VSAL_I0006 SM00382 ATPases associated with a variety of cellular activities VSAL_I0008 SM00062 Bacterial periplasmic substrate-binding proteins VSAL_I0009 SM00382 ATPases associated with a variety of cellular activities VSAL_I0009 SM00760 Bacterial dnaA protein helix-turn-helix domain VSAL_I0010 SM00480 DNA polymerase III beta subunit VSAL_I0012 SM00387 Histidine kinase-like ATPases VSAL_I0012 SM00433 TopoisomeraseII VSAL_I0018 SM00883 Chaperonin 10 Kd subunit VSAL_I0024 SM01118 VSAL_I0024 VSAL_I0031 SM00257 Lysin motif VSAL_I0042 SM00382 ATPases associated with a variety of cellular activities VSAL_I0043 SM00563 Phosphate acyltransferases VSAL_I0051 SM00357 Cold shock protein domain VSAL_I0059 SM00470 ParB-like nuclease domain VSAL_I0076 SM00257 Lysin motif VSAL_I0081 SM01001 AIR carboxylase VSAL_I0099 SM00479 VSAL_I0099 VSAL_I0100 SM00100 Cyclic nucleotide-monophosphate binding domain VSAL_I0100 SM00116 Domain in cystathionine beta-synthase and other proteins. VSAL_I0118 SM00220 Serine/Threonine protein kinases, catalytic domain VSAL_I0124 SM01219 VSAL_I0124 VSAL_I0141 SM00382 ATPases associated with a variety of cellular activities VSAL_I0146 SM00487 DEAD-like helicases superfamily VSAL_I0146 SM00490 helicase superfamily c-terminal domain VSAL_I0148 SM00357 Cold shock protein domain VSAL_I0148 SM00382 ATPases associated with a variety of cellular activities VSAL_I0148 SM00959 Rho termination factor, N-terminal domain VSAL_I0158 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain VSAL_I0158 SM01232 VSAL_I0158 VSAL_I0167 SM00116 Domain in cystathionine beta-synthase and other proteins. VSAL_I0188 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain VSAL_I0188 SM01232 VSAL_I0188 VSAL_I0197 SM00316 Ribosomal protein S1-like RNA-binding domain VSAL_I0197 SM00732 Likely ribonuclease with RNase H fold. VSAL_I0203 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_I0203 SM00387 Histidine kinase-like ATPases VSAL_I0203 SM00388 His Kinase A (phosphoacceptor) domain VSAL_I0204 SM00448 cheY-homologous receiver domain VSAL_I0204 SM00862 Transcriptional regulatory protein, C terminal VSAL_I0210 SM00072 Guanylate kinase homologues. VSAL_I0211 SM01409 VSAL_I0211 VSAL_I0212 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSAL_I0212 SM00954 Region found in RelA / SpoT proteins VSAL_I0224 SM00341 Helicase and RNase D C-terminal VSAL_I0224 SM00487 DEAD-like helicases superfamily VSAL_I0224 SM00490 helicase superfamily c-terminal domain VSAL_I0224 SM00956 VSAL_I0224 VSAL_I0227 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VSAL_I0227 SM00474 3'-5' exonuclease VSAL_I0227 SM00475 5'-3' exonuclease VSAL_I0227 SM00482 DNA polymerase A domain VSAL_I0233 SM00729 Elongator protein 3, MiaB family, Radical SAM VSAL_I0256 SM00116 Domain in cystathionine beta-synthase and other proteins. VSAL_I0265 SM00849 Metallo-beta-lactamase superfamily VSAL_I0265 SM01027 Beta-Casp domain VSAL_I0298 SM00382 ATPases associated with a variety of cellular activities VSAL_I0304 SM00320 WD40 repeats VSAL_I0312 SM00838 Elongation factor G C-terminus VSAL_I0312 SM00889 Elongation factor G, domain IV VSAL_I0319 SM01403 VSAL_I0319 VSAL_I0323 SM01382 VSAL_I0323 VSAL_I0323 SM01383 VSAL_I0323 VSAL_I0326 SM00322 K homology RNA-binding domain VSAL_I0330 SM01374 VSAL_I0330 VSAL_I0331 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VSAL_I0343 SM00363 S4 RNA-binding domain VSAL_I0343 SM01390 VSAL_I0343 VSAL_I0344 SM00662 RNA polymerases D VSAL_I0351 SM00382 ATPases associated with a variety of cellular activities VSAL_I0352 SM00487 DEAD-like helicases superfamily VSAL_I0352 SM00490 helicase superfamily c-terminal domain VSAL_I0368 SM00650 Ribosomal RNA adenine dimethylases VSAL_I0372 SM00271 DnaJ molecular chaperone homology domain VSAL_I0376 SM01329 VSAL_I0376 VSAL_I0377 SM00917 LeuA allosteric (dimerisation) domain VSAL_I0382 SM00382 ATPases associated with a variety of cellular activities VSAL_I0383 SM01005 Alanine racemase, C-terminal domain VSAL_I0391 SM00506 Appr-1"-p processing enzyme VSAL_I0411 SM00563 Phosphate acyltransferases VSAL_I0427 SM00382 ATPases associated with a variety of cellular activities VSAL_I0442 SM01018 B12 binding domain VSAL_I0465 SM00052 Putative diguanylate phosphodiesterase VSAL_I0465 SM00267 diguanylate cyclase VSAL_I0469 SM00965 Secretin and TonB N terminus short domain VSAL_I0487 SM00316 Ribosomal protein S1-like RNA-binding domain VSAL_I0493 SM00924 MgtE intracellular N domain VSAL_I0499 SM00382 ATPases associated with a variety of cellular activities VSAL_I0503 SM00116 Domain in cystathionine beta-synthase and other proteins. VSAL_I0505 SM00382 ATPases associated with a variety of cellular activities VSAL_I0512 SM00563 Phosphate acyltransferases VSAL_I0534 SM00478 endonuclease III VSAL_I0534 SM00525 VSAL_I0534 VSAL_I0537 SM00729 Elongator protein 3, MiaB family, Radical SAM VSAL_I0540 SM01152 VSAL_I0540 VSAL_I0544 SM00382 ATPases associated with a variety of cellular activities VSAL_I0546 SM00732 Likely ribonuclease with RNase H fold. VSAL_I0551 SM00731 SprT homologues. VSAL_I0554 SM00861 Transketolase, pyrimidine binding domain VSAL_I0555 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VSAL_I0558 SM00487 DEAD-like helicases superfamily VSAL_I0558 SM00490 helicase superfamily c-terminal domain VSAL_I0567 SM00382 ATPases associated with a variety of cellular activities VSAL_I0568 SM00927 DNA mismatch repair enzyme MutH VSAL_I0570 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VSAL_I0576 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VSAL_I0579 SM00904 Riboflavin kinase VSAL_I0585 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain VSAL_I0586 SM00851 MGS-like domain VSAL_I0586 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VSAL_I0590 SM01103 VSAL_I0590 VSAL_I0592 SM00382 ATPases associated with a variety of cellular activities VSAL_I0597 SM00316 Ribosomal protein