locus-tag class description K3X25_00005 PF00308 Bacterial dnaA protein K3X25_00005 PF08299 Bacterial dnaA protein helix-turn-helix K3X25_00005 PF11638 DnaA N-terminal domain K3X25_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain K3X25_00010 PF02767 DNA polymerase III beta subunit, central domain K3X25_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain K3X25_00015 PF02463 RecF/RecN/SMC N terminal domain K3X25_00025 PF00204 DNA gyrase B K3X25_00025 PF00986 DNA gyrase B subunit, carboxyl terminus K3X25_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_00025 PF01751 Toprim domain K3X25_00040 PF01322 Cytochrome C' K3X25_00045 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase K3X25_00045 PF00034 Cytochrome c K3X25_00045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K3X25_00050 PF00394 Multicopper oxidase K3X25_00050 PF07731 Multicopper oxidase K3X25_00050 PF07732 Multicopper oxidase K3X25_00050 PF10518 TAT (twin-arginine translocation) pathway signal sequence K3X25_00055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K3X25_00055 PF00034 Cytochrome c K3X25_00065 PF00403 Heavy-metal-associated domain K3X25_00070 PF09278 MerR, DNA binding K3X25_00070 PF00376 MerR family regulatory protein K3X25_00075 PF00491 Arginase family K3X25_00080 PF17810 Arginine decarboxylase helical bundle domain K3X25_00080 PF17944 Arginine decarboxylase C-terminal helical extension K3X25_00080 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K3X25_00085 PF03435 Saccharopine dehydrogenase NADP binding domain K3X25_00085 PF16653 Saccharopine dehydrogenase C-terminal domain K3X25_00090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K3X25_00095 PF00491 Arginase family K3X25_00100 PF01964 Radical SAM ThiC family K3X25_00100 PF13667 ThiC-associated domain K3X25_00105 PF01266 FAD dependent oxidoreductase K3X25_00115 PF05690 Thiazole biosynthesis protein ThiG K3X25_00120 PF02581 Thiamine monophosphate synthase K3X25_00125 PF08543 Phosphomethylpyrimidine kinase K3X25_00135 PF03480 Bacterial extracellular solute-binding protein, family 7 K3X25_00135 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component K3X25_00145 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K3X25_00150 PF00701 Dihydrodipicolinate synthetase family K3X25_00155 PF05544 Proline racemase K3X25_00160 PF01266 FAD dependent oxidoreductase K3X25_00165 PF05544 Proline racemase K3X25_00170 PF02615 Malate/L-lactate dehydrogenase K3X25_00175 PF07729 FCD domain K3X25_00175 PF00392 Bacterial regulatory proteins, gntR family K3X25_00180 PF00171 Aldehyde dehydrogenase family K3X25_00185 PF00205 Thiamine pyrophosphate enzyme, central domain K3X25_00185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K3X25_00185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K3X25_00190 PF08220 DeoR-like helix-turn-helix domain K3X25_00190 PF00455 DeoR C terminal sensor domain K3X25_00195 PF16350 FAD dependent oxidoreductase central domain K3X25_00195 PF01571 Aminomethyltransferase folate-binding domain K3X25_00195 PF08669 Glycine cleavage T-protein C-terminal barrel domain K3X25_00195 PF01266 FAD dependent oxidoreductase K3X25_00210 PF00005 ABC transporter K3X25_00215 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_00220 PF03466 LysR substrate binding domain K3X25_00225 PF00266 Aminotransferase class-V K3X25_00230 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase K3X25_00235 PF00171 Aldehyde dehydrogenase family K3X25_00240 PF00202 Aminotransferase class-III K3X25_00250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K3X25_00250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K3X25_00260 PF00459 Inositol monophosphatase family K3X25_00265 PF02690 Na+/Pi-cotransporter K3X25_00275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_00275 PF03466 LysR substrate binding domain K3X25_00285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K3X25_00285 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component K3X25_00290 PF03480 Bacterial extracellular solute-binding protein, family 7 K3X25_00295 PF01266 FAD dependent oxidoreductase K3X25_00305 PF17806 Sarcosine oxidase A3 domain K3X25_00305 PF07992 Pyridine nucleotide-disulphide oxidoreductase K3X25_00310 PF01042 Endoribonuclease L-PSP K3X25_00325 PF00486 Transcriptional regulatory protein, C terminal K3X25_00325 PF00072 Response regulator receiver domain K3X25_00330 PF00512 His Kinase A (phospho-acceptor) domain K3X25_00330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_00330 PF00672 HAMP domain K3X25_00350 PF00005 ABC transporter K3X25_00350 PF00664 ABC transporter transmembrane region K3X25_00355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K3X25_00355 PF00529 HlyD membrane-fusion protein of T1SS K3X25_00360 PF02515 CoA-transferase family III K3X25_00365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K3X25_00365 PF02770 Acyl-CoA dehydrogenase, middle domain K3X25_00365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K3X25_00370 PF06082 Exopolysaccharide biosynthesis protein YbjH K3X25_00390 PF02397 Bacterial sugar transferase K3X25_00395 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain K3X25_00395 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family K3X25_00400 PF00857 Isochorismatase family K3X25_00410 PF00202 Aminotransferase class-III K3X25_00415 PF00472 RF-1 domain K3X25_00420 PF02592 Putative vitamin uptake transporter K3X25_00430 PF03411 Penicillin-insensitive murein endopeptidase K3X25_00445 PF02325 YGGT family K3X25_00450 PF00271 Helicase conserved C-terminal domain K3X25_00450 PF00570 HRDC domain K3X25_00450 PF16124 RecQ zinc-binding K3X25_00450 PF00270 DEAD/DEAH box helicase K3X25_00450 PF09382 RQC domain K3X25_00455 PF03883 Peroxide stress protein YaaA K3X25_00460 PF00672 HAMP domain K3X25_00460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_00460 PF00512 His Kinase A (phospho-acceptor) domain K3X25_00460 PF01627 Hpt domain K3X25_00460 PF00072 Response regulator receiver domain K3X25_00460 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K3X25_00470 PF00445 Ribonuclease T2 family K3X25_00480 PF00698 Acyl transferase domain K3X25_00480 PF14765 Polyketide synthase dehydratase K3X25_00480 PF00550 Phosphopantetheine attachment site K3X25_00480 PF08659 KR domain K3X25_00480 PF02801 Beta-ketoacyl synthase, C-terminal domain K3X25_00480 PF00109 Beta-ketoacyl synthase, N-terminal domain K3X25_00480 PF08240 Alcohol dehydrogenase GroES-like domain K3X25_00480 PF00107 Zinc-binding dehydrogenase K3X25_00480 PF16197 Ketoacyl-synthetase C-terminal extension K3X25_00490 PF01165 Ribosomal protein S21 K3X25_00495 PF07690 Major Facilitator Superfamily K3X25_00505 PF00561 alpha/beta hydrolase fold K3X25_00505 PF08386 TAP-like protein K3X25_00515 PF02423 Ornithine cyclodeaminase/mu-crystallin family K3X25_00535 PF00155 Aminotransferase class I and II K3X25_00540 PF03186 CobD/Cbib protein K3X25_00555 PF02463 RecF/RecN/SMC N terminal domain K3X25_00560 PF02492 CobW/HypB/UreG, nucleotide-binding domain K3X25_00560 PF07683 Cobalamin synthesis protein cobW C-terminal domain K3X25_00575 PF02514 CobN/Magnesium Chelatase K3X25_00600 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K3X25_00610 PF03358 NADPH-dependent FMN reductase K3X25_00615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K3X25_00625 PF01266 FAD dependent oxidoreductase K3X25_00625 PF05430 S-adenosyl-L-methionine-dependent methyltransferase K3X25_00630 PF01266 FAD dependent oxidoreductase K3X25_00630 PF05430 S-adenosyl-L-methionine-dependent methyltransferase K3X25_00635 PF00892 EamA-like transporter family K3X25_00640 PF01464 Transglycosylase SLT domain K3X25_00640 PF14718 Soluble lytic murein transglycosylase L domain K3X25_00645 PF00701 Dihydrodipicolinate synthetase family K3X25_00655 PF01980 tRNA-methyltransferase O K3X25_00660 PF01668 SmpB protein K3X25_00670 PF03454 MoeA C-terminal region (domain IV) K3X25_00670 PF03453 MoeA N-terminal region (domain I and II) K3X25_00670 PF00994 Probable molybdopterin binding domain K3X25_00675 PF12804 MobA-like NTP transferase domain K3X25_00680 PF02634 FdhD/NarQ family K3X25_00695 PF03466 LysR substrate binding domain K3X25_00695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_00710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K3X25_00710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K3X25_00735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K3X25_00735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K3X25_00735 PF12806 Acetyl-CoA dehydrogenase C-terminal like K3X25_00735 PF02770 Acyl-CoA dehydrogenase, middle domain K3X25_00740 PF01300 Telomere recombination K3X25_00740 PF03481 Putative GTP-binding controlling metal-binding K3X25_00745 PF02622 Uncharacterized ACR, COG1678 K3X25_00760 PF07992 Pyridine nucleotide-disulphide oxidoreductase K3X25_00760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K3X25_00765 PF00672 HAMP domain K3X25_00765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_00765 PF00512 His Kinase A (phospho-acceptor) domain K3X25_00765 PF13426 PAS domain K3X25_00775 PF00175 Oxidoreductase NAD-binding domain K3X25_00775 PF00970 Oxidoreductase FAD-binding domain K3X25_00775 PF00111 2Fe-2S iron-sulfur cluster binding domain K3X25_00780 PF16347 Domain of unknown function (DUF4976) K3X25_00780 PF00884 Sulfatase K3X25_00790 PF01903 CbiX K3X25_00795 PF02570 Precorrin-8X methylmutase K3X25_00800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K3X25_00805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K3X25_00810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K3X25_00810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K3X25_00815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K3X25_00825 PF00293 NUDIX domain K3X25_00830 PF03734 L,D-transpeptidase catalytic domain K3X25_00835 PF00155 Aminotransferase class I and II K3X25_00840 PF01327 Polypeptide deformylase K3X25_00845 PF01327 Polypeptide deformylase K3X25_00850 PF02911 Formyl transferase, C-terminal domain K3X25_00850 PF00551 Formyl transferase K3X25_00865 PF00075 RNase H K3X25_00875 PF02401 LytB protein K3X25_00885 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K3X25_00890 PF01192 RNA polymerase Rpb6 K3X25_00895 PF04607 Region found in RelA / SpoT proteins K3X25_00895 PF02824 TGS domain K3X25_00895 PF13291 ACT domain K3X25_00905 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ K3X25_00910 PF01810 LysE type translocator K3X25_00915 PF01648 4'-phosphopantetheinyl transferase superfamily K3X25_00920 PF10502 Signal peptidase, peptidase S26 K3X25_00925 PF00035 Double-stranded RNA binding motif K3X25_00925 PF14622 Ribonuclease-III-like K3X25_00930 PF07650 KH domain K3X25_00930 PF01926 50S ribosome-binding GTPase K3X25_00940 PF02565 Recombination protein O C terminal K3X25_00940 PF11967 Recombination protein O N terminal K3X25_00965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K3X25_00965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K3X25_00965 PF02770 Acyl-CoA dehydrogenase, middle domain K3X25_00980 PF01293 Phosphoenolpyruvate carboxykinase K3X25_00985 PF00486 Transcriptional regulatory protein, C terminal K3X25_00985 PF00072 Response regulator receiver domain K3X25_00990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_00990 PF13755 Sensor N-terminal transmembrane domain K3X25_00990 PF00672 HAMP domain K3X25_00990 PF00512 His Kinase A (phospho-acceptor) domain K3X25_00990 PF13756 Stimulus-sensing domain K3X25_00995 PF07475 HPr Serine kinase C-terminal domain K3X25_00995 PF02603 HPr Serine kinase N terminus K3X25_01000 PF03668 P-loop ATPase protein family K3X25_01010 PF00381 PTS HPr component phosphorylation site K3X25_01020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K3X25_01020 PF00672 HAMP domain K3X25_01020 PF02203 Tar ligand binding domain homologue K3X25_01030 PF01012 Electron transfer flavoprotein domain K3X25_01030 PF00766 Electron transfer flavoprotein FAD-binding domain K3X25_01035 PF01012 Electron transfer flavoprotein domain K3X25_01050 PF01923 Cobalamin adenosyltransferase K3X25_01060 PF00106 short chain dehydrogenase K3X25_01070 PF03989 DNA gyrase C-terminal domain, beta-propeller K3X25_01070 PF00521 DNA gyrase/topoisomerase IV, subunit A K3X25_01080 PF01435 Peptidase family M48 K3X25_01085 PF03143 Elongation factor Tu C-terminal domain K3X25_01085 PF00009 Elongation factor Tu GTP binding domain K3X25_01085 PF03144 Elongation factor Tu domain 2 K3X25_01105 PF00467 KOW motif K3X25_01105 PF02357 Transcription termination factor nusG K3X25_01110 PF00298 Ribosomal protein L11, RNA binding domain K3X25_01110 PF03946 Ribosomal protein L11, N-terminal domain K3X25_01115 PF00687 Ribosomal protein L1p/L10e family K3X25_01120 PF00466 Ribosomal protein L10 K3X25_01125 PF00542 Ribosomal protein L7/L12 C-terminal domain K3X25_01125 PF16320 Ribosomal protein L7/L12 dimerisation domain K3X25_01130 PF04563 RNA polymerase beta subunit K3X25_01130 PF04561 RNA polymerase Rpb2, domain 2 K3X25_01130 PF04565 RNA polymerase Rpb2, domain 3 K3X25_01130 PF00562 RNA polymerase Rpb2, domain 6 K3X25_01130 PF04560 RNA polymerase Rpb2, domain 7 K3X25_01130 PF10385 RNA polymerase beta subunit external 1 domain K3X25_01135 PF04997 RNA polymerase Rpb1, domain 1 K3X25_01135 PF00623 RNA polymerase Rpb1, domain 2 K3X25_01135 PF04983 RNA polymerase Rpb1, domain 3 K3X25_01135 PF05000 RNA polymerase Rpb1, domain 4 K3X25_01135 PF04998 RNA polymerase Rpb1, domain 5 K3X25_01145 PF00164 Ribosomal protein S12/S23 K3X25_01150 PF00177 Ribosomal protein S7p/S5e K3X25_01155 PF00679 Elongation factor G C-terminus K3X25_01155 PF14492 Elongation Factor G, domain II K3X25_01155 PF03764 Elongation factor G, domain IV K3X25_01155 PF00009 Elongation factor Tu GTP binding domain K3X25_01155 PF03144 Elongation factor Tu domain 2 K3X25_01160 PF03144 Elongation factor Tu domain 2 K3X25_01160 PF00009 Elongation factor Tu GTP binding domain K3X25_01160 PF03143 Elongation factor Tu C-terminal domain K3X25_01170 PF00338 Ribosomal protein S10p/S20e K3X25_01175 PF00297 Ribosomal protein L3 K3X25_01180 PF00573 Ribosomal protein L4/L1 family K3X25_01185 PF00276 Ribosomal protein L23 K3X25_01200 PF03947 Ribosomal Proteins L2, C-terminal domain K3X25_01200 PF00181 Ribosomal Proteins L2, RNA binding domain K3X25_01205 PF00203 Ribosomal protein S19 K3X25_01210 PF00237 Ribosomal protein L22p/L17e K3X25_01215 PF07650 KH domain K3X25_01215 PF00189 Ribosomal protein S3, C-terminal domain K3X25_01220 PF00252 Ribosomal protein L16p/L10e K3X25_01260 PF00831 Ribosomal L29 protein K3X25_01265 PF00366 Ribosomal protein S17 K3X25_01270 PF00238 Ribosomal protein L14p/L23e K3X25_01275 PF00467 KOW motif K3X25_01275 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 K3X25_01280 PF00281 Ribosomal protein L5 K3X25_01280 PF00673 ribosomal L5P family C-terminus K3X25_01285 PF00253 Ribosomal protein S14p/S29e K3X25_01290 PF00410 Ribosomal protein S8 K3X25_01295 PF00347 Ribosomal protein L6 K3X25_01300 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast K3X25_01305 PF00333 Ribosomal protein S5, N-terminal domain K3X25_01305 PF03719 Ribosomal protein S5, C-terminal domain K3X25_01310 PF00327 Ribosomal protein L30p/L7e K3X25_01315 PF00327 Ribosomal protein L30p/L7e K3X25_01335 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K3X25_01340 PF00344 SecY translocase K3X25_01350 PF00416 Ribosomal protein S13/S18 K3X25_01355 PF00411 Ribosomal protein S11 K3X25_01360 PF01000 RNA polymerase Rpb3/RpoA insert domain K3X25_01360 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain K3X25_01360 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain K3X25_01365 PF01196 Ribosomal protein L17 K3X25_01375 PF00004 ATPase family associated with various cellular activities (AAA) K3X25_01375 PF16193 AAA C-terminal domain K3X25_01375 PF12002 MgsA AAA+ ATPase C terminal K3X25_01385 PF02537 CrcB-like protein, Camphor Resistance (CrcB) K3X25_01390 PF00849 RNA pseudouridylate synthase K3X25_01390 PF01479 S4 domain K3X25_01395 PF13419 Haloacid dehalogenase-like hydrolase K3X25_01405 PF00497 Bacterial extracellular solute-binding proteins, family 3 K3X25_01410 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_01415 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_01420 PF00005 ABC transporter K3X25_01445 PF00696 Amino acid kinase family K3X25_01455 PF01926 50S ribosome-binding GTPase K3X25_01465 PF02096 60Kd inner membrane protein K3X25_01465 PF14849 YidC periplasmic domain K3X25_01470 PF00563 EAL domain K3X25_01470 PF00990 Diguanylate cyclase, GGDEF domain K3X25_01470 PF08447 PAS fold K3X25_01470 PF08448 PAS fold K3X25_01475 PF01171 PP-loop family K3X25_01490 PF01809 Putative membrane protein insertion efficiency factor K3X25_01495 PF00825 Ribonuclease P K3X25_01500 PF00468 Ribosomal protein L34 K3X25_01505 PF05035 2-keto-3-deoxy-galactonokinase K3X25_01510 PF04107 Glutamate-cysteine ligase family 2(GCS2) K3X25_01530 PF04452 RNA methyltransferase K3X25_01535 PF01040 UbiA prenyltransferase family K3X25_01540 PF00691 OmpA family K3X25_01540 PF05736 OprF membrane domain K3X25_01560 PF09186 Domain of unknown function (DUF1949) K3X25_01560 PF01205 Uncharacterized protein family UPF0029 K3X25_01565 PF01219 Prokaryotic diacylglycerol kinase K3X25_01575 PF00265 Thymidine kinase K3X25_01580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K3X25_01580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K3X25_01585 PF01588 Putative tRNA binding domain K3X25_01590 PF14748 Pyrroline-5-carboxylate reductase dimerisation K3X25_01590 PF03807 NADP oxidoreductase coenzyme F420-dependent K3X25_01600 PF02687 FtsX-like permease family K3X25_01600 PF12704 MacB-like periplasmic core domain K3X25_01605 PF00005 ABC transporter K3X25_01610 PF17102 Stealth protein CR3, conserved region 3 K3X25_01610 PF11380 Stealth protein CR2, conserved region 2 K3X25_01610 PF17101 Stealth protein CR1, conserved region 1 K3X25_01610 PF17103 Stealth protein CR4, conserved region 4 K3X25_01625 PF00204 DNA gyrase B K3X25_01625 PF00986 DNA gyrase B subunit, carboxyl terminus K3X25_01625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_01625 PF01751 Toprim domain K3X25_01630 PF08713 DNA alkylation repair enzyme K3X25_01635 PF01416 tRNA pseudouridine synthase K3X25_01640 PF04317 YcjX-like family, DUF463 K3X25_01650 PF05128 Domain of unknown function (DUF697) K3X25_01675 PF08264 Anticodon-binding domain of tRNA K3X25_01675 PF00133 tRNA synthetases class I (I, L, M and V) K3X25_01680 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain K3X25_01680 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K3X25_01685 PF00005 ABC transporter K3X25_01690 PF01061 ABC-2 type transporter K3X25_01695 PF01343 Peptidase family S49 K3X25_01695 PF06965 Na+/H+ antiporter 1 K3X25_01705 PF01699 Sodium/calcium exchanger protein K3X25_01715 PF01541 GIY-YIG catalytic domain K3X25_01715 PF08459 UvrC Helix-hairpin-helix N-terminal K3X25_01715 PF12826 Helix-hairpin-helix motif K3X25_01715 PF02151 UvrB/uvrC motif K3X25_01720 PF01066 CDP-alcohol phosphatidyltransferase K3X25_01730 PF02391 MoaE protein K3X25_01740 PF01066 CDP-alcohol