci_0732 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Aaci_0732 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Aaci_0733 PF05681 Aaci_0733 Aaci_0733 PF05683 Fumarase C-terminus Aaci_0734 PF06983 3-demethylubiquinone-9 3-methyltransferase Aaci_0735 PF01566 Aaci_0735 Aaci_0736 PF14667 Polysaccharide biosynthesis C-terminal domain Aaci_0737 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Aaci_0737 PF00591 Glycosyl transferase family, a/b domain Aaci_0737 PF02885 Glycosyl transferase family, helical bundle domain Aaci_0737 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Aaci_0738 PF01432 Peptidase family M3 Aaci_0738 PF08439 Oligopeptidase F Aaci_0739 PF00512 His Kinase A (phospho-acceptor) domain Aaci_0739 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_0740 PF03807 NADP oxidoreductase coenzyme F420-dependent Aaci_0740 PF14748 Pyrroline-5-carboxylate reductase dimerisation Aaci_0741 PF00162 Phosphoglycerate kinase Aaci_0742 PF00121 Triosephosphate isomerase Aaci_0743 PF01676 Metalloenzyme superfamily Aaci_0743 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Aaci_0744 PF00113 Enolase, C-terminal TIM barrel domain Aaci_0744 PF03952 Enolase, N-terminal domain Aaci_0745 PF03840 Preprotein translocase SecG subunit Aaci_0746 PF07690 Major Facilitator Superfamily Aaci_0747 PF00575 S1 RNA binding domain Aaci_0747 PF00773 RNB domain Aaci_0747 PF08206 Ribonuclease B OB domain Aaci_0748 PF01668 SmpB protein Aaci_0749 PF00171 Aldehyde dehydrogenase family Aaci_0750 PF10057 Aaci_0750 Aaci_0751 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Aaci_0752 PF10070 Aaci_0752 Aaci_0754 PF00534 Glycosyl transferases group 1 Aaci_0754 PF11997 Aaci_0754 Aaci_0757 PF06305 Aaci_0757 Aaci_0758 PF08241 Methyltransferase domain Aaci_0759 PF00082 Subtilase family Aaci_0759 PF09286 Pro-kumamolisin, activation domain Aaci_0760 PF01717 Cobalamin-independent synthase, Catalytic domain Aaci_0760 PF08267 Cobalamin-independent synthase, N-terminal domain Aaci_0761 PF00296 Luciferase-like monooxygenase Aaci_0762 PF01613 Flavin reductase like domain Aaci_0763 PF13520 Amino acid permease Aaci_0764 PF09347 Domain of unknown function (DUF1989) Aaci_0765 PF09347 Domain of unknown function (DUF1989) Aaci_0766 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Aaci_0766 PF00364 Biotin-requiring enzyme Aaci_0766 PF02626 Allophanate hydrolase subunit 2 Aaci_0766 PF02682 Allophanate hydrolase subunit 1 Aaci_0766 PF02785 Biotin carboxylase C-terminal domain Aaci_0766 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Aaci_0767 PF01425 Amidase Aaci_0768 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0769 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0770 PF01547 Bacterial extracellular solute-binding protein Aaci_0772 PF07690 Major Facilitator Superfamily Aaci_0774 PF03069 Acetamidase/Formamidase family Aaci_0776 PF09992 Predicted periplasmic protein (DUF2233) Aaci_0778 PF00717 Peptidase S24-like Aaci_0779 PF00248 Aldo/keto reductase family Aaci_0780 PF00009 Elongation factor Tu GTP binding domain Aaci_0780 PF03144 Elongation factor Tu domain 2 Aaci_0780 PF16658 Aaci_0780 Aaci_0781 PF00246 Zinc carboxypeptidase Aaci_0782 PF00534 Glycosyl transferases group 1 Aaci_0782 PF13439 Glycosyltransferase Family 4 Aaci_0785 PF01370 NAD dependent epimerase/dehydratase family Aaci_0786 PF02065 Melibiase Aaci_0786 PF16874 Aaci_0786 Aaci_0786 PF16875 Aaci_0786 Aaci_0787 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Aaci_0788 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Aaci_0790 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aaci_0791 PF06165 Glycosyltransferase family 36 Aaci_0791 PF10091 Putative glucoamylase Aaci_0791 PF17167 Aaci_0791 Aaci_0792 PF00083 Sugar (and other) transporter Aaci_0793 PF00356 Bacterial regulatory proteins, lacI family Aaci_0793 PF13377 Periplasmic binding protein-like domain Aaci_0794 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0795 PF13416 Bacterial extracellular solute-binding protein Aaci_0796 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0797 PF02056 Family 4 glycosyl hydrolase Aaci_0797 PF11975 Family 4 glycosyl hydrolase C-terminal domain Aaci_0798 PF00285 Citrate synthase Aaci_0799 PF03972 MmgE/PrpD family Aaci_0800 PF13714 Phosphoenolpyruvate phosphomutase Aaci_0801 PF00291 Pyridoxal-phosphate dependent enzyme Aaci_0804 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_0804 PF07724 AAA domain (Cdc48 subfamily) Aaci_0804 PF10431 C-terminal, D2-small domain, of ClpB protein Aaci_0806 PF00440 Bacterial regulatory proteins, tetR family Aaci_0807 PF05138 Phenylacetic acid catabolic protein Aaci_0808 PF06243 Phenylacetic acid degradation B Aaci_0809 PF05138 Phenylacetic acid catabolic protein Aaci_0810 PF01883 Domain of unknown function DUF59 Aaci_0811 PF00501 AMP-binding enzyme Aaci_0811 PF14535 AMP-binding enzyme C-terminal domain Aaci_0812 PF07110 EthD domain Aaci_0814 PF00171 Aldehyde dehydrogenase family Aaci_0815 PF00378 Enoyl-CoA hydratase/isomerase family Aaci_0816 PF00108 Thiolase, N-terminal domain Aaci_0816 PF02803 Thiolase, C-terminal domain Aaci_0817 PF02646 Aaci_0817 Aaci_0818 PF14168 Aaci_0818 Aaci_0819 PF04172 Aaci_0819 Aaci_0820 PF03788 Aaci_0820 Aaci_0821 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aaci_0821 PF03466 LysR substrate binding domain Aaci_0822 PF03061 Thioesterase superfamily Aaci_0823 PF04299 Putative FMN-binding domain Aaci_0824 PF00155 Aminotransferase class I and II Aaci_0825 PF00676 Dehydrogenase E1 component Aaci_0826 PF02779 Transketolase, pyrimidine binding domain Aaci_0826 PF02780 Transketolase, C-terminal domain Aaci_0827 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Aaci_0827 PF00364 Biotin-requiring enzyme Aaci_0827 PF02817 e3 binding domain Aaci_0828 PF00378 Enoyl-CoA hydratase/isomerase family Aaci_0829 PF00892 EamA-like transporter family Aaci_0830 PF05977 Transmembrane secretion effector Aaci_0831 PF00107 Zinc-binding dehydrogenase Aaci_0831 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_0833 PF00005 ABC transporter Aaci_0833 PF00664 ABC transporter transmembrane region Aaci_0834 PF00005 ABC transporter Aaci_0834 PF00664 ABC transporter transmembrane region Aaci_0835 PF00107 Zinc-binding dehydrogenase Aaci_0836 PF00326 Prolyl oligopeptidase family Aaci_0836 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Aaci_0837 PF00005 ABC transporter Aaci_0837 PF00664 ABC transporter transmembrane region Aaci_0838 PF00005 ABC transporter Aaci_0838 PF00664 ABC transporter transmembrane region Aaci_0840 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Aaci_0841 PF10057 Aaci_0841 Aaci_0842 PF01226 Formate/nitrite transporter Aaci_0843 PF00384 Molybdopterin oxidoreductase Aaci_0843 PF01568 Molydopterin dinucleotide binding domain Aaci_0843 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Aaci_0843 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Aaci_0843 PF12838 4Fe-4S dicluster domain Aaci_0843 PF13510 2Fe-2S iron-sulfur cluster binding domain Aaci_0844 PF07849 Aaci_0844 Aaci_0845 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_0847 PF00581 Rhodanese-like domain Aaci_0848 PF00248 Aldo/keto reductase family Aaci_0849 PF00682 HMGL-like Aaci_0849 PF08502 LeuA allosteric (dimerisation) domain Aaci_0850 PF07690 Major Facilitator Superfamily Aaci_0853 PF08282 haloacid dehalogenase-like hydrolase Aaci_0854 PF09992 Predicted periplasmic protein (DUF2233) Aaci_0856 PF01432 Peptidase family M3 Aaci_0856 PF08439 Oligopeptidase F Aaci_0857 PF03352 Methyladenine glycosylase Aaci_0858 PF00085 Thioredoxin Aaci_0859 PF01625 Peptide methionine sulfoxide reductase Aaci_0860 PF00005 ABC transporter Aaci_0861 PF04264 YceI-like domain Aaci_0862 PF01638 HxlR-like helix-turn-helix Aaci_0863 PF01979 Amidohydrolase family Aaci_0864 PF01747 ATP-sulfurylase Aaci_0864 PF14306 PUA-like domain Aaci_0865 PF01047 MarR family Aaci_0866 PF09844 Aaci_0866 Aaci_0867 PF00749 tRNA synthetases class I (E and Q), catalytic domain Aaci_0868 PF00171 Aldehyde dehydrogenase family Aaci_0869 PF00248 Aldo/keto reductase family Aaci_0870 PF02390 Putative methyltransferase Aaci_0871 PF00857 Isochorismatase family Aaci_0873 PF13472 GDSL-like Lipase/Acylhydrolase family Aaci_0874 PF07690 Major Facilitator Superfamily Aaci_0875 PF13245 Part of AAA domain Aaci_0875 PF13538 UvrD-like helicase C-terminal domain Aaci_0876 PF12833 Helix-turn-helix domain Aaci_0877 PF07690 Major Facilitator Superfamily Aaci_0878 PF13673 Acetyltransferase (GNAT) domain Aaci_0879 PF06172 Cupin superfamily (DUF985) Aaci_0880 PF08830 Protein of unknown function (DUF1806) Aaci_0881 PF02585 GlcNAc-PI de-N-acetylase Aaci_0882 PF01451 Low molecular weight phosphotyrosine protein phosphatase Aaci_0885 PF00085 Thioredoxin Aaci_0886 PF13380 CoA binding domain Aaci_0886 PF13607 Succinyl-CoA ligase like flavodoxin domain Aaci_0887 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_0889 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Aaci_0890 PF00455 Aaci_0890 Aaci_0890 PF08220 DeoR-like helix-turn-helix domain Aaci_0891 PF00294 pfkB family carbohydrate kinase Aaci_0892 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Aaci_0892 PF02378 Phosphotransferase system, EIIC Aaci_0894 PF01425 Amidase Aaci_0895 PF04241 Aaci_0895 Aaci_0896 PF00892 EamA-like transporter family Aaci_0897 PF00326 Prolyl oligopeptidase family Aaci_0898 PF08818 Domain of unknown function (DU1801) Aaci_0898 PF13376 Aaci_0898 Aaci_0899 PF04434 Aaci_0899 Aaci_0900 PF01053 Cys/Met metabolism PLP-dependent enzyme Aaci_0901 PF13489 Methyltransferase domain Aaci_0902 PF00676 Dehydrogenase E1 component Aaci_0903 PF02779 Transketolase, pyrimidine binding domain Aaci_0903 PF02780 Transketolase, C-terminal domain Aaci_0904 PF00501 AMP-binding enzyme Aaci_0904 PF13193 AMP-binding enzyme C-terminal domain Aaci_0905 PF01070 FMN-dependent dehydrogenase Aaci_0906 PF02545 Maf-like protein Aaci_0908 PF03486 HI0933-like protein Aaci_0909 PF00892 EamA-like transporter family Aaci_0910 PF00465 Iron-containing alcohol dehydrogenase Aaci_0911 PF00356 Bacterial regulatory proteins, lacI family Aaci_0911 PF13377 Periplasmic binding protein-like domain Aaci_0912 PF06202 Amylo-alpha-1,6-glucosidase Aaci_0912 PF14742 Aaci_0912 Aaci_0913 PF01547 Bacterial extracellular solute-binding protein Aaci_0914 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0915 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_0916 PF00330 Aconitase family (aconitate hydratase) Aaci_0916 PF00694 Aconitase C-terminal domain Aaci_0917 PF00953 Glycosyl transferase family 4 Aaci_0918 PF01040 UbiA prenyltransferase family Aaci_0919 PF00107 Zinc-binding dehydrogenase Aaci_0919 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_0920 PF00107 Zinc-binding dehydrogenase Aaci_0920 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_0921 PF04551 GcpE protein Aaci_0922 PF01476 LysM domain Aaci_0923 PF13393 Histidyl-tRNA synthetase Aaci_0924 PF01634 ATP phosphoribosyltransferase Aaci_0925 PF00815 Histidinol dehydrogenase Aaci_0926 PF00475 Imidazoleglycerol-phosphate dehydratase Aaci_0927 PF00117 Glutamine amidotransferase class-I Aaci_0928 PF00977 Histidine biosynthesis protein Aaci_0929 PF00977 Histidine biosynthesis protein Aaci_0930 PF01502 Phosphoribosyl-AMP cyclohydrolase Aaci_0930 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Aaci_0932 PF00892 EamA-like transporter family Aaci_0933 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_0933 PF13602 Zinc-binding dehydrogenase Aaci_0934 PF13520 Amino acid permease Aaci_0936 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Aaci_0936 PF01872 RibD C-terminal domain Aaci_0937 PF00677 Lumazine binding domain Aaci_0938 PF00925 GTP cyclohydrolase II Aaci_0938 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Aaci_0939 PF00885 6,7-dimethyl-8-ribityllumazine synthase Aaci_0940 PF00313 'Cold-shock' DNA-binding domain Aaci_0941 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Aaci_0942 PF13470 Aaci_0942 Aaci_0944 PF09819 Aaci_0944 Aaci_0945 PF00005 ABC transporter Aaci_0945 PF02361 Cobalt transport protein Aaci_0946 PF00456 Transketolase, thiamine diphosphate binding domain Aaci_0946 PF02779 Transketolase, pyrimidine binding domain Aaci_0946 PF02780 Transketolase, C-terminal domain Aaci_0947 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aaci_0947 PF03466 LysR substrate binding domain Aaci_0948 PF03054 tRNA methyl transferase Aaci_0951 PF00106 short chain dehydrogenase Aaci_0952 PF00581 Rhodanese-like domain Aaci_0953 PF08830 Protein of unknown function (DUF1806) Aaci_0954 PF02585 GlcNAc-PI de-N-acetylase Aaci_0955 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_0955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_0955 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Aaci_0957 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Aaci_0958 PF01965 DJ-1/PfpI family Aaci_0959 PF00580 UvrD/REP helicase N-terminal domain Aaci_0959 PF13361 UvrD-like helicase C-terminal domain Aaci_0961 PF00583 Acetyltransferase (GNAT) family Aaci_0962 PF01106 NifU-like domain Aaci_0963 PF00849 RNA pseudouridylate synthase Aaci_0964 PF03631 Aaci_0964 Aaci_0965 PF02152 Dihydroneopterin aldolase Aaci_0966 PF10776 Aaci_0966 Aaci_0968 PF01926 50S ribosome-binding GTPase Aaci_0969 PF00350 Dynamin family Aaci_0970 PF13180 PDZ domain Aaci_0970 PF13365 Trypsin-like peptidase domain Aaci_0972 PF09335 Aaci_0972 Aaci_0974 PF00239 Resolvase, N terminal domain Aaci_0974 PF07508 Recombinase Aaci_0975 PF13472 GDSL-like Lipase/Acylhydrolase family Aaci_0977 PF01227 GTP cyclohydrolase I Aaci_0979 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Aaci_0979 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Aaci_0980 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_0981 PF01180 Dihydroorotate dehydrogenase Aaci_0982 PF04542 Sigma-70 region 2 Aaci_0982 PF08281 Sigma-70, region 4 Aaci_0984 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Aaci_0984 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Aaci_0985 PF01883 Domain of unknown function DUF59 Aaci_0986 PF00005 ABC transporter Aaci_0987 PF01458 Uncharacterized protein family (UPF0051) Aaci_0988 PF00266 Aminotransferase class-V Aaci_0989 PF01592 NifU-like N terminal domain Aaci_0990 PF01458 Uncharacterized protein family (UPF0051) Aaci_0991 PF00355 Rieske [2Fe-2S] domain Aaci_0992 PF02082 Transcriptional regulator Aaci_0994 PF13025 Aaci_0994 Aaci_0995 PF00459 Inositol monophosphatase family Aaci_0996 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Aaci_0997 PF02401 LytB protein Aaci_1000 PF13520 Amino acid permease Aaci_1001 PF00557 Metallopeptidase family M24 Aaci_1001 PF01321 Creatinase/Prolidase N-terminal domain Aaci_1002 PF08838 Protein of unknown function (DUF1811) Aaci_1004 PF14034 Aaci_1004 Aaci_1005 PF00176 SNF2 family N-terminal domain Aaci_1005 PF00271 Helicase conserved C-terminal domain Aaci_1005 PF12419 Aaci_1005 Aaci_1006 PF04434 Aaci_1006 Aaci_1009 PF02811 PHP domain Aaci_1009 PF07733 Bacterial DNA polymerase III alpha subunit Aaci_1009 PF14579 Helix-hairpin-helix motif Aaci_1010 PF13091 PLD-like domain Aaci_1011 PF01569 PAP2 superfamily Aaci_1012 PF13473 Cupredoxin-like domain Aaci_1013 PF02566 