S1-like RNA-binding domain VSAL_I0601 SM01387 VSAL_I0601 VSAL_I0602 SM00316 Ribosomal protein S1-like RNA-binding domain VSAL_I0602 SM00322 K homology RNA-binding domain VSAL_I0603 SM00028 Tetratricopeptide repeats VSAL_I0606 SM00052 Putative diguanylate phosphodiesterase VSAL_I0606 SM00091 PAS domain VSAL_I0606 SM00267 diguanylate cyclase VSAL_I0619 SM01133 VSAL_I0619 VSAL_I0620 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain VSAL_I0626 SM00382 ATPases associated with a variety of cellular activities VSAL_I0627 SM00838 Elongation factor G C-terminus VSAL_I0627 SM00889 Elongation factor G, domain IV VSAL_I0632 SM00533 DNA-binding domain of DNA mismatch repair MUTS family VSAL_I0632 SM00534 ATPase domain of DNA mismatch repair MUTS family VSAL_I0634 SM00382 ATPases associated with a variety of cellular activities VSAL_I0635 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VSAL_I0646 SM01091 Transporter associated domain VSAL_I0648 SM00382 ATPases associated with a variety of cellular activities VSAL_I0648 SM00962 SRP54-type protein, GTPase domain VSAL_I0648 SM00963 SRP54-type protein, helical bundle domain VSAL_I0654 SM00830 Chorismate mutase type II VSAL_I0661 SM00830 Chorismate mutase type II VSAL_I0664 SM00363 S4 RNA-binding domain VSAL_I0666 SM00382 ATPases associated with a variety of cellular activities VSAL_I0666 SM01086 C-terminal, D2-small domain, of ClpB protein VSAL_I0687 SM00925 MltA specific insert domain VSAL_I0694 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VSAL_I0694 SM00475 5'-3' exonuclease VSAL_I0696 SM00267 diguanylate cyclase VSAL_I0697 SM00028 Tetratricopeptide repeats VSAL_I0708 SM00354 helix_turn _helix lactose operon repressor VSAL_I0720 SM00271 DnaJ molecular chaperone homology domain VSAL_I0725 SM00562 VSAL_I0725 VSAL_I0727 SM00028 Tetratricopeptide repeats VSAL_I0732 SM00564 beta-propeller repeat VSAL_I0737 SM00116 Domain in cystathionine beta-synthase and other proteins. VSAL_I0737 SM01240 VSAL_I0737 VSAL_I0749 SM00062 Bacterial periplasmic substrate-binding proteins VSAL_I0750 SM01211 VSAL_I0750 VSAL_I0757 SM00495 Chitin-binding domain type 3 VSAL_I0757 SM00636 VSAL_I0757 VSAL_I0777 SM00644 VSAL_I0777 VSAL_I0786 SM01400 VSAL_I0786 VSAL_I0790 SM00937 VSAL_I0790 VSAL_I0799 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_I0799 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_I0803 SM00422 helix_turn_helix, mercury resistance VSAL_I0814 SM00387 Histidine kinase-like ATPases VSAL_I0821 SM00382 ATPases associated with a variety of cellular activities VSAL_I0821 SM00464 Found in ATP-dependent protease La (LON) VSAL_I0822 SM00411 bacterial (prokaryotic) histone like domain VSAL_I0826 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VSAL_I0846 SM00861 Transketolase, pyrimidine binding domain VSAL_I0849 SM00881 CoA binding domain VSAL_I0851 SM00382 ATPases associated with a variety of cellular activities VSAL_I0856 SM00729 Elongator protein 3, MiaB family, Radical SAM VSAL_I0868 SM00382 ATPases associated with a variety of cellular activities VSAL_I0886 SM00382 ATPases associated with a variety of cellular activities VSAL_I0886 SM00930 VSAL_I0886 VSAL_I0899 SM01130 VSAL_I0899 VSAL_I0911 SM00487 DEAD-like helicases superfamily VSAL_I0911 SM00491 VSAL_I0911 VSAL_I0920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_I0930 SM00387 Histidine kinase-like ATPases VSAL_I0930 SM00388 His Kinase A (phosphoacceptor) domain VSAL_I0930 SM00448 cheY-homologous receiver domain VSAL_I0933 SM00861 Transketolase, pyrimidine binding domain VSAL_I0938 SM00981 VSAL_I0938 VSAL_I0951 SM00900 VSAL_I0951 VSAL_I0960 SM00530 Helix-turn-helix XRE-family like proteins VSAL_I0962 SM00487 DEAD-like helicases superfamily VSAL_I0977 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VSAL_I0979 SM00729 Elongator protein 3, MiaB family, Radical SAM VSAL_I0982 SM00936 Penicillin-binding protein 5, C-terminal domain VSAL_I0993 SM00116 Domain in cystathionine beta-synthase and other proteins. VSAL_I0993 SM01091 Transporter associated domain VSAL_I0996 SM00729 Elongator protein 3, MiaB family, Radical SAM VSAL_I1004 SM00978 VSAL_I1004 VSAL_I1056 SM01057 Eukaryotic-type carbonic anhydrase VSAL_I1064 SM00474 3'-5' exonuclease VSAL_I1071 SM00825 Beta-ketoacyl synthase VSAL_I1073 SM00859 Semialdehyde dehydrogenase, NAD binding domain VSAL_I1082 SM00448 cheY-homologous receiver domain VSAL_I1085 SM00382 ATPases associated with a variety of cellular activities VSAL_I1087 SM00493 VSAL_I1087 VSAL_I1091 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSAL_I1095 SM00342 helix_turn_helix, arabinose operon control protein VSAL_I1102 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VSAL_I1112 SM00331 Sigma factor PP2C-like phosphatases VSAL_I1112 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain VSAL_I1119 SM00382 ATPases associated with a variety of cellular activities VSAL_I1119 SM01086 C-terminal, D2-small domain, of ClpB protein VSAL_I1129 SM00487 DEAD-like helicases superfamily VSAL_I1129 SM00491 VSAL_I1129 VSAL_I1155 SM00481 DNA polymerase alpha chain like domain VSAL_I1157 SM00387 Histidine kinase-like ATPases VSAL_I1157 SM00448 cheY-homologous receiver domain VSAL_I1159 SM00363 S4 RNA-binding domain VSAL_I1164 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VSAL_I1164 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VSAL_I1164 SM00493 VSAL_I1164 VSAL_I1177 SM00382 ATPases associated with a variety of cellular activities VSAL_I1177 SM01086 C-terminal, D2-small domain, of ClpB protein VSAL_I1179 SM00240 Forkhead associated domain VSAL_I1187 SM00342 helix_turn_helix, arabinose operon control protein VSAL_I1191 SM00342 helix_turn_helix, arabinose operon control protein VSAL_I1195 SM00788 Adenylosuccinate synthetase VSAL_I1212 SM00342 helix_turn_helix, arabinose operon control protein VSAL_I1214 SM00849 Metallo-beta-lactamase superfamily VSAL_I1216 SM00530 