locus-tag class description HYG86_00010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HYG86_00010 PF00056 lactate/malate dehydrogenase, NAD binding domain HYG86_00015 PF05145 Transition state regulatory protein AbrB HYG86_00030 PF00171 Aldehyde dehydrogenase family HYG86_00035 PF00027 Cyclic nucleotide-binding domain HYG86_00035 PF00520 Ion transport protein HYG86_00065 PF00872 Transposase, Mutator family HYG86_00070 PF05726 Pirin C-terminal cupin domain HYG86_00070 PF02678 Pirin HYG86_00090 PF03413 Peptidase propeptide and YPEB domain HYG86_00095 PF08281 Sigma-70, region 4 HYG86_00095 PF04542 Sigma-70 region 2 HYG86_00110 PF11799 impB/mucB/samB family C-terminal domain HYG86_00110 PF00817 impB/mucB/samB family HYG86_00110 PF11798 IMS family HHH motif HYG86_00130 PF02810 SEC-C motif HYG86_00130 PF07517 SecA DEAD-like domain HYG86_00130 PF07516 SecA Wing and Scaffold domain HYG86_00130 PF01043 SecA preprotein cross-linking domain HYG86_00150 PF01327 Polypeptide deformylase HYG86_00175 PF01695 IstB-like ATP binding protein HYG86_00215 PF01370 NAD dependent epimerase/dehydratase family HYG86_00250 PF00004 ATPase family associated with various cellular activities (AAA) HYG86_00255 PF13408 Recombinase zinc beta ribbon domain HYG86_00255 PF00239 Resolvase, N terminal domain HYG86_00255 PF07508 Recombinase HYG86_00280 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HYG86_00280 PF01348 Type II intron maturase HYG86_00290 PF05105 Bacteriophage holin family HYG86_00360 PF00574 Clp protease HYG86_00370 PF03354 Phage Terminase HYG86_00460 PF00476 DNA polymerase family A HYG86_00460 PF01612 3'-5' exonuclease HYG86_00460 PF01367 5'-3' exonuclease, C-terminal SAM fold HYG86_00460 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HYG86_00480 PF02772 S-adenosylmethionine synthetase, central domain HYG86_00480 PF00438 S-adenosylmethionine synthetase, N-terminal domain HYG86_00480 PF02773 S-adenosylmethionine synthetase, C-terminal domain HYG86_00540 PF00483 Nucleotidyl transferase HYG86_00545 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HYG86_00545 PF01348 Type II intron maturase HYG86_00550 PF00665 Integrase core domain HYG86_00555 PF00589 Phage integrase family HYG86_00555 PF02899 Phage integrase, N-terminal SAM-like domain HYG86_00560 PF02899 Phage integrase, N-terminal SAM-like domain HYG86_00560 PF00589 Phage integrase family HYG86_00565 PF00589 Phage integrase family HYG86_00570 PF00665 Integrase core domain HYG86_00575 PF01695 IstB-like ATP binding protein HYG86_00590 PF00589 Phage integrase family HYG86_00595 PF02899 Phage integrase, N-terminal SAM-like domain HYG86_00595 PF00589 Phage integrase family HYG86_00600 PF02899 Phage integrase, N-terminal SAM-like domain HYG86_00600 PF00589 Phage integrase family HYG86_00620 PF01370 NAD dependent epimerase/dehydratase family HYG86_00625 PF03023 Lipid II flippase MurJ HYG86_00630 PF01467 Cytidylyltransferase-like HYG86_00645 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HYG86_00660 PF00535 Glycosyl transferase family 2 HYG86_00670 PF02397 Bacterial sugar transferase HYG86_00675 PF07963 Prokaryotic N-terminal methylation motif HYG86_00685 PF00483 Nucleotidyl transferase HYG86_00695 PF02719 Polysaccharide biosynthesis protein HYG86_00700 PF01695 IstB-like ATP binding protein HYG86_00705 PF02796 Helix-turn-helix domain of resolvase HYG86_00705 PF00665 Integrase core domain HYG86_00725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HYG86_00725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HYG86_00725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HYG86_00730 PF00483 Nucleotidyl transferase HYG86_00755 PF00589 Phage integrase family HYG86_00760 PF00589 Phage integrase family HYG86_00760 PF02899 Phage integrase, N-terminal SAM-like domain HYG86_00765 PF02899 Phage integrase, N-terminal SAM-like domain HYG86_00765 PF00589 Phage integrase family HYG86_00775 PF16363 GDP-mannose 4,6 dehydratase HYG86_00780 PF03023 Lipid II flippase MurJ HYG86_00790 PF03102 NeuB family HYG86_00790 PF08666 SAF domain HYG86_00800 PF02348 Cytidylyltransferase HYG86_00805 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HYG86_00810 PF05159 Capsule polysaccharide biosynthesis protein HYG86_00815 PF01370 NAD dependent epimerase/dehydratase family HYG86_00820 PF08485 Polysaccharide biosynthesis protein C-terminal HYG86_00820 PF02719 Polysaccharide biosynthesis protein HYG86_00825 PF00483 Nucleotidyl transferase HYG86_00830 PF13457 GW (Gly-Tryp) dipeptide domain HYG86_00830 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HYG86_00830 PF01510 N-acetylmuramoyl-L-alanine amidase HYG86_00845 PF02350 UDP-N-acetylglucosamine 2-epimerase HYG86_00850 PF00534 Glycosyl transferases group 1 HYG86_00850 PF13579 Glycosyl transferase 4-like domain HYG86_00855 PF02397 Bacterial sugar transferase HYG86_00860 PF03816 Cell envelope-related transcriptional attenuator domain HYG86_00875 PF01676 Metalloenzyme superfamily HYG86_00880 PF01168 Alanine racemase, N-terminal domain HYG86_00885 PF00155 Aminotransferase class I and II HYG86_00890 PF02126 Phosphotriesterase family HYG86_00900 PF10797 Protein of unknown function HYG86_00905 PF10941 Protein of unknown function DUF2620 HYG86_00915 PF14502 Helix-turn-helix domain HYG86_00915 PF14503 YhfZ C-terminal domain HYG86_00920 PF05067 Manganese containing catalase HYG86_00930 PF00005 ABC transporter HYG86_00930 PF12704 MacB-like periplasmic core domain HYG86_00930 PF02687 FtsX-like permease family HYG86_00935 PF00005 ABC transporter HYG86_00940 PF12704 MacB-like periplasmic core domain HYG86_00940 PF00005 ABC transporter HYG86_00940 PF02687 FtsX-like permease family HYG86_00955 PF13188 PAS domain HYG86_00955 PF08448 PAS fold HYG86_00955 PF00072 Response regulator receiver domain HYG86_00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_00955 PF00512 His Kinase A (phospho-acceptor) domain HYG86_00970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HYG86_00970 PF00128 Alpha amylase, catalytic domain HYG86_00970 PF02806 Alpha amylase, C-terminal all-beta domain HYG86_00980 PF00155 Aminotransferase class I and II HYG86_00990 PF00107 Zinc-binding dehydrogenase HYG86_00990 PF08240 Alcohol dehydrogenase GroES-like domain HYG86_01000 PF07687 Peptidase dimerisation domain HYG86_01000 PF01546 Peptidase family M20/M25/M40 HYG86_01005 PF00202 Aminotransferase class-III HYG86_01010 PF00132 Bacterial transferase hexapeptide (six repeats) HYG86_01010 PF14602 Hexapeptide repeat of succinyl-transferase HYG86_01010 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal HYG86_01015 PF05173 Dihydrodipicolinate reductase, C-terminus HYG86_01015 PF01113 Dihydrodipicolinate reductase, N-terminus HYG86_01020 PF00701 Dihydrodipicolinate synthetase family HYG86_01025 PF01118 Semialdehyde dehydrogenase, NAD binding domain HYG86_01025 PF02774 Semialdehyde dehydrogenase, dimerisation domain HYG86_01030 PF01678 Diaminopimelate epimerase HYG86_01035 PF00696 Amino acid kinase family HYG86_01035 PF01842 ACT domain HYG86_01035 PF13840 ACT domain HYG86_01040 PF00571 CBS domain HYG86_01040 PF01769 Divalent cation transporter HYG86_01040 PF03448 MgtE intracellular N domain HYG86_01045 PF03796 DnaB-like helicase C terminal domain HYG86_01045 PF00772 DnaB-like helicase N terminal domain HYG86_01050 PF01695 IstB-like ATP binding protein HYG86_01060 PF01520 N-acetylmuramoyl-L-alanine amidase HYG86_01065 PF01791 DeoC/LacD family aldolase HYG86_01070 PF01975 Survival protein SurE HYG86_01080 PF00269 Small, acid-soluble spore proteins, alpha/beta type HYG86_01090 PF00989 PAS fold HYG86_01090 PF00512 His Kinase A (phospho-acceptor) domain HYG86_01090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_01135 PF01739 CheR methyltransferase, SAM binding domain HYG86_01135 PF03705 CheR methyltransferase, all-alpha domain HYG86_01140 PF00334 Nucleoside diphosphate kinase HYG86_01150 PF00202 Aminotransferase class-III HYG86_01165 PF00075 RNase H HYG86_01185 PF12704 MacB-like periplasmic core domain HYG86_01185 PF00005 ABC transporter HYG86_01185 PF02687 FtsX-like permease family HYG86_01225 PF00005 ABC transporter HYG86_01230 PF04397 LytTr DNA-binding domain HYG86_01230 PF00072 Response regulator receiver domain HYG86_01235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_01235 PF17203 Single cache domain 3 HYG86_01235 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HYG86_01240 PF14310 Fibronectin type III-like domain HYG86_01240 PF00933 Glycosyl hydrolase family 3 N terminal domain HYG86_01240 PF01915 Glycosyl hydrolase family 3 C-terminal domain HYG86_01245 PF01915 Glycosyl hydrolase family 3 C-terminal domain HYG86_01245 PF00933 Glycosyl hydrolase family 3 N terminal domain HYG86_01245 PF14310 Fibronectin type III-like domain HYG86_01250 PF08245 Mur ligase middle domain HYG86_01250 PF02875 Mur ligase family, glutamate ligase domain HYG86_01250 PF01225 Mur ligase family, catalytic domain HYG86_01260 PF04011 LemA family HYG86_01285 PF12704 MacB-like periplasmic core domain HYG86_01285 PF02687 FtsX-like permease family HYG86_01285 PF00005 ABC transporter HYG86_01290 PF00072 Response regulator receiver domain HYG86_01290 PF00512 His Kinase A (phospho-acceptor) domain HYG86_01290 PF09456 RcsC Alpha-Beta-Loop (ABL) HYG86_01290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_01295 PF00072 Response regulator receiver domain HYG86_01295 PF00486 Transcriptional regulatory protein, C terminal HYG86_01300 PF05362 Lon protease (S16) C-terminal proteolytic domain HYG86_01300 PF13180 PDZ domain HYG86_01320 PF01895 PhoU domain HYG86_01325 PF00005 ABC transporter HYG86_01330 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_01335 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_01340 PF12849 PBP superfamily domain HYG86_01355 PF02811 PHP domain HYG86_01360 PF13180 PDZ domain HYG86_01360 PF05362 Lon protease (S16) C-terminal proteolytic domain HYG86_01400 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HYG86_01440 PF00005 ABC transporter HYG86_01440 PF13732 Domain of unknown function (DUF4162) HYG86_01450 PF08281 Sigma-70, region 4 HYG86_01450 PF04542 Sigma-70 region 2 HYG86_01460 PF09547 Stage IV sporulation protein A (spore_IV_A) HYG86_01465 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HYG86_01465 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HYG86_01470 PF02660 Glycerol-3-phosphate acyltransferase HYG86_01475 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HYG86_01475 PF01926 50S ribosome-binding GTPase HYG86_01500 PF14045 YIEGIA protein HYG86_01515 PF01070 FMN-dependent dehydrogenase HYG86_01520 PF02401 LytB protein HYG86_01520 PF00575 S1 RNA binding domain HYG86_01525 PF02224 Cytidylate kinase HYG86_01530 PF18152 DAHP synthase ferredoxin-like domain HYG86_01530 PF00793 DAHP synthetase I family HYG86_01535 PF07736 Chorismate mutase type I HYG86_01545 PF05175 Methyltransferase small domain HYG86_01555 PF00005 ABC transporter HYG86_01560 PF01032 FecCD transport family HYG86_01570 PF05746 DALR anticodon binding domain HYG86_01570 PF02092 Glycyl-tRNA synthetase beta subunit HYG86_01585 PF02565 Recombination protein O C terminal HYG86_01585 PF11967 Recombination protein O N terminal HYG86_01590 PF07650 KH domain HYG86_01590 PF01926 50S ribosome-binding GTPase HYG86_01595 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HYG86_01600 PF05949 Bacterial protein of unknown function (DUF881) HYG86_01605 PF01219 Prokaryotic diacylglycerol kinase HYG86_01610 PF02130 Uncharacterized protein family UPF0054 HYG86_01615 PF01966 HD domain HYG86_01615 PF07698 7TM receptor with intracellular HD hydrolase HYG86_01615 PF07697 7TM-HD extracellular HYG86_01620 PF02562 PhoH-like protein HYG86_01630 PF07873 YabP family HYG86_01640 PF12127 SigmaW regulon antibacterial HYG86_01645 PF01957 NfeD-like C-terminal, partner-binding HYG86_01645 PF01972 Serine dehydrogenase proteinase HYG86_01650 PF09424 Yqey-like protein HYG86_01655 PF01165 Ribosomal protein S21 HYG86_01660 PF01230 HIT domain HYG86_01670 PF01230 HIT domain HYG86_01680 PF04055 Radical SAM superfamily HYG86_01680 PF01938 TRAM domain HYG86_01680 PF00919 Uncharacterized protein family UPF0004 HYG86_01685 PF04452 RNA methyltransferase HYG86_01695 PF00684 DnaJ central domain HYG86_01695 PF00226 DnaJ domain HYG86_01695 PF01556 DnaJ C terminal domain HYG86_01700 PF00012 Hsp70 protein HYG86_01705 PF01025 GrpE HYG86_01710 PF01628 HrcA protein C terminal domain HYG86_01715 PF06969 HemN C-terminal domain HYG86_01715 PF04055 Radical SAM superfamily HYG86_01720 PF00679 Elongation factor G C-terminus HYG86_01720 PF00009 Elongation factor Tu GTP binding domain HYG86_01720 PF03144 Elongation factor Tu domain 2 HYG86_01720 PF06421 GTP-binding protein LepA C-terminus HYG86_01735 PF03418 Germination protease HYG86_01745 PF01649 Ribosomal protein S20 HYG86_01755 PF13567 Domain of unknown function (DUF4131) HYG86_01755 PF00753 Metallo-beta-lactamase superfamily HYG86_01755 PF03772 Competence protein HYG86_01760 PF00156 Phosphoribosyl transferase domain HYG86_01765 PF07486 Cell Wall Hydrolase HYG86_01765 PF01471 Putative peptidoglycan binding domain HYG86_01770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HYG86_01770 PF00384 Molybdopterin oxidoreductase HYG86_01770 PF01568 Molydopterin dinucleotide binding domain HYG86_01775 PF17284 Spermidine synthase tetramerisation domain HYG86_01780 PF10531 SLBB domain HYG86_01790 PF13545 Crp-like helix-turn-helix domain HYG86_01790 PF00027 Cyclic nucleotide-binding domain HYG86_01795 PF13649 Methyltransferase domain HYG86_01810 PF01467 Cytidylyltransferase-like HYG86_01815 PF01985 CRS1 / YhbY (CRM) domain HYG86_01820 PF01926 50S ribosome-binding GTPase HYG86_01820 PF09269 Domain of unknown function (DUF1967) HYG86_01820 PF01018 GTP1/OBG HYG86_01830 PF01016 Ribosomal L27 protein HYG86_01840 PF00829 Ribosomal prokaryotic L21 protein HYG86_01845 PF10150 Ribonuclease E/G family HYG86_01845 PF00575 S1 RNA binding domain HYG86_01860 PF02163 Peptidase family M50 HYG86_01875 PF01098 Cell cycle protein HYG86_01880 PF03776 Septum formation topological specificity factor MinE HYG86_01885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HYG86_01890 PF03775 Septum formation inhibitor MinC, C-terminal domain HYG86_01895 PF00905 Penicillin binding protein transpeptidase domain HYG86_01905 PF04085 rod shape-determining protein MreC HYG86_01915 PF04002 RadC-like JAB domain HYG86_01920 PF02545 Maf-like protein HYG86_01945 PF00994 Probable molybdopterin binding domain HYG86_01950 PF13244 Domain of unknown function (DUF4040) HYG86_01950 PF00361 Proton-conducting membrane transporter HYG86_01950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HYG86_01955 PF00361 Proton-conducting membrane transporter HYG86_01960 PF00361 Proton-conducting membrane transporter HYG86_01965 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HYG86_01970 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HYG86_01985 PF03334 Na+/H+ antiporter subunit HYG86_01990 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HYG86_01995 PF01899 Na+/H+ ion antiporter subunit HYG86_02000 PF13187 4Fe-4S dicluster domain HYG86_02000 PF04060 Putative Fe-S cluster HYG86_02005 PF02508 Rnf-Nqr subunit, membrane protein HYG86_02010 PF02508 Rnf-Nqr subunit, membrane protein HYG86_02015 PF00890 FAD binding domain HYG86_02015 PF04205 FMN-binding domain HYG86_02015 PF03358 NADPH-dependent FMN reductase HYG86_02020 PF03116 NQR2, RnfD, RnfE family HYG86_02025 PF10531 SLBB domain HYG86_02025 PF13237 4Fe-4S dicluster domain HYG86_02025 PF13375 RnfC Barrel sandwich hybrid domain HYG86_02025 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HYG86_02030 PF10415 Fumarase C C-terminus HYG86_02030 PF00206 Lyase HYG86_02035 PF02629 CoA binding domain HYG86_02035 PF06971 Putative DNA-binding protein N-terminus HYG86_02045 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HYG86_02045 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HYG86_02045 PF00037 4Fe-4S binding domain HYG86_02055 PF13426 PAS domain HYG86_02055 PF00989 PAS fold HYG86_02055 PF00512 His Kinase A (phospho-acceptor) domain HYG86_02055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_02055 PF13188 PAS domain HYG86_02065 PF07733 Bacterial DNA polymerase III alpha NTPase domain HYG86_02065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HYG86_02065 PF14579 Helix-hairpin-helix motif HYG86_02065 PF02811 PHP domain HYG86_02065 PF01336 OB-fold nucleic acid binding domain HYG86_02110 PF00005 ABC transporter HYG86_02125 PF04239 Protein of unknown function (DUF421) HYG86_02155 PF02875 Mur ligase family, glutamate ligase domain HYG86_02155 PF08245 Mur ligase middle domain HYG86_02160 PF10458 Valyl tRNA synthetase tRNA binding arm HYG86_02160 PF00133 tRNA synthetases class I (I, L, M and V) HYG86_02160 PF08264 Anticodon-binding domain of tRNA HYG86_02165 PF08669 Glycine cleavage T-protein C-terminal barrel domain HYG86_02165 PF01571 Aminomethyltransferase folate-binding domain HYG86_02165 PF16350 FAD dependent oxidoreductase central domain HYG86_02165 PF01266 FAD dependent oxidoreductase HYG86_02170 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG86_02170 PF04324 BFD-like [2Fe-2S] binding domain HYG86_02180 PF14759 Reductase C-terminal HYG86_02180 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG86_02190 PF02603 HPr Serine kinase N terminus HYG86_02190 PF07475 HPr Serine kinase C-terminal domain HYG86_02205 PF00005 ABC transporter HYG86_02210 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_02250 PF00583 Acetyltransferase (GNAT) family HYG86_02255 PF01926 50S ribosome-binding GTPase HYG86_02260 PF00004 ATPase family associated with various cellular activities (AAA) HYG86_02260 PF05362 Lon protease (S16) C-terminal proteolytic domain HYG86_02260 PF02190 ATP-dependent protease La (LON) substrate-binding domain HYG86_02265 PF00004 ATPase family associated with various cellular activities (AAA) HYG86_02265 PF05362 Lon protease (S16) C-terminal proteolytic domain HYG86_02270 PF06689 ClpX C4-type zinc finger HYG86_02270 PF07724 AAA domain (Cdc48 subfamily) HYG86_02270 PF10431 C-terminal, D2-small domain, of ClpB protein HYG86_02275 PF00574 Clp protease HYG86_02280 PF05697 Bacterial trigger factor protein (TF) HYG86_02280 PF05698 Bacterial trigger factor protein (TF) C-terminus HYG86_02280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HYG86_02335 PF01725 Ham1 family HYG86_02340 PF03725 3' exoribonuclease family, domain 2 HYG86_02340 PF01138 3' exoribonuclease family, domain 1 HYG86_02375 PF07476 Methylaspartate ammonia-lyase C-terminus HYG86_02375 PF05034 Methylaspartate ammonia-lyase N-terminus HYG86_02380 PF06368 Methylaspartate mutase E chain (MutE) HYG86_02385 PF13941 MutL protein HYG86_02390 PF02310 B12 binding domain HYG86_02395 PF01177 Asp/Glu/Hydantoin racemase HYG86_02400 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HYG86_02405 PF01554 MatE HYG86_02410 PF01047 MarR family HYG86_02415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_02415 PF13426 PAS domain HYG86_02415 PF13188 PAS domain HYG86_02415 PF00989 PAS fold HYG86_02415 PF00512 His Kinase A (phospho-acceptor) domain HYG86_02425 PF08331 Domain of unknown function (DUF1730) HYG86_02430 PF00989 PAS fold HYG86_02430 PF00512 His Kinase A (phospho-acceptor) domain HYG86_02430 PF00672 HAMP domain HYG86_02430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_02430 PF18698 Histidine kinase sensor domain HYG86_02435 PF00072 Response regulator receiver domain HYG86_02435 PF00486 Transcriptional regulatory protein, C terminal HYG86_02440 PF01339 CheB methylesterase HYG86_02440 PF00072 Response regulator receiver domain HYG86_02450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_02450 