phosphatidyltransferase K3X25_01745 PF00589 Phage integrase family K3X25_01745 PF02899 Phage integrase, N-terminal SAM-like domain K3X25_01755 PF00923 Transaldolase/Fructose-6-phosphate aldolase K3X25_01760 PF18319 PriA DNA helicase Cys-rich region (CRR) domain K3X25_01760 PF00270 DEAD/DEAH box helicase K3X25_01760 PF17764 3′ DNA-binding domain (3′BD) K3X25_01760 PF18074 Primosomal protein N C-terminal domain K3X25_01765 PF04143 Sulphur transport K3X25_01775 PF01625 Peptide methionine sulfoxide reductase K3X25_01795 PF00111 2Fe-2S iron-sulfur cluster binding domain K3X25_01805 PF07690 Major Facilitator Superfamily K3X25_01815 PF00132 Bacterial transferase hexapeptide (six repeats) K3X25_01820 PF00392 Bacterial regulatory proteins, gntR family K3X25_01820 PF00155 Aminotransferase class I and II K3X25_01825 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K3X25_01825 PF02843 Phosphoribosylglycinamide synthetase, C domain K3X25_01825 PF02844 Phosphoribosylglycinamide synthetase, N domain K3X25_01830 PF02601 Exonuclease VII, large subunit K3X25_01830 PF13742 OB-fold nucleic acid binding domain K3X25_01835 PF01479 S4 domain K3X25_01835 PF00849 RNA pseudouridylate synthase K3X25_01840 PF14437 MafB19-like deaminase K3X25_01860 PF02686 Glu-tRNAGln amidotransferase C subunit K3X25_01865 PF01425 Amidase K3X25_01875 PF01510 N-acetylmuramoyl-L-alanine amidase K3X25_01885 PF00471 Ribosomal protein L33 K3X25_01900 PF01027 Inhibitor of apoptosis-promoting Bax1 K3X25_01910 PF03466 LysR substrate binding domain K3X25_01910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_01920 PF16197 Ketoacyl-synthetase C-terminal extension K3X25_01920 PF00107 Zinc-binding dehydrogenase K3X25_01920 PF00698 Acyl transferase domain K3X25_01920 PF08240 Alcohol dehydrogenase GroES-like domain K3X25_01920 PF14765 Polyketide synthase dehydratase K3X25_01920 PF08659 KR domain K3X25_01920 PF02801 Beta-ketoacyl synthase, C-terminal domain K3X25_01920 PF00109 Beta-ketoacyl synthase, N-terminal domain K3X25_01920 PF00550 Phosphopantetheine attachment site K3X25_01925 PF01381 Helix-turn-helix K3X25_01930 PF00459 Inositol monophosphatase family K3X25_01935 PF01979 Amidohydrolase family K3X25_01940 PF01979 Amidohydrolase family K3X25_01945 PF00571 CBS domain K3X25_01945 PF01769 Divalent cation transporter K3X25_01945 PF03448 MgtE intracellular N domain K3X25_01950 PF01812 5-formyltetrahydrofolate cyclo-ligase family K3X25_01955 PF03600 Citrate transporter K3X25_01955 PF02080 TrkA-C domain K3X25_01960 PF01810 LysE type translocator K3X25_01965 PF01037 Lrp/AsnC ligand binding domain K3X25_01970 PF01047 MarR family K3X25_01980 PF01709 Transcriptional regulator K3X25_01990 PF00881 Nitroreductase family K3X25_02000 PF00892 EamA-like transporter family K3X25_02005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K3X25_02010 PF02548 Ketopantoate hydroxymethyltransferase K3X25_02015 PF02569 Pantoate-beta-alanine ligase K3X25_02020 PF01546 Peptidase family M20/M25/M40 K3X25_02020 PF07687 Peptidase dimerisation domain K3X25_02055 PF07509 Protein of unknown function (DUF1523) K3X25_02060 PF00171 Aldehyde dehydrogenase family K3X25_02065 PF01791 DeoC/LacD family aldolase K3X25_02070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K3X25_02075 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_02080 PF12911 N-terminal TM domain of oligopeptide transport permease C K3X25_02080 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_02085 PF00005 ABC transporter K3X25_02085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K3X25_02090 PF00005 ABC transporter K3X25_02090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K3X25_02100 PF13380 CoA binding domain K3X25_02100 PF13607 Succinyl-CoA ligase like flavodoxin domain K3X25_02100 PF00583 Acetyltransferase (GNAT) family K3X25_02105 PF00850 Histone deacetylase domain K3X25_02115 PF01266 FAD dependent oxidoreductase K3X25_02120 PF00248 Aldo/keto reductase family K3X25_02130 PF13202 EF hand K3X25_02130 PF00923 Transaldolase/Fructose-6-phosphate aldolase K3X25_02135 PF02608 ABC transporter substrate-binding protein PnrA-like K3X25_02140 PF00027 Cyclic nucleotide-binding domain K3X25_02140 PF00520 Ion transport protein K3X25_02145 PF02653 Branched-chain amino acid transport system / permease component K3X25_02150 PF02653 Branched-chain amino acid transport system / permease component K3X25_02155 PF00005 ABC transporter K3X25_02165 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase K3X25_02165 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K3X25_02170 PF01799 [2Fe-2S] binding domain K3X25_02170 PF00111 2Fe-2S iron-sulfur cluster binding domain K3X25_02180 PF07733 Bacterial DNA polymerase III alpha NTPase domain K3X25_02180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K3X25_02180 PF14579 Helix-hairpin-helix motif K3X25_02180 PF02811 PHP domain K3X25_02185 PF04102 SlyX K3X25_02190 PF03129 Anticodon binding domain K3X25_02190 PF13393 Histidyl-tRNA synthetase K3X25_02195 PF13393 Histidyl-tRNA synthetase K3X25_02200 PF01634 ATP phosphoribosyltransferase K3X25_02205 PF00579 tRNA synthetases class I (W and Y) K3X25_02215 PF03023 Lipid II flippase MurJ K3X25_02220 PF08335 GlnD PII-uridylyltransferase K3X25_02220 PF01966 HD domain K3X25_02230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K3X25_02235 PF02021 Uncharacterised protein family UPF0102 K3X25_02240 PF02951 Prokaryotic glutathione synthetase, N-terminal domain K3X25_02240 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain K3X25_02245 PF07859 alpha/beta hydrolase fold K3X25_02250 PF01078 Magnesium chelatase, subunit ChlI K3X25_02250 PF13335 Magnesium chelatase, subunit ChlI C-terminal K3X25_02265 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase K3X25_02275 PF04127 DNA / pantothenate metabolism flavoprotein K3X25_02275 PF02441 Flavoprotein K3X25_02280 PF00692 dUTPase K3X25_02285 PF00899 ThiF family K3X25_02300 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_02305 PF01432 Peptidase family M3 K3X25_02310 PF01545 Cation efflux family K3X25_02310 PF16916 Dimerisation domain of Zinc Transporter K3X25_02325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K3X25_02325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K3X25_02340 PF01266 FAD dependent oxidoreductase K3X25_02340 PF16350 FAD dependent oxidoreductase central domain K3X25_02340 PF01571 Aminomethyltransferase folate-binding domain K3X25_02340 PF08669 Glycine cleavage T-protein C-terminal barrel domain K3X25_02375 PF00085 Thioredoxin K3X25_02380 PF01597 Glycine cleavage H-protein K3X25_02390 PF01554 MatE K3X25_02400 PF00749 tRNA synthetases class I (E and Q), catalytic domain K3X25_02420 PF00795 Carbon-nitrogen hydrolase K3X25_02420 PF02540 NAD synthase K3X25_02430 PF08502 LeuA allosteric (dimerisation) domain K3X25_02430 PF00682 HMGL-like K3X25_02440 PF04085 rod shape-determining protein MreC K3X25_02450 PF03717 Penicillin-binding Protein dimerisation domain K3X25_02450 PF00905 Penicillin binding protein transpeptidase domain K3X25_02455 PF01098 Cell cycle protein K3X25_02460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K3X25_02480 PF00691 OmpA family K3X25_02480 PF01389 OmpA-like transmembrane domain K3X25_02490 PF00004 ATPase family associated with various cellular activities (AAA) K3X25_02490 PF07724 AAA domain (Cdc48 subfamily) K3X25_02490 PF17871 AAA lid domain K3X25_02490 PF02861 Clp amino terminal domain, pathogenicity island component K3X25_02490 PF10431 C-terminal, D2-small domain, of ClpB protein K3X25_02495 PF16123 Hydroxyacylglutathione hydrolase C-terminus K3X25_02495 PF00753 Metallo-beta-lactamase superfamily K3X25_02505 PF08241 Methyltransferase domain K3X25_02515 PF00213 ATP synthase delta (OSCP) subunit K3X25_02520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K3X25_02520 PF00306 ATP synthase alpha/beta chain, C terminal domain K3X25_02520 PF02874 ATP synthase alpha/beta family, beta-barrel domain K3X25_02525 PF00231 ATP synthase K3X25_02530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K3X25_02530 PF02874 ATP synthase alpha/beta family, beta-barrel domain K3X25_02535 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain K3X25_02545 PF07690 Major Facilitator Superfamily K3X25_02550 PF09458 H-type lectin domain K3X25_02555 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase K3X25_02555 PF14572 Phosphoribosyl synthetase-associated domain K3X25_02565 PF00364 Biotin-requiring enzyme K3X25_02565 PF00561 alpha/beta hydrolase fold K3X25_02570 PF01212 Beta-eliminating lyase K3X25_02575 PF03692 Putative zinc- or iron-chelating domain K3X25_02585 PF06574 FAD synthetase K3X25_02585 PF01687 Riboflavin kinase K3X25_02590 PF01575 MaoC like domain K3X25_02605 PF01368 DHH family K3X25_02605 PF02833 DHHA2 domain K3X25_02615 PF03150 Di-haem cytochrome c peroxidase K3X25_02620 PF00166 Chaperonin 10 Kd subunit K3X25_02625 PF00118 TCP-1/cpn60 chaperonin family K3X25_02640 PF04055 Radical SAM superfamily K3X25_02645 PF00027 Cyclic nucleotide-binding domain K3X25_02645 PF13545 Crp-like helix-turn-helix domain K3X25_02655 PF00115 Cytochrome C and Quinol oxidase polypeptide I K3X25_02670 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K3X25_02670 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP K3X25_02675 PF13746 4Fe-4S dicluster domain K3X25_02675 PF12801 4Fe-4S binding domain K3X25_02675 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase K3X25_02685 PF00403 Heavy-metal-associated domain K3X25_02690 PF03597 Cytochrome oxidase maturation protein cbb3-type K3X25_02695 PF00196 Bacterial regulatory proteins, luxR family K3X25_02695 PF00072 Response regulator receiver domain K3X25_02700 PF13472 GDSL-like Lipase/Acylhydrolase family K3X25_02705 PF00005 ABC transporter K3X25_02725 PF13085 2Fe-2S iron-sulfur cluster binding domain K3X25_02725 PF13237 4Fe-4S dicluster domain K3X25_02730 PF00890 FAD binding domain K3X25_02730 PF02910 Fumarate reductase flavoprotein C-term K3X25_02735 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K3X25_02740 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K3X25_02745 PF01575 MaoC like domain K3X25_02755 PF03328 HpcH/HpaI aldolase/citrate lyase family K3X25_02770 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain K3X25_02770 PF00056 lactate/malate dehydrogenase, NAD binding domain K3X25_02780 PF00549 CoA-ligase K3X25_02780 PF08442 ATP-grasp domain K3X25_02790 PF02629 CoA binding domain K3X25_02790 PF00549 CoA-ligase K3X25_02795 PF16078 2-oxoglutarate dehydrogenase N-terminus K3X25_02795 PF02779 Transketolase, pyrimidine binding domain K3X25_02795 PF16870 2-oxoglutarate dehydrogenase C-terminal K3X25_02795 PF00676 Dehydrogenase E1 component K3X25_02800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K3X25_02800 PF02817 e3 binding domain K3X25_02800 PF00364 Biotin-requiring enzyme K3X25_02810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K3X25_02810 PF07992 Pyridine nucleotide-disulphide oxidoreductase K3X25_02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_02840 PF00512 His Kinase A (phospho-acceptor) domain K3X25_02840 PF08521 Two-component sensor kinase N-terminal K3X25_02845 PF00486 Transcriptional regulatory protein, C terminal K3X25_02845 PF00072 Response regulator receiver domain K3X25_02860 PF01970 Tripartite tricarboxylate transporter TctA family K3X25_02865 PF05161 MOFRL family K3X25_02865 PF13660 Domain of unknown function (DUF4147) K3X25_02870 PF02525 Flavodoxin-like fold K3X25_02875 PF03466 LysR substrate binding domain K3X25_02875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_02885 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K3X25_02890 PF00119 ATP synthase A chain K3X25_02895 PF00137 ATP synthase subunit C K3X25_02900 PF00430 ATP synthase B/B' CF(0) K3X25_02905 PF00430 ATP synthase B/B' CF(0) K3X25_02915 PF07729 FCD domain K3X25_02915 PF00392 Bacterial regulatory proteins, gntR family K3X25_02920 PF00223 Photosystem I psaA/psaB protein K3X25_02920 PF00691 OmpA family K3X25_02925 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K3X25_02925 PF02805 Metal binding domain of Ada K3X25_02925 PF12833 Helix-turn-helix domain K3X25_02925 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain K3X25_02930 PF10576 Iron-sulfur binding domain of endonuclease III K3X25_02930 PF00633 Helix-hairpin-helix motif K3X25_02930 PF00730 HhH-GPD superfamily base excision DNA repair protein K3X25_02935 PF00294 pfkB family carbohydrate kinase K3X25_02940 PF02566 OsmC-like protein K3X25_02955 PF01230 HIT domain K3X25_02965 PF01367 5'-3' exonuclease, C-terminal SAM fold K3X25_02965 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain K3X25_02965 PF00476 DNA polymerase family A K3X25_02965 PF01612 3'-5' exonuclease K3X25_02970 PF01545 Cation efflux family K3X25_02970 PF16916 Dimerisation domain of Zinc Transporter K3X25_02985 PF01261 Xylose isomerase-like TIM barrel K3X25_02995 PF17863 AAA lid domain K3X25_02995 PF07726 ATPase family associated with various cellular activities (AAA) K3X25_03015 PF02913 FAD linked oxidases, C-terminal domain K3X25_03015 PF01565 FAD binding domain K3X25_03020 PF01565 FAD binding domain K3X25_03025 PF02754 Cysteine-rich domain K3X25_03025 PF13183 4Fe-4S dicluster domain K3X25_03035 PF00011 Hsp20/alpha crystallin family K3X25_03040 PF00171 Aldehyde dehydrogenase family K3X25_03045 PF03576 Peptidase family S58 K3X25_03055 PF06224 Winged helix DNA-binding domain K3X25_03065 PF00171 Aldehyde dehydrogenase family K3X25_03070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K3X25_03070 PF00005 ABC transporter K3X25_03075 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_03075 PF12911 N-terminal TM domain of oligopeptide transport permease C K3X25_03080 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_03085 PF01883 Iron-sulfur cluster assembly protein K3X25_03085 PF10609 NUBPL iron-transfer P-loop NTPase K3X25_03100 PF01197 Ribosomal protein L31 K3X25_03105 PF01245 Ribosomal protein L19 K3X25_03110 PF01746 tRNA (Guanine-1)-methyltransferase K3X25_03120 PF05239 PRC-barrel domain K3X25_03120 PF01782 RimM N-terminal domain K3X25_03125 PF00881 Nitroreductase family K3X25_03130 PF00886 Ribosomal protein S16 K3X25_03150 PF02881 SRP54-type protein, helical bundle domain K3X25_03150 PF02978 Signal peptide binding domain K3X25_03150 PF00448 SRP54-type protein, GTPase domain K3X25_03155 PF00582 Universal stress protein family K3X25_03170 PF17773 UPF0176 acylphosphatase like domain K3X25_03170 PF00581 Rhodanese-like domain K3X25_03180 PF02698 DUF218 domain K3X25_03190 PF00571 CBS domain K3X25_03190 PF00005 ABC transporter K3X25_03195 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_03205 PF04069 Substrate binding domain of ABC-type glycine betaine transport system K3X25_03210 PF00440 Bacterial regulatory proteins, tetR family K3X25_03210 PF13977 BetI-type transcriptional repressor, C-terminal K3X25_03215 PF12411 Choline sulfatase enzyme C terminal K3X25_03215 PF00884 Sulfatase K3X25_03220 PF00171 Aldehyde dehydrogenase family K3X25_03225 PF00732 GMC oxidoreductase K3X25_03225 PF05199 GMC oxidoreductase K3X25_03235 PF06114 IrrE N-terminal-like domain K3X25_03235 PF09856 Predicted transcriptional regulator (DUF2083) K3X25_03235 PF01381 Helix-turn-helix K3X25_03240 PF07690 Major Facilitator Superfamily K3X25_03245 PF01039 Carboxyl transferase domain K3X25_03270 PF00364 Biotin-requiring enzyme K3X25_03270 PF00289 Biotin carboxylase, N-terminal domain K3X25_03270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K3X25_03270 PF18140 Propionyl-coenzyme A carboxylase BT domain K3X25_03270 PF02785 Biotin carboxylase C-terminal domain K3X25_03280 PF02310 B12 binding domain K3X25_03280 PF01642 Methylmalonyl-CoA mutase K3X25_03290 PF06965 Na+/H+ antiporter 1 K3X25_03295 PF00226 DnaJ domain K3X25_03295 PF05099 Tellurite resistance protein TerB K3X25_03315 PF02541 Ppx/GppA phosphatase family K3X25_03320 PF02503 Polyphosphate kinase middle domain K3X25_03320 PF13090 Polyphosphate kinase C-terminal domain 2 K3X25_03320 PF17941 Polyphosphate kinase C-terminal domain 1 K3X25_03320 PF13089 Polyphosphate kinase N-terminal domain K3X25_03330 PF01594 AI-2E family transporter K3X25_03340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K3X25_03340 PF07992 Pyridine nucleotide-disulphide oxidoreductase K3X25_03345 PF03129 Anticodon binding domain K3X25_03345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K3X25_03355 PF02222 ATP-grasp domain K3X25_03355 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain K3X25_03360 PF00731 AIR carboxylase K3X25_03370 PF00011 Hsp20/alpha crystallin family K3X25_03380 PF01747 ATP-sulfurylase K3X25_03380 PF14306 PUA-like domain K3X25_03390 PF07992 Pyridine nucleotide-disulphide oxidoreductase K3X25_03395 PF01037 Lrp/AsnC ligand binding domain K3X25_03405 PF02578 Multi-copper polyphenol oxidoreductase laccase K3X25_03415 PF01790 Prolipoprotein diacylglyceryl transferase K3X25_03430 PF03167 Uracil DNA glycosylase superfamily K3X25_03445 PF06965 Na+/H+ antiporter 1 K3X25_03450 PF00005 ABC transporter K3X25_03460 PF00793 DAHP synthetase I family K3X25_03470 PF00535 Glycosyl transferase family 2 K3X25_03485 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K3X25_03485 PF00391 PEP-utilising enzyme, mobile domain K3X25_03505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K3X25_03515 PF03951 Glutamine synthetase, beta-Grasp domain K3X25_03515 PF00120 Glutamine synthetase, catalytic domain K3X25_03520 PF00171 Aldehyde dehydrogenase family K3X25_03525 PF00465 Iron-containing alcohol dehydrogenase K3X25_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_03530 PF00512 His Kinase A (phospho-acceptor) domain K3X25_03530 PF08448 PAS fold K3X25_03530 PF13188 PAS domain K3X25_03530 PF00072 Response regulator receiver domain K3X25_03540 PF02779 Transketolase, pyrimidine binding domain K3X25_03540 PF02780 Transketolase, C-terminal domain K3X25_03545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_03545 PF03466 LysR substrate binding domain K3X25_03550 PF01965 DJ-1/PfpI family K3X25_03550 PF12833 Helix-turn-helix domain K3X25_03555 PF01266 FAD dependent oxidoreductase K3X25_03560 PF00171 Aldehyde dehydrogenase family K3X25_03565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_03565 PF03466 LysR substrate binding domain K3X25_03570 PF01557 Fumarylacetoacetate (FAA) hydrolase family K3X25_03575 PF02151 UvrB/uvrC motif K3X25_03575 PF12344 Ultra-violet resistance protein B K3X25_03575 PF17757 UvrB interaction domain K3X25_03575 PF00271 Helicase conserved C-terminal domain K3X25_03575 PF04851 Type III restriction enzyme, res subunit K3X25_03585 PF00561 alpha/beta hydrolase fold K3X25_03595 PF05675 Protein of unknown function (DUF817) K3X25_03605 PF00464 Serine hydroxymethyltransferase K3X25_03610 PF01513 ATP-NAD kinase K3X25_03620 PF00072 Response regulator receiver domain K3X25_03620 PF02954 Bacterial regulatory protein, Fis family K3X25_03620 PF00158 Sigma-54 interaction domain K3X25_03625 PF13193 AMP-binding enzyme C-terminal domain K3X25_03625 PF16177 Acetyl-coenzyme A synthetase N-terminus K3X25_03625 PF00501 AMP-binding