Helix-turn-helix XRE-family like proteins VSAL_I1224 SM00862 Transcriptional regulatory protein, C terminal VSAL_I1231 SM00062 Bacterial periplasmic substrate-binding proteins VSAL_I1247 SM00507 HNH nucleases VSAL_I1253 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain VSAL_I1255 SM00271 DnaJ molecular chaperone homology domain VSAL_I1262 SM01322 VSAL_I1262 VSAL_I1271 SM00267 diguanylate cyclase VSAL_I1274 SM00919 Malic enzyme, NAD binding domain VSAL_I1274 SM01274 VSAL_I1274 VSAL_I1286 SM00587 ZnF_C4 abd HLH domain containing kinases domain VSAL_I1289 SM00642 Alpha-amylase domain VSAL_I1294 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_I1294 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_I1306 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSAL_I1312 SM00487 DEAD-like helicases superfamily VSAL_I1312 SM00490 helicase superfamily c-terminal domain VSAL_I1318 SM00448 cheY-homologous receiver domain VSAL_I1318 SM00850 LytTr DNA-binding domain VSAL_I1319 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VSAL_I1367 SM00354 helix_turn _helix lactose operon repressor VSAL_I1371 SM00382 ATPases associated with a variety of cellular activities VSAL_I1389 SM00363 S4 RNA-binding domain VSAL_I1391 SM01144 VSAL_I1391 VSAL_I1397 SM00852 Probable molybdopterin binding domain VSAL_I1399 SM00382 ATPases associated with a variety of cellular activities VSAL_I1403 SM00387 Histidine kinase-like ATPases VSAL_I1403 SM00388 His Kinase A (phosphoacceptor) domain VSAL_I1421 SM00450 Rhodanese Homology Domain VSAL_I1437 SM00796 Allophanate hydrolase subunit 1 VSAL_I1438 SM00797 Allophanate hydrolase subunit 2 VSAL_I1447 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSAL_I1453 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VSAL_I1460 SM00342 helix_turn_helix, arabinose operon control protein VSAL_I1486 SM00357 Cold shock protein domain VSAL_I1504 SM01266 VSAL_I1504 VSAL_I1513 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSAL_I1534 SM00062 Bacterial periplasmic substrate-binding proteins VSAL_I1536 SM00841 Elongation factor P, C-terminal VSAL_I1536 SM01185 VSAL_I1536 VSAL_I1541 SM00382 ATPases associated with a variety of cellular activities VSAL_I1543 SM00945 ProQ/FINO family VSAL_I1544 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VSAL_I1544 SM00245 tail specific protease VSAL_I1551 SM00981 VSAL_I1551 VSAL_I1553 SM00382 ATPases associated with a variety of cellular activities VSAL_I1560 SM00387 Histidine kinase-like ATPases VSAL_I1560 SM00388 His Kinase A (phosphoacceptor) domain VSAL_I1560 SM00448 cheY-homologous receiver domain VSAL_I1561 SM00897 FIST N domain VSAL_I1561 SM01204 VSAL_I1561 VSAL_I1571 SM00100 Cyclic nucleotide-monophosphate binding domain VSAL_I1571 SM00419 helix_turn_helix, cAMP Regulatory protein VSAL_I1580 SM00382 ATPases associated with a variety of cellular activities VSAL_I1599 SM00495 Chitin-binding domain type 3 VSAL_I1608 SM00354 helix_turn _helix lactose operon repressor VSAL_I1611 SM00342 helix_turn_helix, arabinose operon control protein VSAL_I1618 SM00354 helix_turn _helix lactose operon repressor VSAL_I1622 SM00257 Lysin motif VSAL_I1636 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_I1673 SM00478 endonuclease III VSAL_I1674 SM00271 DnaJ molecular chaperone homology domain VSAL_I1674 SM00671 Sel1-like repeats. VSAL_I1680 SM00479 VSAL_I1680 VSAL_I1700 SM00382 ATPases associated with a variety of cellular activities VSAL_I1700 SM00487 DEAD-like helicases superfamily VSAL_I1700 SM00490 helicase superfamily c-terminal domain VSAL_I1700 SM00847 Helicase associated domain (HA2) Add an annotation VSAL_I1709 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VSAL_I1724 SM00316 Ribosomal protein S1-like RNA-binding domain VSAL_I1731 SM00411 bacterial (prokaryotic) histone like domain VSAL_I1732 SM00873 B3/4 domain VSAL_I1732 SM00874 tRNA synthetase B5 domain VSAL_I1732 SM00896 Ferredoxin-fold anticodon binding domain VSAL_I1750 SM00729 Elongator protein 3, MiaB family, Radical SAM VSAL_I1756 SM00382 ATPases associated with a variety of cellular activities VSAL_I1760 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VSAL_I1763 SM01022 VSAL_I1763 VSAL_I1765 SM00014 Acid phosphatase homologues VSAL_I1767 SM00434 DNA Topoisomerase IV VSAL_I1773 SM00852 Probable molybdopterin binding domain VSAL_I1782 SM00849 Metallo-beta-lactamase superfamily VSAL_I1790 SM00487 DEAD-like helicases superfamily VSAL_I1801 SM00530 Helix-turn-helix XRE-family like proteins VSAL_I1808 SM00829 Enoylreductase VSAL_I1823 SM00479 VSAL_I1823 VSAL_I1824 SM00267 diguanylate cyclase VSAL_I1824 SM01079 VSAL_I1824 VSAL_I1836 SM00382 ATPases associated with a variety of cellular activities VSAL_I1837 SM00382 ATPases associated with a variety of cellular activities VSAL_I1839 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VSAL_I1839 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VSAL_I1840 SM00344 helix_turn_helix ASNC type VSAL_I1841 SM00843 VSAL_I1841 VSAL_I1843 SM00382 ATPases associated with a variety of cellular activities VSAL_I1849 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VSAL_I1860 SM00448 cheY-homologous receiver domain VSAL_I1862 SM00479 VSAL_I1862 VSAL_I1866 SM00478 endonuclease III VSAL_I1866 SM00525 VSAL_I1866 VSAL_I1868 SM00900 VSAL_I1868 VSAL_I1873 SM00487 DEAD-like helicases superfamily VSAL_I1873 SM00490 helicase superfamily c-terminal domain VSAL_I1874 SM00382 ATPases associated with a variety of cellular activities VSAL_I1874 SM00448 cheY-homologous receiver domain VSAL_I1877 SM00729 Elongator protein 3, MiaB family, Radical SAM VSAL_I1888 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VSAL_I1889 SM00382 ATPases associated with a variety of cellular activities VSAL_I1903 SM00342 helix_turn_helix, arabinose operon control protein VSAL_I1916 SM00829 Enoylreductase VSAL_I1932 SM00852 Probable molybdopterin binding domain