locus-tag	class	description
NZD89_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NZD89_00010	COG0592	DNA-directed DNA polymerase activity
NZD89_00015	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NZD89_00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NZD89_00025	COG0187	DNA topoisomerase II activity
NZD89_00030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NZD89_00050	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
NZD89_00065	COG0516	GMP reductase activity
NZD89_00065	COG0517	IMP dehydrogenase activity
NZD89_00070	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
NZD89_00075	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
NZD89_00130	COG1484	DNA-dependent DNA replication
NZD89_00175	COG0204	Acyl-transferase
NZD89_00180	COG1597	lipid kinase activity
NZD89_00185	COG0438	transferase activity, transferring glycosyl groups
NZD89_00230	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_00255	COG0697	spore germination
NZD89_00305	COG4974	Belongs to the 'phage' integrase family
NZD89_00335	COG1309	transcriptional regulator
NZD89_00340	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NZD89_00350	COG1960	acyl-CoA dehydrogenase activity
NZD89_00360	COG2030	dehydratase
NZD89_00380	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_00390	COG2271	Major facilitator Superfamily
NZD89_00410	COG0582	viral genome integration into host DNA
NZD89_00475	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NZD89_00485	COG1971	Probably functions as a manganese efflux pump
NZD89_00495	COG0457	Tetratricopeptide repeat
NZD89_00495	COG0463	Glycosyl transferase, family 2
NZD89_00535	COG0697	spore germination
NZD89_00545	COG4948	Mandelate Racemase Muconate Lactonizing
NZD89_00555	COG2271	Major facilitator Superfamily
NZD89_00560	COG3483	tryptophan 2,3-dioxygenase activity
NZD89_00565	COG3844	kynureninase activity
NZD89_00570	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
NZD89_00575	COG4191	Histidine kinase
NZD89_00580	COG0326	Molecular chaperone. Has ATPase activity
NZD89_00590	COG3867	Arabinogalactan endo-beta-1,4-galactanase
NZD89_00605	COG1175	transmembrane transport
NZD89_00610	COG3833	ABC-type maltose transport systems, permease component
NZD89_00615	COG1874	Beta-galactosidase
NZD89_00655	COG2076	Multidrug Resistance protein
NZD89_00660	COG1175	transmembrane transport
NZD89_00665	COG0584	glycerophosphoryl diester phosphodiesterase
NZD89_00675	COG2814	Major facilitator Superfamily
NZD89_00680	COG1606	tRNA processing
NZD89_00685	COG1691	(AIR) carboxylase
NZD89_00720	COG1609	Transcriptional regulator
NZD89_00730	COG1175	transmembrane transport
NZD89_00740	COG0395	ABC-type sugar transport system, permease component
NZD89_00745	COG1486	melibiose metabolic process
NZD89_00750	COG1486	melibiose metabolic process
NZD89_00755	COG2508	Transcriptional regulator
NZD89_00790	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NZD89_00795	COG2190	(PTS) system
NZD89_00800	COG1263	PTS System
NZD89_00800	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NZD89_00805	COG0366	Alpha amylase catalytic
NZD89_00810	COG2188	Transcriptional regulator
NZD89_00825	COG0673	inositol 2-dehydrogenase activity
NZD89_00830	COG2971	BadF BadG BcrA BcrD
NZD89_00840	COG1414	Transcriptional regulator
NZD89_00855	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
NZD89_00860	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
NZD89_00865	COG1984	allophanate hydrolase subunit 2
NZD89_00870	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
NZD89_00910	COG0004	ammonium transporteR
NZD89_00915	COG0174	glutamine synthetase
NZD89_00930	COG5002	protein histidine kinase activity
NZD89_00940	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NZD89_00950	COG0477	Major facilitator Superfamily
NZD89_00965	COG5002	protein histidine kinase activity
NZD89_00970	COG0747	negative chemotaxis
NZD89_01015	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
NZD89_01025	COG4585	Histidine kinase
NZD89_01040	COG4191	Histidine kinase
NZD89_01045	COG0791	NLP P60 protein
NZD89_01045	COG1388	LysM domain
NZD89_01045	COG3103	Sh3 type 3 domain protein
NZD89_01065	COG3579	cysteine-type endopeptidase activity
NZD89_01070	COG1435	thymidine kinase activity
NZD89_01085	COG1940	carbohydrate kinase activity
NZD89_01090	COG4213	ABC transporter substrate-binding protein
NZD89_01100	COG4214	carbohydrate transport
NZD89_01105	COG2309	aminopeptidase activity
NZD89_01110	COG0488	(ABC) transporter
NZD89_01125	COG1309	transcriptional regulator
NZD89_01130	COG1511	domain protein
NZD89_01140	COG3973	AAA domain
NZD89_01150	COG0420	3'-5' exonuclease activity
NZD89_01165	COG1940	carbohydrate kinase activity
NZD89_01220	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
NZD89_01225	COG1850	ribulose-bisphosphate carboxylase activity
NZD89_01230	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
NZD89_01235	COG0235	Class ii aldolase
NZD89_01240	COG0367	asparagine synthase
NZD89_01275	COG3852	Histidine kinase
NZD89_01280	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NZD89_01285	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
NZD89_01290	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NZD89_01305	COG2244	polysaccharide biosynthetic process
NZD89_01315	COG1982	Orn Lys Arg decarboxylase major
NZD89_01320	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NZD89_01325	COG3870	Protein conserved in bacteria
NZD89_01335	COG1774	PSP1 C-terminal conserved region
NZD89_01340	COG4467	Involved in initiation control of chromosome replication
NZD89_01345	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NZD89_01350	COG2002	toxin-antitoxin pair type II binding
NZD89_01355	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NZD89_01355	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NZD89_01360	COG0084	hydrolase, TatD family'
NZD89_01365	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
NZD89_01370	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NZD89_01390	COG4466	Protein conserved in bacteria
NZD89_01405	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NZD89_01405	COG0189	ligase activity
NZD89_01415	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NZD89_01420	COG0251	oxidation-reduction process
NZD89_01425	COG2088	sporulation resulting in formation of a cellular spore
NZD89_01440	COG0193	aminoacyl-tRNA hydrolase activity
NZD89_01450	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NZD89_01455	COG2002	toxin-antitoxin pair type II binding
NZD89_01460	COG2244	polysaccharide biosynthetic process
NZD89_01465	COG3956	TIGRFAM MazG family protein
NZD89_01475	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
NZD89_01495	COG1098	S1 RNA binding domain
NZD89_01515	COG2131	deaminase
NZD89_01520	COG2208	phosphoserine phosphatase activity
NZD89_01525	COG2304	oxidoreductase activity
NZD89_01535	COG0037	tRNA processing
NZD89_01540	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
NZD89_01545	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NZD89_01555	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
NZD89_01560	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NZD89_01565	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NZD89_01570	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NZD89_01575	COG1396	sequence-specific DNA binding
NZD89_01580	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NZD89_01585	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
NZD89_01630	COG1309	transcriptional regulator
NZD89_01640	COG3880	PFAM UvrB UvrC protein
NZD89_01645	COG3869	Catalyzes the specific phosphorylation of arginine residues in
NZD89_01650	COG0542	response to heat
NZD89_01655	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NZD89_01660	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
NZD89_01665	COG1183	phosphatidylcholine synthase activity
NZD89_01670	COG4956	integral membrane protein (PIN domain superfamily)
NZD89_01675	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
NZD89_01680	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
NZD89_01685	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NZD89_01690	COG0215	cysteine-tRNA ligase activity
NZD89_01715	COG0267	Belongs to the bacterial ribosomal protein bL33 family
NZD89_01725	COG0250	Participates in transcription elongation, termination and antitermination
NZD89_01735	COG0081	regulation of translation
NZD89_01740	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NZD89_01745	COG0222	ribosome binding
NZD89_01750	COG2813	Specifically methylates the guanine in position
NZD89_01755	COG0085	RNA polymerase activity
NZD89_01760	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NZD89_01765	COG1358	cellular component organization or biogenesis
NZD89_01770	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NZD89_01775	COG0049	tRNA binding
NZD89_01780	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NZD89_01790	COG0051	transcription antitermination factor activity, RNA binding
NZD89_01795	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NZD89_01800	COG0088	Forms part of the polypeptide exit tunnel
NZD89_01810	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NZD89_01815	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NZD89_01820	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NZD89_01825	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NZD89_01830	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NZD89_01835	COG0255	Belongs to the universal ribosomal protein uL29 family
NZD89_01840	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NZD89_01845	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NZD89_01855	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NZD89_01860	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NZD89_01865	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NZD89_01870	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NZD89_01875	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NZD89_01880	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NZD89_01890	COG0200	Binds to the 23S rRNA
NZD89_01895	COG0201	protein transport
NZD89_01900	COG0563	adenylate kinase activity
NZD89_01910	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NZD89_01915	COG0257	Belongs to the bacterial ribosomal protein bL36 family
NZD89_01920	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NZD89_01925	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NZD89_01930	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NZD89_01935	COG0202	RNA polymerase activity
NZD89_01940	COG0203	ribosomal protein L17
NZD89_01945	COG0101	tRNA pseudouridine synthase activity
NZD89_01950	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NZD89_01955	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
NZD89_01970	COG0489	protein tyrosine kinase activity
NZD89_02000	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
NZD89_02010	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NZD89_02015	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NZD89_02025	COG0640	Transcriptional regulator
NZD89_02050	COG1131	(ABC) transporter
NZD89_02060	COG1695	Transcriptional regulator
NZD89_02100	COG1595	DNA-templated transcription, initiation
NZD89_02140	COG1695	Transcriptional regulator
NZD89_02200	COG0681	Belongs to the peptidase S26 family
NZD89_02230	COG1695	Transcriptional regulator
NZD89_02245	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NZD89_02265	COG1396	sequence-specific DNA binding
NZD89_02280	COG1279	arginine transmembrane transporter activity
NZD89_02285	COG0583	DNA-binding transcription factor activity
NZD89_02290	COG2211	Major facilitator Superfamily
NZD89_02295	COG1247	-acetyltransferase
NZD89_02300	COG0706	membrane insertase activity
NZD89_02310	COG1695	Transcriptional regulator
NZD89_02330	COG0456	acetyltransferase
NZD89_02330	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NZD89_02375	COG0456	acetyltransferase
NZD89_02380	COG0456	acetyltransferase
NZD89_02380	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NZD89_02390	COG0456	acetyltransferase
NZD89_02400	COG0346	lactoylglutathione lyase activity
NZD89_02405	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NZD89_02415	COG0697	spore germination
NZD89_02525	COG0398	Pfam SNARE associated Golgi protein
NZD89_02535	COG1937	Protein conserved in bacteria
NZD89_02540	COG2217	Heavy metal translocating P-type atpase
NZD89_02600	COG0833	amino acid
NZD89_02605	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
NZD89_02610	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
NZD89_02665	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NZD89_02670	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NZD89_02685	COG1733	regulation of RNA biosynthetic process
NZD89_02690	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_02720	COG4221	oxidoreductase activity
NZD89_02730	COG2210	Belongs to the sulfur carrier protein TusA family
NZD89_02735	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NZD89_02735	COG0425	Belongs to the sulfur carrier protein TusA family
NZD89_02740	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NZD89_02740	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NZD89_02750	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NZD89_02755	COG1937	Protein conserved in bacteria
NZD89_02785	COG2194	sulfuric ester hydrolase activity
NZD89_02815	COG2515	1-aminocyclopropane-1-carboxylate deaminase
NZD89_02820	COG0747	negative chemotaxis
NZD89_02830	COG0747	negative chemotaxis
NZD89_02835	COG0667	Aldo Keto reductase
NZD89_02840	COG3344	reverse transcriptase
NZD89_02885	COG3848	Pyruvate phosphate dikinase
NZD89_02885	COG0574	Belongs to the PEP-utilizing enzyme family
NZD89_02915	COG2814	Major facilitator Superfamily
NZD89_02920	COG0393	Putative heavy-metal-binding
NZD89_02930	COG1914	H( )-stimulated, divalent metal cation uptake system
NZD89_02935	COG1914	H( )-stimulated, divalent metal cation uptake system
NZD89_02950	COG1285	pathogenesis
NZD89_02990	COG1131	(ABC) transporter
NZD89_02995	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
NZD89_03005	COG1349	DNA-binding transcription factor activity
NZD89_03030	COG1971	Probably functions as a manganese efflux pump
NZD89_03040	COG0745	RESPONSE REGULATOR receiver
NZD89_03045	COG5002	protein histidine kinase activity
NZD89_03045	COG3850	Histidine kinase
NZD89_03055	COG0747	negative chemotaxis
NZD89_03085	COG1285	pathogenesis
NZD89_03100	COG1914	H( )-stimulated, divalent metal cation uptake system
NZD89_03105	COG1914	H( )-stimulated, divalent metal cation uptake system
NZD89_03115	COG0393	Putative heavy-metal-binding
NZD89_03120	COG2814	Major facilitator Superfamily
NZD89_03155	COG3848	Pyruvate phosphate dikinase
NZD89_03155	COG0574	Belongs to the PEP-utilizing enzyme family
NZD89_03165	COG1280	lysine exporter protein (LysE YggA)
NZD89_03170	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
NZD89_03175	COG2271	Major facilitator Superfamily
NZD89_03285	COG1175	transmembrane transport
NZD89_03290	COG0395	ABC-type sugar transport system, permease component
NZD89_03295	COG4948	Mandelate Racemase Muconate Lactonizing
NZD89_03300	COG0673	inositol 2-dehydrogenase activity
NZD89_03310	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_03325	COG0735	belongs to the Fur family
NZD89_03330	COG0450	alkyl hydroperoxide reductase
NZD89_03340	COG3385	transposase activity
NZD89_03345	COG1289	transmembrane transporter activity
NZD89_03375	COG1175	transmembrane transport
NZD89_03380	COG0395	ABC-type sugar transport system, permease component
NZD89_03390	COG1012	belongs to the aldehyde dehydrogenase family
NZD89_03400	COG2186	Transcriptional regulator
NZD89_03420	COG3386	PFAM SMP-30 Gluconolaconase
NZD89_03425	COG1312	Catalyzes the dehydration of D-mannonate
NZD89_03430	COG1802	Transcriptional regulator
NZD89_03435	COG0697	spore germination
NZD89_03440	COG0531	amino acid
NZD89_03445	COG0697	spore germination
NZD89_03470	COG0583	DNA-binding transcription factor activity
NZD89_03475	COG2226	methyltransferase
NZD89_03490	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NZD89_03505	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
NZD89_03510	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
NZD89_03515	COG1733	regulation of RNA biosynthetic process
NZD89_03535	COG2720	vancomycin resistance protein
NZD89_03540	COG0745	RESPONSE REGULATOR receiver
NZD89_03545	COG5002	protein histidine kinase activity
NZD89_03550	COG5002	protein histidine kinase activity
NZD89_03555	COG0561	phosphatase activity
NZD89_03560	COG2213	PTS system mannitol-specific
NZD89_03565	COG3711	transcriptional antiterminator
NZD89_03565	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NZD89_03580	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NZD89_03735	COG3942	CHAP domain
NZD89_03735	COG1388	LysM domain
NZD89_03745	COG1227	inorganic diphosphatase activity
NZD89_03770	COG4895	conserved protein (DUF2196)
NZD89_03775	COG0488	(ABC) transporter
NZD89_03785	COG0395	ABC-type sugar transport system, permease component
NZD89_03790	COG1793	dna ligase
NZD89_03800	COG0400	carboxylic ester hydrolase activity
NZD89_03805	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NZD89_03810	COG2814	Major facilitator Superfamily
NZD89_03820	COG1809	phosphosulfolactate synthase activity
NZD89_03840	COG0318	PFAM AMP-dependent synthetase and ligase
NZD89_03855	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NZD89_03860	COG2188	Transcriptional regulator
NZD89_03865	COG1113	amino acid transport
NZD89_03885	COG0833	amino acid
NZD89_03890	COG1392	Phosphate transport regulator
NZD89_03895	COG0306	phosphate transporter
NZD89_03900	COG1609	Transcriptional regulator