enzyme K3X25_03630 PF03949 Malic enzyme, NAD binding domain K3X25_03630 PF00390 Malic enzyme, N-terminal domain K3X25_03630 PF01515 Phosphate acetyl/butaryl transferase K3X25_03635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K3X25_03640 PF01676 Metalloenzyme superfamily K3X25_03645 PF00962 Adenosine/AMP deaminase K3X25_03665 PF00501 AMP-binding enzyme K3X25_03665 PF13193 AMP-binding enzyme C-terminal domain K3X25_03670 PF00892 EamA-like transporter family K3X25_03680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K3X25_03680 PF00378 Enoyl-CoA hydratase/isomerase K3X25_03680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K3X25_03690 PF02803 Thiolase, C-terminal domain K3X25_03690 PF00108 Thiolase, N-terminal domain K3X25_03695 PF00043 Glutathione S-transferase, C-terminal domain K3X25_03695 PF02798 Glutathione S-transferase, N-terminal domain K3X25_03705 PF02770 Acyl-CoA dehydrogenase, middle domain K3X25_03705 PF12806 Acetyl-CoA dehydrogenase C-terminal like K3X25_03705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K3X25_03705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K3X25_03720 PF09278 MerR, DNA binding K3X25_03720 PF00376 MerR family regulatory protein K3X25_03740 PF01554 MatE K3X25_03745 PF03960 ArsC family K3X25_03750 PF01180 Dihydroorotate dehydrogenase K3X25_03760 PF07883 Cupin domain K3X25_03760 PF05899 Protein of unknown function (DUF861) K3X25_03770 PF04115 Ureidoglycolate lyase K3X25_03780 PF02872 5'-nucleotidase, C-terminal domain K3X25_03780 PF00149 Calcineurin-like phosphoesterase K3X25_03790 PF02586 SOS response associated peptidase (SRAP) K3X25_03795 PF01425 Amidase K3X25_03800 PF00501 AMP-binding enzyme K3X25_03800 PF13193 AMP-binding enzyme C-terminal domain K3X25_03805 PF00120 Glutamine synthetase, catalytic domain K3X25_03810 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_03815 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_03820 PF00005 ABC transporter K3X25_03820 PF08402 TOBE domain K3X25_03825 PF13416 Bacterial extracellular solute-binding protein K3X25_03835 PF00202 Aminotransferase class-III K3X25_03840 PF01965 DJ-1/PfpI family K3X25_03840 PF12833 Helix-turn-helix domain K3X25_03850 PF14489 QueF-like protein K3X25_03855 PF04055 Radical SAM superfamily K3X25_03860 PF01242 6-pyruvoyl tetrahydropterin synthase K3X25_03865 PF06508 Queuosine biosynthesis protein QueC K3X25_03900 PF00271 Helicase conserved C-terminal domain K3X25_03900 PF00176 SNF2 family N-terminal domain K3X25_03945 PF03432 Relaxase/Mobilisation nuclease domain K3X25_03955 PF02463 RecF/RecN/SMC N terminal domain K3X25_03980 PF00437 Type II/IV secretion system protein K3X25_03985 PF03743 Bacterial conjugation TrbI-like protein K3X25_04005 PF01551 Peptidase family M23 K3X25_04005 PF01464 Transglycosylase SLT domain K3X25_04005 PF10145 Phage-related minor tail protein K3X25_04010 PF03135 CagE, TrbE, VirB family, component of type IV transporter system K3X25_04025 PF01464 Transglycosylase SLT domain K3X25_04115 PF07685 CobB/CobQ-like glutamine amidotransferase domain K3X25_04125 PF09285 Elongation factor P, C-terminal K3X25_04125 PF08207 Elongation factor P (EF-P) KOW-like domain K3X25_04125 PF01132 Elongation factor P (EF-P) OB domain K3X25_04130 PF00849 RNA pseudouridylate synthase K3X25_04135 PF01571 Aminomethyltransferase folate-binding domain K3X25_04140 PF00005 ABC transporter K3X25_04140 PF00664 ABC transporter transmembrane region K3X25_04150 PF00155 Aminotransferase class I and II K3X25_04155 PF08264 Anticodon-binding domain of tRNA K3X25_04155 PF00133 tRNA synthetases class I (I, L, M and V) K3X25_04155 PF10458 Valyl tRNA synthetase tRNA binding arm K3X25_04160 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K3X25_04160 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K3X25_04160 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K3X25_04160 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K3X25_04165 PF13404 AsnC-type helix-turn-helix domain K3X25_04165 PF01037 Lrp/AsnC ligand binding domain K3X25_04170 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K3X25_04170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K3X25_04180 PF02219 Methylenetetrahydrofolate reductase K3X25_04185 PF03466 LysR substrate binding domain K3X25_04185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_04190 PF00459 Inositol monophosphatase family K3X25_04215 PF00005 ABC transporter K3X25_04230 PF00557 Metallopeptidase family M24 K3X25_04230 PF01321 Creatinase/Prolidase N-terminal domain K3X25_04235 PF00005 ABC transporter K3X25_04235 PF08402 TOBE domain K3X25_04245 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_04250 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_04255 PF00574 Clp protease K3X25_04260 PF06689 ClpX C4-type zinc finger K3X25_04260 PF07724 AAA domain (Cdc48 subfamily) K3X25_04260 PF10431 C-terminal, D2-small domain, of ClpB protein K3X25_04280 PF03588 Leucyl/phenylalanyl-tRNA protein transferase K3X25_04285 PF02785 Biotin carboxylase C-terminal domain K3X25_04285 PF00289 Biotin carboxylase, N-terminal domain K3X25_04285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K3X25_04290 PF00364 Biotin-requiring enzyme K3X25_04300 PF00440 Bacterial regulatory proteins, tetR family K3X25_04300 PF08362 YcdC-like protein, C-terminal region K3X25_04305 PF00196 Bacterial regulatory proteins, luxR family K3X25_04305 PF00072 Response regulator receiver domain K3X25_04315 PF00501 AMP-binding enzyme K3X25_04315 PF13193 AMP-binding enzyme C-terminal domain K3X25_04325 PF16177 Acetyl-coenzyme A synthetase N-terminus K3X25_04325 PF00501 AMP-binding enzyme K3X25_04325 PF13193 AMP-binding enzyme C-terminal domain K3X25_04330 PF00005 ABC transporter K3X25_04335 PF12399 Branched-chain amino acid ATP-binding cassette transporter K3X25_04335 PF00005 ABC transporter K3X25_04345 PF02653 Branched-chain amino acid transport system / permease component K3X25_04355 PF06114 IrrE N-terminal-like domain K3X25_04355 PF09856 Predicted transcriptional regulator (DUF2083) K3X25_04355 PF01381 Helix-turn-helix K3X25_04360 PF00486 Transcriptional regulatory protein, C terminal K3X25_04360 PF00072 Response regulator receiver domain K3X25_04370 PF02702 Osmosensitive K+ channel His kinase sensor domain K3X25_04370 PF13493 Domain of unknown function (DUF4118) K3X25_04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_04370 PF13492 GAF domain K3X25_04370 PF00512 His Kinase A (phospho-acceptor) domain K3X25_04380 PF01258 Prokaryotic dksA/traR C4-type zinc finger K3X25_04385 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K3X25_04385 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K3X25_04385 PF00378 Enoyl-CoA hydratase/isomerase K3X25_04395 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) K3X25_04400 PF02445 Quinolinate synthetase A protein K3X25_04405 PF02910 Fumarate reductase flavoprotein C-term K3X25_04405 PF00890 FAD binding domain K3X25_04410 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain K3X25_04410 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain K3X25_04445 PF05199 GMC oxidoreductase K3X25_04445 PF00732 GMC oxidoreductase K3X25_04455 PF00672 HAMP domain K3X25_04455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K3X25_04465 PF07085 DRTGG domain K3X25_04465 PF01515 Phosphate acetyl/butaryl transferase K3X25_04470 PF01515 Phosphate acetyl/butaryl transferase K3X25_04475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K3X25_04475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K3X25_04475 PF00205 Thiamine pyrophosphate enzyme, central domain K3X25_04480 PF00155 Aminotransferase class I and II K3X25_04480 PF00392 Bacterial regulatory proteins, gntR family K3X25_04490 PF00202 Aminotransferase class-III K3X25_04495 PF00958 GMP synthase C terminal domain K3X25_04495 PF02540 NAD synthase K3X25_04495 PF00117 Glutamine amidotransferase class-I K3X25_04515 PF03061 Thioesterase superfamily K3X25_04525 PF00005 ABC transporter K3X25_04525 PF12848 ABC transporter K3X25_04535 PF01467 Cytidylyltransferase-like K3X25_04545 PF02798 Glutathione S-transferase, N-terminal domain K3X25_04555 PF01921 tRNA synthetases class I (K) K3X25_04560 PF13229 Right handed beta helix region K3X25_04560 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) K3X25_04560 PF12708 Pectate lyase superfamily protein K3X25_04565 PF03976 Polyphosphate kinase 2 (PPK2) K3X25_04570 PF13406 Transglycosylase SLT domain K3X25_04575 PF01554 MatE K3X25_04585 PF00155 Aminotransferase class I and II K3X25_04610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K3X25_04625 PF02511 Thymidylate synthase complementing protein K3X25_04635 PF00313 'Cold-shock' DNA-binding domain K3X25_04640 PF03960 ArsC family K3X25_04660 PF05114 Protein of unknown function (DUF692) K3X25_04670 PF02824 TGS domain K3X25_04670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K3X25_04670 PF03129 Anticodon binding domain K3X25_04670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K3X25_04685 PF00561 alpha/beta hydrolase fold K3X25_04695 PF00561 alpha/beta hydrolase fold K3X25_04695 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K3X25_04710 PF01726 LexA DNA binding domain K3X25_04710 PF00717 Peptidase S24-like K3X25_04715 PF00994 Probable molybdopterin binding domain K3X25_04715 PF03453 MoeA N-terminal region (domain I and II) K3X25_04715 PF03454 MoeA C-terminal region (domain IV) K3X25_04720 PF01967 MoaC family K3X25_04725 PF00218 Indole-3-glycerol phosphate synthase K3X25_04730 PF03167 Uracil DNA glycosylase superfamily K3X25_04735 PF02885 Glycosyl transferase family, helical bundle domain K3X25_04735 PF00591 Glycosyl transferase family, a/b domain K3X25_04740 PF00117 Glutamine amidotransferase class-I K3X25_04760 PF00113 Enolase, C-terminal TIM barrel domain K3X25_04760 PF03952 Enolase, N-terminal domain K3X25_04765 PF00892 EamA-like transporter family K3X25_04770 PF01475 Ferric uptake regulator family K3X25_04775 PF02567 Phenazine biosynthesis-like protein K3X25_04780 PF00999 Sodium/hydrogen exchanger family K3X25_04790 PF02696 Uncharacterized ACR, YdiU/UPF0061 family K3X25_04795 PF00583 Acetyltransferase (GNAT) family K3X25_04800 PF01156 Inosine-uridine preferring nucleoside hydrolase K3X25_04815 PF01521 Iron-sulphur cluster biosynthesis K3X25_04820 PF13286 Phosphohydrolase-associated domain K3X25_04820 PF01966 HD domain K3X25_04825 PF03485 Arginyl tRNA synthetase N terminal domain K3X25_04825 PF05746 DALR anticodon binding domain K3X25_04825 PF00750 tRNA synthetases class I (R) K3X25_04835 PF00933 Glycosyl hydrolase family 3 N terminal domain K3X25_04840 PF02616 Segregation and condensation protein ScpA K3X25_04845 PF04079 Segregation and condensation complex subunit ScpB K3X25_04855 PF00692 dUTPase K3X25_04870 PF00216 Bacterial DNA-binding protein K3X25_04875 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K3X25_04875 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K3X25_04880 PF02504 Fatty acid synthesis protein K3X25_04885 PF01783 Ribosomal L32p protein family K3X25_04900 PF01641 SelR domain K3X25_04910 PF16326 ABC transporter C-terminal domain K3X25_04910 PF00005 ABC transporter K3X25_04920 PF03006 Haemolysin-III related K3X25_04925 PF00282 Pyridoxal-dependent decarboxylase conserved domain K3X25_04930 PF00121 Triosephosphate isomerase K3X25_04935 PF00156 Phosphoribosyl transferase domain K3X25_04940 PF01521 Iron-sulphur cluster biosynthesis K3X25_04955 PF01883 Iron-sulfur cluster assembly protein K3X25_04960 PF01702 Queuine tRNA-ribosyltransferase K3X25_04970 PF00004 ATPase family associated with various cellular activities (AAA) K3X25_04970 PF05362 Lon protease (S16) C-terminal proteolytic domain K3X25_04970 PF02190 ATP-dependent protease La (LON) substrate-binding domain K3X25_04995 PF00300 Histidine phosphatase superfamily (branch 1) K3X25_05020 PF00155 Aminotransferase class I and II K3X25_05030 PF04551 GcpE protein K3X25_05040 PF03652 Holliday junction resolvase K3X25_05050 PF01266 FAD dependent oxidoreductase K3X25_05060 PF07992 Pyridine nucleotide-disulphide oxidoreductase K3X25_05060 PF17806 Sarcosine oxidase A3 domain K3X25_05060 PF01571 Aminomethyltransferase folate-binding domain K3X25_05060 PF08669 Glycine cleavage T-protein C-terminal barrel domain K3X25_05095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain K3X25_05095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain K3X25_05105 PF00892 EamA-like transporter family K3X25_05110 PF03641 Possible lysine decarboxylase K3X25_05120 PF00664 ABC transporter transmembrane region K3X25_05120 PF00005 ABC transporter K3X25_05125 PF00873 AcrB/AcrD/AcrF family K3X25_05145 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal K3X25_05145 PF01926 50S ribosome-binding GTPase K3X25_05160 PF01975 Survival protein SurE K3X25_05165 PF00106 short chain dehydrogenase K3X25_05180 PF13537 Glutamine amidotransferase domain K3X25_05180 PF00156 Phosphoribosyl transferase domain K3X25_05190 PF06745 KaiC K3X25_05190 PF18073 Rubredoxin metal binding domain K3X25_05205 PF00005 ABC transporter K3X25_05210 PF02405 Permease MlaE K3X25_05215 PF01168 Alanine racemase, N-terminal domain K3X25_05215 PF00842 Alanine racemase, C-terminal domain K3X25_05235 PF00120 Glutamine synthetase, catalytic domain K3X25_05235 PF03951 Glutamine synthetase, beta-Grasp domain K3X25_05240 PF00543 Nitrogen regulatory protein P-II K3X25_05245 PF03853 YjeF-related protein N-terminus K3X25_05265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K3X25_05265 PF05698 Bacterial trigger factor protein (TF) C-terminus K3X25_05265 PF05697 Bacterial trigger factor protein (TF) K3X25_05275 PF03948 Ribosomal protein L9, C-terminal domain K3X25_05275 PF01281 Ribosomal protein L9, N-terminal domain K3X25_05280 PF01084 Ribosomal protein S18 K3X25_05285 PF01250 Ribosomal protein S6 K3X25_05295 PF00698 Acyl transferase domain K3X25_05305 PF00550 Phosphopantetheine attachment site K3X25_05310 PF00109 Beta-ketoacyl synthase, N-terminal domain K3X25_05310 PF02801 Beta-ketoacyl synthase, C-terminal domain K3X25_05315 PF02618 YceG-like family K3X25_05330 PF04860 Phage portal protein K3X25_05405 PF01258 Prokaryotic dksA/traR C4-type zinc finger K3X25_05415 PF00132 Bacterial transferase hexapeptide (six repeats) K3X25_05415 PF06426 Serine acetyltransferase, N-terminal K3X25_05425 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K3X25_05425 PF00364 Biotin-requiring enzyme K3X25_05425 PF02817 e3 binding domain K3X25_05430 PF00364 Biotin-requiring enzyme K3X25_05430 PF02780 Transketolase, C-terminal domain K3X25_05430 PF02779 Transketolase, pyrimidine binding domain K3X25_05435 PF00676 Dehydrogenase E1 component K3X25_05445 PF00274 Fructose-bisphosphate aldolase class-I K3X25_05455 PF00162 Phosphoglycerate kinase K3X25_05460 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K3X25_05465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K3X25_05475 PF00425 chorismate binding enzyme K3X25_05475 PF04715 Anthranilate synthase component I, N terminal region K3X25_05485 PF00155 Aminotransferase class I and II K3X25_05490 PF00579 tRNA synthetases class I (W and Y) K3X25_05495 PF03702 Anhydro-N-acetylmuramic acid kinase K3X25_05505 PF05195 Aminopeptidase P, N-terminal domain K3X25_05505 PF00557 Metallopeptidase family M24 K3X25_05510 PF07687 Peptidase dimerisation domain K3X25_05510 PF01546 Peptidase family M20/M25/M40 K3X25_05515 PF06213 Cobalamin biosynthesis protein CobT K3X25_05515 PF11775 Cobalamin biosynthesis protein CobT VWA domain K3X25_05520 PF00565 Staphylococcal nuclease homologue K3X25_05525 PF07728 AAA domain (dynein-related subfamily) K3X25_05525 PF08406 CbbQ/NirQ/NorQ C-terminal K3X25_05525 PF12556 Cobaltochelatase CobS subunit N terminal K3X25_05530 PF00226 DnaJ domain K3X25_05545 PF01136 Peptidase family U32 K3X25_05545 PF16325 Peptidase family U32 C-terminal domain K3X25_05550 PF02934 GatB/GatE catalytic domain K3X25_05550 PF02637 GatB domain K3X25_05555 PF17432 Domain of unknown function (DUF3458_C) ARM repeats K3X25_05555 PF01433 Peptidase family M1 domain K3X25_05555 PF11940 Domain of unknown function (DUF3458) Ig-like fold K3X25_05560 PF01274 Malate synthase K3X25_05565 PF03928 Haem-degrading K3X25_05570 PF04070 Domain of unknown function (DUF378) K3X25_05575 PF02469 Fasciclin domain K3X25_05600 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K3X25_05600 PF00034 Cytochrome c K3X25_05600 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase K3X25_05605 PF00111 2Fe-2S iron-sulfur cluster binding domain K3X25_05605 PF01799 [2Fe-2S] binding domain K3X25_05610 PF00440 Bacterial regulatory proteins, tetR family K3X25_05610 PF08361 MAATS-type transcriptional repressor, C-terminal region K3X25_05615 PF00155 Aminotransferase class I and II K3X25_05625 PF01520 N-acetylmuramoyl-L-alanine amidase K3X25_05625 PF11741 AMIN domain K3X25_05630 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K3X25_05630 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain K3X25_05650 PF02678 Pirin K3X25_05650 PF05726 Pirin C-terminal cupin domain K3X25_05660 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch K3X25_05660 PF01262 Alanine dehydrogenase/PNT, C-terminal domain K3X25_05660 PF05222 Alanine dehydrogenase/PNT, N-terminal domain K3X25_05665 PF02233 NAD(P) transhydrogenase beta subunit K3X25_05675 PF01098 Cell cycle protein K3X25_05680 PF03033 Glycosyltransferase family 28 N-terminal domain K3X25_05680 PF04101 Glycosyltransferase family 28 C-terminal domain K3X25_05685 PF02875 Mur ligase family, glutamate ligase domain K3X25_05685 PF01225 Mur ligase family, catalytic domain K3X25_05685 PF08245 Mur ligase middle domain K3X25_05700 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K3X25_05700 PF01565 FAD binding domain K3X25_05705 PF07478 D-ala D-ala ligase C-terminus K3X25_05705 PF01820 D-ala D-ala ligase N-terminus K3X25_05710 PF03799 Cell division protein FtsQ K3X25_05715 PF02491 SHS2 domain inserted in FTSA K3X25_05720 PF12327 FtsZ family, C-terminal domain K3X25_05720 PF00091 Tubulin/FtsZ family, GTPase domain K3X25_05725 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase K3X25_05730 PF13525 Outer membrane lipoprotein K3X25_05735 PF02463 RecF/RecN/SMC N terminal domain K3X25_05740 PF01565 FAD binding domain K3X25_05740 PF02913 FAD linked oxidases, C-terminal domain K3X25_05745 PF00654 Voltage gated chloride channel K3X25_05750 PF00398 Ribosomal RNA adenine dimethylase K3X25_05755 PF04166 Pyridoxal phosphate biosynthetic protein PdxA K3X25_05765 PF04453 LPS transport system D K3X25_05765 PF03968 OstA-like protein K3X25_05780 PF00883 Cytosol aminopeptidase family, catalytic domain K3X25_05795 PF01914 MarC family integral membrane protein K3X25_05800 PF12848 ABC transporter K3X25_05800 PF00005 ABC transporter K3X25_05805 PF00334 Nucleoside diphosphate kinase K3X25_05840 PF00072 Response regulator receiver domain K3X25_05840 PF01627 Hpt domain K3X25_05840 PF00512 His Kinase A (phospho-acceptor) domain K3X25_05840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_05840 PF00672 HAMP domain K3X25_05845 PF00072 Response regulator receiver domain K3X25_05845 