OsmC-like protein Aaci_1014 PF01230 HIT domain Aaci_1015 PF01063 Aminotransferase class IV Aaci_1016 PF03819 MazG nucleotide pyrophosphohydrolase domain Aaci_1017 PF01261 Xylose isomerase-like TIM barrel Aaci_1018 PF07690 Major Facilitator Superfamily Aaci_1019 PF05193 Peptidase M16 inactive domain Aaci_1020 PF00675 Insulinase (Peptidase family M16) Aaci_1020 PF05193 Peptidase M16 inactive domain Aaci_1021 PF12706 Beta-lactamase superfamily domain Aaci_1022 PF00291 Pyridoxal-phosphate dependent enzyme Aaci_1023 PF00288 GHMP kinases N terminal domain Aaci_1023 PF08544 GHMP kinases C terminal Aaci_1024 PF03061 Thioesterase superfamily Aaci_1025 PF00293 NUDIX domain Aaci_1026 PF07685 CobB/CobQ-like glutamine amidotransferase domain Aaci_1027 PF08245 Mur ligase middle domain Aaci_1027 PF08353 Aaci_1027 Aaci_1028 PF03960 ArsC family Aaci_1029 PF13563 2'-5' RNA ligase superfamily Aaci_1030 PF00753 Metallo-beta-lactamase superfamily Aaci_1031 PF01098 Aaci_1031 Aaci_1033 PF03009 Glycerophosphoryl diester phosphodiesterase family Aaci_1034 PF01098 Aaci_1034 Aaci_1035 PF00155 Aminotransferase class I and II Aaci_1037 PF08486 Aaci_1037 Aaci_1038 PF08741 Aaci_1038 Aaci_1039 PF01276 Orn/Lys/Arg decarboxylase, major domain Aaci_1039 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Aaci_1040 PF00578 AhpC/TSA family Aaci_1041 PF01521 Iron-sulphur cluster biosynthesis Aaci_1042 PF01966 HD domain Aaci_1043 PF09335 Aaci_1043 Aaci_1044 PF08827 Domain of unknown function (DUF1805) Aaci_1045 PF05343 M42 glutamyl aminopeptidase Aaci_1046 PF02681 Aaci_1046 Aaci_1047 PF00293 NUDIX domain Aaci_1048 PF01934 Protein of unknown function DUF86 Aaci_1049 PF06725 3D domain Aaci_1050 PF00877 NlpC/P60 family Aaci_1052 PF10787 Aaci_1052 Aaci_1053 PF00665 Integrase core domain Aaci_1054 PF06897 Aaci_1054 Aaci_1055 PF07859 alpha/beta hydrolase fold Aaci_1056 PF13231 Aaci_1056 Aaci_1057 PF00171 Aldehyde dehydrogenase family Aaci_1058 PF08141 Aaci_1058 Aaci_1060 PF01609 Transposase DDE domain Aaci_1060 PF14104 Aaci_1060 Aaci_1061 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Aaci_1061 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Aaci_1062 PF00589 Phage integrase family Aaci_1062 PF14659 Phage integrase, N-terminal SAM-like domain Aaci_1063 PF06114 Domain of unknown function (DUF955) Aaci_1064 PF01381 Helix-turn-helix Aaci_1064 PF13560 Helix-turn-helix domain Aaci_1065 PF01381 Helix-turn-helix Aaci_1066 PF13560 Helix-turn-helix domain Aaci_1067 PF01381 Helix-turn-helix Aaci_1068 PF01381 Helix-turn-helix Aaci_1073 PF12705 PD-(D/E)XK nuclease superfamily Aaci_1079 PF16793 Aaci_1079 Aaci_1080 PF00271 Helicase conserved C-terminal domain Aaci_1080 PF04851 Type III restriction enzyme, res subunit Aaci_1081 PF04542 Sigma-70 region 2 Aaci_1081 PF04545 Sigma-70, region 4 Aaci_1087 PF00712 DNA polymerase III beta subunit, N-terminal domain Aaci_1087 PF02767 DNA polymerase III beta subunit, central domain Aaci_1087 PF02768 DNA polymerase III beta subunit, C-terminal domain Aaci_1092 PF05037 Aaci_1092 Aaci_1096 PF05866 Endodeoxyribonuclease RusA Aaci_1097 PF13238 AAA domain Aaci_1099 PF00929 Exonuclease Aaci_1099 PF12843 Aaci_1099 Aaci_1102 PF00654 Voltage gated chloride channel Aaci_1103 PF00512 His Kinase A (phospho-acceptor) domain Aaci_1103 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_1104 PF00072 Response regulator receiver domain Aaci_1104 PF00486 Transcriptional regulatory protein, C terminal Aaci_1105 PF00394 Multicopper oxidase Aaci_1105 PF07731 Multicopper oxidase Aaci_1105 PF07732 Multicopper oxidase Aaci_1108 PF00578 AhpC/TSA family Aaci_1109 PF02683 Aaci_1109 Aaci_1111 PF07731 Multicopper oxidase Aaci_1111 PF07732 Multicopper oxidase Aaci_1112 PF02583 Metal-sensitive transcriptional repressor Aaci_1113 PF00122 E1-E2 ATPase Aaci_1113 PF00403 Heavy-metal-associated domain Aaci_1113 PF00702 haloacid dehalogenase-like hydrolase Aaci_1114 PF00403 Heavy-metal-associated domain Aaci_1115 PF09851 Aaci_1115 Aaci_1116 PF02049 Aaci_1116 Aaci_1117 PF00460 Flagella basal body rod protein Aaci_1117 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aaci_1118 PF00460 Flagella basal body rod protein Aaci_1120 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aaci_1121 PF01545 Cation efflux family Aaci_1122 PF01545 Cation efflux family Aaci_1122 PF16916 Aaci_1122 Aaci_1123 PF01022 Bacterial regulatory protein, arsR family Aaci_1125 PF08863 Aaci_1125 Aaci_1126 PF06094 AIG2-like family Aaci_1132 PF00145 C-5 cytosine-specific DNA methylase Aaci_1133 PF09517 Eco29kI restriction endonuclease Aaci_1135 PF04255 Protein of unknown function (DUF433) Aaci_1136 PF02086 D12 class N6 adenine-specific DNA methyltransferase Aaci_1138 PF04041 Domain of unknown function (DUF377) Aaci_1140 PF04542 Sigma-70 region 2 Aaci_1140 PF08281 Sigma-70, region 4 Aaci_1143 PF06094 AIG2-like family Aaci_1149 PF02195 ParB-like nuclease domain Aaci_1156 PF02195 ParB-like nuclease domain Aaci_1160 PF16935 Aaci_1160 Aaci_1161 PF01385 Aaci_1161 Aaci_1161 PF07282 Aaci_1161 Aaci_1163 PF02086 D12 class N6 adenine-specific DNA methyltransferase Aaci_1164 PF09992 Predicted periplasmic protein (DUF2233) Aaci_1165 PF02498 Aaci_1165 Aaci_1166 PF08281 Sigma-70, region 4 Aaci_1167 PF12846 AAA-like domain Aaci_1169 PF04307 Aaci_1169 Aaci_1171 PF12648 Aaci_1171 Aaci_1174 PF01464 Transglycosylase SLT domain Aaci_1175 PF00990 GGDEF domain Aaci_1176 PF13487 HD domain Aaci_1177 PF00482 Type II secretion system (T2SS), protein F Aaci_1182 PF04191 Phospholipid methyltransferase Aaci_1183 PF01935 Domain of unknown function DUF87 Aaci_1185 PF13814 Aaci_1185 Aaci_1188 PF00216 Bacterial DNA-binding protein Aaci_1190 PF10609 ParA/MinD ATPase like Aaci_1192 PF00563 EAL domain Aaci_1194 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Aaci_1196 PF00437 Type II/IV secretion system protein Aaci_1197 PF00482 Type II secretion system (T2SS), protein F Aaci_1200 PF12224 Aaci_1200 Aaci_1201 PF06094 AIG2-like family Aaci_1205 PF01850 PIN domain Aaci_1206 PF04014 Antidote-toxin recognition MazE Aaci_1209 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_1209 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_1209 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_1210 PF00378 Enoyl-CoA hydratase/isomerase family Aaci_1211 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_1213 PF09594 Aaci_1213 Aaci_1214 PF00356 Bacterial regulatory proteins, lacI family Aaci_1214 PF13377 Periplasmic binding protein-like domain Aaci_1215 PF01547 Bacterial extracellular solute-binding protein Aaci_1216 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_1217 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_1218 PF00703 Glycosyl hydrolases family 2 Aaci_1218 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Aaci_1218 PF02837 Glycosyl hydrolases family 2, sugar binding domain Aaci_1218 PF02929 Beta galactosidase small chain Aaci_1218 PF16353 Aaci_1218 Aaci_1219 PF00117 Glutamine amidotransferase class-I Aaci_1220 PF00425 chorismate binding enzyme Aaci_1220 PF04715 Anthranilate synthase component I, N terminal region Aaci_1222 PF01118 Semialdehyde dehydrogenase, NAD binding domain Aaci_1222 PF02774 Semialdehyde dehydrogenase, dimerisation domain Aaci_1223 PF00696 Amino acid kinase family Aaci_1224 PF00202 Aminotransferase class-III Aaci_1225 PF00583 Acetyltransferase (GNAT) family Aaci_1226 PF00310 Glutamine amidotransferases class-II Aaci_1226 PF01493 GXGXG motif Aaci_1226 PF01645 Conserved region in glutamate synthase Aaci_1226 PF04898 Glutamate synthase central domain Aaci_1227 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Aaci_1227 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Aaci_1228 PF00764 Arginosuccinate synthase Aaci_1229 PF00206 Lyase Aaci_1229 PF14698 Argininosuccinate lyase C-terminal Aaci_1230 PF00696 Amino acid kinase family Aaci_1230 PF01842 ACT domain Aaci_1230 PF13840 ACT domain Aaci_1231 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Aaci_1231 PF01842 ACT domain Aaci_1231 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Aaci_1232 PF00266 Aminotransferase class-V Aaci_1233 PF13242 HAD-hyrolase-like Aaci_1234 PF00176 SNF2 family N-terminal domain Aaci_1234 PF00271 Helicase conserved C-terminal domain Aaci_1234 PF13020 Aaci_1234 Aaci_1235 PF02086 D12 class N6 adenine-specific DNA methyltransferase Aaci_1235 PF06634 Aaci_1235 Aaci_1236 PF04465 Aaci_1236 Aaci_1237 PF13289 Aaci_1237 Aaci_1238 PF01935 Domain of unknown function DUF87 Aaci_1239 PF01609 Transposase DDE domain Aaci_1240 PF16142 Aaci_1240 Aaci_1243 PF00392 Bacterial regulatory proteins, gntR family Aaci_1244 PF00005 ABC transporter Aaci_1246 PF00581 Rhodanese-like domain Aaci_1247 PF00085 Thioredoxin Aaci_1248 PF03625 Domain of unknown function DUF302 Aaci_1249 PF13030 Aaci_1249 Aaci_1250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Aaci_1250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aaci_1251 PF03358 NADPH-dependent FMN reductase Aaci_1252 PF00392 Bacterial regulatory proteins, gntR family Aaci_1252 PF07729 FCD domain Aaci_1253 PF01184 Aaci_1253 Aaci_1254 PF00501 AMP-binding enzyme Aaci_1254 PF13193 AMP-binding enzyme C-terminal domain Aaci_1254 PF16177 Aaci_1254 Aaci_1255 PF06949 Aaci_1255 Aaci_1256 PF06133 Protein of unknown function (DUF964) Aaci_1257 PF08858 IDEAL domain Aaci_1259 PF11127 Protein of unknown function (DUF2892) Aaci_1260 PF00574 Clp protease Aaci_1261 PF00266 Aminotransferase class-V Aaci_1262 PF02568 Thiamine biosynthesis protein (ThiI) Aaci_1262 PF02926 THUMP domain Aaci_1264 PF13921 Myb-like DNA-binding domain Aaci_1265 PF05504 Spore germination B3/ GerAC like, C-terminal Aaci_1266 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_1267 PF10079 Aaci_1267 Aaci_1268 PF02381 MraZ protein Aaci_1269 PF01795 MraW methylase family Aaci_1270 PF04977 Septum formation initiator Aaci_1271 PF00905 Penicillin binding protein transpeptidase domain Aaci_1271 PF03717 Penicillin-binding Protein dimerisation domain Aaci_1271 PF03793 PASTA domain Aaci_1272 PF00905 Penicillin binding protein transpeptidase domain Aaci_1272 PF03717 Penicillin-binding Protein dimerisation domain Aaci_1272 PF03793 PASTA domain Aaci_1273 PF01225 Mur ligase family, catalytic domain Aaci_1273 PF02875 Mur ligase family, glutamate ligase domain Aaci_1273 PF08245 Mur ligase middle domain Aaci_1274 PF00953 Glycosyl transferase family 4 Aaci_1274 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Aaci_1275 PF02875 Mur ligase family, glutamate ligase domain Aaci_1275 PF08245 Mur ligase middle domain Aaci_1276 PF01098 Aaci_1276 Aaci_1277 PF03033 Glycosyltransferase family 28 N-terminal domain Aaci_1277 PF04101 Glycosyltransferase family 28 C-terminal domain Aaci_1278 PF01565 FAD binding domain Aaci_1278 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Aaci_1280 PF13738 Pyridine nucleotide-disulphide oxidoreductase Aaci_1282 PF00239 Resolvase, N terminal domain Aaci_1282 PF07508 Recombinase Aaci_1282 PF13408 Recombinase zinc beta ribbon domain Aaci_1283 PF03799 Cell division protein FtsQ Aaci_1283 PF08478 POTRA domain, FtsQ-type Aaci_1284 PF05949 Bacterial protein of unknown function (DUF881) Aaci_1285 PF05949 Bacterial protein of unknown function (DUF881) Aaci_1286 PF06947 Aaci_1286 Aaci_1287 PF02491 SHS2 domain inserted in FTSA Aaci_1287 PF14450 Cell division protein FtsA Aaci_1288 PF00091 Tubulin/FtsZ family, GTPase domain Aaci_1288 PF12327 FtsZ family, C-terminal domain Aaci_1289 PF03419 Aaci_1289 Aaci_1290 PF04542 Sigma-70 region 2 Aaci_1290 PF04545 Sigma-70, region 4 Aaci_1291 PF04539 Sigma-70 region 3 Aaci_1291 PF04542 Sigma-70 region 2 Aaci_1291 PF04545 Sigma-70, region 4 Aaci_1292 PF05239 PRC-barrel domain Aaci_1293 PF02578 Multi-copper polyphenol oxidoreductase laccase Aaci_1294 PF01168 Alanine racemase, N-terminal domain Aaci_1295 PF02325 Aaci_1295 Aaci_1297 PF05103 DivIVA protein Aaci_1300 PF01258 Prokaryotic dksA/traR C4-type zinc finger Aaci_1301 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) Aaci_1302 PF01252 Aaci_1302 Aaci_1303 PF00849 RNA pseudouridylate synthase Aaci_1304 PF00156 Phosphoribosyl transferase domain Aaci_1305 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Aaci_1305 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Aaci_1306 PF01979 Amidohydrolase family Aaci_1307 PF00117 Glutamine amidotransferase class-I Aaci_1307 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Aaci_1308 PF02142 MGS-like domain Aaci_1308 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Aaci_1308 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Aaci_1309 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Aaci_1310 PF00156 Phosphoribosyl transferase domain Aaci_1311 PF01266 FAD dependent oxidoreductase Aaci_1312 PF07690 Major Facilitator Superfamily Aaci_1313 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Aaci_1313 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Aaci_1314 PF05670 Aaci_1314 Aaci_1314 PF05833 Fibronectin-binding protein A N-terminus (FbpA) Aaci_1315 PF00122 E1-E2 ATPase Aaci_1315 PF00689 Cation transporting ATPase, C-terminus Aaci_1315 PF00690 Cation transporter/ATPase, N-terminus Aaci_1315 PF00702 haloacid dehalogenase-like hydrolase Aaci_1316 PF03755 Aaci_1316 Aaci_1316 PF08340 Aaci_1316 Aaci_1317 PF01192 RNA polymerase Rpb6 Aaci_1318 PF02441 Flavoprotein Aaci_1318 PF04127 DNA / pantothenate metabolism flavoprotein Aaci_1319 PF00270 DEAD/DEAH box helicase Aaci_1319 PF00271 Helicase conserved C-terminal domain Aaci_1320 PF01327 Polypeptide deformylase Aaci_1321 PF00551 Formyl transferase Aaci_1321 PF02911 Formyl transferase, C-terminal domain Aaci_1322 PF01029 NusB family Aaci_1322 PF01189 NOL1/NOP2/sun family Aaci_1323 PF04055 Radical SAM superfamily Aaci_1323 PF13394 4Fe-4S single cluster domain Aaci_1324 PF13672 Protein phosphatase 2C Aaci_1325 PF00069 Protein kinase domain Aaci_1325 PF03793 PASTA domain Aaci_1326 PF03193 Protein of unknown function, DUF258 Aaci_1326 PF16745 Aaci_1326 Aaci_1327 PF00834 Ribulose-phosphate 3 epimerase family Aaci_1329 PF00830 Ribosomal L28 family Aaci_1330 PF00270 DEAD/DEAH box helicase Aaci_1330 PF00271 Helicase conserved C-terminal domain Aaci_1330 PF17191 Aaci_1330 Aaci_1331 PF00269 Small, acid-soluble spore proteins, alpha/beta type Aaci_1332 PF02666 Aaci_1332 Aaci_1333 PF01370 NAD dependent epimerase/dehydratase family Aaci_1334 PF00534 Glycosyl transferases group 1 Aaci_1334 PF13439 Glycosyltransferase Family 4 Aaci_1335 PF01425 Amidase Aaci_1336 PF03602 Conserved hypothetical protein 95 Aaci_1337 PF01467 Cytidylyltransferase Aaci_1338 PF01734 Patatin-like phospholipase Aaci_1339 PF02620 Aaci_1339 Aaci_1340 PF01783 Ribosomal L32p protein family Aaci_1341 PF08220 DeoR-like helix-turn-helix domain Aaci_1342 PF02504 Fatty acid synthesis protein Aaci_1343 PF00698 Acyl transferase domain Aaci_1344 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_1345 PF00550 Phosphopantetheine attachment site Aaci_1346 PF00109 Beta-ketoacyl synthase, N-terminal domain Aaci_1346 PF02801 Beta-ketoacyl synthase, C-terminal domain Aaci_1347 PF00035 Double-stranded RNA binding motif Aaci_1347 PF14622 Ribonuclease-III-like Aaci_1348 PF02463 RecF/RecN/SMC N terminal domain Aaci_1348 PF06470 SMC proteins Flexible Hinge