NZD89_03905	COG2723	6-phospho-beta-galactosidase activity
NZD89_03910	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NZD89_03930	COG2258	MOSC domain
NZD89_03935	COG1187	pseudouridine synthase activity
NZD89_03940	COG2226	methyltransferase
NZD89_03950	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
NZD89_03955	COG0384	phenazine biosynthesis protein PhzF
NZD89_04030	COG3663	DNA glycosylase
NZD89_04045	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NZD89_04050	COG0521	Mo-molybdopterin cofactor biosynthetic process
NZD89_04070	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NZD89_04090	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NZD89_04110	COG0745	RESPONSE REGULATOR receiver
NZD89_04115	COG5002	protein histidine kinase activity
NZD89_04120	COG1040	competence protein
NZD89_04130	COG1191	sigma factor activity
NZD89_04140	COG2226	methyltransferase
NZD89_04145	COG1191	sigma factor activity
NZD89_04180	COG0463	Glycosyl transferase, family 2
NZD89_04180	COG0457	Tetratricopeptide repeat
NZD89_04200	COG0653	protein targeting
NZD89_04215	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NZD89_04250	COG0840	transmembrane signaling receptor activity
NZD89_04250	COG3290	protein histidine kinase activity
NZD89_04285	COG1914	H( )-stimulated, divalent metal cation uptake system
NZD89_04315	COG1914	H( )-stimulated, divalent metal cation uptake system
NZD89_04335	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
NZD89_04350	COG0640	Transcriptional regulator
NZD89_04360	COG0747	negative chemotaxis
NZD89_04365	COG0840	transmembrane signaling receptor activity
NZD89_04375	COG0762	integral membrane protein
NZD89_04410	COG0673	inositol 2-dehydrogenase activity
NZD89_04415	COG1082	Xylose isomerase domain protein TIM barrel
NZD89_04420	COG1082	Xylose isomerase domain protein TIM barrel
NZD89_04420	COG3185	4-Hydroxyphenylpyruvate dioxygenase
NZD89_04425	COG0673	inositol 2-dehydrogenase activity
NZD89_04430	COG2814	Major facilitator Superfamily
NZD89_04435	COG1609	Transcriptional regulator
NZD89_04440	COG1309	transcriptional regulator
NZD89_04450	COG1657	PFAM Prenyltransferase squalene oxidase
NZD89_04475	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
NZD89_04490	COG2814	Major facilitator Superfamily
NZD89_04495	COG1846	Transcriptional regulator
NZD89_04505	COG1012	belongs to the aldehyde dehydrogenase family
NZD89_04510	COG1902	pentaerythritol trinitrate reductase activity
NZD89_04515	COG0697	spore germination
NZD89_04520	COG1574	metal-dependent hydrolase with the TIM-barrel fold
NZD89_04525	COG5002	protein histidine kinase activity
NZD89_04545	COG3118	belongs to the thioredoxin family
NZD89_04550	COG0583	DNA-binding transcription factor activity
NZD89_04555	COG0514	ATP-dependent DNA helicase (RecQ)
NZD89_04570	COG1971	Probably functions as a manganese efflux pump
NZD89_04590	COG5002	protein histidine kinase activity
NZD89_04625	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
NZD89_04630	COG2068	MobA-Related Protein
NZD89_04635	COG2814	Major facilitator Superfamily
NZD89_04645	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NZD89_04650	COG1304	FMN binding
NZD89_04665	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NZD89_04670	COG1657	PFAM Prenyltransferase squalene oxidase
NZD89_04675	COG1562	ergosterol biosynthetic process
NZD89_04685	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
NZD89_04695	COG0477	Major facilitator Superfamily
NZD89_04700	COG1216	Glycosyl transferase, family 2
NZD89_04705	COG0339	signal peptide processing
NZD89_04715	COG1164	Oligoendopeptidase f
NZD89_04725	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NZD89_04755	COG1376	ErfK ybiS ycfS ynhG family protein
NZD89_04765	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NZD89_04770	COG1566	PFAM secretion protein HlyD family protein
NZD89_04775	COG2814	Major facilitator Superfamily
NZD89_04780	COG0655	NAD(P)H dehydrogenase (quinone) activity
NZD89_04790	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NZD89_04790	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NZD89_04795	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NZD89_04795	COG1648	precorrin-2 dehydrogenase activity
NZD89_04800	COG0175	sulfate reduction
NZD89_04805	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NZD89_04810	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NZD89_04810	COG1587	Uroporphyrinogen-III synthase
NZD89_04820	COG4841	protein insertion into membrane
NZD89_04830	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NZD89_04830	COG0456	acetyltransferase
NZD89_04835	COG0788	formyltetrahydrofolate deformylase activity
NZD89_04850	COG0667	Aldo Keto reductase
NZD89_04855	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
NZD89_04865	COG1418	mRNA catabolic process
NZD89_04880	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_04895	COG1657	PFAM Prenyltransferase squalene oxidase
NZD89_04905	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NZD89_04915	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
NZD89_04925	COG0318	PFAM AMP-dependent synthetase and ligase
NZD89_04930	COG1902	pentaerythritol trinitrate reductase activity
NZD89_04930	COG0446	pyridine nucleotide-disulphide oxidoreductase
NZD89_04940	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NZD89_04955	COG1063	alcohol dehydrogenase
NZD89_04965	COG0517	IMP dehydrogenase activity
NZD89_04965	COG1125	glycine betaine transport
NZD89_04990	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NZD89_05005	COG0582	viral genome integration into host DNA
NZD89_05030	COG1396	sequence-specific DNA binding
NZD89_05035	COG1476	TRANSCRIPTIONal
NZD89_05085	COG3617	BRO family, N-terminal domain
NZD89_05115	COG5484	DNA packaging
NZD89_05125	COG1278	Cold shock
NZD89_05130	COG3239	Fatty acid desaturase
NZD89_05160	COG4626	Terminase
NZD89_05160	COG1802	Transcriptional regulator
NZD89_05165	COG4695	Portal protein
NZD89_05170	COG0740	serine-type endopeptidase activity
NZD89_05305	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_05365	COG4496	protein, YerC YecD
NZD89_05380	COG1045	serine acetyltransferase
NZD89_05385	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NZD89_05385	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NZD89_05395	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NZD89_05395	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NZD89_05410	COG2827	Endonuclease containing a URI domain
NZD89_05435	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NZD89_05445	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
NZD89_05455	COG2346	COG2346, Truncated hemoglobins
NZD89_05460	COG3679	Belongs to the UPF0342 family
NZD89_05465	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NZD89_05480	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NZD89_05485	COG1438	arginine binding
NZD89_05490	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NZD89_05510	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NZD89_05515	COG4109	DRTGG domain
NZD89_05520	COG0587	DNA-directed DNA polymerase activity
NZD89_05525	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
NZD89_05535	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
NZD89_05540	COG0825	malonyl-CoA metabolic process
NZD89_05545	COG0469	pyruvate kinase activity
NZD89_05555	COG0180	Tryptophanyl-tRNA synthetase
NZD89_05560	COG0745	RESPONSE REGULATOR receiver
NZD89_05570	COG0538	isocitrate dehydrogenase activity
NZD89_05575	COG0039	L-malate dehydrogenase activity
NZD89_05585	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
NZD89_05590	COG0237	dephospho-CoA kinase activity
NZD89_05620	COG0590	tRNA wobble adenosine to inosine editing
NZD89_05630	COG2323	membrane
NZD89_05660	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
NZD89_05665	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
NZD89_05675	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_05685	COG1271	oxidase subunit
NZD89_05690	COG1294	oxidase, subunit
NZD89_05695	COG4846	Membrane protein involved in cytochrome C biogenesis
NZD89_05725	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
NZD89_05730	COG4988	ABC transporter
NZD89_05735	COG1294	oxidase, subunit
NZD89_05740	COG1271	oxidase subunit
NZD89_05750	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NZD89_05755	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NZD89_05760	COG1982	Orn Lys Arg decarboxylase major
NZD89_05765	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NZD89_05775	COG0768	penicillin binding
NZD89_05780	COG2188	Transcriptional regulator
NZD89_05785	COG4948	Mandelate Racemase Muconate Lactonizing
NZD89_05805	COG1335	isochorismatase
NZD89_05815	COG2814	Major facilitator Superfamily
NZD89_05820	COG1414	Transcriptional regulator
NZD89_05830	COG0531	amino acid
NZD89_05835	COG0745	RESPONSE REGULATOR receiver
NZD89_05840	COG5002	protein histidine kinase activity
NZD89_05850	COG1940	carbohydrate kinase activity
NZD89_05855	COG2115	Belongs to the xylose isomerase family
NZD89_05860	COG1063	alcohol dehydrogenase
NZD89_05870	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_05905	COG1175	transmembrane transport
NZD89_05910	COG3833	ABC-type maltose transport systems, permease component
NZD89_05935	COG1388	LysM domain
NZD89_05935	COG1705	Flagellar rod assembly protein muramidase FlgJ
NZD89_05960	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NZD89_05970	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_05985	COG4974	Belongs to the 'phage' integrase family
NZD89_05990	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_06060	COG2226	methyltransferase
NZD89_06065	COG2814	Major facilitator Superfamily
NZD89_06095	COG3961	Belongs to the TPP enzyme family
NZD89_06150	COG1278	Cold shock
NZD89_06170	COG0776	regulation of translation
NZD89_06175	COG1278	Cold shock
NZD89_06180	COG0768	penicillin binding
NZD89_06190	COG2070	2-Nitropropane dioxygenase
NZD89_06225	COG1253	flavin adenine dinucleotide binding
NZD89_06230	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NZD89_06255	COG1472	Belongs to the glycosyl hydrolase 3 family
NZD89_06270	COG0673	inositol 2-dehydrogenase activity
NZD89_06280	COG3250	beta-galactosidase activity
NZD89_06295	COG1228	amidohydrolase
NZD89_06315	COG1609	Transcriptional regulator
NZD89_06325	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
NZD89_06335	COG1175	transmembrane transport
NZD89_06340	COG0395	ABC-type sugar transport system, permease component
NZD89_06350	COG1082	Xylose isomerase domain protein TIM barrel
NZD89_06360	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_06370	COG2971	BadF BadG BcrA BcrD
NZD89_06380	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
NZD89_06385	COG3876	Protein conserved in bacteria
NZD89_06390	COG1737	Transcriptional regulator
NZD89_06395	COG1175	transmembrane transport
NZD89_06405	COG2182	Extracellular solute-binding protein
NZD89_06415	COG0277	FAD linked oxidase domain protein
NZD89_06420	COG0247	lactate metabolic process
NZD89_06460	COG1175	transmembrane transport
NZD89_06465	COG0395	ABC-type sugar transport system, permease component
NZD89_06480	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
NZD89_06485	COG1482	cell wall glycoprotein biosynthetic process
NZD89_06505	COG0477	Major facilitator Superfamily
NZD89_06520	COG0579	oxidoreductase
NZD89_06525	COG2188	Transcriptional regulator
NZD89_06530	COG1486	melibiose metabolic process
NZD89_06545	COG1012	belongs to the aldehyde dehydrogenase family
NZD89_06560	COG0477	Major facilitator Superfamily
NZD89_06575	COG2814	Major facilitator Superfamily
NZD89_06595	COG4948	Mandelate Racemase Muconate Lactonizing
NZD89_06605	COG0583	DNA-binding transcription factor activity
NZD89_06610	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NZD89_06615	COG0583	DNA-binding transcription factor activity
NZD89_06625	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NZD89_06625	COG0473	3-isopropylmalate dehydrogenase activity
NZD89_06630	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NZD89_06660	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_06690	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_06705	COG0058	SHG alpha-glucan phosphorylase activity
NZD89_06725	COG1543	Belongs to the glycosyl hydrolase 57 family
NZD89_06730	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NZD89_06740	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NZD89_06750	COG2508	Transcriptional regulator
NZD89_06755	COG2814	Major facilitator Superfamily
NZD89_06760	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NZD89_06765	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
NZD89_06770	COG0543	2 iron, 2 sulfur cluster binding
NZD89_06775	COG0167	dihydroorotate dehydrogenase activity
NZD89_06790	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_06825	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
NZD89_06850	COG1653	transport
NZD89_06855	COG1175	transmembrane transport
NZD89_06860	COG0395	ABC-type sugar transport system, permease component
NZD89_06885	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NZD89_06890	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
NZD89_06905	COG1309	transcriptional regulator
NZD89_06910	COG3119	arylsulfatase activity
NZD89_06915	COG1262	PFAM Formylglycine-generating sulfatase enzyme
NZD89_06920	COG2211	Major facilitator Superfamily
NZD89_06925	COG3119	arylsulfatase activity
NZD89_06965	COG2340	Cysteine-rich secretory protein family
NZD89_06970	COG5001	Diguanylate cyclase
NZD89_06970	COG3300	MHYT domain
NZD89_06980	COG0640	Transcriptional regulator
NZD89_06990	COG1819	glycosyl
NZD89_07010	COG0395	ABC-type sugar transport system, permease component
NZD89_07015	COG4977	sequence-specific DNA binding
NZD89_07020	COG5285	phytanoyl-CoA dioxygenase
NZD89_07035	COG0187	DNA topoisomerase II activity
NZD89_07040	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NZD89_07045	COG0129	dihydroxy-acid dehydratase activity
NZD89_07050	COG2186	Transcriptional regulator
NZD89_07060	COG1012	belongs to the aldehyde dehydrogenase family
NZD89_07065	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NZD89_07105	COG3833	ABC-type maltose transport systems, permease component
NZD89_07110	COG2971	BadF BadG BcrA BcrD
NZD89_07115	COG1486	melibiose metabolic process
NZD89_07145	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_07150	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NZD89_07160	COG1063	alcohol dehydrogenase
NZD89_07165	COG0583	DNA-binding transcription factor activity
NZD89_07175	COG0477	Major facilitator Superfamily
NZD89_07190	COG0179	Fumarylacetoacetate (FAA) hydrolase
NZD89_07200	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NZD89_07210	COG2271	Major facilitator Superfamily
NZD89_07215	COG0235	Class ii aldolase
NZD89_07220	COG2814	Major facilitator Superfamily
NZD89_07235	COG4638	Rieske (2fe-2S)
NZD89_07245	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NZD89_07250	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NZD89_07255	COG2271	Major facilitator Superfamily
NZD89_07260	COG4977	sequence-specific DNA binding
NZD89_07265	COG0673	inositol 2-dehydrogenase activity
NZD89_07280	COG1929	Belongs to the glycerate kinase type-1 family
NZD89_07295	COG0473	3-isopropylmalate dehydrogenase activity
NZD89_07315	COG2160	L-arabinose isomerase activity
NZD89_07335	COG0371	Dehydrogenase
NZD89_07350	COG2814	Major facilitator Superfamily
NZD89_07355	COG1802	Transcriptional regulator
NZD89_07360	COG0747	negative chemotaxis
NZD89_07370	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NZD89_07375	COG3619	membrane
NZD89_07380	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NZD89_07385	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NZD89_07420	COG1132	(ABC) transporter
NZD89_07425	COG1132	(ABC) transporter
NZD89_07430	COG1072	(Pantothenic acid kinase))
NZD89_07435	COG2390	Transcriptional regulator
NZD89_07445	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NZD89_07450	COG0583	DNA-binding transcription factor activity
NZD89_07455	COG0745	RESPONSE REGULATOR receiver
NZD89_07465	COG0095	Lipoate-protein ligase
NZD89_07470	COG5002	protein histidine kinase activity
NZD89_07475	COG0745	RESPONSE REGULATOR receiver
NZD89_07480	COG2814	Major facilitator Superfamily
NZD89_07485	COG0444	Belongs to the ABC transporter superfamily
NZD89_07490	COG4608	Belongs to the ABC transporter superfamily
NZD89_07495	COG4166	transmembrane transport
NZD89_07500	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NZD89_07505	COG0601	transmembrane transport
NZD89_07510	COG0288	reversible hydration of carbon dioxide
NZD89_07520	COG2814	Major facilitator Superfamily
NZD89_07530	COG1757	Na H antiporter
NZD89_07535	COG1132	(ABC) transporter
NZD89_07540	COG1132	(ABC) transporter
NZD89_07555	COG1388	LysM domain
NZD89_07555	COG3858	chitin binding
NZD89_07575	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
NZD89_07580	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
NZD89_07585	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
NZD89_07590	COG2205	protein histidine kinase activity
NZD89_07595	COG2205	protein histidine kinase activity
NZD89_07600	COG2205	protein histidine kinase activity
NZD89_07605	COG0745	RESPONSE REGULATOR receiver
NZD89_07610	COG0531	amino acid
NZD89_07715	COG0352	thiamine-phosphate diphosphorylase activity
NZD89_07715	COG0351	phosphomethylpyrimidine kinase
NZD89_07720	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
NZD89_07725	COG0352	thiamine-phosphate diphosphorylase activity
NZD89_07745	COG1959	2 iron, 2 sulfur cluster binding
NZD89_07755	COG1607	acyl-coa hydrolase
NZD89_07760	COG0460	homoserine dehydrogenase
NZD89_07765	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