PF00486 Transcriptional regulatory protein, C terminal K3X25_05850 PF00384 Molybdopterin oxidoreductase K3X25_05850 PF18364 Molybdopterin oxidoreductase N-terminal domain K3X25_05850 PF01568 Molydopterin dinucleotide binding domain K3X25_05855 PF01207 Dihydrouridine synthase (Dus) K3X25_05860 PF01925 Sulfite exporter TauE/SafE K3X25_05885 PF02515 CoA-transferase family III K3X25_05910 PF02219 Methylenetetrahydrofolate reductase K3X25_05920 PF02541 Ppx/GppA phosphatase family K3X25_05925 PF01728 FtsJ-like methyltransferase K3X25_05935 PF01037 Lrp/AsnC ligand binding domain K3X25_05965 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K3X25_05965 PF00132 Bacterial transferase hexapeptide (six repeats) K3X25_05970 PF00550 Phosphopantetheine attachment site K3X25_05975 PF00109 Beta-ketoacyl synthase, N-terminal domain K3X25_05975 PF02801 Beta-ketoacyl synthase, C-terminal domain K3X25_05985 PF05872 Bacterial protein of unknown function (DUF853) K3X25_05990 PF00571 CBS domain K3X25_05990 PF03471 Transporter associated domain K3X25_05990 PF01595 Cyclin M transmembrane N-terminal domain K3X25_06000 PF00909 Ammonium Transporter Family K3X25_06040 PF00672 HAMP domain K3X25_06040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_06040 PF00512 His Kinase A (phospho-acceptor) domain K3X25_06045 PF00596 Class II Aldolase and Adducin N-terminal domain K3X25_06055 PF00586 AIR synthase related protein, N-terminal domain K3X25_06055 PF02769 AIR synthase related protein, C-terminal domain K3X25_06060 PF00551 Formyl transferase K3X25_06065 PF01612 3'-5' exonuclease K3X25_06065 PF00570 HRDC domain K3X25_06075 PF02657 Fe-S metabolism associated domain K3X25_06090 PF02607 B12 binding domain K3X25_06090 PF02310 B12 binding domain K3X25_06095 PF04055 Radical SAM superfamily K3X25_06100 PF02607 B12 binding domain K3X25_06100 PF02310 B12 binding domain K3X25_06100 PF02574 Homocysteine S-methyltransferase K3X25_06100 PF02965 Vitamin B12 dependent methionine synthase, activation domain K3X25_06100 PF00809 Pterin binding enzyme K3X25_06115 PF01259 SAICAR synthetase K3X25_06120 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase K3X25_06130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_06130 PF02743 Cache domain K3X25_06130 PF00512 His Kinase A (phospho-acceptor) domain K3X25_06135 PF02954 Bacterial regulatory protein, Fis family K3X25_06135 PF00072 Response regulator receiver domain K3X25_06135 PF00158 Sigma-54 interaction domain K3X25_06140 PF13181 Tetratricopeptide repeat K3X25_06145 PF00829 Ribosomal prokaryotic L21 protein K3X25_06150 PF01016 Ribosomal L27 protein K3X25_06170 PF01926 50S ribosome-binding GTPase K3X25_06170 PF01018 GTP1/OBG K3X25_06175 PF01472 PUA domain K3X25_06175 PF00696 Amino acid kinase family K3X25_06180 PF00171 Aldehyde dehydrogenase family K3X25_06185 PF10090 Histidine phosphotransferase C-terminal domain K3X25_06220 PF02600 Disulfide bond formation protein DsbB K3X25_06225 PF09335 SNARE associated Golgi protein K3X25_06230 PF04228 Putative neutral zinc metallopeptidase K3X25_06245 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K3X25_06255 PF01053 Cys/Met metabolism PLP-dependent enzyme K3X25_06285 PF02653 Branched-chain amino acid transport system / permease component K3X25_06290 PF00005 ABC transporter K3X25_06295 PF00005 ABC transporter K3X25_06295 PF12399 Branched-chain amino acid ATP-binding cassette transporter K3X25_06300 PF13458 Periplasmic binding protein K3X25_06310 PF12833 Helix-turn-helix domain K3X25_06310 PF01965 DJ-1/PfpI family K3X25_06315 PF01474 Class-II DAHP synthetase family K3X25_06325 PF03755 YicC-like family, N-terminal region K3X25_06325 PF08340 Domain of unknown function (DUF1732) K3X25_06330 PF00625 Guanylate kinase K3X25_06335 PF00132 Bacterial transferase hexapeptide (six repeats) K3X25_06340 PF08534 Redoxin K3X25_06345 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family K3X25_06345 PF04055 Radical SAM superfamily K3X25_06355 PF00156 Phosphoribosyl transferase domain K3X25_06360 PF03364 Polyketide cyclase / dehydrase and lipid transport K3X25_06365 PF00589 Phage integrase family K3X25_06365 PF02899 Phage integrase, N-terminal SAM-like domain K3X25_06380 PF01202 Shikimate kinase K3X25_06385 PF01761 3-dehydroquinate synthase K3X25_06390 PF02464 Competence-damaged protein K3X25_06390 PF18146 Damage-inducible protein CinA KH domain K3X25_06390 PF00994 Probable molybdopterin binding domain K3X25_06400 PF02542 YgbB family K3X25_06400 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K3X25_06405 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K3X25_06410 PF01207 Dihydrouridine synthase (Dus) K3X25_06415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_06415 PF00512 His Kinase A (phospho-acceptor) domain K3X25_06420 PF14532 Sigma-54 interaction domain K3X25_06420 PF02954 Bacterial regulatory protein, Fis family K3X25_06420 PF00072 Response regulator receiver domain K3X25_06425 PF00989 PAS fold K3X25_06425 PF00672 HAMP domain K3X25_06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_06425 PF00512 His Kinase A (phospho-acceptor) domain K3X25_06430 PF02954 Bacterial regulatory protein, Fis family K3X25_06430 PF00072 Response regulator receiver domain K3X25_06430 PF00158 Sigma-54 interaction domain K3X25_06435 PF02254 TrkA-N domain K3X25_06435 PF02080 TrkA-C domain K3X25_06440 PF02386 Cation transport protein K3X25_06445 PF17209 Hfq protein K3X25_06450 PF16360 GTP-binding GTPase Middle Region K3X25_06450 PF13167 GTP-binding GTPase N-terminal K3X25_06450 PF01926 50S ribosome-binding GTPase K3X25_06460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K3X25_06460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K3X25_06470 PF00490 Delta-aminolevulinic acid dehydratase K3X25_06480 PF17757 UvrB interaction domain K3X25_06480 PF00271 Helicase conserved C-terminal domain K3X25_06480 PF03461 TRCF domain K3X25_06480 PF02559 CarD-like/TRCF domain K3X25_06480 PF00270 DEAD/DEAH box helicase K3X25_06490 PF07690 Major Facilitator Superfamily K3X25_06500 PF00501 AMP-binding enzyme K3X25_06500 PF13193 AMP-binding enzyme C-terminal domain K3X25_06500 PF00668 Condensation domain K3X25_06500 PF00550 Phosphopantetheine attachment site K3X25_06505 PF01381 Helix-turn-helix K3X25_06505 PF08671 Anti-repressor SinI K3X25_06510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K3X25_06520 PF01810 LysE type translocator K3X25_06530 PF04227 Indigoidine synthase A like protein K3X25_06535 PF01467 Cytidylyltransferase-like K3X25_06535 PF00294 pfkB family carbohydrate kinase K3X25_06540 PF00318 Ribosomal protein S2 K3X25_06545 PF00889 Elongation factor TS K3X25_06555 PF01220 Dehydroquinase class II K3X25_06575 PF07733 Bacterial DNA polymerase III alpha NTPase domain K3X25_06575 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K3X25_06575 PF14579 Helix-hairpin-helix motif K3X25_06575 PF02811 PHP domain K3X25_06575 PF01336 OB-fold nucleic acid binding domain K3X25_06600 PF00211 Adenylate and Guanylate cyclase catalytic domain K3X25_06610 PF00282 Pyridoxal-dependent decarboxylase conserved domain K3X25_06660 PF01266 FAD dependent oxidoreductase K3X25_06665 PF04267 Sarcosine oxidase, delta subunit family K3X25_06670 PF08669 Glycine cleavage T-protein C-terminal barrel domain K3X25_06670 PF17806 Sarcosine oxidase A3 domain K3X25_06670 PF01571 Aminomethyltransferase folate-binding domain K3X25_06670 PF07992 Pyridine nucleotide-disulphide oxidoreductase K3X25_06680 PF01965 DJ-1/PfpI family K3X25_06680 PF12833 Helix-turn-helix domain K3X25_06690 PF00171 Aldehyde dehydrogenase family K3X25_06710 PF02615 Malate/L-lactate dehydrogenase K3X25_06715 PF02028 BCCT, betaine/carnitine/choline family transporter K3X25_06720 PF02028 BCCT, betaine/carnitine/choline family transporter K3X25_06725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K3X25_06725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K3X25_06735 PF05853 beta-keto acid cleavage enzyme K3X25_06740 PF00501 AMP-binding enzyme K3X25_06740 PF13193 AMP-binding enzyme C-terminal domain K3X25_06745 PF12833 Helix-turn-helix domain K3X25_06745 PF01965 DJ-1/PfpI family K3X25_06755 PF13569 Domain of unknown function (DUF4132) K3X25_06760 PF07728 AAA domain (dynein-related subfamily) K3X25_06770 PF05762 VWA domain containing CoxE-like protein K3X25_06780 PF00486 Transcriptional regulatory protein, C terminal K3X25_06780 PF00072 Response regulator receiver domain K3X25_06785 PF01895 PhoU domain K3X25_06790 PF00005 ABC transporter K3X25_06795 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_06800 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_06810 PF00990 Diguanylate cyclase, GGDEF domain K3X25_06815 PF16736 Single Cache-like K3X25_06815 PF00989 PAS fold K3X25_06815 PF00512 His Kinase A (phospho-acceptor) domain K3X25_06815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_06835 PF06253 Trimethylamine methyltransferase (MTTB) K3X25_06840 PF00117 Glutamine amidotransferase class-I K3X25_06840 PF00958 GMP synthase C terminal domain K3X25_06840 PF02540 NAD synthase K3X25_06865 PF04204 Homoserine O-succinyltransferase K3X25_06870 PF03976 Polyphosphate kinase 2 (PPK2) K3X25_06875 PF00440 Bacterial regulatory proteins, tetR family K3X25_06875 PF13977 BetI-type transcriptional repressor, C-terminal K3X25_06880 PF00266 Aminotransferase class-V K3X25_06895 PF01458 Uncharacterized protein family (UPF0051) K3X25_06900 PF00005 ABC transporter K3X25_06920 PF01458 Uncharacterized protein family (UPF0051) K3X25_06925 PF00266 Aminotransferase class-V K3X25_06935 PF02082 Transcriptional regulator K3X25_06940 PF02129 X-Pro dipeptidyl-peptidase (S15 family) K3X25_06960 PF02074 Carboxypeptidase Taq (M32) metallopeptidase K3X25_06965 PF02628 Cytochrome oxidase assembly protein K3X25_06970 PF03989 DNA gyrase C-terminal domain, beta-propeller K3X25_06970 PF00521 DNA gyrase/topoisomerase IV, subunit A K3X25_06980 PF01134 Glucose inhibited division protein A K3X25_06985 PF00749 tRNA synthetases class I (E and Q), catalytic domain K3X25_06990 PF01502 Phosphoribosyl-AMP cyclohydrolase K3X25_07000 PF08447 PAS fold K3X25_07000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K3X25_07000 PF13426 PAS domain K3X25_07005 PF00270 DEAD/DEAH box helicase K3X25_07005 PF00271 Helicase conserved C-terminal domain K3X25_07005 PF17191 RecG wedge domain K3X25_07010 PF12826 Helix-hairpin-helix motif K3X25_07010 PF03119 NAD-dependent DNA ligase C4 zinc finger domain K3X25_07010 PF03120 NAD-dependent DNA ligase OB-fold domain K3X25_07010 PF01653 NAD-dependent DNA ligase adenylation domain K3X25_07010 PF00533 BRCA1 C Terminus (BRCT) domain K3X25_07015 PF00072 Response regulator receiver domain K3X25_07015 PF00486 Transcriptional regulatory protein, C terminal K3X25_07035 PF02684 Lipid-A-disaccharide synthetase K3X25_07045 PF00132 Bacterial transferase hexapeptide (six repeats) K3X25_07045 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 K3X25_07050 PF07977 FabA-like domain K3X25_07060 PF01103 Surface antigen K3X25_07060 PF07244 Surface antigen variable number repeat K3X25_07070 PF17820 PDZ domain K3X25_07070 PF02163 Peptidase family M50 K3X25_07075 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase K3X25_07075 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain K3X25_07075 PF13288 DXP reductoisomerase C-terminal domain K3X25_07085 PF01255 Putative undecaprenyl diphosphate synthase K3X25_07090 PF01765 Ribosome recycling factor K3X25_07095 PF00696 Amino acid kinase family K3X25_07105 PF12833 Helix-turn-helix domain K3X25_07110 PF01464 Transglycosylase SLT domain K3X25_07115 PF00436 Single-strand binding protein family K3X25_07135 PF00768 D-alanyl-D-alanine carboxypeptidase K3X25_07135 PF07943 Penicillin-binding protein 5, C-terminal domain K3X25_07140 PF02223 Thymidylate kinase K3X25_07145 PF09115 DNA polymerase III, delta subunit, C terminal K3X25_07150 PF01026 TatD related DNase K3X25_07170 PF00108 Thiolase, N-terminal domain K3X25_07170 PF02803 Thiolase, C-terminal domain K3X25_07175 PF05138 Phenylacetic acid catabolic protein K3X25_07180 PF06243 Phenylacetic acid degradation B K3X25_07185 PF05138 Phenylacetic acid catabolic protein K3X25_07190 PF01883 Iron-sulfur cluster assembly protein K3X25_07195 PF00970 Oxidoreductase FAD-binding domain K3X25_07195 PF00111 2Fe-2S iron-sulfur cluster binding domain K3X25_07195 PF00175 Oxidoreductase NAD-binding domain K3X25_07205 PF00171 Aldehyde dehydrogenase family K3X25_07205 PF01575 MaoC like domain K3X25_07225 PF00380 Ribosomal protein S9/S16 K3X25_07230 PF00572 Ribosomal protein L13 K3X25_07245 PF00378 Enoyl-CoA hydratase/isomerase K3X25_07250 PF13230 Glutamine amidotransferases class-II K3X25_07255 PF00893 Small Multidrug Resistance protein K3X25_07260 PF00679 Elongation factor G C-terminus K3X25_07260 PF00009 Elongation factor Tu GTP binding domain K3X25_07260 PF03144 Elongation factor Tu domain 2 K3X25_07270 PF02272 DHHA1 domain K3X25_07270 PF01411 tRNA synthetases class II (A) K3X25_07270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K3X25_07275 PF00154 recA bacterial DNA recombination protein K3X25_07280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_07280 PF00072 Response regulator receiver domain K3X25_07280 PF00512 His Kinase A (phospho-acceptor) domain K3X25_07280 PF08448 PAS fold K3X25_07280 PF13188 PAS domain K3X25_07285 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF K3X25_07285 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF K3X25_07285 PF01189 16S rRNA methyltransferase RsmB/F K3X25_07290 PF00478 IMP dehydrogenase / GMP reductase domain K3X25_07290 PF00571 CBS domain K3X25_07295 PF00155 Aminotransferase class I and II K3X25_07305 PF01494 FAD binding domain K3X25_07310 PF01258 Prokaryotic dksA/traR C4-type zinc finger K3X25_07315 PF07724 AAA domain (Cdc48 subfamily) K3X25_07315 PF00004 ATPase family associated with various cellular activities (AAA) K3X25_07315 PF10431 C-terminal, D2-small domain, of ClpB protein K3X25_07315 PF17871 AAA lid domain K3X25_07315 PF02861 Clp amino terminal domain, pathogenicity island component K3X25_07335 PF12823 Domain of unknown function (DUF3817) K3X25_07360 PF10672 S-adenosylmethionine-dependent methyltransferase K3X25_07360 PF17785 PUA-like domain K3X25_07370 PF00920 Dehydratase family K3X25_07375 PF01081 KDPG and KHG aldolase K3X25_07385 PF00682 HMGL-like K3X25_07385 PF08502 LeuA allosteric (dimerisation) domain K3X25_07390 PF09190 DALR domain K3X25_07390 PF01406 tRNA synthetases class I (C) catalytic domain K3X25_07420 PF07992 Pyridine nucleotide-disulphide oxidoreductase K3X25_07420 PF18113 Rubredoxin binding C-terminal domain K3X25_07435 PF00106 short chain dehydrogenase K3X25_07440 PF01740 STAS domain K3X25_07440 PF00916 Sulfate permease family K3X25_07450 PF00753 Metallo-beta-lactamase superfamily K3X25_07460 PF04143 Sulphur transport K3X25_07470 PF00034 Cytochrome c K3X25_07475 PF00174 Oxidoreductase molybdopterin binding domain K3X25_07480 PF00149 Calcineurin-like phosphoesterase K3X25_07480 PF02872 5'-nucleotidase, C-terminal domain K3X25_07505 PF02683 Cytochrome C biogenesis protein transmembrane region K3X25_07520 PF04143 Sulphur transport K3X25_07525 PF01613 Flavin reductase like domain K3X25_07545 PF01053 Cys/Met metabolism PLP-dependent enzyme K3X25_07550 PF04402 Protein of unknown function (DUF541) K3X25_07560 PF01037 Lrp/AsnC ligand binding domain K3X25_07565 PF08447 PAS fold K3X25_07565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K3X25_07570 PF02277 Phosphoribosyltransferase K3X25_07575 PF02654 Cobalamin-5-phosphate synthase K3X25_07580 PF02559 CarD-like/TRCF domain K3X25_07585 PF11953 Domain of unknown function (DUF3470) K3X25_07585 PF00037 4Fe-4S binding domain K3X25_07590 PF01479 S4 domain K3X25_07615 PF00342 Phosphoglucose isomerase K3X25_07620 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K3X25_07625 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain K3X25_07625 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain K3X25_07630 PF00491 Arginase family K3X25_07650 PF02571 Precorrin-6x reductase CbiJ/CobK K3X25_07655 PF01888 CbiD K3X25_07660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K3X25_07665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain K3X25_07665 PF07685 CobB/CobQ-like glutamine amidotransferase domain K3X25_07670 PF07690 Major Facilitator Superfamily K3X25_07680 PF08335 GlnD PII-uridylyltransferase K3X25_07680 PF03710 Glutamate-ammonia ligase adenylyltransferase K3X25_07700 PF04377 Arginine-tRNA-protein transferase, C terminus K3X25_07700 PF04376 Arginine-tRNA-protein transferase, N terminus K3X25_07705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K3X25_07705 PF00205 Thiamine pyrophosphate enzyme, central domain K3X25_07705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K3X25_07710 PF10369 Small subunit of acetolactate synthase K3X25_07720 PF02867 Ribonucleotide reductase, barrel domain K3X25_07720 PF08471 Class II vitamin B12-dependent ribonucleotide reductase K3X25_07735 PF00313 'Cold-shock' DNA-binding domain K3X25_07740 PF01243 Pyridoxamine 5'-phosphate oxidase K3X25_07740 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region K3X25_07750 PF00156 Phosphoribosyl transferase domain K3X25_07760 PF17827 PrmC N-terminal domain K3X25_07760 PF05175 Methyltransferase small domain K3X25_07765 PF03462 PCRF domain K3X25_07765 PF00472 RF-1 domain K3X25_07775 PF00491 Arginase family K3X25_07780 PF07687 Peptidase dimerisation domain K3X25_07780 PF01546 Peptidase family M20/M25/M40 K3X25_07785 PF03819 MazG nucleotide pyrophosphohydrolase domain K3X25_07790 PF13416 Bacterial extracellular solute-binding protein K3X25_07795 PF00293 NUDIX domain K3X25_07800 PF00005 ABC transporter K3X25_07800 PF17755 UvrA DNA-binding domain K3X25_07800 PF17760 UvrA interaction domain K3X25_07810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K3X25_07810 PF07992 Pyridine nucleotide-disulphide oxidoreductase K3X25_07825 PF02547 Queuosine biosynthesis protein K3X25_07835 PF00578 AhpC/TSA family K3X25_07840 PF04305 Protein of unknown function (DUF455) K3X25_07845 PF01476 LysM domain K3X25_07845 PF08525 Opacity-associated protein A N-terminal motif K3X25_07845 PF01551 Peptidase family M23 K3X25_07860 PF03462 PCRF domain K3X25_07860 PF00472 RF-1 domain K3X25_07865 PF00005 ABC transporter K3X25_07865 PF17912 MalK OB fold domain K3X25_07865 PF03459 TOBE domain K3X25_07870 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_07875 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_07880 PF01547 Bacterial extracellular solute-binding protein K3X25_07890 PF00072 Response regulator receiver domain K3X25_07895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_07895 PF01627 Hpt domain K3X25_07895 PF02895 Signal transducing histidine kinase, homodimeric domain K3X25_07895 PF01584 CheW-like domain K3X25_07900 PF01584 CheW-like domain K3X25_07905 PF03705 CheR methyltransferase, all-alpha domain K3X25_07905 PF01739 CheR methyltransferase, SAM binding domain K3X25_07910 PF00072 Response regulator receiver domain K3X25_07930 PF03975 CheD chemotactic sensory transduction K3X25_07935 PF00072 