Domain Aaci_1349 PF00448 SRP54-type protein, GTPase domain Aaci_1349 PF02881 SRP54-type protein, helical bundle domain Aaci_1350 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Aaci_1351 PF00448 SRP54-type protein, GTPase domain Aaci_1351 PF02881 SRP54-type protein, helical bundle domain Aaci_1351 PF02978 Signal peptide binding domain Aaci_1352 PF00886 Ribosomal protein S16 Aaci_1353 PF13083 KH domain Aaci_1354 PF11068 YlqD protein Aaci_1355 PF01782 RimM N-terminal domain Aaci_1355 PF05239 PRC-barrel domain Aaci_1356 PF01746 tRNA (Guanine-1)-methyltransferase Aaci_1357 PF00425 chorismate binding enzyme Aaci_1357 PF01063 Aminotransferase class IV Aaci_1358 PF00849 RNA pseudouridylate synthase Aaci_1358 PF01479 S4 domain Aaci_1359 PF13279 Thioesterase-like superfamily Aaci_1360 PF01551 Peptidase family M23 Aaci_1361 PF03061 Thioesterase superfamily Aaci_1362 PF04932 Aaci_1362 Aaci_1366 PF01245 Ribosomal protein L19 Aaci_1367 PF01926 50S ribosome-binding GTPase Aaci_1368 PF01351 Ribonuclease HII Aaci_1370 PF01312 FlhB HrpN YscU SpaS Family Aaci_1371 PF02021 Uncharacterised protein family UPF0102 Aaci_1372 PF01522 Polysaccharide deacetylase Aaci_1373 PF01078 Magnesium chelatase, subunit ChlI Aaci_1373 PF13335 Aaci_1373 Aaci_1373 PF13541 Subunit ChlI of Mg-chelatase Aaci_1375 PF00549 CoA-ligase Aaci_1375 PF08442 ATP-grasp domain Aaci_1376 PF00549 CoA-ligase Aaci_1376 PF02629 CoA binding domain Aaci_1377 PF02481 DNA recombination-mediator protein A Aaci_1378 PF03734 L,D-transpeptidase catalytic domain Aaci_1379 PF01476 LysM domain Aaci_1379 PF07486 Cell Wall Hydrolase Aaci_1380 PF03690 Aaci_1380 Aaci_1381 PF01131 DNA topoisomerase Aaci_1381 PF01396 Aaci_1381 Aaci_1381 PF01751 Toprim domain Aaci_1382 PF01134 Glucose inhibited division protein A Aaci_1383 PF00589 Phage integrase family Aaci_1383 PF02899 Phage integrase, N-terminal SAM-like domain Aaci_1384 PF00227 Proteasome subunit Aaci_1385 PF07724 AAA domain (Cdc48 subfamily) Aaci_1385 PF10431 C-terminal, D2-small domain, of ClpB protein Aaci_1386 PF00460 Flagella basal body rod protein Aaci_1387 PF00460 Flagella basal body rod protein Aaci_1387 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aaci_1388 PF02049 Aaci_1388 Aaci_1389 PF01514 Secretory protein of YscJ/FliF family Aaci_1389 PF08345 Aaci_1389 Aaci_1390 PF01706 FliG C-terminal domain Aaci_1390 PF14841 FliG middle domain Aaci_1390 PF14842 FliG N-terminal domain Aaci_1391 PF02108 Aaci_1391 Aaci_1392 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aaci_1392 PF02874 ATP synthase alpha/beta family, beta-barrel domain Aaci_1394 PF02321 Outer membrane efflux protein Aaci_1394 PF03448 MgtE intracellular N domain Aaci_1395 PF02120 Flagellar hook-length control protein FliK Aaci_1396 PF03963 Aaci_1396 Aaci_1399 PF00460 Flagella basal body rod protein Aaci_1399 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aaci_1400 PF06289 Aaci_1400 Aaci_1401 PF03748 Aaci_1401 Aaci_1402 PF01052 Surface presentation of antigens (SPOA) Aaci_1402 PF02154 Flagellar motor switch protein FliM Aaci_1403 PF01052 Surface presentation of antigens (SPOA) Aaci_1403 PF04509 CheC-like family Aaci_1404 PF00072 Response regulator receiver domain Aaci_1405 PF04347 Aaci_1405 Aaci_1406 PF00813 Aaci_1406 Aaci_1407 PF01313 Aaci_1407 Aaci_1408 PF01311 Aaci_1408 Aaci_1409 PF01312 FlhB HrpN YscU SpaS Family Aaci_1410 PF00771 FHIPEP family Aaci_1411 PF00448 SRP54-type protein, GTPase domain Aaci_1412 PF13614 AAA domain Aaci_1414 PF01584 CheW-like domain Aaci_1414 PF01627 Hpt domain Aaci_1414 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_1414 PF02895 Signal transducing histidine kinase, homodimeric domain Aaci_1414 PF07194 P2 response regulator binding domain Aaci_1415 PF01584 CheW-like domain Aaci_1416 PF04509 CheC-like family Aaci_1416 PF13690 Chemotaxis phosphatase CheX Aaci_1417 PF03975 CheD chemotactic sensory transduction Aaci_1419 PF00318 Ribosomal protein S2 Aaci_1420 PF00889 Elongation factor TS Aaci_1421 PF00696 Amino acid kinase family Aaci_1422 PF01765 Ribosome recycling factor Aaci_1423 PF01255 Putative undecaprenyl diphosphate synthase Aaci_1424 PF01148 Cytidylyltransferase family Aaci_1425 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Aaci_1425 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal Aaci_1425 PF13288 DXP reductoisomerase C-terminal domain Aaci_1426 PF02163 Peptidase family M50 Aaci_1426 PF13180 PDZ domain Aaci_1427 PF00929 Exonuclease Aaci_1427 PF02811 PHP domain Aaci_1427 PF07733 Bacterial DNA polymerase III alpha subunit Aaci_1427 PF14579 Helix-hairpin-helix motif Aaci_1428 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aaci_1429 PF00800 Prephenate dehydratase Aaci_1430 PF00009 Elongation factor Tu GTP binding domain Aaci_1430 PF00679 Elongation factor G C-terminus Aaci_1430 PF03144 Elongation factor Tu domain 2 Aaci_1430 PF14492 Elongation Factor G, domain II Aaci_1431 PF02576 Uncharacterised BCR, YhbC family COG0779 Aaci_1431 PF17384 Aaci_1431 Aaci_1432 PF00575 S1 RNA binding domain Aaci_1432 PF08529 NusA N-terminal domain Aaci_1432 PF13184 NusA-like KH domain Aaci_1433 PF04296 Protein of unknown function (DUF448) Aaci_1435 PF00009 Elongation factor Tu GTP binding domain Aaci_1435 PF04760 Translation initiation factor IF-2, N-terminal region Aaci_1435 PF11987 Translation-initiation factor 2 Aaci_1436 PF02033 Ribosome-binding factor A Aaci_1437 PF01368 DHH family Aaci_1437 PF02272 DHHA1 domain Aaci_1438 PF01509 TruB family pseudouridylate synthase (N terminal domain) Aaci_1438 PF16198 Aaci_1438 Aaci_1439 PF01687 Riboflavin kinase Aaci_1439 PF06574 FAD synthetase Aaci_1440 PF06094 AIG2-like family Aaci_1441 PF00312 Ribosomal protein S15 Aaci_1442 PF00013 KH domain Aaci_1442 PF00575 S1 RNA binding domain Aaci_1442 PF01138 3' exoribonuclease family, domain 1 Aaci_1442 PF03725 3' exoribonuclease family, domain 2 Aaci_1442 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Aaci_1443 PF01522 Polysaccharide deacetylase Aaci_1444 PF00675 Insulinase (Peptidase family M16) Aaci_1444 PF05193 Peptidase M16 inactive domain Aaci_1445 PF00692 dUTPase Aaci_1446 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Aaci_1446 PF16924 Aaci_1446 Aaci_1447 PF02441 Flavoprotein Aaci_1448 PF01118 Semialdehyde dehydrogenase, NAD binding domain Aaci_1448 PF02774 Semialdehyde dehydrogenase, dimerisation domain Aaci_1449 PF00696 Amino acid kinase family Aaci_1449 PF13840 ACT domain Aaci_1450 PF00701 Dihydrodipicolinate synthetase family Aaci_1451 PF10672 S-adenosylmethionine-dependent methyltransferase Aaci_1452 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_1452 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_1452 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_1453 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Aaci_1453 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Aaci_1454 PF00171 Aldehyde dehydrogenase family Aaci_1455 PF16113 Aaci_1455 Aaci_1456 PF00501 AMP-binding enzyme Aaci_1456 PF13193 AMP-binding enzyme C-terminal domain Aaci_1457 PF00108 Thiolase, N-terminal domain Aaci_1457 PF02803 Thiolase, C-terminal domain Aaci_1458 PF00106 short chain dehydrogenase Aaci_1459 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Aaci_1459 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Aaci_1460 PF07521 RNA-metabolising metallo-beta-lactamase Aaci_1460 PF12706 Beta-lactamase superfamily domain Aaci_1461 PF00574 Clp protease Aaci_1462 PF14035 Aaci_1462 Aaci_1463 PF01580 FtsK/SpoIIIE family Aaci_1463 PF09397 Ftsk gamma domain Aaci_1467 PF11868 Aaci_1467 Aaci_1468 PF13413 Helix-turn-helix domain Aaci_1468 PF13464 Aaci_1468 Aaci_1469 PF04461 Protein of unknown function (DUF520) Aaci_1470 PF01066 CDP-alcohol phosphatidyltransferase Aaci_1471 PF00994 Probable molybdopterin binding domain Aaci_1471 PF02464 Competence-damaged protein Aaci_1472 PF00270 DEAD/DEAH box helicase Aaci_1472 PF00271 Helicase conserved C-terminal domain Aaci_1472 PF03880 DbpA RNA binding domain Aaci_1473 PF00154 recA bacterial DNA recombination protein Aaci_1474 PF02631 RecX family Aaci_1475 PF00013 KH domain Aaci_1475 PF01966 HD domain Aaci_1475 PF12072 Aaci_1475 Aaci_1476 PF04232 Stage V sporulation protein S (SpoVS) Aaci_1477 PF01244 Membrane dipeptidase (Peptidase family M19) Aaci_1478 PF10628 Aaci_1478 Aaci_1479 PF14398 Aaci_1479 Aaci_1480 PF14398 Aaci_1480 Aaci_1481 PF14395 Aaci_1481 Aaci_1482 PF14398 Aaci_1482 Aaci_1484 PF00919 Uncharacterized protein family UPF0004 Aaci_1484 PF01938 TRAM domain Aaci_1484 PF04055 Radical SAM superfamily Aaci_1485 PF06133 Protein of unknown function (DUF964) Aaci_1486 PF00488 MutS domain V Aaci_1486 PF01624 MutS domain I Aaci_1486 PF05188 MutS domain II Aaci_1486 PF05190 MutS family domain IV Aaci_1486 PF05192 MutS domain III Aaci_1487 PF01119 DNA mismatch repair protein, C-terminal domain Aaci_1487 PF08676 MutL C terminal dimerisation domain Aaci_1487 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_1488 PF04445 Putative SAM-dependent methyltransferase Aaci_1489 PF01715 IPP transferase Aaci_1490 PF17209 Aaci_1490 Aaci_1493 PF05037 Aaci_1493 Aaci_1497 PF01609 Transposase DDE domain Aaci_1497 PF14104 Aaci_1497 Aaci_1498 PF05866 Endodeoxyribonuclease RusA Aaci_1499 PF14239 Aaci_1499 Aaci_1499 PF14279 Aaci_1499 Aaci_1500 PF00929 Exonuclease Aaci_1500 PF12843 Aaci_1500 Aaci_1502 PF08281 Sigma-70, region 4 Aaci_1503 PF03412 Peptidase C39 family Aaci_1504 PF16576 Aaci_1504 Aaci_1505 PF00005 ABC transporter Aaci_1506 PF02687 Aaci_1506 Aaci_1506 PF12704 MacB-like periplasmic core domain Aaci_1508 PF01695 IstB-like ATP binding protein Aaci_1510 PF01609 Transposase DDE domain Aaci_1510 PF14104 Aaci_1510 Aaci_1511 PF00872 Aaci_1511 Aaci_1513 PF00872 Aaci_1513 Aaci_1518 PF01527 Transposase Aaci_1519 PF00665 Integrase core domain Aaci_1519 PF13276 Aaci_1519 Aaci_1522 PF00872 Aaci_1522 Aaci_1523 PF07690 Major Facilitator Superfamily Aaci_1525 PF08863 Aaci_1525 Aaci_1527 PF00132 Bacterial transferase hexapeptide (six repeats) Aaci_1528 PF07690 Major Facilitator Superfamily Aaci_1529 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_1529 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_1529 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_1531 PF00872 Aaci_1531 Aaci_1534 PF04542 Sigma-70 region 2 Aaci_1534 PF08281 Sigma-70, region 4 Aaci_1535 PF01909 Nucleotidyltransferase domain Aaci_1536 PF13488 Aaci_1536 Aaci_1536 PF13546 Aaci_1536 Aaci_1539 PF00872 Aaci_1539 Aaci_1544 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aaci_1547 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Aaci_1550 PF00872 Aaci_1550 Aaci_1551 PF04480 Protein of unknown function (DUF559) Aaci_1551 PF13086 AAA domain Aaci_1551 PF13087 AAA domain Aaci_1551 PF13195 Aaci_1551 Aaci_1552 PF01609 Transposase DDE domain Aaci_1554 PF00665 Integrase core domain Aaci_1554 PF13936 Helix-turn-helix domain Aaci_1555 PF01695 IstB-like ATP binding protein Aaci_1557 PF00180 Isocitrate/isopropylmalate dehydrogenase Aaci_1558 PF03323 Aaci_1558 Aaci_1559 PF05504 Spore germination B3/ GerAC like, C-terminal Aaci_1561 PF03845 Aaci_1561 Aaci_1562 PF03323 Aaci_1562 Aaci_1563 PF16363 Aaci_1563 Aaci_1564 PF01943 Aaci_1564 Aaci_1564 PF14667 Polysaccharide biosynthesis C-terminal domain Aaci_1566 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_1567 PF01926 50S ribosome-binding GTPase Aaci_1570 PF01926 50S ribosome-binding GTPase Aaci_1570 PF13167 Aaci_1570 Aaci_1570 PF16360 Aaci_1570 Aaci_1571 PF06838 Methionine gamma-lyase Aaci_1572 PF13411 MerR HTH family regulatory protein Aaci_1573 PF00120 Glutamine synthetase, catalytic domain Aaci_1573 PF03951 Glutamine synthetase, beta-Grasp domain Aaci_1574 PF00356 Bacterial regulatory proteins, lacI family Aaci_1574 PF13377 Periplasmic binding protein-like domain Aaci_1575 PF04295 Aaci_1575 Aaci_1575 PF08666 SAF domain Aaci_1576 PF04962 KduI/IolB family Aaci_1577 PF01232 Mannitol dehydrogenase Rossmann domain Aaci_1577 PF08125 Mannitol dehydrogenase C-terminal domain Aaci_1578 PF00083 Sugar (and other) transporter Aaci_1579 PF00717 Peptidase S24-like Aaci_1579 PF01726 LexA DNA binding domain Aaci_1580 PF08282 haloacid dehalogenase-like hydrolase Aaci_1581 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Aaci_1581 PF03129 Anticodon binding domain Aaci_1583 PF02219 Methylenetetrahydrofolate reductase Aaci_1583 PF02574 Homocysteine S-methyltransferase Aaci_1585 PF00990 GGDEF domain Aaci_1588 PF00011 Hsp20/alpha crystallin family Aaci_1590 PF00766 Electron transfer flavoprotein FAD-binding domain Aaci_1590 PF01012 Electron transfer flavoprotein domain Aaci_1591 PF01012 Electron transfer flavoprotein domain Aaci_1592 PF00440 Bacterial regulatory proteins, tetR family Aaci_1592 PF08359 YsiA-like protein, C-terminal region Aaci_1593 PF02754 Aaci_1593 Aaci_1593 PF13183 4Fe-4S dicluster domain Aaci_1594 PF00378 Enoyl-CoA hydratase/isomerase family Aaci_1594 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Aaci_1594 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aaci_1595 PF00108 Thiolase, N-terminal domain Aaci_1595 PF02803 Thiolase, C-terminal domain Aaci_1596 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_1596 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_1596 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_1597 PF00501 AMP-binding enzyme Aaci_1597 PF13193 AMP-binding enzyme C-terminal domain Aaci_1598 PF03061 Thioesterase superfamily Aaci_1599 PF00317 Ribonucleotide reductase, all-alpha domain Aaci_1599 PF02867 Ribonucleotide reductase, barrel domain Aaci_1599 PF03477 ATP cone domain Aaci_1600 PF00268 Ribonucleotide reductase, small chain Aaci_1601 PF13520 Amino acid permease Aaci_1602 PF12805 Aaci_1602 Aaci_1602 PF13515 Aaci_1602 Aaci_1603 PF09992 Predicted periplasmic protein (DUF2233) Aaci_1605 PF00892 EamA-like transporter family Aaci_1606 PF03618 Aaci_1606 Aaci_1607 PF00571 CBS domain Aaci_1607 PF08279 HTH domain Aaci_1608 PF00391 PEP-utilising enzyme, mobile domain Aaci_1608 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Aaci_1608 PF02896 PEP-utilising enzyme, TIM barrel domain Aaci_1609 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Aaci_1610 PF03807 NADP oxidoreductase coenzyme F420-dependent Aaci_1610 PF09130 Domain of unknown function (DUF1932) Aaci_1611 PF03737 Demethylmenaquinone methyltransferase Aaci_1612 PF02585 GlcNAc-PI de-N-acetylase Aaci_1614 PF00392 Bacterial regulatory proteins, gntR family Aaci_1614 PF07729 FCD domain Aaci_1615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aaci_1616 PF04909 Amidohydrolase Aaci_1617 PF01361 Tautomerase enzyme Aaci_1619 PF00682 HMGL-like Aaci_1619 PF07836 DmpG-like communication domain Aaci_1620 PF01118 Semialdehyde dehydrogenase, NAD binding domain Aaci_1620 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation Aaci_1621 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aaci_1622 PF00171 Aldehyde dehydrogenase family Aaci_1623 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Aaci_1624 PF01614 Bacterial transcriptional regulator Aaci_1624 PF09339 IclR helix-turn-helix domain Aaci_1625 PF01494 FAD binding domain Aaci_1626 PF01066 CDP-alcohol phosphatidyltransferase Aaci_1627 PF12804 MobA-like NTP transferase domain Aaci_1628 PF00120 Glutamine