Amet_0001 PF00308 Bacterial dnaA protein Amet_0001 PF08299 Bacterial dnaA protein helix-turn-helix Amet_0001 PF11638 DnaA N-terminal domain Amet_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Amet_0002 PF02767 DNA polymerase III beta subunit, central domain Amet_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Amet_0003 PF13275 S4 domain Amet_0004 PF02463 RecF/RecN/SMC N terminal domain Amet_0005 PF04025 Amet_0005 Amet_0006 PF00204 DNA gyrase B Amet_0006 PF00986 DNA gyrase B subunit, carboxyl terminus Amet_0006 PF01751 Toprim domain Amet_0006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_0007 PF00521 DNA gyrase/topoisomerase IV, subunit A Amet_0007 PF03989 DNA gyrase C-terminal domain, beta-propeller Amet_0008 PF01740 STAS domain Amet_0009 PF13581 Histidine kinase-like ATPase domain Amet_0010 PF04539 Sigma-70 region 3 Amet_0010 PF04542 Sigma-70 region 2 Amet_0010 PF04545 Sigma-70, region 4 Amet_0013 PF06177 Amet_0013 Amet_0014 PF14505 Domain of unknown function (DUF4438) Amet_0015 PF02347 Glycine cleavage system P-protein Amet_0016 PF02347 Glycine cleavage system P-protein Amet_0017 PF02445 Quinolinate synthetase A protein Amet_0018 PF00890 FAD binding domain Amet_0018 PF02910 Fumarate reductase flavoprotein C-term Amet_0019 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Amet_0019 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Amet_0020 PF02829 3H domain Amet_0020 PF08279 HTH domain Amet_0021 PF13303 Amet_0021 Amet_0022 PF03699 Amet_0022 Amet_0024 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amet_0024 PF02403 Seryl-tRNA synthetase N-terminal domain Amet_0026 PF14437 Amet_0026 Amet_0027 PF01206 Sulfurtransferase TusA Amet_0028 PF11823 Amet_0028 Amet_0029 PF00924 Mechanosensitive ion channel Amet_0030 PF06107 Amet_0030 Amet_0031 PF00155 Aminotransferase class I and II Amet_0032 PF01250 Ribosomal protein S6 Amet_0033 PF00436 Single-strand binding protein family Amet_0034 PF01084 Ribosomal protein S18 Amet_0035 PF07907 Amet_0035 Amet_0037 PF01386 Ribosomal L25p family Amet_0037 PF14693 Ribosomal protein TL5, C-terminal domain Amet_0038 PF01386 Ribosomal L25p family Amet_0038 PF14693 Ribosomal protein TL5, C-terminal domain Amet_0039 PF01546 Peptidase family M20/M25/M40 Amet_0039 PF07687 Peptidase dimerisation domain Amet_0040 PF03606 Amet_0040 Amet_0041 PF07969 Amidohydrolase family Amet_0042 PF07687 Peptidase dimerisation domain Amet_0043 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_0043 PF02743 Cache domain Amet_0044 PF02583 Metal-sensitive transcriptional repressor Amet_0045 PF00403 Heavy-metal-associated domain Amet_0046 PF02618 YceG-like family Amet_0047 PF00899 ThiF family Amet_0048 PF09335 Amet_0048 Amet_0050 PF13404 AsnC-type helix-turn-helix domain Amet_0051 PF04055 Radical SAM superfamily Amet_0051 PF13186 Iron-sulfur cluster-binding domain Amet_0051 PF13353 4Fe-4S single cluster domain Amet_0052 PF04055 Radical SAM superfamily Amet_0052 PF13353 4Fe-4S single cluster domain Amet_0053 PF03601 Amet_0053 Amet_0055 PF01206 Sulfurtransferase TusA Amet_0056 PF00291 Pyridoxal-phosphate dependent enzyme Amet_0057 PF01053 Cys/Met metabolism PLP-dependent enzyme Amet_0058 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Amet_0058 PF01488 Shikimate / quinate 5-dehydrogenase Amet_0058 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Amet_0059 PF13241 Putative NAD(P)-binding Amet_0059 PF14824 Sirohaem biosynthesis protein central Amet_0060 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Amet_0060 PF03900 Porphobilinogen deaminase, C-terminal domain Amet_0061 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Amet_0061 PF02602 Uroporphyrinogen-III synthase HemD