Response regulator receiver domain K3X25_07935 PF01339 CheB methylesterase K3X25_07940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K3X25_07940 PF00672 HAMP domain K3X25_07950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_07950 PF00672 HAMP domain K3X25_07950 PF00072 Response regulator receiver domain K3X25_07950 PF01627 Hpt domain K3X25_07950 PF00512 His Kinase A (phospho-acceptor) domain K3X25_07950 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K3X25_07965 PF07664 Ferrous iron transport protein B C terminus K3X25_07965 PF17910 FeoB cytosolic helical domain K3X25_07965 PF02421 Ferrous iron transport protein B K3X25_07965 PF07670 Nucleoside recognition K3X25_07990 PF00437 Type II/IV secretion system protein K3X25_08020 PF00263 Bacterial type II and III secretion system protein K3X25_08020 PF13629 Pilus formation protein N terminal region K3X25_08020 PF04972 BON domain K3X25_08050 PF00884 Sulfatase K3X25_08055 PF00664 ABC transporter transmembrane region K3X25_08055 PF00005 ABC transporter K3X25_08060 PF00529 HlyD membrane-fusion protein of T1SS K3X25_08065 PF00413 Matrixin K3X25_08065 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) K3X25_08065 PF08548 Peptidase M10 serralysin C terminal K3X25_08080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K3X25_08080 PF01411 tRNA synthetases class II (A) K3X25_08080 PF02272 DHHA1 domain K3X25_08085 PF12794 Mechanosensitive ion channel inner membrane domain 1 K3X25_08085 PF00924 Mechanosensitive ion channel K3X25_08085 PF12795 Mechanosensitive ion channel porin domain K3X25_08090 PF00571 CBS domain K3X25_08090 PF00291 Pyridoxal-phosphate dependent enzyme K3X25_08095 PF00293 NUDIX domain K3X25_08110 PF00266 Aminotransferase class-V K3X25_08115 PF02028 BCCT, betaine/carnitine/choline family transporter K3X25_08130 PF00107 Zinc-binding dehydrogenase K3X25_08135 PF01571 Aminomethyltransferase folate-binding domain K3X25_08135 PF08669 Glycine cleavage T-protein C-terminal barrel domain K3X25_08150 PF07729 FCD domain K3X25_08150 PF00392 Bacterial regulatory proteins, gntR family K3X25_08155 PF06940 Domain of unknown function (DUF1287) K3X25_08170 PF00206 Lyase K3X25_08170 PF10415 Fumarase C C-terminus K3X25_08190 PF00067 Cytochrome P450 K3X25_08200 PF02683 Cytochrome C biogenesis protein transmembrane region K3X25_08205 PF01206 Sulfurtransferase TusA K3X25_08210 PF00575 S1 RNA binding domain K3X25_08210 PF10150 Ribonuclease E/G family K3X25_08210 PF12111 Polyribonucleotide phosphorylase C terminal K3X25_08215 PF00905 Penicillin binding protein transpeptidase domain K3X25_08215 PF00912 Transglycosylase K3X25_08215 PF17092 Penicillin-binding protein OB-like domain K3X25_08220 PF08439 Oligopeptidase F K3X25_08220 PF01432 Peptidase family M3 K3X25_08235 PF01258 Prokaryotic dksA/traR C4-type zinc finger K3X25_08245 PF00140 Sigma-70 factor, region 1.2 K3X25_08245 PF04545 Sigma-70, region 4 K3X25_08245 PF04542 Sigma-70 region 2 K3X25_08260 PF13091 PLD-like domain K3X25_08260 PF13396 Phospholipase_D-nuclease N-terminal K3X25_08265 PF00849 RNA pseudouridylate synthase K3X25_08300 PF01029 NusB family K3X25_08305 PF00885 6,7-dimethyl-8-ribityllumazine synthase K3X25_08310 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase K3X25_08310 PF00925 GTP cyclohydrolase II K3X25_08320 PF00753 Metallo-beta-lactamase superfamily K3X25_08325 PF00677 Lumazine binding domain K3X25_08330 PF05159 Capsule polysaccharide biosynthesis protein K3X25_08340 PF05159 Capsule polysaccharide biosynthesis protein K3X25_08345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K3X25_08345 PF01872 RibD C-terminal domain K3X25_08350 PF03477 ATP cone domain K3X25_08355 PF01894 Uncharacterised protein family UPF0047 K3X25_08365 PF01738 Dienelactone hydrolase family K3X25_08375 PF03979 Sigma-70 factor, region 1.1 K3X25_08375 PF04546 Sigma-70, non-essential region K3X25_08375 PF00140 Sigma-70 factor, region 1.2 K3X25_08375 PF04542 Sigma-70 region 2 K3X25_08375 PF04539 Sigma-70 region 3 K3X25_08375 PF04545 Sigma-70, region 4 K3X25_08380 PF01807 CHC2 zinc finger K3X25_08380 PF08275 DNA primase catalytic core, N-terminal domain K3X25_08380 PF13662 Toprim domain K3X25_08380 PF08278 DNA primase DnaG DnaB-binding K3X25_08380 PF10410 DnaB-helicase binding domain of primase K3X25_08385 PF00440 Bacterial regulatory proteins, tetR family K3X25_08395 PF00742 Homoserine dehydrogenase K3X25_08395 PF01842 ACT domain K3X25_08395 PF03447 Homoserine dehydrogenase, NAD binding domain K3X25_08400 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K3X25_08405 PF00857 Isochorismatase family K3X25_08410 PF02272 DHHA1 domain K3X25_08410 PF17768 RecJ OB domain K3X25_08410 PF01368 DHH family K3X25_08420 PF03746 LamB/YcsF family K3X25_08430 PF02626 Carboxyltransferase domain, subdomain A and B K3X25_08445 PF00563 EAL domain K3X25_08445 PF00990 Diguanylate cyclase, GGDEF domain K3X25_08445 PF03707 Bacterial signalling protein N terminal repeat K3X25_08455 PF13419 Haloacid dehalogenase-like hydrolase K3X25_08465 PF00072 Response regulator receiver domain K3X25_08465 PF00990 Diguanylate cyclase, GGDEF domain K3X25_08480 PF04542 Sigma-70 region 2 K3X25_08480 PF08281 Sigma-70, region 4 K3X25_08500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K3X25_08500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K3X25_08510 PF05853 beta-keto acid cleavage enzyme K3X25_08515 PF12833 Helix-turn-helix domain K3X25_08515 PF14525 AraC-binding-like domain K3X25_08520 PF00248 Aldo/keto reductase family K3X25_08525 PF00106 short chain dehydrogenase K3X25_08535 PF00009 Elongation factor Tu GTP binding domain K3X25_08535 PF03144 Elongation factor Tu domain 2 K3X25_08535 PF16658 Class II release factor RF3, C-terminal domain K3X25_08550 PF00270 DEAD/DEAH box helicase K3X25_08550 PF00271 Helicase conserved C-terminal domain K3X25_08555 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain K3X25_08555 PF12706 Beta-lactamase superfamily domain K3X25_08555 PF17770 Ribonuclease J C-terminal domain K3X25_08560 PF03309 Type III pantothenate kinase K3X25_08565 PF03099 Biotin/lipoate A/B protein ligase family K3X25_08565 PF02237 Biotin protein ligase C terminal domain K3X25_08570 PF00361 Proton-conducting membrane transporter K3X25_08575 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus K3X25_08575 PF00361 Proton-conducting membrane transporter K3X25_08580 PF00361 Proton-conducting membrane transporter K3X25_08580 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K3X25_08585 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K3X25_08590 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K3X25_08595 PF02627 Carboxymuconolactone decarboxylase family K3X25_08600 PF12838 4Fe-4S dicluster domain K3X25_08605 PF00146 NADH dehydrogenase K3X25_08615 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal K3X25_08615 PF00384 Molybdopterin oxidoreductase K3X25_08615 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K3X25_08625 PF10531 SLBB domain K3X25_08625 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K3X25_08625 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit K3X25_08640 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit K3X25_08650 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K3X25_08655 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit K3X25_08660 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K3X25_08665 PF00378 Enoyl-CoA hydratase/isomerase K3X25_08670 PF00682 HMGL-like K3X25_08680 PF18140 Propionyl-coenzyme A carboxylase BT domain K3X25_08680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K3X25_08680 PF00364 Biotin-requiring enzyme K3X25_08680 PF00289 Biotin carboxylase, N-terminal domain K3X25_08680 PF02785 Biotin carboxylase C-terminal domain K3X25_08685 PF01039 Carboxyl transferase domain K3X25_08695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K3X25_08695 PF02770 Acyl-CoA dehydrogenase, middle domain K3X25_08695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K3X25_08700 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family K3X25_08705 PF13419 Haloacid dehalogenase-like hydrolase K3X25_08710 PF00132 Bacterial transferase hexapeptide (six repeats) K3X25_08710 PF12804 MobA-like NTP transferase domain K3X25_08715 PF01380 SIS domain K3X25_08730 PF00501 AMP-binding enzyme K3X25_08730 PF13193 AMP-binding enzyme C-terminal domain K3X25_08740 PF06463 Molybdenum Cofactor Synthesis C K3X25_08740 PF04055 Radical SAM superfamily K3X25_08745 PF07687 Peptidase dimerisation domain K3X25_08745 PF01546 Peptidase family M20/M25/M40 K3X25_08750 PF01266 FAD dependent oxidoreductase K3X25_08765 PF02875 Mur ligase family, glutamate ligase domain K3X25_08765 PF08245 Mur ligase middle domain K3X25_08770 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 K3X25_08770 PF00953 Glycosyl transferase family 4 K3X25_08775 PF01225 Mur ligase family, catalytic domain K3X25_08775 PF02875 Mur ligase family, glutamate ligase domain K3X25_08775 PF08245 Mur ligase middle domain K3X25_08780 PF01225 Mur ligase family, catalytic domain K3X25_08780 PF02875 Mur ligase family, glutamate ligase domain K3X25_08780 PF08245 Mur ligase middle domain K3X25_08785 PF03717 Penicillin-binding Protein dimerisation domain K3X25_08785 PF00905 Penicillin binding protein transpeptidase domain K3X25_08795 PF01795 MraW methylase family K3X25_08800 PF02381 MraZ protein, putative antitoxin-like K3X25_08805 PF10609 NUBPL iron-transfer P-loop NTPase K3X25_08815 PF00580 UvrD/REP helicase N-terminal domain K3X25_08815 PF13361 UvrD-like helicase C-terminal domain K3X25_08820 PF01751 Toprim domain K3X25_08820 PF01131 DNA topoisomerase K3X25_08820 PF01751 Toprim domain K3X25_08820 PF13368 Topoisomerase C-terminal repeat K3X25_08820 PF01396 Topoisomerase DNA binding C4 zinc finger K3X25_08820 PF01131 DNA topoisomerase K3X25_08820 PF01396 Topoisomerase DNA binding C4 zinc finger K3X25_08820 PF13368 Topoisomerase C-terminal repeat K3X25_08825 PF03600 Citrate transporter K3X25_08825 PF02080 TrkA-C domain K3X25_08830 PF01144 Coenzyme A transferase K3X25_08845 PF01144 Coenzyme A transferase K3X25_08850 PF01209 ubiE/COQ5 methyltransferase family K3X25_08860 PF01565 FAD binding domain K3X25_08860 PF04030 D-arabinono-1,4-lactone oxidase K3X25_08865 PF00106 short chain dehydrogenase K3X25_08870 PF01040 UbiA prenyltransferase family K3X25_08900 PF04972 BON domain K3X25_08900 PF00263 Bacterial type II and III secretion system protein K3X25_08900 PF13629 Pilus formation protein N terminal region K3X25_08905 PF00691 OmpA family K3X25_08905 PF01389 OmpA-like transmembrane domain K3X25_08915 PF00437 Type II/IV secretion system protein K3X25_08955 PF00270 DEAD/DEAH box helicase K3X25_08955 PF08494 DEAD/H associated K3X25_08955 PF00271 Helicase conserved C-terminal domain K3X25_08970 PF00378 Enoyl-CoA hydratase/isomerase K3X25_08980 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain K3X25_08980 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain K3X25_08985 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain K3X25_08985 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain K3X25_08990 PF01268 Formate--tetrahydrofolate ligase K3X25_08995 PF00487 Fatty acid desaturase K3X25_09005 PF00004 ATPase family associated with various cellular activities (AAA) K3X25_09005 PF17862 AAA+ lid domain K3X25_09005 PF06480 FtsH Extracellular K3X25_09005 PF01434 Peptidase family M41 K3X25_09010 PF01171 PP-loop family K3X25_09020 PF00691 OmpA family K3X25_09025 PF04052 TolB amino-terminal domain K3X25_09025 PF07676 WD40-like Beta Propeller Repeat K3X25_09040 PF02472 Biopolymer transport protein ExbD/TolR K3X25_09045 PF01618 MotA/TolQ/ExbB proton channel family K3X25_09050 PF03061 Thioesterase superfamily K3X25_09065 PF17864 RuvB AAA lid domain K3X25_09065 PF05491 RuvB C-terminal winged helix domain K3X25_09065 PF05496 Holliday junction DNA helicase RuvB P-loop domain K3X25_09070 PF01330 RuvA N terminal domain K3X25_09070 PF07499 RuvA, C-terminal domain K3X25_09075 PF02075 Crossover junction endodeoxyribonuclease RuvC K3X25_09080 PF00890 FAD binding domain K3X25_09090 PF13180 PDZ domain K3X25_09090 PF17820 PDZ domain K3X25_09105 PF01145 SPFH domain / Band 7 family K3X25_09110 PF01145 SPFH domain / Band 7 family K3X25_09110 PF12221 Bacterial membrane protein N terminal K3X25_09115 PF07992 Pyridine nucleotide-disulphide oxidoreductase K3X25_09115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K3X25_09120 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) K3X25_09125 PF04304 Protein of unknown function (DUF454) K3X25_09130 PF03313 Serine dehydratase alpha chain K3X25_09130 PF03315 Serine dehydratase beta chain K3X25_09155 PF00709 Adenylosuccinate synthetase K3X25_09165 PF00117 Glutamine amidotransferase class-I K3X25_09165 PF06418 CTP synthase N-terminus K3X25_09185 PF00005 ABC transporter K3X25_09190 PF00497 Bacterial extracellular solute-binding proteins, family 3 K3X25_09195 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_09200 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_09205 PF00117 Glutamine amidotransferase class-I K3X25_09205 PF02540 NAD synthase K3X25_09205 PF00958 GMP synthase C terminal domain K3X25_09210 PF00120 Glutamine synthetase, catalytic domain K3X25_09215 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family K3X25_09220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_09220 PF03466 LysR substrate binding domain K3X25_09225 PF13567 Domain of unknown function (DUF4131) K3X25_09225 PF00753 Metallo-beta-lactamase superfamily K3X25_09225 PF03772 Competence protein K3X25_09230 PF00749 tRNA synthetases class I (E and Q), catalytic domain K3X25_09235 PF00285 Citrate synthase, C-terminal domain K3X25_09240 PF00378 Enoyl-CoA hydratase/isomerase K3X25_09245 PF03918 Cytochrome C biogenesis protein K3X25_09250 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal K3X25_09250 PF01578 Cytochrome C assembly protein K3X25_09275 PF03100 CcmE K3X25_09280 PF01118 Semialdehyde dehydrogenase, NAD binding domain K3X25_09280 PF02774 Semialdehyde dehydrogenase, dimerisation domain K3X25_09285 PF01177 Asp/Glu/Hydantoin racemase K3X25_09295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_09295 PF03466 LysR substrate binding domain K3X25_09300 PF00586 AIR synthase related protein, N-terminal domain K3X25_09300 PF02769 AIR synthase related protein, C-terminal domain K3X25_09300 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain K3X25_09305 PF00805 Pentapeptide repeats (8 copies) K3X25_09315 PF00462 Glutaredoxin K3X25_09330 PF02779 Transketolase, pyrimidine binding domain K3X25_09330 PF00456 Transketolase, thiamine diphosphate binding domain K3X25_09330 PF02780 Transketolase, C-terminal domain K3X25_09335 PF00892 EamA-like transporter family K3X25_09340 PF05661 Protein of unknown function (DUF808) K3X25_09345 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K3X25_09345 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K3X25_09355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K3X25_09355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K3X25_09370 PF01467 Cytidylyltransferase-like K3X25_09380 PF03466 LysR substrate binding domain K3X25_09380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_09385 PF00171 Aldehyde dehydrogenase family K3X25_09400 PF04107 Glutamate-cysteine ligase family 2(GCS2) K3X25_09405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K3X25_09405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K3X25_09405 PF02770 Acyl-CoA dehydrogenase, middle domain K3X25_09410 PF00378 Enoyl-CoA hydratase/isomerase K3X25_09415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K3X25_09415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K3X25_09430 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K3X25_09435 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component K3X25_09440 PF03480 Bacterial extracellular solute-binding protein, family 7 K3X25_09450 PF02954 Bacterial regulatory protein, Fis family K3X25_09450 PF00072 Response regulator receiver domain K3X25_09450 PF00158 Sigma-54 interaction domain K3X25_09455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_09455 PF00512 His Kinase A (phospho-acceptor) domain K3X25_09455 PF02743 Cache domain K3X25_09460 PF01037 Lrp/AsnC ligand binding domain K3X25_09470 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K3X25_09470 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K3X25_09475 PF01507 Phosphoadenosine phosphosulfate reductase family K3X25_09485 PF00175 Oxidoreductase NAD-binding domain K3X25_09485 PF00970 Oxidoreductase FAD-binding domain K3X25_09490 PF05198 Translation initiation factor IF-3, N-terminal domain K3X25_09490 PF00707 Translation initiation factor IF-3, C-terminal domain K3X25_09500 PF03458 UPF0126 domain K3X25_09505 PF13478 XdhC Rossmann domain K3X25_09505 PF02625 XdhC and CoxI family K3X25_09555 PF01979 Amidohydrolase family K3X25_09560 PF00156 Phosphoribosyl transferase domain K3X25_09565 PF03796 DnaB-like helicase C terminal domain K3X25_09565 PF00772 DnaB-like helicase N terminal domain K3X25_09570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K3X25_09585 PF10397 Adenylosuccinate lyase C-terminus K3X25_09585 PF00206 Lyase K3X25_09595 PF01706 FliG C-terminal domain K3X25_09595 PF14841 FliG middle domain K3X25_09595 PF14842 FliG N-terminal domain K3X25_09615 PF08534 Redoxin K3X25_09625 PF01578 Cytochrome C assembly protein K3X25_09630 PF03379 CcmB protein K3X25_09635 PF00005 ABC transporter K3X25_09640 PF04430 Protein of unknown function (DUF498/DUF598) K3X25_09650 PF02355 Protein export membrane protein K3X25_09655 PF02699 Preprotein translocase subunit K3X25_09665 PF02403 Seryl-tRNA synthetase N-terminal domain K3X25_09665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K3X25_09675 PF00902 Sec-independent protein translocase protein (TatC) K3X25_09680 PF02416 mttA/Hcf106 family K3X25_09685 PF02416 mttA/Hcf106 family K3X25_09695 PF00005 ABC transporter K3X25_09695 PF08402 TOBE domain K3X25_09705 PF00012 Hsp70 protein K3X25_09710 PF09334 tRNA synthetases class I (M) K3X25_09730 PF00696 Amino acid kinase family K3X25_09730 PF01842 ACT domain K3X25_09730 PF13840 ACT domain K3X25_09750 PF00291 Pyridoxal-phosphate dependent enzyme K3X25_09755 PF02896 PEP-utilising enzyme, TIM barrel domain K3X25_09755 PF05524 PEP-utilising enzyme, N-terminal K3X25_09755 PF00391 PEP-utilising enzyme, mobile domain K3X25_09770 PF01740 STAS domain K3X25_09770 PF00916 Sulfate permease family K3X25_09775 PF01048 Phosphorylase superfamily K3X25_09780 PF04235 Protein of unknown function (DUF418) K3X25_09785 PF00156 Phosphoribosyl transferase domain K3X25_09790 PF02913 FAD linked oxidases, C-terminal domain K3X25_09790 PF01565 FAD binding domain K3X25_09800 PF00675 Insulinase (Peptidase family M16) K3X25_09800 PF05193 Peptidase M16 inactive domain K3X25_09805 PF00291 Pyridoxal-phosphate dependent enzyme K3X25_09805 PF14821 Threonine synthase N terminus K3X25_09815 PF00510 Cytochrome c oxidase subunit III K3X25_09820 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 K3X25_09830 PF01040 UbiA prenyltransferase family