locus-tag class description NZD89_00005 PF00308 Bacterial dnaA protein NZD89_00005 PF08299 Bacterial dnaA protein helix-turn-helix NZD89_00005 PF11638 DnaA N-terminal domain NZD89_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NZD89_00010 PF02767 DNA polymerase III beta subunit, central domain NZD89_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NZD89_00015 PF01479 S4 domain NZD89_00015 PF00579 tRNA synthetases class I (W and Y) NZD89_00020 PF02463 RecF/RecN/SMC N terminal domain NZD89_00025 PF00204 DNA gyrase B NZD89_00025 PF00986 DNA gyrase B subunit, carboxyl terminus NZD89_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_00025 PF01751 Toprim domain NZD89_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller NZD89_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A NZD89_00050 PF00293 NUDIX domain NZD89_00065 PF00478 IMP dehydrogenase / GMP reductase domain NZD89_00065 PF00571 CBS domain NZD89_00070 PF01680 SOR/SNZ family NZD89_00075 PF01174 SNO glutamine amidotransferase family NZD89_00080 PF02403 Seryl-tRNA synthetase N-terminal domain NZD89_00080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NZD89_00110 PF09299 Mu transposase, C-terminal NZD89_00110 PF00665 Integrase core domain NZD89_00130 PF01695 IstB-like ATP binding protein NZD89_00140 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NZD89_00140 PF01348 Type II intron maturase NZD89_00170 PF00106 short chain dehydrogenase NZD89_00175 PF01553 Acyltransferase NZD89_00180 PF00781 Diacylglycerol kinase catalytic domain NZD89_00185 PF00534 Glycosyl transferases group 1 NZD89_00185 PF13439 Glycosyltransferase Family 4 NZD89_00255 PF00892 EamA-like transporter family NZD89_00265 PF01695 IstB-like ATP binding protein NZD89_00270 PF00665 Integrase core domain NZD89_00270 PF02796 Helix-turn-helix domain of resolvase NZD89_00305 PF02899 Phage integrase, N-terminal SAM-like domain NZD89_00305 PF00589 Phage integrase family NZD89_00335 PF08362 YcdC-like protein, C-terminal region NZD89_00335 PF00440 Bacterial regulatory proteins, tetR family NZD89_00340 PF16123 Hydroxyacylglutathione hydrolase C-terminus NZD89_00340 PF00753 Metallo-beta-lactamase superfamily NZD89_00350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NZD89_00350 PF02770 Acyl-CoA dehydrogenase, middle domain NZD89_00350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NZD89_00360 PF13452 N-terminal half of MaoC dehydratase NZD89_00385 PF13380 CoA binding domain NZD89_00385 PF13607 Succinyl-CoA ligase like flavodoxin domain NZD89_00390 PF07690 Major Facilitator Superfamily NZD89_00410 PF14659 Phage integrase, N-terminal SAM-like domain NZD89_00410 PF00589 Phage integrase family NZD89_00440 PF13610 DDE domain NZD89_00450 PF00011 Hsp20/alpha crystallin family NZD89_00475 PF13302 Acetyltransferase (GNAT) domain NZD89_00485 PF02659 Putative manganese efflux pump NZD89_00495 PF00535 Glycosyl transferase family 2 NZD89_00495 PF13181 Tetratricopeptide repeat NZD89_00505 PF07693 KAP family P-loop domain NZD89_00510 PF02796 Helix-turn-helix domain of resolvase NZD89_00510 PF00239 Resolvase, N terminal domain NZD89_00535 PF03323 Bacillus/Clostridium GerA spore germination protein NZD89_00545 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NZD89_00545 PF13378 Enolase C-terminal domain-like NZD89_00550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NZD89_00550 PF13378 Enolase C-terminal domain-like NZD89_00555 PF07690 Major Facilitator Superfamily NZD89_00560 PF03301 Tryptophan 2,3-dioxygenase NZD89_00565 PF00266 Aminotransferase class-V NZD89_00570 PF04199 Putative cyclase NZD89_00575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_00575 PF00989 PAS fold NZD89_00575 PF08447 PAS fold NZD89_00575 PF00512 His Kinase A (phospho-acceptor) domain NZD89_00580 PF00183 Hsp90 protein NZD89_00590 PF07745 Glycosyl hydrolase family 53 NZD89_00595 PF00356 Bacterial regulatory proteins, lacI family NZD89_00605 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_00610 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_00615 PF08532 Beta-galactosidase trimerisation domain NZD89_00615 PF08533 Beta-galactosidase C-terminal domain NZD89_00615 PF02449 Beta-galactosidase NZD89_00620 PF07745 Glycosyl hydrolase family 53 NZD89_00625 PF00356 Bacterial regulatory proteins, lacI family NZD89_00655 PF00893 Small Multidrug Resistance protein NZD89_00660 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_00665 PF03009 Glycerophosphoryl diester phosphodiesterase family NZD89_00675 PF00083 Sugar (and other) transporter NZD89_00680 PF02540 NAD synthase NZD89_00685 PF00731 AIR carboxylase NZD89_00690 PF01969 Protein of unknown function DUF111 NZD89_00705 PF10114 Sensory domain found in PocR NZD89_00705 PF12833 Helix-turn-helix domain NZD89_00720 PF00356 Bacterial regulatory proteins, lacI family NZD89_00730 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_00740 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_00745 PF02056 Family 4 glycosyl hydrolase NZD89_00745 PF11975 Family 4 glycosyl hydrolase C-terminal domain NZD89_00750 PF02056 Family 4 glycosyl hydrolase NZD89_00750 PF11975 Family 4 glycosyl hydrolase C-terminal domain NZD89_00755 PF17853 GGDEF-like domain NZD89_00755 PF13556 PucR C-terminal helix-turn-helix domain NZD89_00755 PF07905 Purine catabolism regulatory protein-like family NZD89_00760 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NZD89_00790 PF00381 PTS HPr component phosphorylation site NZD89_00795 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NZD89_00800 PF02378 Phosphotransferase system, EIIC NZD89_00800 PF00367 phosphotransferase system, EIIB NZD89_00805 PF16657 Maltogenic Amylase, C-terminal domain NZD89_00805 PF00128 Alpha amylase, catalytic domain NZD89_00810 PF07702 UTRA domain NZD89_00810 PF00392 Bacterial regulatory proteins, gntR family NZD89_00815 PF01047 MarR family NZD89_00815 PF00480 ROK family NZD89_00820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_00820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_00825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_00825 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_00830 PF01869 BadF/BadG/BcrA/BcrD ATPase family NZD89_00840 PF01614 Bacterial transcriptional regulator NZD89_00840 PF09339 IclR helix-turn-helix domain NZD89_00855 PF01470 Pyroglutamyl peptidase NZD89_00860 PF02682 Carboxyltransferase domain, subdomain C and D NZD89_00865 PF02626 Carboxyltransferase domain, subdomain A and B NZD89_00870 PF03746 LamB/YcsF family NZD89_00880 PF00474 Sodium:solute symporter family NZD89_00900 PF01266 FAD dependent oxidoreductase NZD89_00910 PF00909 Ammonium Transporter Family NZD89_00915 PF03951 Glutamine synthetase, beta-Grasp domain NZD89_00915 PF00120 Glutamine synthetase, catalytic domain NZD89_00930 PF13188 PAS domain NZD89_00930 PF00989 PAS fold NZD89_00930 PF00512 His Kinase A (phospho-acceptor) domain NZD89_00930 PF13426 PAS domain NZD89_00930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_00940 PF01497 Periplasmic binding protein NZD89_00950 PF07690 Major Facilitator Superfamily NZD89_00965 PF00512 His Kinase A (phospho-acceptor) domain NZD89_00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_00965 PF00989 PAS fold NZD89_00965 PF16736 Single Cache-like NZD89_00970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_00975 PF01554 MatE NZD89_00980 PF01546 Peptidase family M20/M25/M40 NZD89_00980 PF07687 Peptidase dimerisation domain NZD89_00995 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_00995 PF00107 Zinc-binding dehydrogenase NZD89_01015 PF02547 Queuosine biosynthesis protein NZD89_01025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_01025 PF07730 Histidine kinase NZD89_01040 PF00989 PAS fold NZD89_01040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_01040 PF00512 His Kinase A (phospho-acceptor) domain NZD89_01040 PF08447 PAS fold NZD89_01045 PF01476 LysM domain NZD89_01045 PF00877 NlpC/P60 family NZD89_01045 PF08239 Bacterial SH3 domain NZD89_01050 PF09297 NADH pyrophosphatase zinc ribbon domain NZD89_01050 PF00293 NUDIX domain NZD89_01065 PF03051 Peptidase C1-like family NZD89_01070 PF00265 Thymidine kinase NZD89_01080 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_01080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NZD89_01085 PF00480 ROK family NZD89_01090 PF13407 Periplasmic binding protein domain NZD89_01095 PF00005 ABC transporter NZD89_01100 PF02653 Branched-chain amino acid transport system / permease component NZD89_01105 PF02073 Thermophilic metalloprotease (M29) NZD89_01110 PF00005 ABC transporter NZD89_01110 PF16326 ABC transporter C-terminal domain NZD89_01110 PF12848 ABC transporter NZD89_01125 PF00440 Bacterial regulatory proteins, tetR family NZD89_01125 PF17932 Tetracyclin repressor-like, C-terminal domain NZD89_01140 PF13538 UvrD-like helicase C-terminal domain NZD89_01150 PF00149 Calcineurin-like phosphoesterase NZD89_01165 PF00480 ROK family NZD89_01170 PF03698 Uncharacterised protein family (UPF0180) NZD89_01220 PF03079 ARD/ARD' family NZD89_01225 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain NZD89_01225 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain NZD89_01235 PF00596 Class II Aldolase and Adducin N-terminal domain NZD89_01240 PF13537 Glutamine amidotransferase domain NZD89_01240 PF00733 Asparagine synthase NZD89_01255 PF14437 MafB19-like deaminase NZD89_01275 PF00989 PAS fold NZD89_01275 PF00512 His Kinase A (phospho-acceptor) domain NZD89_01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_01280 PF12169 DNA polymerase III subunits gamma and tau domain III NZD89_01285 PF02575 YbaB/EbfC DNA-binding family NZD89_01290 PF02132 RecR protein NZD89_01290 PF13662 Toprim domain NZD89_01300 PF07441 SigmaK-factor processing regulatory protein BofA NZD89_01305 PF14667 Polysaccharide biosynthesis C-terminal domain NZD89_01305 PF01943 Polysaccharide biosynthesis protein NZD89_01315 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NZD89_01315 PF01276 Orn/Lys/Arg decarboxylase, major domain NZD89_01320 PF02223 Thymidylate kinase NZD89_01325 PF06153 Cyclic-di-AMP receptor NZD89_01335 PF04468 PSP1 C-terminal conserved region NZD89_01340 PF06156 Initiation control protein YabA NZD89_01345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NZD89_01350 PF18277 AbrB C-terminal domain NZD89_01350 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NZD89_01355 PF08264 Anticodon-binding domain of tRNA NZD89_01355 PF09334 tRNA synthetases class I (M) NZD89_01355 PF01588 Putative tRNA binding domain NZD89_01360 PF01026 TatD related DNase NZD89_01365 PF13331 Domain of unknown function (DUF4093) NZD89_01365 PF13662 Toprim domain NZD89_01370 PF00398 Ribosomal RNA adenine dimethylase NZD89_01385 PF05582 YabG peptidase U57 NZD89_01390 PF06257 Biofilm formation stimulator VEG NZD89_01395 PF00269 Small, acid-soluble spore proteins, alpha/beta type NZD89_01400 PF03575 Peptidase family S51 NZD89_01405 PF08443 RimK-like ATP-grasp domain NZD89_01405 PF08245 Mur ligase middle domain NZD89_01405 PF02875 Mur ligase family, glutamate ligase domain NZD89_01410 PF00288 GHMP kinases N terminal domain NZD89_01410 PF08544 GHMP kinases C terminal NZD89_01415 PF09182 Bacterial purine repressor, N-terminal NZD89_01415 PF00156 Phosphoribosyl transferase domain NZD89_01420 PF01042 Endoribonuclease L-PSP NZD89_01425 PF04026 SpoVG NZD89_01430 PF00132 Bacterial transferase hexapeptide (six repeats) NZD89_01430 PF00483 Nucleotidyl transferase NZD89_01435 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NZD89_01435 PF14572 Phosphoribosyl synthetase-associated domain NZD89_01440 PF01195 Peptidyl-tRNA hydrolase NZD89_01450 PF02559 CarD-like/TRCF domain NZD89_01450 PF00270 DEAD/DEAH box helicase NZD89_01450 PF00271 Helicase conserved C-terminal domain NZD89_01450 PF03461 TRCF domain NZD89_01450 PF17757 UvrB interaction domain NZD89_01455 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NZD89_01455 PF15714 Stage V sporulation protein T C-terminal, transcription factor NZD89_01460 PF01943 Polysaccharide biosynthesis protein NZD89_01460 PF14667 Polysaccharide biosynthesis C-terminal domain NZD89_01465 PF03819 MazG nucleotide pyrophosphohydrolase domain NZD89_01465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NZD89_01470 PF00216 Bacterial DNA-binding protein NZD89_01475 PF01479 S4 domain NZD89_01495 PF00575 S1 RNA binding domain NZD89_01515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NZD89_01520 PF07228 Stage II sporulation protein E (SpoIIE) NZD89_01525 PF00092 von Willebrand factor type A domain NZD89_01535 PF01171 PP-loop family NZD89_01535 PF09179 TilS substrate binding domain NZD89_01535 PF11734 TilS substrate C-terminal domain NZD89_01540 PF00156 Phosphoribosyl transferase domain NZD89_01545 PF01434 Peptidase family M41 NZD89_01545 PF00004 ATPase family associated with various cellular activities (AAA) NZD89_01545 PF17862 AAA+ lid domain NZD89_01545 PF06480 FtsH Extracellular NZD89_01550 PF01966 HD domain NZD89_01550 PF11871 Domain of unknown function (DUF3391) NZD89_01555 PF03309 Type III pantothenate kinase NZD89_01560 PF01430 Hsp33 protein NZD89_01565 PF00809 Pterin binding enzyme NZD89_01570 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NZD89_01575 PF01381 Helix-turn-helix NZD89_01580 PF03449 Transcription elongation factor, N-terminal NZD89_01580 PF01272 Transcription elongation factor, GreA/GreB, C-term NZD89_01585 PF01336 OB-fold nucleic acid binding domain NZD89_01585 PF00152 tRNA synthetases class II (D, K and N) NZD89_01630 PF17932 Tetracyclin repressor-like, C-terminal domain NZD89_01630 PF00440 Bacterial regulatory proteins, tetR family NZD89_01635 PF17727 CtsR C-terminal dimerization domain NZD89_01635 PF05848 CtsR N-terminal HTH domain NZD89_01640 PF02151 UvrB/uvrC motif NZD89_01645 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain NZD89_01650 PF02861 Clp amino terminal domain, pathogenicity island component NZD89_01650 PF17871 AAA lid domain NZD89_01650 PF10431 C-terminal, D2-small domain, of ClpB protein NZD89_01650 PF07724 AAA domain (Cdc48 subfamily) NZD89_01650 PF00004 ATPase family associated with various cellular activities (AAA) NZD89_01655 PF18073 Rubredoxin metal binding domain NZD89_01660 PF10635 DisA bacterial checkpoint controller linker region NZD89_01660 PF02457 DisA bacterial checkpoint controller nucleotide-binding NZD89_01665 PF01066 CDP-alcohol phosphatidyltransferase NZD89_01675 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NZD89_01680 PF02542 YgbB family NZD89_01685 PF00749 tRNA synthetases class I (E and Q), catalytic domain NZD89_01690 PF09190 DALR domain NZD89_01690 PF01406 tRNA synthetases class I (C) catalytic domain NZD89_01695 PF00636 Ribonuclease III domain NZD89_01700 PF00588 SpoU rRNA Methylase family NZD89_01700 PF08032 RNA 2'-O ribose methyltransferase substrate binding NZD89_01710 PF04542 Sigma-70 region 2 NZD89_01710 PF08281 Sigma-70, region 4 NZD89_01715 PF00471 Ribosomal protein L33 NZD89_01725 PF00467 KOW motif NZD89_01725 PF02357 Transcription termination factor nusG NZD89_01730 PF00298 Ribosomal protein L11, RNA binding domain NZD89_01730 PF03946 Ribosomal protein L11, N-terminal domain NZD89_01735 PF00687 Ribosomal protein L1p/L10e family NZD89_01740 PF00466 Ribosomal protein L10 NZD89_01745 PF00542 Ribosomal protein L7/L12 C-terminal domain NZD89_01745 PF16320 Ribosomal protein L7/L12 dimerisation domain NZD89_01750 PF05175 Methyltransferase small domain NZD89_01755 PF00562 RNA polymerase Rpb2, domain 6 NZD89_01755 PF04560 RNA polymerase Rpb2, domain 7 NZD89_01755 PF10385 RNA polymerase beta subunit external 1 domain NZD89_01755 PF04565 RNA polymerase Rpb2, domain 3 NZD89_01755 PF04561 RNA polymerase Rpb2, domain 2 NZD89_01755 PF04563 RNA polymerase beta subunit NZD89_01760 PF04998 RNA polymerase Rpb1, domain 5 NZD89_01760 PF05000 RNA polymerase Rpb1, domain 4 NZD89_01760 PF04983 RNA polymerase Rpb1, domain 3 NZD89_01760 PF00623 RNA polymerase Rpb1, domain 2 NZD89_01760 PF04997 RNA polymerase Rpb1, domain 1 NZD89_01765 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family NZD89_01770 PF00164 Ribosomal protein S12/S23 NZD89_01775 PF00177 Ribosomal protein S7p/S5e NZD89_01780 PF03144 Elongation factor Tu domain 2 NZD89_01780 PF00679 Elongation factor G C-terminus NZD89_01780 PF03764 Elongation factor G, domain IV NZD89_01780 PF14492 Elongation Factor G, domain II NZD89_01780 PF00009 Elongation factor Tu GTP binding domain NZD89_01785 PF00009 Elongation factor Tu GTP binding domain NZD89_01785 PF03144 Elongation factor Tu domain 2 NZD89_01785 PF03143 Elongation factor Tu C-terminal domain NZD89_01790 PF00338 Ribosomal protein S10p/S20e NZD89_01795 PF00297 Ribosomal protein L3 NZD89_01800 PF00573 Ribosomal protein L4/L1 family NZD89_01805 PF00276 Ribosomal protein L23 NZD89_01810 PF00181 Ribosomal Proteins L2, RNA binding domain NZD89_01810 PF03947 Ribosomal Proteins L2, C-terminal domain NZD89_01815 PF00203 Ribosomal protein S19 NZD89_01820 PF00237 Ribosomal protein L22p/L17e NZD89_01825 PF07650 KH domain NZD89_01825 PF00189 Ribosomal protein S3, C-terminal domain NZD89_01830 PF00252 Ribosomal protein L16p/L10e NZD89_01835 PF00831 Ribosomal L29 protein NZD89_01840 PF00366 Ribosomal protein S17 NZD89_01845 PF00238 Ribosomal protein L14p/L23e NZD89_01850 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NZD89_01850 PF00467 KOW motif NZD89_01855 PF00673 ribosomal L5P family C-terminus NZD89_01855 PF00281 Ribosomal protein L5 NZD89_01860 PF00253 Ribosomal protein S14p/S29e NZD89_01865 PF00410 Ribosomal protein S8 NZD89_01870 PF00347 Ribosomal protein L6 NZD89_01875 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NZD89_01880 PF00333 Ribosomal protein S5, N-terminal domain NZD89_01880 PF03719 Ribosomal protein S5, C-terminal domain NZD89_01885 PF00327 Ribosomal protein L30p/L7e NZD89_01890 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NZD89_01895 PF00344 SecY translocase NZD89_01900 PF05191 Adenylate kinase, active site lid NZD89_01910 PF01176 Translation initiation factor 1A / IF-1 NZD89_01915 PF00444 Ribosomal protein L36 NZD89_01920 PF00416 Ribosomal protein S13/S18 NZD89_01925 PF00411 Ribosomal protein S11 NZD89_01930 PF00163 Ribosomal protein S4/S9 N-terminal domain NZD89_01930 PF01479 S4 domain NZD89_01935 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NZD89_01935 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NZD89_01935 PF01000 RNA polymerase Rpb3/RpoA insert domain NZD89_01940 PF01196 Ribosomal protein L17 NZD89_01945 PF01416 tRNA pseudouridine synthase NZD89_01950 PF00572 Ribosomal protein L13 NZD89_01955 PF00380 Ribosomal protein S9/S16 NZD89_01970 PF10609 NUBPL iron-transfer P-loop NTPase NZD89_01990 PF00491 Arginase family NZD89_02000 PF02457 DisA bacterial checkpoint controller nucleotide-binding NZD89_02010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NZD89_02010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NZD89_02010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NZD89_02010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NZD89_02015 PF01380 SIS domain NZD89_02025 PF01022 Bacterial regulatory protein, arsR family NZD89_02050 PF00005 ABC transporter NZD89_02050 PF13732 Domain of unknown function (DUF4162) NZD89_02060 PF03551 Transcriptional regulator PadR-like family NZD89_02080 PF00011 Hsp20/alpha crystallin family NZD89_02085 PF03551 Transcriptional regulator PadR-like family NZD89_02100 PF08281 Sigma-70, region 4 NZD89_02100 PF04542 Sigma-70 region 2 NZD89_02140 PF03551 Transcriptional regulator PadR-like family NZD89_02190 PF00313 'Cold-shock' DNA-binding domain NZD89_02200 PF10502 Signal peptidase, peptidase S26 NZD89_02230 PF03551 Transcriptional regulator PadR-like family NZD89_02245 PF04073 Aminoacyl-tRNA editing domain NZD89_02265 PF01381 Helix-turn-helix NZD89_02265 PF08671 Anti-repressor SinI NZD89_02280 PF01810 LysE type translocator NZD89_02285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_02285 PF03466 LysR substrate binding domain NZD89_02290 PF07690 Major Facilitator Superfamily NZD89_02295 PF00583 Acetyltransferase (GNAT) family NZD89_02300 PF02096 60Kd inner membrane protein NZD89_02300 PF14849 YidC periplasmic domain NZD89_02310 PF03551 Transcriptional regulator PadR-like family NZD89_02330 PF04229 GrpB protein NZD89_02330 PF13673 Acetyltransferase (GNAT) domain NZD89_02360 PF00583 Acetyltransferase (GNAT) family NZD89_02375 PF00583 Acetyltransferase (GNAT) family NZD89_02380 PF04229 GrpB protein NZD89_02380 PF13673 Acetyltransferase (GNAT) domain NZD89_02390 PF00583 Acetyltransferase (GNAT) family NZD89_02400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NZD89_02405 PF13302 Acetyltransferase (GNAT) domain NZD89_02415 PF00892 EamA-like transporter family NZD89_02475 PF02899 Phage integrase, N-terminal SAM-like domain NZD89_02475 PF00589 Phage integrase family NZD89_02485 PF08721 TnsA endonuclease C terminal NZD89_02485 PF08722 TnsA endonuclease N terminal NZD89_02490 PF00665 Integrase core domain NZD89_02495 PF11426 Tn7 transposition regulator TnsC NZD89_02495 PF13401 AAA domain NZD89_02525 PF09335 SNARE associated Golgi protein NZD89_02535 PF02583 Metal-sensitive transcriptional repressor NZD89_02540 PF00403 Heavy-metal-associated domain NZD89_02555 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_02555 PF00403 Heavy-metal-associated domain NZD89_02555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NZD89_02560 PF13419 Haloacid dehalogenase-like hydrolase NZD89_02600 PF00324 Amino acid permease NZD89_02605 PF01636 Phosphotransferase enzyme family NZD89_02610 PF01636 Phosphotransferase enzyme family NZD89_02620 PF00535 Glycosyl transferase family 2 NZD89_02655 PF13545 Crp-like helix-turn-helix domain NZD89_02655 PF00027 Cyclic nucleotide-binding domain NZD89_02665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NZD89_02665 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_02670 PF01252 Signal peptidase (SPase) II NZD89_02685 PF01638 HxlR-like helix-turn-helix NZD89_02690 PF00106 short chain dehydrogenase NZD89_02695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NZD89_02695 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_02715 PF00892 EamA-like transporter family NZD89_02720 PF00106 short chain dehydrogenase NZD89_02730 PF13686 DsrE/DsrF/DrsH-like family NZD89_02735 PF00581 Rhodanese-like domain NZD89_02735 PF01206 Sulfurtransferase TusA NZD89_02740 PF00581 Rhodanese-like domain NZD89_02740 PF00753 Metallo-beta-lactamase superfamily NZD89_02745 PF01925 Sulfite exporter TauE/SafE NZD89_02750 PF00581 Rhodanese-like domain NZD89_02755 PF02583 Metal-sensitive transcriptional repressor NZD89_02760 PF00085 Thioredoxin NZD89_02770 PF01209 ubiE/COQ5 methyltransferase family NZD89_02785 PF08019 Phosphoethanolamine transferase EptA/EptB NZD89_02785 PF00884 Sulfatase NZD89_02815 PF00291 Pyridoxal-phosphate dependent enzyme NZD89_02820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_02830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_02835 PF00248 Aldo/keto reductase family NZD89_02840 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NZD89_02885 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NZD89_02885 PF00391 PEP-utilising enzyme, mobile domain NZD89_02915 PF07690 Major Facilitator Superfamily NZD89_02920 PF01906 Putative heavy-metal-binding NZD89_02930 PF01566 Natural resistance-associated macrophage protein NZD89_02935 PF01566 Natural resistance-associated macrophage protein NZD89_02950 PF02308 MgtC family NZD89_02990 PF00005 ABC transporter NZD89_02995 PF12679 ABC-2 family transporter protein NZD89_03000 PF00654 Voltage gated chloride channel NZD89_03005 PF08220 DeoR-like helix-turn-helix domain NZD89_03005 PF00455 DeoR C terminal sensor domain NZD89_03030 PF02659 Putative manganese efflux pump NZD89_03040 PF00072 Response regulator receiver domain NZD89_03040 PF00486 Transcriptional regulatory protein, C terminal NZD89_03045 PF00672 HAMP domain NZD89_03045 PF00512 His Kinase A (phospho-acceptor) domain NZD89_03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_03055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_03085 PF02308 MgtC family NZD89_03100 PF01566 Natural resistance-associated macrophage protein NZD89_03105 PF01566 Natural resistance-associated macrophage protein NZD89_03115 PF01906 Putative heavy-metal-binding NZD89_03120 PF07690 Major Facilitator Superfamily NZD89_03155 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NZD89_03155 PF00391 PEP-utilising enzyme, mobile domain NZD89_03165 PF01810 LysE type translocator NZD89_03170 PF03824 High-affinity nickel-transport protein NZD89_03175 PF00083 Sugar (and other) transporter NZD89_03205 PF03551 Transcriptional regulator PadR-like family NZD89_03285 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_03290 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_03295 PF13378 Enolase C-terminal domain-like NZD89_03295 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NZD89_03300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_03300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_03320 PF01522 Polysaccharide deacetylase NZD89_03325 PF01475 Ferric uptake regulator family NZD89_03330 PF00578 AhpC/TSA family NZD89_03335 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_03335 PF13192 Thioredoxin domain NZD89_03340 PF01609 Transposase DDE domain NZD89_03365 PF00067 Cytochrome P450 NZD89_03375 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_03380 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_03390 PF00171 Aldehyde dehydrogenase family NZD89_03395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NZD89_03400 PF07729 FCD domain NZD89_03400 PF00392 Bacterial regulatory proteins, gntR family NZD89_03420 PF08450 SMP-30/Gluconolactonase/LRE-like region NZD89_03425 PF03786 D-mannonate dehydratase (UxuA) NZD89_03430 PF07729 FCD domain NZD89_03430 PF00392 Bacterial regulatory proteins, gntR family NZD89_03435 PF00892 EamA-like transporter family NZD89_03440 PF13520 Amino acid permease NZD89_03445 PF03323 Bacillus/Clostridium GerA spore germination protein NZD89_03470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_03470 PF03466 LysR substrate binding domain NZD89_03475 PF08241 Methyltransferase domain NZD89_03490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NZD89_03490 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NZD89_03505 PF01380 SIS domain NZD89_03510 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NZD89_03515 PF01638 HxlR-like helix-turn-helix NZD89_03535 PF04294 VanW like protein NZD89_03540 PF00072 Response regulator receiver domain NZD89_03540 PF00486 Transcriptional regulatory protein, C terminal NZD89_03545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_03545 PF00512 His Kinase A (phospho-acceptor) domain NZD89_03550 PF00512 His Kinase A (phospho-acceptor) domain NZD89_03550 PF00989 PAS fold NZD89_03550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_03550 PF00672 HAMP domain NZD89_03550 PF18698 Histidine kinase sensor domain NZD89_03560 PF02378 Phosphotransferase system, EIIC NZD89_03560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NZD89_03565 PF08279 HTH domain NZD89_03565 PF05043 Mga helix-turn-helix domain NZD89_03565 PF00874 PRD domain NZD89_03565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NZD89_03570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NZD89_03575 PF01232 Mannitol dehydrogenase Rossmann domain NZD89_03575 PF08125 Mannitol dehydrogenase C-terminal domain NZD89_03580 PF00381 PTS HPr component phosphorylation site NZD89_03735 PF05257 CHAP domain NZD89_03735 PF01476 LysM domain NZD89_03740 PF00291 Pyridoxal-phosphate dependent enzyme NZD89_03745 PF02833 DHHA2 domain NZD89_03745 PF01368 DHH family NZD89_03765 PF02073 Thermophilic metalloprotease (M29) NZD89_03770 PF09962 Uncharacterized conserved protein (DUF2196) NZD89_03775 PF00005 ABC transporter NZD89_03775 PF12848 ABC transporter NZD89_03785 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_03790 PF01068 ATP dependent DNA ligase domain NZD89_03800 PF01738 Dienelactone hydrolase family NZD89_03805 PF13180 PDZ domain NZD89_03810 PF07690 Major Facilitator Superfamily NZD89_03820 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) NZD89_03835 PF07690 Major Facilitator Superfamily NZD89_03840 PF13193 AMP-binding enzyme C-terminal domain NZD89_03840 PF00501 AMP-binding enzyme NZD89_03855 PF00753 Metallo-beta-lactamase superfamily NZD89_03860 PF00392 Bacterial regulatory proteins, gntR family NZD89_03860 PF07702 UTRA domain NZD89_03865 PF00324 Amino acid permease NZD89_03885 PF00324 Amino acid permease NZD89_03890 PF01865 Protein of unknown function DUF47 NZD89_03895 PF01384 Phosphate transporter family NZD89_03900 PF00356 Bacterial regulatory proteins, lacI family NZD89_03905 PF00232 Glycosyl hydrolase family 1 NZD89_03910 PF07662 Na+ dependent nucleoside transporter C-terminus NZD89_03910 PF01773 Na+ dependent nucleoside transporter N-terminus NZD89_03925 PF00625 Guanylate kinase NZD89_03930 PF03475 3-alpha domain NZD89_03930 PF03473 MOSC domain NZD89_03935 PF00849 RNA pseudouridylate synthase NZD89_03935 PF01479 S4 domain NZD89_03940 PF01209 ubiE/COQ5 methyltransferase family NZD89_03950 PF03109 ABC1 family NZD89_03955 PF02567 Phenazine biosynthesis-like protein NZD89_04030 PF03167 Uracil DNA glycosylase superfamily NZD89_04035 PF00120 Glutamine synthetase, catalytic domain NZD89_04035 PF03951 Glutamine synthetase, beta-Grasp domain NZD89_04045 PF03807 NADP oxidoreductase coenzyme F420-dependent NZD89_04045 PF14748 Pyrroline-5-carboxylate reductase dimerisation NZD89_04050 PF00994 Probable molybdopterin binding domain NZD89_04055 PF01738 Dienelactone hydrolase family NZD89_04070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NZD89_04070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NZD89_04070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NZD89_04070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NZD89_04075 PF07690 Major