PF00672 HAMP domain HYG86_02475 PF03965 Penicillinase repressor HYG86_02485 PF02535 ZIP Zinc transporter HYG86_02490 PF01523 Putative modulator of DNA gyrase HYG86_02495 PF01523 Putative modulator of DNA gyrase HYG86_02520 PF01966 HD domain HYG86_02530 PF02568 Thiamine biosynthesis protein (ThiI) HYG86_02530 PF02926 THUMP domain HYG86_02535 PF00266 Aminotransferase class-V HYG86_02555 PF04055 Radical SAM superfamily HYG86_02565 PF00132 Bacterial transferase hexapeptide (six repeats) HYG86_02565 PF12804 MobA-like NTP transferase domain HYG86_02570 PF00512 His Kinase A (phospho-acceptor) domain HYG86_02570 PF00989 PAS fold HYG86_02570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_02570 PF16736 Single Cache-like HYG86_02575 PF00486 Transcriptional regulatory protein, C terminal HYG86_02575 PF00072 Response regulator receiver domain HYG86_02585 PF03956 Lysine exporter LysO HYG86_02605 PF00579 tRNA synthetases class I (W and Y) HYG86_02615 PF07690 Major Facilitator Superfamily HYG86_02620 PF09827 CRISPR associated protein Cas2 HYG86_02625 PF01867 CRISPR associated protein Cas1 HYG86_02635 PF18395 Cas3 C-terminal domain HYG86_02635 PF00270 DEAD/DEAH box helicase HYG86_02635 PF18019 HD domain HYG86_02660 PF00665 Integrase core domain HYG86_02665 PF01695 IstB-like ATP binding protein HYG86_02675 PF17202 Single cache domain 3 HYG86_02675 PF00672 HAMP domain HYG86_02675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_02680 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG86_02680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HYG86_02690 PF00258 Flavodoxin HYG86_02690 PF00753 Metallo-beta-lactamase superfamily HYG86_02690 PF00301 Rubredoxin HYG86_02700 PF03061 Thioesterase superfamily HYG86_02710 PF13378 Enolase C-terminal domain-like HYG86_02710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HYG86_02715 PF02743 Cache domain HYG86_02715 PF00672 HAMP domain HYG86_02715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_02720 PF00672 HAMP domain HYG86_02720 PF02743 Cache domain HYG86_02720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_02730 PF01212 Beta-eliminating lyase HYG86_02740 PF00149 Calcineurin-like phosphoesterase HYG86_02745 PF01966 HD domain HYG86_02745 PF11871 Domain of unknown function (DUF3391) HYG86_02760 PF00534 Glycosyl transferases group 1 HYG86_02760 PF08323 Starch synthase catalytic domain HYG86_02765 PF00483 Nucleotidyl transferase HYG86_02770 PF00483 Nucleotidyl transferase HYG86_02775 PF00291 Pyridoxal-phosphate dependent enzyme HYG86_02780 PF01053 Cys/Met metabolism PLP-dependent enzyme HYG86_02785 PF02664 S-Ribosylhomocysteinase (LuxS) HYG86_02790 PF13649 Methyltransferase domain HYG86_02800 PF03109 ABC1 family HYG86_02810 PF01966 HD domain HYG86_02815 PF17248 Family of unknown function (DUF5317) HYG86_02820 PF02310 B12 binding domain HYG86_02820 PF04055 Radical SAM superfamily HYG86_02835 PF01593 Flavin containing amine oxidoreductase HYG86_02840 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG86_02840 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HYG86_02855 PF03323 Bacillus/Clostridium GerA spore germination protein HYG86_02875 PF07478 D-ala D-ala ligase C-terminus HYG86_02875 PF01820 D-ala D-ala ligase N-terminus HYG86_02895 PF00149 Calcineurin-like phosphoesterase HYG86_02900 PF01554 MatE HYG86_02905 PF06133 Control of competence regulator ComK, YlbF/YmcA HYG86_02910 PF00248 Aldo/keto reductase family HYG86_02915 PF03553 Na+/H+ antiporter family HYG86_02925 PF00156 Phosphoribosyl transferase domain HYG86_02930 PF04055 Radical SAM superfamily HYG86_02935 PF11230 Protein of unknown function (DUF3029) HYG86_02950 PF00664 ABC transporter transmembrane region HYG86_02950 PF00005 ABC transporter HYG86_02955 PF00664 ABC transporter transmembrane region HYG86_02955 PF00005 ABC transporter HYG86_02960 PF02915 Rubrerythrin HYG86_02965 PF02875 Mur ligase family, glutamate ligase domain HYG86_02965 PF08245 Mur ligase middle domain HYG86_02970 PF08245 Mur ligase middle domain HYG86_02970 PF01225 Mur ligase family, catalytic domain HYG86_02970 PF02875 Mur ligase family, glutamate ligase domain HYG86_02975 PF00301 Rubredoxin HYG86_02980 PF03006 Haemolysin-III related HYG86_02990 PF08534 Redoxin HYG86_03000 PF08534 Redoxin HYG86_03010 PF02261 Aspartate decarboxylase HYG86_03015 PF02569 Pantoate-beta-alanine ligase HYG86_03020 PF02548 Ketopantoate hydroxymethyltransferase HYG86_03030 PF11941 Domain of unknown function (DUF3459) HYG86_03030 PF00128 Alpha amylase, catalytic domain HYG86_03035 PF02896 PEP-utilising enzyme, TIM barrel domain HYG86_03035 PF00391 PEP-utilising enzyme, mobile domain HYG86_03035 PF05524 PEP-utilising enzyme, N-terminal HYG86_03040 PF00381 PTS HPr component phosphorylation site HYG86_03045 PF08402 TOBE domain HYG86_03045 PF00005 ABC transporter HYG86_03050 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_03060 PF00924 Mechanosensitive ion channel HYG86_03065 PF01546 Peptidase family M20/M25/M40 HYG86_03065 PF07687 Peptidase dimerisation domain HYG86_03075 PF01554 MatE HYG86_03090 PF02335 Cytochrome c552 HYG86_03095 PF01578 Cytochrome C assembly protein HYG86_03105 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HYG86_03105 PF14572 Phosphoribosyl synthetase-associated domain HYG86_03115 PF00561 alpha/beta hydrolase fold HYG86_03130 PF00583 Acetyltransferase (GNAT) family HYG86_03155 PF13344 Haloacid dehalogenase-like hydrolase HYG86_03155 PF00293 NUDIX domain HYG86_03160 PF01565 FAD binding domain HYG86_03160 PF02913 FAD linked oxidases, C-terminal domain HYG86_03165 PF13237 4Fe-4S dicluster domain HYG86_03165 PF01012 Electron transfer flavoprotein domain HYG86_03165 PF00766 Electron transfer flavoprotein FAD-binding domain HYG86_03170 PF01012 Electron transfer flavoprotein domain HYG86_03175 PF09861 Lactate racemase N-terminal domain HYG86_03180 PF07729 FCD domain HYG86_03180 PF00392 Bacterial regulatory proteins, gntR family HYG86_03185 PF02652 L-lactate permease HYG86_03190 PF00486 Transcriptional regulatory protein, C terminal HYG86_03190 PF00072 Response regulator receiver domain HYG86_03195 PF00512 His Kinase A (phospho-acceptor) domain HYG86_03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_03195 PF00672 HAMP domain HYG86_03200 PF01979 Amidohydrolase family HYG86_03205 PF01979 Amidohydrolase family HYG86_03230 PF07963 Prokaryotic N-terminal methylation motif HYG86_03235 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HYG86_03235 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HYG86_03255 PF12911 N-terminal TM domain of oligopeptide transport permease C HYG86_03255 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_03260 PF00664 ABC transporter transmembrane region HYG86_03260 PF03412 Peptidase C39 family HYG86_03260 PF00005 ABC transporter HYG86_03285 PF00005 ABC transporter HYG86_03285 PF00664 ABC transporter transmembrane region HYG86_03295 PF00664 ABC transporter transmembrane region HYG86_03295 PF00005 ABC transporter HYG86_03305 PF12557 Cob(I)alamin adenosyltransferase N terminal HYG86_03305 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HYG86_03310 PF00005 ABC transporter HYG86_03315 PF01032 FecCD transport family HYG86_03320 PF01497 Periplasmic binding protein HYG86_03325 PF00155 Aminotransferase class I and II HYG86_03330 PF03186 CobD/Cbib protein HYG86_03335 PF07685 CobB/CobQ-like glutamine amidotransferase domain HYG86_03340 PF00300 Histidine phosphatase superfamily (branch 1) HYG86_03340 PF13456 Reverse transcriptase-like HYG86_03345 PF02654 Cobalamin-5-phosphate synthase HYG86_03350 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HYG86_03365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HYG86_03365 PF07685 CobB/CobQ-like glutamine amidotransferase domain HYG86_03370 PF01432 Peptidase family M3 HYG86_03370 PF08439 Oligopeptidase F HYG86_03375 PF02581 Thiamine monophosphate synthase HYG86_03380 PF02110 Hydroxyethylthiazole kinase family HYG86_03385 PF08543 Phosphomethylpyrimidine kinase HYG86_03395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HYG86_03395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HYG86_03400 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HYG86_03400 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HYG86_03405 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HYG86_03405 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HYG86_03410 PF12697 Alpha/beta hydrolase family HYG86_03415 PF02653 Branched-chain amino acid transport system / permease component HYG86_03420 PF02653 Branched-chain amino acid transport system / permease component HYG86_03425 PF00005 ABC transporter HYG86_03430 PF00005 ABC transporter HYG86_03430 PF12399 Branched-chain amino acid ATP-binding cassette transporter HYG86_03445 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HYG86_03445 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HYG86_03450 PF01575 MaoC like domain HYG86_03455 PF00158 Sigma-54 interaction domain HYG86_03455 PF13426 PAS domain HYG86_03455 PF02954 Bacterial regulatory protein, Fis family HYG86_03460 PF00766 Electron transfer flavoprotein FAD-binding domain HYG86_03460 PF01012 Electron transfer flavoprotein domain HYG86_03465 PF01012 Electron transfer flavoprotein domain HYG86_03470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYG86_03470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYG86_03470 PF02770 Acyl-CoA dehydrogenase, middle domain HYG86_03475 PF02803 Thiolase, C-terminal domain HYG86_03475 PF00108 Thiolase, N-terminal domain HYG86_03480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HYG86_03480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HYG86_03485 PF00378 Enoyl-CoA hydratase/isomerase HYG86_03500 PF03551 Transcriptional regulator PadR-like family HYG86_03510 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_03510 PF12911 N-terminal TM domain of oligopeptide transport permease C HYG86_03525 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HYG86_03530 PF00364 Biotin-requiring enzyme HYG86_03540 PF01039 Carboxyl transferase domain HYG86_03555 PF01642 Methylmalonyl-CoA mutase HYG86_03555 PF02310 B12 binding domain HYG86_03560 PF02310 B12 binding domain HYG86_03560 PF01642 Methylmalonyl-CoA mutase HYG86_03570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYG86_03575 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HYG86_03575 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HYG86_03575 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HYG86_03595 PF00293 NUDIX domain HYG86_03605 PF00209 Sodium:neurotransmitter symporter family HYG86_03610 PF08668 HDOD domain HYG86_03610 PF00563 EAL domain HYG86_03620 PF10091 Putative glucoamylase HYG86_03620 PF06165 Glycosyltransferase family 36 HYG86_03620 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HYG86_03625 PF00483 Nucleotidyl transferase HYG86_03650 PF00325 Bacterial regulatory proteins, crp family HYG86_03650 PF00027 Cyclic nucleotide-binding domain HYG86_03655 PF01814 Hemerythrin HHE cation binding domain HYG86_03655 PF04405 Domain of Unknown function (DUF542) HYG86_03665 PF02906 Iron only hydrogenase large subunit, C-terminal domain HYG86_03665 PF02256 Iron hydrogenase small subunit HYG86_03665 PF00037 4Fe-4S binding domain HYG86_03665 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HYG86_03670 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HYG86_03670 PF00037 4Fe-4S binding domain HYG86_03670 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HYG86_03690 PF00005 ABC transporter HYG86_03720 PF00107 Zinc-binding dehydrogenase HYG86_03720 PF08240 Alcohol dehydrogenase GroES-like domain HYG86_03720 PF13823 Alcohol dehydrogenase GroES-associated HYG86_03725 PF02028 BCCT, betaine/carnitine/choline family transporter HYG86_03735 PF01370 NAD dependent epimerase/dehydratase family HYG86_03740 PF01047 MarR family HYG86_03745 PF02096 60Kd inner membrane protein HYG86_03760 PF00005 ABC transporter HYG86_03765 PF01641 SelR domain HYG86_03780 PF00005 ABC transporter HYG86_03790 PF03590 Aspartate-ammonia ligase HYG86_03795 PF02915 Rubrerythrin HYG86_03815 PF03358 NADPH-dependent FMN reductase HYG86_03815 PF00890 FAD binding domain HYG86_03815 PF04205 FMN-binding domain HYG86_03820 PF00196 Bacterial regulatory proteins, luxR family HYG86_03820 PF00072 Response regulator receiver domain HYG86_03825 PF00672 HAMP domain HYG86_03825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_03825 PF07730 Histidine kinase HYG86_03830 PF00890 FAD binding domain HYG86_03830 PF14537 Cytochrome c3 HYG86_03835 PF02557 D-alanyl-D-alanine carboxypeptidase HYG86_03840 PF00672 HAMP domain HYG86_03840 PF13426 PAS domain HYG86_03840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_03845 PF00583 Acetyltransferase (GNAT) family HYG86_03850 PF00005 ABC transporter HYG86_03850 PF12848 ABC transporter HYG86_03875 PF08264 Anticodon-binding domain of tRNA HYG86_03875 PF00133 tRNA synthetases class I (I, L, M and V) HYG86_03900 PF02378 Phosphotransferase system, EIIC HYG86_03910 PF02378 Phosphotransferase system, EIIC HYG86_03915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HYG86_03925 PF02896 PEP-utilising enzyme, TIM barrel domain HYG86_03925 PF05524 PEP-utilising enzyme, N-terminal HYG86_03925 PF00391 PEP-utilising enzyme, mobile domain HYG86_03930 PF00381 PTS HPr component phosphorylation site HYG86_03940 PF02378 Phosphotransferase system, EIIC HYG86_03945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HYG86_03950 PF00158 Sigma-54 interaction domain HYG86_03950 PF03610 PTS system fructose IIA component HYG86_03950 PF00874 PRD domain HYG86_03950 PF00874 PRD domain HYG86_03950 PF00158 Sigma-54 interaction domain HYG86_03950 PF03610 PTS system fructose IIA component HYG86_03955 PF02056 Family 4 glycosyl hydrolase HYG86_03955 PF11975 Family 4 glycosyl hydrolase C-terminal domain HYG86_03960 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HYG86_03965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HYG86_03970 PF11975 Family 4 glycosyl hydrolase C-terminal domain HYG86_03970 PF02056 Family 4 glycosyl hydrolase HYG86_03985 PF01869 BadF/BadG/BcrA/BcrD ATPase family HYG86_03995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HYG86_03995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HYG86_04015 PF13237 4Fe-4S dicluster domain HYG86_04015 PF13375 RnfC Barrel sandwich hybrid domain HYG86_04015 PF10531 SLBB domain HYG86_04015 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HYG86_04020 PF00171 Aldehyde dehydrogenase family HYG86_04025 PF01923 Cobalamin adenosyltransferase HYG86_04030 PF03319 Ethanolamine utilisation protein EutN/carboxysome HYG86_04045 PF06130 Phosphate propanoyltransferase HYG86_04050 PF00936 BMC domain HYG86_04055 PF00936 BMC domain HYG86_04065 PF18427 DD-reactivating factor swiveling domain HYG86_04065 PF08841 Diol dehydratase reactivase ATPase-like domain HYG86_04070 PF02287 Dehydratase small subunit HYG86_04075 PF02288 Dehydratase medium subunit HYG86_04080 PF02286 Dehydratase large subunit HYG86_04085 PF00936 BMC domain HYG86_04090 PF00936 BMC domain HYG86_04095 PF00072 Response regulator receiver domain HYG86_04095 PF12833 Helix-turn-helix domain HYG86_04100 PF02743 Cache domain HYG86_04100 PF00672 HAMP domain HYG86_04100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_04100 PF06580 Histidine kinase HYG86_04120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYG86_04120 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG86_04145 PF02653 Branched-chain amino acid transport system / permease component HYG86_04150 PF00005 ABC transporter HYG86_04155 PF12683 Protein of unknown function (DUF3798) HYG86_04160 PF02653 Branched-chain amino acid transport system / permease component HYG86_04165 PF00005 ABC transporter HYG86_04170 PF13407 Periplasmic binding protein domain HYG86_04175 PF13407 Periplasmic binding protein domain HYG86_04180 PF12833 Helix-turn-helix domain HYG86_04180 PF00072 Response regulator receiver domain HYG86_04185 PF06580 Histidine kinase HYG86_04185 PF07694 5TMR of 5TMR-LYT HYG86_04185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_04210 PF05223 NTF2-like N-terminal transpeptidase domain HYG86_04210 PF03717 Penicillin-binding Protein dimerisation domain HYG86_04210 PF00905 Penicillin binding protein transpeptidase domain HYG86_04220 PF00534 Glycosyl transferases group 1 HYG86_04220 PF13477 Glycosyl transferase 4-like HYG86_04240 PF03471 Transporter associated domain HYG86_04240 PF01595 Cyclin M transmembrane N-terminal domain HYG86_04240 PF00571 CBS domain HYG86_04255 PF00005 ABC transporter HYG86_04260 PF07702 UTRA domain HYG86_04260 PF00392 Bacterial regulatory proteins, gntR family HYG86_04265 PF01624 MutS domain I HYG86_04265 PF05188 MutS domain II HYG86_04265 PF05192 MutS domain III HYG86_04265 PF05190 MutS family domain IV HYG86_04265 PF00488 MutS domain V HYG86_04270 PF00480 ROK family HYG86_04275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYG86_04275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HYG86_04275 PF02824 TGS domain HYG86_04275 PF03129 Anticodon binding domain HYG86_04285 PF00313 'Cold-shock' DNA-binding domain HYG86_04290 PF00313 'Cold-shock' DNA-binding domain HYG86_04295 PF14602 Hexapeptide repeat of succinyl-transferase HYG86_04295 PF12464 Maltose acetyltransferase HYG86_04300 PF03123 CAT RNA binding domain HYG86_04300 PF00874 PRD domain HYG86_04305 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HYG86_04305 PF00367 phosphotransferase system, EIIB HYG86_04305 PF02378 Phosphotransferase system, EIIC HYG86_04310 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HYG86_04315 PF06153 Cyclic-di-AMP receptor HYG86_04330 PF01418 Helix-turn-helix domain, rpiR family HYG86_04330 PF01380 SIS domain HYG86_04335 PF00232 Glycosyl hydrolase family 1 HYG86_04340 PF02378 Phosphotransferase system, EIIC HYG86_04350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HYG86_04355 PF04542 Sigma-70 region 2 HYG86_04355 PF08281 Sigma-70, region 4 HYG86_04365 PF06445 GyrI-like small molecule binding domain HYG86_04365 PF12833 Helix-turn-helix domain HYG86_04400 PF00149 Calcineurin-like phosphoesterase HYG86_04415 PF00672 HAMP domain HYG86_04415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_04415 PF18698 Histidine kinase sensor domain HYG86_04415 PF00512 His Kinase A (phospho-acceptor) domain HYG86_04415 PF00989 PAS fold HYG86_04420 PF00072 Response regulator receiver domain HYG86_04420 PF00486 Transcriptional regulatory protein, C terminal HYG86_04430 PF00665 Integrase core domain HYG86_04430 PF13276 HTH-like domain HYG86_04430 PF13333 Integrase core domain HYG86_04435 PF00872 Transposase, Mutator family HYG86_04450 PF00989 PAS fold HYG86_04450 PF00512 His Kinase A (phospho-acceptor) domain HYG86_04450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_04450 PF16736 Single Cache-like HYG86_04455 PF00072 Response regulator receiver domain HYG86_04455 PF00486 Transcriptional regulatory protein, C terminal HYG86_04485 PF04434 SWIM zinc finger HYG86_04490 PF00176 SNF2 family N-terminal domain HYG86_04490 PF12419 SNF2 Helicase protein HYG86_04490 PF00271 Helicase conserved C-terminal domain HYG86_04495 PF13690 Chemotaxis phosphatase CheX HYG86_04525 PF00271 Helicase conserved C-terminal domain HYG86_04525 PF00270 DEAD/DEAH box helicase HYG86_04530 PF00872 Transposase, Mutator family HYG86_04550 PF00270 DEAD/DEAH box helicase HYG86_04550 PF00271 Helicase conserved C-terminal domain HYG86_04560 PF00872 Transposase, Mutator family HYG86_04575 PF00270 DEAD/DEAH box helicase HYG86_04575 PF00271 Helicase conserved C-terminal domain HYG86_04580 PF01555 DNA methylase HYG86_04585 PF13086 AAA domain HYG86_04585 PF13087 AAA