K3X25_09835 PF02790 Cytochrome C oxidase subunit II, transmembrane domain K3X25_09835 PF00116 Cytochrome C oxidase subunit II, periplasmic domain K3X25_09840 PF01523 Putative modulator of DNA gyrase K3X25_09855 PF02481 DNA recombination-mediator protein A K3X25_09860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K3X25_09860 PF00289 Biotin carboxylase, N-terminal domain K3X25_09860 PF02785 Biotin carboxylase C-terminal domain K3X25_09860 PF02436 Conserved carboxylase domain K3X25_09860 PF00364 Biotin-requiring enzyme K3X25_09860 PF00682 HMGL-like K3X25_09880 PF01381 Helix-turn-helix K3X25_09890 PF00475 Imidazoleglycerol-phosphate dehydratase K3X25_09900 PF00117 Glutamine amidotransferase class-I K3X25_09910 PF00977 Histidine biosynthesis protein K3X25_09920 PF00977 Histidine biosynthesis protein K3X25_09925 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase K3X25_09940 PF08032 RNA 2'-O ribose methyltransferase substrate binding K3X25_09940 PF00588 SpoU rRNA Methylase family K3X25_09955 PF03459 TOBE domain K3X25_09955 PF10649 Protein of unknown function (DUF2478) K3X25_09955 PF00005 ABC transporter K3X25_09960 PF03264 NapC/NirT cytochrome c family, N-terminal region K3X25_09965 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) K3X25_09970 PF12801 4Fe-4S binding domain K3X25_09970 PF13237 4Fe-4S dicluster domain K3X25_09975 PF12800 4Fe-4S binding domain K3X25_09975 PF12838 4Fe-4S dicluster domain K3X25_09980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K3X25_09980 PF00384 Molybdopterin oxidoreductase K3X25_09980 PF01568 Molydopterin dinucleotide binding domain K3X25_09990 PF00037 4Fe-4S binding domain K3X25_09990 PF12838 4Fe-4S dicluster domain K3X25_10075 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) K3X25_10095 PF03884 DNA gyrase inhibitor YacG K3X25_10100 PF00575 S1 RNA binding domain K3X25_10100 PF10150 Ribonuclease E/G family K3X25_10105 PF02545 Maf-like protein K3X25_10110 PF01176 Translation initiation factor 1A / IF-1 K3X25_10115 PF00795 Carbon-nitrogen hydrolase K3X25_10135 PF06793 Uncharacterised protein family (UPF0262) K3X25_10140 PF00815 Histidinol dehydrogenase K3X25_10150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K3X25_10170 PF00765 Autoinducer synthase K3X25_10180 PF00501 AMP-binding enzyme K3X25_10180 PF13193 AMP-binding enzyme C-terminal domain K3X25_10185 PF00005 ABC transporter K3X25_10185 PF00664 ABC transporter transmembrane region K3X25_10190 PF10672 S-adenosylmethionine-dependent methyltransferase K3X25_10190 PF02926 THUMP domain K3X25_10190 PF01170 Putative RNA methylase family UPF0020 K3X25_10195 PF02627 Carboxymuconolactone decarboxylase family K3X25_10200 PF00392 Bacterial regulatory proteins, gntR family K3X25_10200 PF07702 UTRA domain K3X25_10210 PF12697 Alpha/beta hydrolase family K3X25_10215 PF01613 Flavin reductase like domain K3X25_10220 PF00296 Luciferase-like monooxygenase K3X25_10225 PF00171 Aldehyde dehydrogenase family K3X25_10245 PF01136 Peptidase family U32 K3X25_10255 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K3X25_10260 PF02441 Flavoprotein K3X25_10275 PF07556 Protein of unknown function (DUF1538) K3X25_10280 PF07556 Protein of unknown function (DUF1538) K3X25_10285 PF00175 Oxidoreductase NAD-binding domain K3X25_10285 PF00111 2Fe-2S iron-sulfur cluster binding domain K3X25_10285 PF00970 Oxidoreductase FAD-binding domain K3X25_10290 PF02508 Rnf-Nqr subunit, membrane protein K3X25_10295 PF02508 Rnf-Nqr subunit, membrane protein K3X25_10300 PF04205 FMN-binding domain K3X25_10305 PF03116 NQR2, RnfD, RnfE family K3X25_10310 PF11973 NQRA C-terminal domain K3X25_10310 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) K3X25_10315 PF02424 ApbE family K3X25_10330 PF00571 CBS domain K3X25_10330 PF00478 IMP dehydrogenase / GMP reductase domain K3X25_10340 PF03099 Biotin/lipoate A/B protein ligase family K3X25_10350 PF00115 Cytochrome C and Quinol oxidase polypeptide I K3X25_10365 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain K3X25_10365 PF00117 Glutamine amidotransferase class-I K3X25_10375 PF07729 FCD domain K3X25_10375 PF00392 Bacterial regulatory proteins, gntR family K3X25_10410 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain K3X25_10410 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain K3X25_10420 PF00892 EamA-like transporter family K3X25_10425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K3X25_10425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K3X25_10425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K3X25_10425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K3X25_10430 PF00809 Pterin binding enzyme K3X25_10445 PF02896 PEP-utilising enzyme, TIM barrel domain K3X25_10445 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K3X25_10445 PF00391 PEP-utilising enzyme, mobile domain K3X25_10450 PF05746 DALR anticodon binding domain K3X25_10450 PF02092 Glycyl-tRNA synthetase beta subunit K3X25_10460 PF02091 Glycyl-tRNA synthetase alpha subunit K3X25_10470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K3X25_10470 PF00205 Thiamine pyrophosphate enzyme, central domain K3X25_10470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K3X25_10475 PF02386 Cation transport protein K3X25_10485 PF02649 Type I GTP cyclohydrolase folE2 K3X25_10490 PF01053 Cys/Met metabolism PLP-dependent enzyme K3X25_10495 PF04279 Intracellular septation protein A K3X25_10505 PF02881 SRP54-type protein, helical bundle domain K3X25_10505 PF00448 SRP54-type protein, GTPase domain K3X25_10520 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit K3X25_10520 PF10531 SLBB domain K3X25_10520 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K3X25_10525 PF00487 Fatty acid desaturase K3X25_10535 PF05816 Toxic anion resistance protein (TelA) K3X25_10560 PF02580 D-Tyr-tRNA(Tyr) deacylase K3X25_10570 PF02153 Prephenate dehydrogenase K3X25_10575 PF00155 Aminotransferase class I and II K3X25_10585 PF00163 Ribosomal protein S4/S9 N-terminal domain K3X25_10585 PF01479 S4 domain K3X25_10605 PF00950 ABC 3 transport family K3X25_10610 PF00005 ABC transporter K3X25_10620 PF01297 Zinc-uptake complex component A periplasmic K3X25_10635 PF00196 Bacterial regulatory proteins, luxR family K3X25_10635 PF00072 Response regulator receiver domain K3X25_10645 PF00005 ABC transporter K3X25_10645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K3X25_10650 PF00005 ABC transporter K3X25_10650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K3X25_10655 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_10660 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_10665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K3X25_10675 PF02311 AraC-like ligand binding domain K3X25_10675 PF12833 Helix-turn-helix domain K3X25_10680 PF02538 Hydantoinase B/oxoprolinase K3X25_10685 PF05378 Hydantoinase/oxoprolinase N-terminal region K3X25_10685 PF01968 Hydantoinase/oxoprolinase K3X25_10690 PF00005 ABC transporter K3X25_10690 PF12399 Branched-chain amino acid ATP-binding cassette transporter K3X25_10695 PF00005 ABC transporter K3X25_10700 PF02653 Branched-chain amino acid transport system / permease component K3X25_10705 PF02653 Branched-chain amino acid transport system / permease component K3X25_10715 PF03477 ATP cone domain K3X25_10715 PF02867 Ribonucleotide reductase, barrel domain K3X25_10715 PF00317 Ribonucleotide reductase, all-alpha domain K3X25_10725 PF01063 Amino-transferase class IV K3X25_10740 PF02080 TrkA-C domain K3X25_10740 PF03600 Citrate transporter K3X25_10750 PF13277 YmdB-like protein K3X25_10755 PF01106 NifU-like domain K3X25_10760 PF00814 Glycoprotease family K3X25_10770 PF02608 ABC transporter substrate-binding protein PnrA-like K3X25_10775 PF00005 ABC transporter K3X25_10780 PF02653 Branched-chain amino acid transport system / permease component K3X25_10785 PF02653 Branched-chain amino acid transport system / permease component K3X25_10790 PF01048 Phosphorylase superfamily K3X25_10795 PF01925 Sulfite exporter TauE/SafE K3X25_10815 PF00765 Autoinducer synthase K3X25_10830 PF00107 Zinc-binding dehydrogenase K3X25_10830 PF08240 Alcohol dehydrogenase GroES-like domain K3X25_10835 PF01553 Acyltransferase K3X25_10840 PF01642 Methylmalonyl-CoA mutase K3X25_10840 PF02310 B12 binding domain K3X25_10850 PF01048 Phosphorylase superfamily K3X25_10860 PF03459 TOBE domain K3X25_10860 PF10649 Protein of unknown function (DUF2478) K3X25_10860 PF00005 ABC transporter K3X25_10865 PF00873 AcrB/AcrD/AcrF family K3X25_10875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K3X25_10875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K3X25_10880 PF00171 Aldehyde dehydrogenase family K3X25_10885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K3X25_10885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K3X25_10885 PF02770 Acyl-CoA dehydrogenase, middle domain K3X25_10890 PF00202 Aminotransferase class-III K3X25_10895 PF06114 IrrE N-terminal-like domain K3X25_10895 PF01381 Helix-turn-helix K3X25_10895 PF09856 Predicted transcriptional regulator (DUF2083) K3X25_10900 PF02515 CoA-transferase family III K3X25_10905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K3X25_10920 PF02798 Glutathione S-transferase, N-terminal domain K3X25_10925 PF00512 His Kinase A (phospho-acceptor) domain K3X25_10925 PF08448 PAS fold K3X25_10925 PF13188 PAS domain K3X25_10925 PF00072 Response regulator receiver domain K3X25_10925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_10930 PF00072 Response regulator receiver domain K3X25_10995 PF04264 YceI-like domain K3X25_11005 PF06071 Protein of unknown function (DUF933) K3X25_11005 PF01926 50S ribosome-binding GTPase K3X25_11015 PF00290 Tryptophan synthase alpha chain K3X25_11020 PF01070 FMN-dependent dehydrogenase K3X25_11030 PF00270 DEAD/DEAH box helicase K3X25_11030 PF00271 Helicase conserved C-terminal domain K3X25_11045 PF01386 Ribosomal L25p family K3X25_11045 PF14693 Ribosomal protein TL5, C-terminal domain K3X25_11055 PF01195 Peptidyl-tRNA hydrolase K3X25_11070 PF00291 Pyridoxal-phosphate dependent enzyme K3X25_11075 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K3X25_11085 PF00216 Bacterial DNA-binding protein K3X25_11090 PF00575 S1 RNA binding domain K3X25_11100 PF02224 Cytidylate kinase K3X25_11120 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K3X25_11125 PF02390 Putative methyltransferase K3X25_11130 PF02773 S-adenosylmethionine synthetase, C-terminal domain K3X25_11130 PF02772 S-adenosylmethionine synthetase, central domain K3X25_11130 PF00438 S-adenosylmethionine synthetase, N-terminal domain K3X25_11135 PF00795 Carbon-nitrogen hydrolase K3X25_11140 PF00571 CBS domain K3X25_11140 PF03471 Transporter associated domain K3X25_11145 PF02130 Uncharacterized protein family UPF0054 K3X25_11150 PF02562 PhoH-like protein K3X25_11165 PF00919 Uncharacterized protein family UPF0004 K3X25_11165 PF01938 TRAM domain K3X25_11165 PF04055 Radical SAM superfamily K3X25_11175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K3X25_11180 PF01475 Ferric uptake regulator family K3X25_11185 PF07977 FabA-like domain K3X25_11190 PF02801 Beta-ketoacyl synthase, C-terminal domain K3X25_11190 PF00109 Beta-ketoacyl synthase, N-terminal domain K3X25_11200 PF12697 Alpha/beta hydrolase family K3X25_11205 PF00291 Pyridoxal-phosphate dependent enzyme K3X25_11215 PF08386 TAP-like protein K3X25_11215 PF00561 alpha/beta hydrolase fold K3X25_11220 PF00107 Zinc-binding dehydrogenase K3X25_11220 PF08240 Alcohol dehydrogenase GroES-like domain K3X25_11225 PF00977 Histidine biosynthesis protein K3X25_11230 PF09278 MerR, DNA binding K3X25_11230 PF00376 MerR family regulatory protein K3X25_11235 PF00873 AcrB/AcrD/AcrF family K3X25_11240 PF13533 Biotin-lipoyl like K3X25_11260 PF08274 PhnA Zinc-Ribbon K3X25_11260 PF03831 PhnA domain K3X25_11275 PF00679 Elongation factor G C-terminus K3X25_11275 PF00009 Elongation factor Tu GTP binding domain K3X25_11275 PF03144 Elongation factor Tu domain 2 K3X25_11275 PF06421 GTP-binding protein LepA C-terminus K3X25_11285 PF01037 Lrp/AsnC ligand binding domain K3X25_11290 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K3X25_11290 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain K3X25_11295 PF00294 pfkB family carbohydrate kinase K3X25_11305 PF01451 Low molecular weight phosphotyrosine protein phosphatase K3X25_11310 PF01638 HxlR-like helix-turn-helix K3X25_11315 PF02146 Sir2 family K3X25_11330 PF00830 Ribosomal L28 family K3X25_11340 PF00664 ABC transporter transmembrane region K3X25_11340 PF00005 ABC transporter K3X25_11350 PF00270 DEAD/DEAH box helicase K3X25_11350 PF04408 Helicase associated domain (HA2) K3X25_11350 PF00271 Helicase conserved C-terminal domain K3X25_11350 PF08482 ATP-dependent helicase C-terminal K3X25_11360 PF01384 Phosphate transporter family K3X25_11370 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K3X25_11370 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K3X25_11375 PF00202 Aminotransferase class-III K3X25_11395 PF00919 Uncharacterized protein family UPF0004 K3X25_11395 PF04055 Radical SAM superfamily K3X25_11395 PF18693 TRAM domain K3X25_11410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K3X25_11410 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K3X25_11410 PF02142 MGS-like domain K3X25_11415 PF04715 Anthranilate synthase component I, N terminal region K3X25_11415 PF00425 chorismate binding enzyme K3X25_11425 PF02938 GAD domain K3X25_11425 PF00152 tRNA synthetases class II (D, K and N) K3X25_11425 PF01336 OB-fold nucleic acid binding domain K3X25_11435 PF00072 Response regulator receiver domain K3X25_11435 PF00486 Transcriptional regulatory protein, C terminal K3X25_11460 PF00881 Nitroreductase family K3X25_11465 PF00850 Histone deacetylase domain K3X25_11470 PF02594 Uncharacterised ACR, YggU family COG1872 K3X25_11475 PF05656 Protein of unknown function (DUF805) K3X25_11480 PF02660 Glycerol-3-phosphate acyltransferase K3X25_11485 PF01979 Amidohydrolase family K3X25_11510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K3X25_11510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K3X25_11520 PF03167 Uracil DNA glycosylase superfamily K3X25_11525 PF00994 Probable molybdopterin binding domain K3X25_11535 PF00873 AcrB/AcrD/AcrF family K3X25_11545 PF01272 Transcription elongation factor, GreA/GreB, C-term K3X25_11545 PF03449 Transcription elongation factor, N-terminal K3X25_11565 PF08544 GHMP kinases C terminal K3X25_11570 PF00348 Polyprenyl synthetase K3X25_11595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_11595 PF03466 LysR substrate binding domain K3X25_11610 PF02803 Thiolase, C-terminal domain K3X25_11610 PF00108 Thiolase, N-terminal domain K3X25_11615 PF03707 Bacterial signalling protein N terminal repeat K3X25_11615 PF00563 EAL domain K3X25_11615 PF00990 Diguanylate cyclase, GGDEF domain K3X25_11620 PF03352 Methyladenine glycosylase K3X25_11625 PF13406 Transglycosylase SLT domain K3X25_11630 PF04116 Fatty acid hydroxylase superfamily K3X25_11640 PF08534 Redoxin K3X25_11645 PF14698 Argininosuccinate lyase C-terminal K3X25_11645 PF00206 Lyase K3X25_11650 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K3X25_11650 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K3X25_11660 PF02132 RecR protein K3X25_11660 PF13662 Toprim domain K3X25_11665 PF02575 YbaB/EbfC DNA-binding family K3X25_11670 PF12170 DNA polymerase III tau subunit V interacting with alpha K3X25_11670 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding K3X25_11670 PF12169 DNA polymerase III subunits gamma and tau domain III K3X25_11685 PF03193 RsgA GTPase K3X25_11695 PF02872 5'-nucleotidase, C-terminal domain K3X25_11695 PF00149 Calcineurin-like phosphoesterase K3X25_11700 PF00293 NUDIX domain K3X25_11700 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain K3X25_11700 PF09297 NADH pyrophosphatase zinc ribbon domain K3X25_11710 PF01842 ACT domain K3X25_11710 PF01817 Chorismate mutase type II K3X25_11710 PF00800 Prephenate dehydratase K3X25_11715 PF00034 Cytochrome c K3X25_11720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K3X25_11725 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_11730 PF12911 N-terminal TM domain of oligopeptide transport permease C K3X25_11730 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_11735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K3X25_11735 PF00005 ABC transporter K3X25_11740 PF07943 Penicillin-binding protein 5, C-terminal domain K3X25_11740 PF00768 D-alanyl-D-alanine carboxypeptidase K3X25_11745 PF02617 ATP-dependent Clp protease adaptor protein ClpS K3X25_11750 PF08468 Methyltransferase small domain N-terminal K3X25_11750 PF05175 Methyltransferase small domain K3X25_11760 PF01218 Coproporphyrinogen III oxidase K3X25_11770 PF01047 MarR family K3X25_11775 PF02803 Thiolase, C-terminal domain K3X25_11775 PF00108 Thiolase, N-terminal domain K3X25_11780 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain K3X25_11780 PF03900 Porphobilinogen deaminase, C-terminal domain K3X25_11785 PF01208 Uroporphyrinogen decarboxylase (URO-D) K3X25_11795 PF00270 DEAD/DEAH box helicase K3X25_11795 PF00271 Helicase conserved C-terminal domain K3X25_11800 PF02774 Semialdehyde dehydrogenase, dimerisation domain K3X25_11800 PF01118 Semialdehyde dehydrogenase, NAD binding domain K3X25_11815 PF00484 Carbonic anhydrase K3X25_11825 PF00883 Cytosol aminopeptidase family, catalytic domain K3X25_11825 PF02789 Cytosol aminopeptidase family, N-terminal domain K3X25_11830 PF00877 NlpC/P60 family K3X25_11840 PF03061 Thioesterase superfamily K3X25_11845 PF14535 AMP-binding enzyme C-terminal domain K3X25_11845 PF00501 AMP-binding enzyme K3X25_11855 PF01322 Cytochrome C' K3X25_11865 PF08240 Alcohol dehydrogenase GroES-like domain K3X25_11865 PF00107 Zinc-binding dehydrogenase K3X25_11880 PF03547 Membrane transport protein K3X25_11890 PF00756 Putative esterase K3X25_11895 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 K3X25_11905 PF01810 LysE type translocator K3X25_11910 PF00581 Rhodanese-like domain K3X25_11915 PF00155 Aminotransferase class I and II K3X25_11925 PF00909 Ammonium Transporter Family K3X25_11930 PF00543 Nitrogen regulatory protein P-II K3X25_11935 PF00905 Penicillin binding protein transpeptidase domain K3X25_11935 PF00912 Transglycosylase K3X25_11935 PF17092 Penicillin-binding protein OB-like domain K3X25_11955 PF00664 ABC transporter transmembrane region K3X25_11955 PF00005 ABC transporter K3X25_11960 PF00529 HlyD membrane-fusion protein of T1SS K3X25_11960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K3X25_11970 PF03009 Glycerophosphoryl diester phosphodiesterase family K3X25_11980 PF01329 Pterin 4 alpha carbinolamine dehydratase K3X25_11985 PF07992 Pyridine nucleotide-disulphide oxidoreductase K3X25_11985 PF14759 Reductase C-terminal K3X25_11995 PF00557 Metallopeptidase family M24 K3X25_12000 PF03749 Sugar fermentation stimulation protein RE domain K3X25_12000 PF17746 SfsA N-terminal OB domain K3X25_12005 PF00994 Probable molybdopterin binding domain K3X25_12005 PF18146 Damage-inducible protein CinA KH domain K3X25_12005 PF02464 Competence-damaged protein