NZD89_07770	COG0129	dihydroxy-acid dehydratase activity
NZD89_07775	COG0028	Belongs to the TPP enzyme family
NZD89_07780	COG0440	acetolactate synthase activity
NZD89_07785	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NZD89_07790	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NZD89_07795	COG0473	3-isopropylmalate dehydrogenase activity
NZD89_07800	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NZD89_07805	COG0066	3-isopropylmalate dehydratase activity
NZD89_07810	COG0285	dihydrofolate synthase activity
NZD89_07815	COG1971	Probably functions as a manganese efflux pump
NZD89_07820	COG0372	Belongs to the citrate synthase family
NZD89_07835	COG0517	IMP dehydrogenase activity
NZD89_07855	COG1136	(ABC) transporter
NZD89_07860	COG0577	efflux transmembrane transporter activity
NZD89_07865	COG0501	Belongs to the peptidase M48B family
NZD89_07875	COG0438	transferase activity, transferring glycosyl groups
NZD89_07885	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
NZD89_07940	COG2267	carboxylic ester hydrolase activity
NZD89_07945	COG2814	Major facilitator Superfamily
NZD89_07980	COG0517	IMP dehydrogenase activity
NZD89_07985	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
NZD89_07990	COG0574	Belongs to the PEP-utilizing enzyme family
NZD89_07990	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NZD89_08020	COG3069	C4-dicarboxylate transmembrane transporter activity
NZD89_08025	COG2151	metal-sulfur cluster biosynthetic enzyme
NZD89_08035	COG1832	CoA-binding protein
NZD89_08045	COG0477	Major facilitator Superfamily
NZD89_08065	COG1278	Cold shock
NZD89_08105	COG0095	Lipoate-protein ligase
NZD89_08110	COG1247	-acetyltransferase
NZD89_08130	COG1278	Cold shock
NZD89_08150	COG0840	transmembrane signaling receptor activity
NZD89_08180	COG1289	transmembrane transporter activity
NZD89_08195	COG1607	acyl-coa hydrolase
NZD89_08240	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NZD89_08260	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
NZD89_08265	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NZD89_08275	COG0657	acetylesterase activity
NZD89_08315	COG2318	DinB family
NZD89_08345	COG0477	Major facilitator Superfamily
NZD89_08365	COG1175	transmembrane transport
NZD89_08370	COG0395	ABC-type sugar transport system, permease component
NZD89_08395	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_08405	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_08410	COG0531	amino acid
NZD89_08440	COG1674	ftsk spoiiie
NZD89_08440	COG1196	nuclear chromosome segregation
NZD89_08455	COG0346	lactoylglutathione lyase activity
NZD89_08460	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
NZD89_08465	COG4208	sulfate ABC transporter
NZD89_08470	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
NZD89_08475	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
NZD89_08485	COG1454	alcohol dehydrogenase
NZD89_08495	COG3829	transcription factor binding
NZD89_08495	COG3290	protein histidine kinase activity
NZD89_08505	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_08510	COG2188	Transcriptional regulator
NZD89_08515	COG2271	Major facilitator Superfamily
NZD89_08520	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_08525	COG2207	Transcriptional regulator
NZD89_08605	COG1175	transmembrane transport
NZD89_08610	COG0395	ABC-type sugar transport system, permease component
NZD89_08630	COG0531	amino acid
NZD89_08635	COG0671	phosphoesterase, PA-phosphatase related
NZD89_08640	COG0730	response to heat
NZD89_08655	COG1388	LysM domain
NZD89_08655	COG3942	CHAP domain
NZD89_08720	COG0436	Aminotransferase
NZD89_08735	COG1937	Protein conserved in bacteria
NZD89_08740	COG2217	Heavy metal translocating P-type atpase
NZD89_08745	COG2197	response regulator
NZD89_08750	COG4585	Histidine kinase
NZD89_08755	COG1120	ATPase activity
NZD89_08760	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NZD89_08765	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NZD89_08770	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
NZD89_08775	COG0667	Aldo Keto reductase
NZD89_08780	COG0697	spore germination
NZD89_08815	COG1108	ABC-type Mn2 Zn2 transport systems permease components
NZD89_08820	COG1108	ABC-type Mn2 Zn2 transport systems permease components
NZD89_08825	COG1121	(ABC) transporter
NZD89_08845	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NZD89_08850	COG0523	cobalamin synthesis protein
NZD89_08855	COG0523	cobalamin synthesis protein
NZD89_08880	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NZD89_08885	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NZD89_09030	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
NZD89_09035	COG2271	Major facilitator Superfamily
NZD89_09055	COG0776	regulation of translation
NZD89_09075	COG1335	isochorismatase
NZD89_09100	COG1278	Cold shock
NZD89_09105	COG3239	Fatty acid desaturase
NZD89_09140	COG0582	viral genome integration into host DNA
NZD89_09155	COG3620	sequence-specific DNA binding
NZD89_09170	COG3645	SOS response
NZD89_09170	COG3646	Phage regulatory protein
NZD89_09215	COG1484	DNA-dependent DNA replication
NZD89_09265	COG5484	DNA packaging
NZD89_09355	COG3299	homolog of phage Mu protein gp47
NZD89_09470	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NZD89_09475	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NZD89_09480	COG0291	Belongs to the bacterial ribosomal protein bL35 family
NZD89_09485	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NZD89_09490	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NZD89_09500	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
NZD89_09515	COG3546	catalase activity
NZD89_09525	COG1082	Xylose isomerase domain protein TIM barrel
NZD89_09525	COG3185	4-Hydroxyphenylpyruvate dioxygenase
NZD89_09535	COG1082	Xylose isomerase domain protein TIM barrel
NZD89_09540	COG0673	inositol 2-dehydrogenase activity
NZD89_09545	COG0673	inositol 2-dehydrogenase activity
NZD89_09565	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NZD89_09570	COG1482	cell wall glycoprotein biosynthetic process
NZD89_09585	COG0714	Associated with various cellular activities
NZD89_09595	COG0567	Dehydrogenase, E1 component
NZD89_09600	COG0508	dehydrogenase complex catalyzes the overall conversion of
NZD89_09605	COG0584	glycerophosphoryl diester phosphodiesterase
NZD89_09620	COG3835	regulator
NZD89_09625	COG3842	ATPase activity
NZD89_09630	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NZD89_09635	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
NZD89_09640	COG0205	6-phosphofructokinase activity
NZD89_09645	COG1830	Aldolase
NZD89_09650	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NZD89_09655	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NZD89_09670	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NZD89_09675	COG0072	phenylalanine-tRNA ligase activity
NZD89_09675	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NZD89_09680	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
NZD89_09695	COG1193	negative regulation of DNA recombination
NZD89_09700	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_09705	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NZD89_09705	COG4499	WXG100 protein secretion system (Wss), protein YukC
NZD89_09715	COG0840	transmembrane signaling receptor activity
NZD89_09715	COG5278	phosphoserine phosphatase activity
NZD89_09740	COG0217	transcriptional regulatory protein
NZD89_09750	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
NZD89_09755	COG0632	four-way junction helicase activity
NZD89_09760	COG2255	four-way junction helicase activity
NZD89_09765	COG1191	sigma factor activity
NZD89_09810	COG3706	GGDEF domain
NZD89_09815	COG2323	membrane
NZD89_09820	COG2244	polysaccharide biosynthetic process
NZD89_09830	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NZD89_09835	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NZD89_09840	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NZD89_09845	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
NZD89_09845	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
NZD89_09850	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NZD89_09855	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NZD89_09860	COG1490	D-aminoacyl-tRNA deacylase activity
NZD89_09875	COG5001	Diguanylate cyclase
NZD89_09875	COG3300	MHYT domain
NZD89_09880	COG0475	glutathione-regulated potassium exporter activity
NZD89_09880	COG0569	domain protein
NZD89_09895	COG0456	acetyltransferase
NZD89_09905	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
NZD89_09910	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
NZD89_09915	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
NZD89_09930	COG1321	iron dependent repressor
NZD89_09935	COG1686	Belongs to the peptidase S11 family
NZD89_09945	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NZD89_09950	COG0681	Belongs to the peptidase S26 family
NZD89_09955	COG0477	Major facilitator Superfamily
NZD89_09960	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
NZD89_09975	COG0477	Major facilitator Superfamily
NZD89_09980	COG0420	3'-5' exonuclease activity
NZD89_09985	COG4717	serine-type aminopeptidase activity
NZD89_09990	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
NZD89_09995	COG1074	ATP-dependent DNA helicase activity
NZD89_10000	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NZD89_10010	COG0303	'Molybdopterin
NZD89_10015	COG0667	Aldo Keto reductase
NZD89_10030	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_10040	COG3595	metallopeptidase activity
NZD89_10050	COG1250	3-hydroxyacyl-CoA dehydrogenase
NZD89_10055	COG0039	L-malate dehydrogenase activity
NZD89_10060	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
NZD89_10060	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NZD89_10085	COG1414	Transcriptional regulator
NZD89_10105	COG4569	acetaldehyde dehydrogenase (acetylating) activity
NZD89_10120	COG1942	4-Oxalocrotonate Tautomerase
NZD89_10135	COG1131	(ABC) transporter
NZD89_10160	COG1250	3-hydroxyacyl-CoA dehydrogenase
NZD89_10165	COG1960	acyl-CoA dehydrogenase activity
NZD89_10205	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_10240	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_10250	COG0640	Transcriptional regulator
NZD89_10260	COG2814	Major facilitator Superfamily
NZD89_10270	COG2267	carboxylic ester hydrolase activity
NZD89_10280	COG4638	Rieske (2fe-2S)
NZD89_10285	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
NZD89_10290	COG0473	3-isopropylmalate dehydrogenase activity
NZD89_10295	COG1012	belongs to the aldehyde dehydrogenase family
NZD89_10300	COG2223	nitrite transmembrane transporter activity
NZD89_10310	COG0235	Class ii aldolase
NZD89_10320	COG0747	negative chemotaxis
NZD89_10330	COG2271	Major facilitator Superfamily
NZD89_10340	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NZD89_10340	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NZD89_10345	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NZD89_10355	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
NZD89_10365	COG0124	histidyl-tRNA synthetase
NZD89_10370	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
NZD89_10380	COG1959	2 iron, 2 sulfur cluster binding
NZD89_10385	COG1104	cysteine desulfurase activity
NZD89_10400	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NZD89_10410	COG0628	permease
NZD89_10420	COG4472	Bacterial protein of unknown function (DUF965)
NZD89_10425	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NZD89_10430	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NZD89_10435	COG0768	penicillin binding
NZD89_10440	COG4585	Histidine kinase
NZD89_10445	COG2197	response regulator
NZD89_10455	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
NZD89_10465	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NZD89_10470	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NZD89_10475	COG1713	HD superfamily hydrolase involved in NAD metabolism
NZD89_10480	COG0799	negative regulation of ribosome biogenesis
NZD89_10485	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
NZD89_10490	COG1321	iron dependent repressor
NZD89_10505	COG1252	NADH dehydrogenase
NZD89_10510	COG1466	dna polymerase III delta subunit
NZD89_10520	COG0268	Binds directly to 16S ribosomal RNA
NZD89_10525	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
NZD89_10530	COG0372	Belongs to the citrate synthase family
NZD89_10535	COG0583	DNA-binding transcription factor activity
NZD89_10555	COG0481	GTPase activity
NZD89_10560	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NZD89_10565	COG1420	regulation of RNA biosynthetic process
NZD89_10570	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NZD89_10575	COG0443	Heat shock 70 kDa protein
NZD89_10580	COG0484	heat shock protein binding
NZD89_10585	COG2264	protein methyltransferase activity
NZD89_10590	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NZD89_10595	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NZD89_10600	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NZD89_10605	COG1283	sodium-dependent phosphate transmembrane transporter activity
NZD89_10610	COG0828	Belongs to the bacterial ribosomal protein bS21 family
NZD89_10615	COG1610	YqeY-like protein
NZD89_10630	COG1702	phosphate starvation-inducible protein PhoH
NZD89_10635	COG1480	7TM receptor with intracellular HD hydrolase
NZD89_10640	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NZD89_10650	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NZD89_10660	COG1381	Involved in DNA repair and RecF pathway recombination
NZD89_10665	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
NZD89_10670	COG0358	DNA primase activity
NZD89_10675	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NZD89_10685	COG2384	SAM-dependent methyltransferase
NZD89_10690	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NZD89_10725	COG0154	amidase activity
NZD89_10735	COG1435	thymidine kinase activity
NZD89_10745	COG0463	Glycosyl transferase, family 2
NZD89_10750	COG1215	transferase activity, transferring glycosyl groups
NZD89_10755	COG1215	transferase activity, transferring glycosyl groups
NZD89_10790	COG1091	dTDP-4-dehydrorhamnose reductase activity
NZD89_10815	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
NZD89_10825	COG1181	Belongs to the D-alanine--D-alanine ligase family
NZD89_10835	COG0463	Glycosyl transferase, family 2
NZD89_10835	COG1216	Glycosyl transferase, family 2
NZD89_10850	COG0840	transmembrane signaling receptor activity
NZD89_10860	COG1733	regulation of RNA biosynthetic process
NZD89_10865	COG3384	dioxygenase
NZD89_10870	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
NZD89_10875	COG2814	Major facilitator Superfamily
NZD89_10880	COG0583	DNA-binding transcription factor activity
NZD89_10910	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NZD89_10915	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NZD89_10920	COG4106	trans-aconitate 2-methyltransferase activity
NZD89_10925	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NZD89_10930	COG0765	amino acid transport
NZD89_10945	COG3695	enzyme binding
NZD89_10960	COG2814	Major facilitator Superfamily
NZD89_10975	COG1380	Effector of murein hydrolase LrgA
NZD89_10980	COG1346	cytolysis
NZD89_10990	COG0583	DNA-binding transcription factor activity
NZD89_10995	COG0583	DNA-binding transcription factor activity
NZD89_11000	COG2176	DNA-directed DNA polymerase activity
NZD89_11005	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
NZD89_11010	COG1940	carbohydrate kinase activity
NZD89_11015	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NZD89_11020	COG0300	oxidoreductase activity
NZD89_11025	COG2814	Major facilitator Superfamily
NZD89_11065	COG2223	nitrite transmembrane transporter activity
NZD89_11075	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NZD89_11080	COG0306	phosphate transporter
NZD89_11085	COG1131	(ABC) transporter
NZD89_11090	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
NZD89_11100	COG0456	acetyltransferase
NZD89_11115	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
NZD89_11140	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NZD89_11150	COG0726	polysaccharide deacetylase
NZD89_11165	COG0602	queuosine metabolic process
NZD89_11170	COG0720	synthase
NZD89_11175	COG1733	regulation of RNA biosynthetic process
NZD89_11185	COG0778	Nitroreductase
NZD89_11190	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NZD89_11195	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NZD89_11200	COG1120	ATPase activity
NZD89_11205	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
NZD89_11210	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
NZD89_11215	COG0406	alpha-ribazole phosphatase activity
NZD89_11230	COG0439	Biotin carboxylase
NZD89_11235	COG0511	ligase activity, forming carbon-carbon bonds
NZD89_11240	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NZD89_11245	COG1024	Enoyl-CoA hydratase
NZD89_11250	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NZD89_11255	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
NZD89_11260	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NZD89_11265	COG1960	acyl-CoA dehydrogenase activity
NZD89_11270	COG2030	dehydratase
NZD89_11275	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NZD89_11280	COG0697	spore germination
NZD89_11305	COG0697	spore germination
NZD89_11310	COG2329	Antibiotic biosynthesis monooxygenase
NZD89_11325	COG1846	Transcriptional regulator
NZD89_11335	COG1132	(ABC) transporter
NZD89_11340	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NZD89_11345	COG2211	Major facilitator Superfamily
NZD89_11350	COG0384	phenazine biosynthesis protein PhzF
NZD89_11380	COG1335	isochorismatase