domain HYG86_04585 PF13195 Protein of unknown function (DUF4011) HYG86_04590 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HYG86_04590 PF18766 SWI2/SNF2 ATPase HYG86_04590 PF11867 Domain of unknown function (DUF3387) HYG86_04595 PF01420 Type I restriction modification DNA specificity domain HYG86_04615 PF00005 ABC transporter HYG86_04620 PF04851 Type III restriction enzyme, res subunit HYG86_04620 PF08774 VRR-NUC domain HYG86_04625 PF01555 DNA methylase HYG86_04625 PF18273 Type III R-M EcoP15I C-terminal domain HYG86_04675 PF00476 DNA polymerase family A HYG86_04675 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HYG86_04675 PF01367 5'-3' exonuclease, C-terminal SAM fold HYG86_04675 PF01612 3'-5' exonuclease HYG86_04735 PF02773 S-adenosylmethionine synthetase, C-terminal domain HYG86_04735 PF02772 S-adenosylmethionine synthetase, central domain HYG86_04735 PF00438 S-adenosylmethionine synthetase, N-terminal domain HYG86_04740 PF01555 DNA methylase HYG86_04770 PF03354 Phage Terminase HYG86_04775 PF04860 Phage portal protein HYG86_04840 PF05105 Bacteriophage holin family HYG86_04860 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HYG86_04860 PF01348 Type II intron maturase HYG86_04885 PF02796 Helix-turn-helix domain of resolvase HYG86_04885 PF00239 Resolvase, N terminal domain HYG86_04895 PF01043 SecA preprotein cross-linking domain HYG86_04895 PF07516 SecA Wing and Scaffold domain HYG86_04895 PF02810 SEC-C motif HYG86_04895 PF07517 SecA DEAD-like domain HYG86_04920 PF03793 PASTA domain HYG86_04920 PF00069 Protein kinase domain HYG86_04970 PF00583 Acetyltransferase (GNAT) family HYG86_04990 PF01979 Amidohydrolase family HYG86_04995 PF01636 Phosphotransferase enzyme family HYG86_05000 PF00155 Aminotransferase class I and II HYG86_05000 PF00392 Bacterial regulatory proteins, gntR family HYG86_05030 PF08264 Anticodon-binding domain of tRNA HYG86_05030 PF09334 tRNA synthetases class I (M) HYG86_05035 PF12323 Helix-turn-helix domain HYG86_05035 PF01385 Probable transposase HYG86_05035 PF07282 Putative transposase DNA-binding domain HYG86_05055 PF00376 MerR family regulatory protein HYG86_05055 PF09278 MerR, DNA binding HYG86_05075 PF06445 GyrI-like small molecule binding domain HYG86_05075 PF12833 Helix-turn-helix domain HYG86_05090 PF00293 NUDIX domain HYG86_05095 PF13630 SdpI/YhfL protein family HYG86_05120 PF03551 Transcriptional regulator PadR-like family HYG86_05125 PF12848 ABC transporter HYG86_05125 PF00005 ABC transporter HYG86_05135 PF02743 Cache domain HYG86_05135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_05135 PF00672 HAMP domain HYG86_05145 PF08818 Domain of unknown function (DU1801) HYG86_05155 PF00005 ABC transporter HYG86_05155 PF13732 Domain of unknown function (DUF4162) HYG86_05180 PF01909 Nucleotidyltransferase domain HYG86_05180 PF13427 Domain of unknown function (DUF4111) HYG86_05195 PF04542 Sigma-70 region 2 HYG86_05195 PF08281 Sigma-70, region 4 HYG86_05205 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HYG86_05210 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HYG86_05220 PF00884 Sulfatase HYG86_05280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG86_05280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG86_05285 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HYG86_05285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HYG86_05290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HYG86_05320 PF02645 Uncharacterised protein, DegV family COG1307 HYG86_05355 PF00271 Helicase conserved C-terminal domain HYG86_05355 PF03880 DbpA RNA binding domain HYG86_05355 PF00270 DEAD/DEAH box helicase HYG86_05365 PF13732 Domain of unknown function (DUF4162) HYG86_05365 PF00005 ABC transporter HYG86_05370 PF00465 Iron-containing alcohol dehydrogenase HYG86_05375 PF01476 LysM domain HYG86_05375 PF05257 CHAP domain HYG86_05390 PF00005 ABC transporter HYG86_05395 PF01032 FecCD transport family HYG86_05400 PF01032 FecCD transport family HYG86_05405 PF01497 Periplasmic binding protein HYG86_05450 PF13443 Cro/C1-type HTH DNA-binding domain HYG86_05465 PF04229 GrpB protein HYG86_05475 PF06445 GyrI-like small molecule binding domain HYG86_05475 PF12833 Helix-turn-helix domain HYG86_05480 PF13426 PAS domain HYG86_05480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_05480 PF00672 HAMP domain HYG86_05495 PF00578 AhpC/TSA family HYG86_05500 PF13192 Thioredoxin domain HYG86_05500 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG86_05505 PF00805 Pentapeptide repeats (8 copies) HYG86_05520 PF03358 NADPH-dependent FMN reductase HYG86_05520 PF04205 FMN-binding domain HYG86_05520 PF00890 FAD binding domain HYG86_05525 PF08359 YsiA-like protein, C-terminal region HYG86_05525 PF00440 Bacterial regulatory proteins, tetR family HYG86_05550 PF00005 ABC transporter HYG86_05555 PF01032 FecCD transport family HYG86_05565 PF02492 CobW/HypB/UreG, nucleotide-binding domain HYG86_05570 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HYG86_05580 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HYG86_05580 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HYG86_05580 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG86_05585 PF01593 Flavin containing amine oxidoreductase HYG86_05595 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HYG86_05605 PF13416 Bacterial extracellular solute-binding protein HYG86_05610 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_05615 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_05620 PF00005 ABC transporter HYG86_05620 PF08402 TOBE domain HYG86_05645 PF04229 GrpB protein HYG86_05650 PF01212 Beta-eliminating lyase HYG86_05655 PF00158 Sigma-54 interaction domain HYG86_05655 PF13426 PAS domain HYG86_05655 PF02954 Bacterial regulatory protein, Fis family HYG86_05675 PF00583 Acetyltransferase (GNAT) family HYG86_05680 PF01026 TatD related DNase HYG86_05685 PF13280 WYL domain HYG86_05685 PF08279 HTH domain HYG86_05695 PF00005 ABC transporter HYG86_05710 PF01276 Orn/Lys/Arg decarboxylase, major domain HYG86_05710 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HYG86_05790 PF00872 Transposase, Mutator family HYG86_05830 PF00512 His Kinase A (phospho-acceptor) domain HYG86_05830 PF00672 HAMP domain HYG86_05830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_05830 PF18698 Histidine kinase sensor domain HYG86_05830 PF00989 PAS fold HYG86_05835 PF00072 Response regulator receiver domain HYG86_05835 PF00486 Transcriptional regulatory protein, C terminal HYG86_05840 PF00005 ABC transporter HYG86_05845 PF02687 FtsX-like permease family HYG86_05845 PF12704 MacB-like periplasmic core domain HYG86_05855 PF00155 Aminotransferase class I and II HYG86_05860 PF00375 Sodium:dicarboxylate symporter family HYG86_05865 PF00158 Sigma-54 interaction domain HYG86_05865 PF13426 PAS domain HYG86_05865 PF02954 Bacterial regulatory protein, Fis family HYG86_05870 PF01053 Cys/Met metabolism PLP-dependent enzyme HYG86_05875 PF01381 Helix-turn-helix HYG86_05915 PF01048 Phosphorylase superfamily HYG86_05925 PF01202 Shikimate kinase HYG86_06020 PF01695 IstB-like ATP binding protein HYG86_06030 PF00589 Phage integrase family HYG86_06035 PF02899 Phage integrase, N-terminal SAM-like domain HYG86_06035 PF00589 Phage integrase family HYG86_06040 PF00589 Phage integrase family HYG86_06040 PF02899 Phage integrase, N-terminal SAM-like domain HYG86_06125 PF01668 SmpB protein HYG86_06130 PF00773 RNB domain HYG86_06130 PF08206 Ribonuclease B OB domain HYG86_06130 PF17876 Cold shock domain HYG86_06130 PF00575 S1 RNA binding domain HYG86_06145 PF00484 Carbonic anhydrase HYG86_06150 PF12146 Serine aminopeptidase, S33 HYG86_06155 PF03030 Inorganic H+ pyrophosphatase HYG86_06160 PF03840 Preprotein translocase SecG subunit HYG86_06175 PF00113 Enolase, C-terminal TIM barrel domain HYG86_06175 PF03952 Enolase, N-terminal domain HYG86_06180 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HYG86_06180 PF01676 Metalloenzyme superfamily HYG86_06185 PF00121 Triosephosphate isomerase HYG86_06190 PF00162 Phosphoglycerate kinase HYG86_06195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HYG86_06195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HYG86_06200 PF04198 Putative sugar-binding domain HYG86_06210 PF04963 Sigma-54 factor, core binding domain HYG86_06210 PF04552 Sigma-54, DNA binding domain HYG86_06210 PF00309 Sigma-54 factor, Activator interacting domain (AID) HYG86_06215 PF01197 Ribosomal protein L31 HYG86_06220 PF10298 WhiA N-terminal LAGLIDADG-like domain HYG86_06220 PF14527 WhiA LAGLIDADG-like domain HYG86_06220 PF02650 WhiA C-terminal HTH domain HYG86_06225 PF01933 Uncharacterised protein family UPF0052 HYG86_06230 PF03668 P-loop ATPase protein family HYG86_06235 PF02811 PHP domain HYG86_06240 PF00480 ROK family HYG86_06245 PF02811 PHP domain HYG86_06260 PF02645 Uncharacterised protein, DegV family COG1307 HYG86_06270 PF00005 ABC transporter HYG86_06275 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_06280 PF00085 Thioredoxin HYG86_06285 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG86_06295 PF01547 Bacterial extracellular solute-binding protein HYG86_06305 PF00571 CBS domain HYG86_06305 PF01368 DHH family HYG86_06305 PF02833 DHHA2 domain HYG86_06305 PF07085 DRTGG domain HYG86_06315 PF13439 Glycosyltransferase Family 4 HYG86_06315 PF00534 Glycosyl transferases group 1 HYG86_06320 PF02585 GlcNAc-PI de-N-acetylase HYG86_06325 PF10079 Bacillithiol biosynthesis BshC HYG86_06335 PF13333 Integrase core domain HYG86_06335 PF00665 Integrase core domain HYG86_06335 PF13276 HTH-like domain HYG86_06340 PF01070 FMN-dependent dehydrogenase HYG86_06345 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV HYG86_06355 PF00188 Cysteine-rich secretory protein family HYG86_06365 PF00196 Bacterial regulatory proteins, luxR family HYG86_06385 PF03649 Uncharacterised protein family (UPF0014) HYG86_06390 PF00005 ABC transporter HYG86_06395 PF00005 ABC transporter HYG86_06395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG86_06400 PF00005 ABC transporter HYG86_06400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG86_06405 PF12911 N-terminal TM domain of oligopeptide transport permease C HYG86_06405 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_06410 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_06415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HYG86_06425 PF00005 ABC transporter HYG86_06425 PF00664 ABC transporter transmembrane region HYG86_06430 PF00664 ABC transporter transmembrane region HYG86_06430 PF00005 ABC transporter HYG86_06465 PF02151 UvrB/uvrC motif HYG86_06465 PF08459 UvrC Helix-hairpin-helix N-terminal HYG86_06465 PF01541 GIY-YIG catalytic domain HYG86_06465 PF12826 Helix-hairpin-helix motif HYG86_06470 PF17755 UvrA DNA-binding domain HYG86_06470 PF17760 UvrA interaction domain HYG86_06475 PF00271 Helicase conserved C-terminal domain HYG86_06475 PF04851 Type III restriction enzyme, res subunit HYG86_06475 PF02151 UvrB/uvrC motif HYG86_06475 PF17757 UvrB interaction domain HYG86_06475 PF12344 Ultra-violet resistance protein B HYG86_06485 PF17820 PDZ domain HYG86_06485 PF03572 Peptidase family S41 HYG86_06485 PF01471 Putative peptidoglycan binding domain HYG86_06490 PF01551 Peptidase family M23 HYG86_06490 PF10145 Phage-related minor tail protein HYG86_06490 PF01464 Transglycosylase SLT domain HYG86_06495 PF02687 FtsX-like permease family HYG86_06495 PF18075 FtsX extracellular domain HYG86_06500 PF00005 ABC transporter HYG86_06505 PF02632 BioY family HYG86_06510 PF03099 Biotin/lipoate A/B protein ligase family HYG86_06510 PF02237 Biotin protein ligase C terminal domain HYG86_06510 PF08279 HTH domain HYG86_06520 PF02779 Transketolase, pyrimidine binding domain HYG86_06520 PF02780 Transketolase, C-terminal domain HYG86_06525 PF00456 Transketolase, thiamine diphosphate binding domain HYG86_06530 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HYG86_06530 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HYG86_06545 PF07516 SecA Wing and Scaffold domain HYG86_06545 PF01043 SecA preprotein cross-linking domain HYG86_06545 PF07517 SecA DEAD-like domain HYG86_06545 PF02810 SEC-C motif HYG86_06550 PF12804 MobA-like NTP transferase domain HYG86_06555 PF04024 PspC domain HYG86_06565 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HYG86_06565 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HYG86_06570 PF00672 HAMP domain HYG86_06570 PF02743 Cache domain HYG86_06570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_06580 PF13439 Glycosyltransferase Family 4 HYG86_06580 PF00534 Glycosyl transferases group 1 HYG86_06585 PF00535 Glycosyl transferase family 2 HYG86_06585 PF13181 Tetratricopeptide repeat HYG86_06595 PF00700 Bacterial flagellin C-terminal helical region HYG86_06595 PF00669 Bacterial flagellin N-terminal helical region HYG86_06600 PF00700 Bacterial flagellin C-terminal helical region HYG86_06600 PF00669 Bacterial flagellin N-terminal helical region HYG86_06610 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HYG86_06610 PF02222 ATP-grasp domain HYG86_06615 PF00731 AIR carboxylase HYG86_06625 PF02465 Flagellar hook-associated protein 2 N-terminus HYG86_06625 PF07195 Flagellar hook-associated protein 2 C-terminus HYG86_06625 PF07196 Flagellin hook IN motif HYG86_06630 PF03646 FlaG protein HYG86_06640 PF02599 Global regulator protein family HYG86_06645 PF02623 FliW protein HYG86_06650 PF00669 Bacterial flagellin N-terminal helical region HYG86_06655 PF00460 Flagella basal body rod protein HYG86_06655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYG86_06665 PF04316 Anti-sigma-28 factor, FlgM HYG86_06680 PF01522 Polysaccharide deacetylase HYG86_06700 PF00990 Diguanylate cyclase, GGDEF domain HYG86_06705 PF01966 HD domain HYG86_06710 PF00535 Glycosyl transferase family 2 HYG86_06715 PF00196 Bacterial regulatory proteins, luxR family HYG86_06715 PF00072 Response regulator receiver domain HYG86_06720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_06720 PF05384 Sensor protein DegS HYG86_06720 PF07730 Histidine kinase HYG86_06725 PF00438 S-adenosylmethionine synthetase, N-terminal domain HYG86_06725 PF02772 S-adenosylmethionine synthetase, central domain HYG86_06725 PF02773 S-adenosylmethionine synthetase, C-terminal domain HYG86_06735 PF01926 50S ribosome-binding GTPase HYG86_06735 PF01018 GTP1/OBG HYG86_06740 PF04284 Protein of unknown function (DUF441) HYG86_06750 PF01546 Peptidase family M20/M25/M40 HYG86_06750 PF07687 Peptidase dimerisation domain HYG86_06755 PF02915 Rubrerythrin HYG86_06760 PF02915 Rubrerythrin HYG86_06785 PF03845 Spore germination protein HYG86_06790 PF03323 Bacillus/Clostridium GerA spore germination protein HYG86_06795 PF00781 Diacylglycerol kinase catalytic domain HYG86_06810 PF03323 Bacillus/Clostridium GerA spore germination protein HYG86_06820 PF00005 ABC transporter HYG86_06825 PF00950 ABC 3 transport family HYG86_06850 PF03845 Spore germination protein HYG86_06860 PF05504 Spore germination B3/ GerAC like, C-terminal HYG86_06865 PF03323 Bacillus/Clostridium GerA spore germination protein HYG86_06870 PF00155 Aminotransferase class I and II HYG86_06875 PF01678 Diaminopimelate epimerase HYG86_06880 PF01432 Peptidase family M3 HYG86_06880 PF08439 Oligopeptidase F HYG86_06885 PF00301 Rubredoxin HYG86_06900 PF00005 ABC transporter HYG86_06910 PF00486 Transcriptional regulatory protein, C terminal HYG86_06910 PF00072 Response regulator receiver domain HYG86_06915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_06915 PF00512 His Kinase A (phospho-acceptor) domain HYG86_06915 PF00989 PAS fold HYG86_06915 PF00672 HAMP domain HYG86_06925 PF00571 CBS domain HYG86_06925 PF01743 Poly A polymerase head domain HYG86_06935 PF01565 FAD binding domain HYG86_06935 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HYG86_06945 PF00924 Mechanosensitive ion channel HYG86_06950 PF17746 SfsA N-terminal OB domain HYG86_06950 PF03749 Sugar fermentation stimulation protein RE domain HYG86_06960 PF00005 ABC transporter HYG86_06960 PF16326 ABC transporter C-terminal domain HYG86_06960 PF12848 ABC transporter HYG86_06970 PF00534 Glycosyl transferases group 1 HYG86_06970 PF13439 Glycosyltransferase Family 4 HYG86_06990 PF01048 Phosphorylase superfamily HYG86_06995 PF01225 Mur ligase family, catalytic domain HYG86_06995 PF02875 Mur ligase family, glutamate ligase domain HYG86_06995 PF08245 Mur ligase middle domain HYG86_07000 PF00814 Glycoprotease family HYG86_07005 PF00583 Acetyltransferase (GNAT) family HYG86_07010 PF00814 Glycoprotease family HYG86_07015 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HYG86_07030 PF13941 MutL protein HYG86_07065 PF00082 Subtilase family HYG86_07070 PF03193 RsgA GTPase HYG86_07075 PF00300 Histidine phosphatase superfamily (branch 1) HYG86_07095 PF07969 Amidohydrolase family HYG86_07100 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HYG86_07110 PF17674 HHH domain HYG86_07110 PF00575 S1 RNA binding domain HYG86_07110 PF09371 Tex-like protein N-terminal domain HYG86_07110 PF16921 Tex protein YqgF-like domain HYG86_07115 PF04015 Domain of unknown function (DUF362) HYG86_07130 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HYG86_07135 PF01402 Ribbon-helix-helix protein, copG family HYG86_07140 PF00842 Alanine racemase, C-terminal domain HYG86_07140 PF01168 Alanine racemase, N-terminal domain HYG86_07150 PF00571 CBS domain HYG86_07150 PF01368 DHH family HYG86_07150 PF02272 DHHA1 domain HYG86_07150 PF01743 Poly A polymerase head domain HYG86_07155 PF01256 Carbohydrate kinase HYG86_07155 PF03853 YjeF-related protein N-terminus HYG86_07160 PF01648 4'-phosphopantetheinyl transferase superfamily HYG86_07170 PF00326 Prolyl oligopeptidase family HYG86_07170 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HYG86_07175 PF12848 ABC transporter HYG86_07175 PF16326 ABC transporter C-terminal domain HYG86_07175 PF00005 ABC transporter HYG86_07185 PF02421 Ferrous iron transport protein B HYG86_07185 PF17910 FeoB cytosolic helical domain HYG86_07185 PF07670 Nucleoside recognition HYG86_07185 PF07664 Ferrous iron transport protein B C terminus HYG86_07190 PF01261 Xylose isomerase-like TIM barrel HYG86_07195 PF00733 Asparagine synthase HYG86_07195 PF13537 Glutamine amidotransferase domain HYG86_07205 PF01979 Amidohydrolase family HYG86_07210 PF04951 D-aminopeptidase HYG86_07215 PF00005 ABC transporter HYG86_07215 PF02687 FtsX-like permease family HYG86_07215 PF12704 MacB-like periplasmic core domain HYG86_07220 PF00005 ABC transporter HYG86_07230 PF04542 Sigma-70 region 2 HYG86_07230 PF08281 Sigma-70, region 4 HYG86_07235 PF01522 Polysaccharide deacetylase HYG86_07240 PF00248 Aldo/keto reductase family HYG86_07245 PF00474 Sodium:solute symporter family HYG86_07250 PF02557 D-alanyl-D-alanine carboxypeptidase HYG86_07260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_07260 PF00512 His Kinase A (phospho-acceptor) domain HYG86_07280 PF00437 Type II/IV secretion system protein HYG86_07285 PF00072 Response regulator receiver domain HYG86_07285 PF00196 Bacterial regulatory proteins, luxR family HYG86_07290 PF00072 Response regulator receiver domain HYG86_07290 PF00196 Bacterial regulatory proteins, luxR family HYG86_07320 PF00196 Bacterial regulatory proteins, luxR family HYG86_07320 PF00072 Response regulator receiver domain HYG86_07325 PF05384 Sensor protein DegS HYG86_07325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_07325 PF07730 Histidine kinase HYG86_07335 PF02595 Glycerate kinase family HYG86_07340 PF00664 ABC transporter transmembrane region HYG86_07340 PF00005 ABC transporter HYG86_07345 PF00005 ABC transporter HYG86_07345 PF00664 ABC transporter transmembrane region HYG86_07365 PF05195 Aminopeptidase