K3X25_12020 PF05736 OprF membrane domain K3X25_12020 PF00691 OmpA family K3X25_12025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_12025 PF03466 LysR substrate binding domain K3X25_12035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K3X25_12035 PF07992 Pyridine nucleotide-disulphide oxidoreductase K3X25_12060 PF02517 CPBP intramembrane metalloprotease K3X25_12065 PF01039 Carboxyl transferase domain K3X25_12065 PF17848 Acetyl-coA carboxylase zinc finger domain K3X25_12070 PF08245 Mur ligase middle domain K3X25_12070 PF02875 Mur ligase family, glutamate ligase domain K3X25_12080 PF00756 Putative esterase K3X25_12080 PF01476 LysM domain K3X25_12085 PF03969 AFG1-like ATPase K3X25_12095 PF01037 Lrp/AsnC ligand binding domain K3X25_12100 PF01262 Alanine dehydrogenase/PNT, C-terminal domain K3X25_12100 PF05222 Alanine dehydrogenase/PNT, N-terminal domain K3X25_12110 PF00924 Mechanosensitive ion channel K3X25_12110 PF05552 Conserved TM helix K3X25_12115 PF01741 Large-conductance mechanosensitive channel, MscL K3X25_12120 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ K3X25_12125 PF03483 B3/4 domain K3X25_12125 PF03484 tRNA synthetase B5 domain K3X25_12125 PF03147 Ferredoxin-fold anticodon binding domain K3X25_12125 PF01588 Putative tRNA binding domain K3X25_12125 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain K3X25_12140 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain K3X25_12140 PF01409 tRNA synthetases class II core domain (F) K3X25_12145 PF04542 Sigma-70 region 2 K3X25_12145 PF04545 Sigma-70, region 4 K3X25_12150 PF03795 YCII-related domain K3X25_12160 PF00453 Ribosomal protein L20 K3X25_12165 PF01632 Ribosomal protein L35 K3X25_12175 PF00224 Pyruvate kinase, barrel domain K3X25_12175 PF02887 Pyruvate kinase, alpha/beta domain K3X25_12200 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase K3X25_12205 PF01063 Amino-transferase class IV K3X25_12215 PF13378 Enolase C-terminal domain-like K3X25_12215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain K3X25_12230 PF03328 HpcH/HpaI aldolase/citrate lyase family K3X25_12245 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit K3X25_12265 PF00005 ABC transporter K3X25_12300 PF01794 Ferric reductase like transmembrane component K3X25_12310 PF00174 Oxidoreductase molybdopterin binding domain K3X25_12320 PF01966 HD domain K3X25_12320 PF13286 Phosphohydrolase-associated domain K3X25_12325 PF10431 C-terminal, D2-small domain, of ClpB protein K3X25_12325 PF02861 Clp amino terminal domain, pathogenicity island component K3X25_12325 PF17871 AAA lid domain K3X25_12325 PF00004 ATPase family associated with various cellular activities (AAA) K3X25_12325 PF07724 AAA domain (Cdc48 subfamily) K3X25_12335 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family K3X25_12350 PF01145 SPFH domain / Band 7 family K3X25_12355 PF00817 impB/mucB/samB family K3X25_12355 PF11799 impB/mucB/samB family C-terminal domain K3X25_12370 PF00444 Ribosomal protein L36 K3X25_12375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_12375 PF03466 LysR substrate binding domain K3X25_12385 PF00501 AMP-binding enzyme K3X25_12385 PF14535 AMP-binding enzyme C-terminal domain K3X25_12390 PF00005 ABC transporter K3X25_12405 PF02653 Branched-chain amino acid transport system / permease component K3X25_12410 PF00005 ABC transporter K3X25_12410 PF12399 Branched-chain amino acid ATP-binding cassette transporter K3X25_12415 PF00501 AMP-binding enzyme K3X25_12420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_12420 PF00512 His Kinase A (phospho-acceptor) domain K3X25_12425 PF00486 Transcriptional regulatory protein, C terminal K3X25_12425 PF00072 Response regulator receiver domain K3X25_12435 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K3X25_12435 PF01568 Molydopterin dinucleotide binding domain K3X25_12435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K3X25_12435 PF12838 4Fe-4S dicluster domain K3X25_12435 PF00384 Molybdopterin oxidoreductase K3X25_12470 PF02646 RmuC family K3X25_12475 PF01119 DNA mismatch repair protein, C-terminal domain K3X25_12475 PF08676 MutL C terminal dimerisation domain K3X25_12480 PF05193 Peptidase M16 inactive domain K3X25_12485 PF00675 Insulinase (Peptidase family M16) K3X25_12485 PF05193 Peptidase M16 inactive domain K3X25_12495 PF01252 Signal peptidase (SPase) II K3X25_12500 PF02142 MGS-like domain K3X25_12500 PF01808 AICARFT/IMPCHase bienzyme K3X25_12505 PF07940 Heparinase II/III-like protein K3X25_12510 PF01189 16S rRNA methyltransferase RsmB/F K3X25_12510 PF01029 NusB family K3X25_12520 PF05173 Dihydrodipicolinate reductase, C-terminus K3X25_12520 PF01113 Dihydrodipicolinate reductase, N-terminus K3X25_12525 PF02033 Ribosome-binding factor A K3X25_12530 PF16198 tRNA pseudouridylate synthase B C-terminal domain K3X25_12530 PF01509 TruB family pseudouridylate synthase (N terminal domain) K3X25_12535 PF02885 Glycosyl transferase family, helical bundle domain K3X25_12535 PF00591 Glycosyl transferase family, a/b domain K3X25_12535 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain K3X25_12555 PF00312 Ribosomal protein S15 K3X25_12565 PF00013 KH domain K3X25_12565 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain K3X25_12565 PF01138 3' exoribonuclease family, domain 1 K3X25_12565 PF03725 3' exoribonuclease family, domain 2 K3X25_12565 PF00575 S1 RNA binding domain K3X25_12585 PF01638 HxlR-like helix-turn-helix K3X25_12595 PF00230 Major intrinsic protein K3X25_12600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K3X25_12600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K3X25_12600 PF01842 ACT domain K3X25_12610 PF18429 Domain of unknown function (DUF5609) K3X25_12615 PF00885 6,7-dimethyl-8-ribityllumazine synthase K3X25_12620 PF01925 Sulfite exporter TauE/SafE K3X25_12635 PF04055 Radical SAM superfamily K3X25_12665 PF00291 Pyridoxal-phosphate dependent enzyme K3X25_12670 PF00132 Bacterial transferase hexapeptide (six repeats) K3X25_12670 PF14602 Hexapeptide repeat of succinyl-transferase K3X25_12670 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal K3X25_12690 PF13419 Haloacid dehalogenase-like hydrolase K3X25_12710 PF07687 Peptidase dimerisation domain K3X25_12710 PF01546 Peptidase family M20/M25/M40 K3X25_12715 PF17876 Cold shock domain K3X25_12715 PF08461 Ribonuclease R winged-helix domain K3X25_12715 PF08206 Ribonuclease B OB domain K3X25_12715 PF00773 RNB domain K3X25_12715 PF00575 S1 RNA binding domain K3X25_12720 PF13406 Transglycosylase SLT domain K3X25_12730 PF00834 Ribulose-phosphate 3 epimerase family K3X25_12740 PF00293 NUDIX domain K3X25_12745 PF03572 Peptidase family S41 K3X25_12745 PF13180 PDZ domain K3X25_12750 PF01551 Peptidase family M23 K3X25_12755 PF01676 Metalloenzyme superfamily K3X25_12755 PF06415 BPG-independent PGAM N-terminus (iPGM_N) K3X25_12765 PF02590 Predicted SPOUT methyltransferase K3X25_12780 PF12795 Mechanosensitive ion channel porin domain K3X25_12780 PF12794 Mechanosensitive ion channel inner membrane domain 1 K3X25_12780 PF00924 Mechanosensitive ion channel K3X25_12785 PF00330 Aconitase family (aconitate hydratase) K3X25_12790 PF00694 Aconitase C-terminal domain K3X25_12805 PF00180 Isocitrate/isopropylmalate dehydrogenase K3X25_12820 PF02770 Acyl-CoA dehydrogenase, middle domain K3X25_12820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K3X25_12820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K3X25_12825 PF03992 Antibiotic biosynthesis monooxygenase K3X25_12835 PF00860 Permease family K3X25_12840 PF01565 FAD binding domain K3X25_12840 PF09330 D-lactate dehydrogenase, membrane binding K3X25_12845 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K3X25_12850 PF03480 Bacterial extracellular solute-binding protein, family 7 K3X25_12855 PF00392 Bacterial regulatory proteins, gntR family K3X25_12855 PF07729 FCD domain K3X25_12870 PF02627 Carboxymuconolactone decarboxylase family K3X25_12875 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_12880 PF00005 ABC transporter K3X25_12885 PF00497 Bacterial extracellular solute-binding proteins, family 3 K3X25_12890 PF01321 Creatinase/Prolidase N-terminal domain K3X25_12890 PF00557 Metallopeptidase family M24 K3X25_12895 PF00005 ABC transporter K3X25_12895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K3X25_12900 PF00005 ABC transporter K3X25_12900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K3X25_12905 PF12911 N-terminal TM domain of oligopeptide transport permease C K3X25_12905 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_12910 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_12915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K3X25_12920 PF07729 FCD domain K3X25_12920 PF00392 Bacterial regulatory proteins, gntR family K3X25_12940 PF01557 Fumarylacetoacetate (FAA) hydrolase family K3X25_12945 PF06415 BPG-independent PGAM N-terminus (iPGM_N) K3X25_12945 PF01676 Metalloenzyme superfamily K3X25_12950 PF00005 ABC transporter K3X25_12950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K3X25_12955 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_12955 PF12911 N-terminal TM domain of oligopeptide transport permease C K3X25_12960 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_12965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K3X25_12970 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K3X25_12980 PF03480 Bacterial extracellular solute-binding protein, family 7 K3X25_12990 PF13533 Biotin-lipoyl like K3X25_12995 PF00873 AcrB/AcrD/AcrF family K3X25_13000 PF01758 Sodium Bile acid symporter family K3X25_13005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain K3X25_13005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain K3X25_13010 PF16901 C-terminal domain of alpha-glycerophosphate oxidase K3X25_13010 PF01266 FAD dependent oxidoreductase K3X25_13015 PF08220 DeoR-like helix-turn-helix domain K3X25_13015 PF00455 DeoR C terminal sensor domain K3X25_13020 PF13419 Haloacid dehalogenase-like hydrolase K3X25_13025 PF03707 Bacterial signalling protein N terminal repeat K3X25_13025 PF00990 Diguanylate cyclase, GGDEF domain K3X25_13025 PF00563 EAL domain K3X25_13030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K3X25_13035 PF03264 NapC/NirT cytochrome c family, N-terminal region K3X25_13045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K3X25_13050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K3X25_13060 PF17805 AsnC-like ligand binding domain K3X25_13060 PF13404 AsnC-type helix-turn-helix domain K3X25_13065 PF17805 AsnC-like ligand binding domain K3X25_13065 PF13404 AsnC-type helix-turn-helix domain K3X25_13070 PF17805 AsnC-like ligand binding domain K3X25_13070 PF13404 AsnC-type helix-turn-helix domain K3X25_13075 PF13186 Iron-sulfur cluster-binding domain K3X25_13075 PF04055 Radical SAM superfamily K3X25_13090 PF00072 Response regulator receiver domain K3X25_13090 PF00196 Bacterial regulatory proteins, luxR family K3X25_13100 PF00378 Enoyl-CoA hydratase/isomerase K3X25_13120 PF01312 FlhB HrpN YscU SpaS Family K3X25_13130 PF00771 FHIPEP family K3X25_13145 PF01618 MotA/TolQ/ExbB proton channel family K3X25_13165 PF08345 Flagellar M-ring protein C-terminal K3X25_13165 PF01514 Secretory protein of YscJ/FliF family K3X25_13175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K3X25_13180 PF00813 FliP family K3X25_13185 PF13378 Enolase C-terminal domain-like K3X25_13185 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain K3X25_13190 PF05199 GMC oxidoreductase K3X25_13190 PF00732 GMC oxidoreductase K3X25_13195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_13195 PF03466 LysR substrate binding domain K3X25_13200 PF13193 AMP-binding enzyme C-terminal domain K3X25_13200 PF00501 AMP-binding enzyme K3X25_13200 PF16177 Acetyl-coenzyme A synthetase N-terminus K3X25_13205 PF05191 Adenylate kinase, active site lid K3X25_13215 PF00474 Sodium:solute symporter family K3X25_13220 PF00571 CBS domain K3X25_13220 PF01743 Poly A polymerase head domain K3X25_13230 PF00929 Exonuclease K3X25_13235 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K3X25_13235 PF00384 Molybdopterin oxidoreductase K3X25_13235 PF01568 Molydopterin dinucleotide binding domain K3X25_13240 PF00155 Aminotransferase class I and II K3X25_13240 PF00392 Bacterial regulatory proteins, gntR family K3X25_13285 PF00892 EamA-like transporter family K3X25_13290 PF01571 Aminomethyltransferase folate-binding domain K3X25_13290 PF08669 Glycine cleavage T-protein C-terminal barrel domain K3X25_13290 PF16350 FAD dependent oxidoreductase central domain K3X25_13290 PF01266 FAD dependent oxidoreductase K3X25_13300 PF01266 FAD dependent oxidoreductase K3X25_13300 PF01571 Aminomethyltransferase folate-binding domain K3X25_13300 PF08669 Glycine cleavage T-protein C-terminal barrel domain K3X25_13300 PF16350 FAD dependent oxidoreductase central domain K3X25_13305 PF01810 LysE type translocator K3X25_13325 PF02803 Thiolase, C-terminal domain K3X25_13325 PF00108 Thiolase, N-terminal domain K3X25_13365 PF13491 4TM region of DNA translocase FtsK/SpoIIIE K3X25_13365 PF17854 FtsK alpha domain K3X25_13365 PF09397 Ftsk gamma domain K3X25_13365 PF01580 FtsK/SpoIIIE family K3X25_13385 PF01425 Amidase K3X25_13390 PF01494 FAD binding domain K3X25_13405 PF08803 Putative mono-oxygenase ydhR K3X25_13410 PF03966 Trm112p-like protein K3X25_13420 PF00085 Thioredoxin K3X25_13425 PF03372 Endonuclease/Exonuclease/phosphatase family K3X25_13435 PF00376 MerR family regulatory protein K3X25_13435 PF09278 MerR, DNA binding K3X25_13445 PF00583 Acetyltransferase (GNAT) family K3X25_13450 PF00072 Response regulator receiver domain K3X25_13450 PF00486 Transcriptional regulatory protein, C terminal K3X25_13455 PF00925 GTP cyclohydrolase II K3X25_13465 PF01168 Alanine racemase, N-terminal domain K3X25_13475 PF12100 Domain of unknown function (DUF3576) K3X25_13485 PF09334 tRNA synthetases class I (M) K3X25_13485 PF13603 Leucyl-tRNA synthetase, Domain 2 K3X25_13485 PF08264 Anticodon-binding domain of tRNA K3X25_13485 PF00133 tRNA synthetases class I (I, L, M and V) K3X25_13500 PF05430 S-adenosyl-L-methionine-dependent methyltransferase K3X25_13500 PF01266 FAD dependent oxidoreductase K3X25_13505 PF12794 Mechanosensitive ion channel inner membrane domain 1 K3X25_13505 PF00924 Mechanosensitive ion channel K3X25_13505 PF12795 Mechanosensitive ion channel porin domain K3X25_13510 PF00378 Enoyl-CoA hydratase/isomerase K3X25_13515 PF00106 short chain dehydrogenase K3X25_13520 PF01523 Putative modulator of DNA gyrase K3X25_13525 PF00459 Inositol monophosphatase family K3X25_13530 PF00356 Bacterial regulatory proteins, lacI family K3X25_13530 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K3X25_13540 PF13614 AAA domain K3X25_13540 PF02706 Chain length determinant protein K3X25_13540 PF13807 G-rich domain on putative tyrosine kinase K3X25_13550 PF10531 SLBB domain K3X25_13550 PF18412 Outer-membrane lipoprotein Wza C-terminal domain K3X25_13550 PF02563 Polysaccharide biosynthesis/export protein K3X25_13560 PF01370 NAD dependent epimerase/dehydratase family K3X25_13565 PF00534 Glycosyl transferases group 1 K3X25_13565 PF13579 Glycosyl transferase 4-like domain K3X25_13570 PF16363 GDP-mannose 4,6 dehydratase K3X25_13575 PF00534 Glycosyl transferases group 1 K3X25_13575 PF13439 Glycosyltransferase Family 4 K3X25_13600 PF13439 Glycosyltransferase Family 4 K3X25_13600 PF00534 Glycosyl transferases group 1 K3X25_13625 PF00149 Calcineurin-like phosphoesterase K3X25_13630 PF06082 Exopolysaccharide biosynthesis protein YbjH K3X25_13640 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain K3X25_13640 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain K3X25_13645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K3X25_13645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K3X25_13645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K3X25_13645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K3X25_13650 PF00483 Nucleotidyl transferase K3X25_13650 PF01050 Mannose-6-phosphate isomerase K3X25_13670 PF01351 Ribonuclease HII K3X25_13675 PF01555 DNA methylase K3X25_13675 PF18755 Restriction Enzyme Adenine Methylase Associated K3X25_13680 PF00487 Fatty acid desaturase K3X25_13685 PF02397 Bacterial sugar transferase K3X25_13690 PF00730 HhH-GPD superfamily base excision DNA repair protein K3X25_13690 PF14815 NUDIX domain K3X25_13700 PF13462 Thioredoxin K3X25_13705 PF03734 L,D-transpeptidase catalytic domain K3X25_13710 PF05958 tRNA (Uracil-5-)-methyltransferase K3X25_13715 PF12627 Probable RNA and SrmB- binding site of polymerase A K3X25_13715 PF01743 Poly A polymerase head domain K3X25_13715 PF13735 tRNA nucleotidyltransferase domain 2 putative K3X25_13720 PF00293 NUDIX domain K3X25_13725 PF01430 Hsp33 protein K3X25_13730 PF00486 Transcriptional regulatory protein, C terminal K3X25_13730 PF00072 Response regulator receiver domain K3X25_13740 PF00291 Pyridoxal-phosphate dependent enzyme K3X25_13740 PF00585 C-terminal regulatory domain of Threonine dehydratase K3X25_13750 PF00764 Arginosuccinate synthase K3X25_13765 PF00294 pfkB family carbohydrate kinase K3X25_13770 PF00180 Isocitrate/isopropylmalate dehydrogenase K3X25_13775 PF03971 Monomeric isocitrate dehydrogenase K3X25_13785 PF13409 Glutathione S-transferase, N-terminal domain K3X25_13790 PF03949 Malic enzyme, NAD binding domain K3X25_13790 PF00390 Malic enzyme, N-terminal domain K3X25_13790 PF01515 Phosphate acetyl/butaryl transferase K3X25_13795 PF16363 GDP-mannose 4,6 dehydratase K3X25_13800 PF01624 MutS domain I K3X25_13800 PF05192 MutS domain III K3X25_13800 PF05190 MutS family domain IV K3X25_13800 PF00488 MutS domain V K3X25_13800 PF05188 MutS domain II K3X25_13805 PF04536 TPM domain K3X25_13810 PF01025 GrpE K3X25_13815 PF01628 HrcA protein C terminal domain K3X25_13820 PF03725 3' exoribonuclease family, domain 2 K3X25_13820 PF01138 3' exoribonuclease family, domain 1 K3X25_13825 PF01725 Ham1 family K3X25_13830 PF06969 HemN C-terminal domain K3X25_13830 PF04055 Radical SAM superfamily K3X25_13835 PF17762 HTH domain found in ParB protein K3X25_13835 PF02195 ParB-like nuclease domain K3X25_13840 PF13614 AAA domain K3X25_13845 PF02527 rRNA small subunit methyltransferase G K3X25_13850 PF01134 Glucose inhibited division protein A K3X25_13850 PF13932 GidA associated domain K3X25_13855 PF01926 50S ribosome-binding GTPase K3X25_13855 PF12631 MnmE helical domain K3X25_13855 PF10396 GTP-binding protein TrmE N-terminus K3X25_13860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K3X25_13860 PF07498 Rho termination factor, N-terminal domain K3X25_13860 PF07497 Rho termination factor, RNA-binding domain K3X25_13865 PF03653 Uncharacterised protein family (UPF0093) K3X25_13870 PF02545 Maf-like protein K3X25_13875 PF18317 Shikimate 5'-dehydrogenase C-terminal domain K3X25_13875 PF01488 Shikimate / quinate 5-dehydrogenase K3X25_13875 PF08501 Shikimate dehydrogenase substrate binding domain K3X25_13880 PF01121 Dephospho-CoA kinase K3X25_13885 PF00929 Exonuclease K3X25_13890 PF02556 Preprotein translocase subunit SecB K3X25_13895 PF00293 NUDIX domain K3X25_13900 PF04186 FxsA cytoplasmic