synthetase, catalytic domain Aaci_1628 PF03951 Glutamine synthetase, beta-Grasp domain Aaci_1629 PF01931 Protein of unknown function DUF84 Aaci_1630 PF12831 FAD dependent oxidoreductase Aaci_1631 PF01566 Aaci_1631 Aaci_1632 PF01588 Putative tRNA binding domain Aaci_1633 PF11187 Protein of unknown function (DUF2974) Aaci_1635 PF01225 Mur ligase family, catalytic domain Aaci_1635 PF02875 Mur ligase family, glutamate ligase domain Aaci_1635 PF08245 Mur ligase middle domain Aaci_1636 PF01820 D-ala D-ala ligase N-terminus Aaci_1636 PF07478 D-ala D-ala ligase C-terminus Aaci_1637 PF07261 Replication initiation and membrane attachment Aaci_1638 PF00152 tRNA synthetases class II (D, K and N) Aaci_1638 PF01336 OB-fold nucleic acid binding domain Aaci_1639 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_1639 PF01434 Peptidase family M41 Aaci_1642 PF14084 Aaci_1642 Aaci_1643 PF01975 Survival protein SurE Aaci_1645 PF01979 Amidohydrolase family Aaci_1646 PF01008 Initiation factor 2 subunit family Aaci_1647 PF01048 Phosphorylase superfamily Aaci_1649 PF01068 ATP dependent DNA ligase domain Aaci_1649 PF04679 ATP dependent DNA ligase C terminal region Aaci_1650 PF02735 Ku70/Ku80 beta-barrel domain Aaci_1651 PF00929 Exonuclease Aaci_1651 PF04851 Type III restriction enzyme, res subunit Aaci_1651 PF13307 Helicase C-terminal domain Aaci_1653 PF02237 Biotin protein ligase C terminal domain Aaci_1653 PF03099 Biotin/lipoate A/B protein ligase family Aaci_1653 PF08279 HTH domain Aaci_1654 PF01743 Poly A polymerase head domain Aaci_1654 PF13735 tRNA nucleotidyltransferase domain 2 putative Aaci_1655 PF00534 Glycosyl transferases group 1 Aaci_1655 PF13439 Glycosyltransferase Family 4 Aaci_1656 PF01113 Dihydrodipicolinate reductase, N-terminus Aaci_1656 PF05173 Dihydrodipicolinate reductase, C-terminus Aaci_1657 PF03819 MazG nucleotide pyrophosphohydrolase domain Aaci_1658 PF01609 Transposase DDE domain Aaci_1658 PF05598 Aaci_1658 Aaci_1660 PF02673 Aaci_1660 Aaci_1662 PF02588 Aaci_1662 Aaci_1662 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Aaci_1663 PF08858 IDEAL domain Aaci_1663 PF08864 UPF0302 domain Aaci_1665 PF02153 Prephenate dehydrogenase Aaci_1666 PF00793 DAHP synthetase I family Aaci_1667 PF00290 Tryptophan synthase alpha chain Aaci_1668 PF00291 Pyridoxal-phosphate dependent enzyme Aaci_1669 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Aaci_1670 PF00218 Indole-3-glycerol phosphate synthase Aaci_1671 PF00591 Glycosyl transferase family, a/b domain Aaci_1671 PF02885 Glycosyl transferase family, helical bundle domain Aaci_1672 PF07736 Chorismate mutase type I Aaci_1673 PF01761 3-dehydroquinate synthase Aaci_1674 PF01264 Chorismate synthase Aaci_1675 PF05343 M42 glutamyl aminopeptidase Aaci_1676 PF05343 M42 glutamyl aminopeptidase Aaci_1677 PF05343 M42 glutamyl aminopeptidase Aaci_1678 PF00849 RNA pseudouridylate synthase Aaci_1678 PF01479 S4 domain Aaci_1681 PF01476 LysM domain Aaci_1681 PF13406 Transglycosylase SLT domain Aaci_1683 PF07728 AAA domain (dynein-related subfamily) Aaci_1685 PF00364 Biotin-requiring enzyme Aaci_1686 PF00912 Transglycosylase Aaci_1687 PF00571 CBS domain Aaci_1689 PF01739 CheR methyltransferase, SAM binding domain Aaci_1689 PF03705 CheR methyltransferase, all-alpha domain Aaci_1690 PF01734 Patatin-like phospholipase Aaci_1691 PF00334 Nucleoside diphosphate kinase Aaci_1692 PF00348 Polyprenyl synthetase Aaci_1693 PF01209 ubiE/COQ5 methyltransferase family Aaci_1694 PF07307 Aaci_1694 Aaci_1695 PF02081 Tryptophan RNA-binding attenuator protein Aaci_1696 PF00107 Zinc-binding dehydrogenase Aaci_1696 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_1697 PF09547 Aaci_1697 Aaci_1698 PF01597 Glycine cleavage H-protein Aaci_1699 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Aaci_1699 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Aaci_1700 PF02660 Aaci_1700 Aaci_1701 PF01926 50S ribosome-binding GTPase Aaci_1701 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Aaci_1703 PF00575 S1 RNA binding domain Aaci_1704 PF01553 Acyltransferase Aaci_1705 PF02224 Cytidylate kinase Aaci_1707 PF07238 PilZ domain Aaci_1707 PF12945 Flagellar protein YcgR Aaci_1708 PF14620 Aaci_1708 Aaci_1709 PF01471 Putative peptidoglycan binding domain Aaci_1709 PF07486 Cell Wall Hydrolase Aaci_1711 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Aaci_1711 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Aaci_1712 PF05389 Negative regulator of genetic competence (MecA) Aaci_1713 PF00356 Bacterial regulatory proteins, lacI family Aaci_1713 PF13377 Periplasmic binding protein-like domain Aaci_1715 PF13245 Part of AAA domain Aaci_1715 PF13538 UvrD-like helicase C-terminal domain Aaci_1716 PF00149 Calcineurin-like phosphoesterase Aaci_1717 PF08241 Methyltransferase domain Aaci_1719 PF13365 Trypsin-like peptidase domain Aaci_1721 PF10977 Aaci_1721 Aaci_1722 PF13367 Aaci_1722 Aaci_1724 PF02146 Sir2 family Aaci_1725 PF01381 Helix-turn-helix Aaci_1727 PF00512 His Kinase A (phospho-acceptor) domain Aaci_1727 PF00672 HAMP domain Aaci_1727 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_1727 PF08448 PAS fold Aaci_1728 PF00072 Response regulator receiver domain Aaci_1728 PF00486 Transcriptional regulatory protein, C terminal Aaci_1729 PF09580 Aaci_1729 Aaci_1730 PF00849 RNA pseudouridylate synthase Aaci_1730 PF01479 S4 domain Aaci_1732 PF07670 Nucleoside recognition Aaci_1733 PF09579 Aaci_1733 Aaci_1734 PF11167 Aaci_1734 Aaci_1735 PF04079 Putative transcriptional regulators (Ypuh-like) Aaci_1736 PF02616 ScpA/B protein Aaci_1740 PF14097 Aaci_1740 Aaci_1741 PF03862 Aaci_1741 Aaci_1742 PF07451 Stage V sporulation protein AD (SpoVAD) Aaci_1743 PF03862 Aaci_1743 Aaci_1744 PF04539 Sigma-70 region 3 Aaci_1744 PF04542 Sigma-70 region 2 Aaci_1744 PF04545 Sigma-70, region 4 Aaci_1745 PF13581 Histidine kinase-like ATPase domain Aaci_1746 PF01740 STAS domain Aaci_1747 PF12844 Helix-turn-helix domain Aaci_1747 PF13432 Tetratricopeptide repeat Aaci_1748 PF00768 D-alanyl-D-alanine carboxypeptidase Aaci_1748 PF07943 Penicillin-binding protein 5, C-terminal domain Aaci_1749 PF01676 Metalloenzyme superfamily Aaci_1750 PF00589 Phage integrase family Aaci_1750 PF02899 Phage integrase, N-terminal SAM-like domain Aaci_1751 PF12647 Aaci_1751 Aaci_1752 PF01944 Aaci_1752 Aaci_1754 PF00293 NUDIX domain Aaci_1755 PF01546 Peptidase family M20/M25/M40 Aaci_1757 PF04055 Radical SAM superfamily Aaci_1757 PF16881 Aaci_1757 Aaci_1758 PF01967 MoaC family Aaci_1759 PF02391 MoaE protein Aaci_1759 PF02597 ThiS family Aaci_1760 PF00704 Glycosyl hydrolases family 18 Aaci_1761 PF03773 Aaci_1761 Aaci_1763 PF01863 Protein of unknown function DUF45 Aaci_1764 PF01546 Peptidase family M20/M25/M40 Aaci_1764 PF07687 Peptidase dimerisation domain Aaci_1765 PF06778 Chlorite dismutase Aaci_1767 PF00072 Response regulator receiver domain Aaci_1767 PF08769 Sporulation initiation factor Spo0A C terminal Aaci_1768 PF05580 Aaci_1768 Aaci_1769 PF02463 RecF/RecN/SMC N terminal domain Aaci_1770 PF01513 ATP-NAD kinase Aaci_1772 PF01479 S4 domain Aaci_1772 PF01728 FtsJ-like methyltransferase Aaci_1774 PF00348 Polyprenyl synthetase Aaci_1775 PF02609 Exonuclease VII small subunit Aaci_1776 PF02601 Aaci_1776 Aaci_1776 PF13742 Aaci_1776 Aaci_1777 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Aaci_1777 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Aaci_1778 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_1779 PF00814 Glycoprotease family Aaci_1780 PF01029 NusB family Aaci_1781 PF10031 Aaci_1781 Aaci_1783 PF03780 Aaci_1783 Aaci_1784 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Aaci_1784 PF02785 Biotin carboxylase C-terminal domain Aaci_1784 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Aaci_1785 PF00364 Biotin-requiring enzyme Aaci_1786 PF12685 SpoIIIAH-like protein Aaci_1788 PF09581 Aaci_1788 Aaci_1789 PF09546 Aaci_1789 Aaci_1790 PF06686 Aaci_1790 Aaci_1791 PF06686 Aaci_1791 Aaci_1792 PF09548 Aaci_1792 Aaci_1795 PF01132 Elongation factor P (EF-P) OB domain Aaci_1795 PF08207 Elongation factor P (EF-P) KOW-like domain Aaci_1795 PF09285 Elongation factor P, C-terminal Aaci_1796 PF01220 Dehydroquinase class II Aaci_1797 PF00300 Histidine phosphatase superfamily (branch 1) Aaci_1798 PF00266 Aminotransferase class-V Aaci_1799 PF02347 Glycine cleavage system P-protein Aaci_1800 PF01571 Aminomethyltransferase folate-binding domain Aaci_1800 PF08669 Glycine cleavage T-protein C-terminal barrel domain Aaci_1801 PF00176 SNF2 family N-terminal domain Aaci_1801 PF00271 Helicase conserved C-terminal domain Aaci_1802 PF11079 Aaci_1802 Aaci_1803 PF01695 IstB-like ATP binding protein Aaci_1804 PF01202 Shikimate kinase Aaci_1808 PF07963 Prokaryotic N-terminal methylation motif Aaci_1809 PF07963 Prokaryotic N-terminal methylation motif Aaci_1810 PF00482 Type II secretion system (T2SS), protein F Aaci_1811 PF00437 Type II/IV secretion system protein Aaci_1812 PF14464 Prokaryotic homologs of the JAB domain Aaci_1813 PF01018 GTP1/OBG Aaci_1813 PF01926 50S ribosome-binding GTPase Aaci_1813 PF09269 Domain of unknown function (DUF1967) Aaci_1814 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Aaci_1815 PF01016 Ribosomal L27 protein Aaci_1816 PF04327 Protein of unknown function (DUF464) Aaci_1817 PF00829 Ribosomal prokaryotic L21 protein Aaci_1818 PF02163 Peptidase family M50 Aaci_1819 PF01551 Peptidase family M23 Aaci_1820 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Aaci_1821 PF03775 Septum formation inhibitor MinC, C-terminal domain Aaci_1822 PF04093 Aaci_1822 Aaci_1823 PF04085 rod shape-determining protein MreC Aaci_1824 PF06723 MreB/Mbl protein Aaci_1825 PF04002 RadC-like JAB domain Aaci_1827 PF04185 Phosphoesterase family Aaci_1828 PF03990 Aaci_1828 Aaci_1828 PF06725 3D domain Aaci_1828 PF07501 G5 domain Aaci_1829 PF01225 Mur ligase family, catalytic domain Aaci_1829 PF02875 Mur ligase family, glutamate ligase domain Aaci_1829 PF08245 Mur ligase middle domain Aaci_1830 PF08245 Mur ligase middle domain Aaci_1831 PF00133 tRNA synthetases class I (I, L, M and V) Aaci_1831 PF08264 Anticodon-binding domain of tRNA Aaci_1831 PF10458 Valyl tRNA synthetase tRNA binding arm Aaci_1835 PF00202 Aminotransferase class-III Aaci_1836 PF00490 Delta-aminolevulinic acid dehydratase Aaci_1837 PF02602 Uroporphyrinogen-III synthase HemD Aaci_1838 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Aaci_1838 PF03900 Porphobilinogen deaminase, C-terminal domain Aaci_1839 PF01578 Aaci_1839 Aaci_1840 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Aaci_1840 PF01488 Shikimate / quinate 5-dehydrogenase Aaci_1840 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Aaci_1841 PF01926 50S ribosome-binding GTPase Aaci_1842 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_1842 PF02190 ATP-dependent protease La (LON) domain Aaci_1842 PF05362 Lon protease (S16) C-terminal proteolytic domain Aaci_1843 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_1843 PF05362 Lon protease (S16) C-terminal proteolytic domain Aaci_1844 PF06689 ClpX C4-type zinc finger Aaci_1844 PF07724 AAA domain (Cdc48 subfamily) Aaci_1844 PF10431 C-terminal, D2-small domain, of ClpB protein Aaci_1845 PF00574 Clp protease Aaci_1846 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Aaci_1846 PF05697 Bacterial trigger factor protein (TF) Aaci_1846 PF05698 Bacterial trigger factor protein (TF) C-terminus Aaci_1847 PF01725 Ham1 family Aaci_1848 PF01177 Asp/Glu/Hydantoin racemase Aaci_1849 PF01047 MarR family Aaci_1850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_1850 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_1850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_1851 PF02515 CoA-transferase family III Aaci_1853 PF01184 Aaci_1853 Aaci_1854 PF00196 Bacterial regulatory proteins, luxR family Aaci_1855 PF00155 Aminotransferase class I and II Aaci_1856 PF04055 Radical SAM superfamily Aaci_1857 PF00392 Bacterial regulatory proteins, gntR family Aaci_1857 PF07702 UTRA domain Aaci_1858 PF07690 Major Facilitator Superfamily Aaci_1859 PF00581 Rhodanese-like domain Aaci_1859 PF12368 Aaci_1859 Aaci_1861 PF13085 2Fe-2S iron-sulfur cluster binding domain Aaci_1861 PF13183 4Fe-4S dicluster domain Aaci_1862 PF00890 FAD binding domain Aaci_1862 PF02910 Fumarate reductase flavoprotein C-term Aaci_1863 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Aaci_1864 PF01541 GIY-YIG catalytic domain Aaci_1864 PF02151 UvrB/uvrC motif Aaci_1864 PF08459 UvrC Helix-hairpin-helix N-terminal Aaci_1864 PF14520 Helix-hairpin-helix domain Aaci_1866 PF00749 tRNA synthetases class I (E and Q), catalytic domain Aaci_1868 PF00155 Aminotransferase class I and II Aaci_1869 PF04367 Aaci_1869 Aaci_1870 PF01699 Sodium/calcium exchanger protein Aaci_1873 PF01904 Protein of unknown function DUF72 Aaci_1875 PF03816 Cell envelope-related transcriptional attenuator domain Aaci_1876 PF00535 Glycosyl transferase family 2 Aaci_1876 PF04138 Aaci_1876 Aaci_1877 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Aaci_1877 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Aaci_1878 PF12802 MarR family Aaci_1879 PF09335 Aaci_1879 Aaci_1881 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Aaci_1882 PF13091 PLD-like domain Aaci_1882 PF13396 Aaci_1882 Aaci_1884 PF00893 Small Multidrug Resistance protein Aaci_1885 PF01545 Cation efflux family Aaci_1885 PF16916 Aaci_1885 Aaci_1886 PF02867 Ribonucleotide reductase, barrel domain Aaci_1887 PF03477 ATP cone domain Aaci_1888 PF13242 HAD-hyrolase-like Aaci_1888 PF13344 Haloacid dehalogenase-like hydrolase Aaci_1889 PF00753 Metallo-beta-lactamase superfamily Aaci_1890 PF13231 Aaci_1890 Aaci_1891 PF00535 Glycosyl transferase family 2 Aaci_1892 PF00892 EamA-like transporter family Aaci_1893 PF01678 Diaminopimelate epimerase Aaci_1895 PF00232 Glycosyl hydrolase family 1 Aaci_1896 PF00005 ABC transporter Aaci_1896 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aaci_1897 PF00005 ABC transporter Aaci_1897 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aaci_1898 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_1898 PF12911 Aaci_1898 Aaci_1899 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_1900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_1902 PF00037 4Fe-4S binding domain Aaci_1902 PF12800 4Fe-4S binding domain Aaci_1903 PF01381 Helix-turn-helix Aaci_1904 PF00872 Aaci_1904 Aaci_1905 PF00005 ABC transporter Aaci_1906 PF01895 PhoU domain Aaci_1908 PF00877 NlpC/P60 family Aaci_1908 PF01476 LysM domain Aaci_1909 PF01613 Flavin reductase like domain Aaci_1910 PF04101 Glycosyltransferase family 28 C-terminal domain Aaci_1910 PF06925 Aaci_1910 Aaci_1912 PF01522 Polysaccharide deacetylase Aaci_1913 PF04101 Glycosyltransferase family 28 C-terminal domain Aaci_1913 PF06925 Aaci_1913 Aaci_1914 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_1915 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_1916 PF12849 PBP superfamily domain Aaci_1917 PF00561 alpha/beta hydrolase fold Aaci_1918 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Aaci_1918 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Aaci_1918 PF16582 Aaci_1918 Aaci_1919 PF00425 chorismate binding enzyme Aaci_1920 PF00501 AMP-binding enzyme Aaci_1920 PF13193 AMP-binding