Facilitator Superfamily NZD89_04085 PF03808 Glycosyl transferase WecB/TagA/CpsF family NZD89_04090 PF00438 S-adenosylmethionine synthetase, N-terminal domain NZD89_04090 PF02773 S-adenosylmethionine synthetase, C-terminal domain NZD89_04090 PF02772 S-adenosylmethionine synthetase, central domain NZD89_04095 PF00196 Bacterial regulatory proteins, luxR family NZD89_04095 PF00072 Response regulator receiver domain NZD89_04110 PF00072 Response regulator receiver domain NZD89_04110 PF00486 Transcriptional regulatory protein, C terminal NZD89_04115 PF00512 His Kinase A (phospho-acceptor) domain NZD89_04115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_04115 PF00989 PAS fold NZD89_04115 PF16736 Single Cache-like NZD89_04130 PF04539 Sigma-70 region 3 NZD89_04130 PF04545 Sigma-70, region 4 NZD89_04130 PF04542 Sigma-70 region 2 NZD89_04140 PF01209 ubiE/COQ5 methyltransferase family NZD89_04145 PF04542 Sigma-70 region 2 NZD89_04145 PF04539 Sigma-70 region 3 NZD89_04145 PF04545 Sigma-70, region 4 NZD89_04180 PF13181 Tetratricopeptide repeat NZD89_04180 PF00535 Glycosyl transferase family 2 NZD89_04195 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NZD89_04195 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NZD89_04200 PF07517 SecA DEAD-like domain NZD89_04200 PF01043 SecA preprotein cross-linking domain NZD89_04200 PF07516 SecA Wing and Scaffold domain NZD89_04215 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NZD89_04215 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NZD89_04220 PF04199 Putative cyclase NZD89_04250 PF00672 HAMP domain NZD89_04250 PF17202 Single cache domain 3 NZD89_04250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NZD89_04275 PF00042 Globin NZD89_04275 PF00970 Oxidoreductase FAD-binding domain NZD89_04275 PF00175 Oxidoreductase NAD-binding domain NZD89_04285 PF01566 Natural resistance-associated macrophage protein NZD89_04310 PF02742 Iron dependent repressor, metal binding and dimerisation domain NZD89_04310 PF01325 Iron dependent repressor, N-terminal DNA binding domain NZD89_04315 PF01566 Natural resistance-associated macrophage protein NZD89_04335 PF00149 Calcineurin-like phosphoesterase NZD89_04350 PF01022 Bacterial regulatory protein, arsR family NZD89_04360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_04365 PF02743 Cache domain NZD89_04365 PF00672 HAMP domain NZD89_04365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NZD89_04375 PF02325 YGGT family NZD89_04390 PF03466 LysR substrate binding domain NZD89_04390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_04400 PF04055 Radical SAM superfamily NZD89_04410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_04410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_04415 PF01261 Xylose isomerase-like TIM barrel NZD89_04420 PF01261 Xylose isomerase-like TIM barrel NZD89_04420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NZD89_04425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_04425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_04430 PF07690 Major Facilitator Superfamily NZD89_04435 PF00356 Bacterial regulatory proteins, lacI family NZD89_04440 PF00440 Bacterial regulatory proteins, tetR family NZD89_04450 PF13243 Squalene-hopene cyclase C-terminal domain NZD89_04450 PF13249 Squalene-hopene cyclase N-terminal domain NZD89_04465 PF00356 Bacterial regulatory proteins, lacI family NZD89_04470 PF00107 Zinc-binding dehydrogenase NZD89_04470 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_04475 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NZD89_04490 PF00083 Sugar (and other) transporter NZD89_04495 PF01047 MarR family NZD89_04500 PF00326 Prolyl oligopeptidase family NZD89_04505 PF00171 Aldehyde dehydrogenase family NZD89_04510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NZD89_04515 PF00892 EamA-like transporter family NZD89_04520 PF07969 Amidohydrolase family NZD89_04525 PF00989 PAS fold NZD89_04525 PF00512 His Kinase A (phospho-acceptor) domain NZD89_04525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_04525 PF13188 PAS domain NZD89_04525 PF13426 PAS domain NZD89_04530 PF00501 AMP-binding enzyme NZD89_04530 PF01553 Acyltransferase NZD89_04540 PF01546 Peptidase family M20/M25/M40 NZD89_04540 PF07687 Peptidase dimerisation domain NZD89_04545 PF00085 Thioredoxin NZD89_04550 PF03466 LysR substrate binding domain NZD89_04550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_04555 PF00271 Helicase conserved C-terminal domain NZD89_04555 PF09382 RQC domain NZD89_04555 PF16124 RecQ zinc-binding NZD89_04555 PF00270 DEAD/DEAH box helicase NZD89_04555 PF00570 HRDC domain NZD89_04570 PF02659 Putative manganese efflux pump NZD89_04590 PF13426 PAS domain NZD89_04590 PF13188 PAS domain NZD89_04590 PF00989 PAS fold NZD89_04590 PF00512 His Kinase A (phospho-acceptor) domain NZD89_04590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_04600 PF10431 C-terminal, D2-small domain, of ClpB protein NZD89_04600 PF17871 AAA lid domain NZD89_04600 PF07724 AAA domain (Cdc48 subfamily) NZD89_04600 PF00004 ATPase family associated with various cellular activities (AAA) NZD89_04610 PF03450 CO dehydrogenase flavoprotein C-terminal domain NZD89_04610 PF00941 FAD binding domain in molybdopterin dehydrogenase NZD89_04615 PF00111 2Fe-2S iron-sulfur cluster binding domain NZD89_04615 PF01799 [2Fe-2S] binding domain NZD89_04620 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NZD89_04620 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NZD89_04625 PF02625 XdhC and CoxI family NZD89_04625 PF13478 XdhC Rossmann domain NZD89_04630 PF12804 MobA-like NTP transferase domain NZD89_04635 PF07690 Major Facilitator Superfamily NZD89_04645 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NZD89_04645 PF02779 Transketolase, pyrimidine binding domain NZD89_04645 PF02780 Transketolase, C-terminal domain NZD89_04650 PF01070 FMN-dependent dehydrogenase NZD89_04655 PF06463 Molybdenum Cofactor Synthesis C NZD89_04655 PF04055 Radical SAM superfamily NZD89_04665 PF01370 NAD dependent epimerase/dehydratase family NZD89_04670 PF13249 Squalene-hopene cyclase N-terminal domain NZD89_04670 PF13243 Squalene-hopene cyclase C-terminal domain NZD89_04685 PF01593 Flavin containing amine oxidoreductase NZD89_04695 PF07690 Major Facilitator Superfamily NZD89_04700 PF00535 Glycosyl transferase family 2 NZD89_04705 PF01432 Peptidase family M3 NZD89_04715 PF08439 Oligopeptidase F NZD89_04715 PF01432 Peptidase family M3 NZD89_04720 PF01212 Beta-eliminating lyase NZD89_04725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NZD89_04725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NZD89_04755 PF01476 LysM domain NZD89_04755 PF03734 L,D-transpeptidase catalytic domain NZD89_04765 PF00266 Aminotransferase class-V NZD89_04775 PF07690 Major Facilitator Superfamily NZD89_04780 PF03358 NADPH-dependent FMN reductase NZD89_04790 PF00476 DNA polymerase family A NZD89_04790 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NZD89_04790 PF01367 5'-3' exonuclease, C-terminal SAM fold NZD89_04795 PF10414 Sirohaem synthase dimerisation region NZD89_04795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NZD89_04800 PF01507 Phosphoadenosine phosphosulfate reductase family NZD89_04805 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NZD89_04805 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NZD89_04810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NZD89_04815 PF01903 CbiX NZD89_04820 PF01521 Iron-sulphur cluster biosynthesis NZD89_04830 PF13673 Acetyltransferase (GNAT) domain NZD89_04830 PF04229 GrpB protein NZD89_04835 PF01842 ACT domain NZD89_04835 PF00551 Formyl transferase NZD89_04850 PF00248 Aldo/keto reductase family NZD89_04855 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NZD89_04855 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NZD89_04855 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NZD89_04865 PF01966 HD domain NZD89_04870 PF02272 DHHA1 domain NZD89_04870 PF01411 tRNA synthetases class II (A) NZD89_04870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NZD89_04875 PF02801 Beta-ketoacyl synthase, C-terminal domain NZD89_04875 PF00109 Beta-ketoacyl synthase, N-terminal domain NZD89_04895 PF13243 Squalene-hopene cyclase C-terminal domain NZD89_04895 PF13249 Squalene-hopene cyclase N-terminal domain NZD89_04900 PF10720 Protein of unknown function (DUF2515) NZD89_04905 PF13302 Acetyltransferase (GNAT) domain NZD89_04915 PF00793 DAHP synthetase I family NZD89_04915 PF18152 DAHP synthase ferredoxin-like domain NZD89_04920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NZD89_04920 PF02770 Acyl-CoA dehydrogenase, middle domain NZD89_04920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NZD89_04925 PF13193 AMP-binding enzyme C-terminal domain NZD89_04925 PF00501 AMP-binding enzyme NZD89_04930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NZD89_04930 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_04940 PF00550 Phosphopantetheine attachment site NZD89_04945 PF00501 AMP-binding enzyme NZD89_04945 PF13193 AMP-binding enzyme C-terminal domain NZD89_04950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NZD89_04950 PF02770 Acyl-CoA dehydrogenase, middle domain NZD89_04950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NZD89_04955 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_04955 PF16912 Glucose dehydrogenase C-terminus NZD89_04965 PF00005 ABC transporter NZD89_04965 PF00571 CBS domain NZD89_04970 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_04975 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NZD89_04990 PF03129 Anticodon binding domain NZD89_04990 PF09180 Prolyl-tRNA synthetase, C-terminal NZD89_04990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NZD89_05005 PF00589 Phage integrase family NZD89_05005 PF14659 Phage integrase, N-terminal SAM-like domain NZD89_05030 PF01381 Helix-turn-helix NZD89_05035 PF01381 Helix-turn-helix NZD89_05085 PF10548 P22AR C-terminal domain NZD89_05085 PF02498 BRO family, N-terminal domain NZD89_05115 PF10668 Phage terminase small subunit NZD89_05125 PF00313 'Cold-shock' DNA-binding domain NZD89_05130 PF00487 Fatty acid desaturase NZD89_05160 PF03354 Phage Terminase NZD89_05165 PF04860 Phage portal protein NZD89_05170 PF00574 Clp protease NZD89_05295 PF02796 Helix-turn-helix domain of resolvase NZD89_05295 PF00665 Integrase core domain NZD89_05300 PF01695 IstB-like ATP binding protein NZD89_05305 PF01548 Transposase NZD89_05305 PF02371 Transposase IS116/IS110/IS902 family NZD89_05325 PF00561 alpha/beta hydrolase fold NZD89_05335 PF00196 Bacterial regulatory proteins, luxR family NZD89_05335 PF00072 Response regulator receiver domain NZD89_05365 PF01371 Trp repressor protein NZD89_05370 PF06018 CodY GAF-like domain NZD89_05370 PF08222 CodY helix-turn-helix domain NZD89_05375 PF01546 Peptidase family M20/M25/M40 NZD89_05375 PF07687 Peptidase dimerisation domain NZD89_05380 PF00132 Bacterial transferase hexapeptide (six repeats) NZD89_05385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NZD89_05385 PF01872 RibD C-terminal domain NZD89_05390 PF00677 Lumazine binding domain NZD89_05395 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NZD89_05395 PF00925 GTP cyclohydrolase II NZD89_05400 PF00885 6,7-dimethyl-8-ribityllumazine synthase NZD89_05405 PF00561 alpha/beta hydrolase fold NZD89_05410 PF01541 GIY-YIG catalytic domain NZD89_05420 PF01145 SPFH domain / Band 7 family NZD89_05435 PF00133 tRNA synthetases class I (I, L, M and V) NZD89_05435 PF08264 Anticodon-binding domain of tRNA NZD89_05445 PF06508 Queuosine biosynthesis protein QueC NZD89_05455 PF01152 Bacterial-like globin NZD89_05460 PF06133 Control of competence regulator ComK, YlbF/YmcA NZD89_05465 PF12706 Beta-lactamase superfamily domain NZD89_05470 PF11588 Protein of unknown function (DUF3243) NZD89_05480 PF00817 impB/mucB/samB family NZD89_05480 PF11799 impB/mucB/samB family C-terminal domain NZD89_05480 PF11798 IMS family HHH motif NZD89_05485 PF01316 Arginine repressor, DNA binding domain NZD89_05485 PF02863 Arginine repressor, C-terminal domain NZD89_05490 PF00291 Pyridoxal-phosphate dependent enzyme NZD89_05510 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NZD89_05510 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NZD89_05515 PF07085 DRTGG domain NZD89_05515 PF00392 Bacterial regulatory proteins, gntR family NZD89_05515 PF00571 CBS domain NZD89_05515 PF03061 Thioesterase superfamily NZD89_05520 PF07733 Bacterial DNA polymerase III alpha NTPase domain NZD89_05520 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NZD89_05520 PF14579 Helix-hairpin-helix motif NZD89_05520 PF02811 PHP domain NZD89_05520 PF01336 OB-fold nucleic acid binding domain NZD89_05525 PF04608 Phosphatidylglycerophosphatase A NZD89_05535 PF17848 Acetyl-coA carboxylase zinc finger domain NZD89_05535 PF01039 Carboxyl transferase domain NZD89_05540 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NZD89_05545 PF00224 Pyruvate kinase, barrel domain NZD89_05545 PF00391 PEP-utilising enzyme, mobile domain NZD89_05545 PF02887 Pyruvate kinase, alpha/beta domain NZD89_05550 PF00326 Prolyl oligopeptidase family NZD89_05555 PF00579 tRNA synthetases class I (W and Y) NZD89_05560 PF00072 Response regulator receiver domain NZD89_05560 PF00486 Transcriptional regulatory protein, C terminal NZD89_05570 PF00180 Isocitrate/isopropylmalate dehydrogenase NZD89_05575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NZD89_05575 PF00056 lactate/malate dehydrogenase, NAD binding domain NZD89_05580 PF01367 5'-3' exonuclease, C-terminal SAM fold NZD89_05580 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NZD89_05580 PF00476 DNA polymerase family A NZD89_05585 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NZD89_05585 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NZD89_05585 PF06827 Zinc finger found in FPG and IleRS NZD89_05590 PF01121 Dephospho-CoA kinase NZD89_05595 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NZD89_05595 PF01464 Transglycosylase SLT domain NZD89_05620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NZD89_05630 PF04239 Protein of unknown function (DUF421) NZD89_05660 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NZD89_05665 PF01380 SIS domain NZD89_05675 PF01548 Transposase NZD89_05675 PF02371 Transposase IS116/IS110/IS902 family NZD89_05685 PF01654 Cytochrome bd terminal oxidase subunit I NZD89_05690 PF02322 Cytochrome bd terminal oxidase subunit II NZD89_05695 PF07301 Protein of unknown function (DUF1453) NZD89_05715 PF13610 DDE domain NZD89_05725 PF00005 ABC transporter NZD89_05725 PF00664 ABC transporter transmembrane region NZD89_05730 PF00664 ABC transporter transmembrane region NZD89_05730 PF00005 ABC transporter NZD89_05735 PF02322 Cytochrome bd terminal oxidase subunit II NZD89_05740 PF01654 Cytochrome bd terminal oxidase subunit I NZD89_05750 PF00795 Carbon-nitrogen hydrolase NZD89_05755 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NZD89_05755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NZD89_05760 PF01276 Orn/Lys/Arg decarboxylase, major domain NZD89_05760 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NZD89_05765 PF00392 Bacterial regulatory proteins, gntR family NZD89_05765 PF00155 Aminotransferase class I and II NZD89_05775 PF00905 Penicillin binding protein transpeptidase domain NZD89_05775 PF03717 Penicillin-binding Protein dimerisation domain NZD89_05780 PF00392 Bacterial regulatory proteins, gntR family NZD89_05780 PF07702 UTRA domain NZD89_05785 PF13378 Enolase C-terminal domain-like NZD89_05785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NZD89_05790 PF07690 Major Facilitator Superfamily NZD89_05805 PF00857 Isochorismatase family NZD89_05815 PF07690 Major Facilitator Superfamily NZD89_05820 PF09339 IclR helix-turn-helix domain NZD89_05820 PF01614 Bacterial transcriptional regulator NZD89_05830 PF13520 Amino acid permease NZD89_05835 PF00486 Transcriptional regulatory protein, C terminal NZD89_05835 PF00072 Response regulator receiver domain NZD89_05840 PF16736 Single Cache-like NZD89_05840 PF00989 PAS fold NZD89_05840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_05840 PF00512 His Kinase A (phospho-acceptor) domain NZD89_05845 PF10372 Bacterial membrane-spanning protein N-terminus NZD89_05845 PF02457 DisA bacterial checkpoint controller nucleotide-binding NZD89_05850 PF01325 Iron dependent repressor, N-terminal DNA binding domain NZD89_05850 PF00480 ROK family NZD89_05855 PF01261 Xylose isomerase-like TIM barrel NZD89_05860 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_05860 PF00107 Zinc-binding dehydrogenase NZD89_05870 PF02371 Transposase IS116/IS110/IS902 family NZD89_05870 PF01548 Transposase NZD89_05895 PF00392 Bacterial regulatory proteins, gntR family NZD89_05900 PF13416 Bacterial extracellular solute-binding protein NZD89_05905 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_05910 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_05935 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NZD89_05935 PF01476 LysM domain NZD89_05955 PF03466 LysR substrate binding domain NZD89_05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_05960 PF00561 alpha/beta hydrolase fold NZD89_05965 PF02817 e3 binding domain NZD89_05965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NZD89_05965 PF00364 Biotin-requiring enzyme NZD89_05970 PF01548 Transposase NZD89_05970 PF02371 Transposase IS116/IS110/IS902 family NZD89_05985 PF02899 Phage integrase, N-terminal SAM-like domain NZD89_05985 PF00589 Phage integrase family NZD89_05990 PF01548 Transposase NZD89_05990 PF02371 Transposase IS116/IS110/IS902 family NZD89_06060 PF13847 Methyltransferase domain NZD89_06065 PF07690 Major Facilitator Superfamily NZD89_06095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NZD89_06095 PF00205 Thiamine pyrophosphate enzyme, central domain NZD89_06095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NZD89_06105 PF01348 Type II intron maturase NZD89_06105 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NZD89_06150 PF00313 'Cold-shock' DNA-binding domain NZD89_06165 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_06165 PF00107 Zinc-binding dehydrogenase NZD89_06170 PF00216 Bacterial DNA-binding protein NZD89_06175 PF00313 'Cold-shock' DNA-binding domain NZD89_06180 PF00905 Penicillin binding protein transpeptidase domain NZD89_06180 PF03717 Penicillin-binding Protein dimerisation domain NZD89_06190 PF03060 Nitronate monooxygenase NZD89_06200 PF03186 CobD/Cbib protein NZD89_06205 PF00155 Aminotransferase class I and II NZD89_06215 PF00990 Diguanylate cyclase, GGDEF domain NZD89_06215 PF03707 Bacterial signalling protein N terminal repeat NZD89_06215 PF00563 EAL domain NZD89_06225 PF01595 Cyclin M transmembrane N-terminal domain NZD89_06225 PF03471 Transporter associated domain NZD89_06225 PF00571 CBS domain NZD89_06230 PF13193 AMP-binding enzyme C-terminal domain NZD89_06230 PF00501 AMP-binding enzyme NZD89_06240 PF00072 Response regulator receiver domain NZD89_06240 PF01966 HD domain NZD89_06255 PF01915 Glycosyl hydrolase family 3 C-terminal domain NZD89_06255 PF14310 Fibronectin type III-like domain NZD89_06255 PF00933 Glycosyl hydrolase family 3 N terminal domain NZD89_06260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NZD89_06260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NZD89_06270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_06270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_06275 PF00480 ROK family NZD89_06275 PF01047 MarR family NZD89_06280 PF02837 Glycosyl hydrolases family 2, sugar binding domain NZD89_06280 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NZD89_06280 PF16353 Domain of unknown function(DUF4981) NZD89_06280 PF00703 Glycosyl hydrolases family 2 NZD89_06280 PF02929 Beta galactosidase small chain NZD89_06295 PF01979 Amidohydrolase family NZD89_06300 PF07687 Peptidase dimerisation domain NZD89_06300 PF01546 Peptidase family M20/M25/M40 NZD89_06315 PF00356 Bacterial regulatory proteins, lacI family NZD89_06315 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NZD89_06325 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NZD89_06330 PF03812 2-keto-3-deoxygluconate permease NZD89_06335 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_06340 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_06350 PF01261 Xylose isomerase-like TIM barrel NZD89_06355 PF10518 TAT (twin-arginine translocation) pathway signal sequence NZD89_06355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_06370 PF01869 BadF/BadG/BcrA/BcrD ATPase family NZD89_06375 PF00144 Beta-lactamase NZD89_06380 PF13580 SIS domain NZD89_06385 PF07075 Protein of unknown function (DUF1343) NZD89_06390 PF01418 Helix-turn-helix domain, rpiR family NZD89_06390 PF01380 SIS domain NZD89_06395 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_06400 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_06405 PF13416 Bacterial extracellular solute-binding protein NZD89_06415 PF02913 FAD linked oxidases, C-terminal domain NZD89_06415 PF01565 FAD binding domain NZD89_06420 PF02754 Cysteine-rich domain NZD89_06420 PF13183 4Fe-4S dicluster domain NZD89_06450 PF00480 ROK family NZD89_06450 PF01047 MarR family NZD89_06460 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_06465 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_06470 PF00480 ROK family NZD89_06480 PF04041 beta-1,4-mannooligosaccharide phosphorylase NZD89_06485 PF01238 Phosphomannose isomerase type I NZD89_06495 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_06495 PF00107 Zinc-binding dehydrogenase NZD89_06505 PF07690 Major Facilitator Superfamily NZD89_06520 PF06039 Malate:quinone oxidoreductase (Mqo) NZD89_06525 PF07702 UTRA domain NZD89_06525 PF00392 Bacterial regulatory proteins, gntR family NZD89_06530 PF11975 Family 4 glycosyl hydrolase C-terminal domain NZD89_06530 PF02056 Family 4 glycosyl hydrolase NZD89_06535 PF01116 Fructose-bisphosphate aldolase class-II NZD89_06540 PF00392 Bacterial regulatory proteins, gntR family NZD89_06540 PF07702 UTRA domain NZD89_06545 PF00171 Aldehyde dehydrogenase family NZD89_06550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NZD89_06550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NZD89_06555 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NZD89_06555 PF13378 Enolase C-terminal domain-like NZD89_06560 PF07690 Major Facilitator Superfamily NZD89_06575 PF07690 Major Facilitator Superfamily NZD89_06585 PF13610 DDE domain NZD89_06590 PF03812 2-keto-3-deoxygluconate permease NZD89_06595 PF13378 Enolase C-terminal domain-like NZD89_06600 PF00390 Malic enzyme, N-terminal domain NZD89_06600 PF03949 Malic enzyme, NAD binding domain NZD89_06605 PF03466 LysR substrate binding domain NZD89_06605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_06610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NZD89_06610 PF01842 ACT domain NZD89_06610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NZD89_06615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_06615 PF03466 LysR substrate binding domain NZD89_06620 PF07690 Major Facilitator Superfamily NZD89_06625 PF03737 Aldolase/RraA NZD89_06625 PF00180 Isocitrate/isopropylmalate dehydrogenase NZD89_06630 PF03737 Aldolase/RraA NZD89_06660 PF02371 Transposase IS116/IS110/IS902 family NZD89_06660 PF01548 Transposase NZD89_06670 PF00158 Sigma-54 interaction domain NZD89_06670 PF13426 PAS domain NZD89_06670 PF02954 Bacterial regulatory protein, Fis family NZD89_06690 PF02371 Transposase IS116/IS110/IS902 family NZD89_06690 PF01548 Transposase NZD89_06700 PF00723 Glycosyl hydrolases family 15 NZD89_06700 PF09137 Glucodextranase, domain N NZD89_06705 PF00343 Carbohydrate phosphorylase NZD89_06705 PF11897 Protein of unknown function (DUF3417) NZD89_06715 PF00343 Carbohydrate phosphorylase NZD89_06715 PF11897 Protein of unknown function (DUF3417) NZD89_06725 PF03065 Glycosyl hydrolase family 57 NZD89_06725 PF09210 Domain of unknown function (DUF1957) NZD89_06730 PF00483 Nucleotidyl transferase NZD89_06740 PF00483 Nucleotidyl transferase NZD89_06750 PF17853 GGDEF-like domain NZD89_06750 PF13556 PucR C-terminal helix-turn-helix domain NZD89_06750 PF07905 Purine catabolism regulatory protein-like family NZD89_06755 PF07690 Major Facilitator Superfamily NZD89_06760 PF01546 Peptidase family M20/M25/M40 NZD89_06760 PF07687 Peptidase dimerisation domain NZD89_06765 PF01979 Amidohydrolase family NZD89_06770 PF00970 Oxidoreductase FAD-binding domain NZD89_06770 PF00175 Oxidoreductase NAD-binding domain NZD89_06770 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NZD89_06775 PF01180 Dihydroorotate dehydrogenase NZD89_06780 PF02423 Ornithine cyclodeaminase/mu-crystallin family NZD89_06810 PF13426 PAS domain NZD89_06810 PF02954 Bacterial regulatory protein, Fis family NZD89_06810 PF00158 Sigma-54 interaction domain NZD89_06815 PF03812 2-keto-3-deoxygluconate permease NZD89_06820 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NZD89_06825 PF02397 Bacterial sugar transferase NZD89_06850 PF01547 Bacterial extracellular solute-binding protein NZD89_06855 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_06860 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_06880 PF00483 Nucleotidyl transferase NZD89_06880 PF01050 Mannose-6-phosphate isomerase NZD89_06885 PF00483 Nucleotidyl transferase NZD89_06890 PF02397 Bacterial sugar transferase NZD89_06905 PF00440 Bacterial regulatory proteins, tetR family NZD89_06905 PF17934 Tetracyclin repressor-like, C-terminal domain NZD89_06910 PF00884 Sulfatase NZD89_06910 PF16347 Domain of unknown function (DUF4976) NZD89_06915 PF03781 Sulfatase-modifying factor enzyme 1 NZD89_06925 PF00884 Sulfatase NZD89_06935 PF00474 Sodium:solute symporter family NZD89_06965 PF00188 Cysteine-rich secretory protein family NZD89_06970 PF00563 EAL domain NZD89_06970 PF13188 PAS domain NZD89_06970 PF03707 Bacterial signalling protein N terminal repeat NZD89_06970 PF00990 Diguanylate cyclase, GGDEF domain NZD89_06980 PF01022 Bacterial regulatory protein, arsR family NZD89_06990 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NZD89_07005 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_07010 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_07015 PF02311 AraC-like ligand binding domain NZD89_07015 PF12833 Helix-turn-helix domain NZD89_07020 PF05721 Phytanoyl-CoA dioxygenase (PhyH) NZD89_07035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_07035 PF01751 Toprim domain NZD89_07035 PF00986 DNA gyrase B subunit, carboxyl terminus NZD89_07035 PF00204 DNA gyrase B NZD89_07040 PF00521 DNA gyrase/topoisomerase IV, subunit A NZD89_07040 PF03989 DNA gyrase C-terminal domain, beta-propeller NZD89_07045 PF00920 Dehydratase family NZD89_07050 PF07729 FCD domain NZD89_07050 PF00392 Bacterial regulatory proteins, gntR family NZD89_07060 PF00171 Aldehyde dehydrogenase family NZD89_07065 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NZD89_07065 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NZD89_07095 PF13416 Bacterial extracellular solute-binding protein NZD89_07100 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_07105 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_07110 PF01869 BadF/BadG/BcrA/BcrD ATPase family NZD89_07115 PF02056 Family 4 glycosyl hydrolase NZD89_07115 PF11975 Family 4 glycosyl hydrolase C-terminal domain NZD89_07130 PF11975 Family 4 glycosyl hydrolase C-terminal domain NZD89_07130 PF02056 Family 4 glycosyl hydrolase NZD89_07145 PF01548 Transposase NZD89_07145 PF02371 Transposase IS116/IS110/IS902 family NZD89_07150 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NZD89_07150 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NZD89_07155 PF00355 Rieske [2Fe-2S] domain NZD89_07160 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_07160 PF00107 Zinc-binding dehydrogenase NZD89_07165 PF03466 LysR substrate binding domain NZD89_07165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_07175 PF07690 Major Facilitator Superfamily NZD89_07185 PF07883 Cupin domain NZD89_07190 PF01557 Fumarylacetoacetate (FAA) hydrolase family NZD89_07200 PF01494 FAD binding domain NZD89_07210 PF07690 Major Facilitator Superfamily NZD89_07215 PF00596 Class II Aldolase and Adducin N-terminal domain NZD89_07220 PF00083 Sugar (and other) transporter NZD89_07225 PF03466 LysR substrate binding domain NZD89_07225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_07230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_07230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_07235 PF00355 Rieske [2Fe-2S] domain NZD89_07245 PF00696 Amino acid kinase family NZD89_07245 PF01472 PUA domain NZD89_07250 PF00171 Aldehyde dehydrogenase family NZD89_07255 PF07690 Major Facilitator Superfamily NZD89_07260 PF01965 DJ-1/PfpI family NZD89_07260 PF12833 Helix-turn-helix domain NZD89_07265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_07265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_07280 PF02595 Glycerate kinase family NZD89_07295 PF00180 Isocitrate/isopropylmalate dehydrogenase NZD89_07300 PF00392 Bacterial regulatory proteins, gntR family NZD89_07305 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NZD89_07315 PF02610 L-arabinose isomerase NZD89_07315 PF11762 L-arabinose isomerase C-terminal domain NZD89_07320 PF00596 Class II Aldolase and Adducin N-terminal domain NZD89_07325 PF07944 Beta-L-arabinofuranosidase, GH127 NZD89_07330 PF13419 Haloacid dehalogenase-like hydrolase NZD89_07335 PF13685 Iron-containing alcohol dehydrogenase NZD89_07350 PF07690 Major Facilitator Superfamily NZD89_07355 PF07729 FCD domain NZD89_07355 PF00392 Bacterial regulatory proteins, gntR family NZD89_07360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_07365 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_07370 PF12911 N-terminal TM domain of oligopeptide transport permease C NZD89_07370 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_07375 PF06912 Protein of unknown function (DUF1275) NZD89_07380 