VSAL_I1934 SM00155 Phospholipase D. Active site motifs. VSAL_I1937 SM00052 Putative diguanylate phosphodiesterase VSAL_I1940 SM00840 VSAL_I1940 VSAL_I1949 SM00382 ATPases associated with a variety of cellular activities VSAL_I1950 SM00382 ATPases associated with a variety of cellular activities VSAL_I1951 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_I1951 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_I1952 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. VSAL_I1957 SM00382 ATPases associated with a variety of cellular activities VSAL_I1958 SM00062 Bacterial periplasmic substrate-binding proteins VSAL_I1958 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VSAL_I1967 SM00344 helix_turn_helix ASNC type VSAL_I1974 SM00382 ATPases associated with a variety of cellular activities VSAL_I1977 SM00267 diguanylate cyclase VSAL_I1978 SM00387 Histidine kinase-like ATPases VSAL_I1979 SM00448 cheY-homologous receiver domain VSAL_I1979 SM00862 Transcriptional regulatory protein, C terminal VSAL_I1983 SM00354 helix_turn _helix lactose operon repressor VSAL_I1985 SM00448 cheY-homologous receiver domain VSAL_I1985 SM00862 Transcriptional regulatory protein, C terminal VSAL_I1987 SM00363 S4 RNA-binding domain VSAL_I1989 SM00382 ATPases associated with a variety of cellular activities VSAL_I2007 SM00014 Acid phosphatase homologues VSAL_I2018 SM00363 S4 RNA-binding domain VSAL_I2023 SM00382 ATPases associated with a variety of cellular activities VSAL_I2047 SM00014 Acid phosphatase homologues VSAL_I2048 SM00028 Tetratricopeptide repeats VSAL_I2048 SM00671 Sel1-like repeats. VSAL_I2054 SM00382 ATPases associated with a variety of cellular activities VSAL_I2057 SM00062 Bacterial periplasmic substrate-binding proteins VSAL_I2059 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSAL_I2059 SM00866 VSAL_I2059 VSAL_I2064 SM00116 Domain in cystathionine beta-synthase and other proteins. VSAL_I2068 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSAL_I2074 SM01059 Chloramphenicol acetyltransferase VSAL_I2075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_I2080 SM00342 helix_turn_helix, arabinose operon control protein VSAL_I2081 SM00155 Phospholipase D. Active site motifs. VSAL_I2082 SM00487 DEAD-like helicases superfamily VSAL_I2082 SM00490 helicase superfamily c-terminal domain VSAL_I2092 SM00825 Beta-ketoacyl synthase VSAL_I2104 SM00563 Phosphate acyltransferases VSAL_I2110 SM00836 DALR anticodon binding domain VSAL_I2110 SM01016 Arginyl tRNA synthetase N terminal dom VSAL_I2121 SM00382 ATPases associated with a variety of cellular activities VSAL_I2130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_I2130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_I2131 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_I2131 SM00387 Histidine kinase-like ATPases VSAL_I2131 SM00388 His Kinase A (phosphoacceptor) domain VSAL_I2131 SM00448 cheY-homologous receiver domain VSAL_I2133 SM00851 MGS-like domain VSAL_I2140 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VSAL_I2140 SM00465 GIY-YIG type nucleases (URI domain) VSAL_I2141 SM00421 helix_turn_helix, Lux Regulon VSAL_I2141 SM00448 cheY-homologous receiver domain VSAL_I2142 SM00486 DNA polymerase type-B family VSAL_I2145 SM00528 Domain in histone-like proteins of HNS family VSAL_I2147 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSAL_I2153 SM00267 diguanylate cyclase VSAL_I2155 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VSAL_I2155 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VSAL_I2155 SM00493 VSAL_I2155 VSAL_I2158 SM00870 VSAL_I2158 VSAL_I2159 SM00859 Semialdehyde dehydrogenase, NAD binding domain VSAL_I2165 SM00855 Phosphoglycerate mutase family VSAL_I2166 SM00463 Small MutS-related domain VSAL_I2173 SM00267 diguanylate cyclase VSAL_I2186 SM00448 cheY-homologous receiver domain VSAL_I2189 SM00487 DEAD-like helicases superfamily VSAL_I2189 SM00490 helicase superfamily c-terminal domain VSAL_I2193 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_I2193 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_I2198 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VSAL_I2198 SM00382 ATPases associated with a variety of cellular activities VSAL_I2199 SM00849 Metallo-beta-lactamase superfamily VSAL_I2208 SM00763 PrkA AAA domain VSAL_I2212 SM00357 Cold shock protein domain VSAL_I2214 SM00382 ATPases associated with a variety of cellular activities VSAL_I2214 SM01086 C-terminal, D2-small domain, of ClpB protein VSAL_I2215 SM00316 Ribosomal protein S1-like RNA-binding domain VSAL_I2220 SM00316 Ribosomal protein S1-like RNA-binding domain VSAL_I2222 SM00411 bacterial (prokaryotic) histone like domain VSAL_I2225 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VSAL_I2231 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSAL_I2233 SM00316 Ribosomal protein S1-like RNA-binding domain VSAL_I2234 SM00363 S4 RNA-binding domain VSAL_I2240 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. VSAL_I2241 SM00822 VSAL_I2241 VSAL_I2242 SM00825 Beta-ketoacyl synthase VSAL_I2257 SM00899 VSAL_I2257 VSAL_I2281 SM00382 ATPases associated with a variety of cellular activities VSAL_I2283 SM00260 Two component signalling adaptor domain VSAL_I2284 SM00260 Two component signalling adaptor domain VSAL_I2286 SM00448 cheY-homologous receiver domain VSAL_I2287 SM00073 Histidine Phosphotransfer domain VSAL_I2287 SM00260 Two component signalling adaptor domain VSAL_I2287 SM00387 Histidine kinase-like ATPases VSAL_I2287 SM01231 VSAL_I2287 VSAL_I2289 SM00448 cheY-homologous receiver domain VSAL_I2292 SM00382 ATPases associated with a variety of cellular activities VSAL_I2292 SM00962 SRP54-type protein, GTPase domain VSAL_I2305 SM00382 ATPases associated with a variety of cellular activities VSAL_I2310 SM00382 ATPases associated with a variety of cellular activities VSAL_I2310 SM00448 cheY-homologous receiver domain VSAL_I2311 