P, N-terminal domain HYG86_07365 PF00557 Metallopeptidase family M24 HYG86_07370 PF00300 Histidine phosphatase superfamily (branch 1) HYG86_07385 PF03062 MBOAT, membrane-bound O-acyltransferase family HYG86_07405 PF12146 Serine aminopeptidase, S33 HYG86_07410 PF01451 Low molecular weight phosphotyrosine protein phosphatase HYG86_07430 PF02954 Bacterial regulatory protein, Fis family HYG86_07430 PF00072 Response regulator receiver domain HYG86_07430 PF00158 Sigma-54 interaction domain HYG86_07440 PF04324 BFD-like [2Fe-2S] binding domain HYG86_07440 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG86_07445 PF01266 FAD dependent oxidoreductase HYG86_07445 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HYG86_07450 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG86_07450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG86_07465 PF04309 Glycerol-3-phosphate responsive antiterminator HYG86_07470 PF00403 Heavy-metal-associated domain HYG86_07475 PF01022 Bacterial regulatory protein, arsR family HYG86_07515 PF00480 ROK family HYG86_07520 PF00232 Glycosyl hydrolase family 1 HYG86_07525 PF04794 YdjC-like protein HYG86_07530 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HYG86_07535 PF11975 Family 4 glycosyl hydrolase C-terminal domain HYG86_07535 PF02056 Family 4 glycosyl hydrolase HYG86_07545 PF02378 Phosphotransferase system, EIIC HYG86_07550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HYG86_07555 PF00158 Sigma-54 interaction domain HYG86_07555 PF03610 PTS system fructose IIA component HYG86_07555 PF00874 PRD domain HYG86_07560 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HYG86_07560 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HYG86_07565 PF07670 Nucleoside recognition HYG86_07570 PF07670 Nucleoside recognition HYG86_07575 PF17676 LD-carboxypeptidase C-terminal domain HYG86_07575 PF02016 LD-carboxypeptidase N-terminal domain HYG86_07580 PF01546 Peptidase family M20/M25/M40 HYG86_07580 PF07687 Peptidase dimerisation domain HYG86_07585 PF01386 Ribosomal L25p family HYG86_07585 PF14693 Ribosomal protein TL5, C-terminal domain HYG86_07590 PF01238 Phosphomannose isomerase type I HYG86_07595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG86_07595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG86_07605 PF01595 Cyclin M transmembrane N-terminal domain HYG86_07605 PF03471 Transporter associated domain HYG86_07605 PF00571 CBS domain HYG86_07620 PF00037 4Fe-4S binding domain HYG86_07620 PF02256 Iron hydrogenase small subunit HYG86_07620 PF02906 Iron only hydrogenase large subunit, C-terminal domain HYG86_07620 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HYG86_07625 PF07739 TipAS antibiotic-recognition domain HYG86_07625 PF13411 MerR HTH family regulatory protein HYG86_07635 PF01047 MarR family HYG86_07640 PF03193 RsgA GTPase HYG86_07655 PF00005 ABC transporter HYG86_07655 PF02687 FtsX-like permease family HYG86_07655 PF12704 MacB-like periplasmic core domain HYG86_07690 PF03063 Prismane/CO dehydrogenase family HYG86_07705 PF02810 SEC-C motif HYG86_07705 PF01043 SecA preprotein cross-linking domain HYG86_07705 PF07517 SecA DEAD-like domain HYG86_07705 PF07516 SecA Wing and Scaffold domain HYG86_07720 PF01479 S4 domain HYG86_07720 PF00849 RNA pseudouridylate synthase HYG86_07730 PF00144 Beta-lactamase HYG86_07740 PF00149 Calcineurin-like phosphoesterase HYG86_07750 PF03591 AzlC protein HYG86_07765 PF00005 ABC transporter HYG86_07770 PF01235 Sodium:alanine symporter family HYG86_07775 PF01546 Peptidase family M20/M25/M40 HYG86_07775 PF07687 Peptidase dimerisation domain HYG86_07780 PF00158 Sigma-54 interaction domain HYG86_07790 PF08331 Domain of unknown function (DUF1730) HYG86_07800 PF03553 Na+/H+ antiporter family HYG86_07815 PF00989 PAS fold HYG86_07815 PF13188 PAS domain HYG86_07815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_07815 PF13426 PAS domain HYG86_07815 PF00512 His Kinase A (phospho-acceptor) domain HYG86_07825 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HYG86_07825 PF08666 SAF domain HYG86_07830 PF08666 SAF domain HYG86_07845 PF00005 ABC transporter HYG86_07850 PF00155 Aminotransferase class I and II HYG86_07855 PF01053 Cys/Met metabolism PLP-dependent enzyme HYG86_07860 PF01321 Creatinase/Prolidase N-terminal domain HYG86_07860 PF00557 Metallopeptidase family M24 HYG86_07865 PF03480 Bacterial extracellular solute-binding protein, family 7 HYG86_07870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HYG86_07875 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HYG86_07880 PF07687 Peptidase dimerisation domain HYG86_07880 PF01546 Peptidase family M20/M25/M40 HYG86_07885 PF01614 Bacterial transcriptional regulator HYG86_07885 PF09339 IclR helix-turn-helix domain HYG86_07890 PF01116 Fructose-bisphosphate aldolase class-II HYG86_07895 PF00474 Sodium:solute symporter family HYG86_07900 PF00512 His Kinase A (phospho-acceptor) domain HYG86_07900 PF13188 PAS domain HYG86_07900 PF08448 PAS fold HYG86_07900 PF00072 Response regulator receiver domain HYG86_07900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_07910 PF01385 Probable transposase HYG86_07910 PF12323 Helix-turn-helix domain HYG86_07910 PF07282 Putative transposase DNA-binding domain HYG86_07920 PF00881 Nitroreductase family HYG86_07930 PF02645 Uncharacterised protein, DegV family COG1307 HYG86_07935 PF00107 Zinc-binding dehydrogenase HYG86_07935 PF08240 Alcohol dehydrogenase GroES-like domain HYG86_07940 PF00294 pfkB family carbohydrate kinase HYG86_07945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HYG86_07945 PF02378 Phosphotransferase system, EIIC HYG86_07945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HYG86_07950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HYG86_07950 PF08279 HTH domain HYG86_07950 PF05043 Mga helix-turn-helix domain HYG86_07950 PF00874 PRD domain HYG86_07950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HYG86_07955 PF02378 Phosphotransferase system, EIIC HYG86_07955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HYG86_07995 PF01380 SIS domain HYG86_08000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HYG86_08000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HYG86_08000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HYG86_08000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HYG86_08005 PF07949 YbbR-like protein HYG86_08010 PF02457 DisA bacterial checkpoint controller nucleotide-binding HYG86_08025 PF00696 Amino acid kinase family HYG86_08030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HYG86_08030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HYG86_08040 PF00491 Arginase family HYG86_08045 PF01168 Alanine racemase, N-terminal domain HYG86_08050 PF13941 MutL protein HYG86_08055 PF02310 B12 binding domain HYG86_08055 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase HYG86_08055 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit HYG86_08060 PF16552 D-ornithine 4,5-aminomutase alpha-subunit HYG86_08065 PF00291 Pyridoxal-phosphate dependent enzyme HYG86_08075 PF01113 Dihydrodipicolinate reductase, N-terminus HYG86_08080 PF00158 Sigma-54 interaction domain HYG86_08080 PF13426 PAS domain HYG86_08080 PF02954 Bacterial regulatory protein, Fis family HYG86_08085 PF03845 Spore germination protein HYG86_08090 PF03323 Bacillus/Clostridium GerA spore germination protein HYG86_08105 PF01520 N-acetylmuramoyl-L-alanine amidase HYG86_08110 PF13538 UvrD-like helicase C-terminal domain HYG86_08125 PF00380 Ribosomal protein S9/S16 HYG86_08130 PF00572 Ribosomal protein L13 HYG86_08135 PF01416 tRNA pseudouridine synthase HYG86_08140 PF02361 Cobalt transport protein HYG86_08145 PF00005 ABC transporter HYG86_08150 PF00005 ABC transporter HYG86_08155 PF01196 Ribosomal protein L17 HYG86_08160 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HYG86_08160 PF01000 RNA polymerase Rpb3/RpoA insert domain HYG86_08160 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HYG86_08165 PF00163 Ribosomal protein S4/S9 N-terminal domain HYG86_08165 PF01479 S4 domain HYG86_08170 PF00411 Ribosomal protein S11 HYG86_08175 PF00416 Ribosomal protein S13/S18 HYG86_08180 PF00444 Ribosomal protein L36 HYG86_08185 PF01176 Translation initiation factor 1A / IF-1 HYG86_08195 PF00557 Metallopeptidase family M24 HYG86_08200 PF05191 Adenylate kinase, active site lid HYG86_08205 PF00344 SecY translocase HYG86_08210 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HYG86_08215 PF00327 Ribosomal protein L30p/L7e HYG86_08220 PF00333 Ribosomal protein S5, N-terminal domain HYG86_08220 PF03719 Ribosomal protein S5, C-terminal domain HYG86_08225 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HYG86_08230 PF00347 Ribosomal protein L6 HYG86_08235 PF00410 Ribosomal protein S8 HYG86_08240 PF00253 Ribosomal protein S14p/S29e HYG86_08245 PF00281 Ribosomal protein L5 HYG86_08245 PF00673 ribosomal L5P family C-terminus HYG86_08250 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HYG86_08250 PF00467 KOW motif HYG86_08255 PF00238 Ribosomal protein L14p/L23e HYG86_08260 PF00366 Ribosomal protein S17 HYG86_08265 PF00831 Ribosomal L29 protein HYG86_08270 PF00252 Ribosomal protein L16p/L10e HYG86_08275 PF07650 KH domain HYG86_08275 PF00189 Ribosomal protein S3, C-terminal domain HYG86_08280 PF00237 Ribosomal protein L22p/L17e HYG86_08285 PF00203 Ribosomal protein S19 HYG86_08290 PF00181 Ribosomal Proteins L2, RNA binding domain HYG86_08290 PF03947 Ribosomal Proteins L2, C-terminal domain HYG86_08295 PF00276 Ribosomal protein L23 HYG86_08300 PF00573 Ribosomal protein L4/L1 family HYG86_08305 PF00297 Ribosomal protein L3 HYG86_08310 PF00338 Ribosomal protein S10p/S20e HYG86_08315 PF03143 Elongation factor Tu C-terminal domain HYG86_08315 PF00009 Elongation factor Tu GTP binding domain HYG86_08315 PF03144 Elongation factor Tu domain 2 HYG86_08320 PF00679 Elongation factor G C-terminus HYG86_08320 PF14492 Elongation Factor G, domain II HYG86_08320 PF03764 Elongation factor G, domain IV HYG86_08320 PF00009 Elongation factor Tu GTP binding domain HYG86_08320 PF03144 Elongation factor Tu domain 2 HYG86_08325 PF00177 Ribosomal protein S7p/S5e HYG86_08330 PF00164 Ribosomal protein S12/S23 HYG86_08335 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HYG86_08340 PF04997 RNA polymerase Rpb1, domain 1 HYG86_08340 PF00623 RNA polymerase Rpb1, domain 2 HYG86_08340 PF05000 RNA polymerase Rpb1, domain 4 HYG86_08340 PF04983 RNA polymerase Rpb1, domain 3 HYG86_08340 PF04998 RNA polymerase Rpb1, domain 5 HYG86_08345 PF04560 RNA polymerase Rpb2, domain 7 HYG86_08345 PF00562 RNA polymerase Rpb2, domain 6 HYG86_08345 PF10385 RNA polymerase beta subunit external 1 domain HYG86_08345 PF04565 RNA polymerase Rpb2, domain 3 HYG86_08345 PF04561 RNA polymerase Rpb2, domain 2 HYG86_08345 PF04563 RNA polymerase beta subunit HYG86_08350 PF16320 Ribosomal protein L7/L12 dimerisation domain HYG86_08350 PF00542 Ribosomal protein L7/L12 C-terminal domain HYG86_08355 PF00466 Ribosomal protein L10 HYG86_08360 PF00687 Ribosomal protein L1p/L10e family HYG86_08365 PF03946 Ribosomal protein L11, N-terminal domain HYG86_08365 PF00298 Ribosomal protein L11, RNA binding domain HYG86_08370 PF00467 KOW motif HYG86_08370 PF02357 Transcription termination factor nusG HYG86_08375 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HYG86_08380 PF00471 Ribosomal protein L33 HYG86_08385 PF03143 Elongation factor Tu C-terminal domain HYG86_08385 PF03144 Elongation factor Tu domain 2 HYG86_08385 PF00009 Elongation factor Tu GTP binding domain HYG86_08415 PF04542 Sigma-70 region 2 HYG86_08415 PF08281 Sigma-70, region 4 HYG86_08420 PF00588 SpoU rRNA Methylase family HYG86_08420 PF08032 RNA 2'-O ribose methyltransferase substrate binding HYG86_08425 PF02511 Thymidylate synthase complementing protein HYG86_08430 PF00636 Ribonuclease III domain HYG86_08435 PF01406 tRNA synthetases class I (C) catalytic domain HYG86_08435 PF09190 DALR domain HYG86_08440 PF00132 Bacterial transferase hexapeptide (six repeats) HYG86_08440 PF06426 Serine acetyltransferase, N-terminal HYG86_08445 PF00749 tRNA synthetases class I (E and Q), catalytic domain HYG86_08450 PF02542 YgbB family HYG86_08455 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HYG86_08465 PF02559 CarD-like/TRCF domain HYG86_08475 PF01066 CDP-alcohol phosphatidyltransferase HYG86_08480 PF02457 DisA bacterial checkpoint controller nucleotide-binding HYG86_08480 PF12826 Helix-hairpin-helix motif HYG86_08480 PF10635 DisA bacterial checkpoint controller linker region HYG86_08485 PF18073 Rubredoxin metal binding domain HYG86_08495 PF10431 C-terminal, D2-small domain, of ClpB protein HYG86_08495 PF00004 ATPase family associated with various cellular activities (AAA) HYG86_08495 PF07724 AAA domain (Cdc48 subfamily) HYG86_08495 PF17871 AAA lid domain HYG86_08495 PF02861 Clp amino terminal domain, pathogenicity island component HYG86_08500 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain HYG86_08505 PF02151 UvrB/uvrC motif HYG86_08510 PF05848 CtsR N-terminal HTH domain HYG86_08510 PF17727 CtsR C-terminal dimerization domain HYG86_08520 PF00005 ABC transporter HYG86_08525 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_08530 PF00497 Bacterial extracellular solute-binding proteins, family 3 HYG86_08540 PF03330 Lytic transglycolase HYG86_08545 PF03330 Lytic transglycolase HYG86_08615 PF00152 tRNA synthetases class II (D, K and N) HYG86_08615 PF01336 OB-fold nucleic acid binding domain HYG86_08620 PF01272 Transcription elongation factor, GreA/GreB, C-term HYG86_08620 PF03449 Transcription elongation factor, N-terminal HYG86_08625 PF00202 Aminotransferase class-III HYG86_08640 PF01207 Dihydrouridine synthase (Dus) HYG86_08650 PF00990 Diguanylate cyclase, GGDEF domain HYG86_08650 PF00072 Response regulator receiver domain HYG86_08655 PF13380 CoA binding domain HYG86_08665 PF01906 Putative heavy-metal-binding HYG86_08675 PF00005 ABC transporter HYG86_08680 PF00392 Bacterial regulatory proteins, gntR family HYG86_08685 PF00581 Rhodanese-like domain HYG86_08690 PF03309 Type III pantothenate kinase HYG86_08695 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HYG86_08695 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HYG86_08700 PF00890 FAD binding domain HYG86_08700 PF02910 Fumarate reductase flavoprotein C-term HYG86_08705 PF02445 Quinolinate synthetase A protein HYG86_08715 PF01268 Formate--tetrahydrofolate ligase HYG86_08720 PF01979 Amidohydrolase family HYG86_08725 PF02971 Formiminotransferase domain HYG86_08725 PF07837 Formiminotransferase domain, N-terminal subdomain HYG86_08730 PF17391 Urocanase N-terminal domain HYG86_08730 PF17392 Urocanase C-terminal domain HYG86_08730 PF01175 Urocanase Rossmann-like domain HYG86_08735 PF00221 Aromatic amino acid lyase HYG86_08740 PF00004 ATPase family associated with various cellular activities (AAA) HYG86_08740 PF17862 AAA+ lid domain HYG86_08740 PF06480 FtsH Extracellular HYG86_08740 PF01434 Peptidase family M41 HYG86_08745 PF00156 Phosphoribosyl transferase domain HYG86_08750 PF01171 PP-loop family HYG86_08750 PF11734 TilS substrate C-terminal domain HYG86_08755 PF07228 Stage II sporulation protein E (SpoIIE) HYG86_08785 PF00575 S1 RNA binding domain HYG86_08805 PF08486 Stage II sporulation protein HYG86_08810 PF00216 Bacterial DNA-binding protein HYG86_08815 PF03819 MazG nucleotide pyrophosphohydrolase domain HYG86_08820 PF14667 Polysaccharide biosynthesis C-terminal domain HYG86_08820 PF01943 Polysaccharide biosynthesis protein HYG86_08825 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HYG86_08825 PF15714 Stage V sporulation protein T C-terminal, transcription factor HYG86_08830 PF13145 PPIC-type PPIASE domain HYG86_08835 PF17757 UvrB interaction domain HYG86_08835 PF03461 TRCF domain HYG86_08835 PF02559 CarD-like/TRCF domain HYG86_08835 PF00271 Helicase conserved C-terminal domain HYG86_08835 PF00270 DEAD/DEAH box helicase HYG86_08845 PF00478 IMP dehydrogenase / GMP reductase domain HYG86_08845 PF00571 CBS domain HYG86_08850 PF01195 Peptidyl-tRNA hydrolase HYG86_08855 PF14693 Ribosomal protein TL5, C-terminal domain HYG86_08855 PF01386 Ribosomal L25p family HYG86_08860 PF14572 Phosphoribosyl synthetase-associated domain HYG86_08860 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HYG86_08865 PF00132 Bacterial transferase hexapeptide (six repeats) HYG86_08865 PF00483 Nucleotidyl transferase HYG86_08870 PF04026 SpoVG HYG86_08875 PF13291 ACT domain HYG86_08875 PF00291 Pyridoxal-phosphate dependent enzyme HYG86_08880 PF00156 Phosphoribosyl transferase domain HYG86_08880 PF09182 Bacterial purine repressor, N-terminal HYG86_08890 PF08544 GHMP kinases C terminal HYG86_08890 PF00288 GHMP kinases N terminal domain HYG86_08895 PF08443 RimK-like ATP-grasp domain HYG86_08895 PF08245 Mur ligase middle domain HYG86_08895 PF02875 Mur ligase family, glutamate ligase domain HYG86_08900 PF03575 Peptidase family S51 HYG86_08905 PF00317 Ribonucleotide reductase, all-alpha domain HYG86_08905 PF03477 ATP cone domain HYG86_08905 PF02867 Ribonucleotide reductase, barrel domain HYG86_08910 PF01476 LysM domain HYG86_08910 PF03734 L,D-transpeptidase catalytic domain HYG86_08915 PF00188 Cysteine-rich secretory protein family HYG86_08925 PF01476 LysM domain HYG86_08935 PF06257 Biofilm formation stimulator VEG HYG86_08940 PF01520 N-acetylmuramoyl-L-alanine amidase HYG86_08940 PF08239 Bacterial SH3 domain HYG86_08945 PF05582 YabG peptidase U57 HYG86_08960 PF00398 Ribosomal RNA adenine dimethylase HYG86_08965 PF13331 Domain of unknown function (DUF4093) HYG86_08965 PF01751 Toprim domain HYG86_08970 PF01026 TatD related DNase HYG86_08975 PF01588 Putative tRNA binding domain HYG86_08975 PF09334 tRNA synthetases class I (M) HYG86_08975 PF08264 Anticodon-binding domain of tRNA HYG86_08995 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HYG86_08995 PF18277 AbrB C-terminal domain HYG86_09000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HYG86_09005 PF05175 Methyltransferase small domain HYG86_09010 PF06156 Initiation control protein YabA HYG86_09015 PF04468 PSP1 C-terminal conserved region HYG86_09025 PF06153 Cyclic-di-AMP receptor HYG86_09030 PF02223 Thymidylate kinase HYG86_09035 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HYG86_09035 PF01276 Orn/Lys/Arg decarboxylase, major domain HYG86_09055 PF00027 Cyclic nucleotide-binding domain HYG86_09055 PF07885 Ion channel HYG86_09075 PF01476 LysM domain HYG86_09075 PF05257 CHAP domain HYG86_09080 PF05105 Bacteriophage holin family HYG86_09185 PF03592 Terminase small subunit HYG86_09185 PF10668 Phage terminase small subunit HYG86_09240 PF00436 Single-strand binding protein family HYG86_09245 PF06725 3D domain HYG86_09245 PF01476 LysM domain HYG86_09355 PF00717 Peptidase S24-like HYG86_09355 PF01726 LexA DNA binding domain HYG86_09360 PF01726 LexA DNA binding domain HYG86_09360 PF00717 Peptidase S24-like HYG86_09370 PF00571 CBS domain HYG86_09370 PF00478 IMP dehydrogenase / GMP reductase domain HYG86_09375 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HYG86_09380 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_09385 PF00571 CBS domain HYG86_09385 PF00005 ABC transporter HYG86_09405 PF13187 4Fe-4S dicluster domain HYG86_09410 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HYG86_09440 PF02132 RecR protein HYG86_09440 PF13662 Toprim domain HYG86_09445 PF02575 YbaB/EbfC DNA-binding family HYG86_09450 PF12169 DNA polymerase III subunits gamma and tau domain III HYG86_09465 PF14437 MafB19-like deaminase HYG86_09490 PF02403 Seryl-tRNA synthetase N-terminal domain HYG86_09490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYG86_09495 PF00266 Aminotransferase class-V HYG86_09500 PF00679 Elongation