Amet_0062 PF00490 Delta-aminolevulinic acid dehydratase Amet_0063 PF00202 Aminotransferase class-III Amet_0064 PF01903 CbiX Amet_0065 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_0065 PF07685 CobB/CobQ-like glutamine amidotransferase domain Amet_0066 PF12822 Protein of unknown function (DUF3816) Amet_0067 PF00586 AIR synthase related protein, N-terminal domain Amet_0068 PF00288 GHMP kinases N terminal domain Amet_0069 PF02570 Precorrin-8X methylmutase Amet_0070 PF01888 CbiD Amet_0071 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Amet_0072 PF13847 Methyltransferase domain Amet_0073 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Amet_0074 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Amet_0075 PF01890 Cobalamin synthesis G C-terminus Amet_0075 PF11760 Cobalamin synthesis G N-terminal Amet_0075 PF11761 Amet_0075 Amet_0076 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Amet_0077 PF02571 Amet_0077 Amet_0079 PF10764 Amet_0079 Amet_0081 PF01276 Orn/Lys/Arg decarboxylase, major domain Amet_0081 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Amet_0082 PF02223 Thymidylate kinase Amet_0083 PF06153 Protein of unknown function (DUF970) Amet_0084 PF13177 DNA polymerase III, delta subunit Amet_0085 PF04468 Amet_0085 Amet_0086 PF00578 AhpC/TSA family Amet_0087 PF04542 Sigma-70 region 2 Amet_0088 PF12791 Amet_0088 Amet_0090 PF05175 Methyltransferase small domain Amet_0091 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Amet_0092 PF04014 Antidote-toxin recognition MazE Amet_0093 PF01743 Poly A polymerase head domain Amet_0093 PF01966 HD domain Amet_0093 PF12627 Probable RNA and SrmB- binding site of polymerase A Amet_0094 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Amet_0095 PF07670 Nucleoside recognition Amet_0096 PF07670 Nucleoside recognition Amet_0097 PF03576 Peptidase family S58 Amet_0098 PF04647 Amet_0098 Amet_0099 PF09683 Bacteriocin (Lactococcin_972) Amet_0101 PF00005 ABC transporter Amet_0102 PF14501 GHKL domain Amet_0102 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Amet_0103 PF00072 Response regulator receiver domain Amet_0103 PF04397 LytTr DNA-binding domain Amet_0108 PF04542 Sigma-70 region 2 Amet_0108 PF08281 Sigma-70, region 4 Amet_0110 PF00133 tRNA synthetases class I (I, L, M and V) Amet_0110 PF01588 Putative tRNA binding domain Amet_0110 PF08264 Anticodon-binding domain of tRNA Amet_0110 PF09334 tRNA synthetases class I (M) Amet_0111 PF01026 TatD related DNase Amet_0114 PF01797 Transposase IS200 like Amet_0116 PF05717 Amet_0116 Amet_0117 PF03050 Amet_0117 Amet_0117 PF13005 Amet_0117 Amet_0117 PF13007 Amet_0117 Amet_0117 PF13817 Amet_0117 Amet_0118 PF01609 Transposase DDE domain Amet_0124 PF04647 Amet_0124 Amet_0127 PF01797 Transposase IS200 like Amet_0129 PF01022 Bacterial regulatory protein, arsR family Amet_0130 PF00122 E1-E2 ATPase Amet_0130 PF00403 Heavy-metal-associated domain Amet_0130 PF00702 haloacid dehalogenase-like hydrolase Amet_0131 PF03851 UV-endonuclease UvdE Amet_0131 PF08349 Amet_0131 Amet_0132 PF00392 Bacterial regulatory proteins, gntR family Amet_0133 PF00005 ABC transporter Amet_0135 PF00188 Cysteine-rich secretory protein family Amet_0135 PF14504 CAP-associated N-terminal Amet_0136 PF03990 Amet_0136 Amet_0136 PF06725 3D domain Amet_0136 PF07501 G5 domain Amet_0137 PF13331 Amet_0137 Amet_0137 PF13662 Toprim domain Amet_0138 PF00398 Ribosomal RNA adenine dimethylase Amet_0140 PF01699 Sodium/calcium exchanger protein Amet_0141 PF00581 Rhodanese-like domain Amet_0143 PF14034 Amet_0143 Amet_0145 PF11385 Amet_0145 Amet_0146 PF03806 Amet_0146 Amet_0147 PF03806 Amet_0147 Amet_0148 PF01546 Peptidase family M20/M25/M40 Amet_0148 PF07687 