NZD89_11385	COG2271	Major facilitator Superfamily
NZD89_11390	COG1132	(ABC) transporter
NZD89_11395	COG1132	(ABC) transporter
NZD89_11425	COG1175	transmembrane transport
NZD89_11430	COG0395	ABC-type sugar transport system, permease component
NZD89_11440	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
NZD89_11445	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_11470	COG3534	alpha-L-arabinofuranosidase
NZD89_11520	COG1082	Xylose isomerase domain protein TIM barrel
NZD89_11560	COG0673	inositol 2-dehydrogenase activity
NZD89_11575	COG1175	transmembrane transport
NZD89_11580	COG0395	ABC-type sugar transport system, permease component
NZD89_11590	COG0673	inositol 2-dehydrogenase activity
NZD89_11620	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_11635	COG0673	inositol 2-dehydrogenase activity
NZD89_11640	COG3385	transposase activity
NZD89_11655	COG1940	carbohydrate kinase activity
NZD89_11660	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NZD89_11665	COG1073	alpha beta
NZD89_11685	COG1331	Highly conserved protein containing a thioredoxin domain
NZD89_11690	COG1331	Highly conserved protein containing a thioredoxin domain
NZD89_11700	COG2427	Protein of unknown function (DUF1641)
NZD89_11705	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NZD89_11710	COG0598	Magnesium transport protein CorA
NZD89_11715	COG1575	Belongs to the MenA family. Type 1 subfamily
NZD89_11720	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
NZD89_11725	COG0318	PFAM AMP-dependent synthetase and ligase
NZD89_11735	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
NZD89_11740	COG0596	Alpha beta hydrolase
NZD89_11765	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NZD89_11790	COG1388	LysM domain
NZD89_11790	COG0791	NLP P60 protein
NZD89_11800	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
NZD89_11805	COG0456	acetyltransferase
NZD89_11825	COG0747	negative chemotaxis
NZD89_11845	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
NZD89_11855	COG2076	Multidrug Resistance protein
NZD89_11870	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NZD89_11880	COG2096	Adenosyltransferase
NZD89_11895	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NZD89_11920	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
NZD89_11925	COG0732	type I restriction modification DNA specificity domain
NZD89_11930	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
NZD89_11935	COG4443	Transcriptional Coactivator p15 (PC4)
NZD89_11940	COG1484	DNA-dependent DNA replication
NZD89_11975	COG1484	DNA-dependent DNA replication
NZD89_11990	COG1914	H( )-stimulated, divalent metal cation uptake system
NZD89_12050	COG1742	UPF0060 membrane protein
NZD89_12100	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NZD89_12105	COG2210	Belongs to the sulfur carrier protein TusA family
NZD89_12110	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NZD89_12110	COG0425	Belongs to the sulfur carrier protein TusA family
NZD89_12115	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NZD89_12115	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NZD89_12125	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NZD89_12130	COG1937	Protein conserved in bacteria
NZD89_12155	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NZD89_12205	COG1802	Transcriptional regulator
NZD89_12215	COG1024	Enoyl-CoA hydratase
NZD89_12220	COG1960	acyl-CoA dehydrogenase activity
NZD89_12225	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NZD89_12230	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NZD89_12255	COG2814	Major facilitator Superfamily
NZD89_12255	COG0477	Major facilitator Superfamily
NZD89_12265	COG1012	belongs to the aldehyde dehydrogenase family
NZD89_12290	COG1012	belongs to the aldehyde dehydrogenase family
NZD89_12300	COG4974	Belongs to the 'phage' integrase family
NZD89_12320	COG2002	toxin-antitoxin pair type II binding
NZD89_12340	COG4166	transmembrane transport
NZD89_12345	COG0601	transmembrane transport
NZD89_12350	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NZD89_12355	COG0444	Belongs to the ABC transporter superfamily
NZD89_12375	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_12385	COG0537	adenosine 5'-monophosphoramidase activity
NZD89_12440	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NZD89_12485	COG3385	transposase activity
NZD89_12495	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_12500	COG2271	Major facilitator Superfamily
NZD89_12525	COG3627	carbon phosphorus lyase activity
NZD89_12540	COG3454	Phosphonate metabolism
NZD89_12550	COG3454	Phosphonate metabolism
NZD89_12560	COG2186	Transcriptional regulator
NZD89_12580	COG3627	carbon phosphorus lyase activity
NZD89_12585	COG4107	phosphonate C-P lyase system protein PhnK
NZD89_12590	COG4778	phosphonate C-P lyase system protein PhnL
NZD89_12595	COG3454	Phosphonate metabolism
NZD89_12600	COG3454	Phosphonate metabolism
NZD89_12610	COG5578	integral membrane protein
NZD89_12645	COG0346	lactoylglutathione lyase activity
NZD89_12655	COG1304	FMN binding
NZD89_12670	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
NZD89_12675	COG0583	DNA-binding transcription factor activity
NZD89_12695	COG0395	ABC-type sugar transport system, permease component
NZD89_12700	COG1175	transmembrane transport
NZD89_12705	COG1653	transport
NZD89_12735	COG5577	PFAM Coat F domain
NZD89_12745	COG1063	alcohol dehydrogenase
NZD89_12750	COG5577	PFAM Coat F domain
NZD89_12765	COG0531	amino acid
NZD89_12770	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NZD89_12775	COG2368	4-hydroxyphenylacetate
NZD89_12785	COG2031	fatty acid transporter
NZD89_12815	COG0697	spore germination
NZD89_12825	COG0531	amino acid
NZD89_12835	COG0745	RESPONSE REGULATOR receiver
NZD89_12840	COG2205	protein histidine kinase activity
NZD89_12845	COG0671	phosphoesterase, PA-phosphatase related
NZD89_12850	COG0586	Pfam SNARE associated Golgi protein
NZD89_12855	COG0586	Pfam SNARE associated Golgi protein
NZD89_12865	COG2244	polysaccharide biosynthetic process
NZD89_12875	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NZD89_12890	COG0673	inositol 2-dehydrogenase activity
NZD89_12920	COG1846	Transcriptional regulator
NZD89_12925	COG2084	Dehydrogenase
NZD89_12930	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NZD89_12940	COG0463	Glycosyl transferase, family 2
NZD89_12945	COG1316	TRANSCRIPTIONal
NZD89_12970	COG0387	Pfam Sodium calcium exchanger
NZD89_12980	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NZD89_12985	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NZD89_12995	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NZD89_13020	COG0322	excinuclease ABC activity
NZD89_13025	COG2009	succinate dehydrogenase
NZD89_13030	COG1053	succinate dehydrogenase
NZD89_13035	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
NZD89_13050	COG1054	Belongs to the UPF0176 family
NZD89_13060	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
NZD89_13065	COG2197	response regulator
NZD89_13070	COG1846	Transcriptional regulator
NZD89_13075	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
NZD89_13080	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NZD89_13085	COG0622	Phosphoesterase
NZD89_13100	COG0544	peptidyl-prolyl cis-trans isomerase activity
NZD89_13105	COG0740	serine-type endopeptidase activity
NZD89_13110	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NZD89_13115	COG1067	ATP-dependent peptidase activity
NZD89_13115	COG0470	DNA polymerase III
NZD89_13125	COG0218	Necessary for normal cell division and for the maintenance of normal septation
NZD89_13130	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
NZD89_13140	COG0181	hydroxymethylbilane synthase activity
NZD89_13150	COG0113	porphobilinogen synthase activity
NZD89_13180	COG0525	valine-tRNA ligase activity
NZD89_13185	COG0285	dihydrofolate synthase activity
NZD89_13190	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NZD89_13195	COG0076	glutamate decarboxylase activity
NZD89_13210	COG3584	3D domain protein
NZD89_13210	COG3583	domain protein
NZD89_13230	COG2003	Belongs to the UPF0758 family
NZD89_13235	COG1077	Cell shape determining protein MreB Mrl
NZD89_13240	COG1792	Involved in formation and maintenance of cell shape
NZD89_13250	COG0850	regulation of cytokinetic process
NZD89_13255	COG2894	cell division
NZD89_13275	COG2868	ribosomal protein
NZD89_13280	COG0211	Belongs to the bacterial ribosomal protein bL27 family
NZD89_13290	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NZD89_13300	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NZD89_13335	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
NZD89_13340	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NZD89_13350	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NZD89_13355	COG0404	The glycine cleavage system catalyzes the degradation of glycine
NZD89_13360	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NZD89_13365	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
NZD89_13370	COG0406	alpha-ribazole phosphatase activity
NZD89_13375	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NZD89_13380	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NZD89_13390	COG3854	ATPases associated with a variety of cellular activities
NZD89_13430	COG0511	ligase activity, forming carbon-carbon bonds
NZD89_13435	COG0439	Biotin carboxylase
NZD89_13440	COG1302	Protein conserved in bacteria
NZD89_13460	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NZD89_13465	COG0492	ferredoxin-NADP+ reductase activity
NZD89_13470	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NZD89_13475	COG1570	exodeoxyribonuclease VII activity
NZD89_13480	COG1722	exodeoxyribonuclease VII activity
NZD89_13495	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NZD89_13500	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
NZD89_13510	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NZD89_13515	COG0497	DNA recombination
NZD89_13520	COG0750	zinc metalloprotease
NZD89_13525	COG0745	RESPONSE REGULATOR receiver
NZD89_13535	COG2217	Heavy metal translocating P-type atpase
NZD89_13540	COG2217	Heavy metal translocating P-type atpase
NZD89_13550	COG1070	Carbohydrate kinase
NZD89_13555	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_13555	COG3347	Dehydrogenase
NZD89_13560	COG4952	isomerase
NZD89_13565	COG1556	Lactate utilization protein
NZD89_13570	COG1139	Iron-sulfur cluster binding protein
NZD89_13580	COG2186	Transcriptional regulator
NZD89_13590	COG0456	acetyltransferase
NZD89_13605	COG3253	May function as heme-dependent peroxidase
NZD89_13640	COG0315	cyclic pyranopterin monophosphate synthase activity
NZD89_13645	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NZD89_13650	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
NZD89_13655	COG0321	lipoyl(octanoyl) transferase activity
NZD89_13660	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
NZD89_13660	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
NZD89_13665	COG0346	lactoylglutathione lyase activity
NZD89_13670	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NZD89_13675	COG2195	Cleaves the N-terminal amino acid of tripeptides
NZD89_13680	COG1113	amino acid transport
NZD89_13685	COG0494	nUDIX hydrolase
NZD89_13690	COG1379	DNA repair
NZD89_13695	COG1300	Membrane
NZD89_13710	COG4974	Belongs to the 'phage' integrase family
NZD89_13715	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
NZD89_13720	COG1686	Belongs to the peptidase S11 family
NZD89_13730	COG1366	Belongs to the anti-sigma-factor antagonist family
NZD89_13735	COG2172	sigma factor antagonist activity
NZD89_13740	COG1191	sigma factor activity
NZD89_13750	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NZD89_13775	COG1994	Peptidase M50
NZD89_13785	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NZD89_13795	COG3874	Sporulation protein YtfJ
NZD89_13800	COG2715	membrane protein required for spore maturation
NZD89_13805	COG0700	Nucleoside recognition
NZD89_13810	COG1187	pseudouridine synthase activity
NZD89_13820	COG0745	RESPONSE REGULATOR receiver
NZD89_13825	COG5002	protein histidine kinase activity
NZD89_13840	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NZD89_13850	COG2339	peptidase activity
NZD89_13865	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NZD89_13870	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NZD89_13880	COG2226	methyltransferase
NZD89_13890	COG0210	DNA helicase
NZD89_13910	COG0582	viral genome integration into host DNA
NZD89_13915	COG1063	alcohol dehydrogenase
NZD89_13920	COG1063	alcohol dehydrogenase
NZD89_13925	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_13935	COG2721	sulfolactate sulfo-lyase activity
NZD89_13940	COG0473	3-isopropylmalate dehydrogenase activity
NZD89_13940	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NZD89_13945	COG2271	Major facilitator Superfamily
NZD89_13960	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_13980	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_13985	COG1129	ABC transporter
NZD89_13990	COG1172	Belongs to the binding-protein-dependent transport system permease family
NZD89_13995	COG1172	Belongs to the binding-protein-dependent transport system permease family
NZD89_14025	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NZD89_14045	COG2186	Transcriptional regulator
NZD89_14050	COG3254	rhamnose metabolic process
NZD89_14080	COG3385	transposase activity
NZD89_14105	COG0456	acetyltransferase
NZD89_14165	COG0204	Acyl-transferase
NZD89_14170	COG1597	lipid kinase activity
NZD89_14175	COG0438	transferase activity, transferring glycosyl groups
NZD89_14235	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_14265	COG1349	DNA-binding transcription factor activity
NZD89_14270	COG2814	Major facilitator Superfamily
NZD89_14280	COG3718	enzyme involved in inositol metabolism
NZD89_14285	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NZD89_14290	COG3962	Belongs to the TPP enzyme family
NZD89_14295	COG1082	Xylose isomerase domain protein TIM barrel
NZD89_14300	COG0673	inositol 2-dehydrogenase activity
NZD89_14305	COG1082	Xylose isomerase domain protein TIM barrel
NZD89_14310	COG1082	Xylose isomerase domain protein TIM barrel
NZD89_14315	COG0191	fructose-bisphosphate aldolase activity
NZD89_14320	COG1082	Xylose isomerase domain protein TIM barrel
NZD89_14360	COG0210	DNA helicase
NZD89_14390	COG1609	Transcriptional regulator
NZD89_14395	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
NZD89_14400	COG4862	establishment of competence for transformation
NZD89_14405	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NZD89_14420	COG2959	enzyme of heme biosynthesis
NZD89_14435	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
NZD89_14450	COG0539	negative regulation of cytoplasmic translation
NZD89_14465	COG1160	GTP binding
NZD89_14470	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
NZD89_14480	COG0509	glycine decarboxylation via glycine cleavage system
NZD89_14485	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
NZD89_14505	COG2226	methyltransferase
NZD89_14510	COG0142	geranyltranstransferase activity
NZD89_14515	COG0105	UTP biosynthetic process
NZD89_14520	COG1752	Esterase of the alpha-beta hydrolase superfamily
NZD89_14525	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
NZD89_14535	COG0517	IMP dehydrogenase activity
NZD89_14545	COG0508	dehydrogenase complex catalyzes the overall conversion of
NZD89_14550	COG1914	H( )-stimulated, divalent metal cation uptake system
NZD89_14555	COG0475	glutathione-regulated potassium exporter activity
NZD89_14575	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
NZD89_14600	COG0714	Associated with various cellular activities
NZD89_14605	COG4548	von Willebrand factor, type A
NZD89_14610	COG3103	Sh3 type 3 domain protein
NZD89_14610	COG0791	NLP P60 protein
NZD89_14610	COG1388	LysM domain
NZD89_14620	COG0656	L-ascorbic acid biosynthetic process
NZD89_14630	COG0564	pseudouridine synthase activity
NZD89_14650	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
NZD89_14655	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
NZD89_14660	COG4401	Chorismate mutase type I
NZD89_14665	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NZD89_14670	COG0134	indole-3-glycerol-phosphate synthase activity
NZD89_14675	COG0135	phosphoribosylanthranilate isomerase activity
NZD89_14680	COG0133	tryptophan synthase activity
NZD89_14685	COG0159	tryptophan synthase activity
NZD89_14690	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
NZD89_14710	COG5582	Belongs to the UPF0302 family
NZD89_14715	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
NZD89_14720	COG3949	Membrane
NZD89_14725	COG1968	undecaprenyl-diphosphatase activity
NZD89_14730	COG3314	Sporulation integral membrane protein YlbJ
NZD89_14735	COG1694	Mazg nucleotide pyrophosphohydrolase
NZD89_14745	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
NZD89_14750	COG0438	transferase activity, transferring glycosyl groups
NZD89_14765	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NZD89_14765	COG1199	ATP-dependent helicase activity
NZD89_14770	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
NZD89_14775	COG3285	dna ligase
NZD89_14775	COG1793	dna ligase
NZD89_14780	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
NZD89_14785	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
NZD89_14790	COG0402	S-adenosylhomocysteine deaminase activity
NZD89_14800	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
NZD89_14820	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NZD89_14825	COG0017	Asparaginyl-tRNA synthetase
NZD89_14830	COG3935	DnaD domain protein
NZD89_14840	COG1181	Belongs to the D-alanine--D-alanine ligase family
NZD89_14845	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
