locus-tag class description FY534_00005 PF00308 Bacterial dnaA protein FY534_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY534_00005 PF11638 DnaA N-terminal domain FY534_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain FY534_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain FY534_00010 PF02767 DNA polymerase III beta subunit, central domain FY534_00020 PF02463 RecF/RecN/SMC N terminal domain FY534_00025 PF04025 Domain of unknown function (DUF370) FY534_00030 PF00204 DNA gyrase B FY534_00030 PF00986 DNA gyrase B subunit, carboxyl terminus FY534_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_00030 PF01751 Toprim domain FY534_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller FY534_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A FY534_00055 PF00571 CBS domain FY534_00055 PF00478 IMP dehydrogenase / GMP reductase domain FY534_00060 PF01680 SOR/SNZ family FY534_00065 PF01174 SNO glutamine amidotransferase family FY534_00070 PF02403 Seryl-tRNA synthetase N-terminal domain FY534_00070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY534_00085 PF14659 Phage integrase, N-terminal SAM-like domain FY534_00085 PF00589 Phage integrase family FY534_00115 PF00145 C-5 cytosine-specific DNA methylase FY534_00125 PF02151 UvrB/uvrC motif FY534_00125 PF12344 Ultra-violet resistance protein B FY534_00125 PF04851 Type III restriction enzyme, res subunit FY534_00125 PF17757 UvrB interaction domain FY534_00125 PF00271 Helicase conserved C-terminal domain FY534_00135 PF03852 DNA mismatch endonuclease Vsr FY534_00145 PF01844 HNH endonuclease FY534_00155 PF00361 Proton-conducting membrane transporter FY534_00160 PF00146 NADH dehydrogenase FY534_00170 PF00361 Proton-conducting membrane transporter FY534_00170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY534_00175 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY534_00175 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY534_00175 PF00374 Nickel-dependent hydrogenase FY534_00185 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY534_00200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY534_00200 PF03466 LysR substrate binding domain FY534_00215 PF00561 alpha/beta hydrolase fold FY534_00225 PF07690 Major Facilitator Superfamily FY534_00230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY534_00230 PF02770 Acyl-CoA dehydrogenase, middle domain FY534_00230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY534_00235 PF00108 Thiolase, N-terminal domain FY534_00235 PF02803 Thiolase, C-terminal domain FY534_00245 PF12146 Serine aminopeptidase, S33 FY534_00250 PF01546 Peptidase family M20/M25/M40 FY534_00255 PF00248 Aldo/keto reductase family FY534_00265 PF02627 Carboxymuconolactone decarboxylase family FY534_00275 PF00561 alpha/beta hydrolase fold FY534_00280 PF00067 Cytochrome P450 FY534_00285 PF00342 Phosphoglucose isomerase FY534_00290 PF00480 ROK family FY534_00295 PF03698 Uncharacterised protein family (UPF0180) FY534_00305 PF10672 S-adenosylmethionine-dependent methyltransferase FY534_00305 PF17785 PUA-like domain FY534_00325 PF01475 Ferric uptake regulator family FY534_00335 PF00005 ABC transporter FY534_00340 PF00950 ABC 3 transport family FY534_00345 PF00950 ABC 3 transport family FY534_00350 PF03079 ARD/ARD' family FY534_00360 PF00528 Binding-protein-dependent transport system inner membrane component FY534_00365 PF00528 Binding-protein-dependent transport system inner membrane component FY534_00370 PF02837 Glycosyl hydrolases family 2, sugar binding domain FY534_00370 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FY534_00370 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 FY534_00370 PF16355 Domain of unknown function (DUF4982) FY534_00370 PF00703 Glycosyl hydrolases family 2 FY534_00375 PF01266 FAD dependent oxidoreductase FY534_00375 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY534_00380 PF07859 alpha/beta hydrolase fold FY534_00385 PF04309 Glycerol-3-phosphate responsive antiterminator FY534_00390 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain FY534_00390 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain FY534_00400 PF00596 Class II Aldolase and Adducin N-terminal domain FY534_00405 PF00733 Asparagine synthase FY534_00405 PF13537 Glutamine amidotransferase domain FY534_00420 PF14437 MafB19-like deaminase FY534_00450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_00450 PF00989 PAS fold FY534_00450 PF00512 His Kinase A (phospho-acceptor) domain FY534_00455 PF12169 DNA polymerase III subunits gamma and tau domain III FY534_00460 PF02575 YbaB/EbfC DNA-binding family FY534_00465 PF02132 RecR protein FY534_00465 PF13662 Toprim domain FY534_00475 PF07441 SigmaK-factor processing regulatory protein BofA FY534_00480 PF14667 Polysaccharide biosynthesis C-terminal domain FY534_00480 PF01943 Polysaccharide biosynthesis protein FY534_00490 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FY534_00490 PF01276 Orn/Lys/Arg decarboxylase, major domain FY534_00495 PF02223 Thymidylate kinase FY534_00500 PF06153 Cyclic-di-AMP receptor FY534_00505 PF09115 DNA polymerase III, delta subunit, C terminal FY534_00510 PF04468 PSP1 C-terminal conserved region FY534_00515 PF06156 Initiation control protein YabA FY534_00520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY534_00525 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FY534_00525 PF18277 AbrB C-terminal domain FY534_00540 PF11799 impB/mucB/samB family C-terminal domain FY534_00540 PF00817 impB/mucB/samB family FY534_00555 PF01588 Putative tRNA binding domain FY534_00555 PF09334 tRNA synthetases class I (M) FY534_00555 PF08264 Anticodon-binding domain of tRNA FY534_00560 PF01026 TatD related DNase FY534_00565 PF13331 Domain of unknown function (DUF4093) FY534_00565 PF13662 Toprim domain FY534_00570 PF00398 Ribosomal RNA adenine dimethylase FY534_00580 PF05582 YabG peptidase U57 FY534_00585 PF06257 Biofilm formation stimulator VEG FY534_00590 PF03575 Peptidase family S51 FY534_00595 PF02875 Mur ligase family, glutamate ligase domain FY534_00595 PF08245 Mur ligase middle domain FY534_00595 PF08443 RimK-like ATP-grasp domain FY534_00600 PF00288 GHMP kinases N terminal domain FY534_00600 PF08544 GHMP kinases C terminal FY534_00605 PF09182 Bacterial purine repressor, N-terminal FY534_00605 PF00156 Phosphoribosyl transferase domain FY534_00610 PF01042 Endoribonuclease L-PSP FY534_00615 PF04026 SpoVG FY534_00620 PF00132 Bacterial transferase hexapeptide (six repeats) FY534_00620 PF12804 MobA-like NTP transferase domain FY534_00625 PF14572 Phosphoribosyl synthetase-associated domain FY534_00625 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY534_00630 PF01195 Peptidyl-tRNA hydrolase FY534_00640 PF17757 UvrB interaction domain FY534_00640 PF03461 TRCF domain FY534_00640 PF02559 CarD-like/TRCF domain FY534_00640 PF00271 Helicase conserved C-terminal domain FY534_00640 PF00270 DEAD/DEAH box helicase FY534_00645 PF09312 SurA N-terminal domain FY534_00650 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FY534_00650 PF15714 Stage V sporulation protein T C-terminal, transcription factor FY534_00655 PF01943 Polysaccharide biosynthesis protein FY534_00655 PF14667 Polysaccharide biosynthesis C-terminal domain FY534_00660 PF03819 MazG nucleotide pyrophosphohydrolase domain FY534_00660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY534_00665 PF00216 Bacterial DNA-binding protein FY534_00670 PF01479 S4 domain FY534_00690 PF00575 S1 RNA binding domain FY534_00695 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FY534_00710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY534_00715 PF07228 Stage II sporulation protein E (SpoIIE) FY534_00720 PF00092 von Willebrand factor type A domain FY534_00730 PF09179 TilS substrate binding domain FY534_00730 PF11734 TilS substrate C-terminal domain FY534_00730 PF01171 PP-loop family FY534_00735 PF00156 Phosphoribosyl transferase domain FY534_00740 PF17862 AAA+ lid domain FY534_00740 PF06480 FtsH Extracellular FY534_00740 PF01434 Peptidase family M41 FY534_00740 PF00004 ATPase family associated with various cellular activities (AAA) FY534_00745 PF01430 Hsp33 protein FY534_00750 PF00809 Pterin binding enzyme FY534_00755 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY534_00760 PF01381 Helix-turn-helix FY534_00765 PF01272 Transcription elongation factor, GreA/GreB, C-term FY534_00765 PF03449 Transcription elongation factor, N-terminal FY534_00770 PF00152 tRNA synthetases class II (D, K and N) FY534_00770 PF01336 OB-fold nucleic acid binding domain FY534_00810 PF01568 Molydopterin dinucleotide binding domain FY534_00810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY534_00810 PF00384 Molybdopterin oxidoreductase FY534_00845 PF04239 Protein of unknown function (DUF421) FY534_00850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY534_00850 PF02770 Acyl-CoA dehydrogenase, middle domain FY534_00850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY534_00860 PF07690 Major Facilitator Superfamily FY534_00865 PF01047 MarR family FY534_00870 PF02913 FAD linked oxidases, C-terminal domain FY534_00870 PF01565 FAD binding domain FY534_00875 PF00083 Sugar (and other) transporter FY534_00880 PF03069 Acetamidase/Formamidase family FY534_00890 PF00392 Bacterial regulatory proteins, gntR family FY534_00890 PF07729 FCD domain FY534_00895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY534_00900 PF00528 Binding-protein-dependent transport system inner membrane component FY534_00905 PF00528 Binding-protein-dependent transport system inner membrane component FY534_00905 PF12911 N-terminal TM domain of oligopeptide transport permease C FY534_00915 PF02417 Chromate transporter FY534_00920 PF02417 Chromate transporter FY534_00935 PF00027 Cyclic nucleotide-binding domain FY534_00935 PF13545 Crp-like helix-turn-helix domain FY534_00940 PF02390 Putative methyltransferase FY534_00970 PF13302 Acetyltransferase (GNAT) domain FY534_01000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY534_01000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY534_01025 PF00480 ROK family FY534_01030 PF00480 ROK family FY534_01030 PF01047 MarR family FY534_01035 PF01522 Polysaccharide deacetylase FY534_01045 PF00528 Binding-protein-dependent transport system inner membrane component FY534_01050 PF00528 Binding-protein-dependent transport system inner membrane component FY534_01055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY534_01055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY534_01060 PF14310 Fibronectin type III-like domain FY534_01060 PF00933 Glycosyl hydrolase family 3 N terminal domain FY534_01060 PF01915 Glycosyl hydrolase family 3 C-terminal domain FY534_01075 PF01270 Glycosyl hydrolases family 8 FY534_01085 PF01385 Probable transposase FY534_01085 PF07282 Putative transposase DNA-binding domain FY534_01085 PF12323 Helix-turn-helix domain FY534_01120 PF02769 AIR synthase related protein, C-terminal domain FY534_01120 PF00586 AIR synthase related protein, N-terminal domain FY534_01130 PF00814 Glycoprotease family FY534_01135 PF00583 Acetyltransferase (GNAT) family FY534_01140 PF00814 Glycoprotease family FY534_01175 PF03323 Bacillus/Clostridium GerA spore germination protein FY534_01180 PF16326 ABC transporter C-terminal domain FY534_01180 PF00005 ABC transporter FY534_01180 PF12848 ABC transporter FY534_01185 PF01569 PAP2 superfamily FY534_01195 PF12804 MobA-like NTP transferase domain FY534_01200 PF02464 Competence-damaged protein FY534_01200 PF00994 Probable molybdopterin binding domain FY534_01210 PF00166 Chaperonin 10 Kd subunit FY534_01215 PF00118 TCP-1/cpn60 chaperonin family FY534_01220 PF07726 ATPase family associated with various cellular activities (AAA) FY534_01220 PF17863 AAA lid domain FY534_01230 PF13559 Domain of unknown function (DUF4129) FY534_01230 PF01841 Transglutaminase-like superfamily FY534_01230 PF11992 Domain of unknown function (DUF3488) FY534_01235 PF00117 Glutamine amidotransferase class-I FY534_01235 PF00958 GMP synthase C terminal domain FY534_01235 PF02540 NAD synthase FY534_01245 PF03372 Endonuclease/Exonuclease/phosphatase family FY534_01255 PF00206 Lyase FY534_01255 PF10397 Adenylosuccinate lyase C-terminus FY534_01260 PF01259 SAICAR synthetase FY534_01275 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY534_01275 PF02769 AIR synthase related protein, C-terminal domain FY534_01275 PF00586 AIR synthase related protein, N-terminal domain FY534_01280 PF00156 Phosphoribosyl transferase domain FY534_01285 PF02769 AIR synthase related protein, C-terminal domain FY534_01285 PF00586 AIR synthase related protein, N-terminal domain FY534_01290 PF02142 MGS-like domain FY534_01290 PF01808 AICARFT/IMPCHase bienzyme FY534_01295 PF02844 Phosphoribosylglycinamide synthetase, N domain FY534_01295 PF02843 Phosphoribosylglycinamide synthetase, C domain FY534_01295 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY534_01305 PF00072 Response regulator receiver domain FY534_01305 PF00486 Transcriptional regulatory protein, C terminal FY534_01310 PF00067 Cytochrome P450 FY534_01330 PF17932 Tetracyclin repressor-like, C-terminal domain FY534_01330 PF00440 Bacterial regulatory proteins, tetR family FY534_01335 PF05848 CtsR N-terminal HTH domain FY534_01335 PF17727 CtsR C-terminal dimerization domain FY534_01340 PF02151 UvrB/uvrC motif FY534_01345 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain FY534_01350 PF17871 AAA lid domain FY534_01350 PF07724 AAA domain (Cdc48 subfamily) FY534_01350 PF10431 C-terminal, D2-small domain, of ClpB protein FY534_01350 PF02861 Clp amino terminal domain, pathogenicity island component FY534_01350 PF00004 ATPase family associated with various cellular activities (AAA) FY534_01355 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FY534_01360 PF18073 Rubredoxin metal binding domain FY534_01365 PF10635 DisA bacterial checkpoint controller linker region FY534_01365 PF02457 DisA bacterial checkpoint controller nucleotide-binding FY534_01370 PF01066 CDP-alcohol phosphatidyltransferase FY534_01380 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY534_01385 PF02542 YgbB family FY534_01390 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY534_01395 PF01406 tRNA synthetases class I (C) catalytic domain FY534_01395 PF09190 DALR domain FY534_01400 PF00636 Ribonuclease III domain FY534_01405 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY534_01405 PF00588 SpoU rRNA Methylase family FY534_01415 PF08281 Sigma-70, region 4 FY534_01415 PF04542 Sigma-70 region 2 FY534_01420 PF00471 Ribosomal protein L33 FY534_01425 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY534_01430 PF00467 KOW motif FY534_01430 PF02357 Transcription termination factor nusG FY534_01440 PF03946 Ribosomal protein L11, N-terminal domain FY534_01440 PF00298 Ribosomal protein L11, RNA binding domain FY534_01445 PF00687 Ribosomal protein L1p/L10e family FY534_01450 PF00466 Ribosomal protein L10 FY534_01455 PF16320 Ribosomal protein L7/L12 dimerisation domain FY534_01455 PF00542 Ribosomal protein L7/L12 C-terminal domain FY534_01460 PF05175 Methyltransferase small domain FY534_01465 PF04563 RNA polymerase beta subunit FY534_01465 PF00562 RNA polymerase Rpb2, domain 6 FY534_01465 PF04565 RNA polymerase Rpb2, domain 3 FY534_01465 PF04560 RNA polymerase Rpb2, domain 7 FY534_01465 PF04561 RNA polymerase Rpb2, domain 2 FY534_01465 PF10385 RNA polymerase beta subunit external 1 domain FY534_01470 PF00623 RNA polymerase Rpb1, domain 2 FY534_01470 PF04998 RNA polymerase Rpb1, domain 5 FY534_01470 PF04997 RNA polymerase Rpb1, domain 1 FY534_01470 PF04983 RNA polymerase Rpb1, domain 3 FY534_01470 PF05000 RNA polymerase Rpb1, domain 4 FY534_01480 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family FY534_01485 PF00164 Ribosomal protein S12/S23 FY534_01490 PF00177 Ribosomal protein S7p/S5e FY534_01495 PF03764 Elongation factor G, domain IV FY534_01495 PF00009 Elongation factor Tu GTP binding domain FY534_01495 PF14492 Elongation Factor G, domain II FY534_01495 PF00679 Elongation factor G C-terminus FY534_01495 PF03144 Elongation factor Tu domain 2 FY534_01500 PF03143 Elongation factor Tu C-terminal domain FY534_01500 PF00009 Elongation factor Tu GTP binding domain FY534_01500 PF03144 Elongation factor Tu domain 2 FY534_01505 PF00338 Ribosomal protein S10p/S20e FY534_01510 PF00297 Ribosomal protein L3 FY534_01515 PF00573 Ribosomal protein L4/L1 family FY534_01520 PF00276 Ribosomal protein L23 FY534_01525 PF00181 Ribosomal Proteins L2, RNA binding domain FY534_01525 PF03947 Ribosomal Proteins L2, C-terminal domain FY534_01530 PF00203 Ribosomal protein S19 FY534_01535 PF00237 Ribosomal protein L22p/L17e FY534_01540 PF00189 Ribosomal protein S3, C-terminal domain FY534_01540 PF07650 KH domain FY534_01545 PF00252 Ribosomal protein L16p/L10e FY534_01550 PF00831 Ribosomal L29 protein FY534_01555 PF00366 Ribosomal protein S17 FY534_01560 PF00238 Ribosomal protein L14p/L23e FY534_01565 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY534_01565 PF00467 KOW motif FY534_01570 PF00673 ribosomal L5P family C-terminus FY534_01570 PF00281 Ribosomal protein L5 FY534_01575 PF00253 Ribosomal protein S14p/S29e FY534_01580 PF00410 Ribosomal protein S8 FY534_01585 PF00347 Ribosomal protein L6 FY534_01590 