enzyme C-terminal domain Aaci_1921 PF00378 Enoyl-CoA hydratase/isomerase family Aaci_1922 PF01040 UbiA prenyltransferase family Aaci_1923 PF02634 FdhD/NarQ family Aaci_1924 PF07849 Aaci_1924 Aaci_1925 PF00384 Molybdopterin oxidoreductase Aaci_1925 PF01568 Molydopterin dinucleotide binding domain Aaci_1925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Aaci_1925 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Aaci_1925 PF12838 4Fe-4S dicluster domain Aaci_1925 PF13510 2Fe-2S iron-sulfur cluster binding domain Aaci_1926 PF03190 Protein of unknown function, DUF255 Aaci_1927 PF03190 Protein of unknown function, DUF255 Aaci_1928 PF00583 Acetyltransferase (GNAT) family Aaci_1929 PF00892 EamA-like transporter family Aaci_1930 PF01784 NIF3 (NGG1p interacting factor 3) Aaci_1931 PF03070 TENA/THI-4/PQQC family Aaci_1932 PF08543 Phosphomethylpyrimidine kinase Aaci_1933 PF02110 Hydroxyethylthiazole kinase family Aaci_1934 PF02581 Thiamine monophosphate synthase/TENI Aaci_1935 PF00005 ABC transporter Aaci_1936 PF00005 ABC transporter Aaci_1936 PF00664 ABC transporter transmembrane region Aaci_1937 PF02322 Aaci_1937 Aaci_1938 PF01654 Aaci_1938 Aaci_1939 PF07690 Major Facilitator Superfamily Aaci_1940 PF01047 MarR family Aaci_1941 PF01987 Mitochondrial biogenesis AIM24 Aaci_1942 PF00005 ABC transporter Aaci_1943 PF01032 FecCD transport family Aaci_1944 PF01497 Periplasmic binding protein Aaci_1946 PF01923 Cobalamin adenosyltransferase Aaci_1947 PF02277 Phosphoribosyltransferase Aaci_1948 PF01638 HxlR-like helix-turn-helix Aaci_1949 PF01242 6-pyruvoyl tetrahydropterin synthase Aaci_1950 PF04055 Radical SAM superfamily Aaci_1950 PF13394 4Fe-4S single cluster domain Aaci_1951 PF13419 Haloacid dehalogenase-like hydrolase Aaci_1952 PF00269 Small, acid-soluble spore proteins, alpha/beta type Aaci_1953 PF02541 Ppx/GppA phosphatase family Aaci_1954 PF01790 Aaci_1954 Aaci_1955 PF09388 Spo0E like sporulation regulatory protein Aaci_1956 PF04204 Homoserine O-succinyltransferase Aaci_1958 PF01384 Aaci_1958 Aaci_1959 PF02261 Aspartate decarboxylase Aaci_1960 PF13472 GDSL-like Lipase/Acylhydrolase family Aaci_1961 PF00403 Heavy-metal-associated domain Aaci_1962 PF03323 Aaci_1962 Aaci_1963 PF05504 Spore germination B3/ GerAC like, C-terminal Aaci_1964 PF03845 Aaci_1964 Aaci_1965 PF06935 Aaci_1965 Aaci_1966 PF00512 His Kinase A (phospho-acceptor) domain Aaci_1966 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_1966 PF08447 PAS fold Aaci_1968 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Aaci_1969 PF00512 His Kinase A (phospho-acceptor) domain Aaci_1969 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_1970 PF00072 Response regulator receiver domain Aaci_1970 PF00486 Transcriptional regulatory protein, C terminal Aaci_1971 PF09990 Aaci_1971 Aaci_1972 PF13673 Acetyltransferase (GNAT) domain Aaci_1973 PF00491 Arginase family Aaci_1974 PF01784 NIF3 (NGG1p interacting factor 3) Aaci_1975 PF12847 Methyltransferase domain Aaci_1976 PF02698 DUF218 domain Aaci_1977 PF00140 Sigma-70 factor, region 1 Aaci_1977 PF03979 Sigma-70 factor, region 1 Aaci_1977 PF04539 Sigma-70 region 3 Aaci_1977 PF04542 Sigma-70 region 2 Aaci_1977 PF04545 Sigma-70, region 4 Aaci_1978 PF01807 CHC2 zinc finger Aaci_1978 PF08275 DNA primase catalytic core, N-terminal domain Aaci_1978 PF10410 DnaB-helicase binding domain of primase Aaci_1978 PF13155 Toprim-like Aaci_1979 PF02565 Recombination protein O C terminal Aaci_1979 PF11967 Recombination protein O N terminal Aaci_1980 PF14006 Aaci_1980 Aaci_1981 PF01926 50S ribosome-binding GTPase Aaci_1981 PF07650 KH domain Aaci_1982 PF01219 Prokaryotic diacylglycerol kinase Aaci_1983 PF02130 Uncharacterized protein family UPF0054 Aaci_1984 PF01966 HD domain Aaci_1984 PF07697 Aaci_1984 Aaci_1984 PF07698 Aaci_1984 Aaci_1985 PF02562 PhoH-like protein Aaci_1986 PF06898 Aaci_1986 Aaci_1987 PF07873 YabP family Aaci_1988 PF09424 Yqey-like protein Aaci_1989 PF01165 Ribosomal protein S21 Aaci_1990 PF02690 Aaci_1990 Aaci_1991 PF00293 NUDIX domain Aaci_1991 PF01791 DeoC/LacD family aldolase Aaci_1992 PF00919 Uncharacterized protein family UPF0004 Aaci_1992 PF04055 Radical SAM superfamily Aaci_1993 PF04452 RNA methyltransferase Aaci_1994 PF06325 Ribosomal protein L11 methyltransferase (PrmA) Aaci_1995 PF00226 DnaJ domain Aaci_1995 PF00684 DnaJ central domain Aaci_1995 PF01556 DnaJ C terminal domain Aaci_1996 PF00012 Hsp70 protein Aaci_1997 PF01025 GrpE Aaci_1998 PF01628 HrcA protein C terminal domain Aaci_1998 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Aaci_1999 PF04055 Radical SAM superfamily Aaci_1999 PF06969 HemN C-terminal domain Aaci_2000 PF00009 Elongation factor Tu GTP binding domain Aaci_2000 PF00679 Elongation factor G C-terminus Aaci_2000 PF03144 Elongation factor Tu domain 2 Aaci_2000 PF06421 GTP-binding protein LepA C-terminus Aaci_2001 PF01545 Cation efflux family Aaci_2003 PF01464 Transglycosylase SLT domain Aaci_2004 PF03418 Germination protease Aaci_2005 PF01649 Ribosomal protein S20 Aaci_2006 PF00269 Small, acid-soluble spore proteins, alpha/beta type Aaci_2007 PF06144 DNA polymerase III, delta subunit Aaci_2008 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_2009 PF03772 Aaci_2009 Aaci_2010 PF10531 SLBB domain Aaci_2010 PF12836 Helix-hairpin-helix motif Aaci_2011 PF01325 Iron dependent repressor, N-terminal DNA binding domain Aaci_2011 PF02742 Iron dependent repressor, metal binding and dimerisation domain Aaci_2012 PF13649 Methyltransferase domain Aaci_2013 PF02410 Oligomerisation domain Aaci_2014 PF01966 HD domain Aaci_2015 PF01467 Cytidylyltransferase Aaci_2016 PF02423 Ornithine cyclodeaminase/mu-crystallin family Aaci_2016 PF08501 Shikimate dehydrogenase substrate binding domain Aaci_2017 PF01926 50S ribosome-binding GTPase Aaci_2018 PF13242 HAD-hyrolase-like Aaci_2020 PF04542 Sigma-70 region 2 Aaci_2020 PF04545 Sigma-70, region 4 Aaci_2021 PF01209 ubiE/COQ5 methyltransferase family Aaci_2023 PF02618 YceG-like family Aaci_2024 PF03652 Uncharacterised protein family (UPF0081) Aaci_2025 PF06135 Aaci_2025 Aaci_2026 PF01411 tRNA synthetases class II (A) Aaci_2026 PF02272 DHHA1 domain Aaci_2026 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Aaci_2027 PF01594 Aaci_2027 Aaci_2029 PF00266 Aminotransferase class-V Aaci_2030 PF02082 Transcriptional regulator Aaci_2031 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_2031 PF12002 MgsA AAA+ ATPase C terminal Aaci_2031 PF16193 Aaci_2031 Aaci_2033 PF01451 Low molecular weight phosphotyrosine protein phosphatase Aaci_2034 PF01609 Transposase DDE domain Aaci_2034 PF14104 Aaci_2034 Aaci_2035 PF00501 AMP-binding enzyme Aaci_2035 PF13193 AMP-binding enzyme C-terminal domain Aaci_2037 PF00152 tRNA synthetases class II (D, K and N) Aaci_2037 PF01336 OB-fold nucleic acid binding domain Aaci_2037 PF02938 GAD domain Aaci_2038 PF03129 Anticodon binding domain Aaci_2038 PF13393 Histidyl-tRNA synthetase Aaci_2040 PF00202 Aminotransferase class-III Aaci_2041 PF01699 Sodium/calcium exchanger protein Aaci_2042 PF12679 Aaci_2042 Aaci_2043 PF00005 ABC transporter Aaci_2045 PF07690 Major Facilitator Superfamily Aaci_2046 PF12706 Beta-lactamase superfamily domain Aaci_2047 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2048 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2049 PF13416 Bacterial extracellular solute-binding protein Aaci_2050 PF00355 Rieske [2Fe-2S] domain Aaci_2051 PF00378 Enoyl-CoA hydratase/isomerase family Aaci_2052 PF01039 Carboxyl transferase domain Aaci_2053 PF00682 HMGL-like Aaci_2054 PF00364 Biotin-requiring enzyme Aaci_2056 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_2056 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_2056 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_2058 PF00108 Thiolase, N-terminal domain Aaci_2058 PF02803 Thiolase, C-terminal domain Aaci_2059 PF01144 Coenzyme A transferase Aaci_2060 PF01144 Coenzyme A transferase Aaci_2062 PF14398 Aaci_2062 Aaci_2063 PF14489 QueF-like protein Aaci_2064 PF01189 NOL1/NOP2/sun family Aaci_2064 PF13636 pre-rRNA processing and ribosome biogenesis Aaci_2064 PF17125 Aaci_2064 Aaci_2065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Aaci_2065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Aaci_2067 PF00106 short chain dehydrogenase Aaci_2069 PF13347 MFS/sugar transport protein Aaci_2070 PF02585 GlcNAc-PI de-N-acetylase Aaci_2071 PF00248 Aldo/keto reductase family Aaci_2072 PF00994 Probable molybdopterin binding domain Aaci_2072 PF03453 MoeA N-terminal region (domain I and II) Aaci_2073 PF00483 Nucleotidyl transferase Aaci_2074 PF00877 NlpC/P60 family Aaci_2074 PF01476 LysM domain Aaci_2076 PF00580 UvrD/REP helicase N-terminal domain Aaci_2076 PF12705 PD-(D/E)XK nuclease superfamily Aaci_2076 PF13361 UvrD-like helicase C-terminal domain Aaci_2077 PF12705 PD-(D/E)XK nuclease superfamily Aaci_2078 PF07690 Major Facilitator Superfamily Aaci_2079 PF00795 Carbon-nitrogen hydrolase Aaci_2080 PF00324 Amino acid permease Aaci_2081 PF00202 Aminotransferase class-III Aaci_2082 PF00158 Sigma-54 interaction domain Aaci_2082 PF13426 PAS domain Aaci_2083 PF01207 Dihydrouridine synthase (Dus) Aaci_2084 PF05154 Aaci_2084 Aaci_2085 PF00768 D-alanyl-D-alanine carboxypeptidase Aaci_2086 PF01325 Iron dependent repressor, N-terminal DNA binding domain Aaci_2086 PF02742 Iron dependent repressor, metal binding and dimerisation domain Aaci_2086 PF04023 FeoA domain Aaci_2087 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aaci_2088 PF06491 Disulphide isomerase Aaci_2089 PF01208 Uroporphyrinogen decarboxylase (URO-D) Aaci_2090 PF00762 Ferrochelatase Aaci_2091 PF01593 Flavin containing amine oxidoreductase Aaci_2093 PF01925 Aaci_2093 Aaci_2094 PF00563 EAL domain Aaci_2094 PF00990 GGDEF domain Aaci_2094 PF01590 GAF domain Aaci_2096 PF02580 D-Tyr-tRNA(Tyr) deacylase Aaci_2097 PF02824 TGS domain Aaci_2097 PF04607 Region found in RelA / SpoT proteins Aaci_2097 PF13291 ACT domain Aaci_2097 PF13328 HD domain Aaci_2098 PF00156 Phosphoribosyl transferase domain Aaci_2099 PF01368 DHH family Aaci_2099 PF02272 DHHA1 domain Aaci_2100 PF01545 Cation efflux family Aaci_2100 PF16916 Aaci_2100 Aaci_2101 PF02355 Protein export membrane protein Aaci_2102 PF02355 Protein export membrane protein Aaci_2103 PF13797 Aaci_2103 Aaci_2104 PF01943 Aaci_2104 Aaci_2104 PF14667 Polysaccharide biosynthesis C-terminal domain Aaci_2106 PF00990 GGDEF domain Aaci_2106 PF13185 GAF domain Aaci_2107 PF12670 Aaci_2107 Aaci_2108 PF02699 Preprotein translocase subunit Aaci_2109 PF01702 Queuine tRNA-ribosyltransferase Aaci_2110 PF02547 Queuosine biosynthesis protein Aaci_2111 PF12791 Aaci_2111 Aaci_2112 PF04542 Sigma-70 region 2 Aaci_2113 PF05491 Holliday junction DNA helicase ruvB C-terminus Aaci_2113 PF05496 Holliday junction DNA helicase ruvB N-terminus Aaci_2114 PF01330 RuvA N terminal domain Aaci_2114 PF07499 RuvA, C-terminal domain Aaci_2114 PF14520 Helix-hairpin-helix domain Aaci_2115 PF02075 Crossover junction endodeoxyribonuclease RuvC Aaci_2117 PF01709 Transcriptional regulator Aaci_2118 PF02540 NAD synthase Aaci_2119 PF00795 Carbon-nitrogen hydrolase Aaci_2120 PF01636 Phosphotransferase enzyme family Aaci_2121 PF01476 LysM domain Aaci_2122 PF09560 Aaci_2122 Aaci_2123 PF00579 tRNA synthetases class I (W and Y) Aaci_2123 PF01479 S4 domain Aaci_2124 PF00905 Penicillin binding protein transpeptidase domain Aaci_2124 PF00912 Transglycosylase Aaci_2125 PF00488 MutS domain V Aaci_2125 PF01713 Smr domain Aaci_2126 PF04020 Aaci_2126 Aaci_2127 PF02674 Aaci_2127 Aaci_2128 PF05164 Cell division protein ZapA Aaci_2129 PF01588 Putative tRNA binding domain Aaci_2129 PF03147 Ferredoxin-fold anticodon binding domain Aaci_2129 PF03483 B3/4 domain Aaci_2129 PF03484 tRNA synthetase B5 domain Aaci_2130 PF01409 tRNA synthetases class II core domain (F) Aaci_2130 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Aaci_2132 PF02222 ATP-grasp domain Aaci_2133 PF00731 AIR carboxylase Aaci_2134 PF01791 DeoC/LacD family aldolase Aaci_2135 PF00365 Phosphofructokinase Aaci_2136 PF00311 Phosphoenolpyruvate carboxylase Aaci_2137 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aaci_2137 PF00672 HAMP domain Aaci_2137 PF12729 Aaci_2137 Aaci_2138 PF00381 PTS HPr component phosphorylation site Aaci_2139 PF00005 ABC transporter Aaci_2139 PF03459 TOBE domain Aaci_2140 PF13556 PucR C-terminal helix-turn-helix domain Aaci_2141 PF00390 Malic enzyme, N-terminal domain Aaci_2141 PF03949 Malic enzyme, NAD binding domain Aaci_2142 PF06039 Aaci_2142 Aaci_2143 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Aaci_2143 PF00364 Biotin-requiring enzyme Aaci_2144 PF00676 Dehydrogenase E1 component Aaci_2144 PF02779 Transketolase, pyrimidine binding domain Aaci_2144 PF16078 Aaci_2144 Aaci_2144 PF16870 Aaci_2144 Aaci_2146 PF07726 ATPase family associated with various cellular activities (AAA) Aaci_2147 PF01882 Aaci_2147 Aaci_2149 PF01238 Phosphomannose isomerase type I Aaci_2150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Aaci_2150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Aaci_2151 PF13490 Putative zinc-finger Aaci_2152 PF00892 EamA-like transporter family Aaci_2153 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Aaci_2153 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Aaci_2154 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Aaci_2154 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Aaci_2155 PF01261 Xylose isomerase-like TIM barrel Aaci_2155 PF07582 AP endonuclease family 2 C terminus Aaci_2156 PF01261 Xylose isomerase-like TIM barrel Aaci_2157 PF01261 Xylose isomerase-like TIM barrel Aaci_2160 PF00588 SpoU rRNA Methylase family Aaci_2161 PF13536 Multidrug resistance efflux transporter Aaci_2162 PF00583 Acetyltransferase (GNAT) family Aaci_2163 PF00561 alpha/beta hydrolase fold Aaci_2164 PF00324 Amino acid permease Aaci_2165 PF05067 Manganese containing catalase Aaci_2166 PF12652 Aaci_2166 Aaci_2167 PF11007 Aaci_2167 Aaci_2168 PF02681 Aaci_2168 Aaci_2169 PF00588 SpoU rRNA Methylase family Aaci_2170 PF00453 Ribosomal protein L20 Aaci_2171 PF01632 Ribosomal protein L35 Aaci_2172 PF00707 Translation initiation factor IF-3, C-terminal domain Aaci_2172 PF05198 Translation initiation factor IF-3, N-terminal domain Aaci_2173 PF04143 Aaci_2173 Aaci_2174 PF08241 Methyltransferase domain Aaci_2175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Aaci_2175 PF02824 TGS domain Aaci_2175 PF03129 Anticodon binding domain Aaci_2175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Aaci_2176 PF08812 Aaci_2176 Aaci_2177 PF01432 Peptidase family M3 Aaci_2177 PF08439 Oligopeptidase F Aaci_2178 PF01263 Aldose 1-epimerase Aaci_2179 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Aaci_2179 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Aaci_2180 PF01261 Xylose isomerase-like TIM barrel Aaci_2181 PF00083 Sugar (and other) transporter Aaci_2182 PF00149 Calcineurin-like phosphoesterase Aaci_2183 PF14518 Iron-containing redox enzyme Aaci_2184 PF13279 Thioesterase-like superfamily Aaci_2186 PF00106 short chain dehydrogenase Aaci_2188 PF00860 Permease family Aaci_2190 PF01566 Aaci_2190 Aaci_2191 PF01566 Aaci_2191 Aaci_2192 PF01381 Helix-turn-helix Aaci_2192 PF06803 Aaci_2192 Aaci_2194 PF06210 Aaci_2194 