PF01641 SelR domain NZD89_07385 PF00296 Luciferase-like monooxygenase NZD89_07415 PF12833 Helix-turn-helix domain NZD89_07415 PF10114 Sensory domain found in PocR NZD89_07420 PF00664 ABC transporter transmembrane region NZD89_07420 PF00005 ABC transporter NZD89_07425 PF00664 ABC transporter transmembrane region NZD89_07425 PF00005 ABC transporter NZD89_07430 PF00485 Phosphoribulokinase / Uridine kinase family NZD89_07435 PF04198 Putative sugar-binding domain NZD89_07440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NZD89_07440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NZD89_07445 PF00709 Adenylosuccinate synthetase NZD89_07450 PF03466 LysR substrate binding domain NZD89_07450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_07455 PF00486 Transcriptional regulatory protein, C terminal NZD89_07455 PF00072 Response regulator receiver domain NZD89_07460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_07460 PF00512 His Kinase A (phospho-acceptor) domain NZD89_07460 PF00989 PAS fold NZD89_07460 PF11808 Phosphate regulon sensor protein PhoR NZD89_07470 PF00672 HAMP domain NZD89_07470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_07470 PF18698 Histidine kinase sensor domain NZD89_07470 PF00512 His Kinase A (phospho-acceptor) domain NZD89_07475 PF00072 Response regulator receiver domain NZD89_07475 PF00486 Transcriptional regulatory protein, C terminal NZD89_07480 PF07690 Major Facilitator Superfamily NZD89_07485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_07485 PF00005 ABC transporter NZD89_07490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_07490 PF00005 ABC transporter NZD89_07495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_07500 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_07500 PF12911 N-terminal TM domain of oligopeptide transport permease C NZD89_07505 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_07510 PF00484 Carbonic anhydrase NZD89_07520 PF07690 Major Facilitator Superfamily NZD89_07530 PF03553 Na+/H+ antiporter family NZD89_07535 PF00664 ABC transporter transmembrane region NZD89_07535 PF00005 ABC transporter NZD89_07540 PF00005 ABC transporter NZD89_07540 PF00664 ABC transporter transmembrane region NZD89_07555 PF01476 LysM domain NZD89_07555 PF00704 Glycosyl hydrolases family 18 NZD89_07575 PF03814 Potassium-transporting ATPase A subunit NZD89_07585 PF02669 K+-transporting ATPase, c chain NZD89_07590 PF02702 Osmosensitive K+ channel His kinase sensor domain NZD89_07595 PF02702 Osmosensitive K+ channel His kinase sensor domain NZD89_07600 PF13492 GAF domain NZD89_07600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_07600 PF00512 His Kinase A (phospho-acceptor) domain NZD89_07600 PF13493 Domain of unknown function (DUF4118) NZD89_07600 PF02702 Osmosensitive K+ channel His kinase sensor domain NZD89_07605 PF00072 Response regulator receiver domain NZD89_07605 PF00486 Transcriptional regulatory protein, C terminal NZD89_07610 PF13520 Amino acid permease NZD89_07675 PF00269 Small, acid-soluble spore proteins, alpha/beta type NZD89_07710 PF03070 TENA/THI-4/PQQC family NZD89_07715 PF02581 Thiamine monophosphate synthase NZD89_07715 PF08543 Phosphomethylpyrimidine kinase NZD89_07720 PF02110 Hydroxyethylthiazole kinase family NZD89_07725 PF02581 Thiamine monophosphate synthase NZD89_07740 PF00175 Oxidoreductase NAD-binding domain NZD89_07740 PF00042 Globin NZD89_07740 PF00970 Oxidoreductase FAD-binding domain NZD89_07745 PF02082 Transcriptional regulator NZD89_07755 PF03061 Thioesterase superfamily NZD89_07760 PF03447 Homoserine dehydrogenase, NAD binding domain NZD89_07760 PF01842 ACT domain NZD89_07760 PF00742 Homoserine dehydrogenase NZD89_07765 PF01063 Amino-transferase class IV NZD89_07770 PF00920 Dehydratase family NZD89_07775 PF00205 Thiamine pyrophosphate enzyme, central domain NZD89_07775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NZD89_07775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NZD89_07780 PF01842 ACT domain NZD89_07780 PF10369 Small subunit of acetolactate synthase NZD89_07785 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NZD89_07785 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NZD89_07790 PF08502 LeuA allosteric (dimerisation) domain NZD89_07790 PF00682 HMGL-like NZD89_07795 PF00180 Isocitrate/isopropylmalate dehydrogenase NZD89_07800 PF00330 Aconitase family (aconitate hydratase) NZD89_07805 PF00694 Aconitase C-terminal domain NZD89_07810 PF02875 Mur ligase family, glutamate ligase domain NZD89_07810 PF08245 Mur ligase middle domain NZD89_07815 PF02659 Putative manganese efflux pump NZD89_07820 PF00285 Citrate synthase, C-terminal domain NZD89_07825 PF00269 Small, acid-soluble spore proteins, alpha/beta type NZD89_07835 PF00571 CBS domain NZD89_07855 PF00005 ABC transporter NZD89_07860 PF02687 FtsX-like permease family NZD89_07860 PF12704 MacB-like periplasmic core domain NZD89_07865 PF01435 Peptidase family M48 NZD89_07875 PF13439 Glycosyltransferase Family 4 NZD89_07875 PF00534 Glycosyl transferases group 1 NZD89_07885 PF02675 S-adenosylmethionine decarboxylase NZD89_07940 PF00561 alpha/beta hydrolase fold NZD89_07940 PF08386 TAP-like protein NZD89_07945 PF07690 Major Facilitator Superfamily NZD89_07960 PF03060 Nitronate monooxygenase NZD89_07975 PF00313 'Cold-shock' DNA-binding domain NZD89_07980 PF08279 HTH domain NZD89_07980 PF00571 CBS domain NZD89_07985 PF03618 Kinase/pyrophosphorylase NZD89_07990 PF00391 PEP-utilising enzyme, mobile domain NZD89_07990 PF02896 PEP-utilising enzyme, TIM barrel domain NZD89_07990 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NZD89_08000 PF02796 Helix-turn-helix domain of resolvase NZD89_08000 PF00239 Resolvase, N terminal domain NZD89_08025 PF01883 Iron-sulfur cluster assembly protein NZD89_08035 PF13380 CoA binding domain NZD89_08045 PF07690 Major Facilitator Superfamily NZD89_08065 PF00313 'Cold-shock' DNA-binding domain NZD89_08070 PF00269 Small, acid-soluble spore proteins, alpha/beta type NZD89_08080 PF04715 Anthranilate synthase component I, N terminal region NZD89_08080 PF00425 chorismate binding enzyme NZD89_08105 PF10437 Bacterial lipoate protein ligase C-terminus NZD89_08105 PF03099 Biotin/lipoate A/B protein ligase family NZD89_08130 PF00313 'Cold-shock' DNA-binding domain NZD89_08135 PF11553 Protein of unknown function (DUF3231) NZD89_08150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NZD89_08180 PF12805 FUSC-like inner membrane protein yccS NZD89_08195 PF03061 Thioesterase superfamily NZD89_08240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NZD89_08240 PF02824 TGS domain NZD89_08240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NZD89_08240 PF03129 Anticodon binding domain NZD89_08245 PF00440 Bacterial regulatory proteins, tetR family NZD89_08245 PF02909 Tetracyclin repressor-like, C-terminal domain NZD89_08260 PF18152 DAHP synthase ferredoxin-like domain NZD89_08260 PF00793 DAHP synthetase I family NZD89_08265 PF08502 LeuA allosteric (dimerisation) domain NZD89_08265 PF00682 HMGL-like NZD89_08275 PF07859 alpha/beta hydrolase fold NZD89_08280 PF13732 Domain of unknown function (DUF4162) NZD89_08280 PF00005 ABC transporter NZD89_08285 PF01061 ABC-2 type transporter NZD89_08315 PF05163 DinB family NZD89_08345 PF07690 Major Facilitator Superfamily NZD89_08365 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_08370 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_08395 PF01548 Transposase NZD89_08395 PF02371 Transposase IS116/IS110/IS902 family NZD89_08405 PF02371 Transposase IS116/IS110/IS902 family NZD89_08405 PF01548 Transposase NZD89_08410 PF00324 Amino acid permease NZD89_08420 PF01695 IstB-like ATP binding protein NZD89_08425 PF00665 Integrase core domain NZD89_08425 PF02796 Helix-turn-helix domain of resolvase NZD89_08440 PF01580 FtsK/SpoIIIE family NZD89_08440 PF09397 Ftsk gamma domain NZD89_08440 PF17854 FtsK alpha domain NZD89_08455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NZD89_08460 PF12857 TOBE-like domain NZD89_08460 PF00005 ABC transporter NZD89_08465 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_08470 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_08485 PF00465 Iron-containing alcohol dehydrogenase NZD89_08490 PF07690 Major Facilitator Superfamily NZD89_08495 PF02954 Bacterial regulatory protein, Fis family NZD89_08495 PF00989 PAS fold NZD89_08495 PF00158 Sigma-54 interaction domain NZD89_08510 PF00392 Bacterial regulatory proteins, gntR family NZD89_08510 PF07702 UTRA domain NZD89_08515 PF07690 Major Facilitator Superfamily NZD89_08525 PF12833 Helix-turn-helix domain NZD89_08560 PF12146 Serine aminopeptidase, S33 NZD89_08605 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_08610 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_08620 PF05721 Phytanoyl-CoA dioxygenase (PhyH) NZD89_08630 PF13520 Amino acid permease NZD89_08635 PF01569 PAP2 superfamily NZD89_08640 PF01925 Sulfite exporter TauE/SafE NZD89_08655 PF05257 CHAP domain NZD89_08655 PF01476 LysM domain NZD89_08720 PF00155 Aminotransferase class I and II NZD89_08730 PF00403 Heavy-metal-associated domain NZD89_08730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NZD89_08730 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_08735 PF02583 Metal-sensitive transcriptional repressor NZD89_08740 PF00403 Heavy-metal-associated domain NZD89_08745 PF00072 Response regulator receiver domain NZD89_08745 PF00196 Bacterial regulatory proteins, luxR family NZD89_08750 PF07730 Histidine kinase NZD89_08750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_08750 PF00672 HAMP domain NZD89_08755 PF00005 ABC transporter NZD89_08760 PF01032 FecCD transport family NZD89_08765 PF01032 FecCD transport family NZD89_08770 PF01497 Periplasmic binding protein NZD89_08775 PF00248 Aldo/keto reductase family NZD89_08780 PF03323 Bacillus/Clostridium GerA spore germination protein NZD89_08800 PF03707 Bacterial signalling protein N terminal repeat NZD89_08800 PF00990 Diguanylate cyclase, GGDEF domain NZD89_08800 PF00563 EAL domain NZD89_08810 PF00440 Bacterial regulatory proteins, tetR family NZD89_08815 PF00950 ABC 3 transport family NZD89_08820 PF00950 ABC 3 transport family NZD89_08825 PF00005 ABC transporter NZD89_08835 PF03824 High-affinity nickel-transport protein NZD89_08845 PF05958 tRNA (Uracil-5-)-methyltransferase NZD89_08850 PF02492 CobW/HypB/UreG, nucleotide-binding domain NZD89_08850 PF07683 Cobalamin synthesis protein cobW C-terminal domain NZD89_08855 PF07683 Cobalamin synthesis protein cobW C-terminal domain NZD89_08855 PF02492 CobW/HypB/UreG, nucleotide-binding domain NZD89_08875 PF00704 Glycosyl hydrolases family 18 NZD89_08875 PF00041 Fibronectin type III domain NZD89_08880 PF00483 Nucleotidyl transferase NZD89_08880 PF14602 Hexapeptide repeat of succinyl-transferase NZD89_08880 PF00132 Bacterial transferase hexapeptide (six repeats) NZD89_08885 PF00483 Nucleotidyl transferase NZD89_08885 PF00132 Bacterial transferase hexapeptide (six repeats) NZD89_08890 PF00535 Glycosyl transferase family 2 NZD89_08895 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NZD89_08895 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NZD89_08895 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NZD89_08900 PF00722 Glycosyl hydrolases family 16 NZD89_08920 PF12867 DinB superfamily NZD89_08960 PF13472 GDSL-like Lipase/Acylhydrolase family NZD89_09030 PF07969 Amidohydrolase family NZD89_09035 PF07690 Major Facilitator Superfamily NZD89_09055 PF00216 Bacterial DNA-binding protein NZD89_09075 PF00857 Isochorismatase family NZD89_09085 PF05598 Transposase domain (DUF772) NZD89_09100 PF00313 'Cold-shock' DNA-binding domain NZD89_09105 PF00487 Fatty acid desaturase NZD89_09140 PF00589 Phage integrase family NZD89_09140 PF14659 Phage integrase, N-terminal SAM-like domain NZD89_09155 PF01381 Helix-turn-helix NZD89_09170 PF09669 Phage regulatory protein Rha (Phage_pRha) NZD89_09170 PF03374 Phage antirepressor protein KilAC domain NZD89_09215 PF01695 IstB-like ATP binding protein NZD89_09265 PF10668 Phage terminase small subunit NZD89_09355 PF04865 Baseplate J-like protein NZD89_09470 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NZD89_09470 PF03129 Anticodon binding domain NZD89_09470 PF02824 TGS domain NZD89_09470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NZD89_09475 PF05198 Translation initiation factor IF-3, N-terminal domain NZD89_09475 PF00707 Translation initiation factor IF-3, C-terminal domain NZD89_09480 PF01632 Ribosomal protein L35 NZD89_09485 PF00453 Ribosomal protein L20 NZD89_09490 PF08032 RNA 2'-O ribose methyltransferase substrate binding NZD89_09490 PF00588 SpoU rRNA Methylase family NZD89_09500 PF02681 Divergent PAP2 family NZD89_09510 PF12652 CotJB protein NZD89_09515 PF05067 Manganese containing catalase NZD89_09525 PF01261 Xylose isomerase-like TIM barrel NZD89_09525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NZD89_09535 PF01261 Xylose isomerase-like TIM barrel NZD89_09540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_09540 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_09545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_09545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_09550 PF00892 EamA-like transporter family NZD89_09565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NZD89_09565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NZD89_09570 PF01238 Phosphomannose isomerase type I NZD89_09585 PF07726 ATPase family associated with various cellular activities (AAA) NZD89_09585 PF17863 AAA lid domain NZD89_09595 PF00676 Dehydrogenase E1 component NZD89_09595 PF16870 2-oxoglutarate dehydrogenase C-terminal NZD89_09595 PF02779 Transketolase, pyrimidine binding domain NZD89_09600 PF02817 e3 binding domain NZD89_09600 PF00364 Biotin-requiring enzyme NZD89_09600 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NZD89_09605 PF03009 Glycerophosphoryl diester phosphodiesterase family NZD89_09615 PF03949 Malic enzyme, NAD binding domain NZD89_09615 PF00390 Malic enzyme, N-terminal domain NZD89_09620 PF05651 Putative sugar diacid recognition NZD89_09620 PF17853 GGDEF-like domain NZD89_09620 PF13556 PucR C-terminal helix-turn-helix domain NZD89_09625 PF00005 ABC transporter NZD89_09625 PF17912 MalK OB fold domain NZD89_09625 PF03459 TOBE domain NZD89_09630 PF00381 PTS HPr component phosphorylation site NZD89_09635 PF00311 Phosphoenolpyruvate carboxylase NZD89_09640 PF00365 Phosphofructokinase NZD89_09645 PF01791 DeoC/LacD family aldolase NZD89_09650 PF00731 AIR carboxylase NZD89_09655 PF02222 ATP-grasp domain NZD89_09655 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NZD89_09665 PF07730 Histidine kinase NZD89_09665 PF05384 Sensor protein DegS NZD89_09665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_09670 PF01409 tRNA synthetases class II core domain (F) NZD89_09670 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NZD89_09675 PF03484 tRNA synthetase B5 domain NZD89_09675 PF03483 B3/4 domain NZD89_09675 PF01588 Putative tRNA binding domain NZD89_09675 PF03147 Ferredoxin-fold anticodon binding domain NZD89_09675 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NZD89_09680 PF05164 Cell division protein ZapA NZD89_09695 PF01713 Smr domain NZD89_09695 PF00488 MutS domain V NZD89_09705 PF00905 Penicillin binding protein transpeptidase domain NZD89_09705 PF00912 Transglycosylase NZD89_09715 PF05227 CHASE3 domain NZD89_09715 PF00672 HAMP domain NZD89_09715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NZD89_09730 PF00795 Carbon-nitrogen hydrolase NZD89_09730 PF02540 NAD synthase NZD89_09735 PF02540 NAD synthase NZD89_09740 PF01709 Transcriptional regulator NZD89_09750 PF02075 Crossover junction endodeoxyribonuclease RuvC NZD89_09755 PF07499 RuvA, C-terminal domain NZD89_09755 PF01330 RuvA N terminal domain NZD89_09760 PF17864 RuvB AAA lid domain NZD89_09760 PF05491 RuvB C-terminal winged helix domain NZD89_09760 PF05496 Holliday junction DNA helicase RuvB P-loop domain NZD89_09765 PF04542 Sigma-70 region 2 NZD89_09770 PF12791 Anti-sigma factor N-terminus NZD89_09790 PF02547 Queuosine biosynthesis protein NZD89_09795 PF01702 Queuine tRNA-ribosyltransferase NZD89_09810 PF17158 Membrane-associated sensor, integral membrane domain NZD89_09810 PF00990 Diguanylate cyclase, GGDEF domain NZD89_09815 PF04239 Protein of unknown function (DUF421) NZD89_09820 PF14667 Polysaccharide biosynthesis C-terminal domain NZD89_09820 PF01943 Polysaccharide biosynthesis protein NZD89_09825 PF13797 Post-transcriptional regulator NZD89_09830 PF02355 Protein export membrane protein NZD89_09835 PF02355 Protein export membrane protein NZD89_09840 PF01545 Cation efflux family NZD89_09840 PF16916 Dimerisation domain of Zinc Transporter NZD89_09845 PF17768 RecJ OB domain NZD89_09845 PF10141 Single-strand DNA-specific exonuclease, C terminal domain NZD89_09845 PF02272 DHHA1 domain NZD89_09845 PF01368 DHH family NZD89_09850 PF00156 Phosphoribosyl transferase domain NZD89_09855 PF02824 TGS domain NZD89_09855 PF04607 Region found in RelA / SpoT proteins NZD89_09855 PF13291 ACT domain NZD89_09860 PF02580 D-Tyr-tRNA(Tyr) deacylase NZD89_09865 PF00753 Metallo-beta-lactamase superfamily NZD89_09875 PF03707 Bacterial signalling protein N terminal repeat NZD89_09875 PF13188 PAS domain NZD89_09875 PF00990 Diguanylate cyclase, GGDEF domain NZD89_09875 PF00563 EAL domain NZD89_09880 PF00999 Sodium/hydrogen exchanger family NZD89_09880 PF02080 TrkA-C domain NZD89_09880 PF02254 TrkA-N domain NZD89_09890 PF01925 Sulfite exporter TauE/SafE NZD89_09895 PF13508 Acetyltransferase (GNAT) domain NZD89_09905 PF01593 Flavin containing amine oxidoreductase NZD89_09910 PF00762 Ferrochelatase NZD89_09915 PF01208 Uroporphyrinogen decarboxylase (URO-D) NZD89_09920 PF06491 Disulphide isomerase NZD89_09925 PF01557 Fumarylacetoacetate (FAA) hydrolase family NZD89_09930 PF18357 Diphteria toxin repressor SH3 domain NZD89_09930 PF02742 Iron dependent repressor, metal binding and dimerisation domain NZD89_09930 PF01325 Iron dependent repressor, N-terminal DNA binding domain NZD89_09935 PF00768 D-alanyl-D-alanine carboxypeptidase NZD89_09935 PF07943 Penicillin-binding protein 5, C-terminal domain NZD89_09945 PF01207 Dihydrouridine synthase (Dus) NZD89_09950 PF10502 Signal peptidase, peptidase S26 NZD89_09955 PF07690 Major Facilitator Superfamily NZD89_09960 PF13408 Recombinase zinc beta ribbon domain NZD89_09960 PF07508 Recombinase NZD89_09960 PF00239 Resolvase, N terminal domain NZD89_09975 PF07690 Major Facilitator Superfamily NZD89_09980 PF00149 Calcineurin-like phosphoesterase NZD89_09985 PF13514 AAA domain NZD89_09990 PF13361 UvrD-like helicase C-terminal domain NZD89_09990 PF12705 PD-(D/E)XK nuclease superfamily NZD89_09995 PF00580 UvrD/REP helicase N-terminal domain NZD89_09995 PF12705 PD-(D/E)XK nuclease superfamily NZD89_09995 PF13361 UvrD-like helicase C-terminal domain NZD89_10000 PF00483 Nucleotidyl transferase NZD89_10010 PF00994 Probable molybdopterin binding domain NZD89_10010 PF03454 MoeA C-terminal region (domain IV) NZD89_10010 PF03453 MoeA N-terminal region (domain I and II) NZD89_10015 PF00248 Aldo/keto reductase family NZD89_10040 PF13349 Putative adhesin NZD89_10050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NZD89_10050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NZD89_10055 PF00056 lactate/malate dehydrogenase, NAD binding domain NZD89_10055 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NZD89_10060 PF17126 RsmF rRNA methyltransferase first C-terminal domain NZD89_10060 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF NZD89_10060 PF01189 16S rRNA methyltransferase RsmB/F NZD89_10065 PF14489 QueF-like protein NZD89_10070 PF02261 Aspartate decarboxylase NZD89_10080 PF01494 FAD binding domain NZD89_10085 PF09339 IclR helix-turn-helix domain NZD89_10085 PF01614 Bacterial transcriptional regulator NZD89_10095 PF00171 Aldehyde dehydrogenase family NZD89_10100 PF01557 Fumarylacetoacetate (FAA) hydrolase family NZD89_10105 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation NZD89_10105 PF01118 Semialdehyde dehydrogenase, NAD binding domain NZD89_10110 PF07836 DmpG-like communication domain NZD89_10110 PF00682 HMGL-like NZD89_10120 PF01361 Tautomerase enzyme NZD89_10135 PF00005 ABC transporter NZD89_10150 PF00085 Thioredoxin NZD89_10160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NZD89_10160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NZD89_10165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NZD89_10165 PF02770 Acyl-CoA dehydrogenase, middle domain NZD89_10165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NZD89_10170 PF02803 Thiolase, C-terminal domain NZD89_10170 PF00108 Thiolase, N-terminal domain NZD89_10205 PF01548 Transposase NZD89_10205 PF02371 Transposase IS116/IS110/IS902 family NZD89_10225 PF02796 Helix-turn-helix domain of resolvase NZD89_10225 PF00665 Integrase core domain NZD89_10230 PF01695 IstB-like ATP binding protein NZD89_10240 PF01548 Transposase NZD89_10240 PF02371 Transposase IS116/IS110/IS902 family NZD89_10250 PF01022 Bacterial regulatory protein, arsR family NZD89_10260 PF07690 Major Facilitator Superfamily NZD89_10270 PF12146 Serine aminopeptidase, S33 NZD89_10275 PF00158 Sigma-54 interaction domain NZD89_10275 PF02954 Bacterial regulatory protein, Fis family NZD89_10275 PF01590 GAF domain NZD89_10280 PF00355 Rieske [2Fe-2S] domain NZD89_10280 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NZD89_10285 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NZD89_10290 PF00180 Isocitrate/isopropylmalate dehydrogenase NZD89_10295 PF00171 Aldehyde dehydrogenase family NZD89_10300 PF07690 Major Facilitator Superfamily NZD89_10310 PF00596 Class II Aldolase and Adducin N-terminal domain NZD89_10320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_10330 PF00083 Sugar (and other) transporter NZD89_10345 PF12419 SNF2 Helicase protein NZD89_10345 PF00271 Helicase conserved C-terminal domain NZD89_10345 PF00176 SNF2 family N-terminal domain NZD89_10355 PF00202 Aminotransferase class-III NZD89_10365 PF03129 Anticodon binding domain NZD89_10365 PF13393 Histidyl-tRNA synthetase NZD89_10370 PF01336 OB-fold nucleic acid binding domain NZD89_10370 PF00152 tRNA synthetases class II (D, K and N) NZD89_10370 PF02938 GAD domain NZD89_10380 PF02082 Transcriptional regulator NZD89_10385 PF00266 Aminotransferase class-V NZD89_10395 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NZD89_10400 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NZD89_10410 PF01594 AI-2E family transporter NZD89_10415 PF01411 tRNA synthetases class II (A) NZD89_10415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NZD89_10415 PF02272 DHHA1 domain NZD89_10420 PF06135 IreB regulatory phosphoprotein NZD89_10425 PF03652 Holliday junction resolvase NZD89_10430 PF02618 YceG-like family NZD89_10435 PF03717 Penicillin-binding Protein dimerisation domain NZD89_10435 PF00905 Penicillin binding protein transpeptidase domain NZD89_10440 PF07730 Histidine kinase NZD89_10445 PF00072 Response regulator receiver domain NZD89_10445 PF00196 Bacterial regulatory proteins, luxR family NZD89_10450 PF04542 Sigma-70 region 2 NZD89_10450 PF04545 Sigma-70, region 4 NZD89_10460 PF01926 50S ribosome-binding GTPase NZD89_10460 PF12631 MnmE helical domain NZD89_10460 PF10396 GTP-binding protein TrmE N-terminus NZD89_10465 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NZD89_10465 PF01488 Shikimate / quinate 5-dehydrogenase NZD89_10465 PF08501 Shikimate dehydrogenase substrate binding domain NZD89_10470 PF01467 Cytidylyltransferase-like NZD89_10475 PF01966 HD domain NZD89_10490 PF02742 Iron dependent repressor, metal binding and dimerisation domain NZD89_10490 PF01325 Iron dependent repressor, N-terminal DNA binding domain NZD89_10505 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_10510 PF06144 DNA polymerase III, delta subunit NZD89_10520 PF01649 Ribosomal protein S20 NZD89_10525 PF03418 Germination protease NZD89_10530 PF00285 Citrate synthase, C-terminal domain NZD89_10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_10535 PF03466 LysR substrate binding domain NZD89_10555 PF06421 GTP-binding protein LepA C-terminus NZD89_10555 PF00009 Elongation factor Tu GTP binding domain NZD89_10555 PF00679 Elongation factor G C-terminus NZD89_10555 PF03144 Elongation factor Tu domain 2 NZD89_10560 PF06969 HemN C-terminal domain NZD89_10560 PF04055 Radical SAM superfamily NZD89_10565 PF01628 HrcA protein C terminal domain NZD89_10565 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding NZD89_10570 PF01025 GrpE NZD89_10575 PF00012 Hsp70 protein NZD89_10580 PF00226 DnaJ domain NZD89_10580 PF01556 DnaJ C terminal domain NZD89_10580 PF00684 DnaJ central domain NZD89_10590 PF04452 RNA methyltransferase NZD89_10595 PF04055 Radical SAM superfamily NZD89_10595 PF00919 Uncharacterized protein family UPF0004 NZD89_10595 PF01938 TRAM domain NZD89_10600 PF01791 DeoC/LacD family aldolase NZD89_10605 PF02690 Na+/Pi-cotransporter NZD89_10610 PF01165 Ribosomal protein S21 NZD89_10615 PF09424 Yqey-like protein NZD89_10625 PF06898 Putative stage IV sporulation protein YqfD NZD89_10630 PF02562 PhoH-like protein NZD89_10635 PF07698 7TM receptor with intracellular HD hydrolase NZD89_10635 PF07697 7TM-HD extracellular NZD89_10635 PF01966 HD domain NZD89_10640 PF02130 Uncharacterized protein family UPF0054 NZD89_10650 PF01926 50S ribosome-binding GTPase NZD89_10650 PF07650 KH domain NZD89_10660 PF02565 Recombination protein O C terminal NZD89_10660 PF11967 Recombination protein O N terminal NZD89_10665 PF03618 Kinase/pyrophosphorylase NZD89_10670 PF08275 DNA primase catalytic core, N-terminal domain NZD89_10670 PF10410 DnaB-helicase binding domain of primase NZD89_10670 PF01807 CHC2 zinc finger NZD89_10675 PF04542 Sigma-70 region 2 NZD89_10675 PF00140 Sigma-70 factor, region 1.2 NZD89_10675 PF03979 Sigma-70 factor, region 1.1 NZD89_10675 PF04545 Sigma-70, region 4 NZD89_10675 PF04539 Sigma-70 region 3 NZD89_10685 PF04816 tRNA (adenine(22)-N(1))-methyltransferase NZD89_10690 PF01784 NIF3 (NGG1p interacting factor 3) NZD89_10710 PF05598 Transposase domain (DUF772) NZD89_10725 PF01425 Amidase NZD89_10735 PF00265 Thymidine kinase NZD89_10745 PF00535 Glycosyl transferase family 2 NZD89_10750 PF00535 Glycosyl transferase family 2 NZD89_10755 PF00535 Glycosyl transferase family 2 NZD89_10760 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NZD89_10775 PF00535 Glycosyl transferase family 2 NZD89_10780 PF00483 Nucleotidyl transferase NZD89_10785 PF16363 GDP-mannose 4,6 dehydratase NZD89_10790 PF04321 RmlD substrate binding domain NZD89_10795 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NZD89_10815 PF01225 Mur ligase family, catalytic domain NZD89_10815 PF02875 Mur ligase family, glutamate ligase domain NZD89_10815 PF08245 Mur ligase middle domain NZD89_10825 PF01820 D-ala D-ala ligase N-terminus NZD89_10825 PF07478 D-ala D-ala ligase C-terminus NZD89_10835 PF00535 Glycosyl transferase family 2 NZD89_10850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NZD89_10850 PF00672 HAMP domain NZD89_10850 PF02743 Cache domain NZD89_10860 PF01638 HxlR-like helix-turn-helix NZD89_10865 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NZD89_10870 PF02525 Flavodoxin-like fold NZD89_10875 PF07690 Major Facilitator Superfamily NZD89_10880 PF03466 LysR substrate binding domain NZD89_10880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_10910 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NZD89_10915 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NZD89_10920 PF13649 Methyltransferase domain NZD89_10925 PF00497 Bacterial extracellular solute-binding proteins, family 3 NZD89_10930 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_10945 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NZD89_10960 PF00083 Sugar (and other) transporter NZD89_10975 PF03788 LrgA family NZD89_10980 PF04172 LrgB-like family NZD89_10990 PF03466 LysR substrate binding domain NZD89_10990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_10995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_10995 PF03466 LysR substrate binding domain NZD89_11000 PF14480 DNA polymerase III polC-type N-terminus I NZD89_11000 PF07733 Bacterial DNA polymerase III alpha NTPase domain NZD89_11000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NZD89_11000 PF02811 PHP domain NZD89_11000 PF14579 Helix-hairpin-helix motif NZD89_11000 PF11490 DNA polymerase III polC-type N-terminus II NZD89_11000 PF00929 Exonuclease NZD89_11005 PF02603 HPr Serine kinase N terminus NZD89_11005 PF07475 HPr Serine kinase C-terminal domain NZD89_11010 PF00480 ROK family NZD89_11015 PF02222 ATP-grasp domain NZD89_11020 PF00106 short chain dehydrogenase NZD89_11025 PF00083 Sugar (and other) transporter NZD89_11065 PF07690 Major Facilitator Superfamily NZD89_11075 PF01613 Flavin reductase like domain NZD89_11080 PF01384 Phosphate transporter family NZD89_11085 PF00005 ABC transporter NZD89_11090 PF12679 ABC-2 family transporter protein NZD89_11100 PF00583 Acetyltransferase (GNAT) family NZD89_11115 PF04204 Homoserine O-succinyltransferase NZD89_11120 PF16916 Dimerisation domain of Zinc Transporter NZD89_11120 PF01545 Cation efflux family NZD89_11140 PF01790 Prolipoprotein diacylglyceryl transferase NZD89_11150 PF01522 Polysaccharide deacetylase NZD89_11155 PF00269 Small, acid-soluble spore proteins, alpha/beta type NZD89_11160 PF13419 Haloacid dehalogenase-like hydrolase NZD89_11165 PF04055 Radical SAM superfamily NZD89_11170 PF01242 6-pyruvoyl tetrahydropterin synthase NZD89_11175 PF01638 HxlR-like helix-turn-helix NZD89_11185 PF00881 Nitroreductase family NZD89_11190 PF01497 Periplasmic binding protein NZD89_11195 PF01032 FecCD transport family NZD89_11200 PF00005 ABC transporter NZD89_11205 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NZD89_11210 PF02654 Cobalamin-5-phosphate synthase NZD89_11215 PF00300 Histidine phosphatase superfamily (branch 1) NZD89_11230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NZD89_11230 