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY534_01595 PF00333 Ribosomal protein S5, N-terminal domain FY534_01595 PF03719 Ribosomal protein S5, C-terminal domain FY534_01600 PF00327 Ribosomal protein L30p/L7e FY534_01605 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY534_01610 PF00344 SecY translocase FY534_01615 PF05191 Adenylate kinase, active site lid FY534_01625 PF01176 Translation initiation factor 1A / IF-1 FY534_01630 PF00444 Ribosomal protein L36 FY534_01635 PF00416 Ribosomal protein S13/S18 FY534_01640 PF00411 Ribosomal protein S11 FY534_01645 PF00163 Ribosomal protein S4/S9 N-terminal domain FY534_01645 PF01479 S4 domain FY534_01650 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY534_01650 PF01000 RNA polymerase Rpb3/RpoA insert domain FY534_01650 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY534_01655 PF01196 Ribosomal protein L17 FY534_01660 PF01416 tRNA pseudouridine synthase FY534_01665 PF00572 Ribosomal protein L13 FY534_01670 PF00380 Ribosomal protein S9/S16 FY534_01675 PF01520 N-acetylmuramoyl-L-alanine amidase FY534_01685 PF10609 NUBPL iron-transfer P-loop NTPase FY534_01705 PF00491 Arginase family FY534_01715 PF02457 DisA bacterial checkpoint controller nucleotide-binding FY534_01725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY534_01725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY534_01725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY534_01725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY534_01730 PF01380 SIS domain FY534_01745 PF00665 Integrase core domain FY534_01750 PF13401 AAA domain FY534_01750 PF11426 Tn7 transposition regulator TnsC FY534_01755 PF15978 Tn7-like transposition protein D FY534_01755 PF06527 TniQ FY534_01770 PF12161 HsdM N-terminal domain FY534_01770 PF02384 N-6 DNA Methylase FY534_01775 PF01420 Type I restriction modification DNA specificity domain FY534_01790 PF03793 PASTA domain FY534_01790 PF00069 Protein kinase domain FY534_01810 PF13026 Protein of unknown function (DUF3887) FY534_01810 PF12146 Serine aminopeptidase, S33 FY534_01815 PF13419 Haloacid dehalogenase-like hydrolase FY534_01825 PF13673 Acetyltransferase (GNAT) domain FY534_01825 PF04229 GrpB protein FY534_01855 PF13243 Squalene-hopene cyclase C-terminal domain FY534_01855 PF13249 Squalene-hopene cyclase N-terminal domain FY534_01870 PF01810 LysE type translocator FY534_01885 PF01547 Bacterial extracellular solute-binding protein FY534_01890 PF00528 Binding-protein-dependent transport system inner membrane component FY534_01890 PF14785 Maltose transport system permease protein MalF P2 domain FY534_01895 PF00528 Binding-protein-dependent transport system inner membrane component FY534_01900 PF00356 Bacterial regulatory proteins, lacI family FY534_01905 PF00128 Alpha amylase, catalytic domain FY534_01905 PF02903 Alpha amylase, N-terminal ig-like domain FY534_01905 PF16657 Maltogenic Amylase, C-terminal domain FY534_01910 PF13802 Galactose mutarotase-like FY534_01910 PF16338 Domain of unknown function (DUF4968) FY534_01910 PF17137 Domain of unknown function (DUF5110) FY534_01910 PF01055 Glycosyl hydrolases family 31 FY534_01915 PF03061 Thioesterase superfamily FY534_01925 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY534_01930 PF08546 Ketopantoate reductase PanE/ApbA C terminal FY534_01930 PF02558 Ketopantoate reductase PanE/ApbA FY534_01945 PF00672 HAMP domain FY534_01945 PF07730 Histidine kinase FY534_01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_01950 PF00196 Bacterial regulatory proteins, luxR family FY534_01950 PF00072 Response regulator receiver domain FY534_01965 PF07690 Major Facilitator Superfamily FY534_01970 PF05163 DinB family FY534_01975 PF02673 Bacitracin resistance protein BacA FY534_01980 PF07690 Major Facilitator Superfamily FY534_01985 PF00155 Aminotransferase class I and II FY534_01995 PF00551 Formyl transferase FY534_02000 PF00324 Amino acid permease FY534_02005 PF01507 Phosphoadenosine phosphosulfate reductase family FY534_02010 PF01747 ATP-sulfurylase FY534_02010 PF14306 PUA-like domain FY534_02015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY534_02015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY534_02020 PF10414 Sirohaem synthase dimerisation region FY534_02020 PF14824 Sirohaem biosynthesis protein central FY534_02020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY534_02030 PF16197 Ketoacyl-synthetase C-terminal extension FY534_02030 PF14765 Polyketide synthase dehydratase FY534_02030 PF00550 Phosphopantetheine attachment site FY534_02030 PF08659 KR domain FY534_02030 PF00698 Acyl transferase domain FY534_02030 PF08240 Alcohol dehydrogenase GroES-like domain FY534_02030 PF00107 Zinc-binding dehydrogenase FY534_02030 PF00109 Beta-ketoacyl synthase, N-terminal domain FY534_02030 PF02801 Beta-ketoacyl synthase, C-terminal domain FY534_02035 PF01329 Pterin 4 alpha carbinolamine dehydratase FY534_02045 PF00005 ABC transporter FY534_02050 PF00005 ABC transporter FY534_02055 PF02632 BioY family FY534_02060 PF00392 Bacterial regulatory proteins, gntR family FY534_02060 PF07729 FCD domain FY534_02065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY534_02080 PF02903 Alpha amylase, N-terminal ig-like domain FY534_02080 PF00128 Alpha amylase, catalytic domain FY534_02085 PF03951 Glutamine synthetase, beta-Grasp domain FY534_02085 PF00120 Glutamine synthetase, catalytic domain FY534_02095 PF00293 NUDIX domain FY534_02095 PF13344 Haloacid dehalogenase-like hydrolase FY534_02100 PF03807 NADP oxidoreductase coenzyme F420-dependent FY534_02100 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY534_02105 PF00994 Probable molybdopterin binding domain FY534_02110 PF01738 Dienelactone hydrolase family FY534_02115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY534_02115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY534_02115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY534_02115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY534_02120 PF07690 Major Facilitator Superfamily FY534_02125 PF00313 'Cold-shock' DNA-binding domain FY534_02135 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY534_02140 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY534_02140 PF02772 S-adenosylmethionine synthetase, central domain FY534_02140 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY534_02165 PF01966 HD domain FY534_02175 PF00486 Transcriptional regulatory protein, C terminal FY534_02175 PF00072 Response regulator receiver domain FY534_02180 PF00989 PAS fold FY534_02180 PF00512 His Kinase A (phospho-acceptor) domain FY534_02180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_02180 PF16736 Single Cache-like FY534_02185 PF02645 Uncharacterised protein, DegV family COG1307 FY534_02190 PF00156 Phosphoribosyl transferase domain FY534_02200 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY534_02200 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY534_02215 PF04545 Sigma-70, region 4 FY534_02215 PF04539 Sigma-70 region 3 FY534_02215 PF04542 Sigma-70 region 2 FY534_02230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY534_02230 PF00460 Flagella basal body rod protein FY534_02240 PF00700 Bacterial flagellin C-terminal helical region FY534_02240 PF00669 Bacterial flagellin N-terminal helical region FY534_02255 PF00535 Glycosyl transferase family 2 FY534_02255 PF13181 Tetratricopeptide repeat FY534_02260 PF00535 Glycosyl transferase family 2 FY534_02265 PF00534 Glycosyl transferases group 1 FY534_02265 PF13439 Glycosyltransferase Family 4 FY534_02275 PF00535 Glycosyl transferase family 2 FY534_02280 PF13181 Tetratricopeptide repeat FY534_02280 PF00535 Glycosyl transferase family 2 FY534_02285 PF01043 SecA preprotein cross-linking domain FY534_02285 PF07517 SecA DEAD-like domain FY534_02285 PF07516 SecA Wing and Scaffold domain FY534_02290 PF03462 PCRF domain FY534_02290 PF00472 RF-1 domain FY534_02320 PF00005 ABC transporter FY534_02325 PF18075 FtsX extracellular domain FY534_02325 PF02687 FtsX-like permease family FY534_02335 PF17820 PDZ domain FY534_02340 PF01618 MotA/TolQ/ExbB proton channel family FY534_02345 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY534_02345 PF00691 OmpA family FY534_02350 PF17757 UvrB interaction domain FY534_02350 PF04851 Type III restriction enzyme, res subunit FY534_02350 PF12344 Ultra-violet resistance protein B FY534_02350 PF00271 Helicase conserved C-terminal domain FY534_02350 PF02151 UvrB/uvrC motif FY534_02355 PF17760 UvrA interaction domain FY534_02355 PF00005 ABC transporter FY534_02355 PF17755 UvrA DNA-binding domain FY534_02360 PF07475 HPr Serine kinase C-terminal domain FY534_02360 PF02603 HPr Serine kinase N terminus FY534_02365 PF05746 DALR anticodon binding domain FY534_02365 PF00750 tRNA synthetases class I (R) FY534_02365 PF03485 Arginyl tRNA synthetase N terminal domain FY534_02375 PF03668 P-loop ATPase protein family FY534_02380 PF01933 Uncharacterised protein family UPF0052 FY534_02385 PF10298 WhiA N-terminal LAGLIDADG-like domain FY534_02385 PF14527 WhiA LAGLIDADG-like domain FY534_02385 PF02650 WhiA C-terminal HTH domain FY534_02395 PF00072 Response regulator receiver domain FY534_02395 PF00196 Bacterial regulatory proteins, luxR family FY534_02410 PF00005 ABC transporter FY534_02420 PF00857 Isochorismatase family FY534_02430 PF14815 NUDIX domain FY534_02430 PF00633 Helix-hairpin-helix motif FY534_02430 PF00730 HhH-GPD superfamily base excision DNA repair protein FY534_02435 PF01027 Inhibitor of apoptosis-promoting Bax1 FY534_02440 PF00133 tRNA synthetases class I (I, L, M and V) FY534_02440 PF13603 Leucyl-tRNA synthetase, Domain 2 FY534_02440 PF09334 tRNA synthetases class I (M) FY534_02440 PF08264 Anticodon-binding domain of tRNA FY534_02445 PF00392 Bacterial regulatory proteins, gntR family FY534_02455 PF01048 Phosphorylase superfamily FY534_02465 PF01594 AI-2E family transporter FY534_02475 PF06335 Protein of unknown function (DUF1054) FY534_02480 PF13193 AMP-binding enzyme C-terminal domain FY534_02480 PF00501 AMP-binding enzyme FY534_02490 PF00633 Helix-hairpin-helix motif FY534_02490 PF00730 HhH-GPD superfamily base excision DNA repair protein FY534_02490 PF10576 Iron-sulfur binding domain of endonuclease III FY534_02500 PF03323 Bacillus/Clostridium GerA spore germination protein FY534_02510 PF00075 RNase H FY534_02515 PF08331 Domain of unknown function (DUF1730) FY534_02530 PF00180 Isocitrate/isopropylmalate dehydrogenase FY534_02540 PF00588 SpoU rRNA Methylase family FY534_02550 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY534_02550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY534_02555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY534_02555 PF00364 Biotin-requiring enzyme FY534_02555 PF02817 e3 binding domain FY534_02560 PF02779 Transketolase, pyrimidine binding domain FY534_02560 PF02780 Transketolase, C-terminal domain FY534_02565 PF00676 Dehydrogenase E1 component FY534_02575 PF08298 PrkA AAA domain FY534_02575 PF06798 PrkA serine protein kinase C-terminal domain FY534_02580 PF04285 Protein of unknown function (DUF444) FY534_02585 PF04293 SpoVR like protein FY534_02595 PF00356 Bacterial regulatory proteins, lacI family FY534_02610 PF00528 Binding-protein-dependent transport system inner membrane component FY534_02615 PF00528 Binding-protein-dependent transport system inner membrane component FY534_02620 PF01614 Bacterial transcriptional regulator FY534_02620 PF09339 IclR helix-turn-helix domain FY534_02625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY534_02625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY534_02625 PF02770 Acyl-CoA dehydrogenase, middle domain FY534_02635 PF01494 FAD binding domain FY534_02640 PF01593 Flavin containing amine oxidoreductase FY534_02645 PF00924 Mechanosensitive ion channel FY534_02645 PF05552 Conserved TM helix FY534_02655 PF00970 Oxidoreductase FAD-binding domain FY534_02655 PF00175 Oxidoreductase NAD-binding domain FY534_02655 PF00042 Globin FY534_02665 PF00296 Luciferase-like monooxygenase FY534_02675 PF00909 Ammonium Transporter Family FY534_02680 PF00120 Glutamine synthetase, catalytic domain FY534_02680 PF03951 Glutamine synthetase, beta-Grasp domain FY534_02690 PF00929 Exonuclease FY534_02690 PF14579 Helix-hairpin-helix motif FY534_02690 PF02811 PHP domain FY534_02690 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY534_02690 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY534_02700 PF07943 Penicillin-binding protein 5, C-terminal domain FY534_02700 PF00768 D-alanyl-D-alanine carboxypeptidase FY534_02705 PF00664 ABC transporter transmembrane region FY534_02705 PF00005 ABC transporter FY534_02710 PF00664 ABC transporter transmembrane region FY534_02710 PF00005 ABC transporter FY534_02745 PF16363 GDP-mannose 4,6 dehydratase FY534_02760 PF02646 RmuC family FY534_02775 PF00580 UvrD/REP helicase N-terminal domain FY534_02775 PF13361 UvrD-like helicase C-terminal domain FY534_02785 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY534_02785 PF12826 Helix-hairpin-helix motif FY534_02785 PF03120 NAD-dependent DNA ligase OB-fold domain FY534_02785 PF00533 BRCA1 C Terminus (BRCT) domain FY534_02785 PF01653 NAD-dependent DNA ligase adenylation domain FY534_02790 PF00953 Glycosyl transferase family 4 FY534_02790 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY534_02795 PF02686 Glu-tRNAGln amidotransferase C subunit FY534_02800 PF01425 Amidase FY534_02805 PF02637 GatB domain FY534_02805 PF02934 GatB/GatE catalytic domain FY534_02810 PF01938 TRAM domain FY534_02810 PF05958 tRNA (Uracil-5-)-methyltransferase FY534_02815 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY534_02820 PF01758 Sodium Bile acid symporter family FY534_02825 PF01022 Bacterial regulatory protein, arsR family FY534_02830 PF00171 Aldehyde dehydrogenase family FY534_02870 PF08671 Anti-repressor SinI FY534_02870 PF01381 Helix-turn-helix FY534_02880 PF13411 MerR HTH family regulatory protein FY534_02885 PF00753 Metallo-beta-lactamase superfamily FY534_02905 PF01261 Xylose isomerase-like TIM barrel FY534_02910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY534_02910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY534_02915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY534_02915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY534_02920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY534_02920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY534_02925 PF01817 Chorismate mutase type II FY534_02925 PF00800 Prephenate dehydratase FY534_02930 PF18152 DAHP synthase ferredoxin-like domain FY534_02930 PF00793 DAHP synthetase I family FY534_02935 PF03746 LamB/YcsF family FY534_02940 PF03707 Bacterial signalling protein N terminal repeat FY534_02940 PF00990 Diguanylate cyclase, GGDEF domain FY534_02940 PF00563 EAL domain FY534_02955 PF02040 Arsenical pump membrane protein FY534_02965 PF00501 AMP-binding enzyme FY534_02965 PF13193 AMP-binding enzyme C-terminal domain FY534_02970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY534_02970 PF02770 Acyl-CoA dehydrogenase, middle domain FY534_02970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY534_02975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY534_02975 PF02770 Acyl-CoA dehydrogenase, middle domain FY534_02975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY534_02980 PF00378 Enoyl-CoA hydratase/isomerase FY534_02990 PF03109 ABC1 family FY534_03000 PF00072 Response regulator receiver domain FY534_03000 PF00196 Bacterial regulatory proteins, luxR family FY534_03005 PF00268 Ribonucleotide reductase, small chain FY534_03020 PF00356 Bacterial regulatory proteins, lacI family FY534_03025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY534_03030 PF00528 Binding-protein-dependent transport system inner membrane component FY534_03035 PF00528 Binding-protein-dependent transport system inner membrane component FY534_03035 PF12911 N-terminal TM domain of oligopeptide transport permease C FY534_03040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY534_03040 PF00005 ABC transporter FY534_03045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY534_03045 PF00005 ABC transporter FY534_03055 PF00232 Glycosyl hydrolase family 1 FY534_03065 PF00067 Cytochrome P450 FY534_03105 PF00072 Response regulator receiver domain FY534_03105 PF00486 Transcriptional regulatory protein, C terminal FY534_03110 PF00512 His Kinase A (phospho-acceptor) domain FY534_03110 PF02702 Osmosensitive K+ channel His kinase sensor domain FY534_03110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_03110 PF13492 GAF domain FY534_03110 PF13493 Domain of unknown function (DUF4118) FY534_03120 PF03814 Potassium-transporting ATPase A subunit FY534_03135 PF02702 Osmosensitive K+ channel His kinase sensor domain FY534_03140 PF13667 ThiC-associated domain FY534_03140 PF01964 Radical SAM ThiC family FY534_03145 PF08281 Sigma-70, region 4 FY534_03145 PF04542 Sigma-70 region 2 FY534_03160 PF01569 PAP2 superfamily FY534_03170 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY534_03175 PF01432 Peptidase family M3 FY534_03175 PF08439 Oligopeptidase F FY534_03180 PF00266 Aminotransferase class-V FY534_03200 PF07690 Major Facilitator Superfamily FY534_03210 PF01565 FAD binding domain FY534_03210 PF08031 Berberine and berberine