SM00091 PAS domain VSAL_I2311 SM00387 Histidine kinase-like ATPases VSAL_I2311 SM00388 His Kinase A (phosphoacceptor) domain VSAL_I2312 SM00382 ATPases associated with a variety of cellular activities VSAL_I2330 SM00047 Lysozyme subfamily 2 VSAL_I2339 SM00138 Methyltransferase, chemotaxis proteins VSAL_I2340 SM00260 Two component signalling adaptor domain VSAL_I2340 SM00448 cheY-homologous receiver domain VSAL_I2341 SM00858 VSAL_I2341 VSAL_I2348 SM00267 diguanylate cyclase VSAL_I2353 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VSAL_I2353 SM00292 breast cancer carboxy-terminal domain VSAL_I2353 SM00532 Ligase N family VSAL_I2354 SM00771 ZipA, C-terminal domain (FtsZ-binding) VSAL_I2369 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_I2369 SM00387 Histidine kinase-like ATPases VSAL_I2370 SM00421 helix_turn_helix, Lux Regulon VSAL_I2370 SM00448 cheY-homologous receiver domain VSAL_I2379 SM01130 VSAL_I2379 VSAL_I2398 SM00479 VSAL_I2398 VSAL_I2401 SM00849 Metallo-beta-lactamase superfamily VSAL_I2402 SM00257 Lysin motif VSAL_I2408 SM00938 Nitrogen regulatory protein P-II VSAL_I2410 SM00977 TilS substrate C-terminal domain VSAL_I2412 SM00481 DNA polymerase alpha chain like domain VSAL_I2418 SM00935 Outer membrane protein (OmpH-like) VSAL_I2420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VSAL_I2429 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSAL_I2434 SM01323 VSAL_I2434 VSAL_I2437 SM00116 Domain in cystathionine beta-synthase and other proteins. VSAL_I2452 SM00382 ATPases associated with a variety of cellular activities VSAL_I2456 SM00091 PAS domain VSAL_I2456 SM00387 Histidine kinase-like ATPases VSAL_I2456 SM00388 His Kinase A (phosphoacceptor) domain VSAL_I2457 SM00448 cheY-homologous receiver domain VSAL_I2457 SM00862 Transcriptional regulatory protein, C terminal VSAL_I2465 SM00354 helix_turn _helix lactose operon repressor VSAL_I2470 SM00271 DnaJ molecular chaperone homology domain VSAL_I2482 SM00382 ATPases associated with a variety of cellular activities VSAL_I2494 SM00862 Transcriptional regulatory protein, C terminal VSAL_I2504 SM00382 ATPases associated with a variety of cellular activities VSAL_I2507 SM00257 Lysin motif VSAL_I2514 SM01192 VSAL_I2514 VSAL_I2514 SM01193 VSAL_I2514 VSAL_I2518 SM00954 Region found in RelA / SpoT proteins VSAL_I2520 SM00073 Histidine Phosphotransfer domain VSAL_I2520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_I2520 SM00387 Histidine kinase-like ATPases VSAL_I2520 SM00388 His Kinase A (phosphoacceptor) domain VSAL_I2520 SM00448 cheY-homologous receiver domain VSAL_I2525 SM00358 Double-stranded RNA binding motif VSAL_I2525 SM00535 Ribonuclease III family VSAL_I2527 SM00838 Elongation factor G C-terminus VSAL_I2551 SM00986 Uracil DNA glycosylase superfamily VSAL_I2551 SM00987 UreE urease accessory protein, C-terminal domain VSAL_I2552 SM00518 AP endonuclease family 2 VSAL_I2558 SM00448 cheY-homologous receiver domain VSAL_I2558 SM00862 Transcriptional regulatory protein, C terminal VSAL_I2560 SM00073 Histidine Phosphotransfer domain VSAL_I2560 SM00091 PAS domain VSAL_I2560 SM00387 Histidine kinase-like ATPases VSAL_I2560 SM00388 His Kinase A (phosphoacceptor) domain VSAL_I2560 SM00448 cheY-homologous receiver domain VSAL_I2575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_I2575 SM00387 Histidine kinase-like ATPases VSAL_I2575 SM00388 His Kinase A (phosphoacceptor) domain VSAL_I2575 SM00448 cheY-homologous receiver domain VSAL_I2579 SM00382 ATPases associated with a variety of cellular activities VSAL_I2580 SM00382 ATPases associated with a variety of cellular activities VSAL_I2584 SM01068 Putative carbohydrate binding domain VSAL_I2586 SM00382 ATPases associated with a variety of cellular activities VSAL_I2590 SM00938 Nitrogen regulatory protein P-II VSAL_I2603 SM00487 DEAD-like helicases superfamily VSAL_I2603 SM00490 helicase superfamily c-terminal domain VSAL_I2603 SM00847 Helicase associated domain (HA2) Add an annotation VSAL_I2615 SM00382 ATPases associated with a variety of cellular activities VSAL_I2616 SM00947 Carbonic anhydrase VSAL_I2626 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSAL_I2626 SM00895 VSAL_I2626 VSAL_I2627 SM00644 VSAL_I2627 VSAL_I2637 SM00957 SecA DEAD-like domain VSAL_I2637 SM00958 SecA preprotein cross-linking domain VSAL_I2640 SM00864 Tubulin/FtsZ family, GTPase domain VSAL_I2640 SM00865 Tubulin/FtsZ family, C-terminal domain VSAL_I2641 SM00842 Cell division protein FtsA VSAL_I2667 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VSAL_I2668 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VSAL_I2669 SM00434 DNA Topoisomerase IV VSAL_I2670 SM00387 Histidine kinase-like ATPases VSAL_I2670 SM00433 TopoisomeraseII VSAL_I2678 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_I2678 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_I2680 SM00880 VSAL_I2680 VSAL_I2680 SM01118 VSAL_I2680 VSAL_I2683 SM00287 Bacterial SH3 domain homologues VSAL_I2688 SM00382 ATPases associated with a variety of cellular activities VSAL_I2692 SM00905 Dihydroneopterin aldolase VSAL_I2693 SM01207 VSAL_I2693 VSAL_I2696 SM00400 zinc finger VSAL_I2696 SM00493 VSAL_I2696 VSAL_I2696 SM00766 DNA primase DnaG DnaB-binding VSAL_I2702 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSAL_I2704 SM00267 diguanylate cyclase VSAL_I2736 SM01150 VSAL_I2736 VSAL_I2737 SM00100 Cyclic nucleotide-monophosphate binding domain VSAL_I2737 SM00419 helix_turn_helix, cAMP Regulatory protein VSAL_I2739 SM00382 ATPases associated with a variety of cellular activities VSAL_I2739 SM01086 C-terminal, D2-small domain, of ClpB protein VSAL_I2742 SM00354 helix_turn _helix lactose operon repressor VSAL_I2743 SM00487 DEAD-like helicases superfamily VSAL_I2743 SM00490 helicase superfamily c-terminal domain VSAL_I2745 SM00919 Malic enzyme, NAD binding domain VSAL_I2745 SM01274 VSAL_I2745 VSAL_I2756 SM00859 Semialdehyde dehydrogenase, NAD