PF00289 Biotin carboxylase, N-terminal domain NZD89_11230 PF02785 Biotin carboxylase C-terminal domain NZD89_11235 PF00364 Biotin-requiring enzyme NZD89_11240 PF00682 HMGL-like NZD89_11245 PF00378 Enoyl-CoA hydratase/isomerase NZD89_11250 PF01039 Carboxyl transferase domain NZD89_11255 PF01144 Coenzyme A transferase NZD89_11260 PF01144 Coenzyme A transferase NZD89_11265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NZD89_11265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NZD89_11265 PF02770 Acyl-CoA dehydrogenase, middle domain NZD89_11270 PF01575 MaoC like domain NZD89_11275 PF00155 Aminotransferase class I and II NZD89_11275 PF00392 Bacterial regulatory proteins, gntR family NZD89_11280 PF00892 EamA-like transporter family NZD89_11305 PF03323 Bacillus/Clostridium GerA spore germination protein NZD89_11310 PF03992 Antibiotic biosynthesis monooxygenase NZD89_11325 PF01047 MarR family NZD89_11335 PF00664 ABC transporter transmembrane region NZD89_11335 PF00005 ABC transporter NZD89_11340 PF13302 Acetyltransferase (GNAT) domain NZD89_11345 PF07690 Major Facilitator Superfamily NZD89_11350 PF02567 Phenazine biosynthesis-like protein NZD89_11380 PF00857 Isochorismatase family NZD89_11385 PF07690 Major Facilitator Superfamily NZD89_11390 PF00005 ABC transporter NZD89_11390 PF00664 ABC transporter transmembrane region NZD89_11395 PF00005 ABC transporter NZD89_11395 PF00664 ABC transporter transmembrane region NZD89_11410 PF00356 Bacterial regulatory proteins, lacI family NZD89_11425 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_11430 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_11435 PF08533 Beta-galactosidase C-terminal domain NZD89_11435 PF08532 Beta-galactosidase trimerisation domain NZD89_11435 PF02449 Beta-galactosidase NZD89_11440 PF04962 KduI/IolB family NZD89_11450 PF07470 Glycosyl Hydrolase Family 88 NZD89_11460 PF01301 Glycosyl hydrolases family 35 NZD89_11470 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NZD89_11485 PF01546 Peptidase family M20/M25/M40 NZD89_11485 PF07687 Peptidase dimerisation domain NZD89_11495 PF07687 Peptidase dimerisation domain NZD89_11495 PF01546 Peptidase family M20/M25/M40 NZD89_11515 PF01546 Peptidase family M20/M25/M40 NZD89_11515 PF07687 Peptidase dimerisation domain NZD89_11520 PF01261 Xylose isomerase-like TIM barrel NZD89_11555 PF00480 ROK family NZD89_11560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_11560 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_11575 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_11580 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_11590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_11590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_11620 PF02371 Transposase IS116/IS110/IS902 family NZD89_11620 PF01548 Transposase NZD89_11630 PF01979 Amidohydrolase family NZD89_11635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_11635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_11640 PF01609 Transposase DDE domain NZD89_11655 PF00480 ROK family NZD89_11660 PF01979 Amidohydrolase family NZD89_11665 PF01738 Dienelactone hydrolase family NZD89_11675 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NZD89_11685 PF03190 Protein of unknown function, DUF255 NZD89_11690 PF03190 Protein of unknown function, DUF255 NZD89_11700 PF07849 Protein of unknown function (DUF1641) NZD89_11705 PF02634 FdhD/NarQ family NZD89_11710 PF01544 CorA-like Mg2+ transporter protein NZD89_11715 PF01040 UbiA prenyltransferase family NZD89_11720 PF00378 Enoyl-CoA hydratase/isomerase NZD89_11725 PF00501 AMP-binding enzyme NZD89_11725 PF13193 AMP-binding enzyme C-terminal domain NZD89_11730 PF00425 chorismate binding enzyme NZD89_11735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NZD89_11735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NZD89_11735 PF16582 Middle domain of thiamine pyrophosphate NZD89_11740 PF00561 alpha/beta hydrolase fold NZD89_11750 PF12849 PBP superfamily domain NZD89_11755 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_11760 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_11765 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase NZD89_11765 PF00534 Glycosyl transferases group 1 NZD89_11770 PF01522 Polysaccharide deacetylase NZD89_11785 PF01613 Flavin reductase like domain NZD89_11790 PF00877 NlpC/P60 family NZD89_11790 PF01476 LysM domain NZD89_11795 PF01895 PhoU domain NZD89_11800 PF00005 ABC transporter NZD89_11805 PF13508 Acetyltransferase (GNAT) domain NZD89_11825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_11845 PF01678 Diaminopimelate epimerase NZD89_11855 PF00892 EamA-like transporter family NZD89_11860 PF00535 Glycosyl transferase family 2 NZD89_11870 PF16123 Hydroxyacylglutathione hydrolase C-terminus NZD89_11870 PF00753 Metallo-beta-lactamase superfamily NZD89_11880 PF01923 Cobalamin adenosyltransferase NZD89_11885 PF13344 Haloacid dehalogenase-like hydrolase NZD89_11890 PF03477 ATP cone domain NZD89_11895 PF02867 Ribonucleotide reductase, barrel domain NZD89_11895 PF00317 Ribonucleotide reductase, all-alpha domain NZD89_11895 PF03477 ATP cone domain NZD89_11920 PF02384 N-6 DNA Methylase NZD89_11925 PF01420 Type I restriction modification DNA specificity domain NZD89_11930 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NZD89_11930 PF18766 SWI2/SNF2 ATPase NZD89_11930 PF11867 Domain of unknown function (DUF3387) NZD89_11935 PF02229 Transcriptional Coactivator p15 (PC4) NZD89_11940 PF01695 IstB-like ATP binding protein NZD89_11945 PF02796 Helix-turn-helix domain of resolvase NZD89_11945 PF00665 Integrase core domain NZD89_11950 PF01695 IstB-like ATP binding protein NZD89_11975 PF01695 IstB-like ATP binding protein NZD89_11985 PF02742 Iron dependent repressor, metal binding and dimerisation domain NZD89_11985 PF01325 Iron dependent repressor, N-terminal DNA binding domain NZD89_11990 PF01566 Natural resistance-associated macrophage protein NZD89_12020 PF13847 Methyltransferase domain NZD89_12020 PF03551 Transcriptional regulator PadR-like family NZD89_12050 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NZD89_12060 PF01022 Bacterial regulatory protein, arsR family NZD89_12100 PF00581 Rhodanese-like domain NZD89_12105 PF13686 DsrE/DsrF/DrsH-like family NZD89_12110 PF00581 Rhodanese-like domain NZD89_12110 PF01206 Sulfurtransferase TusA NZD89_12115 PF00581 Rhodanese-like domain NZD89_12115 PF00753 Metallo-beta-lactamase superfamily NZD89_12120 PF01925 Sulfite exporter TauE/SafE NZD89_12125 PF00581 Rhodanese-like domain NZD89_12130 PF02583 Metal-sensitive transcriptional repressor NZD89_12135 PF00085 Thioredoxin NZD89_12145 PF01209 ubiE/COQ5 methyltransferase family NZD89_12155 PF02463 RecF/RecN/SMC N terminal domain NZD89_12205 PF07729 FCD domain NZD89_12205 PF00392 Bacterial regulatory proteins, gntR family NZD89_12215 PF00378 Enoyl-CoA hydratase/isomerase NZD89_12220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NZD89_12220 PF02770 Acyl-CoA dehydrogenase, middle domain NZD89_12220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NZD89_12225 PF00682 HMGL-like NZD89_12230 PF02515 CoA-transferase family III NZD89_12240 PF03328 HpcH/HpaI aldolase/citrate lyase family NZD89_12245 PF05681 Fumarate hydratase (Fumerase) NZD89_12255 PF00083 Sugar (and other) transporter NZD89_12260 PF00753 Metallo-beta-lactamase superfamily NZD89_12265 PF00171 Aldehyde dehydrogenase family NZD89_12270 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_12270 PF00107 Zinc-binding dehydrogenase NZD89_12275 PF03328 HpcH/HpaI aldolase/citrate lyase family NZD89_12280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NZD89_12285 PF00753 Metallo-beta-lactamase superfamily NZD89_12290 PF00171 Aldehyde dehydrogenase family NZD89_12295 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_12295 PF00107 Zinc-binding dehydrogenase NZD89_12300 PF02899 Phage integrase, N-terminal SAM-like domain NZD89_12300 PF00589 Phage integrase family NZD89_12320 PF18277 AbrB C-terminal domain NZD89_12320 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NZD89_12340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_12345 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_12350 PF12911 N-terminal TM domain of oligopeptide transport permease C NZD89_12350 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_12355 PF00005 ABC transporter NZD89_12355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_12360 PF00005 ABC transporter NZD89_12360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_12375 PF01548 Transposase NZD89_12375 PF02371 Transposase IS116/IS110/IS902 family NZD89_12385 PF01230 HIT domain NZD89_12440 PF01872 RibD C-terminal domain NZD89_12465 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NZD89_12465 PF01348 Type II intron maturase NZD89_12485 PF01609 Transposase DDE domain NZD89_12500 PF00083 Sugar (and other) transporter NZD89_12505 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) NZD89_12520 PF05861 Bacterial phosphonate metabolism protein (PhnI) NZD89_12525 PF06007 Phosphonate metabolism protein PhnJ NZD89_12530 PF00132 Bacterial transferase hexapeptide (six repeats) NZD89_12540 PF07969 Amidohydrolase family NZD89_12545 PF05598 Transposase domain (DUF772) NZD89_12550 PF07969 Amidohydrolase family NZD89_12560 PF00392 Bacterial regulatory proteins, gntR family NZD89_12560 PF07729 FCD domain NZD89_12575 PF05861 Bacterial phosphonate metabolism protein (PhnI) NZD89_12580 PF06007 Phosphonate metabolism protein PhnJ NZD89_12585 PF00005 ABC transporter NZD89_12590 PF00005 ABC transporter NZD89_12595 PF07969 Amidohydrolase family NZD89_12600 PF07969 Amidohydrolase family NZD89_12610 PF04854 Protein of unknown function, DUF624 NZD89_12620 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_12625 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_12645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NZD89_12650 PF01070 FMN-dependent dehydrogenase NZD89_12655 PF01070 FMN-dependent dehydrogenase NZD89_12660 PF02441 Flavoprotein NZD89_12670 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NZD89_12675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_12675 PF03466 LysR substrate binding domain NZD89_12690 PF00440 Bacterial regulatory proteins, tetR family NZD89_12695 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_12700 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_12705 PF01547 Bacterial extracellular solute-binding protein NZD89_12730 PF07687 Peptidase dimerisation domain NZD89_12730 PF01546 Peptidase family M20/M25/M40 NZD89_12735 PF07875 Coat F domain NZD89_12745 PF13823 Alcohol dehydrogenase GroES-associated NZD89_12745 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_12745 PF00107 Zinc-binding dehydrogenase NZD89_12750 PF07875 Coat F domain NZD89_12765 PF13520 Amino acid permease NZD89_12770 PF00296 Luciferase-like monooxygenase NZD89_12775 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal NZD89_12775 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal NZD89_12780 PF00296 Luciferase-like monooxygenase NZD89_12785 PF02667 Short chain fatty acid transporter NZD89_12790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NZD89_12790 PF02770 Acyl-CoA dehydrogenase, middle domain NZD89_12790 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NZD89_12795 PF01614 Bacterial transcriptional regulator NZD89_12795 PF09339 IclR helix-turn-helix domain NZD89_12800 PF00355 Rieske [2Fe-2S] domain NZD89_12810 PF00037 4Fe-4S binding domain NZD89_12815 PF03323 Bacillus/Clostridium GerA spore germination protein NZD89_12825 PF03845 Spore germination protein NZD89_12835 PF00486 Transcriptional regulatory protein, C terminal NZD89_12835 PF00072 Response regulator receiver domain NZD89_12840 PF00512 His Kinase A (phospho-acceptor) domain NZD89_12840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_12840 PF00672 HAMP domain NZD89_12845 PF01569 PAP2 superfamily NZD89_12850 PF09335 SNARE associated Golgi protein NZD89_12855 PF09335 SNARE associated Golgi protein NZD89_12865 PF14667 Polysaccharide biosynthesis C-terminal domain NZD89_12865 PF01943 Polysaccharide biosynthesis protein NZD89_12875 PF13091 PLD-like domain NZD89_12875 PF13396 Phospholipase_D-nuclease N-terminal NZD89_12885 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NZD89_12890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_12895 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_12920 PF01047 MarR family NZD89_12925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NZD89_12925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NZD89_12940 PF00535 Glycosyl transferase family 2 NZD89_12945 PF03816 Cell envelope-related transcriptional attenuator domain NZD89_12970 PF01699 Sodium/calcium exchanger protein NZD89_12980 PF00291 Pyridoxal-phosphate dependent enzyme NZD89_12980 PF13291 ACT domain NZD89_12985 PF00155 Aminotransferase class I and II NZD89_12995 PF00749 tRNA synthetases class I (E and Q), catalytic domain NZD89_13020 PF02151 UvrB/uvrC motif NZD89_13020 PF01541 GIY-YIG catalytic domain NZD89_13020 PF08459 UvrC Helix-hairpin-helix N-terminal NZD89_13025 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NZD89_13030 PF00890 FAD binding domain NZD89_13030 PF02910 Fumarate reductase flavoprotein C-term NZD89_13035 PF13183 4Fe-4S dicluster domain NZD89_13035 PF13085 2Fe-2S iron-sulfur cluster binding domain NZD89_13050 PF00581 Rhodanese-like domain NZD89_13050 PF12368 Rhodanase C-terminal NZD89_13050 PF17773 UPF0176 acylphosphatase like domain NZD89_13060 PF00155 Aminotransferase class I and II NZD89_13065 PF00196 Bacterial regulatory proteins, luxR family NZD89_13070 PF01047 MarR family NZD89_13075 PF01177 Asp/Glu/Hydantoin racemase NZD89_13080 PF01725 Ham1 family NZD89_13085 PF12850 Calcineurin-like phosphoesterase superfamily domain NZD89_13100 PF05698 Bacterial trigger factor protein (TF) C-terminus NZD89_13100 PF05697 Bacterial trigger factor protein (TF) NZD89_13100 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NZD89_13105 PF00574 Clp protease NZD89_13110 PF06689 ClpX C4-type zinc finger NZD89_13110 PF10431 C-terminal, D2-small domain, of ClpB protein NZD89_13110 PF07724 AAA domain (Cdc48 subfamily) NZD89_13115 PF05362 Lon protease (S16) C-terminal proteolytic domain NZD89_13115 PF00004 ATPase family associated with various cellular activities (AAA) NZD89_13120 PF05362 Lon protease (S16) C-terminal proteolytic domain NZD89_13120 PF02190 ATP-dependent protease La (LON) substrate-binding domain NZD89_13120 PF00004 ATPase family associated with various cellular activities (AAA) NZD89_13125 PF01926 50S ribosome-binding GTPase NZD89_13130 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NZD89_13130 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NZD89_13130 PF01488 Shikimate / quinate 5-dehydrogenase NZD89_13140 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NZD89_13140 PF03900 Porphobilinogen deaminase, C-terminal domain NZD89_13150 PF00490 Delta-aminolevulinic acid dehydratase NZD89_13155 PF00202 Aminotransferase class-III NZD89_13180 PF10458 Valyl tRNA synthetase tRNA binding arm NZD89_13180 PF00133 tRNA synthetases class I (I, L, M and V) NZD89_13180 PF08264 Anticodon-binding domain of tRNA NZD89_13185 PF08245 Mur ligase middle domain NZD89_13185 PF02875 Mur ligase family, glutamate ligase domain NZD89_13190 PF08245 Mur ligase middle domain NZD89_13190 PF02875 Mur ligase family, glutamate ligase domain NZD89_13190 PF01225 Mur ligase family, catalytic domain NZD89_13195 PF00282 Pyridoxal-dependent decarboxylase conserved domain NZD89_13205 PF06750 Bacterial Peptidase A24 N-terminal domain NZD89_13205 PF01478 Type IV leader peptidase family NZD89_13210 PF03990 G5-linked-Ubiquitin-like domain NZD89_13210 PF06725 3D domain NZD89_13210 PF07501 G5 domain NZD89_13215 PF00437 Type II/IV secretion system protein NZD89_13230 PF04002 RadC-like JAB domain NZD89_13240 PF04085 rod shape-determining protein MreC NZD89_13250 PF03775 Septum formation inhibitor MinC, C-terminal domain NZD89_13255 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NZD89_13265 PF00571 CBS domain NZD89_13265 PF02163 Peptidase family M50 NZD89_13270 PF00829 Ribosomal prokaryotic L21 protein NZD89_13275 PF04327 Cysteine protease Prp NZD89_13280 PF01016 Ribosomal L27 protein NZD89_13290 PF01926 50S ribosome-binding GTPase NZD89_13290 PF09269 Domain of unknown function (DUF1967) NZD89_13290 PF01018 GTP1/OBG NZD89_13300 PF00437 Type II/IV secretion system protein NZD89_13300 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NZD89_13335 PF01202 Shikimate kinase NZD89_13340 PF00308 Bacterial dnaA protein NZD89_13340 PF08299 Bacterial dnaA protein helix-turn-helix NZD89_13350 PF00271 Helicase conserved C-terminal domain NZD89_13350 PF00176 SNF2 family N-terminal domain NZD89_13355 PF08669 Glycine cleavage T-protein C-terminal barrel domain NZD89_13355 PF01571 Aminomethyltransferase folate-binding domain NZD89_13360 PF02347 Glycine cleavage system P-protein NZD89_13365 PF02347 Glycine cleavage system P-protein NZD89_13370 PF00300 Histidine phosphatase superfamily (branch 1) NZD89_13375 PF01220 Dehydroquinase class II NZD89_13380 PF01132 Elongation factor P (EF-P) OB domain NZD89_13380 PF08207 Elongation factor P (EF-P) KOW-like domain NZD89_13380 PF09285 Elongation factor P, C-terminal NZD89_13385 PF10942 Protein of unknown function (DUF2619) NZD89_13395 PF09548 Stage III sporulation protein AB (spore_III_AB) NZD89_13405 PF06686 Stage III sporulation protein AC/AD protein family NZD89_13410 PF09546 Stage III sporulation protein AE (spore_III_AE) NZD89_13430 PF00364 Biotin-requiring enzyme NZD89_13435 PF02785 Biotin carboxylase C-terminal domain NZD89_13435 PF00289 Biotin carboxylase, N-terminal domain NZD89_13435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NZD89_13440 PF03780 Asp23 family, cell envelope-related function NZD89_13455 PF01029 NusB family NZD89_13460 PF00814 Glycoprotease family NZD89_13465 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_13470 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NZD89_13470 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NZD89_13475 PF13742 OB-fold nucleic acid binding domain NZD89_13475 PF02601 Exonuclease VII, large subunit NZD89_13480 PF02609 Exonuclease VII small subunit NZD89_13485 PF00348 Polyprenyl synthetase NZD89_13495 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NZD89_13495 PF02779 Transketolase, pyrimidine binding domain NZD89_13495 PF02780 Transketolase, C-terminal domain NZD89_13500 PF01728 FtsJ-like methyltransferase NZD89_13500 PF01479 S4 domain NZD89_13510 PF01513 ATP-NAD kinase NZD89_13515 PF13476 AAA domain NZD89_13520 PF05580 SpoIVB peptidase S55 NZD89_13520 PF17820 PDZ domain NZD89_13525 PF00072 Response regulator receiver domain NZD89_13525 PF08769 Sporulation initiation factor Spo0A C terminal NZD89_13535 PF00403 Heavy-metal-associated domain NZD89_13540 PF00403 Heavy-metal-associated domain NZD89_13550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NZD89_13550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NZD89_13555 PF00596 Class II Aldolase and Adducin N-terminal domain NZD89_13560 PF01261 Xylose isomerase-like TIM barrel NZD89_13565 PF02589 LUD domain NZD89_13570 PF02589 LUD domain NZD89_13570 PF13183 4Fe-4S dicluster domain NZD89_13570 PF11870 Domain of unknown function (DUF3390) NZD89_13575 PF02754 Cysteine-rich domain NZD89_13580 PF07729 FCD domain NZD89_13580 PF00392 Bacterial regulatory proteins, gntR family NZD89_13590 PF00583 Acetyltransferase (GNAT) family NZD89_13605 PF06778 Chlorite dismutase NZD89_13610 PF07687 Peptidase dimerisation domain NZD89_13610 PF01546 Peptidase family M20/M25/M40 NZD89_13640 PF01967 MoaC family NZD89_13645 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NZD89_13645 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NZD89_13650 PF04055 Radical SAM superfamily NZD89_13650 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NZD89_13655 PF03099 Biotin/lipoate A/B protein ligase family NZD89_13660 PF01642 Methylmalonyl-CoA mutase NZD89_13660 PF02310 B12 binding domain NZD89_13670 PF01039 Carboxyl transferase domain NZD89_13675 PF07687 Peptidase dimerisation domain NZD89_13675 PF01546 Peptidase family M20/M25/M40 NZD89_13680 PF00324 Amino acid permease NZD89_13685 PF00293 NUDIX domain NZD89_13695 PF01944 Stage II sporulation protein M NZD89_13710 PF00589 Phage integrase family NZD89_13710 PF02899 Phage integrase, N-terminal SAM-like domain NZD89_13715 PF01676 Metalloenzyme superfamily NZD89_13720 PF07943 Penicillin-binding protein 5, C-terminal domain NZD89_13720 PF00768 D-alanyl-D-alanine carboxypeptidase NZD89_13730 PF01740 STAS domain NZD89_13735 PF13581 Histidine kinase-like ATPase domain NZD89_13740 PF04542 Sigma-70 region 2 NZD89_13740 PF04539 Sigma-70 region 3 NZD89_13740 PF04545 Sigma-70, region 4 NZD89_13745 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NZD89_13750 PF07451 Stage V sporulation protein AD (SpoVAD) NZD89_13755 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NZD89_13760 PF14097 Stage V sporulation protein AE1 NZD89_13775 PF02163 Peptidase family M50 NZD89_13780 PF02616 Segregation and condensation protein ScpA NZD89_13785 PF04079 Segregation and condensation complex subunit ScpB NZD89_13795 PF09579 Sporulation protein YtfJ (Spore_YtfJ) NZD89_13800 PF07670 Nucleoside recognition NZD89_13805 PF07670 Nucleoside recognition NZD89_13810 PF01479 S4 domain NZD89_13810 PF00849 RNA pseudouridylate synthase NZD89_13820 PF00486 Transcriptional regulatory protein, C terminal NZD89_13820 PF00072 Response regulator receiver domain NZD89_13825 PF00989 PAS fold NZD89_13825 PF00672 HAMP domain NZD89_13825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_13825 PF18698 Histidine kinase sensor domain NZD89_13825 PF00512 His Kinase A (phospho-acceptor) domain NZD89_13840 PF02146 Sir2 family NZD89_13850 PF13367 PrsW family intramembrane metalloprotease NZD89_13865 PF13180 PDZ domain NZD89_13870 PF00581 Rhodanese-like domain NZD89_13880 PF01209 ubiE/COQ5 methyltransferase family NZD89_13890 PF13361 UvrD-like helicase C-terminal domain NZD89_13890 PF00580 UvrD/REP helicase N-terminal domain NZD89_13910 PF14659 Phage integrase, N-terminal SAM-like domain NZD89_13910 PF00589 Phage integrase family NZD89_13915 PF00107 Zinc-binding dehydrogenase NZD89_13915 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_13920 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_13920 PF00107 Zinc-binding dehydrogenase NZD89_13935 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NZD89_13935 PF08666 SAF domain NZD89_13940 PF00180 Isocitrate/isopropylmalate dehydrogenase NZD89_13940 PF03737 Aldolase/RraA NZD89_13945 PF07690 Major Facilitator Superfamily NZD89_13950 PF13378 Enolase C-terminal domain-like NZD89_13950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NZD89_13955 PF09339 IclR helix-turn-helix domain NZD89_13955 PF01614 Bacterial transcriptional regulator NZD89_13975 PF01557 Fumarylacetoacetate (FAA) hydrolase family NZD89_13985 PF00005 ABC transporter NZD89_13990 PF02653 Branched-chain amino acid transport system / permease component NZD89_13995 PF02653 Branched-chain amino acid transport system / permease component NZD89_14005 PF00501 AMP-binding enzyme NZD89_14005 PF13193 AMP-binding enzyme C-terminal domain NZD89_14010 PF13378 Enolase C-terminal domain-like NZD89_14010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NZD89_14025 PF02515 CoA-transferase family III NZD89_14045 PF07729 FCD domain NZD89_14045 PF00392 Bacterial regulatory proteins, gntR family NZD89_14050 PF05336 L-rhamnose mutarotase NZD89_14060 PF01695 IstB-like ATP binding protein NZD89_14065 PF00665 Integrase core domain NZD89_14065 PF02796 Helix-turn-helix domain of resolvase NZD89_14080 PF01609 Transposase DDE domain NZD89_14105 PF00583 Acetyltransferase (GNAT) family NZD89_14105 PF13673 Acetyltransferase (GNAT) domain NZD89_14120 PF00300 Histidine phosphatase superfamily (branch 1) NZD89_14160 PF00106 short chain dehydrogenase NZD89_14165 PF01553 Acyltransferase NZD89_14170 PF00781 Diacylglycerol kinase catalytic domain NZD89_14175 PF13439 Glycosyltransferase Family 4 NZD89_14175 PF00534 Glycosyl transferases group 1 NZD89_14235 PF02371 Transposase IS116/IS110/IS902 family NZD89_14235 PF01548 Transposase NZD89_14250 PF01548 Transposase NZD89_14250 PF02371 Transposase IS116/IS110/IS902 family NZD89_14255 PF01636 Phosphotransferase enzyme family NZD89_14265 PF00455 DeoR C terminal sensor domain NZD89_14265 PF08220 DeoR-like helix-turn-helix domain NZD89_14270 PF00083 Sugar (and other) transporter NZD89_14275 PF00171 Aldehyde dehydrogenase family NZD89_14280 PF04962 KduI/IolB family NZD89_14285 PF00294 pfkB family carbohydrate kinase NZD89_14290 PF00205 Thiamine pyrophosphate enzyme, central domain NZD89_14290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NZD89_14290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NZD89_14295 PF01261 Xylose isomerase-like TIM barrel NZD89_14300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_14300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_14305 PF01261 Xylose isomerase-like TIM barrel NZD89_14310 PF01261 Xylose isomerase-like TIM barrel NZD89_14315 PF01116 Fructose-bisphosphate aldolase class-II NZD89_14320 PF01261 Xylose isomerase-like TIM barrel NZD89_14350 PF00589 Phage integrase family NZD89_14350 PF02899 Phage integrase, N-terminal SAM-like domain NZD89_14360 PF00580 UvrD/REP helicase N-terminal domain NZD89_14360 PF13361 UvrD-like helicase C-terminal domain NZD89_14390 PF00356 Bacterial regulatory proteins, lacI family NZD89_14395 PF01546 Peptidase family M20/M25/M40 NZD89_14400 PF05389 Negative regulator of genetic competence (MecA) NZD89_14405 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NZD89_14405 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NZD89_14415 PF07486 Cell Wall Hydrolase NZD89_14415 PF01471 Putative peptidoglycan binding domain NZD89_14420 PF14620 YpeB sporulation NZD89_14435 PF02224 Cytidylate kinase NZD89_14450 PF00575 S1 RNA binding domain NZD89_14465 PF01926 50S ribosome-binding GTPase NZD89_14465 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NZD89_14470 PF02660 Glycerol-3-phosphate acyltransferase NZD89_14475 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NZD89_14475 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NZD89_14480 PF01597 Glycine cleavage H-protein NZD89_14485 PF09547 Stage IV sporulation protein A (spore_IV_A) NZD89_14495 PF02081 Tryptophan RNA-binding attenuator protein NZD89_14505 PF01209 ubiE/COQ5 methyltransferase family NZD89_14510 PF00348 Polyprenyl synthetase NZD89_14515 PF00334 Nucleoside diphosphate kinase NZD89_14520 PF01734 Patatin-like phospholipase NZD89_14525 PF01739 CheR methyltransferase, SAM binding domain NZD89_14525 PF03705 CheR methyltransferase, all-alpha domain NZD89_14530 PF01522 Polysaccharide deacetylase NZD89_14540 PF17092 Penicillin-binding protein OB-like domain NZD89_14540 PF00912 Transglycosylase NZD89_14540 PF00905 Penicillin binding protein transpeptidase domain NZD89_14545 PF00364 Biotin-requiring enzyme NZD89_14545 PF02817 e3 binding domain NZD89_14545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NZD89_14550 PF01566 Natural resistance-associated macrophage protein NZD89_14555 PF00999 Sodium/hydrogen exchanger family NZD89_14560 PF00239 Resolvase, N terminal domain NZD89_14560 PF02796 Helix-turn-helix domain of resolvase NZD89_14575 PF02898 Nitric oxide synthase, oxygenase domain NZD89_14600 PF07728 AAA domain (dynein-related subfamily) NZD89_14605 PF00092 von Willebrand factor type A domain NZD89_14610 PF01476 LysM domain NZD89_14610 PF00877 NlpC/P60 family NZD89_14610 PF08239 Bacterial SH3 domain NZD89_14620 PF00248 Aldo/keto reductase family NZD89_14630 PF00849 RNA pseudouridylate synthase NZD89_14630 PF01479 S4 domain NZD89_14635 PF05343 M42 glutamyl aminopeptidase NZD89_14640 PF05343 M42 glutamyl aminopeptidase NZD89_14645 PF05343 M42 glutamyl aminopeptidase NZD89_14650 PF01264 Chorismate synthase NZD89_14655 PF01761 3-dehydroquinate synthase NZD89_14660 PF07736 Chorismate mutase type I NZD89_14665 PF00591 Glycosyl transferase family, a/b domain NZD89_14665 PF02885 Glycosyl transferase family, helical bundle domain NZD89_14670 PF00218 Indole-3-glycerol phosphate synthase NZD89_14675 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NZD89_14680 PF00291 Pyridoxal-phosphate dependent enzyme NZD89_14685 PF00290 Tryptophan synthase alpha chain NZD89_14690 PF18152 DAHP synthase ferredoxin-like domain NZD89_14690 PF00793 DAHP synthetase I family NZD89_14710 PF08864 UPF0302 domain NZD89_14710 PF08858 IDEAL domain NZD89_14715 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NZD89_14715 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NZD89_14725 PF02673 Bacitracin resistance protein BacA NZD89_14730 PF07670 Nucleoside recognition NZD89_14735 PF03819 MazG nucleotide pyrophosphohydrolase domain NZD89_14745 PF05173 Dihydrodipicolinate reductase, C-terminus NZD89_14745 PF01113 Dihydrodipicolinate reductase, N-terminus NZD89_14750 PF00534 Glycosyl transferases group 1 NZD89_14750 PF13439 Glycosyltransferase Family 4 NZD89_14755 PF03099 Biotin/lipoate A/B protein ligase family NZD89_14755 PF08279 HTH domain NZD89_14755 PF02237 Biotin protein ligase C terminal domain NZD89_14765 PF13307 Helicase C-terminal domain NZD89_14765 PF04851 Type III restriction enzyme, res subunit NZD89_14765 PF00929 Exonuclease NZD89_14770 PF02735 Ku70/Ku80 beta-barrel domain NZD89_14775 PF01068 ATP dependent DNA ligase domain NZD89_14780 PF01048 Phosphorylase superfamily NZD89_14785 PF01008 Initiation factor 2 subunit family NZD89_14790 PF01979 Amidohydrolase family NZD89_14800 PF01975 Survival protein SurE NZD89_14805 PF14084 Protein of unknown function (DUF4264) NZD89_14820 PF01434 Peptidase family M41 NZD89_14820 PF17862 AAA+ lid domain NZD89_14820 PF00004 ATPase family associated with various cellular activities (AAA) NZD89_14825 PF00152 tRNA synthetases class II (D, K and N) NZD89_14825 PF01336 OB-fold nucleic acid binding domain NZD89_14830 PF07261 Replication initiation and membrane attachment NZD89_14835 PF16363 GDP-mannose 4,6 dehydratase NZD89_14840 PF07478 D-ala D-ala ligase C-terminus NZD89_14840 PF01820 D-ala D-ala ligase N-terminus NZD89_14845 PF02875 Mur ligase family, glutamate ligase domain NZD89_14845 PF01225 Mur ligase family, catalytic domain NZD89_14845 PF08245 Mur ligase middle domain NZD89_14855 PF07676 WD40-like Beta Propeller Repeat NZD89_14855 PF00326 Prolyl oligopeptidase family NZD89_14870 PF01588 Putative tRNA binding domain NZD89_14875 PF01566 Natural resistance-associated macrophage protein NZD89_14890 PF01931 Protein of unknown function DUF84 NZD89_14895 PF00221 Aromatic amino acid lyase NZD89_14900 PF00155 Aminotransferase class I and II NZD89_14905 PF00676 Dehydrogenase E1 component NZD89_14910 PF02779 Transketolase, pyrimidine binding domain NZD89_14910 PF02780 Transketolase, C-terminal domain NZD89_14915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NZD89_14915 PF00364 Biotin-requiring enzyme NZD89_14915 PF02817 e3 binding domain NZD89_14920 PF17932 Tetracyclin repressor-like, C-terminal domain NZD89_14920 PF00440 Bacterial regulatory proteins, tetR family NZD89_14925 PF05138 Phenylacetic acid catabolic protein NZD89_14940 PF01883 Iron-sulfur cluster assembly protein NZD89_14950 PF00378 Enoyl-CoA hydratase/isomerase NZD89_14960 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NZD89_14970 PF00255 Glutathione peroxidase NZD89_14975 PF01175 Urocanase Rossmann-like domain NZD89_14975 PF17391 Urocanase N-terminal domain NZD89_14975 PF17392 Urocanase C-terminal domain NZD89_14980 PF01979 Amidohydrolase family NZD89_14985 PF01546 Peptidase family M20/M25/M40 NZD89_14990 PF01979 Amidohydrolase family NZD89_14995 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NZD89_15005 PF00561 alpha/beta hydrolase fold NZD89_15010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NZD89_15010 PF00384 Molybdopterin oxidoreductase NZD89_15010 PF01568 Molydopterin dinucleotide binding domain NZD89_15015 PF01321 Creatinase/Prolidase N-terminal domain NZD89_15015 PF00557 Metallopeptidase family M24 NZD89_15020 PF01381 Helix-turn-helix NZD89_15025 PF05378 Hydantoinase/oxoprolinase N-terminal region NZD89_15025 PF01968 Hydantoinase/oxoprolinase NZD89_15030 PF02538 Hydantoinase B/oxoprolinase NZD89_15035 PF07690 Major Facilitator Superfamily NZD89_15040 PF02538 Hydantoinase B/oxoprolinase NZD89_15050 PF05378 Hydantoinase/oxoprolinase N-terminal region NZD89_15050 PF01968 Hydantoinase/oxoprolinase NZD89_15055 PF02538 Hydantoinase B/oxoprolinase NZD89_15065 PF01177 Asp/Glu/Hydantoin racemase NZD89_15075 PF00455 DeoR C terminal sensor domain NZD89_15075 PF08220 DeoR-like helix-turn-helix domain NZD89_15080 PF00171 Aldehyde dehydrogenase family NZD89_15085 PF04962 KduI/IolB family NZD89_15090 PF00294 pfkB family carbohydrate kinase NZD89_15095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NZD89_15095 PF00205 Thiamine pyrophosphate enzyme, central domain NZD89_15095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NZD89_15100 PF01261 Xylose isomerase-like TIM barrel NZD89_15105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_15105 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_15110 PF01116 Fructose-bisphosphate aldolase class-II NZD89_15115 PF00756 Putative esterase NZD89_15115 PF01476 LysM domain NZD89_15170 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_15170 PF00107 Zinc-binding dehydrogenase NZD89_15180 PF01609 Transposase DDE domain NZD89_15195 PF13416 Bacterial extracellular solute-binding protein NZD89_15200 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_15205 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_15270 PF00483 Nucleotidyl transferase NZD89_15280 PF02348 Cytidylyltransferase NZD89_15295 PF08666 SAF domain NZD89_15295 PF03102 NeuB family NZD89_15300 PF02350 UDP-N-acetylglucosamine 2-epimerase NZD89_15305 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NZD89_15310 PF16363 GDP-mannose 4,6 dehydratase NZD89_15320 PF00005 ABC transporter NZD89_15325 PF00005 ABC transporter NZD89_15335 PF00356 Bacterial regulatory proteins, lacI family NZD89_15355 PF03773 Predicted permease NZD89_15380 PF01522 Polysaccharide deacetylase NZD89_15390 PF00625 Guanylate kinase NZD89_15395 PF13439 Glycosyltransferase Family 4 NZD89_15395 PF00534 Glycosyl transferases group 1 NZD89_15400 PF01910 Thiamine-binding protein NZD89_15415 PF13439 Glycosyltransferase Family 4 NZD89_15420 PF04299 Putative FMN-binding domain NZD89_15425 PF00392 Bacterial regulatory proteins, gntR family NZD89_15425 PF00155 Aminotransferase class I and II NZD89_15435 PF08281 Sigma-70, region 4 NZD89_15435 PF04542 Sigma-70 region 2 NZD89_15440 PF00300 Histidine phosphatase superfamily (branch 1) NZD89_15455 PF01810 LysE type translocator NZD89_15470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_15470 PF00512 His Kinase A (phospho-acceptor) domain NZD89_15475 PF07944 Beta-L-arabinofuranosidase, GH127 NZD89_15480 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_15485 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_15510 PF00107 Zinc-binding dehydrogenase NZD89_15510 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_15515 PF00866 Ring hydroxylating beta subunit NZD89_15520 PF00355 Rieske [2Fe-2S] domain NZD89_15520 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NZD89_15525 PF07690 Major Facilitator Superfamily NZD89_15530 PF00561 alpha/beta hydrolase fold NZD89_15530 PF00364 Biotin-requiring enzyme NZD89_15540 PF01042 Endoribonuclease L-PSP NZD89_15545 PF00970 Oxidoreductase FAD-binding domain NZD89_15545 PF00111 2Fe-2S iron-sulfur cluster binding domain NZD89_15545 PF00175 Oxidoreductase NAD-binding domain NZD89_15560 PF12833 Helix-turn-helix domain NZD89_15560 PF02311 AraC-like ligand binding domain NZD89_15570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_15570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_15580 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_15585 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_15590 PF01547 Bacterial extracellular solute-binding protein NZD89_15595 PF00107 Zinc-binding dehydrogenase NZD89_15595 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_15600 PF05025 RbsD / FucU transport protein family NZD89_15605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NZD89_15605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NZD89_15610 PF05025 RbsD / FucU transport protein family NZD89_15615 PF00248 Aldo/keto reductase family NZD89_15620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_15620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_15635 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_15640 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_15665 PF06445 GyrI-like small molecule binding domain NZD89_15665 PF12833 Helix-turn-helix domain NZD89_15680 PF12833 Helix-turn-helix domain NZD89_15685 PF02589 LUD domain NZD89_15690 PF02589 LUD domain NZD89_15690 PF11870 Domain of unknown function (DUF3390) NZD89_15690 PF13183 4Fe-4S dicluster domain NZD89_15695 PF02754 Cysteine-rich domain NZD89_15700 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_15700 PF00107 Zinc-binding dehydrogenase NZD89_15705 PF13407 Periplasmic binding protein domain NZD89_15710 PF02653 Branched-chain amino acid transport system / permease component NZD89_15715 PF00005 ABC transporter NZD89_15720 PF04199 Putative cyclase NZD89_15745 PF12833 Helix-turn-helix domain NZD89_15790 PF14583 Oligogalacturonate lyase NZD89_15795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_15795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_15805 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_15810 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_15815 PF01261 Xylose isomerase-like TIM barrel NZD89_15820 PF12833 Helix-turn-helix domain NZD89_15825 PF01842 ACT domain NZD89_15825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NZD89_15825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NZD89_15840 PF05721 Phytanoyl-CoA dioxygenase (PhyH) NZD89_15855 PF00107 Zinc-binding dehydrogenase NZD89_15855 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_15860 PF00294 pfkB family carbohydrate kinase NZD89_15865 PF01596 O-methyltransferase NZD89_15880 PF17863 AAA lid domain NZD89_15880 PF07726 ATPase family associated with various cellular activities (AAA) NZD89_15900 PF00664 ABC transporter transmembrane region NZD89_15900 PF00005 ABC transporter NZD89_15915 PF00483 Nucleotidyl transferase NZD89_15915 PF01050 Mannose-6-phosphate isomerase NZD89_15920 PF00483 Nucleotidyl transferase NZD89_15925 PF00664 ABC transporter transmembrane region NZD89_15925 PF00005 ABC transporter NZD89_15930 PF00005 ABC transporter NZD89_15930 PF00664 ABC transporter transmembrane region NZD89_15955 PF16363 GDP-mannose 4,6 dehydratase NZD89_15965 PF00534 Glycosyl transferases group 1 NZD89_15965 PF13439 Glycosyltransferase Family 4 NZD89_15995 PF00534 Glycosyl transferases group 1 NZD89_16000 PF02585 GlcNAc-PI de-N-acetylase NZD89_16005 PF00534 Glycosyl transferases group 1 NZD89_16005 PF08323 Starch synthase catalytic domain NZD89_16015 PF00534 Glycosyl transferases group 1 NZD89_16020 PF00534 Glycosyl transferases group 1 NZD89_16020 PF13439 Glycosyltransferase Family 4 NZD89_16025 PF13439 Glycosyltransferase Family 4 NZD89_16025 PF00534 Glycosyl transferases group 1 NZD89_16030 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NZD89_16030 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NZD89_16030 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NZD89_16040 PF02397 Bacterial sugar transferase NZD89_16045 PF08671 Anti-repressor SinI NZD89_16045 PF01381 Helix-turn-helix NZD89_16050 PF13614 AAA domain NZD89_16065 PF08671 Anti-repressor SinI NZD89_16065 PF01381 Helix-turn-helix NZD89_16090 PF02585 GlcNAc-PI de-N-acetylase NZD89_16095 PF16363 GDP-mannose 4,6 dehydratase NZD89_16110 PF00884 Sulfatase NZD89_16115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_16115 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_16125 PF16347 Domain of unknown function (DUF4976) NZD89_16125 PF00884 Sulfatase NZD89_16130 PF07690 Major Facilitator Superfamily NZD89_16135 PF07690 Major Facilitator Superfamily NZD89_16145 PF01497 Periplasmic binding protein NZD89_16145 PF12833 Helix-turn-helix domain NZD89_16150 PF00884 Sulfatase NZD89_16150 PF16385 Domain of unknown function NZD89_16155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_16155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_16160 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NZD89_16165 PF00171 Aldehyde dehydrogenase family NZD89_16175 PF01053 Cys/Met metabolism PLP-dependent enzyme NZD89_16180 PF01546 Peptidase family M20/M25/M40 NZD89_16180 PF07687 Peptidase dimerisation domain NZD89_16185 PF02423 Ornithine cyclodeaminase/mu-crystallin family NZD89_16190 PF01321 Creatinase/Prolidase N-terminal domain NZD89_16190 PF00557 Metallopeptidase family M24 NZD89_16195 PF00291 Pyridoxal-phosphate dependent enzyme NZD89_16200 PF06018 CodY GAF-like domain NZD89_16200 PF17853 GGDEF-like domain NZD89_16200 PF13556 PucR C-terminal helix-turn-helix domain NZD89_16205 PF13536 Putative multidrug resistance efflux transporter NZD89_16210 PF01638 HxlR-like helix-turn-helix NZD89_16215 PF00248 Aldo/keto reductase family NZD89_16220 PF00248 Aldo/keto reductase family NZD89_16265 PF00764 Arginosuccinate synthase NZD89_16270 PF01960 ArgJ family NZD89_16275 PF00156 Phosphoribosyl transferase domain NZD89_16295 PF01614 Bacterial transcriptional regulator NZD89_16295 PF09339 IclR helix-turn-helix domain NZD89_16300 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NZD89_16300 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NZD89_16305 PF01098 Cell cycle protein NZD89_16330 PF00491 Arginase family NZD89_16335 PF00202 Aminotransferase class-III NZD89_16340 PF00155 Aminotransferase class I and II NZD89_16345 PF01266 FAD dependent oxidoreductase NZD89_16345 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NZD89_16350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NZD89_16350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NZD89_16355 PF04309 Glycerol-3-phosphate responsive antiterminator NZD89_16360 PF01380 SIS domain NZD89_16360 PF00571 CBS domain NZD89_16365 PF01266 FAD dependent oxidoreductase NZD89_16370 PF00480 ROK family NZD89_16370 PF01047 MarR family NZD89_16395 PF01381 Helix-turn-helix NZD89_16395 PF07883 Cupin domain NZD89_16400 PF01810 LysE type translocator NZD89_16415 PF00266 Aminotransferase class-V NZD89_16420 PF00202 Aminotransferase class-III NZD89_16425 PF13419 Haloacid dehalogenase-like hydrolase NZD89_16430 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_16435 PF08402 TOBE domain NZD89_16435 PF00005 ABC transporter NZD89_16440 PF01547 Bacterial extracellular solute-binding protein NZD89_16445 PF00455 DeoR C terminal sensor domain NZD89_16445 PF08220 DeoR-like helix-turn-helix domain NZD89_16455 PF04073 Aminoacyl-tRNA editing domain NZD89_16460 PF04073 Aminoacyl-tRNA editing domain NZD89_16480 PF03358 NADPH-dependent FMN reductase NZD89_16485 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_16490 PF09084 NMT1/THI5 like NZD89_16495 PF00005 ABC transporter NZD89_16500 PF00296 Luciferase-like monooxygenase NZD89_16505 PF00296 Luciferase-like monooxygenase NZD89_16515 PF10055 Uncharacterized small protein (DUF2292) NZD89_16520 PF04239 Protein of unknown function (DUF421) NZD89_16525 PF00186 Dihydrofolate reductase NZD89_16535 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_16540 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_16545 PF01547 Bacterial extracellular solute-binding protein NZD89_16550 PF00356 Bacterial regulatory proteins, lacI family NZD89_16560 PF00990 Diguanylate cyclase, GGDEF domain NZD89_16560 PF08448 PAS fold NZD89_16565 PF13460 NAD(P)H-binding NZD89_16585 PF13419 Haloacid dehalogenase-like hydrolase NZD89_16590 PF02371 Transposase IS116/IS110/IS902 family NZD89_16590 PF01548 Transposase NZD89_16595 PF13302 Acetyltransferase (GNAT) domain NZD89_16600 PF09297 NADH pyrophosphatase zinc ribbon domain NZD89_16600 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NZD89_16600 PF00293 NUDIX domain NZD89_16605 PF13673 Acetyltransferase (GNAT) domain NZD89_16605 PF00583 Acetyltransferase (GNAT) family NZD89_16655 PF00291 Pyridoxal-phosphate dependent enzyme NZD89_16660 PF17885 Styrene monooxygenase A putative substrate binding domain NZD89_16675 PF00282 Pyridoxal-dependent decarboxylase conserved domain NZD89_16685 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_16690 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_16695 PF01547 Bacterial extracellular solute-binding protein NZD89_16700 PF00356 Bacterial regulatory proteins, lacI family NZD89_16710 PF03009 Glycerophosphoryl diester phosphodiesterase family NZD89_16720 PF00083 Sugar (and other) transporter NZD89_16725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NZD89_16725 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NZD89_16740 PF04343 Protein of unknown function, DUF488 NZD89_16750 PF07687 Peptidase dimerisation domain NZD89_16750 PF01546 Peptidase family M20/M25/M40 NZD89_16755 PF13378 Enolase C-terminal domain-like NZD89_16755 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NZD89_16760 PF00324 Amino acid permease NZD89_16785 PF01695 IstB-like ATP binding protein NZD89_16790 PF00583 Acetyltransferase (GNAT) family NZD89_16795 PF17992 Agarase CBM like domain NZD89_16810 PF02929 Beta galactosidase small chain NZD89_16810 PF16353 Domain of unknown function(DUF4981) NZD89_16810 PF00703 Glycosyl hydrolases family 2 NZD89_16810 PF02837 Glycosyl hydrolases family 2, sugar binding domain NZD89_16810 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NZD89_16820 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_16825 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_16835 PF00356 Bacterial regulatory proteins, lacI family NZD89_16840 PF00248 Aldo/keto reductase family NZD89_16850 PF01548 Transposase NZD89_16850 PF02371 Transposase IS116/IS110/IS902 family NZD89_16875 PF00480 ROK family NZD89_16880 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NZD89_16885 PF13302 Acetyltransferase (GNAT) domain NZD89_16895 PF05199 GMC oxidoreductase NZD89_16895 PF00732 GMC oxidoreductase NZD89_16900 PF01230 HIT domain NZD89_16905 PF03323 Bacillus/Clostridium GerA spore germination protein NZD89_16910 PF05504 Spore germination B3/ GerAC like, C-terminal NZD89_16915 PF03845 Spore germination protein NZD89_16925 PF03466 LysR substrate binding domain NZD89_16925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_16930 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NZD89_16940 PF02441 Flavoprotein NZD89_16950 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NZD89_16965 PF02979 Nitrile hydratase, alpha chain NZD89_16970 PF02211 Nitrile hydratase beta subunit NZD89_16975 PF07690 Major Facilitator Superfamily NZD89_16980 PF00857 Isochorismatase family NZD89_17000 PF00563 EAL domain NZD89_17000 PF00990 Diguanylate cyclase, GGDEF domain NZD89_17000 PF08447 PAS fold NZD89_17000 PF08448 PAS fold NZD89_17005 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain NZD89_17005 PF00730 HhH-GPD superfamily base excision DNA repair protein NZD89_17015 PF13520 Amino acid permease NZD89_17020 PF03447 Homoserine dehydrogenase, NAD binding domain NZD89_17020 PF01842 ACT domain NZD89_17020 PF00742 Homoserine dehydrogenase NZD89_17025 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain NZD89_17025 PF06165 Glycosyltransferase family 36 NZD89_17025 PF10091 Putative glucoamylase NZD89_17040 PF00563 EAL domain NZD89_17040 PF13185 GAF domain NZD89_17040 PF00990 Diguanylate cyclase, GGDEF domain NZD89_17050 PF00378 Enoyl-CoA hydratase/isomerase NZD89_17060 PF02574 Homocysteine S-methyltransferase NZD89_17060 PF02219 Methylenetetrahydrofolate reductase NZD89_17065 PF02607 B12 binding domain NZD89_17065 PF02310 B12 binding domain NZD89_17065 PF02965 Vitamin B12 dependent methionine synthase, activation domain NZD89_17065 PF02574 Homocysteine S-methyltransferase NZD89_17065 PF00809 Pterin binding enzyme NZD89_17085 PF03129 Anticodon binding domain NZD89_17085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NZD89_17095 PF01726 LexA DNA binding domain NZD89_17095 PF00717 Peptidase S24-like NZD89_17100 PF00120 Glutamine synthetase, catalytic domain NZD89_17100 PF03951 Glutamine synthetase, beta-Grasp domain NZD89_17105 PF13411 MerR HTH family regulatory protein NZD89_17110 PF06838 Methionine gamma-lyase NZD89_17115 PF01926 50S ribosome-binding GTPase NZD89_17115 PF13167 GTP-binding GTPase N-terminal NZD89_17115 PF16360 GTP-binding GTPase Middle Region NZD89_17130 PF09269 Domain of unknown function (DUF1967) NZD89_17130 PF01018 GTP1/OBG NZD89_17130 PF01926 50S ribosome-binding GTPase NZD89_17135 PF00004 ATPase family associated with various cellular activities (AAA) NZD89_17135 PF17866 AAA lid domain NZD89_17140 PF00239 Resolvase, N terminal domain NZD89_17140 PF07508 Recombinase NZD89_17140 PF13408 Recombinase zinc beta ribbon domain NZD89_17160 PF03323 Bacillus/Clostridium GerA spore germination protein NZD89_17165 PF03458 UPF0126 domain NZD89_17170 PF00596 Class II Aldolase and Adducin N-terminal domain NZD89_17180 PF03824 High-affinity nickel-transport protein NZD89_17210 PF06277 Ethanolamine utilisation protein EutA NZD89_17255 PF17209 Hfq protein NZD89_17265 PF04445 Putative SAM-dependent methyltransferase NZD89_17270 PF08676 MutL C terminal dimerisation domain NZD89_17270 PF01119 DNA mismatch repair protein, C-terminal domain NZD89_17275 PF05190 MutS family domain IV NZD89_17275 PF05188 MutS domain II NZD89_17275 PF01624 MutS domain I NZD89_17275 PF05192 MutS domain III NZD89_17275 PF00488 MutS domain V NZD89_17285 PF00919 Uncharacterized protein family UPF0004 NZD89_17285 PF01938 TRAM domain NZD89_17285 PF04055 Radical SAM superfamily NZD89_17305 PF14398 YheC/D like ATP-grasp NZD89_17310 PF14398 YheC/D like ATP-grasp NZD89_17315 PF00989 PAS fold NZD89_17315 PF00512 His Kinase A (phospho-acceptor) domain NZD89_17315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_17330 PF00239 Resolvase, N terminal domain NZD89_17330 PF02796 Helix-turn-helix domain of resolvase NZD89_17345 PF04232 Stage V sporulation protein S (SpoVS) NZD89_17350 PF13277 YmdB-like protein NZD89_17355 PF12072 Domain of unknown function (DUF3552) NZD89_17355 PF00013 KH domain NZD89_17355 PF01966 HD domain NZD89_17360 PF02631 RecX family NZD89_17365 PF00154 recA bacterial DNA recombination protein NZD89_17370 PF00270 DEAD/DEAH box helicase NZD89_17370 PF00271 Helicase conserved C-terminal domain NZD89_17375 PF18146 Damage-inducible protein CinA KH domain NZD89_17375 PF00994 Probable molybdopterin binding domain NZD89_17375 PF02464 Competence-damaged protein NZD89_17380 PF01066 CDP-alcohol phosphatidyltransferase NZD89_17385 PF04461 Protein of unknown function (DUF520) NZD89_17390 PF13464 Domain of unknown function (DUF4115) NZD89_17395 PF11868 Protein of unknown function (DUF3388) NZD89_17415 PF17854 FtsK alpha domain NZD89_17415 PF09397 Ftsk gamma domain NZD89_17415 PF01580 FtsK/SpoIIIE family NZD89_17430 PF00574 Clp protease NZD89_17435 PF00753 Metallo-beta-lactamase superfamily NZD89_17435 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NZD89_17435 PF17770 Ribonuclease J C-terminal domain NZD89_17440 PF00701 Dihydrodipicolinate synthetase family NZD89_17445 PF00696 Amino acid kinase family NZD89_17445 PF13840 ACT domain NZD89_17450 PF01118 Semialdehyde dehydrogenase, NAD binding domain NZD89_17450 PF02774 Semialdehyde dehydrogenase, dimerisation domain NZD89_17455 PF02441 Flavoprotein NZD89_17460 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NZD89_17460 PF16924 Dipicolinate synthase subunit A N-terminal domain NZD89_17465 PF00692 dUTPase NZD89_17470 PF00675 Insulinase (Peptidase family M16) NZD89_17470 PF05193 Peptidase M16 inactive domain NZD89_17475 PF01522 Polysaccharide deacetylase NZD89_17480 PF00575 S1 RNA binding domain NZD89_17480 PF00013 KH domain NZD89_17480 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NZD89_17480 PF01138 3' exoribonuclease family, domain 1 NZD89_17480 PF03725 3' exoribonuclease family, domain 2 NZD89_17485 PF00312 Ribosomal protein S15 NZD89_17490 PF01687 Riboflavin kinase NZD89_17490 PF06574 FAD synthetase NZD89_17495 PF09142 tRNA Pseudouridine synthase II, C terminal NZD89_17495 PF01509 TruB family pseudouridylate synthase (N terminal domain) NZD89_17495 PF16198 tRNA pseudouridylate synthase B C-terminal domain NZD89_17500 PF02272 DHHA1 domain NZD89_17500 PF01368 DHH family NZD89_17505 PF02033 Ribosome-binding factor A NZD89_17510 PF00009 Elongation factor Tu GTP binding domain NZD89_17510 PF11987 Translation-initiation factor 2 NZD89_17510 PF04760 Translation initiation factor IF-2, N-terminal region NZD89_17510 PF00009 Elongation factor Tu GTP binding domain NZD89_17510 PF04760 Translation initiation factor IF-2, N-terminal region NZD89_17510 PF11987 Translation-initiation factor 2 NZD89_17515 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family NZD89_17520 PF04296 Protein of unknown function (DUF448) NZD89_17525 PF13184 NusA-like KH domain NZD89_17525 PF08529 NusA N-terminal domain NZD89_17525 PF00575 S1 RNA binding domain NZD89_17530 PF02576 RimP N-terminal domain NZD89_17530 PF17384 RimP C-terminal SH3 domain NZD89_17535 PF14492 Elongation Factor G, domain II NZD89_17535 PF00679 Elongation factor G C-terminus NZD89_17535 PF00009 Elongation factor Tu GTP binding domain NZD89_17535 PF03144 Elongation factor Tu domain 2 NZD89_17540 PF00800 Prephenate dehydratase NZD89_17540 PF01842 ACT domain NZD89_17545 PF02163 Peptidase family M50 NZD89_17545 PF13180 PDZ domain NZD89_17550 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NZD89_17550 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NZD89_17550 PF13288 DXP reductoisomerase C-terminal domain NZD89_17560 PF01255 Putative undecaprenyl diphosphate synthase NZD89_17565 PF01765 Ribosome recycling factor NZD89_17570 PF00696 Amino acid kinase family NZD89_17575 PF00889 Elongation factor TS NZD89_17580 PF00318 Ribosomal protein S2 NZD89_17590 PF03975 CheD chemotactic sensory transduction NZD89_17595 PF04509 CheC-like family NZD89_17600 PF01584 CheW-like domain NZD89_17605 PF01627 Hpt domain NZD89_17605 PF01584 CheW-like domain NZD89_17605 PF02895 Signal transducing histidine kinase, homodimeric domain NZD89_17605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_17605 PF07194 P2 response regulator binding domain NZD89_17610 PF00072 Response regulator receiver domain NZD89_17610 PF01339 CheB methylesterase NZD89_17615 PF10609 NUBPL iron-transfer P-loop NTPase NZD89_17620 PF00448 SRP54-type protein, GTPase domain NZD89_17625 PF00771 FHIPEP family NZD89_17630 PF01312 FlhB HrpN YscU SpaS Family NZD89_17635 PF01311 Bacterial export proteins, family 1 NZD89_17640 PF01313 Bacterial export proteins, family 3 NZD89_17645 PF00813 FliP family NZD89_17655 PF00072 Response regulator receiver domain NZD89_17660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NZD89_17660 PF04509 CheC-like family NZD89_17665 PF02154 Flagellar motor switch protein FliM NZD89_17665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NZD89_17680 PF00460 Flagella basal body rod protein NZD89_17680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NZD89_17710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NZD89_17710 PF02874 ATP synthase alpha/beta family, beta-barrel domain NZD89_17710 PF18269 T3SS EscN ATPase C-terminal domain NZD89_17720 PF14842 FliG N-terminal domain NZD89_17720 PF01706 FliG C-terminal domain NZD89_17720 PF14841 FliG middle domain NZD89_17725 PF08345 Flagellar M-ring protein C-terminal NZD89_17725 PF01514 Secretory protein of YscJ/FliF family NZD89_17730 PF02049 Flagellar hook-basal body complex protein FliE NZD89_17735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NZD89_17735 PF00460 Flagella basal body rod protein NZD89_17740 PF00460 Flagella basal body rod protein NZD89_17745 PF00004 ATPase family associated with various cellular activities (AAA) NZD89_17745 PF07724 AAA domain (Cdc48 subfamily) NZD89_17745 PF10431 C-terminal, D2-small domain, of ClpB protein NZD89_17750 PF00227 Proteasome subunit NZD89_17755 PF02899 Phage integrase, N-terminal SAM-like domain NZD89_17755 PF00589 Phage integrase family NZD89_17760 PF01134 Glucose inhibited division protein A NZD89_17765 PF01396 Topoisomerase DNA binding C4 zinc finger NZD89_17765 PF01751 Toprim domain NZD89_17765 PF01131 DNA topoisomerase NZD89_17785 PF13520 Amino acid permease NZD89_17790 PF02678 Pirin NZD89_17790 PF05726 Pirin C-terminal cupin domain NZD89_17805 PF00005 ABC transporter NZD89_17805 PF00664 ABC transporter transmembrane region NZD89_17810 PF00005 ABC transporter NZD89_17810 PF00664 ABC transporter transmembrane region NZD89_17825 PF13031 Protein of unknown function (DUF3892) NZD89_17835 PF03691 Uncharacterised protein family (UPF0167) NZD89_17840 PF09334 tRNA synthetases class I (M) NZD89_17845 PF09334 tRNA synthetases class I (M) NZD89_17845 PF08264 Anticodon-binding domain of tRNA NZD89_17855 PF00512 His Kinase A (phospho-acceptor) domain NZD89_17855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_17855 PF00672 HAMP domain NZD89_17860 PF00512 His Kinase A (phospho-acceptor) domain NZD89_17860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_17885 PF13407 Periplasmic binding protein domain NZD89_17890 PF02653 Branched-chain amino acid transport system / permease component NZD89_17895 PF00005 ABC transporter NZD89_17900 PF05025 RbsD / FucU transport protein family NZD89_17905 PF00356 Bacterial regulatory proteins, lacI family NZD89_17910 PF00294 pfkB family carbohydrate kinase NZD89_17920 PF03707 Bacterial signalling protein N terminal repeat NZD89_17920 PF00563 EAL domain NZD89_17920 PF00990 Diguanylate cyclase, GGDEF domain NZD89_17935 PF07690 Major Facilitator Superfamily NZD89_17940 PF03466 LysR substrate binding domain NZD89_17940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_17945 PF07690 Major Facilitator Superfamily NZD89_17975 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_17975 PF00107 Zinc-binding dehydrogenase NZD89_17980 PF00355 Rieske [2Fe-2S] domain NZD89_17985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_17985 PF03466 LysR substrate binding domain NZD89_17990 PF17782 DprA winged helix domain NZD89_17990 PF02481 DNA recombination-mediator protein A NZD89_17995 PF02629 CoA binding domain NZD89_17995 PF00549 CoA-ligase NZD89_18000 PF08442 ATP-grasp domain NZD89_18000 PF00549 CoA-ligase NZD89_18010 PF01078 Magnesium chelatase, subunit ChlI NZD89_18010 PF13335 Magnesium chelatase, subunit ChlI C-terminal NZD89_18025 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NZD89_18030 PF01548 Transposase NZD89_18030 PF02371 Transposase IS116/IS110/IS902 family NZD89_18045 PF02371 Transposase IS116/IS110/IS902 family NZD89_18045 PF01548 Transposase NZD89_18060 PF01548 Transposase NZD89_18060 PF02371 Transposase IS116/IS110/IS902 family NZD89_18075 PF14693 Ribosomal protein TL5, C-terminal domain NZD89_18075 PF01386 Ribosomal L25p family NZD89_18080 PF05598 Transposase domain (DUF772) NZD89_18100 PF13243 Squalene-hopene cyclase C-terminal domain NZD89_18100 PF13249 Squalene-hopene cyclase N-terminal domain NZD89_18110 PF01738 Dienelactone hydrolase family NZD89_18115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NZD89_18120 PF07681 DoxX NZD89_18125 PF01638 HxlR-like helix-turn-helix NZD89_18160 PF05504 Spore germination B3/ GerAC like, C-terminal NZD89_18165 PF03845 Spore germination protein NZD89_18170 PF03323 Bacillus/Clostridium GerA spore germination protein NZD89_18175 PF03323 Bacillus/Clostridium GerA spore germination protein NZD89_18190 