Aaci_2195 PF02517 CAAX protease self-immunity Aaci_2195 PF04229 GrpB protein Aaci_2196 PF07561 Aaci_2196 Aaci_2197 PF00313 'Cold-shock' DNA-binding domain Aaci_2200 PF00248 Aldo/keto reductase family Aaci_2201 PF02040 Aaci_2201 Aaci_2202 PF06283 Trehalose utilisation Aaci_2204 PF00474 Sodium:solute symporter family Aaci_2205 PF00248 Aldo/keto reductase family Aaci_2206 PF01261 Xylose isomerase-like TIM barrel Aaci_2208 PF01329 Pterin 4 alpha carbinolamine dehydratase Aaci_2209 PF00293 NUDIX domain Aaci_2211 PF02675 S-adenosylmethionine decarboxylase Aaci_2212 PF01694 Rhomboid family Aaci_2213 PF00534 Glycosyl transferases group 1 Aaci_2213 PF13439 Glycosyltransferase Family 4 Aaci_2215 PF02687 Aaci_2215 Aaci_2215 PF12704 MacB-like periplasmic core domain Aaci_2216 PF00005 ABC transporter Aaci_2217 PF00529 HlyD family secretion protein Aaci_2217 PF16576 Aaci_2217 Aaci_2219 PF00571 CBS domain Aaci_2220 PF00269 Small, acid-soluble spore proteins, alpha/beta type Aaci_2221 PF00285 Citrate synthase Aaci_2222 PF02659 Aaci_2222 Aaci_2223 PF08245 Mur ligase middle domain Aaci_2224 PF00694 Aconitase C-terminal domain Aaci_2225 PF00330 Aconitase family (aconitate hydratase) Aaci_2226 PF00180 Isocitrate/isopropylmalate dehydrogenase Aaci_2227 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Aaci_2227 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain Aaci_2228 PF01842 ACT domain Aaci_2228 PF10369 Small subunit of acetolactate synthase Aaci_2229 PF00205 Thiamine pyrophosphate enzyme, central domain Aaci_2229 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Aaci_2229 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Aaci_2230 PF00920 Dehydratase family Aaci_2232 PF01063 Aminotransferase class IV Aaci_2233 PF00742 Homoserine dehydrogenase Aaci_2233 PF01842 ACT domain Aaci_2233 PF03447 Homoserine dehydrogenase, NAD binding domain Aaci_2234 PF00294 pfkB family carbohydrate kinase Aaci_2235 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2236 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2237 PF01547 Bacterial extracellular solute-binding protein Aaci_2238 PF00356 Bacterial regulatory proteins, lacI family Aaci_2238 PF13377 Periplasmic binding protein-like domain Aaci_2239 PF01381 Helix-turn-helix Aaci_2239 PF12727 PBP superfamily domain Aaci_2240 PF13531 Bacterial extracellular solute-binding protein Aaci_2241 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2242 PF00578 AhpC/TSA family Aaci_2242 PF10417 C-terminal domain of 1-Cys peroxiredoxin Aaci_2243 PF02082 Transcriptional regulator Aaci_2244 PF08349 Aaci_2244 Aaci_2245 PF00704 Glycosyl hydrolases family 18 Aaci_2245 PF01476 LysM domain Aaci_2247 PF00324 Amino acid permease Aaci_2250 PF08486 Aaci_2250 Aaci_2254 PF00005 ABC transporter Aaci_2254 PF00664 ABC transporter transmembrane region Aaci_2255 PF00005 ABC transporter Aaci_2255 PF00664 ABC transporter transmembrane region Aaci_2256 PF03553 Aaci_2256 Aaci_2258 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_2259 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2260 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2260 PF12911 Aaci_2260 Aaci_2261 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_2262 PF00005 ABC transporter Aaci_2262 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aaci_2263 PF00005 ABC transporter Aaci_2263 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aaci_2264 PF00072 Response regulator receiver domain Aaci_2264 PF00486 Transcriptional regulatory protein, C terminal Aaci_2265 PF00512 His Kinase A (phospho-acceptor) domain Aaci_2265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_2266 PF03099 Biotin/lipoate A/B protein ligase family Aaci_2267 PF00512 His Kinase A (phospho-acceptor) domain Aaci_2267 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_2268 PF00072 Response regulator receiver domain Aaci_2268 PF00486 Transcriptional regulatory protein, C terminal Aaci_2269 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aaci_2269 PF03466 LysR substrate binding domain Aaci_2270 PF00709 Adenylosuccinate synthetase Aaci_2271 PF03372 Endonuclease/Exonuclease/phosphatase family Aaci_2272 PF03572 Peptidase family S41 Aaci_2273 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Aaci_2273 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Aaci_2274 PF04198 Putative sugar-binding domain Aaci_2275 PF00485 Phosphoribulokinase / Uridine kinase family Aaci_2276 PF00294 pfkB family carbohydrate kinase Aaci_2277 PF13407 Periplasmic binding protein domain Aaci_2278 PF02653 Aaci_2278 Aaci_2279 PF00005 ABC transporter Aaci_2280 PF05025 RbsD / FucU transport protein family Aaci_2281 PF00356 Bacterial regulatory proteins, lacI family Aaci_2281 PF13377 Periplasmic binding protein-like domain Aaci_2282 PF00005 ABC transporter Aaci_2282 PF00664 ABC transporter transmembrane region Aaci_2283 PF00005 ABC transporter Aaci_2283 PF00664 ABC transporter transmembrane region Aaci_2284 PF12833 Helix-turn-helix domain Aaci_2284 PF14525 Aaci_2284 Aaci_2286 PF01641 SelR domain Aaci_2287 PF02698 DUF218 domain Aaci_2288 PF00459 Inositol monophosphatase family Aaci_2289 PF03786 D-mannonate dehydratase (UxuA) Aaci_2290 PF01081 KDPG and KHG aldolase Aaci_2291 PF00294 pfkB family carbohydrate kinase Aaci_2292 PF02595 Glycerate kinase family Aaci_2293 PF03787 RAMP superfamily Aaci_2294 PF09701 CRISPR-associated protein (Cas_Cmr5) Aaci_2295 PF03787 RAMP superfamily Aaci_2296 PF09700 CRISPR-associated protein (Cas_Cmr3) Aaci_2297 PF12469 CRISPR-associated protein Aaci_2298 PF03787 RAMP superfamily Aaci_2299 PF09455 CRISPR-associated (Cas) DxTHG family Aaci_2300 PF09651 CRISPR-associated protein (Cas_APE2256) Aaci_2302 PF07690 Major Facilitator Superfamily Aaci_2303 PF01936 NYN domain Aaci_2304 PF00480 ROK family Aaci_2305 PF00672 HAMP domain Aaci_2306 PF01547 Bacterial extracellular solute-binding protein Aaci_2307 PF00795 Carbon-nitrogen hydrolase Aaci_2309 PF03069 Acetamidase/Formamidase family Aaci_2313 PF01609 Transposase DDE domain Aaci_2313 PF05598 Aaci_2313 Aaci_2316 PF02503 Polyphosphate kinase middle domain Aaci_2316 PF13089 Polyphosphate kinase N-terminal domain Aaci_2316 PF13090 Polyphosphate kinase C-terminal domain Aaci_2318 PF13421 Aaci_2318 Aaci_2319 PF07690 Major Facilitator Superfamily Aaci_2322 PF07875 Aaci_2322 Aaci_2323 PF00455 Aaci_2323 Aaci_2323 PF08220 DeoR-like helix-turn-helix domain Aaci_2324 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Aaci_2324 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Aaci_2325 PF00288 GHMP kinases N terminal domain Aaci_2325 PF08544 GHMP kinases C terminal Aaci_2325 PF10509 Galactokinase galactose-binding signature Aaci_2326 PF14542 GCN5-related N-acetyl-transferase Aaci_2328 PF00331 Glycosyl hydrolase family 10 Aaci_2329 PF01988 Aaci_2329 Aaci_2330 PF00107 Zinc-binding dehydrogenase Aaci_2330 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_2331 PF00924 Mechanosensitive ion channel Aaci_2332 PF00905 Penicillin binding protein transpeptidase domain Aaci_2332 PF03717 Penicillin-binding Protein dimerisation domain Aaci_2333 PF04932 Aaci_2333 Aaci_2334 PF13641 Glycosyltransferase like family 2 Aaci_2335 PF07077 Aaci_2335 Aaci_2338 PF02898 Nitric oxide synthase, oxygenase domain Aaci_2339 PF01145 SPFH domain / Band 7 family Aaci_2341 PF02829 3H domain Aaci_2341 PF08279 HTH domain Aaci_2342 PF01464 Transglycosylase SLT domain Aaci_2343 PF01121 Dephospho-CoA kinase Aaci_2344 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Aaci_2344 PF06827 Zinc finger found in FPG and IleRS Aaci_2344 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Aaci_2345 PF00476 DNA polymerase family A Aaci_2345 PF01367 5'-3' exonuclease, C-terminal SAM fold Aaci_2345 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Aaci_2346 PF01817 Chorismate mutase type II Aaci_2347 PF00056 lactate/malate dehydrogenase, NAD binding domain Aaci_2347 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Aaci_2348 PF00180 Isocitrate/isopropylmalate dehydrogenase Aaci_2349 PF00512 His Kinase A (phospho-acceptor) domain Aaci_2350 PF00072 Response regulator receiver domain Aaci_2350 PF00486 Transcriptional regulatory protein, C terminal Aaci_2351 PF00579 tRNA synthetases class I (W and Y) Aaci_2352 PF00224 Pyruvate kinase, barrel domain Aaci_2352 PF02887 Pyruvate kinase, alpha/beta domain Aaci_2353 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Aaci_2354 PF01039 Carboxyl transferase domain Aaci_2356 PF02811 PHP domain Aaci_2356 PF07733 Bacterial DNA polymerase III alpha subunit Aaci_2356 PF14579 Helix-hairpin-helix motif Aaci_2357 PF00571 CBS domain Aaci_2357 PF03061 Thioesterase superfamily Aaci_2357 PF07085 DRTGG domain Aaci_2357 PF13412 Winged helix-turn-helix DNA-binding Aaci_2358 PF02588 Aaci_2358 Aaci_2358 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Aaci_2362 PF00291 Pyridoxal-phosphate dependent enzyme Aaci_2363 PF01316 Arginine repressor, DNA binding domain Aaci_2363 PF02863 Arginine repressor, C-terminal domain Aaci_2364 PF00817 impB/mucB/samB family Aaci_2364 PF11798 IMS family HHH motif Aaci_2364 PF11799 impB/mucB/samB family C-terminal domain Aaci_2367 PF11588 Protein of unknown function (DUF3243) Aaci_2368 PF13483 Beta-lactamase superfamily domain Aaci_2369 PF06133 Protein of unknown function (DUF964) Aaci_2370 PF01152 Bacterial-like globin Aaci_2371 PF01381 Helix-turn-helix Aaci_2372 PF06508 Queuosine biosynthesis protein QueC Aaci_2374 PF00133 tRNA synthetases class I (I, L, M and V) Aaci_2374 PF08264 Anticodon-binding domain of tRNA Aaci_2375 PF00561 alpha/beta hydrolase fold Aaci_2377 PF01546 Peptidase family M20/M25/M40 Aaci_2377 PF07687 Peptidase dimerisation domain Aaci_2378 PF06018 CodY GAF-like domain Aaci_2378 PF08222 CodY helix-turn-helix domain Aaci_2379 PF01371 Trp repressor protein Aaci_2380 PF06525 Sulfocyanin (SoxE) Aaci_2381 PF00394 Multicopper oxidase Aaci_2381 PF07731 Multicopper oxidase Aaci_2381 PF07732 Multicopper oxidase Aaci_2382 PF01814 Hemerythrin HHE cation binding domain Aaci_2384 PF01381 Helix-turn-helix Aaci_2385 PF00583 Acetyltransferase (GNAT) family Aaci_2386 PF13560 Helix-turn-helix domain Aaci_2387 PF01935 Domain of unknown function DUF87 Aaci_2389 PF01555 DNA methylase Aaci_2390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Aaci_2390 PF03129 Anticodon binding domain Aaci_2390 PF09180 Prolyl-tRNA synthetase, C-terminal Aaci_2394 PF00107 Zinc-binding dehydrogenase Aaci_2394 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_2395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_2395 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_2395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_2396 PF00501 AMP-binding enzyme Aaci_2396 PF13193 AMP-binding enzyme C-terminal domain Aaci_2397 PF00550 Phosphopantetheine attachment site Aaci_2398 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_2399 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Aaci_2399 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_2400 PF00501 AMP-binding enzyme Aaci_2400 PF13193 AMP-binding enzyme C-terminal domain Aaci_2401 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_2401 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_2401 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_2402 PF00793 DAHP synthetase I family Aaci_2404 PF03734 L,D-transpeptidase catalytic domain Aaci_2406 PF00999 Sodium/hydrogen exchanger family Aaci_2406 PF02080 TrkA-C domain Aaci_2410 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_2411 PF03061 Thioesterase superfamily Aaci_2412 PF13561 Enoyl-(Acyl carrier protein) reductase Aaci_2413 PF00109 Beta-ketoacyl synthase, N-terminal domain Aaci_2413 PF02801 Beta-ketoacyl synthase, C-terminal domain Aaci_2415 PF00248 Aldo/keto reductase family Aaci_2416 PF00702 haloacid dehalogenase-like hydrolase Aaci_2417 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aaci_2417 PF00672 HAMP domain Aaci_2418 PF03061 Thioesterase superfamily Aaci_2419 PF00551 Formyl transferase Aaci_2421 PF01903 CbiX Aaci_2422 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Aaci_2423 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Aaci_2423 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Aaci_2424 PF01507 Phosphoadenosine phosphosulfate reductase family Aaci_2427 PF13241 Putative NAD(P)-binding Aaci_2428 PF07690 Major Facilitator Superfamily Aaci_2429 PF00529 HlyD family secretion protein Aaci_2429 PF16576 Aaci_2429 Aaci_2430 PF00905 Penicillin binding protein transpeptidase domain Aaci_2430 PF03717 Penicillin-binding Protein dimerisation domain Aaci_2431 PF00535 Glycosyl transferase family 2 Aaci_2432 PF00877 NlpC/P60 family Aaci_2433 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) Aaci_2434 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Aaci_2435 PF03845 Aaci_2435 Aaci_2437 PF05504 Spore germination B3/ GerAC like, C-terminal Aaci_2438 PF03323 Aaci_2438 Aaci_2439 PF13180 PDZ domain Aaci_2439 PF13365 Trypsin-like peptidase domain Aaci_2440 PF01593 Flavin containing amine oxidoreductase Aaci_2441 PF00494 Squalene/phytoene synthase Aaci_2442 PF00494 Squalene/phytoene synthase Aaci_2443 PF13243 Prenyltransferase-like Aaci_2443 PF13249 Prenyltransferase-like Aaci_2444 PF01370 NAD dependent epimerase/dehydratase family Aaci_2445 PF01048 Phosphorylase superfamily Aaci_2446 PF04055 Radical SAM superfamily Aaci_2446 PF11946 Aaci_2446 Aaci_2446 PF13353 4Fe-4S single cluster domain Aaci_2447 PF01070 FMN-dependent dehydrogenase Aaci_2448 PF02779 Transketolase, pyrimidine binding domain Aaci_2448 PF02780 Transketolase, C-terminal domain Aaci_2448 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Aaci_2449 PF06695 Aaci_2449 Aaci_2450 PF01828 Peptidase A4 family Aaci_2451 PF01757 Aaci_2451 Aaci_2452 PF00501 AMP-binding enzyme Aaci_2453 PF01432 Peptidase family M3 Aaci_2455 PF00394 Multicopper oxidase Aaci_2455 PF07732 Multicopper oxidase Aaci_2456 PF07731 Multicopper oxidase Aaci_2456 PF07732 Multicopper oxidase Aaci_2457 PF00295 Glycosyl hydrolases family 28 Aaci_2458 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2459 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2460 PF13416 Bacterial extracellular solute-binding protein Aaci_2462 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Aaci_2462 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Aaci_2463 PF00356 Bacterial regulatory proteins, lacI family Aaci_2463 PF13377 Periplasmic binding protein-like domain Aaci_2464 PF01613 Flavin reductase like domain Aaci_2465 PF00929 Exonuclease Aaci_2466 PF03445 Aaci_2466 Aaci_2466 PF10335 Aaci_2466 Aaci_2467 PF00120 Glutamine synthetase, catalytic domain Aaci_2467 PF03951 Glutamine synthetase, beta-Grasp domain Aaci_2468 PF00909 Ammonium Transporter Family Aaci_2469 PF13419 Haloacid dehalogenase-like hydrolase Aaci_2470 PF00005 ABC transporter Aaci_2470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aaci_2471 PF00005 ABC transporter Aaci_2471 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Aaci_2472 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2472 PF12911 Aaci_2472 Aaci_2473 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2474 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_2475 PF00759 Glycosyl hydrolase