binding domain VSAL_I2767 SM00967 RNA 2'-O ribose methyltransferase substrate binding VSAL_I2768 SM00316 Ribosomal protein S1-like RNA-binding domain VSAL_I2768 SM00357 Cold shock protein domain VSAL_I2768 SM00955 VSAL_I2768 VSAL_I2771 SM00671 Sel1-like repeats. VSAL_I2772 SM00788 Adenylosuccinate synthetase VSAL_I2774 SM00244 prohibitin homologues VSAL_I2775 SM00244 prohibitin homologues VSAL_I2779 SM00853 MutL C terminal dimerisation domain VSAL_I2779 SM01340 VSAL_I2779 VSAL_I2780 SM00257 Lysin motif VSAL_I2780 SM00646 VSAL_I2780 VSAL_I2783 SM00479 VSAL_I2783 VSAL_I2792 SM00841 Elongation factor P, C-terminal VSAL_I2792 SM01185 VSAL_I2792 VSAL_I2797 SM00448 cheY-homologous receiver domain VSAL_I2797 SM00862 Transcriptional regulatory protein, C terminal VSAL_I2798 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_I2798 SM00387 Histidine kinase-like ATPases VSAL_I2798 SM00388 His Kinase A (phosphoacceptor) domain VSAL_I2800 SM00971 Serine acetyltransferase, N-terminal VSAL_I2803 SM00450 Rhodanese Homology Domain VSAL_I2818 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VSAL_I2819 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VSAL_I2820 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VSAL_I2820 SM00267 diguanylate cyclase VSAL_I2823 SM00420 helix_turn_helix, Deoxyribose operon repressor VSAL_I2823 SM01134 VSAL_I2823 VSAL_I2824 SM00421 helix_turn_helix, Lux Regulon VSAL_I2824 SM00448 cheY-homologous receiver domain VSAL_I2829 SM00387 Histidine kinase-like ATPases VSAL_I2829 SM00388 His Kinase A (phosphoacceptor) domain VSAL_I2829 SM00448 cheY-homologous receiver domain VSAL_I2831 SM00100 Cyclic nucleotide-monophosphate binding domain VSAL_I2831 SM00116 Domain in cystathionine beta-synthase and other proteins. VSAL_I2832 SM00479 VSAL_I2832 VSAL_I2836 SM00878 Biotin carboxylase C-terminal domain VSAL_I2841 SM00422 helix_turn_helix, mercury resistance VSAL_I2842 SM00798 AICARFT/IMPCHase bienzyme VSAL_I2842 SM00851 MGS-like domain VSAL_I2843 SM01209 VSAL_I2843 VSAL_I2843 SM01210 VSAL_I2843 VSAL_I2846 SM00411 bacterial (prokaryotic) histone like domain VSAL_I2858 SM00421 helix_turn_helix, Lux Regulon VSAL_I2865 SM00663 RNA polymerase I subunit A N-terminus VSAL_I2870 SM00649 Ribosomal protein L11/L12 VSAL_I2871 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VSAL_I2871 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VSAL_I2879 SM00155 Phospholipase D. Active site motifs. VSAL_I2883 SM00360 RNA recognition motif VSAL_I2894 SM00563 Phosphate acyltransferases VSAL_I2899 SM00450 Rhodanese Homology Domain VSAL_I2902 SM00382 ATPases associated with a variety of cellular activities VSAL_I2903 SM00382 ATPases associated with a variety of cellular activities VSAL_I2903 SM00962 SRP54-type protein, GTPase domain VSAL_I2903 SM00963 SRP54-type protein, helical bundle domain VSAL_I2910 SM00487 DEAD-like helicases superfamily VSAL_I2910 SM00490 helicase superfamily c-terminal domain VSAL_I2923 SM00382 ATPases associated with a variety of cellular activities VSAL_I2926 SM00363 S4 RNA-binding domain VSAL_I2930 SM00052 Putative diguanylate phosphodiesterase VSAL_I2940 SM01230 VSAL_I2940 VSAL_I2944 SM00344 helix_turn_helix ASNC type VSAL_I2954 SM01144 VSAL_I2954 VSAL_I2966 SM00642 Alpha-amylase domain VSAL_I2972 SM00829 Enoylreductase VSAL_I2988 SM00876 Biotin and Thiamin Synthesis associated domain VSAL_I3004 SM01004 Delta-aminolevulinic acid dehydratase VSAL_I3011 SM00858 VSAL_I3011 VSAL_I3047 SM00487 DEAD-like helicases superfamily VSAL_I3047 SM00490 helicase superfamily c-terminal domain VSAL_I3059 SM00382 ATPases associated with a variety of cellular activities VSAL_I3067 SM00470 ParB-like nuclease domain VSAL_I3070 SM01228 VSAL_I3070 VSAL_II0011 SM00487 DEAD-like helicases superfamily VSAL_II0011 SM00490 helicase superfamily c-terminal domain VSAL_II0020 SM00112 Cadherin repeats. VSAL_II0020 SM00736 Dystroglycan-type cadherin-like domains. VSAL_II0028 SM00671 Sel1-like repeats. VSAL_II0037 SM00028 Tetratricopeptide repeats VSAL_II0037 SM00421 helix_turn_helix, Lux Regulon VSAL_II0050 SM01081 Putative carbohydrate binding domain VSAL_II0052 SM00267 diguanylate cyclase VSAL_II0052 SM00448 cheY-homologous receiver domain VSAL_II0053 SM00387 Histidine kinase-like ATPases VSAL_II0053 SM00388 His Kinase A (phosphoacceptor) domain VSAL_II0053 SM00448 cheY-homologous receiver domain VSAL_II0057 SM00448 cheY-homologous receiver domain VSAL_II0060 SM00382 ATPases associated with a variety of cellular activities VSAL_II0063 SM00382 ATPases associated with a variety of cellular activities VSAL_II0077 SM00342 helix_turn_helix, arabinose operon control protein VSAL_II0077 SM00871 Bacterial transcription activator, effector binding domain VSAL_II0079 SM00631 VSAL_II0079 VSAL_II0089 SM00354 helix_turn _helix lactose operon repressor VSAL_II0103 SM00420 helix_turn_helix, Deoxyribose operon repressor VSAL_II0103 SM01134 VSAL_II0103 VSAL_II0124 SM00382 ATPases associated with a variety of cellular activities VSAL_II0142 SM00487 DEAD-like helicases superfamily VSAL_II0142 SM00490 helicase superfamily c-terminal domain VSAL_II0143 SM00267 diguanylate cyclase VSAL_II0144 SM00267 diguanylate cyclase VSAL_II0146 SM00487 DEAD-like helicases superfamily VSAL_II0146 SM00490 helicase superfamily c-terminal domain VSAL_II0147 SM00267 diguanylate cyclase VSAL_II0150 SM00382 ATPases associated with a variety of cellular activities VSAL_II0155 SM00829 Enoylreductase VSAL_II0166 SM00938 Nitrogen regulatory protein P-II VSAL_II0167 SM00116 Domain in cystathionine beta-synthase and other proteins. VSAL_II0170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_II0176 SM01154 VSAL_II0176 VSAL_II0180 SM00924 MgtE intracellular N domain VSAL_II0194 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_II0194 SM00387 Histidine kinase-like ATPases VSAL_II0194 SM00388 His Kinase A (phosphoacceptor) domain VSAL_II0197 