like FY534_03230 PF00512 His Kinase A (phospho-acceptor) domain FY534_03230 PF08448 PAS fold FY534_03230 PF13188 PAS domain FY534_03230 PF00072 Response regulator receiver domain FY534_03230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_03235 PF00211 Adenylate and Guanylate cyclase catalytic domain FY534_03245 PF02583 Metal-sensitive transcriptional repressor FY534_03250 PF00403 Heavy-metal-associated domain FY534_03255 PF00403 Heavy-metal-associated domain FY534_03260 PF08543 Phosphomethylpyrimidine kinase FY534_03265 PF02581 Thiamine monophosphate synthase FY534_03280 PF00171 Aldehyde dehydrogenase family FY534_03285 PF01914 MarC family integral membrane protein FY534_03295 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY534_03295 PF00391 PEP-utilising enzyme, mobile domain FY534_03300 PF00391 PEP-utilising enzyme, mobile domain FY534_03300 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY534_03305 PF07690 Major Facilitator Superfamily FY534_03310 PF00528 Binding-protein-dependent transport system inner membrane component FY534_03315 PF00528 Binding-protein-dependent transport system inner membrane component FY534_03325 PF03707 Bacterial signalling protein N terminal repeat FY534_03325 PF00990 Diguanylate cyclase, GGDEF domain FY534_03325 PF00563 EAL domain FY534_03330 PF00535 Glycosyl transferase family 2 FY534_03335 PF02660 Glycerol-3-phosphate acyltransferase FY534_03345 PF00067 Cytochrome P450 FY534_03350 PF01593 Flavin containing amine oxidoreductase FY534_03360 PF00348 Polyprenyl synthetase FY534_03380 PF01022 Bacterial regulatory protein, arsR family FY534_03385 PF03848 Tellurite resistance protein TehB FY534_03425 PF00589 Phage integrase family FY534_03425 PF02899 Phage integrase, N-terminal SAM-like domain FY534_03430 PF02384 N-6 DNA Methylase FY534_03440 PF18766 SWI2/SNF2 ATPase FY534_03440 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FY534_03440 PF11867 Domain of unknown function (DUF3387) FY534_03470 PF00704 Glycosyl hydrolases family 18 FY534_03470 PF01476 LysM domain FY534_03475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY534_03480 PF00085 Thioredoxin FY534_03490 PF07875 Coat F domain FY534_03495 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY534_03495 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY534_03505 PF05681 Fumarate hydratase (Fumerase) FY534_03505 PF05683 Fumarase C-terminus FY534_03515 PF00596 Class II Aldolase and Adducin N-terminal domain FY534_03525 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY534_03525 PF00591 Glycosyl transferase family, a/b domain FY534_03525 PF02885 Glycosyl transferase family, helical bundle domain FY534_03530 PF08439 Oligopeptidase F FY534_03530 PF01432 Peptidase family M3 FY534_03535 PF00512 His Kinase A (phospho-acceptor) domain FY534_03535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_03535 PF00989 PAS fold FY534_03545 PF03323 Bacillus/Clostridium GerA spore germination protein FY534_03550 PF00162 Phosphoglycerate kinase FY534_03560 PF01676 Metalloenzyme superfamily FY534_03560 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY534_03565 PF03952 Enolase, N-terminal domain FY534_03565 PF00113 Enolase, C-terminal TIM barrel domain FY534_03570 PF03840 Preprotein translocase SecG subunit FY534_03575 PF00773 RNB domain FY534_03575 PF08206 Ribonuclease B OB domain FY534_03575 PF17876 Cold shock domain FY534_03575 PF00575 S1 RNA binding domain FY534_03580 PF01668 SmpB protein FY534_03595 PF01435 Peptidase family M48 FY534_03605 PF00313 'Cold-shock' DNA-binding domain FY534_03610 PF00487 Fatty acid desaturase FY534_03620 PF01903 CbiX FY534_03625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY534_03625 PF10414 Sirohaem synthase dimerisation region FY534_03625 PF14824 Sirohaem biosynthesis protein central FY534_03630 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY534_03630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY534_03635 PF02571 Precorrin-6x reductase CbiJ/CobK FY534_03640 PF02570 Precorrin-8X methylmutase FY534_03645 PF01888 CbiD FY534_03650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY534_03655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY534_03660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY534_03665 PF01890 Cobalamin synthesis G C-terminus FY534_03665 PF11761 Cobalamin biosynthesis central region FY534_03665 PF11760 Cobalamin synthesis G N-terminal FY534_03670 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY534_03670 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY534_03675 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY534_03680 PF02277 Phosphoribosyltransferase FY534_03690 PF00581 Rhodanese-like domain FY534_03695 PF13686 DsrE/DsrF/DrsH-like family FY534_03700 PF00581 Rhodanese-like domain FY534_03700 PF01206 Sulfurtransferase TusA FY534_03705 PF00753 Metallo-beta-lactamase superfamily FY534_03705 PF00581 Rhodanese-like domain FY534_03715 PF01925 Sulfite exporter TauE/SafE FY534_03720 PF00581 Rhodanese-like domain FY534_03725 PF02583 Metal-sensitive transcriptional repressor FY534_03735 PF05958 tRNA (Uracil-5-)-methyltransferase FY534_03745 PF01614 Bacterial transcriptional regulator FY534_03745 PF09339 IclR helix-turn-helix domain FY534_03750 PF01613 Flavin reductase like domain FY534_03755 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY534_03760 PF00171 Aldehyde dehydrogenase family FY534_03765 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal FY534_03765 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal FY534_03770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY534_03775 PF00701 Dihydrodipicolinate synthetase family FY534_03780 PF08402 TOBE domain FY534_03780 PF00005 ABC transporter FY534_03785 PF00528 Binding-protein-dependent transport system inner membrane component FY534_03795 PF00753 Metallo-beta-lactamase superfamily FY534_03795 PF12706 Beta-lactamase superfamily domain FY534_03800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY534_03805 PF00106 short chain dehydrogenase FY534_03815 PF00296 Luciferase-like monooxygenase FY534_03820 PF09286 Pro-kumamolisin, activation domain FY534_03820 PF00082 Subtilase family FY534_03835 PF00535 Glycosyl transferase family 2 FY534_03840 PF00248 Aldo/keto reductase family FY534_03845 PF00202 Aminotransferase class-III FY534_03850 PF01638 HxlR-like helix-turn-helix FY534_03855 PF00085 Thioredoxin FY534_03860 PF07687 Peptidase dimerisation domain FY534_03860 PF01546 Peptidase family M20/M25/M40 FY534_03870 PF00474 Sodium:solute symporter family FY534_03880 PF08240 Alcohol dehydrogenase GroES-like domain FY534_03880 PF00107 Zinc-binding dehydrogenase FY534_03885 PF03060 Nitronate monooxygenase FY534_03890 PF00491 Arginase family FY534_03895 PF01979 Amidohydrolase family FY534_03900 PF01175 Urocanase Rossmann-like domain FY534_03900 PF17392 Urocanase C-terminal domain FY534_03900 PF17391 Urocanase N-terminal domain FY534_03910 PF01175 Urocanase Rossmann-like domain FY534_03910 PF17392 Urocanase C-terminal domain FY534_03910 PF17391 Urocanase N-terminal domain FY534_03915 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FY534_03920 PF02801 Beta-ketoacyl synthase, C-terminal domain FY534_03920 PF00109 Beta-ketoacyl synthase, N-terminal domain FY534_03925 PF13193 AMP-binding enzyme C-terminal domain FY534_03925 PF00501 AMP-binding enzyme FY534_03930 PF01476 LysM domain FY534_03930 PF00877 NlpC/P60 family FY534_03930 PF08239 Bacterial SH3 domain FY534_03935 PF00892 EamA-like transporter family FY534_03940 PF00463 Isocitrate lyase family FY534_03950 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY534_03950 PF00326 Prolyl oligopeptidase family FY534_03960 PF01641 SelR domain FY534_03980 PF00005 ABC transporter FY534_03995 PF00155 Aminotransferase class I and II FY534_04000 PF01541 GIY-YIG catalytic domain FY534_04015 PF07690 Major Facilitator Superfamily FY534_04020 PF00324 Amino acid permease FY534_04025 PF01425 Amidase FY534_04030 PF04204 Homoserine O-succinyltransferase FY534_04035 PF04055 Radical SAM superfamily FY534_04055 PF13538 UvrD-like helicase C-terminal domain FY534_04065 PF00501 AMP-binding enzyme FY534_04065 PF13193 AMP-binding enzyme C-terminal domain FY534_04065 PF16177 Acetyl-coenzyme A synthetase N-terminus FY534_04070 PF01184 GPR1/FUN34/yaaH family FY534_04085 PF00313 'Cold-shock' DNA-binding domain FY534_04095 PF01797 Transposase IS200 like FY534_04105 PF06039 Malate:quinone oxidoreductase (Mqo) FY534_04110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY534_04110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY534_04125 PF01979 Amidohydrolase family FY534_04135 PF02445 Quinolinate synthetase A protein FY534_04140 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY534_04140 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY534_04145 PF00890 FAD binding domain FY534_04145 PF02910 Fumarate reductase flavoprotein C-term FY534_04170 PF01238 Phosphomannose isomerase type I FY534_04180 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FY534_04185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY534_04185 PF02824 TGS domain FY534_04185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY534_04185 PF03129 Anticodon binding domain FY534_04190 PF00707 Translation initiation factor IF-3, C-terminal domain FY534_04190 PF05198 Translation initiation factor IF-3, N-terminal domain FY534_04195 PF01632 Ribosomal protein L35 FY534_04200 PF00453 Ribosomal protein L20 FY534_04205 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY534_04205 PF00588 SpoU rRNA Methylase family FY534_04220 PF12652 CotJB protein FY534_04230 PF00356 Bacterial regulatory proteins, lacI family FY534_04240 PF00535 Glycosyl transferase family 2 FY534_04255 PF00535 Glycosyl transferase family 2 FY534_04260 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY534_04265 PF03186 CobD/Cbib protein FY534_04270 PF02654 Cobalamin-5-phosphate synthase FY534_04275 PF00155 Aminotransferase class I and II FY534_04285 PF05067 Manganese containing catalase FY534_04290 PF01470 Pyroglutamyl peptidase FY534_04310 PF01063 Amino-transferase class IV FY534_04315 PF16870 2-oxoglutarate dehydrogenase C-terminal FY534_04315 PF00676 Dehydrogenase E1 component FY534_04315 PF02779 Transketolase, pyrimidine binding domain FY534_04315 PF16078 2-oxoglutarate dehydrogenase N-terminus FY534_04320 PF00364 Biotin-requiring enzyme FY534_04320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY534_04320 PF02817 e3 binding domain FY534_04325 PF13180 PDZ domain FY534_04335 PF03009 Glycerophosphoryl diester phosphodiesterase family FY534_04345 PF00390 Malic enzyme, N-terminal domain FY534_04345 PF03949 Malic enzyme, NAD binding domain FY534_04350 PF07905 Purine catabolism regulatory protein-like family FY534_04350 PF13556 PucR C-terminal helix-turn-helix domain FY534_04350 PF17853 GGDEF-like domain FY534_04355 PF00005 ABC transporter FY534_04355 PF03459 TOBE domain FY534_04355 PF17912 MalK OB fold domain FY534_04360 PF00381 PTS HPr component phosphorylation site FY534_04365 PF00365 Phosphofructokinase FY534_04375 PF00731 AIR carboxylase FY534_04380 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY534_04380 PF02222 ATP-grasp domain FY534_04385 PF01409 tRNA synthetases class II core domain (F) FY534_04385 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY534_04390 PF01588 Putative tRNA binding domain FY534_04390 PF03147 Ferredoxin-fold anticodon binding domain FY534_04390 PF03484 tRNA synthetase B5 domain FY534_04390 PF03483 B3/4 domain FY534_04390 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY534_04400 PF02674 Colicin V production protein FY534_04410 PF00488 MutS domain V FY534_04410 PF01713 Smr domain FY534_04415 PF00912 Transglycosylase FY534_04415 PF00905 Penicillin binding protein transpeptidase domain FY534_04420 PF01479 S4 domain FY534_04420 PF00579 tRNA synthetases class I (W and Y) FY534_04430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY534_04430 PF12729 Four helix bundle sensory module for signal transduction FY534_04430 PF00672 HAMP domain FY534_04445 PF00795 Carbon-nitrogen hydrolase FY534_04445 PF02540 NAD synthase FY534_04450 PF02540 NAD synthase FY534_04455 PF01709 Transcriptional regulator FY534_04465 PF02075 Crossover junction endodeoxyribonuclease RuvC FY534_04470 PF07499 RuvA, C-terminal domain FY534_04470 PF01330 RuvA N terminal domain FY534_04475 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY534_04475 PF17864 RuvB AAA lid domain FY534_04475 PF05491 RuvB C-terminal winged helix domain FY534_04480 PF04542 Sigma-70 region 2 FY534_04490 PF02547 Queuosine biosynthesis protein FY534_04495 PF01702 Queuine tRNA-ribosyltransferase FY534_04510 PF00990 Diguanylate cyclase, GGDEF domain FY534_04510 PF00072 Response regulator receiver domain FY534_04515 PF04239 Protein of unknown function (DUF421) FY534_04520 PF01943 Polysaccharide biosynthesis protein FY534_04520 PF14667 Polysaccharide biosynthesis C-terminal domain FY534_04530 PF02355 Protein export membrane protein FY534_04535 PF02355 Protein export membrane protein FY534_04540 PF16916 Dimerisation domain of Zinc Transporter FY534_04540 PF01545 Cation efflux family FY534_04545 PF17768 RecJ OB domain FY534_04545 PF02272 DHHA1 domain FY534_04545 PF01368 DHH family FY534_04550 PF00156 Phosphoribosyl transferase domain FY534_04555 PF02824 TGS domain FY534_04555 PF04607 Region found in RelA / SpoT proteins FY534_04555 PF13291 ACT domain FY534_04560 PF02580 D-Tyr-tRNA(Tyr) deacylase FY534_04570 PF09335 SNARE associated Golgi protein FY534_04575 PF01790 Prolipoprotein diacylglyceryl transferase FY534_04580 PF00072 Response regulator receiver domain FY534_04580 PF00990 Diguanylate cyclase, GGDEF domain FY534_04590 PF00999 Sodium/hydrogen exchanger family FY534_04590 PF02080 TrkA-C domain FY534_04590 PF02254 TrkA-N domain FY534_04595 PF01925 Sulfite exporter TauE/SafE FY534_04600 PF13508 Acetyltransferase (GNAT) domain FY534_04605 PF17863 AAA lid domain FY534_04605 PF07726 ATPase family associated with various cellular activities (AAA) FY534_04620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY534_04620 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY534_04630 PF01476 LysM domain FY534_04630 PF00877 NlpC/P60 family FY534_04635 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FY534_04640 PF01593 Flavin containing amine oxidoreductase FY534_04645 PF00762 Ferrochelatase FY534_04650 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY534_04655 PF06491 Disulphide isomerase FY534_04660 PF02595 Glycerate kinase family FY534_04665 PF06778 Chlorite dismutase FY534_04670 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY534_04675 PF02742 Iron dependent repressor, metal binding and dimerisation domain FY534_04675 PF18357 Diphteria toxin repressor SH3 domain FY534_04675 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY534_04690 PF01207 Dihydrouridine synthase (Dus) FY534_04695 PF07690 Major Facilitator Superfamily FY534_04700 PF12705 PD-(D/E)XK nuclease superfamily FY534_04700 PF13361 UvrD-like helicase C-terminal domain FY534_04705 PF00580 UvrD/REP helicase N-terminal domain FY534_04705 PF13361 UvrD-like helicase C-terminal domain FY534_04705 PF12705 PD-(D/E)XK nuclease superfamily FY534_04710 PF00483 Nucleotidyl transferase FY534_04720 PF01293 Phosphoenolpyruvate carboxykinase FY534_04725 PF00994 Probable molybdopterin binding domain FY534_04725 PF03454 MoeA C-terminal region (domain IV) FY534_04725 PF03453 MoeA N-terminal region (domain I and II) FY534_04730 PF00248 Aldo/keto reductase family FY534_04735 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY534_04745 PF00266 Aminotransferase class-V FY534_04760 PF00108 Thiolase, N-terminal domain FY534_04760 PF02803 Thiolase, C-terminal domain FY534_04765 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FY534_04765 PF01189 16S rRNA methyltransferase RsmB/F FY534_04765 PF17126 RsmF rRNA methyltransferase first C-terminal domain FY534_04770 PF14489 QueF-like protein FY534_04775 PF02261 Aspartate decarboxylase FY534_04785 PF07690 Major Facilitator Superfamily FY534_04795 PF00005 ABC transporter FY534_04825 PF03129 Anticodon binding domain FY534_04825 PF13393 Histidyl-tRNA synthetase FY534_04830 PF02938 GAD domain FY534_04830 PF01336 OB-fold nucleic acid binding domain FY534_04830 PF00152 tRNA synthetases class II (D, K and N) FY534_04840 PF01212 Beta-eliminating lyase FY534_04845 PF12002 MgsA AAA+ ATPase C terminal FY534_04845 PF00004 ATPase family associated with various cellular activities (AAA) FY534_04845 PF16193 AAA C-terminal domain FY534_04850 PF02082 Transcriptional regulator FY534_04855 PF00266 Aminotransferase class-V FY534_04865 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY534_04870 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY534_04875 PF01594 AI-2E family transporter FY534_04880 PF02272 DHHA1 domain FY534_04880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY534_04880 PF01411 tRNA synthetases class II (A) FY534_04885 PF06135 IreB regulatory phosphoprotein FY534_04890 PF03652 Holliday junction resolvase FY534_04895 PF02618 YceG-like family FY534_04900 PF04545 Sigma-70, region 4 FY534_04900 PF04542 Sigma-70 region 2 FY534_04910 PF01926 50S ribosome-binding GTPase FY534_04915 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY534_04915 