factor G C-terminus HYG86_09500 PF14492 Elongation Factor G, domain II HYG86_09500 PF03764 Elongation factor G, domain IV HYG86_09500 PF00009 Elongation factor Tu GTP binding domain HYG86_09500 PF03144 Elongation factor Tu domain 2 HYG86_09510 PF04679 ATP dependent DNA ligase C terminal region HYG86_09510 PF01068 ATP dependent DNA ligase domain HYG86_09510 PF13298 DNA polymerase Ligase (LigD) HYG86_09515 PF02735 Ku70/Ku80 beta-barrel domain HYG86_09520 PF13597 Anaerobic ribonucleoside-triphosphate reductase HYG86_09520 PF03477 ATP cone domain HYG86_09550 PF00521 DNA gyrase/topoisomerase IV, subunit A HYG86_09550 PF03989 DNA gyrase C-terminal domain, beta-propeller HYG86_09555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_09555 PF00986 DNA gyrase B subunit, carboxyl terminus HYG86_09555 PF00204 DNA gyrase B HYG86_09555 PF01751 Toprim domain HYG86_09560 PF04025 Domain of unknown function (DUF370) HYG86_09565 PF02463 RecF/RecN/SMC N terminal domain HYG86_09575 PF00712 DNA polymerase III beta subunit, N-terminal domain HYG86_09575 PF02767 DNA polymerase III beta subunit, central domain HYG86_09575 PF02768 DNA polymerase III beta subunit, C-terminal domain HYG86_09580 PF11638 DnaA N-terminal domain HYG86_09580 PF00308 Bacterial dnaA protein HYG86_09580 PF08299 Bacterial dnaA protein helix-turn-helix HYG86_09585 PF00468 Ribosomal protein L34 HYG86_09590 PF00825 Ribonuclease P HYG86_09595 PF01809 Putative membrane protein insertion efficiency factor HYG86_09600 PF02096 60Kd inner membrane protein HYG86_09600 PF14849 YidC periplasmic domain HYG86_09605 PF01424 R3H domain HYG86_09605 PF14804 Jag N-terminus HYG86_09610 PF10396 GTP-binding protein TrmE N-terminus HYG86_09610 PF12631 MnmE helical domain HYG86_09610 PF01926 50S ribosome-binding GTPase HYG86_09615 PF13932 GidA associated domain HYG86_09615 PF01134 Glucose inhibited division protein A HYG86_09620 PF02527 rRNA small subunit methyltransferase G HYG86_09625 PF17762 HTH domain found in ParB protein HYG86_09625 PF02195 ParB-like nuclease domain HYG86_09630 PF13614 AAA domain HYG86_09635 PF17762 HTH domain found in ParB protein HYG86_09635 PF02195 ParB-like nuclease domain HYG86_09640 PF00266 Aminotransferase class-V HYG86_09645 PF04474 Protein of unknown function (DUF554) HYG86_09650 PF01168 Alanine racemase, N-terminal domain HYG86_09650 PF00842 Alanine racemase, C-terminal domain HYG86_09665 PF01551 Peptidase family M23 HYG86_09665 PF10145 Phage-related minor tail protein HYG86_09665 PF01464 Transglycosylase SLT domain HYG86_09675 PF03698 Uncharacterised protein family (UPF0180) HYG86_09680 PF06866 Protein of unknown function (DUF1256) HYG86_09715 PF06107 Bacterial protein of unknown function (DUF951) HYG86_09720 PF01250 Ribosomal protein S6 HYG86_09725 PF00436 Single-strand binding protein family HYG86_09730 PF01084 Ribosomal protein S18 HYG86_09745 PF01281 Ribosomal protein L9, N-terminal domain HYG86_09745 PF03948 Ribosomal protein L9, C-terminal domain HYG86_09750 PF01546 Peptidase family M20/M25/M40 HYG86_09750 PF07687 Peptidase dimerisation domain HYG86_09760 PF00709 Adenylosuccinate synthetase HYG86_09785 PF02690 Na+/Pi-cotransporter HYG86_09790 PF01476 LysM domain HYG86_09790 PF00877 NlpC/P60 family HYG86_09800 PF00072 Response regulator receiver domain HYG86_09800 PF00486 Transcriptional regulatory protein, C terminal HYG86_09805 PF13426 PAS domain HYG86_09805 PF00672 HAMP domain HYG86_09805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_09805 PF00512 His Kinase A (phospho-acceptor) domain HYG86_09815 PF09648 YycH protein HYG86_09820 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HYG86_09825 PF00753 Metallo-beta-lactamase superfamily HYG86_09830 PF13180 PDZ domain HYG86_09845 PF02590 Predicted SPOUT methyltransferase HYG86_09865 PF02796 Helix-turn-helix domain of resolvase HYG86_09865 PF00665 Integrase core domain HYG86_09870 PF01695 IstB-like ATP binding protein HYG86_09880 PF08241 Methyltransferase domain HYG86_09900 PF00989 PAS fold HYG86_09900 PF16736 Single Cache-like HYG86_09900 PF00512 His Kinase A (phospho-acceptor) domain HYG86_09900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_09905 PF00486 Transcriptional regulatory protein, C terminal HYG86_09905 PF00072 Response regulator receiver domain HYG86_09915 PF08361 MAATS-type transcriptional repressor, C-terminal region HYG86_09915 PF00440 Bacterial regulatory proteins, tetR family HYG86_09920 PF07690 Major Facilitator Superfamily HYG86_09940 PF00152 tRNA synthetases class II (D, K and N) HYG86_09945 PF14492 Elongation Factor G, domain II HYG86_09945 PF00009 Elongation factor Tu GTP binding domain HYG86_09945 PF00679 Elongation factor G C-terminus HYG86_09945 PF03764 Elongation factor G, domain IV HYG86_09950 PF12833 Helix-turn-helix domain HYG86_09950 PF06445 GyrI-like small molecule binding domain HYG86_09955 PF00664 ABC transporter transmembrane region HYG86_09955 PF00005 ABC transporter HYG86_09960 PF00664 ABC transporter transmembrane region HYG86_09960 PF00005 ABC transporter HYG86_09970 PF13649 Methyltransferase domain HYG86_09975 PF00005 ABC transporter HYG86_09980 PF02687 FtsX-like permease family HYG86_09980 PF18075 FtsX extracellular domain HYG86_09995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG86_09995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG86_10010 PF00570 HRDC domain HYG86_10010 PF00271 Helicase conserved C-terminal domain HYG86_10010 PF16124 RecQ zinc-binding HYG86_10010 PF09382 RQC domain HYG86_10010 PF00270 DEAD/DEAH box helicase HYG86_10020 PF01554 MatE HYG86_10025 PF07687 Peptidase dimerisation domain HYG86_10025 PF01546 Peptidase family M20/M25/M40 HYG86_10030 PF10282 Lactonase, 7-bladed beta-propeller HYG86_10050 PF00749 tRNA synthetases class I (E and Q), catalytic domain HYG86_10050 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HYG86_10060 PF00664 ABC transporter transmembrane region HYG86_10060 PF00005 ABC transporter HYG86_10065 PF00664 ABC transporter transmembrane region HYG86_10065 PF00005 ABC transporter HYG86_10070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HYG86_10070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HYG86_10075 PF00270 DEAD/DEAH box helicase HYG86_10075 PF00271 Helicase conserved C-terminal domain HYG86_10095 PF16242 Pyridoxamine 5'-phosphate oxidase like HYG86_10100 PF07690 Major Facilitator Superfamily HYG86_10110 PF12848 ABC transporter HYG86_10110 PF16326 ABC transporter C-terminal domain HYG86_10110 PF00005 ABC transporter HYG86_10115 PF01131 DNA topoisomerase HYG86_10115 PF01751 Toprim domain HYG86_10120 PF01266 FAD dependent oxidoreductase HYG86_10120 PF00355 Rieske [2Fe-2S] domain HYG86_10130 PF01479 S4 domain HYG86_10130 PF00849 RNA pseudouridylate synthase HYG86_10135 PF17126 RsmF rRNA methyltransferase first C-terminal domain HYG86_10135 PF01189 16S rRNA methyltransferase RsmB/F HYG86_10135 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HYG86_10145 PF03060 Nitronate monooxygenase HYG86_10155 PF05192 MutS domain III HYG86_10155 PF01624 MutS domain I HYG86_10155 PF05188 MutS domain II HYG86_10155 PF05190 MutS family domain IV HYG86_10155 PF00488 MutS domain V HYG86_10175 PF07552 Spore Coat Protein X and V domain HYG86_10180 PF04239 Protein of unknown function (DUF421) HYG86_10190 PF01225 Mur ligase family, catalytic domain HYG86_10190 PF02875 Mur ligase family, glutamate ligase domain HYG86_10190 PF08245 Mur ligase middle domain HYG86_10200 PF03063 Prismane/CO dehydrogenase family HYG86_10205 PF01553 Acyltransferase HYG86_10210 PF02954 Bacterial regulatory protein, Fis family HYG86_10210 PF13426 PAS domain HYG86_10210 PF00158 Sigma-54 interaction domain HYG86_10215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYG86_10220 PF00149 Calcineurin-like phosphoesterase HYG86_10225 PF13514 AAA domain HYG86_10230 PF03129 Anticodon binding domain HYG86_10230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYG86_10240 PF10415 Fumarase C C-terminus HYG86_10240 PF00206 Lyase HYG86_10245 PF13307 Helicase C-terminal domain HYG86_10245 PF06733 DEAD_2 HYG86_10255 PF00912 Transglycosylase HYG86_10255 PF00905 Penicillin binding protein transpeptidase domain HYG86_10260 PF06463 Molybdenum Cofactor Synthesis C HYG86_10260 PF04055 Radical SAM superfamily HYG86_10265 PF01967 MoaC family HYG86_10270 PF17284 Spermidine synthase tetramerisation domain HYG86_10275 PF00491 Arginase family HYG86_10290 PF13426 PAS domain HYG86_10290 PF00158 Sigma-54 interaction domain HYG86_10290 PF02954 Bacterial regulatory protein, Fis family HYG86_10300 PF12544 Lysine-2,3-aminomutase HYG86_10300 PF04055 Radical SAM superfamily HYG86_10310 PF00488 MutS domain V HYG86_10310 PF01713 Smr domain HYG86_10315 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit HYG86_10320 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase HYG86_10320 PF02310 B12 binding domain HYG86_10325 PF06418 CTP synthase N-terminus HYG86_10325 PF00117 Glutamine amidotransferase class-I HYG86_10335 PF00072 Response regulator receiver domain HYG86_10340 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HYG86_10345 PF00923 Transaldolase/Fructose-6-phosphate aldolase HYG86_10350 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HYG86_10355 PF01699 Sodium/calcium exchanger protein HYG86_10360 PF01551 Peptidase family M23 HYG86_10375 PF01197 Ribosomal protein L31 HYG86_10380 PF00265 Thymidine kinase HYG86_10385 PF07136 Protein of unknown function (DUF1385) HYG86_10390 PF03462 PCRF domain HYG86_10390 PF00472 RF-1 domain HYG86_10395 PF05175 Methyltransferase small domain HYG86_10395 PF17827 PrmC N-terminal domain HYG86_10400 PF04539 Sigma-70 region 3 HYG86_10400 PF04545 Sigma-70, region 4 HYG86_10400 PF04542 Sigma-70 region 2 HYG86_10405 PF09551 Stage II sporulation protein R (spore_II_R) HYG86_10420 PF02082 Transcriptional regulator HYG86_10425 PF00266 Aminotransferase class-V HYG86_10430 PF01592 NifU-like N terminal domain HYG86_10440 PF01206 Sulfurtransferase TusA HYG86_10455 PF02690 Na+/Pi-cotransporter HYG86_10460 PF01475 Ferric uptake regulator family HYG86_10470 PF03481 Putative GTP-binding controlling metal-binding HYG86_10470 PF01300 Telomere recombination HYG86_10475 PF02659 Putative manganese efflux pump HYG86_10480 PF01451 Low molecular weight phosphotyrosine protein phosphatase HYG86_10485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_10485 PF00672 HAMP domain HYG86_10485 PF02743 Cache domain HYG86_10490 PF02502 Ribose/Galactose Isomerase HYG86_10495 PF04260 Protein of unknown function (DUF436) HYG86_10500 PF00464 Serine hydroxymethyltransferase HYG86_10510 PF14437 MafB19-like deaminase HYG86_10520 PF02491 SHS2 domain inserted in FTSA HYG86_10525 PF03061 Thioesterase superfamily HYG86_10530 PF05853 beta-keto acid cleavage enzyme HYG86_10545 PF00119 ATP synthase A chain HYG86_10550 PF00137 ATP synthase subunit C HYG86_10555 PF00430 ATP synthase B/B' CF(0) HYG86_10560 PF00213 ATP synthase delta (OSCP) subunit HYG86_10565 PF02874 ATP synthase alpha/beta family, beta-barrel domain HYG86_10565 PF00306 ATP synthase alpha/beta chain, C terminal domain HYG86_10565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYG86_10570 PF00231 ATP synthase HYG86_10575 PF02874 ATP synthase alpha/beta family, beta-barrel domain HYG86_10575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYG86_10580 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HYG86_10580 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HYG86_10585 PF07997 Protein of unknown function (DUF1694) HYG86_10595 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HYG86_10600 PF08486 Stage II sporulation protein HYG86_10610 PF12116 Stage III sporulation protein D HYG86_10620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYG86_10620 PF00460 Flagella basal body rod protein HYG86_10625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYG86_10625 PF00460 Flagella basal body rod protein HYG86_10675 PF03851 UV-endonuclease UvdE HYG86_10680 PF00294 pfkB family carbohydrate kinase HYG86_10685 PF01156 Inosine-uridine preferring nucleoside hydrolase HYG86_10690 PF02578 Multi-copper polyphenol oxidoreductase laccase HYG86_10695 PF01042 Endoribonuclease L-PSP HYG86_10700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HYG86_10700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HYG86_10700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HYG86_10700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HYG86_10710 PF06580 Histidine kinase HYG86_10710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_10710 PF07694 5TMR of 5TMR-LYT HYG86_10710 PF13492 GAF domain HYG86_10715 PF04397 LytTr DNA-binding domain HYG86_10715 PF00072 Response regulator receiver domain HYG86_10720 PF02554 Carbon starvation protein CstA HYG86_10730 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG86_10735 PF00085 Thioredoxin HYG86_10740 PF09338 Glycine/sarcosine/betaine reductase component B subunits HYG86_10755 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HYG86_10760 PF02504 Fatty acid synthesis protein HYG86_10775 PF00258 Flavodoxin HYG86_10775 PF00753 Metallo-beta-lactamase superfamily HYG86_10780 PF01522 Polysaccharide deacetylase HYG86_10790 PF12390 Selenocysteine synthase N terminal HYG86_10790 PF03841 L-seryl-tRNA selenium transferase HYG86_10795 PF00009 Elongation factor Tu GTP binding domain HYG86_10795 PF03144 Elongation factor Tu domain 2 HYG86_10795 PF09105 Elongation factor SelB, winged helix HYG86_10795 PF09106 Elongation factor SelB, winged helix HYG86_10795 PF09107 Elongation factor SelB, winged helix HYG86_10800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYG86_10800 PF03466 LysR substrate binding domain HYG86_10805 PF00586 AIR synthase related protein, N-terminal domain HYG86_10805 PF02769 AIR synthase related protein, C-terminal domain HYG86_10815 PF02634 FdhD/NarQ family HYG86_10835 PF00994 Probable molybdopterin binding domain HYG86_10835 PF03453 MoeA N-terminal region (domain I and II) HYG86_10835 PF03454 MoeA C-terminal region (domain IV) HYG86_10840 PF12728 Helix-turn-helix domain HYG86_10840 PF12727 PBP superfamily domain HYG86_10845 PF00166 Chaperonin 10 Kd subunit HYG86_10850 PF00118 TCP-1/cpn60 chaperonin family HYG86_10855 PF07726 ATPase family associated with various cellular activities (AAA) HYG86_10855 PF17863 AAA lid domain HYG86_10860 PF01882 Protein of unknown function DUF58 HYG86_10875 PF00117 Glutamine amidotransferase class-I HYG86_10875 PF00958 GMP synthase C terminal domain HYG86_10875 PF02540 NAD synthase HYG86_10890 PF13333 Integrase core domain HYG86_10890 PF13276 HTH-like domain HYG86_10890 PF00665 Integrase core domain HYG86_10905 PF02661 Fic/DOC family HYG86_10905 PF12728 Helix-turn-helix domain HYG86_10950 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HYG86_10960 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HYG86_10960 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HYG86_10965 PF00860 Permease family HYG86_10970 PF10397 Adenylosuccinate lyase C-terminus HYG86_10970 PF00206 Lyase HYG86_10975 PF01259 SAICAR synthetase HYG86_10980 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase HYG86_10990 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HYG86_10990 PF02769 AIR synthase related protein, C-terminal domain HYG86_10990 PF00586 AIR synthase related protein, N-terminal domain HYG86_10995 PF00156 Phosphoribosyl transferase domain HYG86_11000 PF00586 AIR synthase related protein, N-terminal domain HYG86_11000 PF02769 AIR synthase related protein, C-terminal domain HYG86_11005 PF00551 Formyl transferase HYG86_11010 PF01808 AICARFT/IMPCHase bienzyme HYG86_11010 PF02142 MGS-like domain HYG86_11015 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HYG86_11015 PF02843 Phosphoribosylglycinamide synthetase, C domain HYG86_11015 PF02844 Phosphoribosylglycinamide synthetase, N domain HYG86_11040 PF01554 MatE HYG86_11050 PF00158 Sigma-54 interaction domain HYG86_11050 PF02954 Bacterial regulatory protein, Fis family HYG86_11050 PF00989 PAS fold HYG86_11055 PF03610 PTS system fructose IIA component HYG86_11055 PF05524 PEP-utilising enzyme, N-terminal HYG86_11055 PF00391 PEP-utilising enzyme, mobile domain HYG86_11055 PF00381 PTS HPr component phosphorylation site HYG86_11070 PF00381 PTS HPr component phosphorylation site HYG86_11075 PF02734 DAK2 domain HYG86_11080 PF02733 Dak1 domain HYG86_11090 PF01593 Flavin containing amine oxidoreductase HYG86_11095 PF01545 Cation efflux family HYG86_11095 PF16916 Dimerisation domain of Zinc Transporter HYG86_11105 PF01713 Smr domain HYG86_11105 PF00488 MutS domain V HYG86_11115 PF02915 Rubrerythrin HYG86_11130 PF01119 DNA mismatch repair protein, C-terminal domain HYG86_11130 PF08676 MutL C terminal dimerisation domain HYG86_11135 PF00579 tRNA synthetases class I (W and Y) HYG86_11140 PF01371 Trp repressor protein HYG86_11145 PF00465 Iron-containing alcohol dehydrogenase HYG86_11155 PF00580 UvrD/REP helicase N-terminal domain HYG86_11155 PF13361 UvrD-like helicase C-terminal domain HYG86_11160 PF03120 NAD-dependent DNA ligase OB-fold domain HYG86_11160 PF00533 BRCA1 C Terminus (BRCT) domain HYG86_11160 PF01653 NAD-dependent DNA ligase adenylation domain HYG86_11160 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HYG86_11160 PF12826 Helix-hairpin-helix motif HYG86_11180 PF01425 Amidase HYG86_11185 PF02934 GatB/GatE catalytic domain HYG86_11185 PF02637 GatB domain HYG86_11190 PF01430 Hsp33 protein HYG86_11195 PF00072 Response regulator receiver domain HYG86_11205 PF00072 Response regulator receiver domain HYG86_11205 PF00486 Transcriptional regulatory protein, C terminal HYG86_11210 PF16736 Single Cache-like HYG86_11210 PF00989 PAS fold HYG86_11210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_11210 PF00512 His Kinase A (phospho-acceptor) domain HYG86_11215 PF00005 ABC transporter HYG86_11235 PF00873 AcrB/AcrD/AcrF family HYG86_11255 PF02374 Anion-transporting ATPase HYG86_11260 PF02374 Anion-transporting ATPase HYG86_11275 PF01979 Amidohydrolase family HYG86_11280 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HYG86_11285 PF01380 SIS domain HYG86_11285 PF01418 Helix-turn-helix domain, rpiR family HYG86_11290 PF13580 SIS domain HYG86_11295 PF02378 Phosphotransferase system, EIIC HYG86_11295 PF00367 phosphotransferase system, EIIB HYG86_11315 PF00144 Beta-lactamase HYG86_11320 PF01938 TRAM domain HYG86_11320 PF05958 tRNA (Uracil-5-)-methyltransferase HYG86_11325 PF00589 Phage integrase family HYG86_11325 PF02899 Phage integrase, N-terminal SAM-like domain HYG86_11425 PF02583 Metal-sensitive transcriptional repressor HYG86_11430 PF00403 Heavy-metal-associated domain HYG86_11470 PF01554 MatE HYG86_11475 PF02583 Metal-sensitive transcriptional repressor HYG86_11480 PF00005 ABC transporter HYG86_11485 PF02687 FtsX-like permease family HYG86_11485 PF12704 MacB-like periplasmic core domain HYG86_11495 PF07690 Major Facilitator Superfamily HYG86_11500 PF03033 Glycosyltransferase family 28 N-terminal domain HYG86_11510 PF01695 IstB-like ATP binding protein HYG86_11535 PF00210 Ferritin-like domain HYG86_11540 PF01381 Helix-turn-helix HYG86_11550 PF00005 ABC transporter HYG86_11550 PF13732 Domain of unknown function (DUF4162) HYG86_11560 PF00664 ABC transporter transmembrane region HYG86_11560 PF00005 ABC transporter HYG86_11565 PF00664 ABC transporter transmembrane region HYG86_11565 PF00005 ABC transporter HYG86_11580 PF00391 PEP-utilising enzyme, mobile domain HYG86_11580 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HYG86_11585 PF00005 ABC transporter HYG86_11585 PF12848 ABC transporter HYG86_11590 PF01699 Sodium/calcium exchanger protein HYG86_11615 PF02416 mttA/Hcf106 family HYG86_11620 PF00902 Sec-independent protein