PF02371 Transposase IS116/IS110/IS902 family NZD89_18190 PF01548 Transposase NZD89_18195 PF01548 Transposase NZD89_18195 PF02371 Transposase IS116/IS110/IS902 family NZD89_18200 PF01548 Transposase NZD89_18200 PF02371 Transposase IS116/IS110/IS902 family NZD89_18210 PF01712 Deoxynucleoside kinase NZD89_18215 PF13091 PLD-like domain NZD89_18215 PF13396 Phospholipase_D-nuclease N-terminal NZD89_18230 PF01695 IstB-like ATP binding protein NZD89_18235 PF02796 Helix-turn-helix domain of resolvase NZD89_18235 PF00665 Integrase core domain NZD89_18240 PF02371 Transposase IS116/IS110/IS902 family NZD89_18240 PF01548 Transposase NZD89_18260 PF12706 Beta-lactamase superfamily domain NZD89_18265 PF07690 Major Facilitator Superfamily NZD89_18270 PF00857 Isochorismatase family NZD89_18275 PF00440 Bacterial regulatory proteins, tetR family NZD89_18290 PF00583 Acetyltransferase (GNAT) family NZD89_18320 PF00905 Penicillin binding protein transpeptidase domain NZD89_18320 PF00912 Transglycosylase NZD89_18335 PF12708 Pectate lyase superfamily protein NZD89_18335 PF09992 Phosphodiester glycosidase NZD89_18340 PF00923 Transaldolase/Fructose-6-phosphate aldolase NZD89_18345 PF00342 Phosphoglucose isomerase NZD89_18365 PF00005 ABC transporter NZD89_18370 PF00196 Bacterial regulatory proteins, luxR family NZD89_18370 PF00072 Response regulator receiver domain NZD89_18375 PF07730 Histidine kinase NZD89_18380 PF13426 PAS domain NZD89_18380 PF13188 PAS domain NZD89_18380 PF00989 PAS fold NZD89_18380 PF00512 His Kinase A (phospho-acceptor) domain NZD89_18380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_18400 PF00989 PAS fold NZD89_18400 PF13188 PAS domain NZD89_18400 PF00512 His Kinase A (phospho-acceptor) domain NZD89_18400 PF13426 PAS domain NZD89_18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_18420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NZD89_18430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_18430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_18445 PF02311 AraC-like ligand binding domain NZD89_18445 PF12833 Helix-turn-helix domain NZD89_18475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NZD89_18490 PF07690 Major Facilitator Superfamily NZD89_18510 PF02021 Uncharacterised protein family UPF0102 NZD89_18515 PF01312 FlhB HrpN YscU SpaS Family NZD89_18525 PF01351 Ribonuclease HII NZD89_18530 PF01926 50S ribosome-binding GTPase NZD89_18535 PF01245 Ribosomal protein L19 NZD89_18560 PF03061 Thioesterase superfamily NZD89_18565 PF01551 Peptidase family M23 NZD89_18575 PF01479 S4 domain NZD89_18575 PF00849 RNA pseudouridylate synthase NZD89_18600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NZD89_18600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NZD89_18605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_18605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_18610 PF00324 Amino acid permease NZD89_18765 PF01746 tRNA (Guanine-1)-methyltransferase NZD89_18770 PF01782 RimM N-terminal domain NZD89_18770 PF05239 PRC-barrel domain NZD89_18785 PF00886 Ribosomal protein S16 NZD89_18790 PF02978 Signal peptide binding domain NZD89_18790 PF02881 SRP54-type protein, helical bundle domain NZD89_18790 PF00448 SRP54-type protein, GTPase domain NZD89_18795 PF04297 Putative helix-turn-helix protein, YlxM / p13 like NZD89_18800 PF02881 SRP54-type protein, helical bundle domain NZD89_18800 PF00448 SRP54-type protein, GTPase domain NZD89_18805 PF02463 RecF/RecN/SMC N terminal domain NZD89_18805 PF06470 SMC proteins Flexible Hinge Domain NZD89_18810 PF14622 Ribonuclease-III-like NZD89_18810 PF00035 Double-stranded RNA binding motif NZD89_18815 PF02801 Beta-ketoacyl synthase, C-terminal domain NZD89_18815 PF00109 Beta-ketoacyl synthase, N-terminal domain NZD89_18820 PF00550 Phosphopantetheine attachment site NZD89_18830 PF00698 Acyl transferase domain NZD89_18835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NZD89_18835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NZD89_18840 PF02504 Fatty acid synthesis protein NZD89_18845 PF01575 MaoC like domain NZD89_18850 PF01783 Ribosomal L32p protein family NZD89_18860 PF01734 Patatin-like phospholipase NZD89_18865 PF01467 Cytidylyltransferase-like NZD89_18880 PF01425 Amidase NZD89_18885 PF00534 Glycosyl transferases group 1 NZD89_18885 PF13439 Glycosyltransferase Family 4 NZD89_18890 PF02666 Phosphatidylserine decarboxylase NZD89_18895 PF03180 NLPA lipoprotein NZD89_18900 PF09383 NIL domain NZD89_18900 PF00005 ABC transporter NZD89_18905 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_18910 PF00269 Small, acid-soluble spore proteins, alpha/beta type NZD89_18915 PF17191 RecG wedge domain NZD89_18915 PF00271 Helicase conserved C-terminal domain NZD89_18915 PF00270 DEAD/DEAH box helicase NZD89_18925 PF00830 Ribosomal L28 family NZD89_18930 PF08183 Stage V sporulation protein family NZD89_18935 PF00834 Ribulose-phosphate 3 epimerase family NZD89_18940 PF03193 RsgA GTPase NZD89_18940 PF16745 RsgA N-terminal domain NZD89_18945 PF03793 PASTA domain NZD89_18945 PF00069 Protein kinase domain NZD89_18955 PF04055 Radical SAM superfamily NZD89_18960 PF01029 NusB family NZD89_18960 PF01189 16S rRNA methyltransferase RsmB/F NZD89_18965 PF00551 Formyl transferase NZD89_18965 PF02911 Formyl transferase, C-terminal domain NZD89_18970 PF01327 Polypeptide deformylase NZD89_18975 PF00271 Helicase conserved C-terminal domain NZD89_18975 PF17764 3′ DNA-binding domain (3′BD) NZD89_18975 PF18074 Primosomal protein N C-terminal domain NZD89_18975 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NZD89_18975 PF04851 Type III restriction enzyme, res subunit NZD89_18980 PF04127 DNA / pantothenate metabolism flavoprotein NZD89_18980 PF02441 Flavoprotein NZD89_18985 PF01192 RNA polymerase Rpb6 NZD89_18990 PF08340 Domain of unknown function (DUF1732) NZD89_18990 PF03755 YicC-like family, N-terminal region NZD89_18995 PF00689 Cation transporting ATPase, C-terminus NZD89_18995 PF00690 Cation transporter/ATPase, N-terminus NZD89_19000 PF05670 NFACT protein RNA binding domain NZD89_19010 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NZD89_19010 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NZD89_19015 PF00156 Phosphoribosyl transferase domain NZD89_19020 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NZD89_19025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NZD89_19025 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NZD89_19025 PF02142 MGS-like domain NZD89_19030 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NZD89_19030 PF00117 Glutamine amidotransferase class-I NZD89_19035 PF01979 Amidohydrolase family NZD89_19040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NZD89_19040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NZD89_19045 PF00156 Phosphoribosyl transferase domain NZD89_19050 PF00849 RNA pseudouridylate synthase NZD89_19050 PF01479 S4 domain NZD89_19055 PF01252 Signal peptidase (SPase) II NZD89_19060 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) NZD89_19075 PF05103 DivIVA protein NZD89_19080 PF01479 S4 domain NZD89_19080 PF17774 Putative RNA-binding domain in YlmH NZD89_19090 PF01168 Alanine racemase, N-terminal domain NZD89_19095 PF02578 Multi-copper polyphenol oxidoreductase laccase NZD89_19100 PF05239 PRC-barrel domain NZD89_19105 PF04545 Sigma-70, region 4 NZD89_19105 PF04542 Sigma-70 region 2 NZD89_19105 PF04539 Sigma-70 region 3 NZD89_19110 PF04545 Sigma-70, region 4 NZD89_19110 PF04542 Sigma-70 region 2 NZD89_19115 PF03419 Sporulation factor SpoIIGA NZD89_19120 PF00091 Tubulin/FtsZ family, GTPase domain NZD89_19120 PF12327 FtsZ family, C-terminal domain NZD89_19125 PF02491 SHS2 domain inserted in FTSA NZD89_19130 PF06947 Protein of unknown function (DUF1290) NZD89_19135 PF05949 Bacterial protein of unknown function (DUF881) NZD89_19140 PF05949 Bacterial protein of unknown function (DUF881) NZD89_19145 PF08478 POTRA domain, FtsQ-type NZD89_19150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NZD89_19155 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NZD89_19155 PF01565 FAD binding domain NZD89_19160 PF04101 Glycosyltransferase family 28 C-terminal domain NZD89_19160 PF03033 Glycosyltransferase family 28 N-terminal domain NZD89_19165 PF01098 Cell cycle protein NZD89_19170 PF02875 Mur ligase family, glutamate ligase domain NZD89_19170 PF08245 Mur ligase middle domain NZD89_19175 PF00953 Glycosyl transferase family 4 NZD89_19180 PF01225 Mur ligase family, catalytic domain NZD89_19180 PF02875 Mur ligase family, glutamate ligase domain NZD89_19180 PF08245 Mur ligase middle domain NZD89_19185 PF00905 Penicillin binding protein transpeptidase domain NZD89_19185 PF03793 PASTA domain NZD89_19185 PF03717 Penicillin-binding Protein dimerisation domain NZD89_19190 PF03793 PASTA domain NZD89_19190 PF03717 Penicillin-binding Protein dimerisation domain NZD89_19190 PF00905 Penicillin binding protein transpeptidase domain NZD89_19200 PF01795 MraW methylase family NZD89_19205 PF02381 MraZ protein, putative antitoxin-like NZD89_19210 PF10079 Bacillithiol biosynthesis BshC NZD89_19215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NZD89_19230 PF05504 Spore germination B3/ GerAC like, C-terminal NZD89_19245 PF02568 Thiamine biosynthesis protein (ThiI) NZD89_19245 PF02926 THUMP domain NZD89_19250 PF00266 Aminotransferase class-V NZD89_19255 PF00574 Clp protease NZD89_19285 PF06949 Protein of unknown function (DUF1292) NZD89_19290 PF13193 AMP-binding enzyme C-terminal domain NZD89_19290 PF00501 AMP-binding enzyme NZD89_19290 PF16177 Acetyl-coenzyme A synthetase N-terminus NZD89_19310 PF00266 Aminotransferase class-V NZD89_19315 PF01842 ACT domain NZD89_19315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NZD89_19315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NZD89_19320 PF13840 ACT domain NZD89_19320 PF01842 ACT domain NZD89_19320 PF00696 Amino acid kinase family NZD89_19325 PF14698 Argininosuccinate lyase C-terminal NZD89_19325 PF00206 Lyase NZD89_19330 PF00764 Arginosuccinate synthase NZD89_19335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NZD89_19335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NZD89_19340 PF01493 GXGXG motif NZD89_19340 PF01645 Conserved region in glutamate synthase NZD89_19340 PF04898 Glutamate synthase central domain NZD89_19340 PF00310 Glutamine amidotransferases class-II NZD89_19345 PF00583 Acetyltransferase (GNAT) family NZD89_19350 PF00202 Aminotransferase class-III NZD89_19355 PF00696 Amino acid kinase family NZD89_19360 PF01118 Semialdehyde dehydrogenase, NAD binding domain NZD89_19360 PF02774 Semialdehyde dehydrogenase, dimerisation domain NZD89_19370 PF13380 CoA binding domain NZD89_19385 PF05504 Spore germination B3/ GerAC like, C-terminal NZD89_19425 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_19435 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_19455 PF02311 AraC-like ligand binding domain NZD89_19455 PF12833 Helix-turn-helix domain NZD89_19460 PF05721 Phytanoyl-CoA dioxygenase (PhyH) NZD89_19465 PF13520 Amino acid permease NZD89_19470 PF00701 Dihydrodipicolinate synthetase family NZD89_19475 PF00171 Aldehyde dehydrogenase family NZD89_19480 PF00392 Bacterial regulatory proteins, gntR family NZD89_19480 PF07729 FCD domain NZD89_19485 PF05544 Proline racemase NZD89_19490 PF05544 Proline racemase NZD89_19495 PF01266 FAD dependent oxidoreductase NZD89_19510 PF04324 BFD-like [2Fe-2S] binding domain NZD89_19510 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_19515 PF01321 Creatinase/Prolidase N-terminal domain NZD89_19515 PF00557 Metallopeptidase family M24 NZD89_19520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_19525 PF05195 Aminopeptidase P, N-terminal domain NZD89_19525 PF00557 Metallopeptidase family M24 NZD89_19535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_19540 PF00005 ABC transporter NZD89_19540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_19545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_19545 PF00005 ABC transporter NZD89_19555 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_19565 PF07944 Beta-L-arabinofuranosidase, GH127 NZD89_19570 PF14659 Phage integrase, N-terminal SAM-like domain NZD89_19570 PF00589 Phage integrase family NZD89_19580 PF04715 Anthranilate synthase component I, N terminal region NZD89_19580 PF00425 chorismate binding enzyme NZD89_19585 PF00117 Glutamine amidotransferase class-I NZD89_19670 PF05979 Bacterial protein of unknown function (DUF896) NZD89_19680 PF01479 S4 domain NZD89_19680 PF00579 tRNA synthetases class I (W and Y) NZD89_19685 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NZD89_19685 PF18277 AbrB C-terminal domain NZD89_19690 PF01042 Endoribonuclease L-PSP NZD89_19700 PF00149 Calcineurin-like phosphoesterase NZD89_19705 PF00324 Amino acid permease NZD89_19710 PF00202 Aminotransferase class-III NZD89_19715 PF02954 Bacterial regulatory protein, Fis family NZD89_19715 PF00158 Sigma-54 interaction domain NZD89_19715 PF01590 GAF domain NZD89_19725 PF04199 Putative cyclase NZD89_19730 PF00989 PAS fold NZD89_19730 PF00158 Sigma-54 interaction domain NZD89_19730 PF02954 Bacterial regulatory protein, Fis family NZD89_19740 PF02608 ABC transporter substrate-binding protein PnrA-like NZD89_19750 PF01557 Fumarylacetoacetate (FAA) hydrolase family NZD89_19760 PF00107 Zinc-binding dehydrogenase NZD89_19760 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_19770 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NZD89_19770 PF08666 SAF domain NZD89_19780 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NZD89_19780 PF08666 SAF domain NZD89_19785 PF02954 Bacterial regulatory protein, Fis family NZD89_19785 PF00158 Sigma-54 interaction domain NZD89_19785 PF13426 PAS domain NZD89_19800 PF02441 Flavoprotein NZD89_19805 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NZD89_19810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_19810 PF03466 LysR substrate binding domain NZD89_19815 PF00293 NUDIX domain NZD89_19830 PF00881 Nitroreductase family NZD89_19835 PF03070 TENA/THI-4/PQQC family NZD89_19845 PF07690 Major Facilitator Superfamily NZD89_19855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NZD89_19880 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_19885 PF00005 ABC transporter NZD89_19885 PF12857 TOBE-like domain NZD89_19890 PF01914 MarC family integral membrane protein NZD89_19895 PF00190 Cupin NZD89_19900 PF01047 MarR family NZD89_19910 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NZD89_19915 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NZD89_19925 PF01144 Coenzyme A transferase NZD89_19930 PF00753 Metallo-beta-lactamase superfamily NZD89_19940 PF01144 Coenzyme A transferase NZD89_19945 PF00108 Thiolase, N-terminal domain NZD89_19945 PF02803 Thiolase, C-terminal domain NZD89_19950 PF00356 Bacterial regulatory proteins, lacI family NZD89_19955 PF07690 Major Facilitator Superfamily NZD89_19965 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_19965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NZD89_19980 PF08220 DeoR-like helix-turn-helix domain NZD89_19980 PF00455 DeoR C terminal sensor domain NZD89_19985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_19985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_19990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_19990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_19995 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_20000 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_20025 PF02322 Cytochrome bd terminal oxidase subunit II NZD89_20030 PF01654 Cytochrome bd terminal oxidase subunit I NZD89_20045 PF07690 Major Facilitator Superfamily NZD89_20050 PF00857 Isochorismatase family NZD89_20055 PF00440 Bacterial regulatory proteins, tetR family NZD89_20065 PF00171 Aldehyde dehydrogenase family NZD89_20070 PF00491 Arginase family NZD89_20080 PF00924 Mechanosensitive ion channel NZD89_20090 PF00296 Luciferase-like monooxygenase NZD89_20105 PF03611 PTS system sugar-specific permease component NZD89_20110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NZD89_20115 PF08279 HTH domain NZD89_20115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NZD89_20115 PF00874 PRD domain NZD89_20115 PF05043 Mga helix-turn-helix domain NZD89_20135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NZD89_20135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NZD89_20135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NZD89_20135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NZD89_20160 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NZD89_20165 PF00480 ROK family NZD89_20175 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_20185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_20185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_20205 PF01068 ATP dependent DNA ligase domain NZD89_20205 PF04679 ATP dependent DNA ligase C terminal region NZD89_20255 PF13426 PAS domain NZD89_20255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_20255 PF00512 His Kinase A (phospho-acceptor) domain NZD89_20255 PF13188 PAS domain NZD89_20255 PF00989 PAS fold NZD89_20270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NZD89_20270 PF00384 Molybdopterin oxidoreductase NZD89_20270 PF01568 Molydopterin dinucleotide binding domain NZD89_20275 PF01476 LysM domain NZD89_20275 PF01464 Transglycosylase SLT domain NZD89_20280 PF13396 Phospholipase_D-nuclease N-terminal NZD89_20280 PF13091 PLD-like domain NZD89_20285 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NZD89_20385 PF00067 Cytochrome P450 NZD89_20410 PF01965 DJ-1/PfpI family NZD89_20440 PF04237 YjbR NZD89_20445 PF02371 Transposase IS116/IS110/IS902 family NZD89_20445 PF01548 Transposase NZD89_20465 PF01022 Bacterial regulatory protein, arsR family NZD89_20480 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NZD89_20485 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NZD89_20490 PF07690 Major Facilitator Superfamily NZD89_20505 PF01695 IstB-like ATP binding protein NZD89_20515 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NZD89_20520 PF01548 Transposase NZD89_20520 PF02371 Transposase IS116/IS110/IS902 family NZD89_20525 PF07385 D-lyxose isomerase NZD89_20530 PF13407 Periplasmic binding protein domain NZD89_20535 PF02653 Branched-chain amino acid transport system / permease component NZD89_20540 PF00005 ABC transporter NZD89_20545 PF01116 Fructose-bisphosphate aldolase class-II NZD89_20550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NZD89_20550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NZD89_20555 PF00294 pfkB family carbohydrate kinase NZD89_20560 PF01548 Transposase NZD89_20560 PF02371 Transposase IS116/IS110/IS902 family NZD89_20565 PF00356 Bacterial regulatory proteins, lacI family NZD89_20580 PF00899 ThiF family NZD89_20585 PF06463 Molybdenum Cofactor Synthesis C NZD89_20585 PF04055 Radical SAM superfamily NZD89_20590 PF00994 Probable molybdopterin binding domain NZD89_20590 PF03454 MoeA C-terminal region (domain IV) NZD89_20590 PF03453 MoeA N-terminal region (domain I and II) NZD89_20595 PF02391 MoaE protein NZD89_20605 PF01967 MoaC family NZD89_20610 PF01654 Cytochrome bd terminal oxidase subunit I NZD89_20620 PF00005 ABC transporter NZD89_20620 PF00664 ABC transporter transmembrane region NZD89_20625 PF00664 ABC transporter transmembrane region NZD89_20625 PF00005 ABC transporter NZD89_20630 PF02322 Cytochrome bd terminal oxidase subunit II NZD89_20635 PF01654 Cytochrome bd terminal oxidase subunit I NZD89_20665 PF12804 MobA-like NTP transferase domain NZD89_20675 PF02634 FdhD/NarQ family NZD89_20680 PF07849 Protein of unknown function (DUF1641) NZD89_20685 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NZD89_20685 PF00384 Molybdopterin oxidoreductase NZD89_20685 PF00037 4Fe-4S binding domain NZD89_20685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NZD89_20685 PF01568 Molydopterin dinucleotide binding domain NZD89_20690 PF01548 Transposase NZD89_20690 PF02371 Transposase IS116/IS110/IS902 family NZD89_20695 PF02371 Transposase IS116/IS110/IS902 family NZD89_20695 PF01548 Transposase NZD89_20700 PF02371 Transposase IS116/IS110/IS902 family NZD89_20700 PF01548 Transposase NZD89_20720 PF03458 UPF0126 domain NZD89_20725 PF01967 MoaC family NZD89_20740 PF00753 Metallo-beta-lactamase superfamily NZD89_20845 PF02371 Transposase IS116/IS110/IS902 family NZD89_20845 PF01548 Transposase NZD89_20855 PF00294 pfkB family carbohydrate kinase NZD89_20860 PF01116 Fructose-bisphosphate aldolase class-II NZD89_20870 PF00455 DeoR C terminal sensor domain NZD89_20870 PF08220 DeoR-like helix-turn-helix domain NZD89_20875 PF00480 ROK family NZD89_20880 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NZD89_20890 PF00294 pfkB family carbohydrate kinase NZD89_20895 PF13520 Amino acid permease NZD89_20910 PF02371 Transposase IS116/IS110/IS902 family NZD89_20910 PF01548 Transposase NZD89_20915 PF13298 DNA polymerase Ligase (LigD) NZD89_20915 PF04679 ATP dependent DNA ligase C terminal region NZD89_20915 PF01068 ATP dependent DNA ligase domain NZD89_20925 PF04294 VanW like protein NZD89_20935 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_20935 PF00107 Zinc-binding dehydrogenase NZD89_20975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_20990 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_20995 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_20995 PF12911 N-terminal TM domain of oligopeptide transport permease C NZD89_21000 PF00005 ABC transporter NZD89_21000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_21005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_21005 PF00005 ABC transporter NZD89_21020 PF00293 NUDIX domain NZD89_21025 PF02681 Divergent PAP2 family NZD89_21030 PF05343 M42 glutamyl aminopeptidase NZD89_21035 PF08827 Domain of unknown function (DUF1805) NZD89_21045 PF09335 SNARE associated Golgi protein NZD89_21050 PF01966 HD domain NZD89_21055 PF01521 Iron-sulphur cluster biosynthesis NZD89_21060 PF00578 AhpC/TSA family NZD89_21065 PF01276 Orn/Lys/Arg decarboxylase, major domain NZD89_21065 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NZD89_21070 PF08741 YwhD family NZD89_21085 PF00155 Aminotransferase class I and II NZD89_21090 PF01098 Cell cycle protein NZD89_21095 PF03009 Glycerophosphoryl diester phosphodiesterase family NZD89_21105 PF01098 Cell cycle protein NZD89_21125 PF13185 GAF domain NZD89_21135 PF08245 Mur ligase middle domain NZD89_21135 PF08353 Domain of unknown function (DUF1727) NZD89_21140 PF07685 CobB/CobQ-like glutamine amidotransferase domain NZD89_21145 PF08327 Activator of Hsp90 ATPase homolog 1-like protein NZD89_21150 PF01022 Bacterial regulatory protein, arsR family NZD89_21165 PF03061 Thioesterase superfamily NZD89_21175 PF08544 GHMP kinases C terminal NZD89_21175 PF00288 GHMP kinases N terminal domain NZD89_21180 PF00291 Pyridoxal-phosphate dependent enzyme NZD89_21185 PF12706 Beta-lactamase superfamily domain NZD89_21190 PF00675 Insulinase (Peptidase family M16) NZD89_21190 PF05193 Peptidase M16 inactive domain NZD89_21195 PF05193 Peptidase M16 inactive domain NZD89_21205 PF00037 4Fe-4S binding domain NZD89_21210 PF07690 Major Facilitator Superfamily NZD89_21215 PF03717 Penicillin-binding Protein dimerisation domain NZD89_21215 PF00905 Penicillin binding protein transpeptidase domain NZD89_21220 PF01261 Xylose isomerase-like TIM barrel NZD89_21225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NZD89_21225 PF02770 Acyl-CoA dehydrogenase, middle domain NZD89_21225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NZD89_21230 PF02803 Thiolase, C-terminal domain NZD89_21230 PF00108 Thiolase, N-terminal domain NZD89_21235 PF00378 Enoyl-CoA hydratase/isomerase NZD89_21235 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NZD89_21235 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NZD89_21240 PF00890 FAD binding domain NZD89_21240 PF02910 Fumarate reductase flavoprotein C-term NZD89_21245 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NZD89_21245 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NZD89_21250 PF02445 Quinolinate synthetase A protein NZD89_21260 PF01063 Amino-transferase class IV NZD89_21265 PF01230 HIT domain NZD89_21290 PF13091 PLD-like domain NZD89_21295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NZD89_21295 PF02811 PHP domain NZD89_21295 PF14579 Helix-hairpin-helix motif NZD89_21295 PF07733 Bacterial DNA polymerase III alpha NTPase domain NZD89_21305 PF00817 impB/mucB/samB family NZD89_21305 PF11799 impB/mucB/samB family C-terminal domain NZD89_21320 PF00271 Helicase conserved C-terminal domain NZD89_21320 PF12419 SNF2 Helicase protein NZD89_21320 PF00176 SNF2 family N-terminal domain NZD89_21330 PF14034 Sporulation protein YtrH NZD89_21345 PF00557 Metallopeptidase family M24 NZD89_21345 PF01321 Creatinase/Prolidase N-terminal domain NZD89_21350 PF14398 YheC/D like ATP-grasp NZD89_21355 PF00534 Glycosyl transferases group 1 NZD89_21355 PF13439 Glycosyltransferase Family 4 NZD89_21360 PF13520 Amino acid permease NZD89_21365 PF01619 Proline dehydrogenase NZD89_21370 PF02401 LytB protein NZD89_21375 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NZD89_21375 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain NZD89_21375 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NZD89_21380 PF00459 Inositol monophosphatase family NZD89_21385 PF00326 Prolyl oligopeptidase family NZD89_21385 PF07676 WD40-like Beta Propeller Repeat NZD89_21390 PF10415 Fumarase C C-terminus NZD89_21390 PF00206 Lyase NZD89_21405 PF01012 Electron transfer flavoprotein domain NZD89_21405 PF00766 Electron transfer flavoprotein FAD-binding domain NZD89_21410 PF01012 Electron transfer flavoprotein domain NZD89_21415 PF00440 Bacterial regulatory proteins, tetR family NZD89_21415 PF08359 YsiA-like protein, C-terminal region NZD89_21425 PF00578 AhpC/TSA family NZD89_21425 PF10417 C-terminal domain of 1-Cys peroxiredoxin NZD89_21440 PF00005 ABC transporter NZD89_21445 PF00392 Bacterial regulatory proteins, gntR family NZD89_21450 PF07690 Major Facilitator Superfamily NZD89_21455 PF04519 Polymer-forming cytoskeletal NZD89_21455 PF04519 Polymer-forming cytoskeletal NZD89_21465 PF13171 Protein of unknown function (DUF4004) NZD89_21470 PF02082 Transcriptional regulator NZD89_21475 PF00355 Rieske [2Fe-2S] domain NZD89_21480 PF01458 Uncharacterized protein family (UPF0051) NZD89_21485 PF01592 NifU-like N terminal domain NZD89_21490 PF00266 Aminotransferase class-V NZD89_21495 PF01458 Uncharacterized protein family (UPF0051) NZD89_21500 PF00005 ABC transporter NZD89_21505 PF01883 Iron-sulfur cluster assembly protein NZD89_21510 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NZD89_21510 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NZD89_21525 PF04542 Sigma-70 region 2 NZD89_21525 PF08281 Sigma-70, region 4 NZD89_21530 PF01180 Dihydroorotate dehydrogenase NZD89_21540 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NZD89_21540 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NZD89_21545 PF01227 GTP cyclohydrolase I NZD89_21565 PF04545 Sigma-70, region 4 NZD89_21565 PF04542 Sigma-70 region 2 NZD89_21575 PF09335 SNARE associated Golgi protein NZD89_21585 PF07690 Major Facilitator Superfamily NZD89_21605 PF04545 Sigma-70, region 4 NZD89_21605 PF04542 Sigma-70 region 2 NZD89_21625 PF00595 PDZ domain NZD89_21625 PF13180 PDZ domain NZD89_21630 PF00326 Prolyl oligopeptidase family NZD89_21630 PF07676 WD40-like Beta Propeller Repeat NZD89_21635 PF00350 Dynamin family NZD89_21640 PF00350 Dynamin family NZD89_21645 PF05343 M42 glutamyl aminopeptidase NZD89_21655 PF10776 Protein of unknown function (DUF2600) NZD89_21660 PF02152 Dihydroneopterin aldolase NZD89_21665 PF03631 Virulence factor BrkB NZD89_21670 PF01479 S4 domain NZD89_21670 PF00849 RNA pseudouridylate synthase NZD89_21690 PF13361 UvrD-like helicase C-terminal domain NZD89_21690 PF00580 UvrD/REP helicase N-terminal domain NZD89_21695 PF00501 AMP-binding enzyme NZD89_21710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NZD89_21720 PF00483 Nucleotidyl transferase NZD89_21735 PF04143 Sulphur transport NZD89_21740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NZD89_21740 PF02770 Acyl-CoA dehydrogenase, middle domain NZD89_21740 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NZD89_21745 PF02585 GlcNAc-PI de-N-acetylase NZD89_21760 PF00581 Rhodanese-like domain NZD89_21765 PF00106 short chain dehydrogenase NZD89_21775 PF13419 Haloacid dehalogenase-like hydrolase NZD89_21795 PF00892 EamA-like transporter family NZD89_21800 PF03466 LysR substrate binding domain NZD89_21800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_21820 PF00456 Transketolase, thiamine diphosphate binding domain NZD89_21820 PF02780 Transketolase, C-terminal domain NZD89_21820 PF02779 Transketolase, pyrimidine binding domain NZD89_21830 PF00005 ABC transporter NZD89_21835 PF09819 ABC-type cobalt transport system, permease component NZD89_21840 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NZD89_21845 PF00892 EamA-like transporter family NZD89_21850 PF00248 Aldo/keto reductase family NZD89_21855 PF01502 Phosphoribosyl-AMP cyclohydrolase NZD89_21855 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NZD89_21860 PF00977 Histidine biosynthesis protein NZD89_21865 PF00977 Histidine biosynthesis protein NZD89_21870 PF00117 Glutamine amidotransferase class-I NZD89_21875 PF00475 Imidazoleglycerol-phosphate dehydratase NZD89_21880 PF00815 Histidinol dehydrogenase NZD89_21885 PF01634 ATP phosphoribosyltransferase NZD89_21890 PF13393 Histidyl-tRNA synthetase NZD89_21895 PF04551 GcpE protein NZD89_21905 PF00202 Aminotransferase class-III NZD89_21910 PF01040 UbiA prenyltransferase family NZD89_21915 PF00953 Glycosyl transferase family 4 NZD89_21920 PF02926 THUMP domain NZD89_21920 PF01170 Putative RNA methylase family UPF0020 NZD89_21925 PF00330 Aconitase family (aconitate hydratase) NZD89_21925 PF00694 Aconitase C-terminal domain NZD89_21930 PF00465 Iron-containing alcohol