PF08501 Shikimate dehydrogenase substrate binding domain FY534_04920 PF01985 CRS1 / YhbY (CRM) domain FY534_04925 PF01467 Cytidylyltransferase-like FY534_04930 PF01966 HD domain FY534_04945 PF10531 SLBB domain FY534_04955 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY534_04960 PF06144 DNA polymerase III, delta subunit FY534_04970 PF01649 Ribosomal protein S20 FY534_04975 PF03418 Germination protease FY534_04980 PF01464 Transglycosylase SLT domain FY534_04995 PF00679 Elongation factor G C-terminus FY534_04995 PF00009 Elongation factor Tu GTP binding domain FY534_04995 PF06421 GTP-binding protein LepA C-terminus FY534_04995 PF03144 Elongation factor Tu domain 2 FY534_05000 PF06969 HemN C-terminal domain FY534_05000 PF04055 Radical SAM superfamily FY534_05005 PF01628 HrcA protein C terminal domain FY534_05005 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding FY534_05010 PF01025 GrpE FY534_05015 PF00012 Hsp70 protein FY534_05020 PF01556 DnaJ C terminal domain FY534_05020 PF00684 DnaJ central domain FY534_05020 PF00226 DnaJ domain FY534_05030 PF04452 RNA methyltransferase FY534_05035 PF00919 Uncharacterized protein family UPF0004 FY534_05035 PF04055 Radical SAM superfamily FY534_05035 PF01938 TRAM domain FY534_05045 PF01791 DeoC/LacD family aldolase FY534_05050 PF02690 Na+/Pi-cotransporter FY534_05055 PF01165 Ribosomal protein S21 FY534_05060 PF09424 Yqey-like protein FY534_05075 PF02562 PhoH-like protein FY534_05080 PF07698 7TM receptor with intracellular HD hydrolase FY534_05080 PF01966 HD domain FY534_05080 PF07697 7TM-HD extracellular FY534_05085 PF02130 Uncharacterized protein family UPF0054 FY534_05090 PF01219 Prokaryotic diacylglycerol kinase FY534_05095 PF07650 KH domain FY534_05095 PF01926 50S ribosome-binding GTPase FY534_05105 PF02565 Recombination protein O C terminal FY534_05105 PF11967 Recombination protein O N terminal FY534_05110 PF00571 CBS domain FY534_05110 PF08279 HTH domain FY534_05115 PF03618 Kinase/pyrophosphorylase FY534_05120 PF08275 DNA primase catalytic core, N-terminal domain FY534_05120 PF01807 CHC2 zinc finger FY534_05120 PF10410 DnaB-helicase binding domain of primase FY534_05125 PF03979 Sigma-70 factor, region 1.1 FY534_05125 PF00140 Sigma-70 factor, region 1.2 FY534_05125 PF04542 Sigma-70 region 2 FY534_05125 PF04539 Sigma-70 region 3 FY534_05125 PF04545 Sigma-70, region 4 FY534_05130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY534_05130 PF02770 Acyl-CoA dehydrogenase, middle domain FY534_05130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY534_05145 PF01784 NIF3 (NGG1p interacting factor 3) FY534_05155 PF00583 Acetyltransferase (GNAT) family FY534_05160 PF02086 D12 class N6 adenine-specific DNA methyltransferase FY534_05175 PF04343 Protein of unknown function, DUF488 FY534_05185 PF00269 Small, acid-soluble spore proteins, alpha/beta type FY534_05195 PF01152 Bacterial-like globin FY534_05205 PF00877 NlpC/P60 family FY534_05215 PF02424 ApbE family FY534_05235 PF04199 Putative cyclase FY534_05240 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY534_05240 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY534_05245 PF00892 EamA-like transporter family FY534_05250 PF01522 Polysaccharide deacetylase FY534_05255 PF00011 Hsp20/alpha crystallin family FY534_05260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY534_05260 PF10414 Sirohaem synthase dimerisation region FY534_05260 PF14824 Sirohaem biosynthesis protein central FY534_05265 PF04055 Radical SAM superfamily FY534_05270 PF01242 6-pyruvoyl tetrahydropterin synthase FY534_05275 PF00672 HAMP domain FY534_05275 PF01966 HD domain FY534_05280 PF01638 HxlR-like helix-turn-helix FY534_05285 PF01923 Cobalamin adenosyltransferase FY534_05305 PF01040 UbiA prenyltransferase family FY534_05315 PF00501 AMP-binding enzyme FY534_05315 PF13193 AMP-binding enzyme C-terminal domain FY534_05320 PF00425 chorismate binding enzyme FY534_05325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY534_05325 PF16582 Middle domain of thiamine pyrophosphate FY534_05325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY534_05330 PF00561 alpha/beta hydrolase fold FY534_05335 PF00999 Sodium/hydrogen exchanger family FY534_05340 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase FY534_05340 PF04101 Glycosyltransferase family 28 C-terminal domain FY534_05345 PF01522 Polysaccharide deacetylase FY534_05355 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase FY534_05355 PF00534 Glycosyl transferases group 1 FY534_05365 PF01613 Flavin reductase like domain FY534_05370 PF01144 Coenzyme A transferase FY534_05375 PF01144 Coenzyme A transferase FY534_05380 PF01895 PhoU domain FY534_05425 PF04055 Radical SAM superfamily FY534_05425 PF12544 Lysine-2,3-aminomutase FY534_05430 PF02655 ATP-grasp domain FY534_05430 PF00206 Lyase FY534_05435 PF07687 Peptidase dimerisation domain FY534_05435 PF01546 Peptidase family M20/M25/M40 FY534_05445 PF00083 Sugar (and other) transporter FY534_05490 PF18470 Cas9 alpha-helical lobe domain FY534_05490 PF13395 HNH endonuclease FY534_05490 PF18541 RuvC endonuclease subdomain 3 FY534_05495 PF01867 CRISPR associated protein Cas1 FY534_05500 PF09827 CRISPR associated protein Cas2 FY534_05530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY534_05530 PF05698 Bacterial trigger factor protein (TF) C-terminus FY534_05530 PF05697 Bacterial trigger factor protein (TF) FY534_05535 PF00574 Clp protease FY534_05540 PF06689 ClpX C4-type zinc finger FY534_05540 PF07724 AAA domain (Cdc48 subfamily) FY534_05540 PF10431 C-terminal, D2-small domain, of ClpB protein FY534_05545 PF00004 ATPase family associated with various cellular activities (AAA) FY534_05545 PF05362 Lon protease (S16) C-terminal proteolytic domain FY534_05550 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY534_05550 PF05362 Lon protease (S16) C-terminal proteolytic domain FY534_05550 PF00004 ATPase family associated with various cellular activities (AAA) FY534_05555 PF01926 50S ribosome-binding GTPase FY534_05560 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FY534_05560 PF01488 Shikimate / quinate 5-dehydrogenase FY534_05560 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FY534_05565 PF01578 Cytochrome C assembly protein FY534_05570 PF03900 Porphobilinogen deaminase, C-terminal domain FY534_05570 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY534_05580 PF00490 Delta-aminolevulinic acid dehydratase FY534_05585 PF00202 Aminotransferase class-III FY534_05600 PF10458 Valyl tRNA synthetase tRNA binding arm FY534_05600 PF00133 tRNA synthetases class I (I, L, M and V) FY534_05600 PF08264 Anticodon-binding domain of tRNA FY534_05605 PF02875 Mur ligase family, glutamate ligase domain FY534_05605 PF08245 Mur ligase middle domain FY534_05610 PF08245 Mur ligase middle domain FY534_05610 PF02875 Mur ligase family, glutamate ligase domain FY534_05610 PF01225 Mur ligase family, catalytic domain FY534_05625 PF00437 Type II/IV secretion system protein FY534_05630 PF01476 LysM domain FY534_05630 PF06725 3D domain FY534_05640 PF04002 RadC-like JAB domain FY534_05660 PF03775 Septum formation inhibitor MinC, C-terminal domain FY534_05665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY534_05680 PF00829 Ribosomal prokaryotic L21 protein FY534_05690 PF01016 Ribosomal L27 protein FY534_05710 PF00437 Type II/IV secretion system protein FY534_05720 PF07963 Prokaryotic N-terminal methylation motif FY534_05740 PF01202 Shikimate kinase FY534_05745 PF08299 Bacterial dnaA protein helix-turn-helix FY534_05745 PF00308 Bacterial dnaA protein FY534_05755 PF00176 SNF2 family N-terminal domain FY534_05755 PF00271 Helicase conserved C-terminal domain FY534_05760 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY534_05760 PF01571 Aminomethyltransferase folate-binding domain FY534_05765 PF02347 Glycine cleavage system P-protein FY534_05770 PF02347 Glycine cleavage system P-protein FY534_05775 PF00300 Histidine phosphatase superfamily (branch 1) FY534_05780 PF01220 Dehydroquinase class II FY534_05785 PF01132 Elongation factor P (EF-P) OB domain FY534_05785 PF08207 Elongation factor P (EF-P) KOW-like domain FY534_05785 PF09285 Elongation factor P, C-terminal FY534_05800 PF06686 Stage III sporulation protein AC/AD protein family FY534_05805 PF06686 Stage III sporulation protein AC/AD protein family FY534_05810 PF09546 Stage III sporulation protein AE (spore_III_AE) FY534_05825 PF12685 SpoIIIAH-like protein FY534_05830 PF00364 Biotin-requiring enzyme FY534_05840 PF03780 Asp23 family, cell envelope-related function FY534_05855 PF01029 NusB family FY534_05860 PF00814 Glycoprotease family FY534_05865 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY534_05870 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY534_05870 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY534_05875 PF02601 Exonuclease VII, large subunit FY534_05875 PF13742 OB-fold nucleic acid binding domain FY534_05880 PF02609 Exonuclease VII small subunit FY534_05885 PF00348 Polyprenyl synthetase FY534_05895 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY534_05895 PF02780 Transketolase, C-terminal domain FY534_05895 PF02779 Transketolase, pyrimidine binding domain FY534_05900 PF01728 FtsJ-like methyltransferase FY534_05900 PF01479 S4 domain FY534_05910 PF01513 ATP-NAD kinase FY534_05915 PF13476 AAA domain FY534_05920 PF05580 SpoIVB peptidase S55 FY534_05920 PF17820 PDZ domain FY534_05925 PF08769 Sporulation initiation factor Spo0A C terminal FY534_05925 PF00072 Response regulator receiver domain FY534_05930 PF01636 Phosphotransferase enzyme family FY534_05935 PF12867 DinB superfamily FY534_05945 PF01476 LysM domain FY534_05945 PF06725 3D domain FY534_05955 PF01476 LysM domain FY534_05955 PF05257 CHAP domain FY534_05960 PF08239 Bacterial SH3 domain FY534_05960 PF00877 NlpC/P60 family FY534_05960 PF01476 LysM domain FY534_05965 PF00730 HhH-GPD superfamily base excision DNA repair protein FY534_05970 PF03773 Predicted permease FY534_05975 PF00704 Glycosyl hydrolases family 18 FY534_05980 PF00753 Metallo-beta-lactamase superfamily FY534_05985 PF02597 ThiS family FY534_05990 PF01967 MoaC family FY534_06000 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FY534_06000 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FY534_06005 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY534_06005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY534_06010 PF00676 Dehydrogenase E1 component FY534_06015 PF02780 Transketolase, C-terminal domain FY534_06015 PF02779 Transketolase, pyrimidine binding domain FY534_06020 PF02817 e3 binding domain FY534_06020 PF00364 Biotin-requiring enzyme FY534_06020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY534_06025 PF04055 Radical SAM superfamily FY534_06025 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY534_06030 PF03099 Biotin/lipoate A/B protein ligase family FY534_06035 PF02310 B12 binding domain FY534_06035 PF01642 Methylmalonyl-CoA mutase FY534_06040 PF02310 B12 binding domain FY534_06045 PF01039 Carboxyl transferase domain FY534_06055 PF07687 Peptidase dimerisation domain FY534_06055 PF01546 Peptidase family M20/M25/M40 FY534_06060 PF00293 NUDIX domain FY534_06065 PF01944 Stage II sporulation protein M FY534_06075 PF02899 Phage integrase, N-terminal SAM-like domain FY534_06075 PF00589 Phage integrase family FY534_06080 PF01676 Metalloenzyme superfamily FY534_06090 PF00768 D-alanyl-D-alanine carboxypeptidase FY534_06090 PF07943 Penicillin-binding protein 5, C-terminal domain FY534_06100 PF01740 STAS domain FY534_06105 PF13581 Histidine kinase-like ATPase domain FY534_06110 PF04542 Sigma-70 region 2 FY534_06110 PF04539 Sigma-70 region 3 FY534_06110 PF04545 Sigma-70, region 4 FY534_06115 PF03862 SpoVAC/SpoVAEB sporulation membrane protein FY534_06120 PF07451 Stage V sporulation protein AD (SpoVAD) FY534_06125 PF03862 SpoVAC/SpoVAEB sporulation membrane protein FY534_06130 PF14097 Stage V sporulation protein AE1 FY534_06140 PF00902 Sec-independent protein translocase protein (TatC) FY534_06145 PF02416 mttA/Hcf106 family FY534_06155 PF04542 Sigma-70 region 2 FY534_06155 PF04545 Sigma-70, region 4 FY534_06165 PF02163 Peptidase family M50 FY534_06170 PF02616 Segregation and condensation protein ScpA FY534_06175 PF04079 Segregation and condensation complex subunit ScpB FY534_06185 PF09579 Sporulation protein YtfJ (Spore_YtfJ) FY534_06190 PF07670 Nucleoside recognition FY534_06195 PF07670 Nucleoside recognition FY534_06200 PF01479 S4 domain FY534_06200 PF00849 RNA pseudouridylate synthase FY534_06205 PF00072 Response regulator receiver domain FY534_06205 PF00486 Transcriptional regulatory protein, C terminal FY534_06210 PF00672 HAMP domain FY534_06210 PF00989 PAS fold FY534_06210 PF00512 His Kinase A (phospho-acceptor) domain FY534_06210 PF18698 Histidine kinase sensor domain FY534_06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_06220 PF02146 Sir2 family FY534_06240 PF13180 PDZ domain FY534_06240 PF17820 PDZ domain FY534_06245 PF08241 Methyltransferase domain FY534_06255 PF00580 UvrD/REP helicase N-terminal domain FY534_06255 PF13361 UvrD-like helicase C-terminal domain FY534_06280 PF00356 Bacterial regulatory proteins, lacI family FY534_06285 PF05389 Negative regulator of genetic competence (MecA) FY534_06290 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FY534_06290 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FY534_06310 PF02224 Cytidylate kinase FY534_06320 PF00575 S1 RNA binding domain FY534_06325 PF13180 PDZ domain FY534_06325 PF02163 Peptidase family M50 FY534_06330 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY534_06330 PF01926 50S ribosome-binding GTPase FY534_06335 PF02660 Glycerol-3-phosphate acyltransferase FY534_06340 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY534_06340 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY534_06345 PF01597 Glycine cleavage H-protein FY534_06350 PF09547 Stage IV sporulation protein A (spore_IV_A) FY534_06360 PF02081 Tryptophan RNA-binding attenuator protein FY534_06370 PF01209 ubiE/COQ5 methyltransferase family FY534_06375 PF00348 Polyprenyl synthetase FY534_06380 PF00334 Nucleoside diphosphate kinase FY534_06390 PF03705 CheR methyltransferase, all-alpha domain FY534_06390 PF01739 CheR methyltransferase, SAM binding domain FY534_06400 PF00905 Penicillin binding protein transpeptidase domain FY534_06400 PF00912 Transglycosylase FY534_06400 PF17092 Penicillin-binding protein OB-like domain FY534_06405 PF02817 e3 binding domain FY534_06405 PF00364 Biotin-requiring enzyme FY534_06405 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY534_06435 PF07690 Major Facilitator Superfamily FY534_06440 PF01925 Sulfite exporter TauE/SafE FY534_06445 PF00465 Iron-containing alcohol dehydrogenase FY534_06450 PF00171 Aldehyde dehydrogenase family FY534_06460 PF07690 Major Facilitator Superfamily FY534_06480 PF01654 Cytochrome bd terminal oxidase subunit I FY534_06485 PF00072 Response regulator receiver domain FY534_06485 PF00196 Bacterial regulatory proteins, luxR family FY534_06490 PF07730 Histidine kinase FY534_06490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_06500 PF14759 Reductase C-terminal FY534_06500 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY534_06510 PF00581 Rhodanese-like domain FY534_06515 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY534_06520 PF00248 Aldo/keto reductase family FY534_06525 PF08141 Small acid-soluble spore protein H family FY534_06530 PF01479 S4 domain FY534_06530 PF00849 RNA pseudouridylate synthase FY534_06535 PF05343 M42 glutamyl aminopeptidase FY534_06540 PF05343 M42 glutamyl aminopeptidase FY534_06545 PF05343 M42 glutamyl aminopeptidase FY534_06550 PF01264 Chorismate synthase FY534_06555 PF01761 3-dehydroquinate synthase FY534_06560 PF07736 Chorismate mutase type I FY534_06565 PF00591 Glycosyl transferase family, a/b domain FY534_06565 PF02885 Glycosyl transferase family, helical bundle domain FY534_06570 PF00218 Indole-3-glycerol phosphate synthase FY534_06575 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY534_06580 PF00291 Pyridoxal-phosphate dependent enzyme FY534_06585 PF00290 Tryptophan synthase alpha chain FY534_06590 PF00793 DAHP synthetase I family FY534_06590 PF18152 DAHP synthase ferredoxin-like domain FY534_06595 PF02153 Prephenate dehydrogenase FY534_06600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY534_06610 PF08858 IDEAL domain FY534_06610 PF08864 UPF0302 domain FY534_06615 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FY534_06615 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FY534_06625 PF00180 Isocitrate/isopropylmalate dehydrogenase FY534_06625 PF18324 Hypothetical protein TT1725 FY534_06630 PF02673 Bacitracin resistance protein BacA FY534_06635 PF07670 Nucleoside recognition FY534_06640 PF03819 MazG nucleotide pyrophosphohydrolase domain FY534_06650 PF05173 Dihydrodipicolinate reductase, C-terminus FY534_06650 PF01113 Dihydrodipicolinate reductase, N-terminus FY534_06655 PF13439 Glycosyltransferase Family 4 FY534_06655 PF00534 Glycosyl transferases group 1 FY534_06660 PF12627 Probable RNA and SrmB- binding site of polymerase A FY534_06660 PF01743 Poly A polymerase head domain FY534_06660 PF13735 tRNA nucleotidyltransferase domain 2 putative FY534_06675 PF04851 Type III restriction