family 9 Aaci_2475 PF02927 N-terminal ig-like domain of cellulase Aaci_2476 PF02445 Quinolinate synthetase A protein Aaci_2477 PF00890 FAD binding domain Aaci_2477 PF02910 Fumarate reductase flavoprotein C-term Aaci_2478 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Aaci_2478 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Aaci_2479 PF04055 Radical SAM superfamily Aaci_2480 PF00899 ThiF family Aaci_2481 PF05690 Thiazole biosynthesis protein ThiG Aaci_2482 PF02597 ThiS family Aaci_2483 PF01266 FAD dependent oxidoreductase Aaci_2484 PF02581 Thiamine monophosphate synthase/TENI Aaci_2485 PF01368 DHH family Aaci_2485 PF02833 DHHA2 domain Aaci_2486 PF05977 Transmembrane secretion effector Aaci_2487 PF07690 Major Facilitator Superfamily Aaci_2488 PF04519 Aaci_2488 Aaci_2489 PF04519 Aaci_2489 Aaci_2490 PF13171 Aaci_2490 Aaci_2491 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_2492 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_2493 PF12867 DinB superfamily Aaci_2494 PF01370 NAD dependent epimerase/dehydratase family Aaci_2494 PF08338 Domain of unknown function (DUF1731) Aaci_2495 PF07690 Major Facilitator Superfamily Aaci_2501 PF01965 DJ-1/PfpI family Aaci_2502 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Aaci_2503 PF13520 Amino acid permease Aaci_2504 PF00171 Aldehyde dehydrogenase family Aaci_2505 PF01391 Collagen triple helix repeat (20 copies) Aaci_2509 PF00535 Glycosyl transferase family 2 Aaci_2510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_2511 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aaci_2511 PF03466 LysR substrate binding domain Aaci_2512 PF00753 Metallo-beta-lactamase superfamily Aaci_2513 PF00239 Resolvase, N terminal domain Aaci_2514 PF01385 Aaci_2514 Aaci_2514 PF07282 Aaci_2514 Aaci_2514 PF12323 Aaci_2514 Aaci_2516 PF01261 Xylose isomerase-like TIM barrel Aaci_2517 PF00107 Zinc-binding dehydrogenase Aaci_2517 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_2518 PF07992 Pyridine nucleotide-disulphide oxidoreductase Aaci_2518 PF13192 Thioredoxin domain Aaci_2519 PF00578 AhpC/TSA family Aaci_2519 PF10417 C-terminal domain of 1-Cys peroxiredoxin Aaci_2520 PF01475 Ferric uptake regulator family Aaci_2521 PF00561 alpha/beta hydrolase fold Aaci_2522 PF13520 Amino acid permease Aaci_2523 PF00324 Amino acid permease Aaci_2524 PF01619 Proline dehydrogenase Aaci_2525 PF00158 Sigma-54 interaction domain Aaci_2525 PF02954 Bacterial regulatory protein, Fis family Aaci_2525 PF08448 PAS fold Aaci_2526 PF01565 FAD binding domain Aaci_2526 PF02913 FAD linked oxidases, C-terminal domain Aaci_2527 PF07690 Major Facilitator Superfamily Aaci_2528 PF12146 Putative lysophospholipase Aaci_2529 PF02652 Aaci_2529 Aaci_2530 PF01274 Malate synthase Aaci_2531 PF01614 Bacterial transcriptional regulator Aaci_2531 PF09339 IclR helix-turn-helix domain Aaci_2532 PF01565 FAD binding domain Aaci_2532 PF02913 FAD linked oxidases, C-terminal domain Aaci_2533 PF02754 Aaci_2533 Aaci_2533 PF13183 4Fe-4S dicluster domain Aaci_2534 PF01565 FAD binding domain Aaci_2534 PF02913 FAD linked oxidases, C-terminal domain Aaci_2535 PF13641 Glycosyltransferase like family 2 Aaci_2536 PF13994 Aaci_2536 Aaci_2537 PF13192 Thioredoxin domain Aaci_2538 PF08327 Activator of Hsp90 ATPase homolog 1-like protein Aaci_2538 PF12840 Helix-turn-helix domain Aaci_2540 PF00589 Phage integrase family Aaci_2540 PF13102 Phage integrase SAM-like domain Aaci_2545 PF13814 Aaci_2545 Aaci_2546 PF16793 Aaci_2546 Aaci_2550 PF04199 Putative cyclase Aaci_2551 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Aaci_2551 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Aaci_2553 PF01043 SecA preprotein cross-linking domain Aaci_2553 PF07516 SecA Wing and Scaffold domain Aaci_2553 PF07517 SecA DEAD-like domain Aaci_2554 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Aaci_2554 PF16321 Aaci_2554 Aaci_2556 PF01609 Transposase DDE domain Aaci_2556 PF14104 Aaci_2556 Aaci_2557 PF00535 Glycosyl transferase family 2 Aaci_2558 PF08241 Methyltransferase domain Aaci_2559 PF00535 Glycosyl transferase family 2 Aaci_2559 PF02561 Flagellar protein FliS Aaci_2560 PF02465 Aaci_2560 Aaci_2560 PF07195 Aaci_2560 Aaci_2560 PF07196 Flagellin hook IN motif Aaci_2561 PF00669 Bacterial flagellin N-terminal helical region Aaci_2561 PF00700 Bacterial flagellin C-terminal helical region Aaci_2562 PF00669 Bacterial flagellin N-terminal helical region Aaci_2562 PF00700 Bacterial flagellin C-terminal helical region Aaci_2563 PF00460 Flagella basal body rod protein Aaci_2563 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aaci_2565 PF04316 Anti-sigma-28 factor, FlgM Aaci_2568 PF00156 Phosphoribosyl transferase domain Aaci_2569 PF00512 His Kinase A (phospho-acceptor) domain Aaci_2569 PF00989 PAS fold Aaci_2569 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_2570 PF00072 Response regulator receiver domain Aaci_2570 PF00486 Transcriptional regulatory protein, C terminal Aaci_2571 PF13560 Helix-turn-helix domain Aaci_2573 PF00072 Response regulator receiver domain Aaci_2573 PF00196 Bacterial regulatory proteins, luxR family Aaci_2574 PF00438 S-adenosylmethionine synthetase, N-terminal domain Aaci_2574 PF02772 S-adenosylmethionine synthetase, central domain Aaci_2574 PF02773 S-adenosylmethionine synthetase, C-terminal domain Aaci_2575 PF03808 Aaci_2575 Aaci_2577 PF07690 Major Facilitator Superfamily Aaci_2578 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Aaci_2578 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Aaci_2578 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Aaci_2578 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Aaci_2579 PF01738 Dienelactone hydrolase family Aaci_2580 PF00994 Probable molybdopterin binding domain Aaci_2581 PF03807 NADP oxidoreductase coenzyme F420-dependent Aaci_2581 PF14748 Pyrroline-5-carboxylate reductase dimerisation Aaci_2582 PF00326 Prolyl oligopeptidase family Aaci_2585 PF02567 Phenazine biosynthesis-like protein Aaci_2586 PF03109 Aaci_2586 Aaci_2588 PF00849 RNA pseudouridylate synthase Aaci_2588 PF01479 S4 domain Aaci_2590 PF07293 Aaci_2590 Aaci_2592 PF02424 ApbE family Aaci_2593 PF01794 Aaci_2593 Aaci_2594 PF00356 Bacterial regulatory proteins, lacI family Aaci_2594 PF13377 Periplasmic binding protein-like domain Aaci_2595 PF00248 Aldo/keto reductase family Aaci_2596 PF02683 Aaci_2596 Aaci_2597 PF00578 AhpC/TSA family Aaci_2599 PF13472 GDSL-like Lipase/Acylhydrolase family Aaci_2601 PF02424 ApbE family Aaci_2602 PF04205 FMN-binding domain Aaci_2605 PF07690 Major Facilitator Superfamily Aaci_2606 PF02569 Pantoate-beta-alanine ligase Aaci_2607 PF02548 Ketopantoate hydroxymethyltransferase Aaci_2608 PF10727 Rossmann-like domain Aaci_2608 PF10728 Domain of unknown function (DUF2520) Aaci_2610 PF07690 Major Facilitator Superfamily Aaci_2611 PF13231 Aaci_2611 Aaci_2612 PF01475 Ferric uptake regulator family Aaci_2613 PF01297 Periplasmic solute binding protein family Aaci_2614 PF00005 ABC transporter Aaci_2615 PF00950 Aaci_2615 Aaci_2616 PF00950 Aaci_2616 Aaci_2617 PF03061 Thioesterase superfamily Aaci_2618 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Aaci_2618 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Aaci_2620 PF00563 EAL domain Aaci_2620 PF00990 GGDEF domain Aaci_2620 PF03707 Aaci_2620 Aaci_2621 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Aaci_2621 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Aaci_2622 PF07690 Major Facilitator Superfamily Aaci_2624 PF04234 CopC domain Aaci_2624 PF05425 Aaci_2624 Aaci_2625 PF07987 Domain of unkown function (DUF1775) Aaci_2626 PF01384 Aaci_2626 Aaci_2627 PF01865 Protein of unknown function DUF47 Aaci_2629 PF00480 ROK family Aaci_2630 PF00933 Glycosyl hydrolase family 3 N terminal domain Aaci_2630 PF01915 Glycosyl hydrolase family 3 C-terminal domain Aaci_2630 PF14310 Fibronectin type III-like domain Aaci_2631 PF01569 PAP2 superfamily Aaci_2633 PF13490 Putative zinc-finger Aaci_2634 PF04542 Sigma-70 region 2 Aaci_2634 PF08281 Sigma-70, region 4 Aaci_2638 PF13622 Thioesterase-like superfamily Aaci_2639 PF02583 Metal-sensitive transcriptional repressor Aaci_2640 PF01925 Aaci_2640 Aaci_2641 PF00581 Rhodanese-like domain Aaci_2641 PF00753 Metallo-beta-lactamase superfamily Aaci_2642 PF00581 Rhodanese-like domain Aaci_2642 PF01206 Sulfurtransferase TusA Aaci_2643 PF13686 DsrE/DsrF/DrsH-like family Aaci_2644 PF00581 Rhodanese-like domain Aaci_2645 PF01925 Aaci_2645 Aaci_2647 PF09617 Aaci_2647 Aaci_2649 PF00270 DEAD/DEAH box helicase Aaci_2649 PF00271 Helicase conserved C-terminal domain Aaci_2650 PF09827 CRISPR associated protein Cas2 Aaci_2651 PF01867 CRISPR associated protein Cas1 Aaci_2652 PF01930 Domain of unknown function DUF83 Aaci_2653 PF01964 ThiC family Aaci_2653 PF13667 ThiC-associated domain Aaci_2654 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Aaci_2655 PF03988 Aaci_2655 Aaci_2656 PF02086 D12 class N6 adenine-specific DNA methyltransferase Aaci_2657 PF00403 Heavy-metal-associated domain Aaci_2658 PF02583 Metal-sensitive transcriptional repressor Aaci_2659 PF03780 Aaci_2659 Aaci_2661 PF10031 Aaci_2661 Aaci_2662 PF03780 Aaci_2662 Aaci_2663 PF01037 AsnC family Aaci_2664 PF00155 Aminotransferase class I and II Aaci_2665 PF07690 Major Facilitator Superfamily Aaci_2666 PF00107 Zinc-binding dehydrogenase Aaci_2666 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_2667 PF00440 Bacterial regulatory proteins, tetR family Aaci_2667 PF14278 Aaci_2667 Aaci_2668 PF00202 Aminotransferase class-III Aaci_2669 PF01380 SIS domain Aaci_2669 PF13522 Glutamine amidotransferase domain Aaci_2670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Aaci_2670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Aaci_2670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Aaci_2670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Aaci_2671 PF07949 YbbR-like protein Aaci_2672 PF02457 DisA bacterial checkpoint controller nucleotide-binding Aaci_2673 PF13472 GDSL-like Lipase/Acylhydrolase family Aaci_2674 PF01522 Polysaccharide deacetylase Aaci_2676 PF01883 Domain of unknown function DUF59 Aaci_2676 PF10609 ParA/MinD ATPase like Aaci_2678 PF01520 N-acetylmuramoyl-L-alanine amidase Aaci_2679 PF00380 Ribosomal protein S9/S16 Aaci_2680 PF00572 Ribosomal protein L13 Aaci_2681 PF01416 tRNA pseudouridine synthase Aaci_2682 PF01196 Ribosomal protein L17 Aaci_2683 PF01000 RNA polymerase Rpb3/RpoA insert domain Aaci_2683 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Aaci_2683 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Aaci_2684 PF00163 Ribosomal protein S4/S9 N-terminal domain Aaci_2684 PF01479 S4 domain Aaci_2685 PF00411 Ribosomal protein S11 Aaci_2686 PF00416 Ribosomal protein S13/S18 Aaci_2687 PF00444 Ribosomal protein L36 Aaci_2688 PF01176 Translation initiation factor 1A / IF-1 Aaci_2690 PF00406 Adenylate kinase Aaci_2690 PF05191 Adenylate kinase, active site lid Aaci_2691 PF00344 SecY translocase Aaci_2692 PF00828 Ribosomal protein L18e/L15 Aaci_2693 PF00327 Ribosomal protein L30p/L7e Aaci_2694 PF00333 Ribosomal protein S5, N-terminal domain Aaci_2694 PF03719 Ribosomal protein S5, C-terminal domain Aaci_2695 PF00861 Ribosomal L18p/L5e family Aaci_2696 PF00347 Ribosomal protein L6 Aaci_2697 PF00410 Ribosomal protein S8 Aaci_2698 PF00253 Ribosomal protein S14p/S29e Aaci_2699 PF00281 Ribosomal protein L5 Aaci_2699 PF00673 ribosomal L5P family C-terminus Aaci_2700 PF00467 KOW motif Aaci_2700 PF17136 Aaci_2700 Aaci_2701 PF00238 Ribosomal protein L14p/L23e Aaci_2702 PF00366 Ribosomal protein S17 Aaci_2703 PF00831 Ribosomal L29 protein Aaci_2704 PF00252 Ribosomal protein L16p/L10e Aaci_2705 PF00189 Ribosomal protein S3, C-terminal domain Aaci_2705 PF07650 KH domain Aaci_2706 PF00237 Ribosomal protein L22p/L17e Aaci_2707 PF00203 Ribosomal protein S19 Aaci_2708 PF00181 Ribosomal Proteins L2, RNA binding domain Aaci_2708 PF03947 Ribosomal Proteins L2, C-terminal domain Aaci_2709 PF00276 Ribosomal protein L23 Aaci_2710 PF00573 Ribosomal protein L4/L1 family Aaci_2711 PF00297 Ribosomal protein L3 Aaci_2712 PF00338 Ribosomal protein S10p/S20e Aaci_2713 PF00009 Elongation factor Tu GTP binding domain Aaci_2713 PF03143 Elongation factor Tu C-terminal domain Aaci_2713 PF03144 Elongation factor Tu domain 2 Aaci_2714 PF00009 Elongation factor Tu GTP binding domain Aaci_2714 PF00679 Elongation factor G C-terminus Aaci_2714 PF03144 Elongation factor Tu domain 2 Aaci_2714 PF03764 Elongation factor G, domain IV Aaci_2714 PF14492 Elongation Factor G, domain II Aaci_2715 PF00177 Ribosomal protein S7p/S5e Aaci_2716 PF00164 Ribosomal protein S12/S23 Aaci_2717 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Aaci_2718 PF00623 RNA polymerase Rpb1, domain 2 Aaci_2718 PF04983 RNA polymerase Rpb1, domain 3 Aaci_2718 PF04997 RNA polymerase Rpb1, domain 1 Aaci_2718 PF04998 RNA polymerase Rpb1, domain 5 Aaci_2718 PF05000 RNA polymerase Rpb1, domain 4 Aaci_2719 PF00562 RNA polymerase Rpb2, domain 6 Aaci_2719 PF04560 RNA polymerase Rpb2, domain 7 Aaci_2719 PF04561 RNA polymerase Rpb2, domain 2 Aaci_2719 PF04563 RNA polymerase beta subunit Aaci_2719 PF04565 RNA polymerase Rpb2, domain 3 Aaci_2719 PF10385 RNA polymerase beta subunit external 1 domain Aaci_2720 PF05175 Methyltransferase small domain Aaci_2721 PF00542 Ribosomal protein L7/L12 C-terminal domain Aaci_2721 PF16320 Aaci_2721 Aaci_2722 PF00466 Ribosomal protein L10 Aaci_2723 PF00687 Ribosomal protein L1p/L10e family Aaci_2724 PF00298 Ribosomal protein L11, RNA binding domain Aaci_2724 PF03946 Ribosomal protein L11, N-terminal domain Aaci_2725 PF00467 KOW motif Aaci_2725 PF02357 Transcription termination factor nusG Aaci_2726 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Aaci_2727 PF00471 Ribosomal protein L33 Aaci_2728 PF04542 Sigma-70 region 2 Aaci_2728 PF08281 Sigma-70, region 4 Aaci_2729 PF05991 Aaci_2729 Aaci_2730 PF00588 SpoU rRNA Methylase family Aaci_2730 PF08032 RNA 2'-O ribose methyltransferase substrate binding Aaci_2731 PF00636 Ribonuclease III domain Aaci_2732 PF01406 tRNA synthetases class I (C) catalytic domain Aaci_2732 PF09190 DALR domain Aaci_2733 PF00749 tRNA synthetases class I (E and Q), catalytic domain Aaci_2734 PF02542 YgbB family Aaci_2735 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Aaci_2737 PF01066 CDP-alcohol phosphatidyltransferase Aaci_2738 PF02457 DisA bacterial checkpoint controller nucleotide-binding Aaci_2738 PF10635 DisA bacterial checkpoint controller linker region Aaci_2739 PF13481 AAA domain Aaci_2739 PF13541 Subunit ChlI of Mg-chelatase Aaci_2740 PF00004 ATPase family associated with various cellular activities (AAA) Aaci_2740 PF02151 UvrB/uvrC motif Aaci_2740 PF02861 Clp amino terminal domain Aaci_2740 PF07724 AAA domain (Cdc48 subfamily) Aaci_2740 PF10431 C-terminal, D2-small domain, of ClpB protein Aaci_2741 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain Aaci_2742 PF02151 UvrB/uvrC motif Aaci_2743 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) Aaci_2744 PF00196 Bacterial regulatory proteins, luxR family Aaci_2744 PF04542 Sigma-70 region 2 Aaci_2745 PF07977 FabA-like domain Aaci_2746 PF01066 CDP-alcohol phosphatidyltransferase Aaci_2747 PF00460 Flagella basal body rod protein Aaci_2747 