translocase protein (TatC) HYG86_11625 PF04205 FMN-binding domain HYG86_11625 PF01794 Ferric reductase like transmembrane component HYG86_11630 PF04143 Sulphur transport HYG86_11640 PF04143 Sulphur transport HYG86_11645 PF03466 LysR substrate binding domain HYG86_11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYG86_11650 PF00990 Diguanylate cyclase, GGDEF domain HYG86_11670 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG86_11670 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HYG86_11675 PF04397 LytTr DNA-binding domain HYG86_11675 PF00072 Response regulator receiver domain HYG86_11680 PF00005 ABC transporter HYG86_11700 PF12833 Helix-turn-helix domain HYG86_11715 PF06445 GyrI-like small molecule binding domain HYG86_11715 PF12833 Helix-turn-helix domain HYG86_11725 PF00248 Aldo/keto reductase family HYG86_11755 PF01381 Helix-turn-helix HYG86_11770 PF08331 Domain of unknown function (DUF1730) HYG86_11775 PF02535 ZIP Zinc transporter HYG86_11780 PF01048 Phosphorylase superfamily HYG86_11785 PF00144 Beta-lactamase HYG86_11790 PF04542 Sigma-70 region 2 HYG86_11790 PF08281 Sigma-70, region 4 HYG86_11800 PF13732 Domain of unknown function (DUF4162) HYG86_11800 PF00005 ABC transporter HYG86_11820 PF00248 Aldo/keto reductase family HYG86_11830 PF00248 Aldo/keto reductase family HYG86_11840 PF00248 Aldo/keto reductase family HYG86_11860 PF00440 Bacterial regulatory proteins, tetR family HYG86_11865 PF07690 Major Facilitator Superfamily HYG86_11875 PF13411 MerR HTH family regulatory protein HYG86_11880 PF00248 Aldo/keto reductase family HYG86_11885 PF00232 Glycosyl hydrolase family 1 HYG86_11890 PF00186 Dihydrofolate reductase HYG86_11900 PF07282 Putative transposase DNA-binding domain HYG86_11900 PF12323 Helix-turn-helix domain HYG86_11900 PF01385 Probable transposase HYG86_11905 PF00005 ABC transporter HYG86_11915 PF00226 DnaJ domain HYG86_11915 PF01556 DnaJ C terminal domain HYG86_11915 PF00684 DnaJ central domain HYG86_11920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_11925 PF06961 Protein of unknown function (DUF1294) HYG86_11930 PF13538 UvrD-like helicase C-terminal domain HYG86_11935 PF00375 Sodium:dicarboxylate symporter family HYG86_11945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HYG86_11955 PF15975 Flotillin HYG86_11955 PF01145 SPFH domain / Band 7 family HYG86_11980 PF03055 Retinal pigment epithelial membrane protein HYG86_11990 PF09962 Uncharacterized conserved protein (DUF2196) HYG86_12000 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HYG86_12010 PF01381 Helix-turn-helix HYG86_12025 PF00375 Sodium:dicarboxylate symporter family HYG86_12035 PF13333 Integrase core domain HYG86_12035 PF00665 Integrase core domain HYG86_12035 PF13276 HTH-like domain HYG86_12040 PF00486 Transcriptional regulatory protein, C terminal HYG86_12040 PF00072 Response regulator receiver domain HYG86_12045 PF00005 ABC transporter HYG86_12055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_12055 PF00512 His Kinase A (phospho-acceptor) domain HYG86_12070 PF00248 Aldo/keto reductase family HYG86_12080 PF01381 Helix-turn-helix HYG86_12080 PF06114 IrrE N-terminal-like domain HYG86_12080 PF09856 Predicted transcriptional regulator (DUF2083) HYG86_12090 PF11849 Domain of unknown function (DUF3369) HYG86_12095 PF12833 Helix-turn-helix domain HYG86_12100 PF01032 FecCD transport family HYG86_12105 PF01032 FecCD transport family HYG86_12110 PF00005 ABC transporter HYG86_12115 PF01497 Periplasmic binding protein HYG86_12120 PF17783 CvfB-like winged helix domain HYG86_12120 PF13509 S1 domain HYG86_12125 PF01047 MarR family HYG86_12135 PF00004 ATPase family associated with various cellular activities (AAA) HYG86_12135 PF17862 AAA+ lid domain HYG86_12135 PF06480 FtsH Extracellular HYG86_12135 PF01434 Peptidase family M41 HYG86_12145 PF00005 ABC transporter HYG86_12155 PF08439 Oligopeptidase F HYG86_12155 PF01432 Peptidase family M3 HYG86_12160 PF02789 Cytosol aminopeptidase family, N-terminal domain HYG86_12160 PF00883 Cytosol aminopeptidase family, catalytic domain HYG86_12165 PF07676 WD40-like Beta Propeller Repeat HYG86_12165 PF00326 Prolyl oligopeptidase family HYG86_12170 PF08220 DeoR-like helix-turn-helix domain HYG86_12170 PF00455 DeoR C terminal sensor domain HYG86_12175 PF16338 Domain of unknown function (DUF4968) HYG86_12175 PF17137 Domain of unknown function (DUF5110) HYG86_12175 PF13802 Galactose mutarotase-like HYG86_12175 PF01055 Glycosyl hydrolases family 31 HYG86_12180 PF02446 4-alpha-glucanotransferase HYG86_12185 PF00343 Carbohydrate phosphorylase HYG86_12200 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_12205 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_12210 PF00005 ABC transporter HYG86_12210 PF03459 TOBE domain HYG86_12210 PF17912 MalK OB fold domain HYG86_12215 PF00356 Bacterial regulatory proteins, lacI family HYG86_12215 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HYG86_12230 PF07690 Major Facilitator Superfamily HYG86_12235 PF00204 DNA gyrase B HYG86_12235 PF01751 Toprim domain HYG86_12235 PF00986 DNA gyrase B subunit, carboxyl terminus HYG86_12235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_12240 PF00521 DNA gyrase/topoisomerase IV, subunit A HYG86_12240 PF03989 DNA gyrase C-terminal domain, beta-propeller HYG86_12255 PF01758 Sodium Bile acid symporter family HYG86_12260 PF00664 ABC transporter transmembrane region HYG86_12260 PF00005 ABC transporter HYG86_12285 PF10437 Bacterial lipoate protein ligase C-terminus HYG86_12285 PF03099 Biotin/lipoate A/B protein ligase family HYG86_12290 PF00563 EAL domain HYG86_12290 PF00990 Diguanylate cyclase, GGDEF domain HYG86_12290 PF03707 Bacterial signalling protein N terminal repeat HYG86_12295 PF02272 DHHA1 domain HYG86_12295 PF01411 tRNA synthetases class II (A) HYG86_12295 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HYG86_12300 PF04055 Radical SAM superfamily HYG86_12305 PF02901 Pyruvate formate lyase-like HYG86_12305 PF01228 Glycine radical HYG86_12310 PF13977 BetI-type transcriptional repressor, C-terminal HYG86_12310 PF00440 Bacterial regulatory proteins, tetR family HYG86_12315 PF13732 Domain of unknown function (DUF4162) HYG86_12315 PF00005 ABC transporter HYG86_12330 PF00730 HhH-GPD superfamily base excision DNA repair protein HYG86_12335 PF03601 Conserved hypothetical protein 698 HYG86_12355 PF01966 HD domain HYG86_12355 PF00072 Response regulator receiver domain HYG86_12360 PF02567 Phenazine biosynthesis-like protein HYG86_12390 PF06071 Protein of unknown function (DUF933) HYG86_12390 PF01926 50S ribosome-binding GTPase HYG86_12395 PF02378 Phosphotransferase system, EIIC HYG86_12395 PF00367 phosphotransferase system, EIIB HYG86_12400 PF16657 Maltogenic Amylase, C-terminal domain HYG86_12400 PF00128 Alpha amylase, catalytic domain HYG86_12405 PF00392 Bacterial regulatory proteins, gntR family HYG86_12405 PF07702 UTRA domain HYG86_12415 PF00899 ThiF family HYG86_12420 PF13091 PLD-like domain HYG86_12420 PF13396 Phospholipase_D-nuclease N-terminal HYG86_12425 PF03553 Na+/H+ antiporter family HYG86_12430 PF04239 Protein of unknown function (DUF421) HYG86_12440 PF00392 Bacterial regulatory proteins, gntR family HYG86_12445 PF00005 ABC transporter HYG86_12455 PF18011 C-terminal domain found in long catalases HYG86_12455 PF06628 Catalase-related immune-responsive HYG86_12455 PF00199 Catalase HYG86_12460 PF04304 Protein of unknown function (DUF454) HYG86_12465 PF00158 Sigma-54 interaction domain HYG86_12465 PF02954 Bacterial regulatory protein, Fis family HYG86_12465 PF13426 PAS domain HYG86_12475 PF01053 Cys/Met metabolism PLP-dependent enzyme HYG86_12500 PF09861 Lactate racemase N-terminal domain HYG86_12505 PF03180 NLPA lipoprotein HYG86_12510 PF00155 Aminotransferase class I and II HYG86_12515 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_12520 PF09383 NIL domain HYG86_12520 PF00005 ABC transporter HYG86_12525 PF00196 Bacterial regulatory proteins, luxR family HYG86_12540 PF07969 Amidohydrolase family HYG86_12545 PF03553 Na+/H+ antiporter family HYG86_12550 PF00465 Iron-containing alcohol dehydrogenase HYG86_12570 PF00884 Sulfatase HYG86_12575 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain HYG86_12575 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain HYG86_12585 PF01695 IstB-like ATP binding protein HYG86_12595 PF00665 Integrase core domain HYG86_12605 PF00665 Integrase core domain HYG86_12610 PF01695 IstB-like ATP binding protein HYG86_12645 PF06463 Molybdenum Cofactor Synthesis C HYG86_12645 PF04055 Radical SAM superfamily HYG86_12650 PF00664 ABC transporter transmembrane region HYG86_12650 PF00005 ABC transporter HYG86_12655 PF04055 Radical SAM superfamily HYG86_12655 PF06463 Molybdenum Cofactor Synthesis C HYG86_12665 PF07730 Histidine kinase HYG86_12670 PF00196 Bacterial regulatory proteins, luxR family HYG86_12670 PF00072 Response regulator receiver domain HYG86_12680 PF00005 ABC transporter HYG86_12700 PF02811 PHP domain HYG86_12725 PF00392 Bacterial regulatory proteins, gntR family HYG86_12730 PF00005 ABC transporter HYG86_12750 PF16326 ABC transporter C-terminal domain HYG86_12750 PF12848 ABC transporter HYG86_12750 PF00005 ABC transporter HYG86_12765 PF06738 Putative threonine/serine exporter HYG86_12775 PF01170 Putative RNA methylase family UPF0020 HYG86_12775 PF02926 THUMP domain HYG86_12795 PF00313 'Cold-shock' DNA-binding domain HYG86_12805 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HYG86_12805 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HYG86_12805 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HYG86_12810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYG86_12820 PF03033 Glycosyltransferase family 28 N-terminal domain HYG86_12820 PF04101 Glycosyltransferase family 28 C-terminal domain HYG86_12825 PF00342 Phosphoglucose isomerase HYG86_12835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HYG86_12835 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HYG86_12845 PF03009 Glycerophosphoryl diester phosphodiesterase family HYG86_12855 PF00128 Alpha amylase, catalytic domain HYG86_12855 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HYG86_12855 PF03714 Bacterial pullanase-associated domain HYG86_12880 PF08468 Methyltransferase small domain N-terminal HYG86_12880 PF05175 Methyltransferase small domain HYG86_12890 PF00849 RNA pseudouridylate synthase HYG86_12890 PF01479 S4 domain HYG86_12895 PF03699 Uncharacterised protein family (UPF0182) HYG86_12935 PF00005 ABC transporter HYG86_12950 PF04960 Glutaminase HYG86_12960 PF00781 Diacylglycerol kinase catalytic domain HYG86_12980 PF00202 Aminotransferase class-III HYG86_12985 PF00990 Diguanylate cyclase, GGDEF domain HYG86_12985 PF00072 Response regulator receiver domain HYG86_12990 PF01926 50S ribosome-binding GTPase HYG86_12990 PF13167 GTP-binding GTPase N-terminal HYG86_12990 PF16360 GTP-binding GTPase Middle Region HYG86_13005 PF00313 'Cold-shock' DNA-binding domain HYG86_13010 PF08281 Sigma-70, region 4 HYG86_13010 PF04542 Sigma-70 region 2 HYG86_13025 PF01545 Cation efflux family HYG86_13025 PF16916 Dimerisation domain of Zinc Transporter HYG86_13030 PF00633 Helix-hairpin-helix motif HYG86_13030 PF00730 HhH-GPD superfamily base excision DNA repair protein HYG86_13030 PF10576 Iron-sulfur binding domain of endonuclease III HYG86_13040 PF00588 SpoU rRNA Methylase family HYG86_13045 PF01205 Uncharacterized protein family UPF0029 HYG86_13045 PF09186 Domain of unknown function (DUF1949) HYG86_13050 PF01261 Xylose isomerase-like TIM barrel HYG86_13060 PF01475 Ferric uptake regulator family HYG86_13065 PF04286 Protein of unknown function (DUF445) HYG86_13070 PF01212 Beta-eliminating lyase HYG86_13075 PF01373 Glycosyl hydrolase family 14 HYG86_13075 PF00128 Alpha amylase, catalytic domain HYG86_13075 PF03423 Carbohydrate binding domain (family 25) HYG86_13080 PF01476 LysM domain HYG86_13080 PF00877 NlpC/P60 family HYG86_13080 PF08239 Bacterial SH3 domain HYG86_13090 PF00392 Bacterial regulatory proteins, gntR family HYG86_13090 PF00571 CBS domain HYG86_13090 PF07085 DRTGG domain HYG86_13090 PF03061 Thioesterase superfamily HYG86_13100 PF14034 Sporulation protein YtrH HYG86_13105 PF02666 Phosphatidylserine decarboxylase HYG86_13115 PF02811 PHP domain HYG86_13115 PF01336 OB-fold nucleic acid binding domain HYG86_13115 PF14579 Helix-hairpin-helix motif HYG86_13115 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HYG86_13115 PF07733 Bacterial DNA polymerase III alpha NTPase domain HYG86_13120 PF04608 Phosphatidylglycerophosphatase A HYG86_13125 PF00390 Malic enzyme, N-terminal domain HYG86_13125 PF03949 Malic enzyme, NAD binding domain HYG86_13145 PF00365 Phosphofructokinase HYG86_13150 PF00391 PEP-utilising enzyme, mobile domain HYG86_13150 PF00224 Pyruvate kinase, barrel domain HYG86_13150 PF02887 Pyruvate kinase, alpha/beta domain HYG86_13165 PF07664 Ferrous iron transport protein B C terminus HYG86_13165 PF07670 Nucleoside recognition HYG86_13165 PF02421 Ferrous iron transport protein B HYG86_13170 PF13187 4Fe-4S dicluster domain HYG86_13185 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HYG86_13185 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HYG86_13190 PF03060 Nitronate monooxygenase HYG86_13195 PF00698 Acyl transferase domain HYG86_13205 PF02801 Beta-ketoacyl synthase, C-terminal domain HYG86_13205 PF00109 Beta-ketoacyl synthase, N-terminal domain HYG86_13210 PF07977 FabA-like domain HYG86_13215 PF00364 Biotin-requiring enzyme HYG86_13220 PF02785 Biotin carboxylase C-terminal domain HYG86_13220 PF00289 Biotin carboxylase, N-terminal domain HYG86_13220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYG86_13225 PF17848 Acetyl-coA carboxylase zinc finger domain HYG86_13225 PF01039 Carboxyl transferase domain HYG86_13230 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HYG86_13235 PF00209 Sodium:neurotransmitter symporter family HYG86_13240 PF06133 Control of competence regulator ComK, YlbF/YmcA HYG86_13250 PF12838 4Fe-4S dicluster domain HYG86_13255 PF00294 pfkB family carbohydrate kinase HYG86_13260 PF04227 Indigoidine synthase A like protein HYG86_13265 PF05193 Peptidase M16 inactive domain HYG86_13270 PF00675 Insulinase (Peptidase family M16) HYG86_13270 PF05193 Peptidase M16 inactive domain HYG86_13280 PF00465 Iron-containing alcohol dehydrogenase HYG86_13295 PF11799 impB/mucB/samB family C-terminal domain HYG86_13295 PF00817 impB/mucB/samB family HYG86_13300 PF08281 Sigma-70, region 4 HYG86_13300 PF04542 Sigma-70 region 2 HYG86_13310 PF01367 5'-3' exonuclease, C-terminal SAM fold HYG86_13310 PF00476 DNA polymerase family A HYG86_13310 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HYG86_13315 PF06827 Zinc finger found in FPG and IleRS HYG86_13315 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HYG86_13315 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HYG86_13320 PF02659 Putative manganese efflux pump HYG86_13325 PF01121 Dephospho-CoA kinase HYG86_13330 PF01464 Transglycosylase SLT domain HYG86_13335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HYG86_13340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HYG86_13345 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_13350 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_13350 PF12911 N-terminal TM domain of oligopeptide transport permease C HYG86_13355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG86_13355 PF00005 ABC transporter HYG86_13360 PF00005 ABC transporter HYG86_13360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG86_13420 PF00707 Translation initiation factor IF-3, C-terminal domain HYG86_13420 PF05198 Translation initiation factor IF-3, N-terminal domain HYG86_13425 PF01632 Ribosomal protein L35 HYG86_13430 PF00453 Ribosomal protein L20 HYG86_13435 PF02386 Cation transport protein HYG86_13440 PF02254 TrkA-N domain HYG86_13440 PF02080 TrkA-C domain HYG86_13445 PF00588 SpoU rRNA Methylase family HYG86_13445 PF08032 RNA 2'-O ribose methyltransferase substrate binding HYG86_13450 PF01409 tRNA synthetases class II core domain (F) HYG86_13450 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HYG86_13455 PF03147 Ferredoxin-fold anticodon binding domain HYG86_13455 PF01588 Putative tRNA binding domain HYG86_13455 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HYG86_13455 PF03483 B3/4 domain HYG86_13455 PF03484 tRNA synthetase B5 domain HYG86_13465 PF02674 Colicin V production protein HYG86_13470 PF14791 DNA polymerase beta thumb HYG86_13470 PF02811 PHP domain HYG86_13470 PF14716 Helix-hairpin-helix domain HYG86_13475 PF00488 MutS domain V HYG86_13475 PF01713 Smr domain HYG86_13480 PF01470 Pyroglutamyl peptidase HYG86_13485 PF00912 Transglycosylase HYG86_13485 PF00905 Penicillin binding protein transpeptidase domain HYG86_13530 PF13302 Acetyltransferase (GNAT) domain HYG86_13535 PF12822 ECF transporter, substrate-specific component HYG86_13565 PF04463 Protein of unknown function (DUF523) HYG86_13570 PF02540 NAD synthase HYG86_13575 PF01709 Transcriptional regulator HYG86_13585 PF02075 Crossover junction endodeoxyribonuclease RuvC HYG86_13590 PF01330 RuvA N terminal domain HYG86_13590 PF07499 RuvA, C-terminal domain HYG86_13595 PF17864 RuvB AAA lid domain HYG86_13595 PF05491 RuvB C-terminal winged helix domain HYG86_13595 PF05496 Holliday junction DNA helicase RuvB P-loop domain HYG86_13605 PF04542 Sigma-70 region 2 HYG86_13610 PF12791 Anti-sigma factor N-terminus HYG86_13615 PF04122 Putative cell wall binding repeat 2 HYG86_13615 PF08486 Stage II sporulation protein HYG86_13620 PF02547 Queuosine biosynthesis protein HYG86_13625 PF01702 Queuine tRNA-ribosyltransferase HYG86_13630 PF02699 Preprotein translocase subunit HYG86_13640 PF00269 Small, acid-soluble spore proteins, alpha/beta type HYG86_13645 PF07556 Protein of unknown function (DUF1538) HYG86_13655 PF00005 ABC transporter HYG86_13655 PF12848 ABC transporter HYG86_13660 PF00733 Asparagine synthase HYG86_13660 PF13537 Glutamine amidotransferase domain HYG86_13665 PF02417 Chromate transporter HYG86_13680 PF04055 Radical SAM superfamily HYG86_13690 PF00132 Bacterial transferase hexapeptide (six repeats) HYG86_13715 PF02355 Protein export membrane protein HYG86_13715 PF07549 SecD/SecF GG Motif HYG86_13720 PF02355 Protein export membrane protein HYG86_13720 PF07549 SecD/SecF GG Motif HYG86_13725 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HYG86_13725 PF17768 RecJ OB domain HYG86_13725 PF02272 DHHA1 domain HYG86_13725 PF01368 DHH family HYG86_13730 PF00156 Phosphoribosyl transferase domain HYG86_13735 PF04607 Region found in RelA / SpoT proteins HYG86_13735 PF02824 TGS domain HYG86_13735 PF13291 ACT domain HYG86_13740 PF02580 D-Tyr-tRNA(Tyr) deacylase HYG86_13745 PF00753 Metallo-beta-lactamase superfamily HYG86_13770 PF00072 Response regulator receiver domain HYG86_13770 PF00990 Diguanylate cyclase, GGDEF domain HYG86_13775 PF04055 Radical SAM superfamily HYG86_13780 PF02938 GAD domain HYG86_13780 PF00152 tRNA synthetases class II (D, K and N) HYG86_13780 PF01336 OB-fold nucleic acid binding domain HYG86_13795 PF07687 Peptidase dimerisation domain HYG86_13795 PF01546 Peptidase family M20/M25/M40 HYG86_13800 PF03553 Na+/H+ antiporter family HYG86_13810 PF00899 ThiF family HYG86_13820 PF00005 ABC transporter HYG86_13825 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_13830 PF12849 PBP superfamily domain HYG86_13835 PF05496 Holliday junction DNA helicase RuvB P-loop domain HYG86_13835 PF12002 MgsA AAA+ ATPase C terminal HYG86_13835 PF16193 AAA C-terminal domain HYG86_13845 PF02645 Uncharacterised protein, DegV family COG1307 HYG86_13850 PF07690 Major Facilitator Superfamily HYG86_13855 PF00005 ABC transporter HYG86_13875 PF00158 Sigma-54 