enzyme, res subunit FY534_06675 PF00929 Exonuclease FY534_06675 PF13307 Helicase C-terminal domain FY534_06680 PF01048 Phosphorylase superfamily FY534_06685 PF01008 Initiation factor 2 subunit family FY534_06690 PF01979 Amidohydrolase family FY534_06695 PF01975 Survival protein SurE FY534_06700 PF14084 Protein of unknown function (DUF4264) FY534_06715 PF01434 Peptidase family M41 FY534_06715 PF06480 FtsH Extracellular FY534_06715 PF17862 AAA+ lid domain FY534_06715 PF00004 ATPase family associated with various cellular activities (AAA) FY534_06720 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FY534_06725 PF01336 OB-fold nucleic acid binding domain FY534_06725 PF00152 tRNA synthetases class II (D, K and N) FY534_06730 PF07261 Replication initiation and membrane attachment FY534_06735 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family FY534_06740 PF07478 D-ala D-ala ligase C-terminus FY534_06740 PF01820 D-ala D-ala ligase N-terminus FY534_06745 PF01225 Mur ligase family, catalytic domain FY534_06745 PF08245 Mur ligase middle domain FY534_06745 PF02875 Mur ligase family, glutamate ligase domain FY534_06755 PF01588 Putative tRNA binding domain FY534_06760 PF01654 Cytochrome bd terminal oxidase subunit I FY534_06765 PF02322 Cytochrome bd terminal oxidase subunit II FY534_06770 PF01206 Sulfurtransferase TusA FY534_06770 PF00581 Rhodanese-like domain FY534_06775 PF00005 ABC transporter FY534_06780 PF00326 Prolyl oligopeptidase family FY534_06785 PF13180 PDZ domain FY534_06790 PF00501 AMP-binding enzyme FY534_06790 PF14535 AMP-binding enzyme C-terminal domain FY534_06795 PF00155 Aminotransferase class I and II FY534_06805 PF02219 Methylenetetrahydrofolate reductase FY534_06805 PF02574 Homocysteine S-methyltransferase FY534_06810 PF00809 Pterin binding enzyme FY534_06810 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY534_06810 PF02574 Homocysteine S-methyltransferase FY534_06810 PF02310 B12 binding domain FY534_06810 PF02607 B12 binding domain FY534_06815 PF00106 short chain dehydrogenase FY534_06825 PF03129 Anticodon binding domain FY534_06825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY534_06835 PF01725 Ham1 family FY534_06840 PF01177 Asp/Glu/Hydantoin racemase FY534_06845 PF01047 MarR family FY534_06855 PF00107 Zinc-binding dehydrogenase FY534_06855 PF08240 Alcohol dehydrogenase GroES-like domain FY534_06860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY534_06860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY534_06860 PF02770 Acyl-CoA dehydrogenase, middle domain FY534_06865 PF00501 AMP-binding enzyme FY534_06865 PF13193 AMP-binding enzyme C-terminal domain FY534_06870 PF00550 Phosphopantetheine attachment site FY534_06880 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY534_06880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY534_06890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY534_06890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY534_06890 PF02770 Acyl-CoA dehydrogenase, middle domain FY534_06895 PF18152 DAHP synthase ferredoxin-like domain FY534_06895 PF00793 DAHP synthetase I family FY534_06910 PF00196 Bacterial regulatory proteins, luxR family FY534_06915 PF00248 Aldo/keto reductase family FY534_06920 PF00106 short chain dehydrogenase FY534_06930 PF07690 Major Facilitator Superfamily FY534_06940 PF17773 UPF0176 acylphosphatase like domain FY534_06940 PF12368 Rhodanase C-terminal FY534_06940 PF00581 Rhodanese-like domain FY534_06950 PF13085 2Fe-2S iron-sulfur cluster binding domain FY534_06950 PF13183 4Fe-4S dicluster domain FY534_06955 PF00890 FAD binding domain FY534_06955 PF02910 Fumarate reductase flavoprotein C-term FY534_06960 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY534_06965 PF01541 GIY-YIG catalytic domain FY534_06965 PF08459 UvrC Helix-hairpin-helix N-terminal FY534_06965 PF02151 UvrB/uvrC motif FY534_06990 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY534_07000 PF00155 Aminotransferase class I and II FY534_07005 PF00291 Pyridoxal-phosphate dependent enzyme FY534_07005 PF13291 ACT domain FY534_07015 PF01699 Sodium/calcium exchanger protein FY534_07030 PF00719 Inorganic pyrophosphatase FY534_07055 PF00535 Glycosyl transferase family 2 FY534_07065 PF01047 MarR family FY534_07110 PF03477 ATP cone domain FY534_07110 PF00317 Ribonucleotide reductase, all-alpha domain FY534_07110 PF02867 Ribonucleotide reductase, barrel domain FY534_07115 PF03477 ATP cone domain FY534_07120 PF13344 Haloacid dehalogenase-like hydrolase FY534_07130 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY534_07130 PF00753 Metallo-beta-lactamase superfamily FY534_07140 PF00535 Glycosyl transferase family 2 FY534_07150 PF01678 Diaminopimelate epimerase FY534_07170 PF00672 HAMP domain FY534_07170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_07170 PF00512 His Kinase A (phospho-acceptor) domain FY534_07175 PF00672 HAMP domain FY534_07175 PF00512 His Kinase A (phospho-acceptor) domain FY534_07175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_07180 PF00072 Response regulator receiver domain FY534_07180 PF00486 Transcriptional regulatory protein, C terminal FY534_07190 PF01726 LexA DNA binding domain FY534_07190 PF00717 Peptidase S24-like FY534_07230 PF00437 Type II/IV secretion system protein FY534_07250 PF00360 Phytochrome region FY534_07250 PF00990 Diguanylate cyclase, GGDEF domain FY534_07250 PF01590 GAF domain FY534_07250 PF00563 EAL domain FY534_07275 PF00216 Bacterial DNA-binding protein FY534_07295 PF03323 Bacillus/Clostridium GerA spore germination protein FY534_07310 PF01209 ubiE/COQ5 methyltransferase family FY534_07315 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FY534_07315 PF18277 AbrB C-terminal domain FY534_07320 PF17154 Gammaproteobacterial periplasmic sensor domain FY534_07320 PF00672 HAMP domain FY534_07320 PF00990 Diguanylate cyclase, GGDEF domain FY534_07320 PF00563 EAL domain FY534_07325 PF00929 Exonuclease FY534_07325 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY534_07325 PF14579 Helix-hairpin-helix motif FY534_07325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY534_07325 PF02811 PHP domain FY534_07440 PF00990 Diguanylate cyclase, GGDEF domain FY534_07460 PF01850 PIN domain FY534_07515 PF02371 Transposase IS116/IS110/IS902 family FY534_07515 PF01548 Transposase FY534_07545 PF00005 ABC transporter FY534_07550 PF00899 ThiF family FY534_07585 PF03323 Bacillus/Clostridium GerA spore germination protein FY534_07620 PF01061 ABC-2 type transporter FY534_07625 PF13732 Domain of unknown function (DUF4162) FY534_07625 PF00005 ABC transporter FY534_07635 PF03551 Transcriptional regulator PadR-like family FY534_07665 PF13411 MerR HTH family regulatory protein FY534_07685 PF01476 LysM domain FY534_07705 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FY534_07705 PF18766 SWI2/SNF2 ATPase FY534_07705 PF11867 Domain of unknown function (DUF3387) FY534_07715 PF02384 N-6 DNA Methylase FY534_07715 PF12161 HsdM N-terminal domain FY534_07760 PF00004 ATPase family associated with various cellular activities (AAA) FY534_07800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_07800 PF13426 PAS domain FY534_07800 PF00512 His Kinase A (phospho-acceptor) domain FY534_07800 PF13188 PAS domain FY534_07800 PF00989 PAS fold FY534_07805 PF00196 Bacterial regulatory proteins, luxR family FY534_07805 PF00072 Response regulator receiver domain FY534_07810 PF03707 Bacterial signalling protein N terminal repeat FY534_07810 PF00563 EAL domain FY534_07810 PF00990 Diguanylate cyclase, GGDEF domain FY534_07885 PF11799 impB/mucB/samB family C-terminal domain FY534_07885 PF00817 impB/mucB/samB family FY534_07900 PF00929 Exonuclease FY534_07900 PF04851 Type III restriction enzyme, res subunit FY534_07900 PF13307 Helicase C-terminal domain FY534_07910 PF01555 DNA methylase FY534_07915 PF00589 Phage integrase family FY534_07920 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FY534_07920 PF18277 AbrB C-terminal domain FY534_07950 PF01555 DNA methylase FY534_08055 PF00589 Phage integrase family FY534_08055 PF14659 Phage integrase, N-terminal SAM-like domain FY534_08070 PF01609 Transposase DDE domain FY534_08085 PF03951 Glutamine synthetase, beta-Grasp domain FY534_08085 PF00120 Glutamine synthetase, catalytic domain FY534_08090 PF13411 MerR HTH family regulatory protein FY534_08095 PF06838 Methionine gamma-lyase FY534_08110 PF00004 ATPase family associated with various cellular activities (AAA) FY534_08110 PF17866 AAA lid domain FY534_08170 PF17209 Hfq protein FY534_08190 PF08676 MutL C terminal dimerisation domain FY534_08190 PF01119 DNA mismatch repair protein, C-terminal domain FY534_08195 PF05192 MutS domain III FY534_08195 PF05190 MutS family domain IV FY534_08195 PF00488 MutS domain V FY534_08195 PF01624 MutS domain I FY534_08205 PF04055 Radical SAM superfamily FY534_08205 PF01938 TRAM domain FY534_08205 PF00919 Uncharacterized protein family UPF0004 FY534_08210 PF02567 Phenazine biosynthesis-like protein FY534_08215 PF14398 YheC/D like ATP-grasp FY534_08235 PF10628 Outer spore coat protein E (CotE) FY534_08245 PF04232 Stage V sporulation protein S (SpoVS) FY534_08250 PF13277 YmdB-like protein FY534_08255 PF12072 Domain of unknown function (DUF3552) FY534_08255 PF00013 KH domain FY534_08255 PF01966 HD domain FY534_08265 PF00154 recA bacterial DNA recombination protein FY534_08270 PF00271 Helicase conserved C-terminal domain FY534_08270 PF00270 DEAD/DEAH box helicase FY534_08275 PF18146 Damage-inducible protein CinA KH domain FY534_08275 PF00994 Probable molybdopterin binding domain FY534_08275 PF02464 Competence-damaged protein FY534_08280 PF01066 CDP-alcohol phosphatidyltransferase FY534_08285 PF04461 Protein of unknown function (DUF520) FY534_08290 PF13464 Domain of unknown function (DUF4115) FY534_08295 PF11868 Protein of unknown function (DUF3388) FY534_08315 PF17854 FtsK alpha domain FY534_08315 PF09397 Ftsk gamma domain FY534_08315 PF01580 FtsK/SpoIIIE family FY534_08325 PF00574 Clp protease FY534_08330 PF01566 Natural resistance-associated macrophage protein FY534_08340 PF00753 Metallo-beta-lactamase superfamily FY534_08340 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY534_08340 PF17770 Ribonuclease J C-terminal domain FY534_08350 PF00701 Dihydrodipicolinate synthetase family FY534_08355 PF00696 Amino acid kinase family FY534_08355 PF13840 ACT domain FY534_08360 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY534_08360 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY534_08365 PF02441 Flavoprotein FY534_08370 PF16924 Dipicolinate synthase subunit A N-terminal domain FY534_08370 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY534_08375 PF00692 dUTPase FY534_08380 PF05193 Peptidase M16 inactive domain FY534_08380 PF00675 Insulinase (Peptidase family M16) FY534_08385 PF01522 Polysaccharide deacetylase FY534_08390 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY534_08390 PF00013 KH domain FY534_08390 PF00575 S1 RNA binding domain FY534_08390 PF01138 3' exoribonuclease family, domain 1 FY534_08390 PF03725 3' exoribonuclease family, domain 2 FY534_08395 PF00312 Ribosomal protein S15 FY534_08400 PF06574 FAD synthetase FY534_08400 PF01687 Riboflavin kinase FY534_08405 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY534_08405 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY534_08405 PF09157 Pseudouridine synthase II TruB, C-terminal FY534_08415 PF02033 Ribosome-binding factor A FY534_08420 PF00009 Elongation factor Tu GTP binding domain FY534_08420 PF04760 Translation initiation factor IF-2, N-terminal region FY534_08420 PF11987 Translation-initiation factor 2 FY534_08435 PF13184 NusA-like KH domain FY534_08435 PF00575 S1 RNA binding domain FY534_08435 PF08529 NusA N-terminal domain FY534_08440 PF02576 RimP N-terminal domain FY534_08440 PF17384 RimP C-terminal SH3 domain FY534_08445 PF14492 Elongation Factor G, domain II FY534_08445 PF00009 Elongation factor Tu GTP binding domain FY534_08445 PF03144 Elongation factor Tu domain 2 FY534_08445 PF00679 Elongation factor G C-terminus FY534_08450 PF00800 Prephenate dehydratase FY534_08450 PF01842 ACT domain FY534_08450 PF01817 Chorismate mutase type II FY534_08455 PF11490 DNA polymerase III polC-type N-terminus II FY534_08455 PF14480 DNA polymerase III polC-type N-terminus I FY534_08455 PF02811 PHP domain FY534_08455 PF00929 Exonuclease FY534_08455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY534_08455 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY534_08455 PF14579 Helix-hairpin-helix motif FY534_08460 PF17820 PDZ domain FY534_08460 PF02163 Peptidase family M50 FY534_08465 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY534_08465 PF13288 DXP reductoisomerase C-terminal domain FY534_08465 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY534_08475 PF01255 Putative undecaprenyl diphosphate synthase FY534_08480 PF01765 Ribosome recycling factor FY534_08485 PF00696 Amino acid kinase family FY534_08490 PF00889 Elongation factor TS FY534_08495 PF00318 Ribosomal protein S2 FY534_08505 PF03975 CheD chemotactic sensory transduction FY534_08515 PF01584 CheW-like domain FY534_08520 PF02895 Signal transducing histidine kinase, homodimeric domain FY534_08520 PF01584 CheW-like domain FY534_08520 PF01627 Hpt domain FY534_08520 PF07194 P2 response regulator binding domain FY534_08520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_08525 PF10609 NUBPL iron-transfer P-loop NTPase FY534_08530 PF00448 SRP54-type protein, GTPase domain FY534_08535 PF00771 FHIPEP family FY534_08540 PF01312 FlhB HrpN YscU SpaS Family FY534_08545 PF01311 Bacterial export proteins, family 1 FY534_08550 PF01313 Bacterial export proteins, family 3 FY534_08555 PF00813 FliP family FY534_08565 PF00072 Response regulator receiver domain FY534_08570 PF04509 CheC-like family FY534_08570 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY534_08575 PF02154 Flagellar motor switch protein FliM FY534_08575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY534_08590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY534_08590 PF00460 Flagella basal body rod protein FY534_08600 PF03963 Flagellar hook capping protein - N-terminal region FY534_08620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY534_08620 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY534_08620 PF18269 T3SS EscN ATPase C-terminal domain FY534_08630 PF01706 FliG C-terminal domain FY534_08630 PF14841 FliG middle domain FY534_08630 PF14842 FliG N-terminal domain FY534_08635 PF01514 Secretory protein of YscJ/FliF family FY534_08635 PF08345 Flagellar M-ring protein C-terminal FY534_08640 PF02049 Flagellar hook-basal body complex protein FliE FY534_08645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY534_08645 PF00460 Flagella basal body rod protein FY534_08650 PF00460 Flagella basal body rod protein FY534_08655 PF10431 C-terminal, D2-small domain, of ClpB protein FY534_08655 PF07724 AAA domain (Cdc48 subfamily) FY534_08660 PF00227 Proteasome subunit FY534_08665 PF02899 Phage integrase, N-terminal SAM-like domain FY534_08665 PF00589 Phage integrase family FY534_08670 PF01134 Glucose inhibited division protein A FY534_08675 PF01131 DNA topoisomerase FY534_08675 PF01396 Topoisomerase DNA binding C4 zinc finger FY534_08675 PF01751 Toprim domain FY534_08680 PF17782 DprA winged helix domain FY534_08680 PF02481 DNA recombination-mediator protein A FY534_08685 PF02629 CoA binding domain FY534_08685 PF00549 CoA-ligase FY534_08690 PF00549 CoA-ligase FY534_08690 PF08442 ATP-grasp domain FY534_08700 PF01078 Magnesium chelatase, subunit ChlI FY534_08700 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY534_08705 PF02021 Uncharacterised protein family UPF0102 FY534_08710 PF01312 FlhB HrpN YscU SpaS Family FY534_08720 PF01351 Ribonuclease HII FY534_08725 PF01926 50S ribosome-binding GTPase FY534_08730 PF01245 Ribosomal protein L19 FY534_08755 PF03061 Thioesterase superfamily FY534_08760 PF01551 Peptidase family M23 FY534_08770 PF01479 S4 domain FY534_08770 PF00849 RNA pseudouridylate synthase FY534_08775 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY534_08775 PF00753 Metallo-beta-lactamase superfamily FY534_08795 PF01746 tRNA (Guanine-1)-methyltransferase FY534_08800 PF05239 PRC-barrel domain FY534_08800 PF01782 RimM N-terminal domain FY534_08815 PF00886 Ribosomal protein S16 FY534_08820 PF02978 Signal peptide binding domain FY534_08820 PF02881 SRP54-type protein, helical bundle domain FY534_08820 PF00448 SRP54-type protein, GTPase domain FY534_08825 PF04297 Putative helix-turn-helix protein, YlxM / p13 like FY534_08830 PF00448 SRP54-type protein, GTPase domain FY534_08830 PF02881 SRP54-type protein, helical bundle domain FY534_08835 PF06470 SMC proteins Flexible Hinge Domain FY534_08835 PF02463 RecF/RecN/SMC N terminal domain FY534_08840 PF14622 Ribonuclease-III-like FY534_08840 PF00035 Double-stranded RNA binding motif FY534_08845 PF02801 Beta-ketoacyl synthase, C-terminal domain FY534_08845 PF00109 Beta-ketoacyl synthase, N-terminal domain FY534_08850 PF00550 Phosphopantetheine attachment site FY534_08860 PF00698 Acyl transferase domain FY534_08865 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY534_08865 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY534_08870 PF02504 Fatty acid synthesis