Peptidase dimerisation domain Amet_0149 PF01276 Orn/Lys/Arg decarboxylase, major domain Amet_0149 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Amet_0152 PF03816 Cell envelope-related transcriptional attenuator domain Amet_0153 PF01225 Mur ligase family, catalytic domain Amet_0153 PF02875 Mur ligase family, glutamate ligase domain Amet_0153 PF08245 Mur ligase middle domain Amet_0154 PF00156 Phosphoribosyl transferase domain Amet_0154 PF09182 Bacterial purine repressor, N-terminal Amet_0155 PF04026 SpoVG Amet_0156 PF00132 Bacterial transferase hexapeptide (six repeats) Amet_0156 PF12804 MobA-like NTP transferase domain Amet_0156 PF14602 Hexapeptide repeat of succinyl-transferase Amet_0157 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Amet_0157 PF14572 Phosphoribosyl synthetase-associated domain Amet_0158 PF01195 Peptidyl-tRNA hydrolase Amet_0160 PF00270 DEAD/DEAH box helicase Amet_0160 PF00271 Helicase conserved C-terminal domain Amet_0160 PF02559 CarD-like/TRCF domain Amet_0160 PF03461 TRCF domain Amet_0161 PF13616 PPIC-type PPIASE domain Amet_0161 PF13624 SurA N-terminal domain Amet_0162 PF04014 Antidote-toxin recognition MazE Amet_0162 PF15714 Amet_0162 Amet_0163 PF01943 Amet_0163 Amet_0163 PF14667 Polysaccharide biosynthesis C-terminal domain Amet_0164 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Amet_0164 PF03819 MazG nucleotide pyrophosphohydrolase domain Amet_0165 PF00216 Bacterial DNA-binding protein Amet_0166 PF01479 S4 domain Amet_0168 PF08486 Amet_0168 Amet_0169 PF07873 YabP family Amet_0170 PF09578 Amet_0170 Amet_0171 PF04977 Septum formation initiator Amet_0172 PF00575 S1 RNA binding domain Amet_0173 PF07228 Stage II sporulation protein E (SpoIIE) Amet_0174 PF12844 Helix-turn-helix domain Amet_0175 PF01381 Helix-turn-helix Amet_0177 PF01471 Putative peptidoglycan binding domain Amet_0177 PF03572 Peptidase family S41 Amet_0177 PF13180 PDZ domain Amet_0178 PF00395 S-layer homology domain Amet_0180 PF01833 IPT/TIG domain Amet_0181 PF00395 S-layer homology domain Amet_0182 PF00395 S-layer homology domain Amet_0183 PF00117 Glutamine amidotransferase class-I Amet_0183 PF06418 CTP synthase N-terminus Amet_0184 PF07833 Copper amine oxidase N-terminal domain Amet_0185 PF07833 Copper amine oxidase N-terminal domain Amet_0186 PF02321 Outer membrane efflux protein Amet_0187 PF16576 Amet_0187 Amet_0188 PF00873 AcrB/AcrD/AcrF family Amet_0189 PF00440 Bacterial regulatory proteins, tetR family Amet_0190 PF00932 Lamin Tail Domain Amet_0190 PF08757 Amet_0190 Amet_0190 PF13287 Amet_0190 Amet_0191 PF00395 S-layer homology domain Amet_0192 PF02706 Chain length determinant protein Amet_0192 PF13807 Amet_0192 Amet_0193 PF04932 Amet_0193 Amet_0194 PF13412 Winged helix-turn-helix DNA-binding Amet_0195 PF08780 Nucleotidyltransferase substrate binding protein like Amet_0198 PF07963 Prokaryotic N-terminal methylation motif Amet_0201 PF02397 Amet_0201 Amet_0202 PF07940 Heparinase II/III-like protein Amet_0202 PF16889 Amet_0202 Amet_0203 PF00534 Glycosyl transferases group 1 Amet_0203 PF13439 Glycosyltransferase Family 4 Amet_0204 PF13460 NADH(P)-binding Amet_0205 PF00534 Glycosyl transferases group 1 Amet_0205 PF13477 Glycosyl transferase 4-like Amet_0206 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Amet_0206 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Amet_0206 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Amet_0207 PF02350 UDP-N-acetylglucosamine 2-epimerase Amet_0208 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Amet_0209 PF00534 Glycosyl transferases group 1 Amet_0209 PF13439 Glycosyltransferase Family 4 Amet_0210 PF04932 Amet_0210 Amet_0211 PF04230 Amet_0211 Amet_0212 