interaction domain HYG86_13875 PF02954 Bacterial regulatory protein, Fis family HYG86_13875 PF00989 PAS fold HYG86_13895 PF02803 Thiolase, C-terminal domain HYG86_13895 PF00108 Thiolase, N-terminal domain HYG86_13900 PF01144 Coenzyme A transferase HYG86_13905 PF01144 Coenzyme A transferase HYG86_13910 PF02667 Short chain fatty acid transporter HYG86_13930 PF00881 Nitroreductase family HYG86_13935 PF11553 Protein of unknown function (DUF3231) HYG86_13945 PF16326 ABC transporter C-terminal domain HYG86_13945 PF12848 ABC transporter HYG86_13945 PF00005 ABC transporter HYG86_13955 PF13847 Methyltransferase domain HYG86_13955 PF03551 Transcriptional regulator PadR-like family HYG86_13960 PF01053 Cys/Met metabolism PLP-dependent enzyme HYG86_13995 PF00528 Binding-protein-dependent transport system inner membrane component HYG86_14000 PF00005 ABC transporter HYG86_14000 PF08402 TOBE domain HYG86_14010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HYG86_14010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HYG86_14010 PF00874 PRD domain HYG86_14010 PF05043 Mga helix-turn-helix domain HYG86_14010 PF08279 HTH domain HYG86_14015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HYG86_14020 PF03611 PTS system sugar-specific permease component HYG86_14030 PF00293 NUDIX domain HYG86_14045 PF00990 Diguanylate cyclase, GGDEF domain HYG86_14045 PF08448 PAS fold HYG86_14060 PF01381 Helix-turn-helix HYG86_14075 PF10503 Esterase PHB depolymerase HYG86_14080 PF02954 Bacterial regulatory protein, Fis family HYG86_14080 PF00989 PAS fold HYG86_14080 PF00158 Sigma-54 interaction domain HYG86_14085 PF13247 4Fe-4S dicluster domain HYG86_14090 PF03063 Prismane/CO dehydrogenase family HYG86_14100 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HYG86_14105 PF00557 Metallopeptidase family M24 HYG86_14115 PF01636 Phosphotransferase enzyme family HYG86_14120 PF01321 Creatinase/Prolidase N-terminal domain HYG86_14120 PF00557 Metallopeptidase family M24 HYG86_14125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG86_14125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG86_14130 PF03816 Cell envelope-related transcriptional attenuator domain HYG86_14140 PF00367 phosphotransferase system, EIIB HYG86_14140 PF02378 Phosphotransferase system, EIIC HYG86_14145 PF00155 Aminotransferase class I and II HYG86_14160 PF00586 AIR synthase related protein, N-terminal domain HYG86_14160 PF02769 AIR synthase related protein, C-terminal domain HYG86_14160 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HYG86_14175 PF00005 ABC transporter HYG86_14180 PF00392 Bacterial regulatory proteins, gntR family HYG86_14185 PF01594 AI-2E family transporter HYG86_14190 PF01595 Cyclin M transmembrane N-terminal domain HYG86_14190 PF03471 Transporter associated domain HYG86_14190 PF00571 CBS domain HYG86_14195 PF00923 Transaldolase/Fructose-6-phosphate aldolase HYG86_14200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HYG86_14210 PF03611 PTS system sugar-specific permease component HYG86_14215 PF00456 Transketolase, thiamine diphosphate binding domain HYG86_14220 PF02779 Transketolase, pyrimidine binding domain HYG86_14220 PF02780 Transketolase, C-terminal domain HYG86_14230 PF13280 WYL domain HYG86_14230 PF08279 HTH domain HYG86_14250 PF00005 ABC transporter HYG86_14265 PF07730 Histidine kinase HYG86_14270 PF00072 Response regulator receiver domain HYG86_14270 PF00196 Bacterial regulatory proteins, luxR family HYG86_14290 PF01593 Flavin containing amine oxidoreductase HYG86_14310 PF13302 Acetyltransferase (GNAT) domain HYG86_14335 PF13649 Methyltransferase domain HYG86_14335 PF08241 Methyltransferase domain HYG86_14350 PF07282 Putative transposase DNA-binding domain HYG86_14350 PF01385 Probable transposase HYG86_14350 PF12323 Helix-turn-helix domain HYG86_14380 PF00005 ABC transporter HYG86_14400 PF01042 Endoribonuclease L-PSP HYG86_14425 PF01934 Protein of unknown function DUF86 HYG86_14440 PF02954 Bacterial regulatory protein, Fis family HYG86_14440 PF00158 Sigma-54 interaction domain HYG86_14440 PF13426 PAS domain HYG86_14445 PF03450 CO dehydrogenase flavoprotein C-terminal domain HYG86_14445 PF00941 FAD binding domain in molybdopterin dehydrogenase HYG86_14450 PF00111 2Fe-2S iron-sulfur cluster binding domain HYG86_14450 PF01799 [2Fe-2S] binding domain HYG86_14455 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HYG86_14455 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HYG86_14460 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HYG86_14475 PF01497 Periplasmic binding protein HYG86_14480 PF01032 FecCD transport family HYG86_14485 PF00005 ABC transporter HYG86_14490 PF00132 Bacterial transferase hexapeptide (six repeats) HYG86_14490 PF14602 Hexapeptide repeat of succinyl-transferase HYG86_14490 PF00483 Nucleotidyl transferase HYG86_14495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HYG86_14495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HYG86_14505 PF00330 Aconitase family (aconitate hydratase) HYG86_14510 PF00694 Aconitase C-terminal domain HYG86_14515 PF02310 B12 binding domain HYG86_14520 PF04303 PrpF protein HYG86_14525 PF13941 MutL protein HYG86_14535 PF01979 Amidohydrolase family HYG86_14540 PF00037 4Fe-4S binding domain HYG86_14555 PF12729 Four helix bundle sensory module for signal transduction HYG86_14555 PF00672 HAMP domain HYG86_14555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_14565 PF00872 Transposase, Mutator family HYG86_14615 PF01695 IstB-like ATP binding protein HYG86_14625 PF00270 DEAD/DEAH box helicase HYG86_14625 PF00271 Helicase conserved C-terminal domain HYG86_14640 PF12161 HsdM N-terminal domain HYG86_14640 PF02384 N-6 DNA Methylase HYG86_14645 PF01420 Type I restriction modification DNA specificity domain HYG86_14665 PF00580 UvrD/REP helicase N-terminal domain HYG86_14665 PF13361 UvrD-like helicase C-terminal domain HYG86_14695 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HYG86_14745 PF00684 DnaJ central domain HYG86_14745 PF00226 DnaJ domain HYG86_14745 PF01556 DnaJ C terminal domain HYG86_14750 PF13087 AAA domain HYG86_14750 PF13091 PLD-like domain HYG86_14775 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HYG86_14790 PF00005 ABC transporter HYG86_14795 PF07730 Histidine kinase HYG86_14800 PF00072 Response regulator receiver domain HYG86_14800 PF00196 Bacterial regulatory proteins, luxR family HYG86_14825 PF05525 Branched-chain amino acid transport protein HYG86_14830 PF13344 Haloacid dehalogenase-like hydrolase HYG86_14830 PF00293 NUDIX domain HYG86_14835 PF00255 Glutathione peroxidase HYG86_14850 PF00005 ABC transporter HYG86_14860 PF01554 MatE HYG86_14870 PF07730 Histidine kinase HYG86_14870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_14875 PF00196 Bacterial regulatory proteins, luxR family HYG86_14875 PF00072 Response regulator receiver domain HYG86_14900 PF02743 Cache domain HYG86_14900 PF00672 HAMP domain HYG86_14900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_14920 PF03063 Prismane/CO dehydrogenase family HYG86_14925 PF00563 EAL domain HYG86_14925 PF03707 Bacterial signalling protein N terminal repeat HYG86_14925 PF00990 Diguanylate cyclase, GGDEF domain HYG86_14945 PF03883 Peroxide stress protein YaaA HYG86_14950 PF00672 HAMP domain HYG86_14950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_14950 PF02743 Cache domain HYG86_14955 PF01556 DnaJ C terminal domain HYG86_14955 PF00684 DnaJ central domain HYG86_14955 PF00226 DnaJ domain HYG86_14975 PF12679 ABC-2 family transporter protein HYG86_14980 PF00005 ABC transporter HYG86_15000 PF00440 Bacterial regulatory proteins, tetR family HYG86_15010 PF00005 ABC transporter HYG86_15020 PF00005 ABC transporter HYG86_15035 PF07670 Nucleoside recognition HYG86_15040 PF04284 Protein of unknown function (DUF441) HYG86_15055 PF05504 Spore germination B3/ GerAC like, C-terminal HYG86_15065 PF03323 Bacillus/Clostridium GerA spore germination protein HYG86_15070 PF01212 Beta-eliminating lyase HYG86_15075 PF01464 Transglycosylase SLT domain HYG86_15075 PF01551 Peptidase family M23 HYG86_15075 PF10145 Phage-related minor tail protein HYG86_15100 PF01812 5-formyltetrahydrofolate cyclo-ligase family HYG86_15105 PF02743 Cache domain HYG86_15105 PF00672 HAMP domain HYG86_15105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_15135 PF13538 UvrD-like helicase C-terminal domain HYG86_15135 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HYG86_15135 PF14490 Helix-hairpin-helix containing domain HYG86_15140 PF13091 PLD-like domain HYG86_15145 PF00248 Aldo/keto reductase family HYG86_15150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_15175 PF12705 PD-(D/E)XK nuclease superfamily HYG86_15180 PF12705 PD-(D/E)XK nuclease superfamily HYG86_15180 PF13361 UvrD-like helicase C-terminal domain HYG86_15180 PF00580 UvrD/REP helicase N-terminal domain HYG86_15205 PF13393 Histidyl-tRNA synthetase HYG86_15215 PF00583 Acetyltransferase (GNAT) family HYG86_15220 PF02645 Uncharacterised protein, DegV family COG1307 HYG86_15230 PF02901 Pyruvate formate lyase-like HYG86_15230 PF01228 Glycine radical HYG86_15235 PF04055 Radical SAM superfamily HYG86_15245 PF00271 Helicase conserved C-terminal domain HYG86_15245 PF00270 DEAD/DEAH box helicase HYG86_15250 PF00293 NUDIX domain HYG86_15255 PF00072 Response regulator receiver domain HYG86_15255 PF01966 HD domain HYG86_15260 PF07486 Cell Wall Hydrolase HYG86_15260 PF01471 Putative peptidoglycan binding domain HYG86_15275 PF13421 SPFH domain-Band 7 family HYG86_15290 PF01625 Peptide methionine sulfoxide reductase HYG86_15310 PF03313 Serine dehydratase alpha chain HYG86_15315 PF11842 Domain of unknown function (DUF3362) HYG86_15315 PF04055 Radical SAM superfamily HYG86_15315 PF08497 Radical SAM N-terminal HYG86_15335 PF02675 S-adenosylmethionine decarboxylase HYG86_15345 PF01523 Putative modulator of DNA gyrase HYG86_15350 PF00924 Mechanosensitive ion channel HYG86_15355 PF02675 S-adenosylmethionine decarboxylase HYG86_15360 PF01554 MatE HYG86_15375 PF00005 ABC transporter HYG86_15375 PF13732 Domain of unknown function (DUF4162) HYG86_15395 PF02146 Sir2 family HYG86_15405 PF00881 Nitroreductase family HYG86_15410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HYG86_15410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HYG86_15415 PF00155 Aminotransferase class I and II HYG86_15420 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HYG86_15425 PF00403 Heavy-metal-associated domain HYG86_15440 PF08447 PAS fold HYG86_15440 PF00989 PAS fold HYG86_15440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_15440 PF00512 His Kinase A (phospho-acceptor) domain HYG86_15445 PF00158 Sigma-54 interaction domain HYG86_15445 PF00072 Response regulator receiver domain HYG86_15445 PF02954 Bacterial regulatory protein, Fis family HYG86_15475 PF00072 Response regulator receiver domain HYG86_15475 PF00486 Transcriptional regulatory protein, C terminal HYG86_15480 PF16736 Single Cache-like HYG86_15480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_15480 PF00989 PAS fold HYG86_15480 PF00512 His Kinase A (phospho-acceptor) domain HYG86_15485 PF01790 Prolipoprotein diacylglyceryl transferase HYG86_15495 PF00872 Transposase, Mutator family HYG86_15520 PF00892 EamA-like transporter family HYG86_15525 PF02660 Glycerol-3-phosphate acyltransferase HYG86_15545 PF01594 AI-2E family transporter HYG86_15550 PF02272 DHHA1 domain HYG86_15550 PF01411 tRNA synthetases class II (A) HYG86_15550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HYG86_15555 PF06135 IreB regulatory phosphoprotein HYG86_15560 PF00248 Aldo/keto reductase family HYG86_15565 PF03652 Holliday junction resolvase HYG86_15570 PF06949 Protein of unknown function (DUF1292) HYG86_15575 PF02618 YceG-like family HYG86_15580 PF01136 Peptidase family U32 HYG86_15580 PF16325 Peptidase family U32 C-terminal domain HYG86_15585 PF00485 Phosphoribulokinase / Uridine kinase family HYG86_15590 PF03793 PASTA domain HYG86_15590 PF03717 Penicillin-binding Protein dimerisation domain HYG86_15590 PF00905 Penicillin binding protein transpeptidase domain HYG86_15595 PF04542 Sigma-70 region 2 HYG86_15595 PF04545 Sigma-70, region 4 HYG86_15610 PF08501 Shikimate dehydrogenase substrate binding domain HYG86_15610 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HYG86_15610 PF01488 Shikimate / quinate 5-dehydrogenase HYG86_15615 PF00437 Type II/IV secretion system protein HYG86_15620 PF00482 Type II secretion system (T2SS), protein F HYG86_15655 PF01202 Shikimate kinase HYG86_15660 PF00873 AcrB/AcrD/AcrF family HYG86_15685 PF00437 Type II/IV secretion system protein HYG86_15685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HYG86_15690 PF00437 Type II/IV secretion system protein HYG86_15695 PF00482 Type II secretion system (T2SS), protein F HYG86_15715 PF06750 Bacterial Peptidase A24 N-terminal domain HYG86_15715 PF01478 Type IV leader peptidase family HYG86_15720 PF07963 Prokaryotic N-terminal methylation motif HYG86_15720 PF00114 Pilin (bacterial filament) HYG86_15755 PF00005 ABC transporter HYG86_15770 PF17863 AAA lid domain HYG86_15770 PF07726 ATPase family associated with various cellular activities (AAA) HYG86_15795 PF02073 Thermophilic metalloprotease (M29) HYG86_15810 PF07478 D-ala D-ala ligase C-terminus HYG86_15810 PF01820 D-ala D-ala ligase N-terminus HYG86_15815 PF00300 Histidine phosphatase superfamily (branch 1) HYG86_15820 PF04961 Formiminotransferase-cyclodeaminase HYG86_15835 PF08669 Glycine cleavage T-protein C-terminal barrel domain HYG86_15835 PF01571 Aminomethyltransferase folate-binding domain HYG86_15840 PF01597 Glycine cleavage H-protein HYG86_15845 PF02347 Glycine cleavage system P-protein HYG86_15850 PF02347 Glycine cleavage system P-protein HYG86_15855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HYG86_15855 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG86_15860 PF01220 Dehydroquinase class II HYG86_15865 PF01321 Creatinase/Prolidase N-terminal domain HYG86_15865 PF00557 Metallopeptidase family M24 HYG86_15870 PF09285 Elongation factor P, C-terminal HYG86_15870 PF08207 Elongation factor P (EF-P) KOW-like domain HYG86_15870 PF01132 Elongation factor P (EF-P) OB domain HYG86_15890 PF06686 Stage III sporulation protein AC/AD protein family HYG86_15895 PF06686 Stage III sporulation protein AC/AD protein family HYG86_15900 PF09546 Stage III sporulation protein AE (spore_III_AE) HYG86_15920 PF03780 Asp23 family, cell envelope-related function HYG86_15935 PF01029 NusB family HYG86_15940 PF00814 Glycoprotease family HYG86_15945 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HYG86_15945 PF00175 Oxidoreductase NAD-binding domain HYG86_15950 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG86_15950 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HYG86_15955 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HYG86_15955 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HYG86_15960 PF13742 OB-fold nucleic acid binding domain HYG86_15960 PF02601 Exonuclease VII, large subunit HYG86_15965 PF02609 Exonuclease VII small subunit HYG86_15970 PF00348 Polyprenyl synthetase HYG86_15975 PF02681 Divergent PAP2 family HYG86_15985 PF02780 Transketolase, C-terminal domain HYG86_15985 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HYG86_15985 PF02779 Transketolase, pyrimidine binding domain HYG86_15990 PF01479 S4 domain HYG86_15990 PF01728 FtsJ-like methyltransferase HYG86_16000 PF01513 ATP-NAD kinase HYG86_16005 PF02463 RecF/RecN/SMC N terminal domain HYG86_16010 PF17820 PDZ domain HYG86_16010 PF05580 SpoIVB peptidase S55 HYG86_16015 PF00072 Response regulator receiver domain HYG86_16015 PF08769 Sporulation initiation factor Spo0A C terminal HYG86_16030 PF00535 Glycosyl transferase family 2 HYG86_16040 PF00989 PAS fold HYG86_16040 PF02954 Bacterial regulatory protein, Fis family HYG86_16040 PF00158 Sigma-54 interaction domain HYG86_16045 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HYG86_16045 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HYG86_16050 PF00871 Acetokinase family HYG86_16055 PF01515 Phosphate acetyl/butaryl transferase HYG86_16060 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HYG86_16060 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HYG86_16065 PF00871 Acetokinase family HYG86_16080 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HYG86_16080 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HYG86_16080 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HYG86_16095 PF13654 AAA domain HYG86_16095 PF05362 Lon protease (S16) C-terminal proteolytic domain HYG86_16105 PF01546 Peptidase family M20/M25/M40 HYG86_16105 PF07687 Peptidase dimerisation domain HYG86_16120 PF01944 Stage II sporulation protein M HYG86_16125 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HYG86_16125 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HYG86_16130 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HYG86_16130 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HYG86_16130 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HYG86_16135 PF02233 NAD(P) transhydrogenase beta subunit HYG86_16140 PF02915 Rubrerythrin HYG86_16150 PF02899 Phage integrase, N-terminal SAM-like domain HYG86_16150 PF00589 Phage integrase family HYG86_16155 PF01676 Metalloenzyme superfamily HYG86_16160 PF01048 Phosphorylase superfamily HYG86_16165 PF01048 Phosphorylase superfamily HYG86_16170 PF00591 Glycosyl transferase family, a/b domain HYG86_16170 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HYG86_16170 PF02885 Glycosyl transferase family, helical bundle domain HYG86_16175 PF07943 Penicillin-binding protein 5, C-terminal domain HYG86_16175 PF00768 D-alanyl-D-alanine carboxypeptidase HYG86_16180 PF01740 STAS domain HYG86_16185 PF13581 Histidine kinase-like ATPase domain HYG86_16190 PF04545 Sigma-70, region 4 HYG86_16190 PF04542 Sigma-70 region 2 HYG86_16190 PF04539 Sigma-70 region 3 HYG86_16205 PF07311 Dodecin HYG86_16210 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HYG86_16215 PF07451 Stage V sporulation protein AD (SpoVAD) HYG86_16220 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HYG86_16235 PF03323 Bacillus/Clostridium GerA spore germination protein HYG86_16250 PF01869 BadF/BadG/BcrA/BcrD ATPase family HYG86_16255 PF12627 Probable RNA and SrmB- binding site of polymerase A HYG86_16255 PF01743 Poly A polymerase head domain HYG86_16255 PF02272 DHHA1 domain HYG86_16255 PF00571 CBS domain HYG86_16255 PF01368 DHH family HYG86_16260 PF02163 Peptidase family M50 HYG86_16265 PF02616 Segregation and condensation protein ScpA HYG86_16270 PF04079 Segregation and condensation complex subunit ScpB HYG86_16280 PF09579 Sporulation protein YtfJ (Spore_YtfJ) HYG86_16285 PF07943 Penicillin-binding protein 5, C-terminal domain HYG86_16285 PF00768 D-alanyl-D-alanine carboxypeptidase HYG86_16290 PF07670 Nucleoside recognition HYG86_16295 PF07670 Nucleoside recognition HYG86_16305 PF01134 Glucose inhibited division protein A HYG86_16305 PF13932 GidA associated domain HYG86_16315 PF00849 RNA pseudouridylate synthase HYG86_16315 PF01479 S4 domain HYG86_16320 PF00571 CBS domain HYG86_16320 PF08279 HTH domain HYG86_16325 PF03618 Kinase/pyrophosphorylase HYG86_16330 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HYG86_16330 PF02896 PEP-utilising enzyme, TIM barrel domain HYG86_16330 PF00391 PEP-utilising enzyme, mobile domain HYG86_16335 PF00768 D-alanyl-D-alanine carboxypeptidase HYG86_16335 PF07943 Penicillin-binding protein 5, C-terminal domain HYG86_16340 PF13286 Phosphohydrolase-associated domain HYG86_16340 PF01966 HD domain HYG86_16345 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HYG86_16350 PF04545 Sigma-70, region 4 HYG86_16350 