protein FY534_08875 PF03061 Thioesterase superfamily FY534_08880 PF01783 Ribosomal L32p protein family FY534_08890 PF01734 Patatin-like phospholipase FY534_08895 PF01467 Cytidylyltransferase-like FY534_08910 PF01425 Amidase FY534_08915 PF00534 Glycosyl transferases group 1 FY534_08915 PF13439 Glycosyltransferase Family 4 FY534_08920 PF16363 GDP-mannose 4,6 dehydratase FY534_08925 PF02666 Phosphatidylserine decarboxylase FY534_08930 PF00269 Small, acid-soluble spore proteins, alpha/beta type FY534_08935 PF00270 DEAD/DEAH box helicase FY534_08935 PF17191 RecG wedge domain FY534_08935 PF00271 Helicase conserved C-terminal domain FY534_08940 PF13684 Dihydroxyacetone kinase family FY534_08940 PF02734 DAK2 domain FY534_08945 PF03780 Asp23 family, cell envelope-related function FY534_08950 PF00830 Ribosomal L28 family FY534_08955 PF08183 Stage V sporulation protein family FY534_08960 PF00834 Ribulose-phosphate 3 epimerase family FY534_08965 PF03193 RsgA GTPase FY534_08965 PF16745 RsgA N-terminal domain FY534_08970 PF03793 PASTA domain FY534_08970 PF00069 Protein kinase domain FY534_08980 PF04055 Radical SAM superfamily FY534_08985 PF01029 NusB family FY534_08985 PF01189 16S rRNA methyltransferase RsmB/F FY534_08990 PF00551 Formyl transferase FY534_08990 PF02911 Formyl transferase, C-terminal domain FY534_08995 PF01327 Polypeptide deformylase FY534_09000 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY534_09000 PF04851 Type III restriction enzyme, res subunit FY534_09000 PF18074 Primosomal protein N C-terminal domain FY534_09000 PF00271 Helicase conserved C-terminal domain FY534_09000 PF17764 3′ DNA-binding domain (3′BD) FY534_09005 PF04127 DNA / pantothenate metabolism flavoprotein FY534_09005 PF02441 Flavoprotein FY534_09010 PF01192 RNA polymerase Rpb6 FY534_09015 PF00625 Guanylate kinase FY534_09020 PF04025 Domain of unknown function (DUF370) FY534_09025 PF00689 Cation transporting ATPase, C-terminus FY534_09025 PF00690 Cation transporter/ATPase, N-terminus FY534_09030 PF05670 NFACT protein RNA binding domain FY534_09040 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FY534_09040 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FY534_09045 PF00156 Phosphoribosyl transferase domain FY534_09050 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY534_09055 PF02142 MGS-like domain FY534_09055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY534_09055 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY534_09060 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY534_09060 PF00117 Glutamine amidotransferase class-I FY534_09065 PF01979 Amidohydrolase family FY534_09070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY534_09070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY534_09075 PF00156 Phosphoribosyl transferase domain FY534_09080 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FY534_09095 PF00849 RNA pseudouridylate synthase FY534_09095 PF01479 S4 domain FY534_09100 PF01252 Signal peptidase (SPase) II FY534_09105 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) FY534_09115 PF05103 DivIVA protein FY534_09130 PF01168 Alanine racemase, N-terminal domain FY534_09135 PF02578 Multi-copper polyphenol oxidoreductase laccase FY534_09140 PF05239 PRC-barrel domain FY534_09145 PF04542 Sigma-70 region 2 FY534_09145 PF04539 Sigma-70 region 3 FY534_09145 PF04545 Sigma-70, region 4 FY534_09150 PF04545 Sigma-70, region 4 FY534_09150 PF04542 Sigma-70 region 2 FY534_09155 PF03419 Sporulation factor SpoIIGA FY534_09160 PF12327 FtsZ family, C-terminal domain FY534_09160 PF00091 Tubulin/FtsZ family, GTPase domain FY534_09165 PF02491 SHS2 domain inserted in FTSA FY534_09170 PF06947 Protein of unknown function (DUF1290) FY534_09185 PF08478 POTRA domain, FtsQ-type FY534_09185 PF03799 Cell division protein FtsQ FY534_09190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY534_09195 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY534_09195 PF01565 FAD binding domain FY534_09200 PF03033 Glycosyltransferase family 28 N-terminal domain FY534_09200 PF04101 Glycosyltransferase family 28 C-terminal domain FY534_09205 PF01098 Cell cycle protein FY534_09210 PF02875 Mur ligase family, glutamate ligase domain FY534_09210 PF08245 Mur ligase middle domain FY534_09215 PF00953 Glycosyl transferase family 4 FY534_09220 PF01225 Mur ligase family, catalytic domain FY534_09220 PF08245 Mur ligase middle domain FY534_09220 PF02875 Mur ligase family, glutamate ligase domain FY534_09225 PF03793 PASTA domain FY534_09225 PF00905 Penicillin binding protein transpeptidase domain FY534_09225 PF03717 Penicillin-binding Protein dimerisation domain FY534_09235 PF01795 MraW methylase family FY534_09240 PF02381 MraZ protein, putative antitoxin-like FY534_09245 PF10079 Bacillithiol biosynthesis BshC FY534_09250 PF01039 Carboxyl transferase domain FY534_09255 PF00378 Enoyl-CoA hydratase/isomerase FY534_09260 PF00682 HMGL-like FY534_09265 PF00364 Biotin-requiring enzyme FY534_09270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY534_09270 PF02785 Biotin carboxylase C-terminal domain FY534_09270 PF00289 Biotin carboxylase, N-terminal domain FY534_09300 PF02926 THUMP domain FY534_09300 PF02568 Thiamine biosynthesis protein (ThiI) FY534_09305 PF00266 Aminotransferase class-V FY534_09310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY534_09310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY534_09320 PF00574 Clp protease FY534_09350 PF06133 Control of competence regulator ComK, YlbF/YmcA FY534_09355 PF06949 Protein of unknown function (DUF1292) FY534_09360 PF07690 Major Facilitator Superfamily FY534_09365 PF00199 Catalase FY534_09365 PF06628 Catalase-related immune-responsive FY534_09370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY534_09370 PF13378 Enolase C-terminal domain-like FY534_09385 PF00535 Glycosyl transferase family 2 FY534_09400 PF13439 Glycosyltransferase Family 4 FY534_09400 PF00534 Glycosyl transferases group 1 FY534_09410 PF00989 PAS fold FY534_09410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_09410 PF08447 PAS fold FY534_09410 PF00512 His Kinase A (phospho-acceptor) domain FY534_09415 PF01263 Aldose 1-epimerase FY534_09420 PF00083 Sugar (and other) transporter FY534_09425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY534_09425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY534_09430 PF01261 Xylose isomerase-like TIM barrel FY534_09435 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY534_09435 PF00480 ROK family FY534_09445 PF07690 Major Facilitator Superfamily FY534_09450 PF02515 CoA-transferase family III FY534_09455 PF00378 Enoyl-CoA hydratase/isomerase FY534_09465 PF00392 Bacterial regulatory proteins, gntR family FY534_09465 PF07729 FCD domain FY534_09470 PF00005 ABC transporter FY534_09470 PF00664 ABC transporter transmembrane region FY534_09475 PF00356 Bacterial regulatory proteins, lacI family FY534_09480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY534_09480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY534_09485 PF07690 Major Facilitator Superfamily FY534_09490 PF02796 Helix-turn-helix domain of resolvase FY534_09490 PF00665 Integrase core domain FY534_09495 PF01695 IstB-like ATP binding protein FY534_09505 PF07690 Major Facilitator Superfamily FY534_09515 PF13817 IS66 C-terminal element FY534_09515 PF03050 Transposase IS66 family FY534_09515 PF13005 zinc-finger binding domain of transposase IS66 FY534_09515 PF13007 Transposase C of IS166 homeodomain FY534_09545 PF00589 Phage integrase family FY534_09545 PF02899 Phage integrase, N-terminal SAM-like domain FY534_09570 PF01070 FMN-dependent dehydrogenase FY534_09580 PF00266 Aminotransferase class-V FY534_09585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY534_09585 PF01842 ACT domain FY534_09585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY534_09590 PF02634 FdhD/NarQ family FY534_09600 PF00384 Molybdopterin oxidoreductase FY534_09600 PF01568 Molydopterin dinucleotide binding domain FY534_09600 PF12838 4Fe-4S dicluster domain FY534_09600 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY534_09600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY534_09605 PF01842 ACT domain FY534_09605 PF00696 Amino acid kinase family FY534_09605 PF13840 ACT domain FY534_09610 PF00206 Lyase FY534_09610 PF14698 Argininosuccinate lyase C-terminal FY534_09615 PF00764 Arginosuccinate synthase FY534_09620 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY534_09620 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY534_09625 PF01493 GXGXG motif FY534_09625 PF01645 Conserved region in glutamate synthase FY534_09625 PF04898 Glutamate synthase central domain FY534_09625 PF00310 Glutamine amidotransferases class-II FY534_09630 PF00583 Acetyltransferase (GNAT) family FY534_09635 PF00202 Aminotransferase class-III FY534_09640 PF00696 Amino acid kinase family FY534_09645 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY534_09645 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY534_09660 PF04012 PspA/IM30 family FY534_09665 PF01906 Putative heavy-metal-binding FY534_09680 PF00425 chorismate binding enzyme FY534_09680 PF04715 Anthranilate synthase component I, N terminal region FY534_09685 PF00117 Glutamine amidotransferase class-I FY534_09740 PF00899 ThiF family FY534_09745 PF02581 Thiamine monophosphate synthase FY534_09750 PF01266 FAD dependent oxidoreductase FY534_09755 PF01266 FAD dependent oxidoreductase FY534_09755 PF05690 Thiazole biosynthesis protein ThiG FY534_09765 PF05690 Thiazole biosynthesis protein ThiG FY534_09785 PF02626 Carboxyltransferase domain, subdomain A and B FY534_09790 PF02682 Carboxyltransferase domain, subdomain C and D FY534_09805 PF01614 Bacterial transcriptional regulator FY534_09805 PF09339 IclR helix-turn-helix domain FY534_09820 PF12804 MobA-like NTP transferase domain FY534_09820 PF00132 Bacterial transferase hexapeptide (six repeats) FY534_09825 PF00483 Nucleotidyl transferase FY534_09840 PF14579 Helix-hairpin-helix motif FY534_09840 PF02811 PHP domain FY534_09840 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY534_09840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY534_09840 PF00929 Exonuclease FY534_09860 PF03060 Nitronate monooxygenase FY534_09865 PF03458 UPF0126 domain FY534_09870 PF00171 Aldehyde dehydrogenase family FY534_09875 PF13520 Amino acid permease FY534_09880 PF00392 Bacterial regulatory proteins, gntR family FY534_09880 PF07729 FCD domain FY534_09885 PF02754 Cysteine-rich domain FY534_09890 PF11870 Domain of unknown function (DUF3390) FY534_09890 PF13183 4Fe-4S dicluster domain FY534_09890 PF02589 LUD domain FY534_09895 PF02589 LUD domain FY534_09900 PF08220 DeoR-like helix-turn-helix domain FY534_09900 PF00455 DeoR C terminal sensor domain FY534_09905 PF01261 Xylose isomerase-like TIM barrel FY534_09915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY534_09915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY534_09920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY534_09920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY534_09925 PF05336 L-rhamnose mutarotase FY534_09940 PF01593 Flavin containing amine oxidoreductase FY534_09955 PF13249 Squalene-hopene cyclase N-terminal domain FY534_09955 PF13243 Squalene-hopene cyclase C-terminal domain FY534_09960 PF01370 NAD dependent epimerase/dehydratase family FY534_09970 PF06463 Molybdenum Cofactor Synthesis C FY534_09970 PF04055 Radical SAM superfamily FY534_09975 PF01070 FMN-dependent dehydrogenase FY534_09985 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase FY534_09985 PF00534 Glycosyl transferases group 1 FY534_10000 PF08495 FIST N domain FY534_10000 PF00563 EAL domain FY534_10000 PF00990 Diguanylate cyclase, GGDEF domain FY534_10000 PF10442 FIST C domain FY534_10015 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FY534_10015 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FY534_10015 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FY534_10020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY534_10025 PF00293 NUDIX domain FY534_10035 PF02681 Divergent PAP2 family FY534_10040 PF05343 M42 glutamyl aminopeptidase FY534_10045 PF08827 Domain of unknown function (DUF1805) FY534_10055 PF09335 SNARE associated Golgi protein FY534_10060 PF01966 HD domain FY534_10065 PF01521 Iron-sulphur cluster biosynthesis FY534_10070 PF00578 AhpC/TSA family FY534_10075 PF01276 Orn/Lys/Arg decarboxylase, major domain FY534_10075 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FY534_10080 PF08741 YwhD family FY534_10095 PF00155 Aminotransferase class I and II FY534_10100 PF01098 Cell cycle protein FY534_10115 PF01098 Cell cycle protein FY534_10120 PF00258 Flavodoxin FY534_10120 PF00753 Metallo-beta-lactamase superfamily FY534_10125 PF13185 GAF domain FY534_10130 PF08353 Domain of unknown function (DUF1727) FY534_10130 PF08245 Mur ligase middle domain FY534_10135 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY534_10150 PF03061 Thioesterase superfamily FY534_10155 PF01636 Phosphotransferase enzyme family FY534_10160 PF00501 AMP-binding enzyme FY534_10160 PF13193 AMP-binding enzyme C-terminal domain FY534_10165 PF02308 MgtC family FY534_10170 PF00288 GHMP kinases N terminal domain FY534_10170 PF08544 GHMP kinases C terminal FY534_10175 PF00291 Pyridoxal-phosphate dependent enzyme FY534_10180 PF12706 Beta-lactamase superfamily domain FY534_10185 PF07690 Major Facilitator Superfamily FY534_10190 PF00899 ThiF family FY534_10195 PF05193 Peptidase M16 inactive domain FY534_10195 PF00675 Insulinase (Peptidase family M16) FY534_10200 PF05193 Peptidase M16 inactive domain FY534_10205 PF00037 4Fe-4S binding domain FY534_10210 PF07690 Major Facilitator Superfamily FY534_10215 PF02310 B12 binding domain FY534_10215 PF01642 Methylmalonyl-CoA mutase FY534_10220 PF00440 Bacterial regulatory proteins, tetR family FY534_10225 PF00905 Penicillin binding protein transpeptidase domain FY534_10225 PF03717 Penicillin-binding Protein dimerisation domain FY534_10230 PF01261 Xylose isomerase-like TIM barrel FY534_10240 PF10057 Uncharacterized conserved protein (DUF2294) FY534_10245 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) FY534_10250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY534_10250 PF00361 Proton-conducting membrane transporter FY534_10255 PF02770 Acyl-CoA dehydrogenase, middle domain FY534_10255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY534_10255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY534_10260 PF00108 Thiolase, N-terminal domain FY534_10260 PF02803 Thiolase, C-terminal domain FY534_10265 PF00378 Enoyl-CoA hydratase/isomerase FY534_10265 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY534_10265 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY534_10270 PF01230 HIT domain FY534_10285 PF01569 PAP2 superfamily FY534_10300 PF00271 Helicase conserved C-terminal domain FY534_10300 PF00176 SNF2 family N-terminal domain FY534_10300 PF12419 SNF2 Helicase protein FY534_10305 PF14034 Sporulation protein YtrH FY534_10320 PF01321 Creatinase/Prolidase N-terminal domain FY534_10320 PF00557 Metallopeptidase family M24 FY534_10325 PF01613 Flavin reductase like domain FY534_10330 PF00378 Enoyl-CoA hydratase/isomerase FY534_10335 PF13520 Amino acid permease FY534_10345 PF02401 LytB protein FY534_10350 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain FY534_10350 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY534_10350 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY534_10355 PF00459 Inositol monophosphatase family FY534_10360 PF00258 Flavodoxin FY534_10360 PF00667 FAD binding domain FY534_10360 PF00175 Oxidoreductase NAD-binding domain FY534_10360 PF00067 Cytochrome P450 FY534_10365 PF00440 Bacterial regulatory proteins, tetR family FY534_10370 PF10415 Fumarase C C-terminus FY534_10370 PF00206 Lyase FY534_10375 PF00221 Aromatic amino acid lyase FY534_10385 PF07676 WD40-like Beta Propeller Repeat FY534_10385 PF00326 Prolyl oligopeptidase family FY534_10395 PF00766 Electron transfer flavoprotein FAD-binding domain FY534_10395 PF01012 Electron transfer flavoprotein domain FY534_10400 PF01012 Electron transfer flavoprotein domain FY534_10405 PF08359 YsiA-like protein, C-terminal region FY534_10405 PF00440 Bacterial regulatory proteins, tetR family FY534_10415 PF02082 Transcriptional regulator FY534_10420 PF00355 Rieske [2Fe-2S] domain FY534_10425 PF01458 Uncharacterized protein family (UPF0051) FY534_10430 PF01592 NifU-like N terminal domain FY534_10435 PF00266 Aminotransferase class-V FY534_10440 PF01458 Uncharacterized protein family (UPF0051) FY534_10445 PF00005 ABC transporter FY534_10450 PF01883 Iron-sulfur cluster assembly protein FY534_10455 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY534_10455 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY534_10470 PF08281 Sigma-70, region 4 FY534_10470 PF04542 Sigma-70 region 2 FY534_10475 PF01180 Dihydroorotate dehydrogenase FY534_10480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY534_10480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY534_10490 PF02261 Aspartate decarboxylase FY534_10495 PF01979 Amidohydrolase family FY534_10500 PF01227 GTP cyclohydrolase I FY534_10510 PF00440 Bacterial regulatory proteins, tetR family FY534_10510 PF18665 Tetracyclin repressor-like, C-terminal