NZD89_14855	COG4946	Tricorn protease homolog
NZD89_14855	COG0823	Involved in the tonB-independent uptake of proteins
NZD89_14855	COG1506	peptidase
NZD89_14870	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NZD89_14875	COG1914	H( )-stimulated, divalent metal cation uptake system
NZD89_14890	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
NZD89_14895	COG2986	histidine ammonia-lyase
NZD89_14900	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NZD89_14920	COG1309	transcriptional regulator
NZD89_14925	COG3396	Phenylacetate-CoA oxygenase
NZD89_14940	COG2151	metal-sulfur cluster biosynthetic enzyme
NZD89_14950	COG1024	Enoyl-CoA hydratase
NZD89_14970	COG0386	Belongs to the glutathione peroxidase family
NZD89_14975	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
NZD89_14980	COG1228	amidohydrolase
NZD89_14990	COG0402	S-adenosylhomocysteine deaminase activity
NZD89_14995	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
NZD89_15010	COG0243	molybdopterin cofactor binding
NZD89_15020	COG3620	sequence-specific DNA binding
NZD89_15035	COG2271	Major facilitator Superfamily
NZD89_15075	COG1349	DNA-binding transcription factor activity
NZD89_15080	COG1012	belongs to the aldehyde dehydrogenase family
NZD89_15085	COG3718	enzyme involved in inositol metabolism
NZD89_15090	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NZD89_15095	COG3962	Belongs to the TPP enzyme family
NZD89_15100	COG1082	Xylose isomerase domain protein TIM barrel
NZD89_15105	COG0673	inositol 2-dehydrogenase activity
NZD89_15110	COG0191	fructose-bisphosphate aldolase activity
NZD89_15120	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NZD89_15130	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_15140	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_15170	COG1063	alcohol dehydrogenase
NZD89_15180	COG3385	transposase activity
NZD89_15195	COG1653	transport
NZD89_15200	COG0395	ABC-type sugar transport system, permease component
NZD89_15205	COG1175	transmembrane transport
NZD89_15270	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NZD89_15280	COG1083	cytidylyl-transferase
NZD89_15285	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_15295	COG2089	acid synthase
NZD89_15300	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
NZD89_15305	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NZD89_15310	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NZD89_15335	COG1609	Transcriptional regulator
NZD89_15355	COG0701	Predicted permease
NZD89_15390	COG0194	GDP metabolic process
NZD89_15395	COG0438	transferase activity, transferring glycosyl groups
NZD89_15400	COG0011	TIGRFAM Protein of
NZD89_15420	COG2808	Putative FMN-binding domain
NZD89_15425	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NZD89_15435	COG1595	DNA-templated transcription, initiation
NZD89_15440	COG2062	phosphohistidine phosphatase, SixA
NZD89_15470	COG2205	protein histidine kinase activity
NZD89_15480	COG0395	ABC-type sugar transport system, permease component
NZD89_15485	COG1175	transmembrane transport
NZD89_15510	COG1063	alcohol dehydrogenase
NZD89_15515	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
NZD89_15520	COG4638	Rieske (2fe-2S)
NZD89_15525	COG2814	Major facilitator Superfamily
NZD89_15530	COG0508	dehydrogenase complex catalyzes the overall conversion of
NZD89_15530	COG0596	Alpha beta hydrolase
NZD89_15545	COG2871	sodium ion transport
NZD89_15560	COG1917	Cupin 2, conserved barrel domain protein
NZD89_15560	COG2207	Transcriptional regulator
NZD89_15580	COG0395	ABC-type sugar transport system, permease component
NZD89_15585	COG1175	transmembrane transport
NZD89_15595	COG1063	alcohol dehydrogenase
NZD89_15600	COG4154	Belongs to the RbsD FucU family
NZD89_15615	COG0667	Aldo Keto reductase
NZD89_15620	COG0673	inositol 2-dehydrogenase activity
NZD89_15635	COG0395	ABC-type sugar transport system, permease component
NZD89_15640	COG4209	transmembrane transport
NZD89_15665	COG3708	Transcriptional regulator
NZD89_15665	COG2207	Transcriptional regulator
NZD89_15685	COG1556	Lactate utilization protein
NZD89_15690	COG1139	Iron-sulfur cluster binding protein
NZD89_15695	COG0247	lactate metabolic process
NZD89_15705	COG4213	ABC transporter substrate-binding protein
NZD89_15710	COG1172	Belongs to the binding-protein-dependent transport system permease family
NZD89_15715	COG1129	ABC transporter
NZD89_15720	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
NZD89_15745	COG2207	Transcriptional regulator
NZD89_15790	COG0823	Involved in the tonB-independent uptake of proteins
NZD89_15795	COG0673	inositol 2-dehydrogenase activity
NZD89_15805	COG0395	ABC-type sugar transport system, permease component
NZD89_15810	COG1175	transmembrane transport
NZD89_15815	COG1082	Xylose isomerase domain protein TIM barrel
NZD89_15820	COG2207	Transcriptional regulator
NZD89_15825	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NZD89_15840	COG5285	phytanoyl-CoA dioxygenase
NZD89_15855	COG1063	alcohol dehydrogenase
NZD89_15860	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NZD89_15880	COG0714	Associated with various cellular activities
NZD89_15900	COG1132	(ABC) transporter
NZD89_15920	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NZD89_15930	COG1132	(ABC) transporter
NZD89_15965	COG0438	transferase activity, transferring glycosyl groups
NZD89_15995	COG0438	transferase activity, transferring glycosyl groups
NZD89_16000	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
NZD89_16005	COG0297	glycogen (starch) synthase activity
NZD89_16015	COG0438	transferase activity, transferring glycosyl groups
NZD89_16020	COG0438	transferase activity, transferring glycosyl groups
NZD89_16025	COG0438	transferase activity, transferring glycosyl groups
NZD89_16030	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
NZD89_16040	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
NZD89_16050	COG0489	protein tyrosine kinase activity
NZD89_16065	COG1396	sequence-specific DNA binding
NZD89_16090	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
NZD89_16110	COG3119	arylsulfatase activity
NZD89_16130	COG2814	Major facilitator Superfamily
NZD89_16135	COG2814	Major facilitator Superfamily
NZD89_16145	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NZD89_16145	COG2207	Transcriptional regulator
NZD89_16150	COG3119	arylsulfatase activity
NZD89_16155	COG0673	inositol 2-dehydrogenase activity
NZD89_16160	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
NZD89_16165	COG1012	belongs to the aldehyde dehydrogenase family
NZD89_16180	COG1473	amidohydrolase
NZD89_16185	COG2423	ornithine cyclodeaminase activity
NZD89_16190	COG0006	proline dipeptidase activity
NZD89_16195	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NZD89_16200	COG2508	Transcriptional regulator
NZD89_16200	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
NZD89_16205	COG0697	spore germination
NZD89_16215	COG0667	Aldo Keto reductase
NZD89_16220	COG4989	oxidoreductase activity
NZD89_16225	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
NZD89_16265	COG0137	argininosuccinate synthase activity
NZD89_16270	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
NZD89_16275	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NZD89_16300	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NZD89_16305	COG0772	Belongs to the SEDS family
NZD89_16325	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_16335	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NZD89_16340	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NZD89_16345	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
NZD89_16350	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NZD89_16355	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
NZD89_16360	COG0517	IMP dehydrogenase activity
NZD89_16360	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
NZD89_16395	COG1396	sequence-specific DNA binding
NZD89_16410	COG1215	transferase activity, transferring glycosyl groups
NZD89_16415	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
NZD89_16420	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NZD89_16425	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NZD89_16445	COG1349	DNA-binding transcription factor activity
NZD89_16455	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NZD89_16460	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NZD89_16480	COG0431	NADPH-dependent FMN reductase
NZD89_16485	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NZD89_16490	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NZD89_16500	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NZD89_16505	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NZD89_16515	COG5583	Uncharacterized small protein (DUF2292)
NZD89_16520	COG2323	membrane
NZD89_16525	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NZD89_16535	COG0395	ABC-type sugar transport system, permease component
NZD89_16540	COG1175	transmembrane transport
NZD89_16545	COG1653	transport
NZD89_16550	COG1609	Transcriptional regulator
NZD89_16560	COG3706	GGDEF domain
NZD89_16565	COG0702	epimerase
NZD89_16595	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NZD89_16600	COG2816	NAD+ diphosphatase activity
NZD89_16605	COG0456	acetyltransferase
NZD89_16675	COG0076	glutamate decarboxylase activity
NZD89_16685	COG0395	ABC-type sugar transport system, permease component
NZD89_16695	COG1653	transport
NZD89_16700	COG1609	Transcriptional regulator
NZD89_16710	COG0584	glycerophosphoryl diester phosphodiesterase
NZD89_16720	COG2814	Major facilitator Superfamily
NZD89_16750	COG1473	amidohydrolase
NZD89_16755	COG4948	Mandelate Racemase Muconate Lactonizing
NZD89_16760	COG0833	amino acid
NZD89_16790	COG0456	acetyltransferase
NZD89_16820	COG0395	ABC-type sugar transport system, permease component
NZD89_16825	COG4209	transmembrane transport
NZD89_16835	COG1609	Transcriptional regulator
NZD89_16840	COG0667	Aldo Keto reductase
NZD89_16850	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_16875	COG1940	carbohydrate kinase activity
NZD89_16880	COG0363	glucosamine-6-phosphate deaminase activity
NZD89_16885	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NZD89_16905	COG0697	spore germination
NZD89_16925	COG0583	DNA-binding transcription factor activity
NZD89_16930	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
NZD89_16940	COG0163	prenyltransferase activity
NZD89_16950	COG3344	reverse transcriptase
NZD89_16980	COG1335	isochorismatase
NZD89_17000	COG5001	Diguanylate cyclase
NZD89_17005	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
NZD89_17015	COG0531	amino acid
NZD89_17020	COG0460	homoserine dehydrogenase
NZD89_17025	COG3459	Glycosyltransferase 36 associated
NZD89_17050	COG1024	Enoyl-CoA hydratase
NZD89_17060	COG0646	methionine synthase
NZD89_17060	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
NZD89_17065	COG0646	methionine synthase
NZD89_17065	COG1410	methionine synthase
NZD89_17085	COG0423	glycine-tRNA ligase activity
NZD89_17095	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NZD89_17100	COG0174	glutamine synthetase
NZD89_17105	COG0789	Transcriptional regulator
NZD89_17110	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
NZD89_17115	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NZD89_17130	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NZD89_17135	COG0464	growth
NZD89_17140	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
NZD89_17160	COG0697	spore germination
NZD89_17165	COG2860	membrane
NZD89_17170	COG0235	Class ii aldolase
NZD89_17180	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
NZD89_17260	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NZD89_17265	COG2521	methyltransferase
NZD89_17265	COG2136	Putative SAM-dependent methyltransferase
NZD89_17270	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NZD89_17275	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
NZD89_17285	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NZD89_17305	COG0189	ligase activity
NZD89_17310	COG0189	ligase activity
NZD89_17315	COG3852	Histidine kinase
NZD89_17345	COG2359	stage V sporulation protein S
NZD89_17350	COG1692	metallophosphoesterase
NZD89_17355	COG1418	mRNA catabolic process
NZD89_17360	COG2137	regulation of response to DNA damage stimulus
NZD89_17365	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NZD89_17375	COG1546	Belongs to the CinA family
NZD89_17375	COG1058	Belongs to the CinA family
NZD89_17380	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NZD89_17385	COG1666	GTP binding
NZD89_17390	COG1426	Protein conserved in bacteria
NZD89_17415	COG1674	ftsk spoiiie
NZD89_17430	COG0740	serine-type endopeptidase activity
NZD89_17435	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NZD89_17440	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NZD89_17445	COG0527	aspartate kinase activity
NZD89_17450	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NZD89_17455	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NZD89_17460	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NZD89_17470	COG0612	Peptidase, M16
NZD89_17475	COG0726	polysaccharide deacetylase
NZD89_17480	COG1185	polyribonucleotide nucleotidyltransferase activity
NZD89_17485	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NZD89_17490	COG0196	riboflavin kinase activity
NZD89_17500	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
NZD89_17505	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NZD89_17515	COG1358	cellular component organization or biogenesis
NZD89_17520	COG2740	Nucleic-acid-binding protein implicated in transcription termination
NZD89_17525	COG0195	Participates in both transcription termination and antitermination
NZD89_17530	COG0779	Required for maturation of 30S ribosomal subunits
NZD89_17535	COG1217	gtp-binding protein TYPA
NZD89_17540	COG0077	Prephenate dehydratase
NZD89_17545	COG0750	zinc metalloprotease
NZD89_17550	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
NZD89_17555	COG4589	Belongs to the CDS family
NZD89_17560	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NZD89_17570	COG0528	UMP kinase activity
NZD89_17575	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NZD89_17580	COG0052	Belongs to the universal ribosomal protein uS2 family
NZD89_17590	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
NZD89_17595	COG1776	CheC inhibitor of MCP methylation
NZD89_17600	COG0835	chemotaxis
NZD89_17605	COG0643	Histidine kinase
NZD89_17605	COG2198	Histidine kinase
NZD89_17610	COG2201	protein-glutamate methylesterase activity
NZD89_17615	COG0455	bacterial-type flagellum organization
NZD89_17620	COG1419	protein localization to endoplasmic reticulum
NZD89_17625	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NZD89_17630	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NZD89_17635	COG1684	flagellar biosynthetic protein fliR
NZD89_17640	COG1987	bacterial-type flagellum assembly
NZD89_17645	COG1338	Plays a role in the flagellum-specific transport system
NZD89_17655	COG2201	protein-glutamate methylesterase activity
NZD89_17660	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NZD89_17660	COG1776	CheC inhibitor of MCP methylation
NZD89_17665	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NZD89_17680	COG4786	Flagellar basal body rod
NZD89_17710	COG1157	protein secretion by the type III secretion system
NZD89_17720	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NZD89_17725	COG1766	The M ring may be actively involved in energy transduction
NZD89_17745	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
NZD89_17750	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
NZD89_17755	COG4974	Belongs to the 'phage' integrase family
NZD89_17760	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
NZD89_17765	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NZD89_17785	COG0531	amino acid
NZD89_17840	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NZD89_17855	COG2205	protein histidine kinase activity
NZD89_17885	COG1879	ABC-type sugar transport system periplasmic component
NZD89_17890	COG1172	Belongs to the binding-protein-dependent transport system permease family
NZD89_17900	COG1869	D-ribose catabolic process
NZD89_17905	COG1609	Transcriptional regulator
NZD89_17910	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NZD89_17935	COG2814	Major facilitator Superfamily
NZD89_17940	COG0583	DNA-binding transcription factor activity
NZD89_17945	COG2271	Major facilitator Superfamily
NZD89_17975	COG1063	alcohol dehydrogenase
NZD89_17985	COG0583	DNA-binding transcription factor activity
NZD89_17990	COG0758	DNA mediated transformation
NZD89_17990	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NZD89_17995	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
NZD89_18000	COG0045	succinate-CoA ligase (ADP-forming) activity
NZD89_18010	COG0606	chelatase, subunit chli
NZD89_18025	COG3344	reverse transcriptase
NZD89_18030	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_18045	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_18060	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_18100	COG1657	PFAM Prenyltransferase squalene oxidase
NZD89_18110	COG0400	carboxylic ester hydrolase activity
NZD89_18115	COG0346	lactoylglutathione lyase activity
NZD89_18120	COG2259	Doxx family
NZD89_18125	COG1733	regulation of RNA biosynthetic process
NZD89_18170	COG0697	spore germination
NZD89_18175	COG0697	spore germination
NZD89_18195	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_18200	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_18210	COG1428	Deoxynucleoside kinase
NZD89_18215	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NZD89_18240	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_18260	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NZD89_18270	COG1335	isochorismatase