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aaci_2748 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Aaci_2749 PF06723 MreB/Mbl protein Aaci_2750 PF12116 Stage III sporulation protein D Aaci_2751 PF01551 Peptidase family M23 Aaci_2752 PF08486 Aaci_2752 Aaci_2753 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Aaci_2754 PF08680 Protein of unknown function (DUF1779) Aaci_2755 PF06612 Aaci_2755 Aaci_2756 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Aaci_2756 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Aaci_2757 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aaci_2757 PF02874 ATP synthase alpha/beta family, beta-barrel domain Aaci_2758 PF00231 ATP synthase Aaci_2759 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aaci_2759 PF00306 ATP synthase alpha/beta chain, C terminal domain Aaci_2759 PF02874 ATP synthase alpha/beta family, beta-barrel domain Aaci_2760 PF00213 ATP synthase delta (OSCP) subunit Aaci_2761 PF00430 ATP synthase B/B' CF(0) Aaci_2762 PF00137 ATP synthase subunit C Aaci_2763 PF00119 ATP synthase A chain Aaci_2766 PF02350 UDP-N-acetylglucosamine 2-epimerase Aaci_2767 PF14681 Uracil phosphoribosyltransferase Aaci_2768 PF00464 Serine hydroxymethyltransferase Aaci_2769 PF04260 Protein of unknown function (DUF436) Aaci_2770 PF01451 Low molecular weight phosphotyrosine protein phosphatase Aaci_2771 PF02659 Aaci_2771 Aaci_2773 PF06912 Aaci_2773 Aaci_2777 PF01300 Telomere recombination Aaci_2777 PF03481 Putative GTP-binding controlling metal-binding Aaci_2778 PF09551 Aaci_2778 Aaci_2779 PF05175 Methyltransferase small domain Aaci_2780 PF00472 RF-1 domain Aaci_2780 PF03462 PCRF domain Aaci_2781 PF01197 Ribosomal protein L31 Aaci_2782 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Aaci_2782 PF07497 Rho termination factor, RNA-binding domain Aaci_2782 PF07498 Rho termination factor, N-terminal domain Aaci_2783 PF00923 Transaldolase Aaci_2784 PF00072 Response regulator receiver domain Aaci_2785 PF00117 Glutamine amidotransferase class-I Aaci_2785 PF06418 CTP synthase N-terminus Aaci_2786 PF05066 HB1, ASXL, restriction endonuclease HTH domain Aaci_2787 PF00378 Enoyl-CoA hydratase/isomerase family Aaci_2788 PF03746 LamB/YcsF family Aaci_2789 PF02626 Allophanate hydrolase subunit 2 Aaci_2790 PF02682 Allophanate hydrolase subunit 1 Aaci_2791 PF00535 Glycosyl transferase family 2 Aaci_2792 PF09148 Domain of unknown function (DUF1934) Aaci_2793 PF00491 Arginase family Aaci_2794 PF01564 Spermine/spermidine synthase Aaci_2794 PF17284 Aaci_2794 Aaci_2795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_2795 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_2795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Aaci_2796 PF00107 Zinc-binding dehydrogenase Aaci_2796 PF08240 Alcohol dehydrogenase GroES-like domain Aaci_2797 PF00905 Penicillin binding protein transpeptidase domain Aaci_2797 PF00912 Transglycosylase Aaci_2798 PF00155 Aminotransferase class I and II Aaci_2804 PF04055 Radical SAM superfamily Aaci_2804 PF06463 Molybdenum Cofactor Synthesis C Aaci_2804 PF13353 4Fe-4S single cluster domain Aaci_2805 PF02142 MGS-like domain Aaci_2806 PF00557 Metallopeptidase family M24 Aaci_2806 PF05195 Aminopeptidase P, N-terminal domain Aaci_2807 PF00326 Prolyl oligopeptidase family Aaci_2808 PF13673 Acetyltransferase (GNAT) domain Aaci_2810 PF01910 Domain of unknown function DUF77 Aaci_2811 PF07690 Major Facilitator Superfamily Aaci_2812 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Aaci_2812 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Aaci_2813 PF12850 Calcineurin-like phosphoesterase superfamily domain Aaci_2814 PF01053 Cys/Met metabolism PLP-dependent enzyme Aaci_2815 PF03601 Aaci_2815 Aaci_2816 PF01266 FAD dependent oxidoreductase Aaci_2817 PF01227 GTP cyclohydrolase I Aaci_2818 PF00348 Polyprenyl synthetase Aaci_2819 PF00494 Squalene/phytoene synthase Aaci_2820 PF01593 Flavin containing amine oxidoreductase Aaci_2821 PF00067 Cytochrome P450 Aaci_2823 PF02660 Aaci_2823 Aaci_2824 PF13641 Glycosyltransferase like family 2 Aaci_2825 PF13559 Aaci_2825 Aaci_2826 PF01882 Aaci_2826 Aaci_2827 PF02560 Cyanate lyase C-terminal domain Aaci_2828 PF12867 DinB superfamily Aaci_2829 PF01636 Phosphotransferase enzyme family Aaci_2830 PF00356 Bacterial regulatory proteins, lacI family Aaci_2830 PF13377 Periplasmic binding protein-like domain Aaci_2831 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Aaci_2831 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Aaci_2832 PF01048 Phosphorylase superfamily Aaci_2833 PF00132 Bacterial transferase hexapeptide (six repeats) Aaci_2833 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal Aaci_2833 PF14602 Hexapeptide repeat of succinyl-transferase Aaci_2834 PF01546 Peptidase family M20/M25/M40 Aaci_2834 PF07687 Peptidase dimerisation domain Aaci_2836 PF00155 Aminotransferase class I and II Aaci_2838 PF01828 Peptidase A4 family Aaci_2839 PF07690 Major Facilitator Superfamily Aaci_2840 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Aaci_2840 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Aaci_2841 PF00005 ABC transporter Aaci_2841 PF08402 TOBE domain Aaci_2842 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2843 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2844 PF13531 Bacterial extracellular solute-binding protein Aaci_2845 PF00005 ABC transporter Aaci_2846 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2847 PF00296 Luciferase-like monooxygenase Aaci_2848 PF09084 NMT1/THI5 like Aaci_2849 PF03358 NADPH-dependent FMN reductase Aaci_2850 PF10055 Aaci_2850 Aaci_2851 PF00376 MerR family regulatory protein Aaci_2851 PF09278 MerR, DNA binding Aaci_2852 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Aaci_2852 PF02770 Acyl-CoA dehydrogenase, middle domain Aaci_2854 PF04055 Radical SAM superfamily Aaci_2854 PF06968 Biotin and Thiamin Synthesis associated domain Aaci_2855 PF13500 AAA domain Aaci_2856 PF00155 Aminotransferase class I and II Aaci_2857 PF00202 Aminotransferase class-III Aaci_2858 PF01494 FAD binding domain Aaci_2859 PF03649 Aaci_2859 Aaci_2860 PF00005 ABC transporter Aaci_2861 PF00107 Zinc-binding dehydrogenase Aaci_2861 PF16884 Aaci_2861 Aaci_2863 PF03734 L,D-transpeptidase catalytic domain Aaci_2865 PF02558 Ketopantoate reductase PanE/ApbA Aaci_2865 PF08546 Ketopantoate reductase PanE/ApbA C terminal Aaci_2866 PF06089 Aaci_2866 Aaci_2867 PF00990 GGDEF domain Aaci_2868 PF01055 Glycosyl hydrolases family 31 Aaci_2868 PF13802 Galactose mutarotase-like Aaci_2868 PF17137 Aaci_2868 Aaci_2869 PF00128 Alpha amylase, catalytic domain Aaci_2869 PF02903 Alpha amylase, N-terminal ig-like domain Aaci_2870 PF00356 Bacterial regulatory proteins, lacI family Aaci_2870 PF13377 Periplasmic binding protein-like domain Aaci_2871 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2872 PF00528 Binding-protein-dependent transport system inner membrane component Aaci_2873 PF01547 Bacterial extracellular solute-binding protein Aaci_2874 PF00128 Alpha amylase, catalytic domain Aaci_2875 PF07859 alpha/beta hydrolase fold Aaci_2876 PF02678 Pirin Aaci_2876 PF05726 Pirin C-terminal cupin domain Aaci_2877 PF00293 NUDIX domain Aaci_2878 PF12840 Helix-turn-helix domain Aaci_2879 PF00083 Sugar (and other) transporter Aaci_2880 PF06166 Aaci_2880 Aaci_2881 PF06149 Aaci_2881 Aaci_2884 PF00171 Aldehyde dehydrogenase family Aaci_2885 PF00696 Amino acid kinase family Aaci_2885 PF01472 PUA domain Aaci_2886 PF01557 Fumarylacetoacetate (FAA) hydrolase family Aaci_2887 PF01055 Glycosyl hydrolases family 31 Aaci_2887 PF13802 Galactose mutarotase-like Aaci_2888 PF00582 Universal stress protein family Aaci_2889 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Aaci_2890 PF02311 AraC-like ligand binding domain Aaci_2890 PF12833 Helix-turn-helix domain Aaci_2891 PF02449 Beta-galactosidase Aaci_2891 PF08532 Beta-galactosidase trimerisation domain Aaci_2891 PF08533 Beta-galactosidase C-terminal domain Aaci_2892 PF00909 Ammonium Transporter Family Aaci_2893 PF00543 Nitrogen regulatory protein P-II Aaci_2894 PF06964 Alpha-L-arabinofuranosidase C-terminus Aaci_2895 PF13412 Winged helix-turn-helix DNA-binding Aaci_2896 PF13685 Iron-containing alcohol dehydrogenase Aaci_2897 PF02610 L-arabinose isomerase Aaci_2897 PF11762 L-arabinose isomerase C-terminal domain Aaci_2898 PF00596 Class II Aldolase and Adducin N-terminal domain Aaci_2899 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Aaci_2899 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Aaci_2900 PF00083 Sugar (and other) transporter Aaci_2901 PF00392 Bacterial regulatory proteins, gntR family Aaci_2901 PF13377 Periplasmic binding protein-like domain Aaci_2902 PF13407 Periplasmic binding protein domain Aaci_2903 PF02653 Aaci_2903 Aaci_2904 PF00005 ABC transporter Aaci_2905 PF00392 Bacterial regulatory proteins, gntR family Aaci_2905 PF13377 Periplasmic binding protein-like domain Aaci_2906 PF07690 Major Facilitator Superfamily Aaci_2907 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) Aaci_2908 PF00881 Nitroreductase family Aaci_2909 PF07690 Major Facilitator Superfamily Aaci_2910 PF13437 HlyD family secretion protein Aaci_2911 PF00226 DnaJ domain Aaci_2912 PF00106 short chain dehydrogenase Aaci_2914 PF03595 Voltage-dependent anion channel Aaci_2915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Aaci_2915 PF03466 LysR substrate binding domain Aaci_2916 PF02590 Predicted SPOUT methyltransferase Aaci_2917 PF13180 PDZ domain Aaci_2917 PF13365 Trypsin-like peptidase domain Aaci_2918 PF12706 Beta-lactamase superfamily domain Aaci_2919 PF09648 YycH protein Aaci_2920 PF07435 YycH protein Aaci_2921 PF00512 His Kinase A (phospho-acceptor) domain Aaci_2921 PF00672 HAMP domain Aaci_2921 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_2921 PF13188 PAS domain Aaci_2922 PF00072 Response regulator receiver domain Aaci_2922 PF00486 Transcriptional regulatory protein, C terminal Aaci_2924 PF00772 DnaB-like helicase N terminal domain Aaci_2924 PF03796 DnaB-like helicase C terminal domain Aaci_2925 PF01281 Ribosomal protein L9, N-terminal domain Aaci_2925 PF03948 Ribosomal protein L9, C-terminal domain Aaci_2926 PF12643 Aaci_2926 Aaci_2928 PF01084 Ribosomal protein S18 Aaci_2929 PF00436 Single-strand binding protein family Aaci_2930 PF01250 Ribosomal protein S6 Aaci_2931 PF01926 50S ribosome-binding GTPase Aaci_2931 PF06071 Protein of unknown function (DUF933) Aaci_2933 PF00384 Molybdopterin oxidoreductase Aaci_2933 PF01568 Molydopterin dinucleotide binding domain Aaci_2933 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Aaci_2934 PF06107 Aaci_2934 Aaci_2935 PF00924 Mechanosensitive ion channel Aaci_2937 PF06866 Aaci_2937 Aaci_2938 PF14584 Aaci_2938 Aaci_2939 PF04474 Aaci_2939 Aaci_2940 PF02195 ParB-like nuclease domain Aaci_2941 PF13614 AAA domain Aaci_2942 PF02195 ParB-like nuclease domain Aaci_2943 PF02527 rRNA small subunit methyltransferase G Aaci_2944 PF01134 Glucose inhibited division protein A Aaci_2944 PF13932 GidA associated domain 3 Aaci_2945 PF01926 50S ribosome-binding GTPase Aaci_2945 PF10396 GTP-binding protein TrmE N-terminus Aaci_2945 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE Aaci_2946 PF01424 R3H domain Aaci_2946 PF13083 KH domain Aaci_2946 PF14804 Jag N-terminus Aaci_2947 PF02096 60Kd inner membrane protein Aaci_2948 PF01809 Aaci_2948 Aaci_2949 PF00825 Ribonuclease P Aaci_2950 PF00468 Ribosomal protein L34 Aaci_2954 PF00717 Peptidase S24-like Aaci_2954 PF01381 Helix-turn-helix Aaci_2963 PF00437 Type II/IV secretion system protein Aaci_2965 PF08666 SAF domain Aaci_2967 PF01464 Transglycosylase SLT domain Aaci_2968 PF13487 HD domain Aaci_2969 PF09851 Aaci_2969 Aaci_2973 PF01935 Domain of unknown function DUF87 Aaci_2979 PF13614 AAA domain Aaci_2981 PF13730 Aaci_2981 Aaci_2982 PF03050 Aaci_2982 Aaci_2982 PF13005 Aaci_2982 Aaci_2982 PF13007 Aaci_2982 Aaci_2983 PF05717 Aaci_2983 Aaci_2987 PF13535 ATP-grasp domain Aaci_2988 PF07690 Major Facilitator Superfamily Aaci_2989 PF13847 Methyltransferase domain Aaci_2990 PF04055 Radical SAM superfamily Aaci_2991 PF02492 CobW/HypB/UreG, nucleotide-binding domain Aaci_2994 PF13420 Acetyltransferase (GNAT) domain Aaci_2995 PF00589 Phage integrase family Aaci_2996 PF01850 PIN domain Aaci_2999 PF14284 Aaci_2999 Aaci_3003 PF08401 Aaci_3003 Aaci_3004 PF04002 RadC-like JAB domain Aaci_3005 PF00712 DNA polymerase III beta subunit, N-terminal domain Aaci_3005 PF02767 DNA polymerase III beta subunit, central domain Aaci_3005 PF02768 DNA polymerase III beta subunit, C-terminal domain Aaci_3006 PF01476 LysM domain Aaci_3009 PF13476 AAA domain Aaci_3011 PF00436 Single-strand binding protein family Aaci_3014 PF01807 CHC2 zinc finger Aaci_3017 PF12696 TraM recognition site of TraD and TraG Aaci_3018 PF04307 Aaci_3018 Aaci_3020 PF00271 Helicase conserved C-terminal domain Aaci_3020 PF04851 Type III restriction enzyme, res subunit Aaci_3021 PF00216 Bacterial DNA-binding protein Aaci_3023 PF00580 UvrD/REP helicase N-terminal domain Aaci_3023 PF13361 UvrD-like helicase C-terminal domain Aaci_3025 PF00817 impB/mucB/samB family Aaci_3025 PF11799 impB/mucB/samB family C-terminal domain Aaci_3026 PF08863 Aaci_3026 Aaci_3030 PF06666 Aaci_3030 Aaci_3031 PF02195 ParB-like nuclease domain Aaci_3034 PF01381 Helix-turn-helix Aaci_3046 PF13730 Aaci_3046 Aaci_3049 PF08281 Sigma-70, region 4 Aaci_3053 PF05717 Aaci_3053 Aaci_3055 PF01609 Transposase DDE domain Aaci_3056 PF03050 Aaci_3056 Aaci_3056 PF13005 Aaci_3056 Aaci_3056 PF13007 Aaci_3056 Aaci_3056 PF13817 Aaci_3056 Aaci_3059 PF12796 Ankyrin repeats (3 copies) Aaci_3060 PF01609 Transposase DDE domain Aaci_3061 PF07995 Glucose / Sorbosone dehydrogenase Aaci_3063 PF01381 Helix-turn-helix Aaci_3064 PF05437 Aaci_3064 Aaci_3065 PF03591 Aaci_3065 Aaci_3066 PF06983 3-demethylubiquinone-9 3-methyltransferase Aaci_3070 PF03323 Aaci_3070 Aaci_3073 PF03845 Aaci_3073 Aaci_3075 PF13424 Tetratricopeptide repeat Aaci_3076 PF00563 EAL domain Aaci_3076 PF09388 Spo0E like sporulation regulatory protein Aaci_3078 PF00072 Response regulator receiver domain Aaci_3079 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Aaci_3079 PF07730 Histidine kinase Aaci_3080 PF07719 Tetratricopeptide repeat Aaci_3080 PF13487 HD domain Aaci_3086 PF01555 DNA methylase Aaci_3087 PF04851 Type III restriction enzyme, res subunit Aaci_3088 PF04542 Sigma-70 region 2 Aaci_3088 PF08281 Sigma-70, region 4 Aaci_3091 PF06094 AIG2-like family Aaci_3092 PF08281 Sigma-70, region 4 Aaci_3101 PF04014 Antidote-toxin recognition MazE Aaci_3102 PF01850 PIN domain Aaci_3104 PF02195 ParB-like nuclease domain Aaci_3107 PF02498 Aaci_3107 Aaci_3112 PF04307 Aaci_3112 Aaci_3115 PF12846 AAA-like domain Aaci_3118 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Aaci_3119 PF08666 SAF domain Aaci_3120 PF00437 Type II/IV secretion system protein Aaci_3132 PF00872 Aaci_3132 Aaci_3134 PF00563 EAL domain Aaci_3136 PF02600 Disulfide bond formation protein DsbB Aaci_3139 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Aaci_3140 PF13144 SAF-like Aaci_3141 PF00437 Type II/IV secretion system protein Aaci_3143 PF00482 Type II secretion system (T2SS), protein F Aaci_3146 PF01478 Type IV leader peptidase family Aaci_3150 PF02498 Aaci_3150