SM00448 cheY-homologous receiver domain VSAL_II0197 SM00862 Transcriptional regulatory protein, C terminal VSAL_II0198 SM00387 Histidine kinase-like ATPases VSAL_II0198 SM00388 His Kinase A (phosphoacceptor) domain VSAL_II0201 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VSAL_II0210 SM01007 Class II Aldolase and Adducin N-terminal domain VSAL_II0215 SM01060 VSAL_II0215 VSAL_II0216 SM00450 Rhodanese Homology Domain VSAL_II0218 SM00382 ATPases associated with a variety of cellular activities VSAL_II0222 SM00479 VSAL_II0222 VSAL_II0225 SM00422 helix_turn_helix, mercury resistance VSAL_II0231 SM00260 Two component signalling adaptor domain VSAL_II0231 SM00448 cheY-homologous receiver domain VSAL_II0232 SM00642 Alpha-amylase domain VSAL_II0248 SM00220 Serine/Threonine protein kinases, catalytic domain VSAL_II0248 SM00331 Sigma factor PP2C-like phosphatases VSAL_II0248 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain VSAL_II0251 SM00220 Serine/Threonine protein kinases, catalytic domain VSAL_II0251 SM00364 Leucine-rich repeats, bacterial type VSAL_II0251 SM00369 Leucine-rich repeats, typical (most populated) subfamily VSAL_II0265 SM00966 SpoVT / AbrB like domain VSAL_II0267 SM00342 helix_turn_helix, arabinose operon control protein VSAL_II0274 SM01006 Siderophore biosynthesis protein domain VSAL_II0280 SM00244 prohibitin homologues VSAL_II0286 SM00382 ATPases associated with a variety of cellular activities VSAL_II0294 SM00052 Putative diguanylate phosphodiesterase VSAL_II0294 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VSAL_II0294 SM00267 diguanylate cyclase VSAL_II0306 SM00382 ATPases associated with a variety of cellular activities VSAL_II0306 SM00448 cheY-homologous receiver domain VSAL_II0307 SM00387 Histidine kinase-like ATPases VSAL_II0307 SM00388 His Kinase A (phosphoacceptor) domain VSAL_II0307 SM00448 cheY-homologous receiver domain VSAL_II0308 SM00331 Sigma factor PP2C-like phosphatases VSAL_II0308 SM00448 cheY-homologous receiver domain VSAL_II0315 SM00448 cheY-homologous receiver domain VSAL_II0316 SM00387 Histidine kinase-like ATPases VSAL_II0316 SM00388 His Kinase A (phosphoacceptor) domain VSAL_II0316 SM00448 cheY-homologous receiver domain VSAL_II0320 SM00052 Putative diguanylate phosphodiesterase VSAL_II0329 SM00331 Sigma factor PP2C-like phosphatases VSAL_II0329 SM00448 cheY-homologous receiver domain VSAL_II0343 SM00530 Helix-turn-helix XRE-family like proteins VSAL_II0344 SM00530 Helix-turn-helix XRE-family like proteins VSAL_II0354 SM00448 cheY-homologous receiver domain VSAL_II0354 SM00862 Transcriptional regulatory protein, C terminal VSAL_II0355 SM00387 Histidine kinase-like ATPases VSAL_II0363 SM00052 Putative diguanylate phosphodiesterase VSAL_II0363 SM00448 cheY-homologous receiver domain VSAL_II0372 SM00382 ATPases associated with a variety of cellular activities VSAL_II0381 SM00387 Histidine kinase-like ATPases VSAL_II0381 SM00388 His Kinase A (phosphoacceptor) domain VSAL_II0381 SM00448 cheY-homologous receiver domain VSAL_II0386 SM00420 helix_turn_helix, Deoxyribose operon repressor VSAL_II0386 SM01134 VSAL_II0386 VSAL_II0392 SM00052 Putative diguanylate phosphodiesterase VSAL_II0392 SM00267 diguanylate cyclase VSAL_II0393_2 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VSAL_II0393_2 SM00091 PAS domain VSAL_II0393_2 SM00387 Histidine kinase-like ATPases VSAL_II0393_2 SM00388 His Kinase A (phosphoacceptor) domain VSAL_II0393_2 SM00448 cheY-homologous receiver domain VSAL_II0398 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VSAL_II0401 SM00342 helix_turn_helix, arabinose operon control protein VSAL_II0403 SM00267 diguanylate cyclase VSAL_II0403 SM01079 VSAL_II0403 VSAL_II0405 SM00530 Helix-turn-helix XRE-family like proteins VSAL_II0417 SM00388 His Kinase A (phosphoacceptor) domain VSAL_II0418 SM00448 cheY-homologous receiver domain VSAL_II0418 SM00862 Transcriptional regulatory protein, C terminal VSAL_II0423 SM00020 Trypsin-like serine protease VSAL_II0426 SM00267 diguanylate cyclase VSAL_II0428 SM00062 Bacterial periplasmic substrate-binding proteins VSAL_II0428 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSAL_II0429 SM00487 DEAD-like helicases superfamily VSAL_II0429 SM00490 helicase superfamily c-terminal domain VSAL_II0436 SM00267 diguanylate cyclase VSAL_II0438 SM00316 Ribosomal protein S1-like RNA-binding domain VSAL_II0438 SM00357 Cold shock protein domain VSAL_II0438 SM00955 VSAL_II0438 VSAL_II0439 SM00487 DEAD-like helicases superfamily VSAL_II0439 SM00490 helicase superfamily c-terminal domain VSAL_II0445 SM00062 Bacterial periplasmic substrate-binding proteins VSAL_II0447 SM00382 ATPases associated with a variety of cellular activities VSAL_II0452 SM00267 diguanylate cyclase VSAL_II0474 SM00862 Transcriptional regulatory protein, C terminal VSAL_II0475 SM00382 ATPases associated with a variety of cellular activities VSAL_II0476 SM00382 ATPases associated with a variety of cellular activities VSAL_II0480 SM00382 ATPases associated with a variety of cellular activities VSAL_II0487 SM00382 ATPases associated with a variety of cellular activities VSAL_II0493 SM00267 diguanylate cyclase VSAL_II0498 SM00260 Two component signalling adaptor domain VSAL_II0498 SM00448 cheY-homologous receiver domain VSAL_II0501 SM01240 VSAL_II0501 VSAL_II0504 SM00387 Histidine kinase-like ATPases VSAL_II0513 SM00267 diguanylate cyclase VSAL_II0520 SM00861 Transketolase, pyrimidine binding domain VSAL_II0523 SM00327 von Willebrand factor (vWF) type A domain VSAL_II0524 SM00327 von Willebrand factor (vWF) type A domain VSAL_II0537 SM00953 VSAL_II0537 VSAL_II0565 SM00487 DEAD-like helicases superfamily VSAL_II0565 SM00490 helicase superfamily c-terminal domain VSAL_II0571 SM00360 RNA recognition motif VSAL_II0576 SM00354 helix_turn _helix lactose operon repressor VSAL_II0578 SM00642 Alpha-amylase domain VSAL_II0583 SM00382 ATPases