NZD89_18290	COG0456	acetyltransferase
NZD89_18320	COG4499	WXG100 protein secretion system (Wss), protein YukC
NZD89_18320	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NZD89_18335	COG4632	Exopolysaccharide biosynthesis protein
NZD89_18335	COG5434	Belongs to the glycosyl hydrolase 28 family
NZD89_18340	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NZD89_18345	COG0166	Belongs to the GPI family
NZD89_18350	COG0842	Transport permease protein
NZD89_18365	COG1131	(ABC) transporter
NZD89_18370	COG2197	response regulator
NZD89_18375	COG4585	Histidine kinase
NZD89_18380	COG5002	protein histidine kinase activity
NZD89_18400	COG5002	protein histidine kinase activity
NZD89_18410	COG1289	transmembrane transporter activity
NZD89_18430	COG0673	inositol 2-dehydrogenase activity
NZD89_18445	COG1917	Cupin 2, conserved barrel domain protein
NZD89_18445	COG4977	sequence-specific DNA binding
NZD89_18455	COG0561	phosphatase activity
NZD89_18475	COG0346	lactoylglutathione lyase activity
NZD89_18490	COG2807	transmembrane transport
NZD89_18510	COG0792	nuclease activity
NZD89_18515	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NZD89_18525	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NZD89_18535	COG0335	large ribosomal subunit rRNA binding
NZD89_18560	COG1607	acyl-coa hydrolase
NZD89_18565	COG0739	heme binding
NZD89_18575	COG0564	pseudouridine synthase activity
NZD89_18600	COG1070	Carbohydrate kinase
NZD89_18610	COG1113	amino acid transport
NZD89_18765	COG0336	Belongs to the RNA methyltransferase TrmD family
NZD89_18780	COG1837	Belongs to the UPF0109 family
NZD89_18785	COG0228	four-way junction DNA binding
NZD89_18790	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NZD89_18795	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
NZD89_18800	COG0552	protein localization to endoplasmic reticulum
NZD89_18805	COG1196	nuclear chromosome segregation
NZD89_18815	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NZD89_18820	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NZD89_18825	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_18830	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
NZD89_18835	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NZD89_18845	COG1349	DNA-binding transcription factor activity
NZD89_18850	COG0333	Belongs to the bacterial ribosomal protein bL32 family
NZD89_18860	COG1752	Esterase of the alpha-beta hydrolase superfamily
NZD89_18865	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NZD89_18870	COG0742	ribosomal rna small subunit methyltransferase
NZD89_18880	COG0154	amidase activity
NZD89_18890	COG0688	phosphatidylethanolamine metabolic process
NZD89_18895	COG1464	Belongs to the NlpA lipoprotein family
NZD89_18900	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NZD89_18905	COG2011	ABC-type metal ion transport system permease component
NZD89_18915	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NZD89_18925	COG0227	Belongs to the bacterial ribosomal protein bL28 family
NZD89_18935	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
NZD89_18940	COG1162	GTPase activity
NZD89_18945	COG2815	serine threonine protein kinase
NZD89_18945	COG0515	serine threonine protein kinase
NZD89_18950	COG0631	protein serine/threonine phosphatase activity
NZD89_18955	COG0820	rRNA (adenine-C2-)-methyltransferase activity
NZD89_18960	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NZD89_18960	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NZD89_18965	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NZD89_18970	COG0242	peptide deformylase activity
NZD89_18975	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NZD89_18980	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NZD89_18985	COG1758	RNA polymerase activity
NZD89_18990	COG1561	YicC-like family, N-terminal region
NZD89_18995	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
NZD89_19010	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NZD89_19020	COG0284	orotidine-5'-phosphate decarboxylase activity
NZD89_19030	COG0505	Belongs to the CarA family
NZD89_19045	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
NZD89_19050	COG0564	pseudouridine synthase activity
NZD89_19060	COG1809	phosphosulfolactate synthase activity
NZD89_19075	COG3599	regulation of cell shape
NZD89_19080	COG2302	S4 RNA-binding domain
NZD89_19090	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NZD89_19095	COG1496	oxidoreductase activity
NZD89_19100	COG1873	PFAM PRC-barrel domain
NZD89_19105	COG1191	sigma factor activity
NZD89_19110	COG1191	sigma factor activity
NZD89_19120	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NZD89_19125	COG0849	cell division
NZD89_19130	COG3856	small basic protein
NZD89_19135	COG3879	Bacterial protein of unknown function (DUF881)
NZD89_19145	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
NZD89_19150	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NZD89_19155	COG0812	UDP-N-acetylmuramate dehydrogenase activity
NZD89_19160	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NZD89_19165	COG0772	Belongs to the SEDS family
NZD89_19170	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NZD89_19175	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NZD89_19180	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NZD89_19185	COG0768	penicillin binding
NZD89_19190	COG0768	penicillin binding
NZD89_19200	COG0275	rRNA processing
NZD89_19205	COG2001	Belongs to the MraZ family
NZD89_19210	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
NZD89_19215	COG1902	pentaerythritol trinitrate reductase activity
NZD89_19245	COG0301	tRNA thio-modification
NZD89_19250	COG1104	cysteine desulfurase activity
NZD89_19255	COG0740	serine-type endopeptidase activity
NZD89_19285	COG3906	Belongs to the UPF0473 family
NZD89_19290	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NZD89_19310	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NZD89_19315	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
NZD89_19320	COG0527	aspartate kinase activity
NZD89_19325	COG0165	Argininosuccinate lyase
NZD89_19330	COG0137	argininosuccinate synthase activity
NZD89_19335	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NZD89_19340	COG0070	glutamate synthase
NZD89_19340	COG0067	glutamate synthase
NZD89_19340	COG0069	glutamate synthase activity
NZD89_19345	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
NZD89_19350	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NZD89_19355	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
NZD89_19360	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NZD89_19370	COG1832	CoA-binding protein
NZD89_19425	COG0395	ABC-type sugar transport system, permease component
NZD89_19435	COG1175	transmembrane transport
NZD89_19465	COG0531	amino acid
NZD89_19470	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NZD89_19475	COG1012	belongs to the aldehyde dehydrogenase family
NZD89_19490	COG3938	Belongs to the proline racemase family
NZD89_19520	COG0747	negative chemotaxis
NZD89_19525	COG0006	proline dipeptidase activity
NZD89_19540	COG4608	Belongs to the ABC transporter superfamily
NZD89_19545	COG0444	Belongs to the ABC transporter superfamily
NZD89_19570	COG0582	viral genome integration into host DNA
NZD89_19585	COG0512	Glutamine amidotransferase of anthranilate synthase
NZD89_19680	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NZD89_19685	COG2002	toxin-antitoxin pair type II binding
NZD89_19690	COG0251	oxidation-reduction process
NZD89_19700	COG1408	metallophosphoesterase
NZD89_19705	COG0531	amino acid
NZD89_19710	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NZD89_19725	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
NZD89_19730	COG3290	protein histidine kinase activity
NZD89_19730	COG3829	transcription factor binding
NZD89_19740	COG1744	ABC transporter substrate-binding protein PnrA-like
NZD89_19755	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_19760	COG1063	alcohol dehydrogenase
NZD89_19770	COG2721	sulfolactate sulfo-lyase activity
NZD89_19780	COG2721	sulfolactate sulfo-lyase activity
NZD89_19800	COG0163	prenyltransferase activity
NZD89_19805	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
NZD89_19810	COG0583	DNA-binding transcription factor activity
NZD89_19815	COG0494	nUDIX hydrolase
NZD89_19845	COG2814	Major facilitator Superfamily
NZD89_19855	COG0346	lactoylglutathione lyase activity
NZD89_19875	COG0725	ABC transporter, periplasmic molybdate-binding protein
NZD89_19890	COG2095	MarC family integral membrane protein
NZD89_19895	COG2140	Oxalate decarboxylase
NZD89_19910	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NZD89_19915	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NZD89_19945	COG0183	Belongs to the thiolase family
NZD89_19950	COG1609	Transcriptional regulator
NZD89_19955	COG2814	Major facilitator Superfamily
NZD89_19980	COG1349	DNA-binding transcription factor activity
NZD89_19985	COG0673	inositol 2-dehydrogenase activity
NZD89_19990	COG0673	inositol 2-dehydrogenase activity
NZD89_19995	COG0395	ABC-type sugar transport system, permease component
NZD89_20000	COG1175	transmembrane transport
NZD89_20025	COG1294	oxidase, subunit
NZD89_20030	COG1271	oxidase subunit
NZD89_20045	COG0477	Major facilitator Superfamily
NZD89_20050	COG1335	isochorismatase
NZD89_20065	COG1012	belongs to the aldehyde dehydrogenase family
NZD89_20080	COG0668	transmembrane transport
NZD89_20085	COG0640	Transcriptional regulator
NZD89_20090	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NZD89_20105	COG3037	sugar-specific permease SgaT UlaA
NZD89_20115	COG3711	transcriptional antiterminator
NZD89_20115	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NZD89_20135	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NZD89_20175	COG0395	ABC-type sugar transport system, permease component
NZD89_20185	COG0673	inositol 2-dehydrogenase activity
NZD89_20205	COG1793	dna ligase
NZD89_20255	COG5002	protein histidine kinase activity
NZD89_20270	COG0243	molybdopterin cofactor binding
NZD89_20275	COG0741	lytic transglycosylase activity
NZD89_20275	COG1388	LysM domain
NZD89_20280	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NZD89_20285	COG3344	reverse transcriptase
NZD89_20385	COG2124	cytochrome p450
NZD89_20410	COG0693	protein deglycase activity
NZD89_20440	COG2315	Protein conserved in bacteria
NZD89_20445	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_20465	COG0640	Transcriptional regulator
NZD89_20480	COG3344	reverse transcriptase
NZD89_20485	COG3344	reverse transcriptase
NZD89_20490	COG0477	Major facilitator Superfamily
NZD89_20505	COG1484	DNA-dependent DNA replication
NZD89_20515	COG3344	reverse transcriptase
NZD89_20535	COG1172	Belongs to the binding-protein-dependent transport system permease family
NZD89_20550	COG1070	Carbohydrate kinase
NZD89_20555	COG1105	Belongs to the carbohydrate kinase PfkB family
NZD89_20560	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_20565	COG1609	Transcriptional regulator
NZD89_20580	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NZD89_20595	COG0314	molybdopterin synthase activity
NZD89_20605	COG0315	cyclic pyranopterin monophosphate synthase activity
NZD89_20610	COG1271	oxidase subunit
NZD89_20620	COG1132	(ABC) transporter
NZD89_20625	COG4988	ABC transporter
NZD89_20630	COG1294	oxidase, subunit
NZD89_20635	COG1271	oxidase subunit
NZD89_20665	COG0746	molybdenum cofactor guanylyltransferase activity
NZD89_20675	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NZD89_20680	COG2427	Protein of unknown function (DUF1641)
NZD89_20685	COG3383	formate dehydrogenase (NAD+) activity
NZD89_20690	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_20695	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_20700	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_20720	COG2860	membrane
NZD89_20725	COG0315	cyclic pyranopterin monophosphate synthase activity
NZD89_20740	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NZD89_20845	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_20855	COG1105	Belongs to the carbohydrate kinase PfkB family
NZD89_20870	COG1349	DNA-binding transcription factor activity
NZD89_20875	COG1940	carbohydrate kinase activity
NZD89_20880	COG0363	glucosamine-6-phosphate deaminase activity
NZD89_20890	COG1105	Belongs to the carbohydrate kinase PfkB family
NZD89_20895	COG0531	amino acid
NZD89_20910	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_20925	COG2720	vancomycin resistance protein
NZD89_20935	COG0604	alcohol dehydrogenase
NZD89_20975	COG0747	negative chemotaxis
NZD89_20990	COG0601	transmembrane transport
NZD89_20995	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NZD89_21000	COG4608	Belongs to the ABC transporter superfamily
NZD89_21005	COG0444	Belongs to the ABC transporter superfamily
NZD89_21020	COG0494	nUDIX hydrolase
NZD89_21025	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
NZD89_21030	COG1363	Peptidase, m42
NZD89_21035	COG3377	Domain of unknown function (DUF1805)
NZD89_21045	COG0586	Pfam SNARE associated Golgi protein
NZD89_21050	COG1078	dGTPase activity
NZD89_21055	COG0316	Belongs to the HesB IscA family
NZD89_21060	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
NZD89_21065	COG1982	Orn Lys Arg decarboxylase major
NZD89_21085	COG0436	Aminotransferase
NZD89_21090	COG0772	Belongs to the SEDS family
NZD89_21095	COG0584	glycerophosphoryl diester phosphodiesterase
NZD89_21105	COG0772	Belongs to the SEDS family
NZD89_21125	COG1956	GAF domain-containing protein
NZD89_21145	COG3832	glyoxalase III activity
NZD89_21150	COG0640	Transcriptional regulator
NZD89_21155	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_21165	COG2050	protein possibly involved in aromatic compounds catabolism
NZD89_21175	COG0083	homoserine kinase activity
NZD89_21180	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
NZD89_21185	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NZD89_21190	COG0612	Peptidase, M16
NZD89_21195	COG0612	Peptidase, M16
NZD89_21210	COG0477	Major facilitator Superfamily
NZD89_21215	COG0768	penicillin binding
NZD89_21220	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
NZD89_21225	COG1960	acyl-CoA dehydrogenase activity
NZD89_21230	COG0183	Belongs to the thiolase family
NZD89_21235	COG1250	3-hydroxyacyl-CoA dehydrogenase
NZD89_21235	COG1024	Enoyl-CoA hydratase
NZD89_21240	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
NZD89_21250	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
NZD89_21265	COG0537	adenosine 5'-monophosphoramidase activity
NZD89_21290	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NZD89_21295	COG0587	DNA-directed DNA polymerase activity
NZD89_21305	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NZD89_21320	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NZD89_21350	COG0189	ligase activity
NZD89_21355	COG0438	transferase activity, transferring glycosyl groups
NZD89_21360	COG0531	amino acid
NZD89_21370	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NZD89_21375	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NZD89_21385	COG0823	Involved in the tonB-independent uptake of proteins
NZD89_21385	COG1506	peptidase
NZD89_21385	COG4946	Tricorn protease homolog
NZD89_21390	COG0114	fumarate hydratase activity
NZD89_21405	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
NZD89_21410	COG2086	electron transfer activity
NZD89_21415	COG1309	transcriptional regulator
NZD89_21425	COG0450	alkyl hydroperoxide reductase
NZD89_21440	COG1131	(ABC) transporter
NZD89_21445	COG1725	Transcriptional regulator
NZD89_21450	COG2814	Major facilitator Superfamily
NZD89_21455	COG1664	Polymer-forming cytoskeletal
NZD89_21455	COG1664	Polymer-forming cytoskeletal
NZD89_21465	COG0789	Transcriptional regulator
NZD89_21480	COG0719	Fe-S assembly protein
NZD89_21485	COG0822	iron-sulfur transferase activity
NZD89_21490	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NZD89_21495	COG0719	Fe-S assembly protein
NZD89_21500	COG0396	ATPase activity
NZD89_21505	COG2151	metal-sulfur cluster biosynthetic enzyme
NZD89_21510	COG0686	Belongs to the AlaDH PNT family
NZD89_21525	COG1595	DNA-templated transcription, initiation
NZD89_21530	COG0167	dihydroorotate dehydrogenase activity
NZD89_21535	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
NZD89_21540	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NZD89_21545	COG0302	gtp cyclohydrolase
NZD89_21575	COG0586	Pfam SNARE associated Golgi protein
NZD89_21585	COG0477	Major facilitator Superfamily
NZD89_21625	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NZD89_21630	COG1506	peptidase
NZD89_21630	COG4946	Tricorn protease homolog
NZD89_21630	COG0823	Involved in the tonB-independent uptake of proteins
NZD89_21635	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
NZD89_21640	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
NZD89_21645	COG1363	Peptidase, m42
NZD89_21660	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NZD89_21665	COG1295	ribonuclease BN
NZD89_21670	COG0564	pseudouridine synthase activity
NZD89_21695	COG1022	Amp-dependent synthetase and ligase
NZD89_21710	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NZD89_21720	COG1213	nucleotidyl transferase
NZD89_21730	COG0438	transferase activity, transferring glycosyl groups
NZD89_21735	COG2391	methyltransferase activity
NZD89_21740	COG1960	acyl-CoA dehydrogenase activity
NZD89_21785	COG0482	sulfurtransferase activity
NZD89_21795	COG0697	spore germination
NZD89_21800	COG0583	DNA-binding transcription factor activity
NZD89_21830	COG1122	ATPase activity
NZD89_21835	COG4721	ABC-type cobalt transport system, permease component
NZD89_21840	COG1494	fructose-1,6-bisphosphatase