domain FY534_10520 PF04542 Sigma-70 region 2 FY534_10520 PF04545 Sigma-70, region 4 FY534_10535 PF13180 PDZ domain FY534_10540 PF00350 Dynamin family FY534_10545 PF12631 MnmE helical domain FY534_10545 PF01926 50S ribosome-binding GTPase FY534_10545 PF10396 GTP-binding protein TrmE N-terminus FY534_10550 PF05343 M42 glutamyl aminopeptidase FY534_10570 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY534_10570 PF02152 Dihydroneopterin aldolase FY534_10575 PF00535 Glycosyl transferase family 2 FY534_10580 PF03631 Virulence factor BrkB FY534_10585 PF00849 RNA pseudouridylate synthase FY534_10590 PF01521 Iron-sulphur cluster biosynthesis FY534_10590 PF01106 NifU-like domain FY534_10595 PF04070 Domain of unknown function (DUF378) FY534_10605 PF00696 Amino acid kinase family FY534_10605 PF00583 Acetyltransferase (GNAT) family FY534_10615 PF00580 UvrD/REP helicase N-terminal domain FY534_10615 PF13361 UvrD-like helicase C-terminal domain FY534_10630 PF13193 AMP-binding enzyme C-terminal domain FY534_10630 PF00501 AMP-binding enzyme FY534_10635 PF03734 L,D-transpeptidase catalytic domain FY534_10640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY534_10640 PF02770 Acyl-CoA dehydrogenase, middle domain FY534_10640 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY534_10645 PF07690 Major Facilitator Superfamily FY534_10650 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FY534_10655 PF00581 Rhodanese-like domain FY534_10660 PF00106 short chain dehydrogenase FY534_10685 PF00905 Penicillin binding protein transpeptidase domain FY534_10685 PF03717 Penicillin-binding Protein dimerisation domain FY534_10690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY534_10690 PF03466 LysR substrate binding domain FY534_10695 PF00440 Bacterial regulatory proteins, tetR family FY534_10700 PF02779 Transketolase, pyrimidine binding domain FY534_10700 PF02780 Transketolase, C-terminal domain FY534_10700 PF00456 Transketolase, thiamine diphosphate binding domain FY534_10715 PF00005 ABC transporter FY534_10720 PF09819 ABC-type cobalt transport system, permease component FY534_10730 PF00892 EamA-like transporter family FY534_10735 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY534_10735 PF01502 Phosphoribosyl-AMP cyclohydrolase FY534_10740 PF00977 Histidine biosynthesis protein FY534_10745 PF00977 Histidine biosynthesis protein FY534_10755 PF00475 Imidazoleglycerol-phosphate dehydratase FY534_10760 PF00815 Histidinol dehydrogenase FY534_10765 PF01634 ATP phosphoribosyltransferase FY534_10770 PF13393 Histidyl-tRNA synthetase FY534_10775 PF01568 Molydopterin dinucleotide binding domain FY534_10775 PF00384 Molybdopterin oxidoreductase FY534_10775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY534_10780 PF13247 4Fe-4S dicluster domain FY534_10790 PF03466 LysR substrate binding domain FY534_10790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY534_10795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY534_10795 PF03466 LysR substrate binding domain FY534_10815 PF04542 Sigma-70 region 2 FY534_10815 PF08281 Sigma-70, region 4 FY534_10820 PF16177 Acetyl-coenzyme A synthetase N-terminus FY534_10820 PF00501 AMP-binding enzyme FY534_10820 PF13193 AMP-binding enzyme C-terminal domain FY534_10825 PF00171 Aldehyde dehydrogenase family FY534_10835 PF00378 Enoyl-CoA hydratase/isomerase FY534_10840 PF00378 Enoyl-CoA hydratase/isomerase FY534_10850 PF14535 AMP-binding enzyme C-terminal domain FY534_10850 PF00501 AMP-binding enzyme FY534_10855 PF01883 Iron-sulfur cluster assembly protein FY534_10870 PF05138 Phenylacetic acid catabolic protein FY534_10875 PF00440 Bacterial regulatory proteins, tetR family FY534_10875 PF17932 Tetracyclin repressor-like, C-terminal domain FY534_10880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY534_10880 PF00364 Biotin-requiring enzyme FY534_10880 PF02817 e3 binding domain FY534_10885 PF02779 Transketolase, pyrimidine binding domain FY534_10885 PF02780 Transketolase, C-terminal domain FY534_10890 PF00676 Dehydrogenase E1 component FY534_10895 PF00155 Aminotransferase class I and II FY534_10900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY534_10905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY534_10910 PF07722 Peptidase C26 FY534_10915 PF13520 Amino acid permease FY534_10920 PF04551 GcpE protein FY534_10925 PF01791 DeoC/LacD family aldolase FY534_10935 PF00202 Aminotransferase class-III FY534_10940 PF00953 Glycosyl transferase family 4 FY534_10945 PF01170 Putative RNA methylase family UPF0020 FY534_10945 PF02926 THUMP domain FY534_10950 PF00694 Aconitase C-terminal domain FY534_10950 PF00330 Aconitase family (aconitate hydratase) FY534_10965 PF00465 Iron-containing alcohol dehydrogenase FY534_10990 PF02545 Maf-like protein FY534_10995 PF01053 Cys/Met metabolism PLP-dependent enzyme FY534_11005 PF11871 Domain of unknown function (DUF3391) FY534_11005 PF01966 HD domain FY534_11010 PF04241 Protein of unknown function (DUF423) FY534_11025 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY534_11035 PF02146 Sir2 family FY534_11040 PF00583 Acetyltransferase (GNAT) family FY534_11040 PF13607 Succinyl-CoA ligase like flavodoxin domain FY534_11040 PF13380 CoA binding domain FY534_11045 PF02073 Thermophilic metalloprotease (M29) FY534_11050 PF00990 Diguanylate cyclase, GGDEF domain FY534_11050 PF03707 Bacterial signalling protein N terminal repeat FY534_11050 PF00563 EAL domain FY534_11055 PF02585 GlcNAc-PI de-N-acetylase FY534_11075 PF01476 LysM domain FY534_11075 PF00877 NlpC/P60 family FY534_11080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY534_11080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY534_11100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY534_11100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY534_11135 PF02675 S-adenosylmethionine decarboxylase FY534_11140 PF01694 Rhomboid family FY534_11145 PF00534 Glycosyl transferases group 1 FY534_11155 PF02687 FtsX-like permease family FY534_11155 PF12704 MacB-like periplasmic core domain FY534_11180 PF00571 CBS domain FY534_11185 PF00487 Fatty acid desaturase FY534_11190 PF00269 Small, acid-soluble spore proteins, alpha/beta type FY534_11195 PF00285 Citrate synthase, C-terminal domain FY534_11205 PF02659 Putative manganese efflux pump FY534_11210 PF02875 Mur ligase family, glutamate ligase domain FY534_11210 PF08245 Mur ligase middle domain FY534_11215 PF00694 Aconitase C-terminal domain FY534_11220 PF00330 Aconitase family (aconitate hydratase) FY534_11225 PF00180 Isocitrate/isopropylmalate dehydrogenase FY534_11230 PF00682 HMGL-like FY534_11230 PF08502 LeuA allosteric (dimerisation) domain FY534_11235 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY534_11235 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY534_11265 PF01266 FAD dependent oxidoreductase FY534_11275 PF00294 pfkB family carbohydrate kinase FY534_11280 PF00128 Alpha amylase, catalytic domain FY534_11285 PF00528 Binding-protein-dependent transport system inner membrane component FY534_11290 PF00528 Binding-protein-dependent transport system inner membrane component FY534_11295 PF01547 Bacterial extracellular solute-binding protein FY534_11300 PF00356 Bacterial regulatory proteins, lacI family FY534_11305 PF13520 Amino acid permease FY534_11310 PF09335 SNARE associated Golgi protein FY534_11315 PF00474 Sodium:solute symporter family FY534_11325 PF01522 Polysaccharide deacetylase FY534_11330 PF01476 LysM domain FY534_11330 PF00704 Glycosyl hydrolases family 18 FY534_11335 PF13426 PAS domain FY534_11335 PF13188 PAS domain FY534_11335 PF00989 PAS fold FY534_11335 PF00512 His Kinase A (phospho-acceptor) domain FY534_11335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_11355 PF08447 PAS fold FY534_11355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_11355 PF00989 PAS fold FY534_11355 PF00512 His Kinase A (phospho-acceptor) domain FY534_11385 PF03323 Bacillus/Clostridium GerA spore germination protein FY534_11390 PF00704 Glycosyl hydrolases family 18 FY534_11390 PF01476 LysM domain FY534_11405 PF00664 ABC transporter transmembrane region FY534_11405 PF00005 ABC transporter FY534_11410 PF00005 ABC transporter FY534_11410 PF00664 ABC transporter transmembrane region FY534_11415 PF08279 HTH domain FY534_11415 PF02829 3H domain FY534_11420 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FY534_11425 PF03553 Na+/H+ antiporter family FY534_11430 PF04070 Domain of unknown function (DUF378) FY534_11440 PF00860 Permease family FY534_11450 PF00528 Binding-protein-dependent transport system inner membrane component FY534_11455 PF12911 N-terminal TM domain of oligopeptide transport permease C FY534_11455 PF00528 Binding-protein-dependent transport system inner membrane component FY534_11460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY534_11465 PF00005 ABC transporter FY534_11465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY534_11470 PF00005 ABC transporter FY534_11470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY534_11475 PF07690 Major Facilitator Superfamily FY534_11480 PF00486 Transcriptional regulatory protein, C terminal FY534_11480 PF00072 Response regulator receiver domain FY534_11485 PF18698 Histidine kinase sensor domain FY534_11485 PF00512 His Kinase A (phospho-acceptor) domain FY534_11485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_11485 PF00672 HAMP domain FY534_11495 PF18719 ArlS sensor domain FY534_11495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_11495 PF00512 His Kinase A (phospho-acceptor) domain FY534_11500 PF00486 Transcriptional regulatory protein, C terminal FY534_11500 PF00072 Response regulator receiver domain FY534_11505 PF03466 LysR substrate binding domain FY534_11505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY534_11510 PF00709 Adenylosuccinate synthetase FY534_11520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY534_11520 PF02770 Acyl-CoA dehydrogenase, middle domain FY534_11520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY534_11525 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY534_11525 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY534_11530 PF04198 Putative sugar-binding domain FY534_11540 PF00293 NUDIX domain FY534_11550 PF02541 Ppx/GppA phosphatase family FY534_11555 PF00485 Phosphoribulokinase / Uridine kinase family FY534_11565 PF02628 Cytochrome oxidase assembly protein FY534_11570 PF01040 UbiA prenyltransferase family FY534_11575 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY534_11580 PF00510 Cytochrome c oxidase subunit III FY534_11585 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY534_11590 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY534_11600 PF00171 Aldehyde dehydrogenase family FY534_11605 PF00990 Diguanylate cyclase, GGDEF domain FY534_11605 PF00563 EAL domain FY534_11605 PF08448 PAS fold FY534_11610 PF16363 GDP-mannose 4,6 dehydratase FY534_11615 PF00288 GHMP kinases N terminal domain FY534_11615 PF08544 GHMP kinases C terminal FY534_11615 PF10509 Galactokinase galactose-binding signature FY534_11620 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FY534_11620 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FY534_11625 PF02254 TrkA-N domain FY534_11625 PF02080 TrkA-C domain FY534_11625 PF00999 Sodium/hydrogen exchanger family FY534_11630 PF02254 TrkA-N domain FY534_11630 PF02080 TrkA-C domain FY534_11630 PF00999 Sodium/hydrogen exchanger family FY534_11635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_11635 PF00672 HAMP domain FY534_11635 PF00512 His Kinase A (phospho-acceptor) domain FY534_11640 PF00486 Transcriptional regulatory protein, C terminal FY534_11640 PF00072 Response regulator receiver domain FY534_11645 PF13529 Peptidase_C39 like family FY534_11650 PF00733 Asparagine synthase FY534_11650 PF13537 Glutamine amidotransferase domain FY534_11660 PF00005 ABC transporter FY534_11670 PF00528 Binding-protein-dependent transport system inner membrane component FY534_11725 PF13673 Acetyltransferase (GNAT) domain FY534_11730 PF00753 Metallo-beta-lactamase superfamily FY534_11735 PF00248 Aldo/keto reductase family FY534_11740 PF00248 Aldo/keto reductase family FY534_11755 PF16875 Glycosyl hydrolase family 36 N-terminal domain FY534_11755 PF16874 Glycosyl hydrolase family 36 C-terminal domain FY534_11760 PF00528 Binding-protein-dependent transport system inner membrane component FY534_11765 PF01547 Bacterial extracellular solute-binding protein FY534_11770 PF00528 Binding-protein-dependent transport system inner membrane component FY534_11775 PF00356 Bacterial regulatory proteins, lacI family FY534_11780 PF01545 Cation efflux family FY534_11785 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY534_11785 PF04552 Sigma-54, DNA binding domain FY534_11785 PF04963 Sigma-54 factor, core binding domain FY534_11805 PF14718 Soluble lytic murein transglycosylase L domain FY534_11805 PF01464 Transglycosylase SLT domain FY534_11810 PF01121 Dephospho-CoA kinase FY534_11815 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY534_11815 PF06827 Zinc finger found in FPG and IleRS FY534_11815 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY534_11820 PF00476 DNA polymerase family A FY534_11820 PF01367 5'-3' exonuclease, C-terminal SAM fold FY534_11820 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY534_11825 PF00056 lactate/malate dehydrogenase, NAD binding domain FY534_11825 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY534_11830 PF00180 Isocitrate/isopropylmalate dehydrogenase FY534_11835 PF00579 tRNA synthetases class I (W and Y) FY534_11840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY534_11840 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY534_11850 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY534_11850 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY534_11855 PF00391 PEP-utilising enzyme, mobile domain FY534_11855 PF00224 Pyruvate kinase, barrel domain FY534_11855 PF02887 Pyruvate kinase, alpha/beta domain FY534_11860 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY534_11865 PF01039 Carboxyl transferase domain FY534_11865 PF17848 Acetyl-coA carboxylase zinc finger domain FY534_11875 PF04608 Phosphatidylglycerophosphatase A FY534_11880 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY534_11880 PF01336 OB-fold nucleic acid binding domain FY534_11880 PF14579 Helix-hairpin-helix motif FY534_11880 PF02811 PHP domain FY534_11880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY534_11885 PF07085 DRTGG domain FY534_11885 PF00392 Bacterial regulatory proteins, gntR family FY534_11885 PF03061 Thioesterase superfamily FY534_11885 PF00571 CBS domain FY534_11890 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FY534_11890 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FY534_11895 PF13360 PQQ-like domain FY534_11905 PF00291 Pyridoxal-phosphate dependent enzyme FY534_11910 PF01475 Ferric uptake regulator family FY534_11915 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY534_11915 PF00578 AhpC/TSA family FY534_11920 PF00578 AhpC/TSA family FY534_11925 PF00085 Thioredoxin FY534_11930 PF08534 Redoxin FY534_11935 PF01546 Peptidase family M20/M25/M40 FY534_11935 PF07687 Peptidase dimerisation domain FY534_11940 PF01316 Arginine repressor, DNA binding domain FY534_11940 PF02863 Arginine repressor, C-terminal domain FY534_11945 PF10502 Signal peptidase, peptidase S26 FY534_11955 PF11588 Protein of unknown function (DUF3243) FY534_11970 PF06508 Queuosine biosynthesis protein QueC FY534_11980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY534_11980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY534_11980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY534_11985 PF08264 Anticodon-binding domain of tRNA FY534_11985 PF00133 tRNA synthetases class I (I, L, M and V) FY534_11995 PF02073 Thermophilic metalloprotease (M29) FY534_12000 PF07690 Major Facilitator Superfamily FY534_12005 PF03717 Penicillin-binding Protein dimerisation domain FY534_12005 PF00905 Penicillin binding protein transpeptidase domain FY534_12005 PF03793 PASTA domain FY534_12010 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY534_12015 PF00925 GTP cyclohydrolase II FY534_12015 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY534_12020 PF00677 Lumazine binding domain FY534_12025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY534_12025 PF01872 RibD C-terminal domain FY534_12045 PF00132 Bacterial transferase hexapeptide (six repeats) FY534_12055 PF01546 Peptidase family M20/M25/M40 FY534_12055 PF07687 Peptidase dimerisation domain FY534_12060 PF06165 Glycosyltransferase family 36 FY534_12060 PF10091 Putative glucoamylase FY534_12060 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY534_12065 PF10091 Putative glucoamylase FY534_12065 PF06165 Glycosyltransferase family 36 FY534_12065 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY534_12070 PF08222 CodY helix-turn-helix domain FY534_12070 PF06018 CodY GAF-like domain FY534_12075 PF01209 ubiE/COQ5 methyltransferase family FY534_12080 PF01371 Trp repressor protein FY534_12115 PF03129 Anticodon binding domain FY534_12115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY534_12115 PF09180 Prolyl-tRNA synthetase, C-terminal FY534_12125 PF02754 Cysteine-rich domain FY534_12125 PF13183 