membrane protein K3X25_13925 PF00004 ATPase family associated with various cellular activities (AAA) K3X25_13925 PF07724 AAA domain (Cdc48 subfamily) K3X25_13930 PF00227 Proteasome subunit K3X25_13935 PF00762 Ferrochelatase K3X25_13945 PF00156 Phosphoribosyl transferase domain K3X25_13950 PF00462 Glutaredoxin K3X25_13955 PF00795 Carbon-nitrogen hydrolase K3X25_13975 PF00561 alpha/beta hydrolase fold K3X25_13985 PF05175 Methyltransferase small domain K3X25_13985 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus K3X25_13990 PF02576 RimP N-terminal domain K3X25_13990 PF17384 RimP C-terminal SH3 domain K3X25_13995 PF13184 NusA-like KH domain K3X25_13995 PF08529 NusA N-terminal domain K3X25_13995 PF00575 S1 RNA binding domain K3X25_14005 PF00009 Elongation factor Tu GTP binding domain K3X25_14005 PF11987 Translation-initiation factor 2 K3X25_14005 PF08364 Bacterial translation initiation factor IF-2 associated region K3X25_14005 PF04760 Translation initiation factor IF-2, N-terminal region K3X25_14015 PF00293 NUDIX domain K3X25_14020 PF01960 ArgJ family K3X25_14025 PF05698 Bacterial trigger factor protein (TF) C-terminus K3X25_14030 PF02810 SEC-C motif K3X25_14030 PF07517 SecA DEAD-like domain K3X25_14030 PF01043 SecA preprotein cross-linking domain K3X25_14030 PF07516 SecA Wing and Scaffold domain K3X25_14040 PF12849 PBP superfamily domain K3X25_14045 PF04002 RadC-like JAB domain K3X25_14050 PF00226 DnaJ domain K3X25_14050 PF01556 DnaJ C terminal domain K3X25_14050 PF00684 DnaJ central domain K3X25_14055 PF00012 Hsp70 protein K3X25_14060 PF13532 2OG-Fe(II) oxygenase superfamily K3X25_14075 PF00459 Inositol monophosphatase family K3X25_14080 PF02348 Cytidylyltransferase K3X25_14085 PF00483 Nucleotidyl transferase K3X25_14110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K3X25_14115 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein K3X25_14115 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus K3X25_14120 PF00005 ABC transporter K3X25_14140 PF01612 3'-5' exonuclease K3X25_14140 PF00476 DNA polymerase family A K3X25_14150 PF13247 4Fe-4S dicluster domain K3X25_14150 PF12800 4Fe-4S binding domain K3X25_14155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K3X25_14155 PF00384 Molybdopterin oxidoreductase K3X25_14155 PF01568 Molydopterin dinucleotide binding domain K3X25_14160 PF07859 alpha/beta hydrolase fold K3X25_14170 PF02606 Tetraacyldisaccharide-1-P 4'-kinase K3X25_14180 PF03734 L,D-transpeptidase catalytic domain K3X25_14185 PF00034 Cytochrome c K3X25_14190 PF00115 Cytochrome C and Quinol oxidase polypeptide I K3X25_14195 PF07728 AAA domain (dynein-related subfamily) K3X25_14195 PF08406 CbbQ/NirQ/NorQ C-terminal K3X25_14200 PF00092 von Willebrand factor type A domain K3X25_14205 PF00510 Cytochrome c oxidase subunit III K3X25_14215 PF00027 Cyclic nucleotide-binding domain K3X25_14215 PF13545 Crp-like helix-turn-helix domain K3X25_14230 PF01209 ubiE/COQ5 methyltransferase family K3X25_14245 PF13473 Cupredoxin-like domain K3X25_14245 PF18764 Nitrous oxide reductase propeller repeat K3X25_14245 PF18793 Nitrous oxide reductase propeller repeat 2 K3X25_14270 PF12838 4Fe-4S dicluster domain K3X25_14270 PF12800 4Fe-4S binding domain K3X25_14275 PF13237 4Fe-4S dicluster domain K3X25_14275 PF12801 4Fe-4S binding domain K3X25_14280 PF00005 ABC transporter K3X25_14300 PF02630 SCO1/SenC K3X25_14310 PF00085 Thioredoxin K3X25_14315 PF00580 UvrD/REP helicase N-terminal domain K3X25_14315 PF13361 UvrD-like helicase C-terminal domain K3X25_14315 PF12705 PD-(D/E)XK nuclease superfamily K3X25_14325 PF12804 MobA-like NTP transferase domain K3X25_14330 PF01636 Phosphotransferase enzyme family K3X25_14335 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE K3X25_14345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_14345 PF00512 His Kinase A (phospho-acceptor) domain K3X25_14350 PF02630 SCO1/SenC K3X25_14355 PF02954 Bacterial regulatory protein, Fis family K3X25_14355 PF00072 Response regulator receiver domain K3X25_14375 PF01966 HD domain K3X25_14385 PF01501 Glycosyl transferase family 8 K3X25_14385 PF00535 Glycosyl transferase family 2 K3X25_14395 PF05221 S-adenosyl-L-homocysteine hydrolase K3X25_14395 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K3X25_14400 PF00291 Pyridoxal-phosphate dependent enzyme K3X25_14405 PF04972 BON domain K3X25_14405 PF01476 LysM domain K3X25_14415 PF04199 Putative cyclase K3X25_14435 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus K3X25_14435 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K3X25_14440 PF00814 Glycoprotease family K3X25_14460 PF17831 Pyruvate dehydrogenase E1 component middle domain K3X25_14460 PF00456 Transketolase, thiamine diphosphate binding domain K3X25_14465 PF01037 Lrp/AsnC ligand binding domain K3X25_14470 PF01053 Cys/Met metabolism PLP-dependent enzyme K3X25_14475 PF01037 Lrp/AsnC ligand binding domain K3X25_14520 PF00202 Aminotransferase class-III K3X25_14530 PF00512 His Kinase A (phospho-acceptor) domain K3X25_14530 PF08448 PAS fold K3X25_14530 PF13426 PAS domain K3X25_14530 PF00072 Response regulator receiver domain K3X25_14530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_14540 PF06253 Trimethylamine methyltransferase (MTTB) K3X25_14545 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K3X25_14550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K3X25_14555 PF00920 Dehydratase family K3X25_14560 PF01966 HD domain K3X25_14565 PF06155 Protein of unknown function (DUF971) K3X25_14565 PF02668 Taurine catabolism dioxygenase TauD, TfdA family K3X25_14570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_14570 PF03466 LysR substrate binding domain K3X25_14575 PF00378 Enoyl-CoA hydratase/isomerase K3X25_14580 PF00561 alpha/beta hydrolase fold K3X25_14585 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K3X25_14590 PF00392 Bacterial regulatory proteins, gntR family K3X25_14590 PF07702 UTRA domain K3X25_14600 PF01979 Amidohydrolase family K3X25_14605 PF00221 Aromatic amino acid lyase K3X25_14615 PF01175 Urocanase Rossmann-like domain K3X25_14615 PF17392 Urocanase C-terminal domain K3X25_14615 PF17391 Urocanase N-terminal domain K3X25_14620 PF03480 Bacterial extracellular solute-binding protein, family 7 K3X25_14630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K3X25_14645 PF01678 Diaminopimelate epimerase K3X25_14650 PF04055 Radical SAM superfamily K3X25_14650 PF00919 Uncharacterized protein family UPF0004 K3X25_14655 PF04299 Putative FMN-binding domain K3X25_14680 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal K3X25_14680 PF00355 Rieske [2Fe-2S] domain K3X25_14685 PF00033 Cytochrome b/b6/petB K3X25_14685 PF00032 Cytochrome b(C-terminal)/b6/petD K3X25_14690 PF02167 Cytochrome C1 family K3X25_14700 PF00005 ABC transporter K3X25_14705 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_14720 PF00892 EamA-like transporter family K3X25_14725 PF01264 Chorismate synthase K3X25_14730 PF01966 HD domain K3X25_14745 PF00216 Bacterial DNA-binding protein K3X25_14750 PF01048 Phosphorylase superfamily K3X25_14750 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus K3X25_14755 PF13382 Adenine deaminase C-terminal domain K3X25_14755 PF01979 Amidohydrolase family K3X25_14760 PF12833 Helix-turn-helix domain K3X25_14760 PF01965 DJ-1/PfpI family K3X25_14765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K3X25_14765 PF02770 Acyl-CoA dehydrogenase, middle domain K3X25_14765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K3X25_14780 PF00378 Enoyl-CoA hydratase/isomerase K3X25_14790 PF13292 1-deoxy-D-xylulose-5-phosphate synthase K3X25_14790 PF02779 Transketolase, pyrimidine binding domain K3X25_14790 PF02780 Transketolase, C-terminal domain K3X25_14795 PF00348 Polyprenyl synthetase K3X25_14800 PF02609 Exonuclease VII small subunit K3X25_14805 PF00850 Histone deacetylase domain K3X25_14815 PF00072 Response regulator receiver domain K3X25_14815 PF00486 Transcriptional regulatory protein, C terminal K3X25_14820 PF12802 MarR family K3X25_14825 PF01063 Amino-transferase class IV K3X25_14840 PF03150 Di-haem cytochrome c peroxidase K3X25_14840 PF00034 Cytochrome c K3X25_14845 PF08331 Domain of unknown function (DUF1730) K3X25_14850 PF00043 Glutathione S-transferase, C-terminal domain K3X25_14850 PF13417 Glutathione S-transferase, N-terminal domain K3X25_14855 PF00912 Transglycosylase K3X25_14865 PF00310 Glutamine amidotransferases class-II K3X25_14865 PF04898 Glutamate synthase central domain K3X25_14865 PF01645 Conserved region in glutamate synthase K3X25_14865 PF01493 GXGXG motif K3X25_14870 PF07992 Pyridine nucleotide-disulphide oxidoreductase K3X25_14870 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K3X25_14875 PF02673 Bacitracin resistance protein BacA K3X25_14890 PF00849 RNA pseudouridylate synthase K3X25_14895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K3X25_14895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K3X25_14910 PF00171 Aldehyde dehydrogenase family K3X25_14920 PF01494 FAD binding domain K3X25_14925 PF00753 Metallo-beta-lactamase superfamily K3X25_14930 PF10755 Protein of unknown function (DUF2585) K3X25_14935 PF01557 Fumarylacetoacetate (FAA) hydrolase family K3X25_14940 PF14497 Glutathione S-transferase, C-terminal domain K3X25_14940 PF02798 Glutathione S-transferase, N-terminal domain K3X25_14945 PF04209 homogentisate 1,2-dioxygenase K3X25_14950 PF00691 OmpA family K3X25_14950 PF13677 Membrane MotB of proton-channel complex MotA/MotB K3X25_14955 PF00460 Flagella basal body rod protein K3X25_14955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K3X25_14970 PF02119 Flagellar P-ring protein K3X25_14980 PF02107 Flagellar L-ring protein K3X25_14990 PF00460 Flagella basal body rod protein K3X25_14990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K3X25_14995 PF00460 Flagella basal body rod protein K3X25_14995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K3X25_15000 PF01313 Bacterial export proteins, family 3 K3X25_15005 PF02049 Flagellar hook-basal body complex protein FliE K3X25_15010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K3X25_15010 PF00460 Flagella basal body rod protein K3X25_15015 PF00460 Flagella basal body rod protein K3X25_15020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K3X25_15020 PF02874 ATP synthase alpha/beta family, beta-barrel domain K3X25_15020 PF18269 T3SS EscN ATPase C-terminal domain K3X25_15030 PF07378 Flagellar protein FlbT K3X25_15040 PF00700 Bacterial flagellin C-terminal helical region K3X25_15040 PF00669 Bacterial flagellin N-terminal helical region K3X25_15060 PF03963 Flagellar hook capping protein - N-terminal region K3X25_15065 PF03109 ABC1 family K3X25_15070 PF01209 ubiE/COQ5 methyltransferase family K3X25_15080 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain K3X25_15080 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain K3X25_15080 PF06827 Zinc finger found in FPG and IleRS K3X25_15085 PF00378 Enoyl-CoA hydratase/isomerase K3X25_15090 PF01649 Ribosomal protein S20 K3X25_15095 PF01593 Flavin containing amine oxidoreductase K3X25_15105 PF01810 LysE type translocator K3X25_15110 PF02441 Flavoprotein K3X25_15115 PF00072 Response regulator receiver domain K3X25_15115 PF00486 Transcriptional regulatory protein, C terminal K3X25_15125 PF00005 ABC transporter K3X25_15135 PF17131 Outer membrane lipoprotein-sorting protein K3X25_15145 PF00072 Response regulator receiver domain K3X25_15145 PF00486 Transcriptional regulatory protein, C terminal K3X25_15150 PF00512 His Kinase A (phospho-acceptor) domain K3X25_15150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_15150 PF00497 Bacterial extracellular solute-binding proteins, family 3 K3X25_15160 PF06339 Ectoine synthase K3X25_15170 PF02801 Beta-ketoacyl synthase, C-terminal domain K3X25_15170 PF00109 Beta-ketoacyl synthase, N-terminal domain K3X25_15175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K3X25_15175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K3X25_15175 PF02770 Acyl-CoA dehydrogenase, middle domain K3X25_15180 PF13193 AMP-binding enzyme C-terminal domain K3X25_15180 PF00501 AMP-binding enzyme K3X25_15185 PF00550 Phosphopantetheine attachment site K3X25_15190 PF02885 Glycosyl transferase family, helical bundle domain K3X25_15190 PF00591 Glycosyl transferase family, a/b domain K3X25_15195 PF00218 Indole-3-glycerol phosphate synthase K3X25_15235 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K3X25_15255 PF08402 TOBE domain K3X25_15255 PF00005 ABC transporter K3X25_15260 PF17912 MalK OB fold domain K3X25_15260 PF03459 TOBE domain K3X25_15260 PF00005 ABC transporter K3X25_15265 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_15270 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_15300 PF00582 Universal stress protein family K3X25_15310 PF16868 NMT1-like family K3X25_15315 PF08448 PAS fold K3X25_15315 PF00512 His Kinase A (phospho-acceptor) domain K3X25_15315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K3X25_15315 PF00072 Response regulator receiver domain K3X25_15315 PF13426 PAS domain K3X25_15320 PF00196 Bacterial regulatory proteins, luxR family K3X25_15320 PF00072 Response regulator receiver domain K3X25_15325 PF00171 Aldehyde dehydrogenase family K3X25_15330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K3X25_15330 PF02770 Acyl-CoA dehydrogenase, middle domain K3X25_15330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K3X25_15335 PF00202 Aminotransferase class-III K3X25_15340 PF09856 Predicted transcriptional regulator (DUF2083) K3X25_15340 PF06114 IrrE N-terminal-like domain K3X25_15340 PF01381 Helix-turn-helix K3X25_15345 PF01266 FAD dependent oxidoreductase K3X25_15350 PF01266 FAD dependent oxidoreductase K3X25_15355 PF03951 Glutamine synthetase, beta-Grasp domain K3X25_15355 PF00120 Glutamine synthetase, catalytic domain K3X25_15360 PF00392 Bacterial regulatory proteins, gntR family K3X25_15360 PF07729 FCD domain K3X25_15365 PF00005 ABC transporter K3X25_15380 PF01891 Cobalt uptake substrate-specific transmembrane region K3X25_15390 PF01066 CDP-alcohol phosphatidyltransferase K3X25_15395 PF02666 Phosphatidylserine decarboxylase K3X25_15405 PF01979 Amidohydrolase family K3X25_15415 PF06434 Aconitate hydratase 2 N-terminus K3X25_15415 PF11791 Aconitate B N-terminal domain K3X25_15415 PF00330 Aconitase family (aconitate hydratase) K3X25_15420 PF01037 Lrp/AsnC ligand binding domain K3X25_15425 PF00171 Aldehyde dehydrogenase family K3X25_15425 PF01619 Proline dehydrogenase K3X25_15425 PF18327 Proline utilization A proline dehydrogenase N-terminal domain K3X25_15425 PF14850 DNA-binding domain of Proline dehydrogenase K3X25_15430 PF05378 Hydantoinase/oxoprolinase N-terminal region K3X25_15430 PF01968 Hydantoinase/oxoprolinase K3X25_15435 PF06968 Biotin and Thiamin Synthesis associated domain K3X25_15435 PF04055 Radical SAM superfamily K3X25_15440 PF00155 Aminotransferase class I and II K3X25_15450 PF04055 Radical SAM superfamily K3X25_15450 PF00202 Aminotransferase class-III K3X25_15450 PF06968 Biotin and Thiamin Synthesis associated domain K3X25_15460 PF08241 Methyltransferase domain K3X25_15465 PF01037 Lrp/AsnC ligand binding domain K3X25_15470 PF07687 Peptidase dimerisation domain K3X25_15470 PF01546 Peptidase family M20/M25/M40 K3X25_15475 PF00291 Pyridoxal-phosphate dependent enzyme K3X25_15480 PF01321 Creatinase/Prolidase N-terminal domain K3X25_15480 PF00557 Metallopeptidase family M24 K3X25_15495 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K3X25_15495 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K3X25_15500 PF00576 HIUase/Transthyretin family K3X25_15505 PF02632 BioY family K3X25_15510 PF02361 Cobalt transport protein K3X25_15515 PF00005 ABC transporter K3X25_15520 PF00005 ABC transporter K3X25_15525 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_15530 PF13416 Bacterial extracellular solute-binding protein K3X25_15545 PF13614 AAA domain K3X25_15545 PF00376 MerR family regulatory protein K3X25_15555 PF12833 Helix-turn-helix domain K3X25_15555 PF01965 DJ-1/PfpI family K3X25_15560 PF02347 Glycine cleavage system P-protein K3X25_15565 PF01597 Glycine cleavage H-protein K3X25_15570 PF08669 Glycine cleavage T-protein C-terminal barrel domain K3X25_15570 PF01571 Aminomethyltransferase folate-binding domain K3X25_15580 PF01235 Sodium:alanine symporter family K3X25_15590 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_15595 PF00005 ABC transporter K3X25_15600 PF12849 PBP superfamily domain K3X25_15610 PF00528 Binding-protein-dependent transport system inner membrane component K3X25_15615 PF00005 ABC transporter K3X25_15615 PF03459 TOBE domain K3X25_15620 PF16347 Domain of unknown function (DUF4976) K3X25_15620 PF00884 Sulfatase K3X25_15630 PF00005 ABC transporter K3X25_15630 PF08402 TOBE domain K3X25_15650 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K3X25_15650 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K3X25_15660 PF17674 HHH domain K3X25_15660 PF00575 S1 RNA binding domain K3X25_15660 PF09371 Tex-like protein N-terminal domain K3X25_15660 PF16921 Tex protein YqgF-like domain K3X25_15670 PF00491 Arginase family K3X25_15680 PF02423 Ornithine cyclodeaminase/mu-crystallin family K3X25_15685 PF01103 Surface antigen K3X25_15685 PF07244 Surface antigen variable number repeat K3X25_15685 PF17243 POTRA domain TamA domain 1 K3X25_15695 PF00141 Peroxidase K3X25_15700 PF03466 LysR substrate binding domain K3X25_15700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K3X25_15705 PF02502 Ribose/Galactose Isomerase K3X25_15715 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family K3X25_15720 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) K3X25_15720 PF00413 Matrixin K3X25_15720 PF08548 Peptidase M10 serralysin C terminal K3X25_15730 PF00535 Glycosyl transferase family 2 K3X25_15750 PF00483 Nucleotidyl transferase K3X25_15755 PF04321 RmlD substrate binding domain K3X25_15760 PF16363 GDP-mannose 4,6 dehydratase K3X25_15765 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase K3X25_15770 PF00535 Glycosyl transferase family 2 K3X25_15780 PF00005 ABC transporter K3X25_15835 PF02796 Helix-turn-helix domain of resolvase K3X25_15835 PF00239 Resolvase, N terminal domain K3X25_15860 PF01168 Alanine racemase, N-terminal domain K3X25_15880 PF08334 Type II secretion system (T2SS), protein G K3X25_15880 PF07963 Prokaryotic N-terminal methylation motif K3X25_15885 PF07963 Prokaryotic N-terminal methylation motif K3X25_15885 PF00114 Pilin (bacterial filament) K3X25_15895 PF00263 Bacterial type II and III secretion system protein K3X25_15895 PF03958 Bacterial type II/III secretion system short domain K3X25_15920 PF00437 Type II/IV secretion system protein K3X25_15920 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain K3X25_15925 PF00482 Type II secretion system (T2SS), protein F K3X25_15930 PF06750 Bacterial Peptidase A24 N-terminal domain K3X25_15930 PF01478 Type IV leader peptidase family K3X25_15935 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K3X25_15955 PF00290 Tryptophan synthase alpha chain K3X25_15960 PF03756 A-factor biosynthesis hotdog domain