dehydrogenase NZD89_21955 PF02545 Maf-like protein NZD89_21960 PF01053 Cys/Met metabolism PLP-dependent enzyme NZD89_21970 PF04241 Protein of unknown function (DUF423) NZD89_21975 PF01425 Amidase NZD89_21985 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_21990 PF00583 Acetyltransferase (GNAT) family NZD89_21990 PF13380 CoA binding domain NZD89_21990 PF13607 Succinyl-CoA ligase like flavodoxin domain NZD89_21995 PF00085 Thioredoxin NZD89_22015 PF13426 PAS domain NZD89_22015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_22015 PF00512 His Kinase A (phospho-acceptor) domain NZD89_22015 PF13188 PAS domain NZD89_22015 PF00989 PAS fold NZD89_22025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NZD89_22025 PF02378 Phosphotransferase system, EIIC NZD89_22030 PF00294 pfkB family carbohydrate kinase NZD89_22035 PF00455 DeoR C terminal sensor domain NZD89_22035 PF08220 DeoR-like helix-turn-helix domain NZD89_22040 PF00381 PTS HPr component phosphorylation site NZD89_22045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NZD89_22045 PF02378 Phosphotransferase system, EIIC NZD89_22045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NZD89_22050 PF02896 PEP-utilising enzyme, TIM barrel domain NZD89_22050 PF00391 PEP-utilising enzyme, mobile domain NZD89_22050 PF05524 PEP-utilising enzyme, N-terminal NZD89_22065 PF16363 GDP-mannose 4,6 dehydratase NZD89_22070 PF10509 Galactokinase galactose-binding signature NZD89_22070 PF00288 GHMP kinases N terminal domain NZD89_22070 PF08544 GHMP kinases C terminal NZD89_22075 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NZD89_22075 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NZD89_22080 PF08220 DeoR-like helix-turn-helix domain NZD89_22080 PF00455 DeoR C terminal sensor domain NZD89_22090 PF01451 Low molecular weight phosphotyrosine protein phosphatase NZD89_22095 PF02585 GlcNAc-PI de-N-acetylase NZD89_22100 PF08830 Protein of unknown function (DUF1806) NZD89_22105 PF00171 Aldehyde dehydrogenase family NZD89_22115 PF13673 Acetyltransferase (GNAT) domain NZD89_22120 PF17763 Glutaminase/Asparaginase C-terminal domain NZD89_22120 PF00710 Asparaginase, N-terminal NZD89_22125 PF07690 Major Facilitator Superfamily NZD89_22130 PF03851 UV-endonuclease UvdE NZD89_22135 PF00356 Bacterial regulatory proteins, lacI family NZD89_22145 PF13538 UvrD-like helicase C-terminal domain NZD89_22150 PF01544 CorA-like Mg2+ transporter protein NZD89_22160 PF00501 AMP-binding enzyme NZD89_22160 PF13193 AMP-binding enzyme C-terminal domain NZD89_22165 PF01066 CDP-alcohol phosphatidyltransferase NZD89_22175 PF00857 Isochorismatase family NZD89_22180 PF02390 Putative methyltransferase NZD89_22185 PF00171 Aldehyde dehydrogenase family NZD89_22190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_22190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_22200 PF00749 tRNA synthetases class I (E and Q), catalytic domain NZD89_22205 PF00248 Aldo/keto reductase family NZD89_22230 PF04134 Protein of unknown function, DUF393 NZD89_22235 PF09844 Uncharacterized conserved protein (COG2071) NZD89_22255 PF00583 Acetyltransferase (GNAT) family NZD89_22255 PF00795 Carbon-nitrogen hydrolase NZD89_22270 PF16921 Tex protein YqgF-like domain NZD89_22270 PF09371 Tex-like protein N-terminal domain NZD89_22270 PF17674 HHH domain NZD89_22270 PF00575 S1 RNA binding domain NZD89_22275 PF03807 NADP oxidoreductase coenzyme F420-dependent NZD89_22275 PF14748 Pyrroline-5-carboxylate reductase dimerisation NZD89_22280 PF00459 Inositol monophosphatase family NZD89_22285 PF01747 ATP-sulfurylase NZD89_22285 PF14306 PUA-like domain NZD89_22305 PF06628 Catalase-related immune-responsive NZD89_22305 PF00199 Catalase NZD89_22315 PF01638 HxlR-like helix-turn-helix NZD89_22320 PF04264 YceI-like domain NZD89_22325 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NZD89_22330 PF00005 ABC transporter NZD89_22335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NZD89_22340 PF00270 DEAD/DEAH box helicase NZD89_22340 PF00271 Helicase conserved C-terminal domain NZD89_22345 PF13520 Amino acid permease NZD89_22355 PF00005 ABC transporter NZD89_22355 PF16326 ABC transporter C-terminal domain NZD89_22355 PF12848 ABC transporter NZD89_22360 PF00860 Permease family NZD89_22375 PF01625 Peptide methionine sulfoxide reductase NZD89_22380 PF00085 Thioredoxin NZD89_22385 PF00117 Glutamine amidotransferase class-I NZD89_22385 PF00958 GMP synthase C terminal domain NZD89_22385 PF13302 Acetyltransferase (GNAT) domain NZD89_22385 PF13673 Acetyltransferase (GNAT) domain NZD89_22385 PF03352 Methyladenine glycosylase NZD89_22400 PF00920 Dehydratase family NZD89_22405 PF07729 FCD domain NZD89_22405 PF00392 Bacterial regulatory proteins, gntR family NZD89_22415 PF02913 FAD linked oxidases, C-terminal domain NZD89_22415 PF01565 FAD binding domain NZD89_22420 PF00378 Enoyl-CoA hydratase/isomerase NZD89_22425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NZD89_22425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NZD89_22430 PF13193 AMP-binding enzyme C-terminal domain NZD89_22430 PF00501 AMP-binding enzyme NZD89_22440 PF00155 Aminotransferase class I and II NZD89_22445 PF00501 AMP-binding enzyme NZD89_22475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_22475 PF00989 PAS fold NZD89_22475 PF00512 His Kinase A (phospho-acceptor) domain NZD89_22475 PF08447 PAS fold NZD89_22480 PF08502 LeuA allosteric (dimerisation) domain NZD89_22480 PF00682 HMGL-like NZD89_22485 PF00248 Aldo/keto reductase family NZD89_22495 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_22500 PF02585 GlcNAc-PI de-N-acetylase NZD89_22515 PF01070 FMN-dependent dehydrogenase NZD89_22520 PF00082 Subtilase family NZD89_22520 PF09286 Pro-kumamolisin, activation domain NZD89_22525 PF01047 MarR family NZD89_22530 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_22540 PF07690 Major Facilitator Superfamily NZD89_22560 PF01869 BadF/BadG/BcrA/BcrD ATPase family NZD89_22565 PF00534 Glycosyl transferases group 1 NZD89_22565 PF13439 Glycosyltransferase Family 4 NZD89_22605 PF02899 Phage integrase, N-terminal SAM-like domain NZD89_22605 PF00589 Phage integrase family NZD89_22620 PF02371 Transposase IS116/IS110/IS902 family NZD89_22620 PF01548 Transposase NZD89_22655 PF01022 Bacterial regulatory protein, arsR family NZD89_22660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NZD89_22665 PF02040 Arsenical pump membrane protein NZD89_22670 PF01451 Low molecular weight phosphotyrosine protein phosphatase NZD89_22675 PF05506 Domain of unknown function (DUF756) NZD89_22675 PF04185 Phosphoesterase family NZD89_22720 PF01609 Transposase DDE domain NZD89_22725 PF00557 Metallopeptidase family M24 NZD89_22730 PF01327 Polypeptide deformylase NZD89_22740 PF01979 Amidohydrolase family NZD89_22755 PF00487 Fatty acid desaturase NZD89_22760 PF13091 PLD-like domain NZD89_22760 PF13396 Phospholipase_D-nuclease N-terminal NZD89_22775 PF01609 Transposase DDE domain NZD89_22790 PF01548 Transposase NZD89_22790 PF02371 Transposase IS116/IS110/IS902 family NZD89_22825 PF01695 IstB-like ATP binding protein NZD89_22840 PF00704 Glycosyl hydrolases family 18 NZD89_22840 PF01476 LysM domain NZD89_22845 PF12704 MacB-like periplasmic core domain NZD89_22845 PF00005 ABC transporter NZD89_22845 PF02687 FtsX-like permease family NZD89_22850 PF00005 ABC transporter NZD89_22860 PF04185 Phosphoesterase family NZD89_22885 PF02678 Pirin NZD89_22885 PF17954 Quercetinase C-terminal cupin domain NZD89_22900 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NZD89_22900 PF01568 Molydopterin dinucleotide binding domain NZD89_22900 PF00384 Molybdopterin oxidoreductase NZD89_22900 PF12838 4Fe-4S dicluster domain NZD89_22900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NZD89_22925 PF00248 Aldo/keto reductase family NZD89_22930 PF08241 Methyltransferase domain NZD89_22940 PF01081 KDPG and KHG aldolase NZD89_22945 PF04608 Phosphatidylglycerophosphatase A NZD89_22975 PF17871 AAA lid domain NZD89_22975 PF07724 AAA domain (Cdc48 subfamily) NZD89_22975 PF10431 C-terminal, D2-small domain, of ClpB protein NZD89_22975 PF00004 ATPase family associated with various cellular activities (AAA) NZD89_22985 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_22990 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_23000 PF00248 Aldo/keto reductase family NZD89_23005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_23005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_23015 PF16193 AAA C-terminal domain NZD89_23015 PF05496 Holliday junction DNA helicase RuvB P-loop domain NZD89_23015 PF12002 MgsA AAA+ ATPase C terminal NZD89_23020 PF12706 Beta-lactamase superfamily domain NZD89_23025 PF01966 HD domain NZD89_23025 PF01743 Poly A polymerase head domain NZD89_23025 PF12627 Probable RNA and SrmB- binding site of polymerase A NZD89_23035 PF01910 Thiamine-binding protein NZD89_23040 PF01923 Cobalamin adenosyltransferase NZD89_23045 PF07685 CobB/CobQ-like glutamine amidotransferase domain NZD89_23050 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NZD89_23050 PF07685 CobB/CobQ-like glutamine amidotransferase domain NZD89_23055 PF13305 Tetracyclin repressor-like, C-terminal domain NZD89_23055 PF00440 Bacterial regulatory proteins, tetR family NZD89_23085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NZD89_23085 PF00384 Molybdopterin oxidoreductase NZD89_23085 PF12838 4Fe-4S dicluster domain NZD89_23085 PF01568 Molydopterin dinucleotide binding domain NZD89_23085 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NZD89_23090 PF01226 Formate/nitrite transporter NZD89_23095 PF10057 Uncharacterized conserved protein (DUF2294) NZD89_23105 PF01380 SIS domain NZD89_23115 PF07690 Major Facilitator Superfamily NZD89_23130 PF00356 Bacterial regulatory proteins, lacI family NZD89_23145 PF01047 MarR family NZD89_23160 PF00535 Glycosyl transferase family 2 NZD89_23170 PF13188 PAS domain NZD89_23170 PF00989 PAS fold NZD89_23170 PF00512 His Kinase A (phospho-acceptor) domain NZD89_23170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_23170 PF13426 PAS domain NZD89_23180 PF06968 Biotin and Thiamin Synthesis associated domain NZD89_23180 PF04055 Radical SAM superfamily NZD89_23195 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NZD89_23200 PF00455 DeoR C terminal sensor domain NZD89_23200 PF08220 DeoR-like helix-turn-helix domain NZD89_23205 PF01979 Amidohydrolase family NZD89_23210 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NZD89_23215 PF00381 PTS HPr component phosphorylation site NZD89_23220 PF02378 Phosphotransferase system, EIIC NZD89_23220 PF00367 phosphotransferase system, EIIB NZD89_23225 PF02378 Phosphotransferase system, EIIC NZD89_23225 PF00367 phosphotransferase system, EIIB NZD89_23230 PF03123 CAT RNA binding domain NZD89_23230 PF00874 PRD domain NZD89_23240 PF04172 LrgB-like family NZD89_23245 PF03788 LrgA family NZD89_23250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_23250 PF03466 LysR substrate binding domain NZD89_23255 PF00268 Ribonucleotide reductase, small chain NZD89_23260 PF03477 ATP cone domain NZD89_23260 PF02867 Ribonucleotide reductase, barrel domain NZD89_23260 PF00317 Ribonucleotide reductase, all-alpha domain NZD89_23265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_23270 PF01546 Peptidase family M20/M25/M40 NZD89_23275 PF03466 LysR substrate binding domain NZD89_23275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_23280 PF03458 UPF0126 domain NZD89_23300 PF16658 Class II release factor RF3, C-terminal domain NZD89_23300 PF03144 Elongation factor Tu domain 2 NZD89_23300 PF00009 Elongation factor Tu GTP binding domain NZD89_23305 PF04552 Sigma-54, DNA binding domain NZD89_23305 PF04963 Sigma-54 factor, core binding domain NZD89_23305 PF00309 Sigma-54 factor, Activator interacting domain (AID) NZD89_23310 PF00171 Aldehyde dehydrogenase family NZD89_23315 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_23315 PF00107 Zinc-binding dehydrogenase NZD89_23325 PF02954 Bacterial regulatory protein, Fis family NZD89_23325 PF00158 Sigma-54 interaction domain NZD89_23325 PF00989 PAS fold NZD89_23330 PF01475 Ferric uptake regulator family NZD89_23335 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NZD89_23335 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NZD89_23345 PF01081 KDPG and KHG aldolase NZD89_23360 PF13378 Enolase C-terminal domain-like NZD89_23360 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NZD89_23365 PF00294 pfkB family carbohydrate kinase NZD89_23380 PF01614 Bacterial transcriptional regulator NZD89_23380 PF09339 IclR helix-turn-helix domain NZD89_23385 PF07883 Cupin domain NZD89_23390 PF01557 Fumarylacetoacetate (FAA) hydrolase family NZD89_23395 PF01131 DNA topoisomerase NZD89_23395 PF01751 Toprim domain NZD89_23400 PF00248 Aldo/keto reductase family NZD89_23410 PF02492 CobW/HypB/UreG, nucleotide-binding domain NZD89_23415 PF01730 UreF NZD89_23420 PF05194 UreE urease accessory protein, C-terminal domain NZD89_23420 PF02814 UreE urease accessory protein, N-terminal domain NZD89_23425 PF01979 Amidohydrolase family NZD89_23425 PF00449 Urease alpha-subunit, N-terminal domain NZD89_23430 PF00547 Urease, gamma subunit NZD89_23430 PF00699 Urease beta subunit NZD89_23440 PF00857 Isochorismatase family NZD89_23455 PF00296 Luciferase-like monooxygenase NZD89_23460 PF01613 Flavin reductase like domain NZD89_23465 PF09339 IclR helix-turn-helix domain NZD89_23465 PF01614 Bacterial transcriptional regulator NZD89_23470 PF00866 Ring hydroxylating beta subunit NZD89_23475 PF00355 Rieske [2Fe-2S] domain NZD89_23475 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NZD89_23480 PF07690 Major Facilitator Superfamily NZD89_23485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_23485 PF00512 His Kinase A (phospho-acceptor) domain NZD89_23490 PF01230 HIT domain NZD89_23500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_23500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_23505 PF07687 Peptidase dimerisation domain NZD89_23505 PF01546 Peptidase family M20/M25/M40 NZD89_23510 PF01425 Amidase NZD89_23520 PF01425 Amidase NZD89_23530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NZD89_23535 PF00324 Amino acid permease NZD89_23540 PF02954 Bacterial regulatory protein, Fis family NZD89_23540 PF13426 PAS domain NZD89_23540 PF00158 Sigma-54 interaction domain NZD89_23545 PF00171 Aldehyde dehydrogenase family NZD89_23550 PF00202 Aminotransferase class-III NZD89_23555 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NZD89_23555 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NZD89_23560 PF00491 Arginase family NZD89_23565 PF07694 5TMR of 5TMR-LYT NZD89_23565 PF00990 Diguanylate cyclase, GGDEF domain NZD89_23575 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase NZD89_23580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NZD89_23580 PF05227 CHASE3 domain NZD89_23580 PF00672 HAMP domain NZD89_23590 PF12833 Helix-turn-helix domain NZD89_23590 PF02805 Metal binding domain of Ada NZD89_23595 PF00892 EamA-like transporter family NZD89_23605 PF00155 Aminotransferase class I and II NZD89_23610 PF00202 Aminotransferase class-III NZD89_23635 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NZD89_23635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NZD89_23640 PF07690 Major Facilitator Superfamily NZD89_23645 PF02734 DAK2 domain NZD89_23650 PF02733 Dak1 domain NZD89_23655 PF02502 Ribose/Galactose Isomerase NZD89_23665 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_23665 PF00107 Zinc-binding dehydrogenase NZD89_23670 PF00455 DeoR C terminal sensor domain NZD89_23670 PF08220 DeoR-like helix-turn-helix domain NZD89_23675 PF07690 Major Facilitator Superfamily NZD89_23685 PF01676 Metalloenzyme superfamily NZD89_23690 PF01168 Alanine racemase, N-terminal domain NZD89_23700 PF00155 Aminotransferase class I and II NZD89_23705 PF02126 Phosphotriesterase family NZD89_23710 PF10797 Protein of unknown function NZD89_23715 PF10941 Protein of unknown function DUF2620 NZD89_23725 PF14502 Helix-turn-helix domain NZD89_23725 PF14503 YhfZ C-terminal domain NZD89_23735 PF03061 Thioesterase superfamily NZD89_23745 PF02702 Osmosensitive K+ channel His kinase sensor domain NZD89_23750 PF02669 K+-transporting ATPase, c chain NZD89_23760 PF03814 Potassium-transporting ATPase A subunit NZD89_23765 PF03814 Potassium-transporting ATPase A subunit NZD89_23775 PF03814 Potassium-transporting ATPase A subunit NZD89_23780 PF02702 Osmosensitive K+ channel His kinase sensor domain NZD89_23780 PF13493 Domain of unknown function (DUF4118) NZD89_23780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_23780 PF00512 His Kinase A (phospho-acceptor) domain NZD89_23785 PF00072 Response regulator receiver domain NZD89_23785 PF00486 Transcriptional regulatory protein, C terminal NZD89_23790 PF01053 Cys/Met metabolism PLP-dependent enzyme NZD89_23805 PF14883 Hypothetical glycosyl hydrolase family 13 NZD89_23805 PF01522 Polysaccharide deacetylase NZD89_23820 PF02659 Putative manganese efflux pump NZD89_23835 PF01476 LysM domain NZD89_23835 PF00704 Glycosyl hydrolases family 18 NZD89_23850 PF00892 EamA-like transporter family NZD89_23855 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase NZD89_23885 PF13520 Amino acid permease NZD89_23890 PF03372 Endonuclease/Exonuclease/phosphatase family NZD89_23895 PF02614 Glucuronate isomerase NZD89_23900 PF01081 KDPG and KHG aldolase NZD89_23905 PF00294 pfkB family carbohydrate kinase NZD89_23910 PF01232 Mannitol dehydrogenase Rossmann domain NZD89_23910 PF08125 Mannitol dehydrogenase C-terminal domain NZD89_23915 PF08666 SAF domain NZD89_23915 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NZD89_23920 PF00083 Sugar (and other) transporter NZD89_23925 PF00356 Bacterial regulatory proteins, lacI family NZD89_23930 PF01758 Sodium Bile acid symporter family NZD89_23940 PF17754 MftR C-terminal domain NZD89_23940 PF00440 Bacterial regulatory proteins, tetR family NZD89_23945 PF07690 Major Facilitator Superfamily NZD89_23950 PF00535 Glycosyl transferase family 2 NZD89_23960 PF03737 Aldolase/RraA NZD89_23965 PF02585 GlcNAc-PI de-N-acetylase NZD89_23970 PF07729 FCD domain NZD89_23970 PF00392 Bacterial regulatory proteins, gntR family NZD89_23975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NZD89_23980 PF07690 Major Facilitator Superfamily NZD89_23985 PF01925 Sulfite exporter TauE/SafE NZD89_23995 PF01758 Sodium Bile acid symporter family NZD89_24000 PF07690 Major Facilitator Superfamily NZD89_24010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NZD89_24010 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_24015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NZD89_24015 PF00364 Biotin-requiring enzyme NZD89_24015 PF02817 e3 binding domain NZD89_24020 PF02779 Transketolase, pyrimidine binding domain NZD89_24020 PF02780 Transketolase, C-terminal domain NZD89_24025 PF00676 Dehydrogenase E1 component NZD89_24030 PF01614 Bacterial transcriptional regulator NZD89_24030 PF09339 IclR helix-turn-helix domain NZD89_24045 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_24050 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_24055 PF00392 Bacterial regulatory proteins, gntR family NZD89_24075 PF00480 ROK family NZD89_24085 PF00356 Bacterial regulatory proteins, lacI family NZD89_24090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_24090 PF00005 ABC transporter NZD89_24095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_24095 PF00005 ABC transporter NZD89_24100 PF12911 N-terminal TM domain of oligopeptide transport permease C NZD89_24100 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_24105 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_24115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_24120 PF09261 Alpha mannosidase middle domain NZD89_24120 PF07748 Glycosyl hydrolases family 38 C-terminal domain NZD89_24120 PF01074 Glycosyl hydrolases family 38 N-terminal domain NZD89_24140 PF07690 Major Facilitator Superfamily NZD89_24145 PF00795 Carbon-nitrogen hydrolase NZD89_24150 PF03737 Aldolase/RraA NZD89_24170 PF08818 Domain of unknown function (DU1801) NZD89_24195 PF03682 Uncharacterised protein family (UPF0158) NZD89_24200 PF01548 Transposase NZD89_24200 PF02371 Transposase IS116/IS110/IS902 family NZD89_24230 PF00486 Transcriptional regulatory protein, C terminal NZD89_24230 PF00072 Response regulator receiver domain NZD89_24235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_24235 PF00512 His Kinase A (phospho-acceptor) domain NZD89_24240 PF03422 Carbohydrate binding module (family 6) NZD89_24240 PF00331 Glycosyl hydrolase family 10 NZD89_24240 PF00553 Cellulose binding domain NZD89_24245 PF00005 ABC transporter NZD89_24245 PF00664 ABC transporter transmembrane region NZD89_24250 PF00664 ABC transporter transmembrane region NZD89_24250 PF00005 ABC transporter NZD89_24305 PF01522 Polysaccharide deacetylase NZD89_24310 PF00487 Fatty acid desaturase NZD89_24320 PF00313 'Cold-shock' DNA-binding domain NZD89_24325 PF00293 NUDIX domain NZD89_24340 PF00583 Acetyltransferase (GNAT) family NZD89_24350 PF00753 Metallo-beta-lactamase superfamily NZD89_24360 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NZD89_24360 PF01348 Type II intron maturase NZD89_24365 PF01695 IstB-like ATP binding protein NZD89_24370 PF02796 Helix-turn-helix domain of resolvase NZD89_24370 PF00665 Integrase core domain NZD89_24420 PF09335 SNARE associated Golgi protein NZD89_24435 PF07690 Major Facilitator Superfamily NZD89_24440 PF00083 Sugar (and other) transporter NZD89_24445 PF04303 PrpF protein NZD89_24455 PF00890 FAD binding domain NZD89_24455 PF14537 Cytochrome c3 NZD89_24490 PF00128 Alpha amylase, catalytic domain NZD89_24505 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain NZD89_24510 PF00005 ABC transporter NZD89_24510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_24515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_24515 PF00005 ABC transporter NZD89_24525 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_24545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_24550 PF00356 Bacterial regulatory proteins, lacI family NZD89_24555 PF00933 Glycosyl hydrolase family 3 N terminal domain NZD89_24555 PF14310 Fibronectin type III-like domain NZD89_24555 PF01915 Glycosyl hydrolase family 3 C-terminal domain NZD89_24560 PF01548 Transposase NZD89_24560 PF02371 Transposase IS116/IS110/IS902 family NZD89_24590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NZD89_24590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NZD89_24595 PF00877 NlpC/P60 family NZD89_24620 PF01636 Phosphotransferase enzyme family NZD89_24660 PF01609 Transposase DDE domain NZD89_24675 PF01548 Transposase NZD89_24675 PF02371 Transposase IS116/IS110/IS902 family NZD89_24685 PF02423 Ornithine cyclodeaminase/mu-crystallin family NZD89_24700 PF00561 alpha/beta hydrolase fold NZD89_24705 PF00248 Aldo/keto reductase family NZD89_24715 PF02627 Carboxymuconolactone decarboxylase family NZD89_24720 PF07690 Major Facilitator Superfamily NZD89_24725 PF00248 Aldo/keto reductase family NZD89_24735 PF00440 Bacterial regulatory proteins, tetR family NZD89_24755 PF00892 EamA-like transporter family NZD89_24770 PF00753 Metallo-beta-lactamase superfamily NZD89_24780 PF01042 Endoribonuclease L-PSP NZD89_24785 PF00106 short chain dehydrogenase NZD89_24790 PF00440 Bacterial regulatory proteins, tetR family NZD89_24810 PF01609 Transposase DDE domain NZD89_24840 PF00239 Resolvase, N terminal domain NZD89_24840 PF02796 Helix-turn-helix domain of resolvase NZD89_24845 PF00067 Cytochrome P450 NZD89_24850 PF13537 Glutamine amidotransferase domain NZD89_24850 PF00733 Asparagine synthase NZD89_24860 PF00067 Cytochrome P450 NZD89_24865 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_24865 PF00107 Zinc-binding dehydrogenase NZD89_24870 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_24875 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_24900 PF05598 Transposase domain (DUF772) NZD89_24910 PF01548 Transposase NZD89_24910 PF02371 Transposase IS116/IS110/IS902 family NZD89_24925 PF01878 EVE domain NZD89_24930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NZD89_24930 PF01348 Type II intron maturase NZD89_24935 PF02796 Helix-turn-helix domain of resolvase NZD89_24935 PF00665 Integrase core domain NZD89_24940 PF01695 IstB-like ATP binding protein NZD89_24945 PF00583 Acetyltransferase (GNAT) family NZD89_24985 PF01668 SmpB protein NZD89_24990 PF17876 Cold shock domain NZD89_24990 PF00773 RNB domain NZD89_24990 PF08206 Ribonuclease B OB domain NZD89_24990 PF00575 S1 RNA binding domain NZD89_24995 PF03840 Preprotein translocase SecG subunit NZD89_25000 PF03952 Enolase, N-terminal domain NZD89_25000 PF00113 Enolase, C-terminal TIM barrel domain NZD89_25005 PF01676 Metalloenzyme superfamily NZD89_25005 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NZD89_25010 PF00121 Triosephosphate isomerase NZD89_25015 PF00162 Phosphoglycerate kinase NZD89_25025 PF00989 PAS fold NZD89_25025 PF00512 His Kinase A (phospho-acceptor) domain NZD89_25025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_25030 PF08439 Oligopeptidase F NZD89_25030 PF01432 Peptidase family M3 NZD89_25035 PF02885 Glycosyl transferase family, helical bundle domain NZD89_25035 PF00591 Glycosyl transferase family, a/b domain NZD89_25035 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NZD89_25045 PF05681 Fumarate hydratase (Fumerase) NZD89_25045 PF05683 Fumarase C-terminus NZD89_25055 PF07875 Coat F domain NZD89_25065 PF04070 Domain of unknown function (DUF378) NZD89_25070 PF02261 Aspartate decarboxylase NZD89_25085 PF05698 Bacterial trigger factor protein (TF) C-terminus NZD89_25105 PF00561 alpha/beta hydrolase fold NZD89_25110 PF03949 Malic enzyme, NAD binding domain NZD89_25110 PF00390 Malic enzyme, N-terminal domain NZD89_25115 PF02569 Pantoate-beta-alanine ligase NZD89_25120 PF02548 Ketopantoate hydroxymethyltransferase NZD89_25125 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NZD89_25125 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NZD89_25130 PF00072 Response regulator receiver domain NZD89_25140 PF00403 Heavy-metal-associated domain NZD89_25150 PF07690 Major Facilitator Superfamily NZD89_25155 PF13411 MerR HTH family regulatory protein NZD89_25160 PF00753 Metallo-beta-lactamase superfamily NZD89_25165 PF01938 TRAM domain NZD89_25165 PF05958 tRNA (Uracil-5-)-methyltransferase NZD89_25165 PF02475 Met-10+ like-protein NZD89_25170 PF02934 GatB/GatE catalytic domain NZD89_25170 PF02637 GatB domain NZD89_25175 PF01425 Amidase NZD89_25180 PF02686 Glu-tRNAGln amidotransferase C subunit NZD89_25185 PF00953 Glycosyl transferase family 4 NZD89_25195 PF00533 BRCA1 C Terminus (BRCT) domain NZD89_25195 PF01653 NAD-dependent DNA ligase adenylation domain NZD89_25195 PF03120 NAD-dependent DNA ligase OB-fold domain NZD89_25195 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NZD89_25195 PF12826 Helix-hairpin-helix motif NZD89_25200 PF00580 UvrD/REP helicase N-terminal domain NZD89_25200 PF13361 UvrD-like helicase C-terminal domain NZD89_25225 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_25225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_25230 PF00480 ROK family NZD89_25235 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase NZD89_25245 PF01380 SIS domain NZD89_25245 PF01418 Helix-turn-helix domain, rpiR family NZD89_25260 PF00005 ABC transporter NZD89_25260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_25265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_25265 PF00005 ABC transporter NZD89_25270 PF12911 N-terminal TM domain of oligopeptide transport permease C NZD89_25270 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_25275 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_25280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_25285 PF14883 Hypothetical glycosyl hydrolase family 13 NZD89_25285 PF01522 Polysaccharide deacetylase NZD89_25305 PF02308 MgtC family NZD89_25310 PF03009 Glycerophosphoryl diester phosphodiesterase family NZD89_25315 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_25320 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_25340 PF01476 LysM domain NZD89_25340 PF03734 L,D-transpeptidase catalytic domain NZD89_25345 PF00067 Cytochrome P450 NZD89_25355 PF00990 Diguanylate cyclase, GGDEF domain NZD89_25370 PF00465 Iron-containing alcohol dehydrogenase NZD89_25375 PF16363 GDP-mannose 4,6 dehydratase NZD89_25385 PF00248 Aldo/keto reductase family NZD89_25400 PF01596 O-methyltransferase NZD89_25405 PF00664 ABC transporter transmembrane region NZD89_25405 PF00005 ABC transporter NZD89_25410 PF00664 ABC transporter transmembrane region NZD89_25410 PF00005 ABC transporter NZD89_25415 PF07943 Penicillin-binding protein 5, C-terminal domain NZD89_25415 PF00768 D-alanyl-D-alanine carboxypeptidase NZD89_25420 PF02628 Cytochrome oxidase assembly protein NZD89_25425 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NZD89_25430 PF00510 Cytochrome c oxidase subunit III NZD89_25435 PF00115 Cytochrome C and Quinol oxidase polypeptide I NZD89_25440 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NZD89_25450 PF01202 Shikimate kinase NZD89_25460 PF07690 Major Facilitator Superfamily NZD89_25465 PF03471 Transporter associated domain NZD89_25465 PF00999 Sodium/hydrogen exchanger family NZD89_25465 PF02080 TrkA-C domain NZD89_25475 PF07690 Major Facilitator Superfamily NZD89_25480 PF12706 Beta-lactamase superfamily domain NZD89_25480 PF00753 Metallo-beta-lactamase superfamily NZD89_25485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NZD89_25490 PF02086 D12 class N6 adenine-specific DNA methyltransferase NZD89_25505 PF08279 HTH domain NZD89_25505 PF02829 3H domain NZD89_25515 PF04293 SpoVR like protein NZD89_25520 PF04285 Protein of unknown function (DUF444) NZD89_25525 PF06798 PrkA serine protein kinase C-terminal domain NZD89_25525 PF08298 PrkA AAA domain NZD89_25530 PF07690 Major Facilitator Superfamily NZD89_25540 PF00676 