4Fe-4S dicluster domain FY534_12130 PF01565 FAD binding domain FY534_12130 PF02913 FAD linked oxidases, C-terminal domain FY534_12135 PF09339 IclR helix-turn-helix domain FY534_12135 PF01614 Bacterial transcriptional regulator FY534_12140 PF02652 L-lactate permease FY534_12150 PF00355 Rieske [2Fe-2S] domain FY534_12160 PF00403 Heavy-metal-associated domain FY534_12160 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY534_12160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY534_12180 PF03109 ABC1 family FY534_12185 PF16884 N-terminal domain of oxidoreductase FY534_12185 PF00107 Zinc-binding dehydrogenase FY534_12190 PF00083 Sugar (and other) transporter FY534_12195 PF00083 Sugar (and other) transporter FY534_12200 PF00535 Glycosyl transferase family 2 FY534_12215 PF05227 CHASE3 domain FY534_12215 PF00672 HAMP domain FY534_12215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY534_12220 PF00578 AhpC/TSA family FY534_12220 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY534_12225 PF12146 Serine aminopeptidase, S33 FY534_12230 PF07722 Peptidase C26 FY534_12235 PF05221 S-adenosyl-L-homocysteine hydrolase FY534_12235 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY534_12240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY534_12240 PF02436 Conserved carboxylase domain FY534_12240 PF00682 HMGL-like FY534_12240 PF00364 Biotin-requiring enzyme FY534_12240 PF00289 Biotin carboxylase, N-terminal domain FY534_12240 PF02785 Biotin carboxylase C-terminal domain FY534_12245 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system FY534_12250 PF00842 Alanine racemase, C-terminal domain FY534_12250 PF01168 Alanine racemase, N-terminal domain FY534_12255 PF09286 Pro-kumamolisin, activation domain FY534_12255 PF04151 Bacterial pre-peptidase C-terminal domain FY534_12265 PF00072 Response regulator receiver domain FY534_12265 PF00196 Bacterial regulatory proteins, luxR family FY534_12270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_12270 PF00672 HAMP domain FY534_12270 PF07730 Histidine kinase FY534_12295 PF03853 YjeF-related protein N-terminus FY534_12295 PF01256 Carbohydrate kinase FY534_12300 PF01648 4'-phosphopantetheinyl transferase superfamily FY534_12315 PF00557 Metallopeptidase family M24 FY534_12320 PF00171 Aldehyde dehydrogenase family FY534_12325 PF00465 Iron-containing alcohol dehydrogenase FY534_12360 PF02548 Ketopantoate hydroxymethyltransferase FY534_12365 PF02569 Pantoate-beta-alanine ligase FY534_12375 PF08378 Nuclease-related domain FY534_12380 PF00106 short chain dehydrogenase FY534_12390 PF01645 Conserved region in glutamate synthase FY534_12410 PF00005 ABC transporter FY534_12410 PF08402 TOBE domain FY534_12415 PF00528 Binding-protein-dependent transport system inner membrane component FY534_12425 PF00483 Nucleotidyl transferase FY534_12425 PF01050 Mannose-6-phosphate isomerase FY534_12455 PF07690 Major Facilitator Superfamily FY534_12460 PF07739 TipAS antibiotic-recognition domain FY534_12460 PF13411 MerR HTH family regulatory protein FY534_12465 PF00912 Transglycosylase FY534_12465 PF00905 Penicillin binding protein transpeptidase domain FY534_12470 PF00768 D-alanyl-D-alanine carboxypeptidase FY534_12475 PF07301 Protein of unknown function (DUF1453) FY534_12480 PF03176 MMPL family FY534_12485 PF03176 MMPL family FY534_12500 PF01471 Putative peptidoglycan binding domain FY534_12500 PF07486 Cell Wall Hydrolase FY534_12505 PF01566 Natural resistance-associated macrophage protein FY534_12515 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY534_12515 PF02742 Iron dependent repressor, metal binding and dimerisation domain FY534_12530 PF00528 Binding-protein-dependent transport system inner membrane component FY534_12535 PF00528 Binding-protein-dependent transport system inner membrane component FY534_12545 PF00480 ROK family FY534_12545 PF01047 MarR family FY534_12550 PF13426 PAS domain FY534_12550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_12550 PF00512 His Kinase A (phospho-acceptor) domain FY534_12550 PF13188 PAS domain FY534_12550 PF00989 PAS fold FY534_12565 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY534_12575 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY534_12580 PF04321 RmlD substrate binding domain FY534_12585 PF16363 GDP-mannose 4,6 dehydratase FY534_12590 PF00483 Nucleotidyl transferase FY534_12605 PF03275 UDP-galactopyranose mutase FY534_12610 PF00005 ABC transporter FY534_12610 PF14524 Wzt C-terminal domain FY534_12615 PF01061 ABC-2 type transporter FY534_12620 PF00535 Glycosyl transferase family 2 FY534_12625 PF02397 Bacterial sugar transferase FY534_12630 PF04715 Anthranilate synthase component I, N terminal region FY534_12630 PF00425 chorismate binding enzyme FY534_12640 PF13185 GAF domain FY534_12640 PF00990 Diguanylate cyclase, GGDEF domain FY534_12660 PF00563 EAL domain FY534_12660 PF00990 Diguanylate cyclase, GGDEF domain FY534_12660 PF08447 PAS fold FY534_12660 PF08448 PAS fold FY534_12670 PF13457 GW (Gly-Tryp) dipeptide domain FY534_12670 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FY534_12675 PF01556 DnaJ C terminal domain FY534_12675 PF00684 DnaJ central domain FY534_12675 PF00226 DnaJ domain FY534_12685 PF03358 NADPH-dependent FMN reductase FY534_12690 PF03717 Penicillin-binding Protein dimerisation domain FY534_12690 PF00905 Penicillin binding protein transpeptidase domain FY534_12695 PF03717 Penicillin-binding Protein dimerisation domain FY534_12695 PF00905 Penicillin binding protein transpeptidase domain FY534_12715 PF00174 Oxidoreductase molybdopterin binding domain FY534_12720 PF03717 Penicillin-binding Protein dimerisation domain FY534_12720 PF03793 PASTA domain FY534_12720 PF00905 Penicillin binding protein transpeptidase domain FY534_12740 PF00248 Aldo/keto reductase family FY534_12750 PF00255 Glutathione peroxidase FY534_12755 PF03734 L,D-transpeptidase catalytic domain FY534_12755 PF01476 LysM domain FY534_12770 PF13520 Amino acid permease FY534_12775 PF00158 Sigma-54 interaction domain FY534_12775 PF00072 Response regulator receiver domain FY534_12775 PF02954 Bacterial regulatory protein, Fis family FY534_12780 PF01619 Proline dehydrogenase FY534_12785 PF02687 FtsX-like permease family FY534_12785 PF00005 ABC transporter FY534_12785 PF12704 MacB-like periplasmic core domain FY534_12790 PF00005 ABC transporter FY534_12805 PF09186 Domain of unknown function (DUF1949) FY534_12805 PF01205 Uncharacterized protein family UPF0029 FY534_12820 PF00501 AMP-binding enzyme FY534_12845 PF01066 CDP-alcohol phosphatidyltransferase FY534_12850 PF00460 Flagella basal body rod protein FY534_12850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY534_12855 PF00460 Flagella basal body rod protein FY534_12855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY534_12865 PF12116 Stage III sporulation protein D FY534_12870 PF01551 Peptidase family M23 FY534_12885 PF00512 His Kinase A (phospho-acceptor) domain FY534_12885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_12885 PF00989 PAS fold FY534_12890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY534_12905 PF00361 Proton-conducting membrane transporter FY534_12910 PF00361 Proton-conducting membrane transporter FY534_12915 PF00361 Proton-conducting membrane transporter FY534_12920 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus FY534_12920 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY534_12920 PF00361 Proton-conducting membrane transporter FY534_12925 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY534_12930 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY534_12935 PF12838 4Fe-4S dicluster domain FY534_12940 PF00146 NADH dehydrogenase FY534_12945 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY534_12950 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY534_12955 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY534_12960 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY534_12965 PF01209 ubiE/COQ5 methyltransferase family FY534_12970 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY534_12970 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FY534_12975 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY534_12975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY534_12980 PF00231 ATP synthase FY534_12985 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY534_12985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY534_12985 PF00306 ATP synthase alpha/beta chain, C terminal domain FY534_12990 PF00213 ATP synthase delta (OSCP) subunit FY534_12995 PF00430 ATP synthase B/B' CF(0) FY534_13000 PF00137 ATP synthase subunit C FY534_13005 PF00119 ATP synthase A chain FY534_13020 PF02803 Thiolase, C-terminal domain FY534_13020 PF00108 Thiolase, N-terminal domain FY534_13025 PF02350 UDP-N-acetylglucosamine 2-epimerase FY534_13035 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase FY534_13035 PF00534 Glycosyl transferases group 1 FY534_13040 PF07690 Major Facilitator Superfamily FY534_13045 PF00464 Serine hydroxymethyltransferase FY534_13050 PF04260 Protein of unknown function (DUF436) FY534_13055 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY534_13060 PF02659 Putative manganese efflux pump FY534_13065 PF03481 Putative GTP-binding controlling metal-binding FY534_13065 PF01300 Telomere recombination FY534_13070 PF09551 Stage II sporulation protein R (spore_II_R) FY534_13075 PF05175 Methyltransferase small domain FY534_13075 PF17827 PrmC N-terminal domain FY534_13080 PF03462 PCRF domain FY534_13080 PF00472 RF-1 domain FY534_13085 PF01197 Ribosomal protein L31 FY534_13100 PF07498 Rho termination factor, N-terminal domain FY534_13100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY534_13100 PF07497 Rho termination factor, RNA-binding domain FY534_13105 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FY534_13110 PF07690 Major Facilitator Superfamily FY534_13115 PF00155 Aminotransferase class I and II FY534_13120 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY534_13125 PF05853 beta-keto acid cleavage enzyme FY534_13130 PF03061 Thioesterase superfamily FY534_13135 PF00072 Response regulator receiver domain FY534_13140 PF00117 Glutamine amidotransferase class-I FY534_13140 PF06418 CTP synthase N-terminus FY534_13145 PF05066 HB1, ASXL, restriction endonuclease HTH domain FY534_13155 PF02770 Acyl-CoA dehydrogenase, middle domain FY534_13155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY534_13155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY534_13160 PF02770 Acyl-CoA dehydrogenase, middle domain FY534_13160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY534_13160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY534_13165 PF00378 Enoyl-CoA hydratase/isomerase FY534_13170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY534_13170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY534_13175 PF00108 Thiolase, N-terminal domain FY534_13175 PF02803 Thiolase, C-terminal domain FY534_13180 PF02754 Cysteine-rich domain FY534_13180 PF13183 4Fe-4S dicluster domain FY534_13205 PF13439 Glycosyltransferase Family 4 FY534_13205 PF00534 Glycosyl transferases group 1 FY534_13210 PF00072 Response regulator receiver domain FY534_13235 PF00535 Glycosyl transferase family 2 FY534_13240 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY534_13245 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY534_13260 PF00654 Voltage gated chloride channel FY534_13265 PF00589 Phage integrase family FY534_13265 PF14659 Phage integrase, N-terminal SAM-like domain FY534_13270 PF00128 Alpha amylase, catalytic domain FY534_13270 PF02903 Alpha amylase, N-terminal ig-like domain FY534_13280 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase FY534_13280 PF02310 B12 binding domain FY534_13285 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit FY534_13290 PF01713 Smr domain FY534_13290 PF00488 MutS domain V FY534_13300 PF12544 Lysine-2,3-aminomutase FY534_13315 PF02954 Bacterial regulatory protein, Fis family FY534_13315 PF13426 PAS domain FY534_13315 PF00158 Sigma-54 interaction domain FY534_13325 PF00491 Arginase family FY534_13330 PF17284 Spermidine synthase tetramerisation domain FY534_13335 PF01757 Acyltransferase family FY534_13345 PF00905 Penicillin binding protein transpeptidase domain FY534_13345 PF00912 Transglycosylase FY534_13350 PF00155 Aminotransferase class I and II FY534_13365 PF06305 Lipopolysaccharide assembly protein A domain FY534_13370 PF04055 Radical SAM superfamily FY534_13370 PF06463 Molybdenum Cofactor Synthesis C FY534_13380 PF02142 MGS-like domain FY534_13385 PF00557 Metallopeptidase family M24 FY534_13385 PF05195 Aminopeptidase P, N-terminal domain FY534_13420 PF13452 N-terminal half of MaoC dehydratase FY534_13425 PF00551 Formyl transferase FY534_13425 PF01842 ACT domain FY534_13435 PF13396 Phospholipase_D-nuclease N-terminal FY534_13435 PF13091 PLD-like domain FY534_13450 PF00860 Permease family FY534_13455 PF02590 Predicted SPOUT methyltransferase FY534_13460 PF13180 PDZ domain FY534_13465 PF00753 Metallo-beta-lactamase superfamily FY534_13480 PF00512 His Kinase A (phospho-acceptor) domain FY534_13480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY534_13480 PF00672 HAMP domain FY534_13480 PF13426 PAS domain FY534_13485 PF00072 Response regulator receiver domain FY534_13485 PF00486 Transcriptional regulatory protein, C terminal FY534_13495 PF03796 DnaB-like helicase C terminal domain FY534_13495 PF00772 DnaB-like helicase N terminal domain FY534_13500 PF01281 Ribosomal protein L9, N-terminal domain FY534_13500 PF03948 Ribosomal protein L9, C-terminal domain FY534_13510 PF01084 Ribosomal protein S18 FY534_13515 PF00436 Single-strand binding protein family FY534_13520 PF01250 Ribosomal protein S6 FY534_13525 PF01926 50S ribosome-binding GTPase FY534_13525 PF06071 Protein of unknown function (DUF933) FY534_13530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY534_13530 PF00384 Molybdopterin oxidoreductase FY534_13530 PF01568 Molydopterin dinucleotide binding domain FY534_13535 PF06107 Bacterial protein of unknown function (DUF951) FY534_13540 PF00924 Mechanosensitive ion channel FY534_13550 PF06866 Protein of unknown function (DUF1256) FY534_13560 PF04474 Protein of unknown function (DUF554) FY534_13565 PF02195 ParB-like nuclease domain FY534_13565 PF17762 HTH domain found in ParB protein FY534_13570 PF13614 AAA domain FY534_13575 PF17762 HTH domain found in ParB protein FY534_13575 PF02195 ParB-like nuclease domain FY534_13580 PF02527 rRNA small subunit methyltransferase G FY534_13585 PF01134 Glucose inhibited division protein A FY534_13585 PF13932 GidA associated domain FY534_13590 PF10396 GTP-binding protein TrmE N-terminus FY534_13590 PF12631 MnmE helical domain FY534_13590 PF01926 50S ribosome-binding GTPase FY534_13595 PF01424 R3H domain FY534_13595 PF14804 Jag N-terminus FY534_13600 PF02096 60Kd inner membrane protein FY534_13605 PF01809 Putative membrane protein insertion efficiency factor FY534_13610 PF00825 Ribonuclease P FY534_13615 PF00468 Ribosomal protein L34 FY534_13700 PF02768 DNA polymerase III beta subunit, C-terminal domain FY534_13700 PF02767 DNA polymerase III beta subunit, central domain FY534_13700 PF00712 DNA polymerase III beta subunit, N-terminal domain FY534_13710 PF09669 Phage regulatory protein Rha (Phage_pRha) FY534_13710 PF10549 ORF11CD3 domain FY534_13760 PF00589 Phage integrase family FY534_13795 PF04055 Radical SAM superfamily FY534_13845 PF02086 D12 class N6 adenine-specific DNA methyltransferase FY534_13865 PF00583 Acetyltransferase (GNAT) family FY534_13880 PF13614 AAA domain FY534_13955 PF05154 TM2 domain FY534_13960 PF11849 Domain of unknown function (DUF3369) FY534_13965 PF01464 Transglycosylase SLT domain FY534_14040 PF13152 Protein of unknown function (DUF3967) FY534_14040 PF13411 MerR HTH family regulatory protein FY534_14050 PF12323 Helix-turn-helix domain FY534_14050 PF07282 Putative transposase DNA-binding domain FY534_14050 PF01385 Probable transposase FY534_14055 PF02899 Phage integrase, N-terminal SAM-like domain FY534_14055 PF00589 Phage integrase family FY534_14110 PF12323 Helix-turn-helix domain FY534_14110 PF01385 Probable transposase FY534_14110 PF07282 Putative transposase DNA-binding domain FY534_14120 PF02586 SOS response associated peptidase (SRAP) FY534_14130 PF13361 UvrD-like helicase C-terminal domain FY534_14130 PF00580 UvrD/REP helicase N-terminal domain FY534_14135 PF13361 UvrD-like helicase C-terminal domain FY534_14135 PF00580 UvrD/REP helicase N-terminal domain FY534_14155 PF00271 Helicase conserved C-terminal domain FY534_14155 PF04851 Type III restriction enzyme, res subunit FY534_14230 PF04539 Sigma-70 region 3 FY534_14230 PF04545 Sigma-70, region 4 FY534_14230 PF04542 Sigma-70 region 2 FY534_14275 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FY534_14290 PF04542 Sigma-70 region 2 FY534_14290 PF04545 Sigma-70, region 4 FY534_14290 PF04539 Sigma-70 region 3 FY534_14310 PF04539 Sigma-70 region 3 FY534_14310 PF04545 Sigma-70, region 4 FY534_14310 PF04542 Sigma-70 region 2 FY534_14330 PF00929 Exonuclease FY534_14330 PF02811 PHP domain FY534_14330 PF14579 Helix-hairpin-helix motif FY534_14330 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY534_14330 PF07733 Bacterial DNA polymerase III alpha NTPase domain