NZD89_21845	COG0697	spore germination
NZD89_21850	COG0667	Aldo Keto reductase
NZD89_21855	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NZD89_21855	COG0140	phosphoribosyl-ATP diphosphatase activity
NZD89_21865	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
NZD89_21870	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NZD89_21875	COG0131	Imidazoleglycerol-phosphate dehydratase
NZD89_21880	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NZD89_21885	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
NZD89_21890	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
NZD89_21895	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
NZD89_21905	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NZD89_21910	COG0109	protoheme IX farnesyltransferase activity
NZD89_21915	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NZD89_21920	COG0116	Belongs to the methyltransferase superfamily
NZD89_21925	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
NZD89_21930	COG1979	alcohol dehydrogenase
NZD89_21940	COG2081	HI0933 family
NZD89_21955	COG0424	maF-like protein
NZD89_21960	COG0626	cystathionine gamma-synthase activity
NZD89_21970	COG2363	Small membrane protein
NZD89_21975	COG0154	amidase activity
NZD89_21995	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NZD89_22015	COG5002	protein histidine kinase activity
NZD89_22030	COG1105	Belongs to the carbohydrate kinase PfkB family
NZD89_22040	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NZD89_22045	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
NZD89_22045	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NZD89_22045	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
NZD89_22055	COG1077	Cell shape determining protein MreB Mrl
NZD89_22065	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NZD89_22070	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
NZD89_22075	COG1085	galactose-1-phosphate uridylyltransferase
NZD89_22080	COG1349	DNA-binding transcription factor activity
NZD89_22090	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NZD89_22100	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
NZD89_22105	COG1012	belongs to the aldehyde dehydrogenase family
NZD89_22120	COG0252	asparaginase activity
NZD89_22125	COG0477	Major facilitator Superfamily
NZD89_22135	COG1609	Transcriptional regulator
NZD89_22145	COG3973	AAA domain
NZD89_22150	COG0598	Magnesium transport protein CorA
NZD89_22160	COG0318	PFAM AMP-dependent synthetase and ligase
NZD89_22165	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NZD89_22175	COG1335	isochorismatase
NZD89_22180	COG0220	tRNA (guanine-N7-)-methyltransferase activity
NZD89_22185	COG1012	belongs to the aldehyde dehydrogenase family
NZD89_22200	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NZD89_22205	COG0667	Aldo Keto reductase
NZD89_22230	COG3011	Protein conserved in bacteria
NZD89_22235	COG3361	conserved protein (COG2071)
NZD89_22245	COG1635	Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
NZD89_22255	COG3153	acetyltransferase
NZD89_22255	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NZD89_22270	COG2183	response to ionizing radiation
NZD89_22275	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NZD89_22285	COG2046	Belongs to the sulfate adenylyltransferase family
NZD89_22290	COG0529	Catalyzes the synthesis of activated sulfate
NZD89_22305	COG0753	catalase activity
NZD89_22315	COG1733	regulation of RNA biosynthetic process
NZD89_22325	COG1671	Belongs to the UPF0178 family
NZD89_22330	COG1119	ATPase activity
NZD89_22340	COG0513	Belongs to the DEAD box helicase family
NZD89_22345	COG0531	amino acid
NZD89_22355	COG0488	(ABC) transporter
NZD89_22375	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NZD89_22385	COG0519	Catalyzes the synthesis of GMP from XMP
NZD89_22400	COG0129	dihydroxy-acid dehydratase activity
NZD89_22415	COG0277	FAD linked oxidase domain protein
NZD89_22420	COG1024	Enoyl-CoA hydratase
NZD89_22425	COG1250	3-hydroxyacyl-CoA dehydrogenase
NZD89_22430	COG0318	PFAM AMP-dependent synthetase and ligase
NZD89_22435	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_22475	COG4191	Histidine kinase
NZD89_22480	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NZD89_22485	COG0656	L-ascorbic acid biosynthetic process
NZD89_22495	COG1252	NADH dehydrogenase
NZD89_22500	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
NZD89_22525	COG1846	Transcriptional regulator
NZD89_22530	COG0492	ferredoxin-NADP+ reductase activity
NZD89_22540	COG2814	Major facilitator Superfamily
NZD89_22560	COG1924	4 iron, 4 sulfur cluster binding
NZD89_22605	COG4974	Belongs to the 'phage' integrase family
NZD89_22620	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_22660	COG0346	lactoylglutathione lyase activity
NZD89_22665	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
NZD89_22670	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NZD89_22720	COG3385	transposase activity
NZD89_22725	COG0024	Methionine aminopeptidase
NZD89_22730	COG0242	peptide deformylase activity
NZD89_22740	COG0402	S-adenosylhomocysteine deaminase activity
NZD89_22755	COG3239	Fatty acid desaturase
NZD89_22760	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NZD89_22775	COG3385	transposase activity
NZD89_22790	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_22825	COG1484	DNA-dependent DNA replication
NZD89_22840	COG1388	LysM domain
NZD89_22840	COG3858	chitin binding
NZD89_22845	COG1136	(ABC) transporter
NZD89_22845	COG0577	efflux transmembrane transporter activity
NZD89_22850	COG1136	(ABC) transporter
NZD89_22885	COG1741	Belongs to the pirin family
NZD89_22900	COG3383	formate dehydrogenase (NAD+) activity
NZD89_22925	COG0667	Aldo Keto reductase
NZD89_22930	COG2226	methyltransferase
NZD89_22940	COG0800	Aldolase
NZD89_22945	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
NZD89_22975	COG0542	response to heat
NZD89_22985	COG0395	ABC-type sugar transport system, permease component
NZD89_22990	COG1175	transmembrane transport
NZD89_23000	COG0656	L-ascorbic acid biosynthetic process
NZD89_23015	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
NZD89_23025	COG0617	tRNA 3'-terminal CCA addition
NZD89_23040	COG2096	Adenosyltransferase
NZD89_23045	COG1492	cobalamin metabolic process
NZD89_23055	COG1309	transcriptional regulator
NZD89_23085	COG3383	formate dehydrogenase (NAD+) activity
NZD89_23090	COG2116	formate transmembrane transporter activity
NZD89_23095	COG5609	conserved protein (DUF2294)
NZD89_23105	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
NZD89_23115	COG2814	Major facilitator Superfamily
NZD89_23130	COG1609	Transcriptional regulator
NZD89_23145	COG1846	Transcriptional regulator
NZD89_23160	COG0463	Glycosyl transferase, family 2
NZD89_23170	COG5002	protein histidine kinase activity
NZD89_23195	COG0363	glucosamine-6-phosphate deaminase activity
NZD89_23200	COG1349	DNA-binding transcription factor activity
NZD89_23205	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NZD89_23210	COG2190	(PTS) system
NZD89_23215	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NZD89_23220	COG1263	PTS System
NZD89_23220	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NZD89_23225	COG1263	PTS System
NZD89_23225	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NZD89_23230	COG3711	transcriptional antiterminator
NZD89_23240	COG1346	cytolysis
NZD89_23245	COG1380	Effector of murein hydrolase LrgA
NZD89_23250	COG0583	DNA-binding transcription factor activity
NZD89_23255	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NZD89_23260	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NZD89_23265	COG0747	negative chemotaxis
NZD89_23270	COG1473	amidohydrolase
NZD89_23275	COG0583	DNA-binding transcription factor activity
NZD89_23280	COG2860	membrane
NZD89_23300	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
NZD89_23315	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
NZD89_23325	COG3290	protein histidine kinase activity
NZD89_23325	COG3829	transcription factor binding
NZD89_23330	COG0735	belongs to the Fur family
NZD89_23335	COG0427	acetyl-CoA hydrolase
NZD89_23345	COG0800	Aldolase
NZD89_23355	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
NZD89_23360	COG4948	Mandelate Racemase Muconate Lactonizing
NZD89_23365	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NZD89_23380	COG1414	Transcriptional regulator
NZD89_23400	COG0667	Aldo Keto reductase
NZD89_23410	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
NZD89_23420	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
NZD89_23425	COG0804	urea catabolic process
NZD89_23430	COG0832	Belongs to the urease beta subunit family
NZD89_23430	COG0831	urea catabolic process
NZD89_23440	COG1335	isochorismatase
NZD89_23455	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NZD89_23470	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
NZD89_23480	COG2271	Major facilitator Superfamily
NZD89_23485	COG4191	Histidine kinase
NZD89_23490	COG0537	adenosine 5'-monophosphoramidase activity
NZD89_23500	COG0673	inositol 2-dehydrogenase activity
NZD89_23510	COG0154	amidase activity
NZD89_23520	COG0154	amidase activity
NZD89_23530	COG0346	lactoylglutathione lyase activity
NZD89_23535	COG0833	amino acid
NZD89_23540	COG3829	transcription factor binding
NZD89_23545	COG1012	belongs to the aldehyde dehydrogenase family
NZD89_23550	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NZD89_23555	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NZD89_23565	COG3706	GGDEF domain
NZD89_23575	COG1819	glycosyl
NZD89_23580	COG5278	phosphoserine phosphatase activity
NZD89_23580	COG0840	transmembrane signaling receptor activity
NZD89_23590	COG2169	Transcriptional regulator
NZD89_23595	COG0697	spore germination
NZD89_23610	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NZD89_23635	COG1069	ribulokinase activity
NZD89_23640	COG2814	Major facilitator Superfamily
NZD89_23650	COG2376	Dihydroxyacetone kinase
NZD89_23655	COG0698	ribose 5-phosphate isomerase
NZD89_23665	COG1063	alcohol dehydrogenase
NZD89_23670	COG1349	DNA-binding transcription factor activity
NZD89_23675	COG2814	Major facilitator Superfamily
NZD89_23685	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
NZD89_23690	COG3457	Alanine racemase
NZD89_23700	COG0626	cystathionine gamma-synthase activity
NZD89_23705	COG1735	metal-dependent hydrolase with the TIM-barrel fold
NZD89_23725	COG2188	Transcriptional regulator
NZD89_23730	COG0561	phosphatase activity
NZD89_23735	COG0824	Thioesterase
NZD89_23745	COG2205	protein histidine kinase activity
NZD89_23750	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
NZD89_23755	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
NZD89_23760	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
NZD89_23765	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
NZD89_23775	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
NZD89_23780	COG2205	protein histidine kinase activity
NZD89_23785	COG0745	RESPONSE REGULATOR receiver
NZD89_23790	COG0626	cystathionine gamma-synthase activity
NZD89_23805	COG0726	polysaccharide deacetylase
NZD89_23805	COG1649	PFAM Uncharacterised BCR, COG1649
NZD89_23835	COG3858	chitin binding
NZD89_23835	COG1388	LysM domain
NZD89_23850	COG0697	spore germination
NZD89_23855	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NZD89_23885	COG0531	amino acid
NZD89_23890	COG0708	Exodeoxyribonuclease III
NZD89_23895	COG1904	glucuronate isomerase
NZD89_23900	COG0800	Aldolase
NZD89_23905	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NZD89_23910	COG0246	Mannitol dehydrogenase
NZD89_23915	COG2721	sulfolactate sulfo-lyase activity
NZD89_23920	COG2814	Major facilitator Superfamily
NZD89_23925	COG1609	Transcriptional regulator
NZD89_23930	COG0385	Bile acid
NZD89_23940	COG1309	transcriptional regulator
NZD89_23945	COG2814	Major facilitator Superfamily
NZD89_23965	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
NZD89_23970	COG2186	Transcriptional regulator
NZD89_23980	COG2814	Major facilitator Superfamily
NZD89_23985	COG0730	response to heat
NZD89_23990	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_24000	COG2271	Major facilitator Superfamily
NZD89_24005	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_24010	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NZD89_24015	COG0508	dehydrogenase complex catalyzes the overall conversion of
NZD89_24020	COG0022	dehydrogenase e1 component
NZD89_24025	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
NZD89_24030	COG1414	Transcriptional regulator
NZD89_24045	COG0395	ABC-type sugar transport system, permease component
NZD89_24050	COG1175	transmembrane transport
NZD89_24055	COG1609	Transcriptional regulator
NZD89_24075	COG1940	carbohydrate kinase activity
NZD89_24085	COG1609	Transcriptional regulator
NZD89_24090	COG4608	Belongs to the ABC transporter superfamily
NZD89_24095	COG0444	Belongs to the ABC transporter superfamily
NZD89_24100	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NZD89_24105	COG0601	transmembrane transport
NZD89_24115	COG4166	transmembrane transport
NZD89_24120	COG0383	alpha-mannosidase activity
NZD89_24140	COG2271	Major facilitator Superfamily
NZD89_24145	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NZD89_24150	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
NZD89_24170	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
NZD89_24200	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_24235	COG5002	protein histidine kinase activity
NZD89_24240	COG3693	PFAM glycoside hydrolase, family 10
NZD89_24245	COG1132	(ABC) transporter
NZD89_24250	COG1132	(ABC) transporter
NZD89_24305	COG0726	polysaccharide deacetylase
NZD89_24310	COG3239	Fatty acid desaturase
NZD89_24325	COG0494	nUDIX hydrolase
NZD89_24340	COG1247	-acetyltransferase
NZD89_24350	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NZD89_24420	COG0586	Pfam SNARE associated Golgi protein
NZD89_24425	COG1077	Cell shape determining protein MreB Mrl
NZD89_24435	COG2814	Major facilitator Superfamily
NZD89_24440	COG2814	Major facilitator Superfamily
NZD89_24440	COG0477	Major facilitator Superfamily
NZD89_24455	COG1053	succinate dehydrogenase
NZD89_24465	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NZD89_24490	COG0366	Alpha amylase catalytic
NZD89_24505	COG3459	Glycosyltransferase 36 associated
NZD89_24510	COG4608	Belongs to the ABC transporter superfamily
NZD89_24550	COG1609	Transcriptional regulator
NZD89_24595	COG0791	NLP P60 protein
NZD89_24620	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NZD89_24660	COG3385	transposase activity
NZD89_24675	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_24685	COG2423	ornithine cyclodeaminase activity
NZD89_24705	COG0667	Aldo Keto reductase
NZD89_24715	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NZD89_24720	COG2814	Major facilitator Superfamily
NZD89_24725	COG0667	Aldo Keto reductase
NZD89_24735	COG1309	transcriptional regulator
NZD89_24755	COG0697	spore germination
NZD89_24780	COG0251	oxidation-reduction process
NZD89_24785	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
NZD89_24810	COG3385	transposase activity
NZD89_24845	COG2124	cytochrome p450
NZD89_24850	COG0367	asparagine synthase
NZD89_24860	COG2124	cytochrome p450
NZD89_24865	COG1063	alcohol dehydrogenase
NZD89_24870	COG0395	ABC-type sugar transport system, permease component
NZD89_24875	COG1175	transmembrane transport
NZD89_24910	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_24925	COG1673	EVE domain
NZD89_24945	COG1247	-acetyltransferase
NZD89_24985	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
NZD89_24990	COG0557	exoribonuclease II activity
NZD89_24995	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
NZD89_25000	COG0148	phosphopyruvate hydratase activity
NZD89_25005	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NZD89_25010	COG0149	triose-phosphate isomerase activity
NZD89_25015	COG0126	phosphoglycerate kinase activity
NZD89_25025	COG3852	Histidine kinase
NZD89_25030	COG1164	Oligoendopeptidase f
NZD89_25055	COG5577	PFAM Coat F domain
NZD89_25065	COG2155	Conserved Protein
NZD89_25085	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NZD89_25105	COG0596	Alpha beta hydrolase
NZD89_25110	COG0281	malic enzyme
NZD89_25115	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
NZD89_25120	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
NZD89_25125	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
NZD89_25130	COG2201	protein-glutamate methylesterase activity
NZD89_25140	COG2217	Heavy metal translocating P-type atpase
NZD89_25150	COG2814	Major facilitator Superfamily
NZD89_25155	COG0789	Transcriptional regulator
NZD89_25160	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NZD89_25170	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NZD89_25180	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NZD89_25195	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NZD89_25200	COG0210	DNA helicase
NZD89_25225	COG0673	inositol 2-dehydrogenase activity
NZD89_25235	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
NZD89_25245	COG1737	Transcriptional regulator
NZD89_25265	COG0444	Belongs to the ABC transporter superfamily
NZD89_25270	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NZD89_25275	COG0601	transmembrane transport
NZD89_25280	COG4166	transmembrane transport
NZD89_25285	COG1649	PFAM Uncharacterised BCR, COG1649
NZD89_25285	COG0726	polysaccharide deacetylase
NZD89_25305	COG1285	pathogenesis
NZD89_25310	COG0584	glycerophosphoryl diester phosphodiesterase
NZD89_25315	COG0395	ABC-type sugar transport system, permease component
NZD89_25320	COG1175	transmembrane transport
NZD89_25340	COG1376	ErfK ybiS ycfS ynhG family protein
NZD89_25345	COG2124	cytochrome p450