associated with a variety of cellular activities VSAL_II0584 SM00327 von Willebrand factor (vWF) type A domain VSAL_II0591 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSAL_II0601 SM00448 cheY-homologous receiver domain VSAL_II0602 SM00091 PAS domain VSAL_II0606 SM00465 GIY-YIG type nucleases (URI domain) VSAL_II0614 SM00357 Cold shock protein domain VSAL_II0623 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VSAL_II0623 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VSAL_II0626 SM00782 PhnA Zinc-Ribbon VSAL_II0641 SM00881 CoA binding domain VSAL_II0646 SM00852 Probable molybdopterin binding domain VSAL_II0650 SM00448 cheY-homologous receiver domain VSAL_II0650 SM00862 Transcriptional regulatory protein, C terminal VSAL_II0651 SM00387 Histidine kinase-like ATPases VSAL_II0651 SM00388 His Kinase A (phosphoacceptor) domain VSAL_II0654 SM00342 helix_turn_helix, arabinose operon control protein VSAL_II0657 SM00487 DEAD-like helicases superfamily VSAL_II0657 SM00490 helicase superfamily c-terminal domain VSAL_II0662 SM00052 Putative diguanylate phosphodiesterase VSAL_II0668 SM00354 helix_turn _helix lactose operon repressor VSAL_II0671 SM00382 ATPases associated with a variety of cellular activities VSAL_II0675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_II0685 SM01350 VSAL_II0685 VSAL_II0693 SM00382 ATPases associated with a variety of cellular activities VSAL_II0696 SM00487 DEAD-like helicases superfamily VSAL_II0696 SM00490 helicase superfamily c-terminal domain VSAL_II0696 SM00982 VSAL_II0696 VSAL_II0696 SM01058 CarD-like/TRCF domain VSAL_II0704 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSAL_II0704 SM00866 VSAL_II0704 VSAL_II0712 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_II0712 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_II0723 SM00448 cheY-homologous receiver domain VSAL_II0723 SM00862 Transcriptional regulatory protein, C terminal VSAL_II0725 SM00271 DnaJ molecular chaperone homology domain VSAL_II0735 SM00382 ATPases associated with a variety of cellular activities VSAL_II0736 SM00849 Metallo-beta-lactamase superfamily VSAL_II0738 SM01131 VSAL_II0738 VSAL_II0743 SM00382 ATPases associated with a variety of cellular activities VSAL_II0756 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_II0756 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_II0756 SM01049 VSAL_II0756 VSAL_II0763 SM00530 Helix-turn-helix XRE-family like proteins VSAL_II0771 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_II0780 SM00382 ATPases associated with a variety of cellular activities VSAL_II0786 SM00062 Bacterial periplasmic substrate-binding proteins VSAL_II0787 SM00062 Bacterial periplasmic substrate-binding proteins VSAL_II0810 SM00382 ATPases associated with a variety of cellular activities VSAL_II0820 SM00342 helix_turn_helix, arabinose operon control protein VSAL_II0837 SM00829 Enoylreductase VSAL_II0851 SM00862 Transcriptional regulatory protein, C terminal VSAL_II0860 SM00729 Elongator protein 3, MiaB family, Radical SAM VSAL_II0860 SM00876 Biotin and Thiamin Synthesis associated domain VSAL_II0864 SM00091 PAS domain VSAL_II0864 SM00382 ATPases associated with a variety of cellular activities VSAL_II0885 SM00062 Bacterial periplasmic substrate-binding proteins VSAL_II0885 SM00267 diguanylate cyclase VSAL_II0889 SM00903 Flavin reductase like domain VSAL_II0891 SM01234 VSAL_II0891 VSAL_II0893 SM00342 helix_turn_helix, arabinose operon control protein VSAL_II0908 SM00382 ATPases associated with a variety of cellular activities VSAL_II0910 SM00342 helix_turn_helix, arabinose operon control protein VSAL_II0910 SM00871 Bacterial transcription activator, effector binding domain VSAL_II0911 SM00382 ATPases associated with a variety of cellular activities VSAL_II0921 SM00267 diguanylate cyclase VSAL_II0922 SM00448 cheY-homologous receiver domain VSAL_II0940 SM00342 helix_turn_helix, arabinose operon control protein VSAL_II0948 SM00382 ATPases associated with a variety of cellular activities VSAL_II0950 SM00052 Putative diguanylate phosphodiesterase VSAL_II0951 SM00267 diguanylate cyclase VSAL_II0952 SM00267 diguanylate cyclase VSAL_II0953 SM01091 Transporter associated domain VSAL_II0954 SM01266 VSAL_II0954 VSAL_II0958 SM00421 helix_turn_helix, Lux Regulon VSAL_II0965 SM00421 helix_turn_helix, Lux Regulon VSAL_II0977 SM00090 RIO-like kinase VSAL_II0997 SM00267 diguanylate cyclase VSAL_II1012 SM00387 Histidine kinase-like ATPases VSAL_II1012 SM00388 His Kinase A (phosphoacceptor) domain VSAL_II1012 SM00448 cheY-homologous receiver domain VSAL_II1022 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSAL_II1022 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSAL_II1031 SM00382 ATPases associated with a variety of cellular activities VSAL_II1034 SM00357 Cold shock protein domain VSAL_II1040 SM00028 Tetratricopeptide repeats VSAL_II1042 SM00344 helix_turn_helix ASNC type VSAL_II1056 SM00450 Rhodanese Homology Domain VSAL_II1061 SM00267 diguanylate cyclase VSAL_II1071 SM00267 diguanylate cyclase VSAL_II1076 SM00382 ATPases associated with a variety of cellular activities VSAL_II1095 SM00671 Sel1-like repeats. VSAL_II1098 SM00382 ATPases associated with a variety of cellular activities VSAL_II1099 SM00052 Putative diguanylate phosphodiesterase VSAL_II1099 SM00267 diguanylate cyclase VSAL_II1104 SM00470 ParB-like nuclease domain VSAL_p320_03 SM00857 Resolvase, N terminal domain VSAL_p320_13 SM00530 Helix-turn-helix XRE-family like proteins VSAL_p320_29 SM00382 ATPases associated with a variety of cellular activities VSAL_p840_28 SM00411 bacterial (prokaryotic) histone like domain VSAL_p840_38 SM00257 Lysin motif VSAL_p840_42 SM00857 Resolvase, N terminal domain VSAL_p840_44 SM00857 Resolvase, N terminal domain VSAL_p840_46 SM00257 Lysin motif VSAL_p840_66 SM00411 bacterial (prokaryotic) histone like domain VSAL_p840_71 SM00850 LytTr DNA-binding domain