Dehydrogenase E1 component NZD89_25545 PF02779 Transketolase, pyrimidine binding domain NZD89_25545 PF02780 Transketolase, C-terminal domain NZD89_25550 PF02817 e3 binding domain NZD89_25550 PF00364 Biotin-requiring enzyme NZD89_25550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NZD89_25555 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_25555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NZD89_25565 PF00588 SpoU rRNA Methylase family NZD89_25570 PF12671 Putative amidase domain NZD89_25575 PF01614 Bacterial transcriptional regulator NZD89_25575 PF09339 IclR helix-turn-helix domain NZD89_25580 PF00180 Isocitrate/isopropylmalate dehydrogenase NZD89_25590 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NZD89_25590 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NZD89_25595 PF08331 Domain of unknown function (DUF1730) NZD89_25600 PF00075 RNase H NZD89_25615 PF03323 Bacillus/Clostridium GerA spore germination protein NZD89_25625 PF10576 Iron-sulfur binding domain of endonuclease III NZD89_25625 PF00633 Helix-hairpin-helix motif NZD89_25625 PF00730 HhH-GPD superfamily base excision DNA repair protein NZD89_25635 PF06335 Protein of unknown function (DUF1054) NZD89_25640 PF13482 RNase_H superfamily NZD89_25645 PF00270 DEAD/DEAH box helicase NZD89_25645 PF09369 Domain of unknown function (DUF1998) NZD89_25645 PF00271 Helicase conserved C-terminal domain NZD89_25660 PF01594 AI-2E family transporter NZD89_25675 PF00392 Bacterial regulatory proteins, gntR family NZD89_25675 PF07729 FCD domain NZD89_25680 PF08264 Anticodon-binding domain of tRNA NZD89_25680 PF13603 Leucyl-tRNA synthetase, Domain 2 NZD89_25680 PF09334 tRNA synthetases class I (M) NZD89_25680 PF00133 tRNA synthetases class I (I, L, M and V) NZD89_25685 PF01027 Inhibitor of apoptosis-promoting Bax1 NZD89_25690 PF14815 NUDIX domain NZD89_25690 PF00730 HhH-GPD superfamily base excision DNA repair protein NZD89_25710 PF00381 PTS HPr component phosphorylation site NZD89_25715 PF02650 WhiA C-terminal HTH domain NZD89_25715 PF14527 WhiA LAGLIDADG-like domain NZD89_25715 PF10298 WhiA N-terminal LAGLIDADG-like domain NZD89_25720 PF01933 Uncharacterised protein family UPF0052 NZD89_25725 PF03668 P-loop ATPase protein family NZD89_25730 PF00293 NUDIX domain NZD89_25740 PF03485 Arginyl tRNA synthetase N terminal domain NZD89_25740 PF05746 DALR anticodon binding domain NZD89_25740 PF00750 tRNA synthetases class I (R) NZD89_25750 PF07475 HPr Serine kinase C-terminal domain NZD89_25750 PF02603 HPr Serine kinase N terminus NZD89_25755 PF17755 UvrA DNA-binding domain NZD89_25755 PF17760 UvrA interaction domain NZD89_25755 PF00005 ABC transporter NZD89_25760 PF12344 Ultra-violet resistance protein B NZD89_25760 PF02151 UvrB/uvrC motif NZD89_25760 PF04851 Type III restriction enzyme, res subunit NZD89_25760 PF00271 Helicase conserved C-terminal domain NZD89_25760 PF17757 UvrB interaction domain NZD89_25765 PF00691 OmpA family NZD89_25765 PF13677 Membrane MotB of proton-channel complex MotA/MotB NZD89_25770 PF01618 MotA/TolQ/ExbB proton channel family NZD89_25780 PF18075 FtsX extracellular domain NZD89_25780 PF02687 FtsX-like permease family NZD89_25785 PF00005 ABC transporter NZD89_25790 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NZD89_25790 PF13378 Enolase C-terminal domain-like NZD89_25795 PF07690 Major Facilitator Superfamily NZD89_25805 PF02602 Uroporphyrinogen-III synthase HemD NZD89_25930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_25930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_25935 PF00356 Bacterial regulatory proteins, lacI family NZD89_25940 PF07690 Major Facilitator Superfamily NZD89_25945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_25945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_25950 PF00355 Rieske [2Fe-2S] domain NZD89_25955 PF00596 Class II Aldolase and Adducin N-terminal domain NZD89_25960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_25960 PF03466 LysR substrate binding domain NZD89_25965 PF09084 NMT1/THI5 like NZD89_25970 PF02632 BioY family NZD89_25975 PF00005 ABC transporter NZD89_25980 PF00005 ABC transporter NZD89_25985 PF00698 Acyl transferase domain NZD89_25985 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_25985 PF08990 Erythronolide synthase docking NZD89_25985 PF16197 Ketoacyl-synthetase C-terminal extension NZD89_25985 PF00109 Beta-ketoacyl synthase, N-terminal domain NZD89_25985 PF02801 Beta-ketoacyl synthase, C-terminal domain NZD89_25985 PF08659 KR domain NZD89_25985 PF00550 Phosphopantetheine attachment site NZD89_25985 PF14765 Polyketide synthase dehydratase NZD89_25990 PF01507 Phosphoadenosine phosphosulfate reductase family NZD89_25995 PF00551 Formyl transferase NZD89_26000 PF00155 Aminotransferase class I and II NZD89_26005 PF07690 Major Facilitator Superfamily NZD89_26010 PF00860 Permease family NZD89_26020 PF02673 Bacitracin resistance protein BacA NZD89_26025 PF05163 DinB family NZD89_26030 PF02627 Carboxymuconolactone decarboxylase family NZD89_26055 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NZD89_26055 PF02843 Phosphoribosylglycinamide synthetase, C domain NZD89_26055 PF02844 Phosphoribosylglycinamide synthetase, N domain NZD89_26060 PF02142 MGS-like domain NZD89_26060 PF01808 AICARFT/IMPCHase bienzyme NZD89_26065 PF00586 AIR synthase related protein, N-terminal domain NZD89_26065 PF02769 AIR synthase related protein, C-terminal domain NZD89_26070 PF00156 Phosphoribosyl transferase domain NZD89_26075 PF00586 AIR synthase related protein, N-terminal domain NZD89_26075 PF02769 AIR synthase related protein, C-terminal domain NZD89_26075 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NZD89_26085 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase NZD89_26090 PF01259 SAICAR synthetase NZD89_26095 PF10397 Adenylosuccinate lyase C-terminus NZD89_26095 PF00206 Lyase NZD89_26100 PF00860 Permease family NZD89_26105 PF00117 Glutamine amidotransferase class-I NZD89_26105 PF02540 NAD synthase NZD89_26105 PF00958 GMP synthase C terminal domain NZD89_26110 PF11992 Domain of unknown function (DUF3488) NZD89_26110 PF01841 Transglutaminase-like superfamily NZD89_26110 PF13559 Domain of unknown function (DUF4129) NZD89_26120 PF17863 AAA lid domain NZD89_26120 PF07726 ATPase family associated with various cellular activities (AAA) NZD89_26125 PF03734 L,D-transpeptidase catalytic domain NZD89_26125 PF01476 LysM domain NZD89_26145 PF00483 Nucleotidyl transferase NZD89_26150 PF03065 Glycosyl hydrolase family 57 NZD89_26150 PF09210 Domain of unknown function (DUF1957) NZD89_26160 PF00118 TCP-1/cpn60 chaperonin family NZD89_26165 PF00166 Chaperonin 10 Kd subunit NZD89_26175 PF02464 Competence-damaged protein NZD89_26175 PF00994 Probable molybdopterin binding domain NZD89_26185 PF01812 5-formyltetrahydrofolate cyclo-ligase family NZD89_26190 PF01569 PAP2 superfamily NZD89_26195 PF12848 ABC transporter NZD89_26195 PF00005 ABC transporter NZD89_26195 PF16326 ABC transporter C-terminal domain NZD89_26200 PF00814 Glycoprotease family NZD89_26205 PF00583 Acetyltransferase (GNAT) family NZD89_26210 PF00814 Glycoprotease family NZD89_26215 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NZD89_26220 PF00586 AIR synthase related protein, N-terminal domain NZD89_26220 PF02769 AIR synthase related protein, C-terminal domain NZD89_26245 PF07722 Peptidase C26 NZD89_26250 PF05221 S-adenosyl-L-homocysteine hydrolase NZD89_26250 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NZD89_26255 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NZD89_26265 PF00842 Alanine racemase, C-terminal domain NZD89_26265 PF01168 Alanine racemase, N-terminal domain NZD89_26275 PF01256 Carbohydrate kinase NZD89_26275 PF03853 YjeF-related protein N-terminus NZD89_26280 PF01648 4'-phosphopantetheinyl transferase superfamily NZD89_26290 PF00557 Metallopeptidase family M24 NZD89_26300 PF01751 Toprim domain NZD89_26310 PF00085 Thioredoxin NZD89_26315 PF01741 Large-conductance mechanosensitive channel, MscL NZD89_26320 PF02608 ABC transporter substrate-binding protein PnrA-like NZD89_26325 PF00005 ABC transporter NZD89_26330 PF02653 Branched-chain amino acid transport system / permease component NZD89_26335 PF02653 Branched-chain amino acid transport system / permease component NZD89_26340 PF00483 Nucleotidyl transferase NZD89_26340 PF01050 Mannose-6-phosphate isomerase NZD89_26345 PF00857 Isochorismatase family NZD89_26350 PF00905 Penicillin binding protein transpeptidase domain NZD89_26350 PF00912 Transglycosylase NZD89_26360 PF07301 Protein of unknown function (DUF1453) NZD89_26370 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NZD89_26370 PF13457 GW (Gly-Tryp) dipeptide domain NZD89_26385 PF13426 PAS domain NZD89_26385 PF00512 His Kinase A (phospho-acceptor) domain NZD89_26385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_26385 PF13188 PAS domain NZD89_26385 PF00989 PAS fold NZD89_26390 PF13614 AAA domain NZD89_26400 PF13419 Haloacid dehalogenase-like hydrolase NZD89_26440 PF00482 Type II secretion system (T2SS), protein F NZD89_26445 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NZD89_26445 PF00437 Type II/IV secretion system protein NZD89_26470 PF02308 MgtC family NZD89_26475 PF01966 HD domain NZD89_26475 PF00072 Response regulator receiver domain NZD89_26495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_26495 PF00512 His Kinase A (phospho-acceptor) domain NZD89_26495 PF00989 PAS fold NZD89_26495 PF13188 PAS domain NZD89_26495 PF13426 PAS domain NZD89_26500 PF01740 STAS domain NZD89_26500 PF00916 Sulfate permease family NZD89_26505 PF00248 Aldo/keto reductase family NZD89_26515 PF00877 NlpC/P60 family NZD89_26515 PF01476 LysM domain NZD89_26515 PF08239 Bacterial SH3 domain NZD89_26520 PF00849 RNA pseudouridylate synthase NZD89_26535 PF00535 Glycosyl transferase family 2 NZD89_26540 PF00483 Nucleotidyl transferase NZD89_26550 PF17645 Arylmalonate decarboxylase NZD89_26555 PF07690 Major Facilitator Superfamily NZD89_26560 PF07729 FCD domain NZD89_26560 PF00392 Bacterial regulatory proteins, gntR family NZD89_26565 PF00111 2Fe-2S iron-sulfur cluster binding domain NZD89_26565 PF01799 [2Fe-2S] binding domain NZD89_26575 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NZD89_26575 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NZD89_26580 PF01717 Cobalamin-independent synthase, Catalytic domain NZD89_26585 PF01471 Putative peptidoglycan binding domain NZD89_26585 PF04717 Type VI secretion system, phage-baseplate injector NZD89_26590 PF00704 Glycosyl hydrolases family 18 NZD89_26600 PF07690 Major Facilitator Superfamily NZD89_26605 PF03328 HpcH/HpaI aldolase/citrate lyase family NZD89_26610 PF02515 CoA-transferase family III NZD89_26615 PF00497 Bacterial extracellular solute-binding proteins, family 3 NZD89_26620 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_26625 PF00005 ABC transporter NZD89_26630 PF00300 Histidine phosphatase superfamily (branch 1) NZD89_26630 PF13456 Reverse transcriptase-like NZD89_26640 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NZD89_26640 PF07685 CobB/CobQ-like glutamine amidotransferase domain NZD89_26645 PF11761 Cobalamin biosynthesis central region NZD89_26645 PF11760 Cobalamin synthesis G N-terminal NZD89_26645 PF01890 Cobalamin synthesis G C-terminus NZD89_26650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NZD89_26655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NZD89_26660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NZD89_26665 PF01888 CbiD NZD89_26670 PF02570 Precorrin-8X methylmutase NZD89_26675 PF02571 Precorrin-6x reductase CbiJ/CobK NZD89_26680 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NZD89_26680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NZD89_26685 PF10414 Sirohaem synthase dimerisation region NZD89_26685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NZD89_26685 PF14824 Sirohaem biosynthesis protein central NZD89_26690 PF01903 CbiX NZD89_26695 PF00899 ThiF family NZD89_26700 PF02581 Thiamine monophosphate synthase NZD89_26705 PF01266 FAD dependent oxidoreductase NZD89_26715 PF05690 Thiazole biosynthesis protein ThiG NZD89_26720 PF13667 ThiC-associated domain NZD89_26720 PF01964 Radical SAM ThiC family NZD89_26725 PF09819 ABC-type cobalt transport system, permease component NZD89_26730 PF13520 Amino acid permease NZD89_26735 PF00480 ROK family NZD89_26735 PF01047 MarR family NZD89_26740 PF03631 Virulence factor BrkB NZD89_26755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_26760 PF12833 Helix-turn-helix domain NZD89_26765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NZD89_26765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NZD89_26770 PF00722 Glycosyl hydrolases family 16 NZD89_26780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NZD89_26780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NZD89_26780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NZD89_26795 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NZD89_26795 PF13457 GW (Gly-Tryp) dipeptide domain NZD89_26805 PF00005 ABC transporter NZD89_26805 PF02687 FtsX-like permease family NZD89_26805 PF12704 MacB-like periplasmic core domain NZD89_26810 PF00005 ABC transporter NZD89_26810 PF02687 FtsX-like permease family NZD89_26810 PF12704 MacB-like periplasmic core domain NZD89_26825 PF04138 GtrA-like protein NZD89_26830 PF00535 Glycosyl transferase family 2 NZD89_26835 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase NZD89_26840 PF00873 AcrB/AcrD/AcrF family NZD89_26855 PF07690 Major Facilitator Superfamily NZD89_26865 PF07690 Major Facilitator Superfamily NZD89_26870 PF00701 Dihydrodipicolinate synthetase family NZD89_26875 PF00701 Dihydrodipicolinate synthetase family NZD89_26880 PF02733 Dak1 domain NZD89_26880 PF02734 DAK2 domain NZD89_26885 PF02733 Dak1 domain NZD89_26890 PF07729 FCD domain NZD89_26890 PF00392 Bacterial regulatory proteins, gntR family NZD89_26895 PF07690 Major Facilitator Superfamily NZD89_26915 PF07690 Major Facilitator Superfamily NZD89_26925 PF02371 Transposase IS116/IS110/IS902 family NZD89_26925 PF01548 Transposase NZD89_26940 PF02954 Bacterial regulatory protein, Fis family NZD89_26940 PF00158 Sigma-54 interaction domain NZD89_26940 PF13426 PAS domain NZD89_26950 PF00107 Zinc-binding dehydrogenase NZD89_26950 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_26960 PF02126 Phosphotriesterase family NZD89_26975 PF02796 Helix-turn-helix domain of resolvase NZD89_26975 PF00665 Integrase core domain NZD89_26980 PF01695 IstB-like ATP binding protein NZD89_26995 PF00589 Phage integrase family NZD89_26995 PF02899 Phage integrase, N-terminal SAM-like domain NZD89_27015 PF01580 FtsK/SpoIIIE family NZD89_27015 PF12538 DNA transporter NZD89_27030 PF02899 Phage integrase, N-terminal SAM-like domain NZD89_27030 PF00589 Phage integrase family NZD89_27050 PF12538 DNA transporter NZD89_27050 PF01580 FtsK/SpoIIIE family NZD89_27060 PF01205 Uncharacterized protein family UPF0029 NZD89_27060 PF09186 Domain of unknown function (DUF1949) NZD89_27085 PF07977 FabA-like domain NZD89_27090 PF01066 CDP-alcohol phosphatidyltransferase NZD89_27095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NZD89_27095 PF00460 Flagella basal body rod protein NZD89_27100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NZD89_27100 PF00460 Flagella basal body rod protein NZD89_27110 PF12116 Stage III sporulation protein D NZD89_27115 PF01551 Peptidase family M23 NZD89_27125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NZD89_27145 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NZD89_27145 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NZD89_27150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NZD89_27150 PF02874 ATP synthase alpha/beta family, beta-barrel domain NZD89_27155 PF00231 ATP synthase NZD89_27160 PF00306 ATP synthase alpha/beta chain, C terminal domain NZD89_27160 PF02874 ATP synthase alpha/beta family, beta-barrel domain NZD89_27160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NZD89_27165 PF00213 ATP synthase delta (OSCP) subunit NZD89_27170 PF00430 ATP synthase B/B' CF(0) NZD89_27175 PF00137 ATP synthase subunit C NZD89_27180 PF00119 ATP synthase A chain NZD89_27195 PF02350 UDP-N-acetylglucosamine 2-epimerase NZD89_27210 PF00464 Serine hydroxymethyltransferase NZD89_27215 PF04260 Protein of unknown function (DUF436) NZD89_27225 PF01451 Low molecular weight phosphotyrosine protein phosphatase NZD89_27230 PF02659 Putative manganese efflux pump NZD89_27240 PF00877 NlpC/P60 family NZD89_27260 PF02310 B12 binding domain NZD89_27260 PF01642 Methylmalonyl-CoA mutase NZD89_27265 PF00440 Bacterial regulatory proteins, tetR family NZD89_27265 PF08359 YsiA-like protein, C-terminal region NZD89_27270 PF03481 Putative GTP-binding controlling metal-binding NZD89_27270 PF01300 Telomere recombination NZD89_27275 PF09551 Stage II sporulation protein R (spore_II_R) NZD89_27280 PF17827 PrmC N-terminal domain NZD89_27280 PF05175 Methyltransferase small domain NZD89_27285 PF03462 PCRF domain NZD89_27285 PF00472 RF-1 domain NZD89_27290 PF01197 Ribosomal protein L31 NZD89_27300 PF07498 Rho termination factor, N-terminal domain NZD89_27300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NZD89_27300 PF07497 Rho termination factor, RNA-binding domain NZD89_27305 PF00923 Transaldolase/Fructose-6-phosphate aldolase NZD89_27310 PF00072 Response regulator receiver domain NZD89_27315 PF06418 CTP synthase N-terminus NZD89_27315 PF00117 Glutamine amidotransferase class-I NZD89_27320 PF05066 HB1, ASXL, restriction endonuclease HTH domain NZD89_27330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NZD89_27330 PF02770 Acyl-CoA dehydrogenase, middle domain NZD89_27330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NZD89_27335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NZD89_27335 PF02770 Acyl-CoA dehydrogenase, middle domain NZD89_27335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NZD89_27340 PF00378 Enoyl-CoA hydratase/isomerase NZD89_27345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NZD89_27345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NZD89_27350 PF02803 Thiolase, C-terminal domain NZD89_27350 PF00108 Thiolase, N-terminal domain NZD89_27355 PF02754 Cysteine-rich domain NZD89_27355 PF13183 4Fe-4S dicluster domain NZD89_27360 PF00535 Glycosyl transferase family 2 NZD89_27360 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase NZD89_27375 PF00491 Arginase family NZD89_27380 PF17284 Spermidine synthase tetramerisation domain NZD89_27385 PF00912 Transglycosylase NZD89_27385 PF00905 Penicillin binding protein transpeptidase domain NZD89_27390 PF00155 Aminotransferase class I and II NZD89_27420 PF06463 Molybdenum Cofactor Synthesis C NZD89_27420 PF04055 Radical SAM superfamily NZD89_27425 PF01546 Peptidase family M20/M25/M40 NZD89_27430 PF02142 MGS-like domain NZD89_27435 PF05195 Aminopeptidase P, N-terminal domain NZD89_27435 PF00557 Metallopeptidase family M24 NZD89_27440 PF07690 Major Facilitator Superfamily NZD89_27445 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NZD89_27445 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NZD89_27450 PF00356 Bacterial regulatory proteins, lacI family NZD89_27455 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NZD89_27455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NZD89_27460 PF00485 Phosphoribulokinase / Uridine kinase family NZD89_27465 PF01048 Phosphorylase superfamily NZD89_27470 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal NZD89_27470 PF14602 Hexapeptide repeat of succinyl-transferase NZD89_27470 PF00132 Bacterial transferase hexapeptide (six repeats) NZD89_27475 PF07687 Peptidase dimerisation domain NZD89_27475 PF01546 Peptidase family M20/M25/M40 NZD89_27480 PF00155 Aminotransferase class I and II NZD89_27485 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NZD89_27485 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NZD89_27505 PF03649 Uncharacterised protein family (UPF0014) NZD89_27510 PF00005 ABC transporter NZD89_27515 PF16884 N-terminal domain of oxidoreductase NZD89_27515 PF00107 Zinc-binding dehydrogenase NZD89_27520 PF00909 Ammonium Transporter Family NZD89_27525 PF00543 Nitrogen regulatory protein P-II NZD89_27530 PF00563 EAL domain NZD89_27530 PF03707 Bacterial signalling protein N terminal repeat NZD89_27530 PF00990 Diguanylate cyclase, GGDEF domain NZD89_27535 PF03600 Citrate transporter NZD89_27535 PF02080 TrkA-C domain NZD89_27550 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NZD89_27550 PF06827 Zinc finger found in FPG and IleRS NZD89_27550 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NZD89_27565 PF07552 Spore Coat Protein X and V domain NZD89_27575 PF02811 PHP domain NZD89_27575 PF14716 Helix-hairpin-helix domain NZD89_27575 PF14791 DNA polymerase beta thumb NZD89_27585 PF08281 Sigma-70, region 4 NZD89_27585 PF04542 Sigma-70 region 2 NZD89_27585 PF12680 SnoaL-like domain NZD89_27590 PF00574 Clp protease NZD89_27600 PF02558 Ketopantoate reductase PanE/ApbA NZD89_27600 PF08546 Ketopantoate reductase PanE/ApbA C terminal NZD89_27605 PF00005 ABC transporter NZD89_27605 PF12848 ABC transporter NZD89_27610 PF02073 Thermophilic metalloprotease (M29) NZD89_27625 PF07690 Major Facilitator Superfamily NZD89_27630 PF00156 Phosphoribosyl transferase domain NZD89_27635 PF00860 Permease family NZD89_27640 PF07690 Major Facilitator Superfamily NZD89_27645 PF02590 Predicted SPOUT methyltransferase NZD89_27650 PF13180 PDZ domain NZD89_27670 PF13426 PAS domain NZD89_27670 PF00672 HAMP domain NZD89_27670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_27670 PF00512 His Kinase A (phospho-acceptor) domain NZD89_27675 PF00072 Response regulator receiver domain NZD89_27675 PF00486 Transcriptional regulatory protein, C terminal NZD89_27685 PF00772 DnaB-like helicase N terminal domain NZD89_27685 PF03796 DnaB-like helicase C terminal domain NZD89_27690 PF03948 Ribosomal protein L9, C-terminal domain NZD89_27690 PF01281 Ribosomal protein L9, N-terminal domain NZD89_27705 PF01084 Ribosomal protein S18 NZD89_27710 PF00436 Single-strand binding protein family NZD89_27715 PF01250 Ribosomal protein S6 NZD89_27720 PF01926 50S ribosome-binding GTPase NZD89_27720 PF06071 Protein of unknown function (DUF933) NZD89_27725 PF00384 Molybdopterin oxidoreductase NZD89_27725 PF01568 Molydopterin dinucleotide binding domain NZD89_27725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NZD89_27730 PF06107 Bacterial protein of unknown function (DUF951) NZD89_27735 PF00924 Mechanosensitive ion channel NZD89_27745 PF06866 Protein of unknown function (DUF1256) NZD89_27755 PF04474 Protein of unknown function (DUF554) NZD89_27760 PF17762 HTH domain found in ParB protein NZD89_27760 PF02195 ParB-like nuclease domain NZD89_27765 PF13614 AAA domain NZD89_27770 PF02195 ParB-like nuclease domain NZD89_27770 PF17762 HTH domain found in ParB protein NZD89_27775 PF02527 rRNA small subunit methyltransferase G NZD89_27780 PF13932 GidA associated domain NZD89_27780 PF01134 Glucose inhibited division protein A NZD89_27785 PF01926 50S ribosome-binding GTPase NZD89_27785 PF12631 MnmE helical domain NZD89_27785 PF10396 GTP-binding protein TrmE N-terminus NZD89_27790 PF01424 R3H domain NZD89_27790 PF14804 Jag N-terminus NZD89_27795 PF02096 60Kd inner membrane protein NZD89_27800 PF01809 Putative membrane protein insertion efficiency factor NZD89_27805 PF00825 Ribonuclease P NZD89_27810 PF00468 Ribosomal protein L34 NZD89_27815 PF00589 Phage integrase family NZD89_27820 PF04055 Radical SAM superfamily NZD89_27820 PF06968 Biotin and Thiamin Synthesis associated domain NZD89_27825 PF00202 Aminotransferase class-III NZD89_27830 PF00155 Aminotransferase class I and II NZD89_27840 PF03744 6-carboxyhexanoate--CoA ligase NZD89_27880 PF00486 Transcriptional regulatory protein, C terminal NZD89_27880 PF00072 Response regulator receiver domain NZD89_27935 PF01068 ATP dependent DNA ligase domain NZD89_27935 PF04679 ATP dependent DNA ligase C terminal region NZD89_27955 PF01695 IstB-like ATP binding protein NZD89_27960 PF00665 Integrase core domain NZD89_27960 PF02796 Helix-turn-helix domain of resolvase NZD89_27995 PF00005 ABC transporter NZD89_28065 PF01751 Toprim domain NZD89_28065 PF01131 DNA topoisomerase NZD89_28125 PF01548 Transposase NZD89_28125 PF02371 Transposase IS116/IS110/IS902 family NZD89_28140 PF00817 impB/mucB/samB family NZD89_28140 PF11799 impB/mucB/samB family C-terminal domain NZD89_28165 PF02796 Helix-turn-helix domain of resolvase NZD89_28165 PF00239 Resolvase, N terminal domain NZD89_28175 PF03323 Bacillus/Clostridium GerA spore germination protein NZD89_28180 PF03845 Spore germination protein NZD89_28195 PF02371 Transposase IS116/IS110/IS902 family NZD89_28195 PF01548 Transposase NZD89_28225 PF02796 Helix-turn-helix domain of resolvase NZD89_28225 PF00239 Resolvase, N terminal domain NZD89_28235 PF01566 Natural resistance-associated macrophage protein NZD89_28240 PF01548 Transposase NZD89_28240 PF02371 Transposase IS116/IS110/IS902 family NZD89_28245 PF01548 Transposase NZD89_28245 PF02371 Transposase IS116/IS110/IS902 family NZD89_28250 PF01557 Fumarylacetoacetate (FAA) hydrolase family NZD89_28255 PF03466 LysR substrate binding domain NZD89_28255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NZD89_28260 PF02743 Cache domain NZD89_28260 PF00672 HAMP domain NZD89_28260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NZD89_28265 PF07690 Major Facilitator Superfamily NZD89_28270 PF00392 Bacterial regulatory proteins, gntR family NZD89_28270 PF07729 FCD domain NZD89_28290 PF00037 4Fe-4S binding domain NZD89_28295 PF07992 Pyridine nucleotide-disulphide oxidoreductase NZD89_28315 PF00072 Response regulator receiver domain NZD89_28315 PF00486 Transcriptional regulatory protein, C terminal NZD89_28320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NZD89_28320 PF00512 His Kinase A (phospho-acceptor) domain NZD89_28320 PF00989 PAS fold NZD89_28320 PF16736 Single Cache-like NZD89_28330 PF01548 Transposase NZD89_28330 PF02371 Transposase IS116/IS110/IS902 family NZD89_28345 PF04542 Sigma-70 region 2 NZD89_28345 PF08281 Sigma-70, region 4 NZD89_28350 PF01526 Tn3 transposase DDE domain NZD89_28350 PF13700 Domain of unknown function (DUF4158) NZD89_28355 PF00589 Phage integrase family NZD89_28360 PF06968 Biotin and Thiamin Synthesis associated domain NZD89_28360 PF04055 Radical SAM superfamily NZD89_28365 PF00202 Aminotransferase class-III NZD89_28370 PF00155 Aminotransferase class I and II NZD89_28380 PF03744 6-carboxyhexanoate--CoA ligase NZD89_28400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NZD89_28400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NZD89_28405 PF07690 Major Facilitator Superfamily NZD89_28420 PF02502 Ribose/Galactose Isomerase NZD89_28425 PF02733 Dak1 domain NZD89_28430 PF02734 DAK2 domain NZD89_28435 PF00121 Triosephosphate isomerase NZD89_28440 PF08220 DeoR-like helix-turn-helix domain NZD89_28440 PF00455 DeoR C terminal sensor domain NZD89_28455 PF00589 Phage integrase family NZD89_28470 PF02810 SEC-C motif NZD89_28470 PF07516 SecA Wing and Scaffold domain NZD89_28470 PF01043 SecA preprotein cross-linking domain NZD89_28470 PF07517 SecA DEAD-like domain NZD89_28475 PF01695 IstB-like ATP binding protein NZD89_28485 PF02796 Helix-turn-helix domain of resolvase NZD89_28485 PF00665 Integrase core domain NZD89_28500 PF13443 Cro/C1-type HTH DNA-binding domain NZD89_28565 PF18607 ParA helix turn helix domain NZD89_28565 PF13614 AAA domain NZD89_28590 PF00440 Bacterial regulatory proteins, tetR family NZD89_28605 PF01381 Helix-turn-helix NZD89_28610 PF05598 Transposase domain (DUF772) NZD89_28640 PF13614 AAA domain NZD89_28685 PF00216 Bacterial DNA-binding protein NZD89_28705 PF02796 Helix-turn-helix domain of resolvase NZD89_28705 PF00239 Resolvase, N terminal domain NZD89_28715 PF02734 DAK2 domain NZD89_28720 PF00121 Triosephosphate isomerase NZD89_28725 PF00455 DeoR C terminal sensor domain NZD89_28725 PF08220 DeoR-like helix-turn-helix domain NZD89_28730 PF00455 DeoR C terminal sensor domain NZD89_28730 PF08220 DeoR-like helix-turn-helix domain NZD89_28735 PF00923 Transaldolase/Fructose-6-phosphate aldolase NZD89_28740 PF13610 DDE domain NZD89_28745 PF01037 Lrp/AsnC ligand binding domain NZD89_28750 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_28755 PF00528 Binding-protein-dependent transport system inner membrane component NZD89_28755 PF12911 N-terminal TM domain of oligopeptide transport permease C NZD89_28760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_28760 PF00005 ABC transporter NZD89_28765 PF00005 ABC transporter NZD89_28765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NZD89_28770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NZD89_28775 PF07676 WD40-like Beta Propeller Repeat NZD89_28775 PF00326 Prolyl oligopeptidase family NZD89_28780 PF04951 D-aminopeptidase NZD89_28850 PF02899 Phage integrase, N-terminal SAM-like domain NZD89_28850 PF00589 Phage integrase family NZD89_28860 PF00589 Phage integrase family NZD89_28955 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NZD89_28960 PF01850 PIN domain NZD89_28980 PF01183 Glycosyl hydrolases family 25 NZD89_29010 PF00535 Glycosyl transferase family 2 NZD89_29025 PF00248 Aldo/keto reductase family NZD89_29030 PF00589 Phage integrase family NZD89_29090 PF01548 Transposase NZD89_29090 PF02371 Transposase IS116/IS110/IS902 family NZD89_29120 PF07690 Major Facilitator Superfamily NZD89_29125 PF08240 Alcohol dehydrogenase GroES-like domain NZD89_29125 PF00107 Zinc-binding dehydrogenase NZD89_29135 PF13610 DDE domain NZD89_29160 PF02371 Transposase IS116/IS110/IS902 family NZD89_29160 PF01548 Transposase NZD89_29170 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NZD89_29190 PF02195 ParB-like nuclease domain NZD89_29190 PF18090 Centromere-binding protein HTH domain NZD89_29195 PF13614 AAA domain NZD89_29200 PF01051 Initiator Replication protein NZD89_29215 PF00302 Chloramphenicol acetyltransferase