PF03979 Sigma-70 factor, region 1.1 HYG86_16350 PF04542 Sigma-70 region 2 HYG86_16350 PF04539 Sigma-70 region 3 HYG86_16350 PF00140 Sigma-70 factor, region 1.2 HYG86_16375 PF01784 NIF3 (NGG1p interacting factor 3) HYG86_16390 PF00210 Ferritin-like domain HYG86_16395 PF01554 MatE HYG86_16415 PF05979 Bacterial protein of unknown function (DUF896) HYG86_16420 PF01820 D-ala D-ala ligase N-terminus HYG86_16420 PF07478 D-ala D-ala ligase C-terminus HYG86_16430 PF14010 Phosphoenolpyruvate carboxylase HYG86_16455 PF00155 Aminotransferase class I and II HYG86_16460 PF08264 Anticodon-binding domain of tRNA HYG86_16460 PF00133 tRNA synthetases class I (I, L, M and V) HYG86_16460 PF13603 Leucyl-tRNA synthetase, Domain 2 HYG86_16460 PF09334 tRNA synthetases class I (M) HYG86_16465 PF10263 SprT-like family HYG86_16465 PF17283 SprT-like zinc ribbon domain HYG86_16470 PF00679 Elongation factor G C-terminus HYG86_16470 PF14492 Elongation Factor G, domain II HYG86_16470 PF00009 Elongation factor Tu GTP binding domain HYG86_16470 PF03144 Elongation factor Tu domain 2 HYG86_16480 PF00474 Sodium:solute symporter family HYG86_16500 PF08486 Stage II sporulation protein HYG86_16525 PF01209 ubiE/COQ5 methyltransferase family HYG86_16530 PF00348 Polyprenyl synthetase HYG86_16535 PF10776 Protein of unknown function (DUF2600) HYG86_16545 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HYG86_16545 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HYG86_16550 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HYG86_16550 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HYG86_16560 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HYG86_16560 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HYG86_16565 PF01979 Amidohydrolase family HYG86_16570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HYG86_16575 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HYG86_16575 PF00117 Glutamine amidotransferase class-I HYG86_16580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYG86_16580 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HYG86_16580 PF02142 MGS-like domain HYG86_16585 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HYG86_16590 PF01180 Dihydroorotate dehydrogenase HYG86_16595 PF00156 Phosphoribosyl transferase domain HYG86_16600 PF02664 S-Ribosylhomocysteinase (LuxS) HYG86_16615 PF02421 Ferrous iron transport protein B HYG86_16615 PF17910 FeoB cytosolic helical domain HYG86_16615 PF07670 Nucleoside recognition HYG86_16615 PF07664 Ferrous iron transport protein B C terminus HYG86_16625 PF01225 Mur ligase family, catalytic domain HYG86_16625 PF02875 Mur ligase family, glutamate ligase domain HYG86_16625 PF08245 Mur ligase middle domain HYG86_16630 PF01943 Polysaccharide biosynthesis protein HYG86_16630 PF14667 Polysaccharide biosynthesis C-terminal domain HYG86_16645 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG86_16650 PF05343 M42 glutamyl aminopeptidase HYG86_16660 PF04239 Protein of unknown function (DUF421) HYG86_16675 PF02566 OsmC-like protein HYG86_16680 PF02082 Transcriptional regulator HYG86_16685 PF00291 Pyridoxal-phosphate dependent enzyme HYG86_16690 PF01790 Prolipoprotein diacylglyceryl transferase HYG86_16695 PF02583 Metal-sensitive transcriptional repressor HYG86_16705 PF02683 Cytochrome C biogenesis protein transmembrane region HYG86_16710 PF00578 AhpC/TSA family HYG86_16725 PF02381 MraZ protein, putative antitoxin-like HYG86_16730 PF01795 MraW methylase family HYG86_16740 PF00905 Penicillin binding protein transpeptidase domain HYG86_16740 PF03717 Penicillin-binding Protein dimerisation domain HYG86_16740 PF03793 PASTA domain HYG86_16745 PF01225 Mur ligase family, catalytic domain HYG86_16745 PF02875 Mur ligase family, glutamate ligase domain HYG86_16745 PF08245 Mur ligase middle domain HYG86_16750 PF01225 Mur ligase family, catalytic domain HYG86_16750 PF08245 Mur ligase middle domain HYG86_16750 PF02875 Mur ligase family, glutamate ligase domain HYG86_16755 PF00953 Glycosyl transferase family 4 HYG86_16760 PF08245 Mur ligase middle domain HYG86_16760 PF02875 Mur ligase family, glutamate ligase domain HYG86_16765 PF01098 Cell cycle protein HYG86_16770 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HYG86_16770 PF01565 FAD binding domain HYG86_16775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HYG86_16785 PF05949 Bacterial protein of unknown function (DUF881) HYG86_16790 PF06947 Protein of unknown function (DUF1290) HYG86_16795 PF02491 SHS2 domain inserted in FTSA HYG86_16800 PF12327 FtsZ family, C-terminal domain HYG86_16800 PF00091 Tubulin/FtsZ family, GTPase domain HYG86_16805 PF03419 Sporulation factor SpoIIGA HYG86_16810 PF04542 Sigma-70 region 2 HYG86_16810 PF04545 Sigma-70, region 4 HYG86_16840 PF04539 Sigma-70 region 3 HYG86_16840 PF04545 Sigma-70, region 4 HYG86_16840 PF04542 Sigma-70 region 2 HYG86_16850 PF05239 PRC-barrel domain HYG86_16855 PF03477 ATP cone domain HYG86_16865 PF01168 Alanine racemase, N-terminal domain HYG86_16875 PF01479 S4 domain HYG86_16875 PF17774 Putative RNA-binding domain in YlmH HYG86_16880 PF05103 DivIVA protein HYG86_16895 PF01264 Chorismate synthase HYG86_16900 PF01761 3-dehydroquinate synthase HYG86_16905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HYG86_16915 PF01258 Prokaryotic dksA/traR C4-type zinc finger HYG86_16920 PF01252 Signal peptidase (SPase) II HYG86_16925 PF00849 RNA pseudouridylate synthase HYG86_16925 PF01479 S4 domain HYG86_16930 PF00860 Permease family HYG86_16935 PF05670 NFACT protein RNA binding domain HYG86_16940 PF00689 Cation transporting ATPase, C-terminus HYG86_16940 PF00690 Cation transporter/ATPase, N-terminus HYG86_16945 PF03755 YicC-like family, N-terminal region HYG86_16945 PF08340 Domain of unknown function (DUF1732) HYG86_16950 PF04025 Domain of unknown function (DUF370) HYG86_16955 PF00625 Guanylate kinase HYG86_16960 PF01192 RNA polymerase Rpb6 HYG86_16965 PF02441 Flavoprotein HYG86_16965 PF04127 DNA / pantothenate metabolism flavoprotein HYG86_16970 PF04851 Type III restriction enzyme, res subunit HYG86_16970 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HYG86_16970 PF18074 Primosomal protein N C-terminal domain HYG86_16970 PF17764 3′ DNA-binding domain (3′BD) HYG86_16970 PF00271 Helicase conserved C-terminal domain HYG86_16975 PF01327 Polypeptide deformylase HYG86_16980 PF00551 Formyl transferase HYG86_16980 PF02911 Formyl transferase, C-terminal domain HYG86_16990 PF04298 Putative neutral zinc metallopeptidase HYG86_16995 PF01189 16S rRNA methyltransferase RsmB/F HYG86_16995 PF01029 NusB family HYG86_17000 PF04055 Radical SAM superfamily HYG86_17010 PF00069 Protein kinase domain HYG86_17010 PF03793 PASTA domain HYG86_17015 PF16745 RsgA N-terminal domain HYG86_17015 PF03193 RsgA GTPase HYG86_17020 PF00834 Ribulose-phosphate 3 epimerase family HYG86_17030 PF09515 Thiamine transporter protein (Thia_YuaJ) HYG86_17040 PF12850 Calcineurin-like phosphoesterase superfamily domain HYG86_17050 PF00830 Ribosomal L28 family HYG86_17055 PF03780 Asp23 family, cell envelope-related function HYG86_17060 PF13684 Dihydroxyacetone kinase family HYG86_17060 PF02734 DAK2 domain HYG86_17065 PF02645 Uncharacterised protein, DegV family COG1307 HYG86_17070 PF03315 Serine dehydratase beta chain HYG86_17070 PF01842 ACT domain HYG86_17075 PF03313 Serine dehydratase alpha chain HYG86_17080 PF00270 DEAD/DEAH box helicase HYG86_17080 PF00271 Helicase conserved C-terminal domain HYG86_17080 PF17191 RecG wedge domain HYG86_17085 PF00269 Small, acid-soluble spore proteins, alpha/beta type HYG86_17090 PF00269 Small, acid-soluble spore proteins, alpha/beta type HYG86_17100 PF01467 Cytidylyltransferase-like HYG86_17105 PF07670 Nucleoside recognition HYG86_17110 PF01734 Patatin-like phospholipase HYG86_17115 PF13180 PDZ domain HYG86_17115 PF05362 Lon protease (S16) C-terminal proteolytic domain HYG86_17120 PF05636 HIGH Nucleotidyl Transferase HYG86_17125 PF00871 Acetokinase family HYG86_17135 PF01783 Ribosomal L32p protein family HYG86_17145 PF02504 Fatty acid synthesis protein HYG86_17150 PF02645 Uncharacterised protein, DegV family COG1307 HYG86_17155 PF00550 Phosphopantetheine attachment site HYG86_17165 PF02463 RecF/RecN/SMC N terminal domain HYG86_17165 PF06470 SMC proteins Flexible Hinge Domain HYG86_17170 PF02881 SRP54-type protein, helical bundle domain HYG86_17170 PF00448 SRP54-type protein, GTPase domain HYG86_17175 PF04542 Sigma-70 region 2 HYG86_17175 PF08281 Sigma-70, region 4 HYG86_17180 PF04297 Putative helix-turn-helix protein, YlxM / p13 like HYG86_17185 PF00448 SRP54-type protein, GTPase domain HYG86_17185 PF02881 SRP54-type protein, helical bundle domain HYG86_17185 PF02978 Signal peptide binding domain HYG86_17190 PF00886 Ribosomal protein S16 HYG86_17200 PF05239 PRC-barrel domain HYG86_17200 PF01782 RimM N-terminal domain HYG86_17205 PF01746 tRNA (Guanine-1)-methyltransferase HYG86_17210 PF01245 Ribosomal protein L19 HYG86_17215 PF10502 Signal peptidase, peptidase S26 HYG86_17220 PF10502 Signal peptidase, peptidase S26 HYG86_17225 PF01926 50S ribosome-binding GTPase HYG86_17230 PF01351 Ribonuclease HII HYG86_17235 PF00072 Response regulator receiver domain HYG86_17235 PF01966 HD domain HYG86_17240 PF02021 Uncharacterised protein family UPF0102 HYG86_17255 PF11799 impB/mucB/samB family C-terminal domain HYG86_17255 PF00817 impB/mucB/samB family HYG86_17260 PF01078 Magnesium chelatase, subunit ChlI HYG86_17260 PF13335 Magnesium chelatase, subunit ChlI C-terminal HYG86_17265 PF06962 Putative rRNA methylase HYG86_17275 PF01066 CDP-alcohol phosphatidyltransferase HYG86_17280 PF05343 M42 glutamyl aminopeptidase HYG86_17285 PF05343 M42 glutamyl aminopeptidase HYG86_17290 PF05343 M42 glutamyl aminopeptidase HYG86_17300 PF02142 MGS-like domain HYG86_17305 PF00750 tRNA synthetases class I (R) HYG86_17305 PF05746 DALR anticodon binding domain HYG86_17305 PF03485 Arginyl tRNA synthetase N terminal domain HYG86_17310 PF12544 Lysine-2,3-aminomutase HYG86_17310 PF04055 Radical SAM superfamily HYG86_17315 PF02481 DNA recombination-mediator protein A HYG86_17320 PF01131 DNA topoisomerase HYG86_17320 PF01751 Toprim domain HYG86_17320 PF01396 Topoisomerase DNA binding C4 zinc finger HYG86_17325 PF01134 Glucose inhibited division protein A HYG86_17330 PF00589 Phage integrase family HYG86_17330 PF02899 Phage integrase, N-terminal SAM-like domain HYG86_17335 PF08222 CodY helix-turn-helix domain HYG86_17335 PF06018 CodY GAF-like domain HYG86_17340 PF00460 Flagella basal body rod protein HYG86_17345 PF00460 Flagella basal body rod protein HYG86_17345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYG86_17350 PF02049 Flagellar hook-basal body complex protein FliE HYG86_17355 PF01514 Secretory protein of YscJ/FliF family HYG86_17355 PF08345 Flagellar M-ring protein C-terminal HYG86_17360 PF01706 FliG C-terminal domain HYG86_17360 PF14841 FliG middle domain HYG86_17360 PF14842 FliG N-terminal domain HYG86_17370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYG86_17370 PF02874 ATP synthase alpha/beta family, beta-barrel domain HYG86_17370 PF18269 T3SS EscN ATPase C-terminal domain HYG86_17390 PF03963 Flagellar hook capping protein - N-terminal region HYG86_17400 PF00460 Flagella basal body rod protein HYG86_17400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYG86_17405 PF06289 Flagellar and Swarming motility proteins HYG86_17410 PF01618 MotA/TolQ/ExbB proton channel family HYG86_17415 PF13677 Membrane MotB of proton-channel complex MotA/MotB HYG86_17415 PF00691 OmpA family HYG86_17425 PF02154 Flagellar motor switch protein FliM HYG86_17425 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HYG86_17430 PF04509 CheC-like family HYG86_17430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HYG86_17435 PF00072 Response regulator receiver domain HYG86_17440 PF04347 Flagellar biosynthesis protein, FliO HYG86_17445 PF00813 FliP family HYG86_17450 PF01313 Bacterial export proteins, family 3 HYG86_17455 PF01311 Bacterial export proteins, family 1 HYG86_17460 PF01312 FlhB HrpN YscU SpaS Family HYG86_17465 PF00771 FHIPEP family HYG86_17470 PF00448 SRP54-type protein, GTPase domain HYG86_17475 PF10609 NUBPL iron-transfer P-loop NTPase HYG86_17485 PF07194 P2 response regulator binding domain HYG86_17485 PF01627 Hpt domain HYG86_17485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG86_17485 PF02895 Signal transducing histidine kinase, homodimeric domain HYG86_17485 PF01584 CheW-like domain HYG86_17490 PF01584 CheW-like domain HYG86_17495 PF04509 CheC-like family HYG86_17500 PF03975 CheD chemotactic sensory transduction HYG86_17505 PF04539 Sigma-70 region 3 HYG86_17505 PF04542 Sigma-70 region 2 HYG86_17505 PF04545 Sigma-70, region 4 HYG86_17535 PF00318 Ribosomal protein S2 HYG86_17540 PF00889 Elongation factor TS HYG86_17545 PF00696 Amino acid kinase family HYG86_17550 PF01765 Ribosome recycling factor HYG86_17560 PF01255 Putative undecaprenyl diphosphate synthase HYG86_17570 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HYG86_17570 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HYG86_17570 PF13288 DXP reductoisomerase C-terminal domain HYG86_17575 PF02163 Peptidase family M50 HYG86_17575 PF17820 PDZ domain HYG86_17580 PF04551 GcpE protein HYG86_17585 PF04073 Aminoacyl-tRNA editing domain HYG86_17585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYG86_17585 PF03129 Anticodon binding domain HYG86_17590 PF00535 Glycosyl transferase family 2 HYG86_17595 PF02308 MgtC family HYG86_17600 PF00929 Exonuclease HYG86_17600 PF07733 Bacterial DNA polymerase III alpha NTPase domain HYG86_17600 PF11490 DNA polymerase III polC-type N-terminus II HYG86_17600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HYG86_17600 PF02811 PHP domain HYG86_17600 PF01336 OB-fold nucleic acid binding domain HYG86_17600 PF14579 Helix-hairpin-helix motif HYG86_17605 PF17384 RimP C-terminal SH3 domain HYG86_17605 PF02576 RimP N-terminal domain HYG86_17610 PF00575 S1 RNA binding domain HYG86_17610 PF08529 NusA N-terminal domain HYG86_17610 PF13184 NusA-like KH domain HYG86_17615 PF04296 Protein of unknown function (DUF448) HYG86_17620 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HYG86_17625 PF04760 Translation initiation factor IF-2, N-terminal region HYG86_17625 PF11987 Translation-initiation factor 2 HYG86_17625 PF00009 Elongation factor Tu GTP binding domain HYG86_17630 PF02033 Ribosome-binding factor A HYG86_17640 PF01509 TruB family pseudouridylate synthase (N terminal domain) HYG86_17640 PF16198 tRNA pseudouridylate synthase B C-terminal domain HYG86_17645 PF01687 Riboflavin kinase HYG86_17645 PF06574 FAD synthetase HYG86_17650 PF00312 Ribosomal protein S15 HYG86_17655 PF03725 3' exoribonuclease family, domain 2 HYG86_17655 PF00013 KH domain HYG86_17655 PF01138 3' exoribonuclease family, domain 1 HYG86_17655 PF00575 S1 RNA binding domain HYG86_17655 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HYG86_17660 PF01522 Polysaccharide deacetylase HYG86_17670 PF05239 PRC-barrel domain HYG86_17680 PF16924 Dipicolinate synthase subunit A N-terminal domain HYG86_17680 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HYG86_17685 PF02441 Flavoprotein HYG86_17690 PF02774 Semialdehyde dehydrogenase, dimerisation domain HYG86_17690 PF01118 Semialdehyde dehydrogenase, NAD binding domain HYG86_17695 PF00696 Amino acid kinase family HYG86_17695 PF13840 ACT domain HYG86_17700 PF00701 Dihydrodipicolinate synthetase family HYG86_17710 PF01230 HIT domain HYG86_17720 PF00753 Metallo-beta-lactamase superfamily HYG86_17720 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HYG86_17720 PF17770 Ribonuclease J C-terminal domain HYG86_17725 PF00574 Clp protease HYG86_17735 PF02673 Bacitracin resistance protein BacA HYG86_17740 PF09397 Ftsk gamma domain HYG86_17740 PF01580 FtsK/SpoIIIE family HYG86_17740 PF17854 FtsK alpha domain HYG86_17740 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HYG86_17745 PF07702 UTRA domain HYG86_17745 PF00392 Bacterial regulatory proteins, gntR family HYG86_17750 PF02608 ABC transporter substrate-binding protein PnrA-like HYG86_17755 PF00005 ABC transporter HYG86_17760 PF02653 Branched-chain amino acid transport system / permease component HYG86_17765 PF02653 Branched-chain amino acid transport system / permease component HYG86_17770 PF13411 MerR HTH family regulatory protein HYG86_17775 PF03951 Glutamine synthetase, beta-Grasp domain HYG86_17775 PF00120 Glutamine synthetase, catalytic domain HYG86_17780 PF11868 Protein of unknown function (DUF3388) HYG86_17790 PF00919 Uncharacterized protein family UPF0004 HYG86_17790 PF18693 TRAM domain HYG86_17790 PF04055 Radical SAM superfamily HYG86_17795 PF01066 CDP-alcohol phosphatidyltransferase HYG86_17805 PF01434 Peptidase family M41 HYG86_17805 PF00004 ATPase family associated with various cellular activities (AAA) HYG86_17805 PF06480 FtsH Extracellular HYG86_17805 PF17862 AAA+ lid domain HYG86_17810 PF00994 Probable molybdopterin binding domain HYG86_17810 PF18146 Damage-inducible protein CinA KH domain HYG86_17810 PF02464 Competence-damaged protein HYG86_17820 PF00154 recA bacterial DNA recombination protein HYG86_17825 PF02631 RecX family HYG86_17835 PF02463 RecF/RecN/SMC N terminal domain HYG86_17850 PF12072 Domain of unknown function (DUF3552) HYG86_17850 PF00013 KH domain HYG86_17850 PF01966 HD domain HYG86_17855 PF13277 YmdB-like protein HYG86_17860 PF04232 Stage V sporulation protein S (SpoVS) HYG86_17865 PF01244 Membrane dipeptidase (Peptidase family M19) HYG86_17870 PF02811 PHP domain HYG86_17875 PF00392 Bacterial regulatory proteins, gntR family HYG86_17875 PF07729 FCD domain HYG86_17885 PF06130 Phosphate propanoyltransferase HYG86_17895 PF02424 ApbE family HYG86_17900 PF04055 Radical SAM superfamily HYG86_17900 PF01938 TRAM domain HYG86_17900 PF00919 Uncharacterized protein family UPF0004 HYG86_17905 PF00488 MutS domain V HYG86_17905 PF05190 MutS family domain IV HYG86_17905 PF05192 MutS domain III HYG86_17905 PF05188 MutS domain II HYG86_17905 PF01624 MutS domain I HYG86_17910 PF08676 MutL C terminal dimerisation domain HYG86_17910 PF01119 DNA mismatch repair protein, C-terminal domain HYG86_17915 PF04445 Putative SAM-dependent methyltransferase HYG86_17925 PF17209 Hfq protein HYG86_17930 PF00004 ATPase family associated with various cellular activities (AAA) HYG86_17930 PF17866 AAA lid domain HYG86_17935 PF10396 GTP-binding protein TrmE N-terminus HYG86_17935 PF01926 50S ribosome-binding GTPase HYG86_17935 PF12631 MnmE helical domain HYG86_17950 PF06838 Methionine gamma-lyase HYG86_17960 PF00717 Peptidase S24-like HYG86_17960 PF01726 LexA DNA binding domain HYG86_17970 PF00239 Resolvase, N terminal domain HYG86_18025 PF05343 M42 glutamyl aminopeptidase HYG86_18030 PF00890 FAD binding domain HYG86_18030 PF14537 Cytochrome c3 HYG86_18035 PF01312 FlhB HrpN YscU SpaS Family HYG86_18050 PF02743 Cache domain HYG86_18050 PF00672 HAMP domain HYG86_18050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG86_18055 PF02368 Bacterial Ig-like domain (group 2) HYG86_18060 PF01520 N-acetylmuramoyl-L-alanine amidase HYG86_18065 PF03806 AbgT putative transporter family HYG86_18075 PF03023 Lipid II flippase MurJ HYG86_18080 PF00291 Pyridoxal-phosphate dependent enzyme HYG86_18085 PF03372 Endonuclease/Exonuclease/phosphatase family HYG86_18095 PF00912 Transglycosylase HYG86_18095 PF00905 Penicillin binding protein transpeptidase domain HYG86_18100 PF13614 AAA domain HYG86_18110 PF00183 Hsp90 protein HYG86_18115 PF12826 Helix-hairpin-helix motif HYG86_18115 PF02151 UvrB/uvrC motif HYG86_18115 PF01541 GIY-YIG catalytic domain HYG86_18115 PF08459 UvrC Helix-hairpin-helix N-terminal HYG86_18135 PF08486 Stage II sporulation protein