NZD89_25365	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_25370	COG1454	alcohol dehydrogenase
NZD89_25375	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NZD89_25385	COG0667	Aldo Keto reductase
NZD89_25400	COG4122	O-methyltransferase activity
NZD89_25405	COG1132	(ABC) transporter
NZD89_25410	COG1132	(ABC) transporter
NZD89_25415	COG1686	Belongs to the peptidase S11 family
NZD89_25420	COG1612	heme a metabolic process
NZD89_25425	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
NZD89_25430	COG1845	cytochrome c oxidase, subunit III
NZD89_25435	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
NZD89_25450	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
NZD89_25465	COG3263	regulation of cellular component size
NZD89_25475	COG2814	Major facilitator Superfamily
NZD89_25480	COG1234	tRNA 3'-trailer cleavage
NZD89_25485	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NZD89_25490	COG0338	D12 class N6 adenine-specific DNA methyltransferase
NZD89_25505	COG1827	regulation of RNA biosynthetic process
NZD89_25515	COG2719	SpoVR family
NZD89_25520	COG2718	Belongs to the UPF0229 family
NZD89_25525	COG2766	serine protein kinase
NZD89_25530	COG2814	Major facilitator Superfamily
NZD89_25575	COG1414	Transcriptional regulator
NZD89_25580	COG0473	3-isopropylmalate dehydrogenase activity
NZD89_25590	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NZD89_25595	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
NZD89_25600	COG0328	RNA-DNA hybrid ribonuclease activity
NZD89_25615	COG0697	spore germination
NZD89_25625	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NZD89_25635	COG4493	Belongs to the UPF0637 family
NZD89_25640	COG3359	exonuclease
NZD89_25645	COG1111	helicase
NZD89_25645	COG1205	dead DEAH box helicase
NZD89_25660	COG0628	permease
NZD89_25675	COG2186	Transcriptional regulator
NZD89_25685	COG0670	Belongs to the BI1 family
NZD89_25690	COG1194	a g-specific adenine glycosylase
NZD89_25710	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NZD89_25715	COG1481	regulation of sporulation
NZD89_25720	COG0391	Required for morphogenesis under gluconeogenic growth conditions
NZD89_25725	COG1660	Displays ATPase and GTPase activities
NZD89_25730	COG1051	belongs to the nudix hydrolase family
NZD89_25735	COG0457	Tetratricopeptide repeat
NZD89_25740	COG0018	arginyl-trna synthetase
NZD89_25750	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
NZD89_25755	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NZD89_25760	COG0556	nucleotide-excision repair
NZD89_25770	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
NZD89_25780	COG2177	Part of the ABC transporter FtsEX involved in
NZD89_25785	COG2884	Cell division ATP-binding protein ftsE
NZD89_25790	COG4948	Mandelate Racemase Muconate Lactonizing
NZD89_25795	COG2814	Major facilitator Superfamily
NZD89_25805	COG1587	Uroporphyrinogen-III synthase
NZD89_25930	COG0673	inositol 2-dehydrogenase activity
NZD89_25935	COG1609	Transcriptional regulator
NZD89_25940	COG2271	Major facilitator Superfamily
NZD89_25950	COG4638	Rieske (2fe-2S)
NZD89_25955	COG0235	Class ii aldolase
NZD89_25960	COG0583	DNA-binding transcription factor activity
NZD89_25970	COG1268	BioY protein
NZD89_25975	COG1122	ATPase activity
NZD89_25990	COG0175	sulfate reduction
NZD89_25995	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NZD89_26000	COG0436	Aminotransferase
NZD89_26005	COG2223	nitrite transmembrane transporter activity
NZD89_26010	COG2233	PERMEase
NZD89_26020	COG1968	undecaprenyl-diphosphatase activity
NZD89_26025	COG2318	DinB family
NZD89_26030	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NZD89_26055	COG0151	Belongs to the GarS family
NZD89_26060	COG0138	bifunctional purine biosynthesis protein purh
NZD89_26065	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
NZD89_26070	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NZD89_26075	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NZD89_26085	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NZD89_26095	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NZD89_26100	COG2252	PERMEase
NZD89_26105	COG0519	Catalyzes the synthesis of GMP from XMP
NZD89_26105	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NZD89_26110	COG1305	Transglutaminase-like
NZD89_26120	COG0714	Associated with various cellular activities
NZD89_26125	COG1376	ErfK ybiS ycfS ynhG family protein
NZD89_26145	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NZD89_26150	COG1543	Belongs to the glycosyl hydrolase 57 family
NZD89_26160	COG0459	protein refolding
NZD89_26185	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NZD89_26190	COG0671	phosphoesterase, PA-phosphatase related
NZD89_26195	COG0488	(ABC) transporter
NZD89_26200	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NZD89_26205	COG0456	acetyltransferase
NZD89_26215	COG0802	atpase or kinase
NZD89_26220	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
NZD89_26245	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
NZD89_26250	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
NZD89_26255	COG2337	Toxic component of a toxin-antitoxin (TA) module
NZD89_26265	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NZD89_26270	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
NZD89_26275	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NZD89_26275	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
NZD89_26280	COG0736	holo-[acyl-carrier-protein] synthase activity
NZD89_26300	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
NZD89_26310	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NZD89_26320	COG1744	ABC transporter substrate-binding protein PnrA-like
NZD89_26325	COG3845	ABC transporter
NZD89_26330	COG4603	Belongs to the binding-protein-dependent transport system permease family
NZD89_26335	COG1079	Belongs to the binding-protein-dependent transport system permease family
NZD89_26345	COG1335	isochorismatase
NZD89_26350	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NZD89_26360	COG4846	Membrane protein involved in cytochrome C biogenesis
NZD89_26365	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_26385	COG5002	protein histidine kinase activity
NZD89_26390	COG1192	Involved in chromosome partitioning
NZD89_26400	COG0546	phosphoglycolate phosphatase activity
NZD89_26440	COG1459	type II secretion system
NZD89_26445	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NZD89_26470	COG1285	pathogenesis
NZD89_26495	COG5002	protein histidine kinase activity
NZD89_26500	COG0659	secondary active sulfate transmembrane transporter activity
NZD89_26505	COG0667	Aldo Keto reductase
NZD89_26520	COG0564	pseudouridine synthase activity
NZD89_26535	COG0463	Glycosyl transferase, family 2
NZD89_26540	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NZD89_26555	COG2814	Major facilitator Superfamily
NZD89_26580	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
NZD89_26585	COG3501	Rhs element vgr protein
NZD89_26585	COG3409	Peptidoglycan-binding domain 1 protein
NZD89_26590	COG3858	chitin binding
NZD89_26600	COG2271	Major facilitator Superfamily
NZD89_26610	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NZD89_26615	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NZD89_26620	COG0765	amino acid transport
NZD89_26625	COG1126	abc transporter atp-binding protein
NZD89_26685	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NZD89_26685	COG1648	precorrin-2 dehydrogenase activity
NZD89_26695	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NZD89_26700	COG0352	thiamine-phosphate diphosphorylase activity
NZD89_26705	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NZD89_26715	COG2022	thiamine diphosphate biosynthetic process
NZD89_26720	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
NZD89_26725	COG4721	ABC-type cobalt transport system, permease component
NZD89_26730	COG0531	amino acid
NZD89_26740	COG1295	ribonuclease BN
NZD89_26760	COG2207	Transcriptional regulator
NZD89_26765	COG0673	inositol 2-dehydrogenase activity
NZD89_26805	COG0577	efflux transmembrane transporter activity
NZD89_26805	COG1136	(ABC) transporter
NZD89_26810	COG0577	efflux transmembrane transporter activity
NZD89_26810	COG1136	(ABC) transporter
NZD89_26825	COG2246	polysaccharide biosynthetic process
NZD89_26830	COG0463	Glycosyl transferase, family 2
NZD89_26835	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NZD89_26855	COG2271	Major facilitator Superfamily
NZD89_26865	COG2271	Major facilitator Superfamily
NZD89_26870	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NZD89_26880	COG2376	Dihydroxyacetone kinase
NZD89_26885	COG2376	Dihydroxyacetone kinase
NZD89_26890	COG2186	Transcriptional regulator
NZD89_26895	COG2271	Major facilitator Superfamily
NZD89_26915	COG2814	Major facilitator Superfamily
NZD89_26925	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_26945	COG1028	Short-chain dehydrogenase reductase Sdr
NZD89_26950	COG1063	alcohol dehydrogenase
NZD89_26995	COG4974	Belongs to the 'phage' integrase family
NZD89_27015	COG1674	ftsk spoiiie
NZD89_27030	COG4974	Belongs to the 'phage' integrase family
NZD89_27050	COG1674	ftsk spoiiie
NZD89_27060	COG1739	Uncharacterized protein family UPF0029
NZD89_27085	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
NZD89_27090	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NZD89_27095	COG4786	Flagellar basal body rod
NZD89_27100	COG4786	Flagellar basal body rod
NZD89_27105	COG1077	Cell shape determining protein MreB Mrl
NZD89_27110	COG1609	Transcriptional regulator
NZD89_27115	COG0739	heme binding
NZD89_27125	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NZD89_27145	COG0355	proton-transporting ATP synthase activity, rotational mechanism
NZD89_27150	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NZD89_27155	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NZD89_27160	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NZD89_27165	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NZD89_27170	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NZD89_27175	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NZD89_27180	COG0356	it plays a direct role in the translocation of protons across the membrane
NZD89_27195	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
NZD89_27215	COG4475	Protein of unknown function (DUF436)
NZD89_27225	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NZD89_27240	COG0791	NLP P60 protein
NZD89_27260	COG1703	isobutyryl-CoA mutase activity
NZD89_27260	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
NZD89_27260	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
NZD89_27265	COG1309	transcriptional regulator
NZD89_27270	COG0009	L-threonylcarbamoyladenylate synthase
NZD89_27280	COG2890	protein-(glutamine-N5) methyltransferase activity
NZD89_27285	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NZD89_27300	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
NZD89_27310	COG2204	response regulator
NZD89_27315	COG0504	CTP synthase activity
NZD89_27320	COG3343	RNA polymerase activity
NZD89_27330	COG1960	acyl-CoA dehydrogenase activity
NZD89_27335	COG1960	acyl-CoA dehydrogenase activity
NZD89_27340	COG1024	Enoyl-CoA hydratase
NZD89_27345	COG1250	3-hydroxyacyl-CoA dehydrogenase
NZD89_27350	COG0183	Belongs to the thiolase family
NZD89_27355	COG0247	lactate metabolic process
NZD89_27355	COG2181	nitrate reductase activity
NZD89_27360	COG0463	Glycosyl transferase, family 2
NZD89_27360	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
NZD89_27380	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
NZD89_27385	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NZD89_27390	COG0436	Aminotransferase
NZD89_27420	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NZD89_27425	COG4187	Peptidase family M20/M25/M40
NZD89_27430	COG1803	Methylglyoxal synthase
NZD89_27435	COG0006	proline dipeptidase activity
NZD89_27440	COG2271	Major facilitator Superfamily
NZD89_27445	COG1070	Carbohydrate kinase
NZD89_27450	COG1609	Transcriptional regulator
NZD89_27455	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
NZD89_27460	COG0572	uridine kinase
NZD89_27465	COG0813	purine-nucleoside phosphorylase activity
NZD89_27470	COG2171	N-acyltransferase activity
NZD89_27475	COG1473	amidohydrolase
NZD89_27480	COG0436	Aminotransferase
NZD89_27485	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NZD89_27505	COG0390	transport system, permease component
NZD89_27510	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
NZD89_27515	COG2130	NADP-dependent
NZD89_27520	COG0004	ammonium transporteR
NZD89_27525	COG0347	Belongs to the P(II) protein family
NZD89_27535	COG0471	metal ion transport
NZD89_27535	COG3273	potassium ion transport
NZD89_27550	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
NZD89_27575	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
NZD89_27575	COG1796	DNA polymerase
NZD89_27590	COG0740	serine-type endopeptidase activity
NZD89_27605	COG0488	(ABC) transporter
NZD89_27610	COG2309	aminopeptidase activity
NZD89_27625	COG2814	Major facilitator Superfamily
NZD89_27630	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NZD89_27640	COG0477	Major facilitator Superfamily
NZD89_27650	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NZD89_27670	COG5002	protein histidine kinase activity
NZD89_27685	COG0305	Participates in initiation and elongation during chromosome replication
NZD89_27690	COG0359	binds to the 23S rRNA
NZD89_27705	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NZD89_27710	COG0629	single-stranded DNA binding
NZD89_27715	COG0360	Binds together with S18 to 16S ribosomal RNA
NZD89_27720	COG0012	GTP binding
NZD89_27725	COG0243	molybdopterin cofactor binding
NZD89_27730	COG4481	Protein conserved in bacteria
NZD89_27735	COG0668	transmembrane transport
NZD89_27755	COG1811	Na channel or pump
NZD89_27760	COG1475	DNA binding
NZD89_27765	COG1192	Involved in chromosome partitioning
NZD89_27770	COG1475	DNA binding
NZD89_27775	COG0357	Ribosomal RNA small subunit methyltransferase G
NZD89_27780	COG0445	tRNA wobble uridine modification
NZD89_27785	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
NZD89_27790	COG1847	R3H domain protein
NZD89_27795	COG0706	membrane insertase activity
NZD89_27800	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
NZD89_27810	COG0230	Belongs to the bacterial ribosomal protein bL34 family
NZD89_27815	COG0582	viral genome integration into host DNA
NZD89_27825	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NZD89_27840	COG1424	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
NZD89_27880	COG0745	RESPONSE REGULATOR receiver
NZD89_27935	COG1793	dna ligase
NZD89_27995	COG4133	protoheme IX ABC transporter activity
NZD89_28065	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NZD89_28065	COG0551	DNA topoisomerase type I activity
NZD89_28125	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_28140	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NZD89_28195	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_28235	COG1914	H( )-stimulated, divalent metal cation uptake system
NZD89_28240	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_28245	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_28250	COG0179	Fumarylacetoacetate (FAA) hydrolase
NZD89_28255	COG0583	DNA-binding transcription factor activity
NZD89_28260	COG0840	transmembrane signaling receptor activity
NZD89_28265	COG2814	Major facilitator Superfamily
NZD89_28295	COG0492	ferredoxin-NADP+ reductase activity
NZD89_28315	COG0745	RESPONSE REGULATOR receiver
NZD89_28320	COG5002	protein histidine kinase activity
NZD89_28330	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_28355	COG0582	viral genome integration into host DNA
NZD89_28365	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NZD89_28380	COG1424	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
NZD89_28400	COG1250	3-hydroxyacyl-CoA dehydrogenase
NZD89_28405	COG2271	Major facilitator Superfamily
NZD89_28420	COG0698	ribose 5-phosphate isomerase
NZD89_28425	COG2376	Dihydroxyacetone kinase
NZD89_28430	COG1461	Dihydroxyacetone kinase
NZD89_28435	COG0149	triose-phosphate isomerase activity
NZD89_28440	COG1349	DNA-binding transcription factor activity
NZD89_28455	COG0582	viral genome integration into host DNA
NZD89_28470	COG0653	protein targeting
NZD89_28500	COG3655	Transcriptional regulator
NZD89_28590	COG1309	transcriptional regulator
NZD89_28605	COG3620	sequence-specific DNA binding
NZD89_28640	COG1192	Involved in chromosome partitioning
NZD89_28685	COG0776	regulation of translation
NZD89_28715	COG1461	Dihydroxyacetone kinase
NZD89_28720	COG0149	triose-phosphate isomerase activity
NZD89_28725	COG1349	DNA-binding transcription factor activity
NZD89_28730	COG1349	DNA-binding transcription factor activity
NZD89_28735	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NZD89_28750	COG0601	transmembrane transport
NZD89_28755	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NZD89_28760	COG0444	Belongs to the ABC transporter superfamily
NZD89_28765	COG4608	Belongs to the ABC transporter superfamily
NZD89_28770	COG4166	transmembrane transport
NZD89_28775	COG0823	Involved in the tonB-independent uptake of proteins
NZD89_28775	COG1506	peptidase
NZD89_28775	COG4946	Tricorn protease homolog
NZD89_28780	COG2362	D-Aminopeptidase
NZD89_28850	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
NZD89_28860	COG0582	viral genome integration into host DNA
NZD89_29010	COG1215	transferase activity, transferring glycosyl groups
NZD89_29025	COG0667	Aldo Keto reductase
NZD89_29030	COG0582	viral genome integration into host DNA
NZD89_29090	COG3547	Transposase (IS116 IS110 IS902 family)
NZD89_29170	COG3344	reverse transcriptase