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Amet_0212 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus Amet_0212 PF12838 4Fe-4S dicluster domain Amet_0214 PF03023 Amet_0214 Amet_0215 PF14134 Amet_0215 Amet_0216 PF01797 Transposase IS200 like Amet_0217 PF03816 Cell envelope-related transcriptional attenuator domain Amet_0218 PF04754 Amet_0218 Amet_0220 PF01078 Magnesium chelatase, subunit ChlI Amet_0220 PF13335 Amet_0220 Amet_0220 PF13541 Subunit ChlI of Mg-chelatase Amet_0221 PF02481 DNA recombination-mediator protein A Amet_0221 PF14520 Helix-hairpin-helix domain Amet_0222 PF04326 Divergent AAA domain Amet_0222 PF13749 ATP-dependent DNA helicase recG C-terminal Amet_0224 PF13086 AAA domain Amet_0224 PF13087 AAA domain Amet_0225 PF00158 Sigma-54 interaction domain Amet_0225 PF00989 PAS fold Amet_0225 PF06506 Propionate catabolism activator Amet_0226 PF07005 Protein of unknown function, DUF1537 Amet_0226 PF17042 Amet_0226 Amet_0227 PF00465 Iron-containing alcohol dehydrogenase Amet_0228 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Amet_0229 PF00701 Dihydrodipicolinate synthetase family Amet_0230 PF16868 Amet_0230 Amet_0231 PF06808 Amet_0231 Amet_0232 PF07929 Plasmid pRiA4b ORF-3-like protein Amet_0234 PF00005 ABC transporter Amet_0235 PF01061 Amet_0235 Amet_0237 PF13304 AAA domain Amet_0241 PF12773 Amet_0241 Amet_0243 PF07929 Plasmid pRiA4b ORF-3-like protein Amet_0246 PF13546 Amet_0246 Amet_0247 PF13690 Chemotaxis phosphatase CheX Amet_0248 PF00072 Response regulator receiver domain Amet_0248 PF13690 Chemotaxis phosphatase CheX Amet_0249 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_0249 PF00672 HAMP domain Amet_0249 PF02743 Cache domain Amet_0250 PF00936 BMC domain Amet_0251 PF10662 Ethanolamine utilisation - propanediol utilisation Amet_0252 PF00072 Response regulator receiver domain Amet_0252 PF03861 ANTAR domain Amet_0253 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_0253 PF07568 Amet_0253 Amet_0253 PF12282 Signal transduction histidine kinase Amet_0254 PF06277 Ethanolamine utilisation protein EutA Amet_0255 PF06751 Ethanolamine ammonia lyase large subunit (EutB) Amet_0256 PF05985 Ethanolamine ammonia-lyase light chain (EutC) Amet_0257 PF00936 BMC domain Amet_0258 PF00936 BMC domain Amet_0259 PF00171 Aldehyde dehydrogenase family Amet_0260 PF00936 BMC domain Amet_0261 PF01923 Cobalamin adenosyltransferase Amet_0262 PF06130 Amet_0262 Amet_0263 PF11104 Type IV pilus assembly protein PilM; Amet_0265 PF03319 Ethanolamine utilisation protein EutN/carboxysome Amet_0266 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Amet_0266 PF10531 SLBB domain Amet_0266 PF13375 RnfC Barrel sandwich hybrid domain Amet_0266 PF13534 4Fe-4S dicluster domain Amet_0267 PF00936 BMC domain Amet_0268 PF04346 Amet_0268 Amet_0269 PF00465 Iron-containing alcohol dehydrogenase Amet_0270 PF14278 Amet_0270 Amet_0271 PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family Amet_0277 PF02719 Polysaccharide biosynthesis protein Amet_0277 PF13727 CoA-binding domain Amet_0278 PF06695 Amet_0278 Amet_0282 PF16576 Amet_0282 Amet_0283 PF00873 AcrB/AcrD/AcrF family Amet_0284 PF01025 GrpE Amet_0285 PF00012 Hsp70 protein Amet_0286 PF13432 Tetratricopeptide repeat Amet_0287 PF00226 DnaJ domain Amet_0287 PF02810 SEC-C motif Amet_0287 PF13181 Tetratricopeptide repeat Amet_0288 PF00072 Response regulator receiver domain Amet_0288 PF00486 Transcriptional regulatory protein, C terminal Amet_0289 PF00512 His Kinase A (phospho-acceptor) domain Amet_0289 PF00672 HAMP domain Amet_0289 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_0292 PF06262 Possibl zinc metallo-peptidase Amet_0293 PF00395 S-layer homology domain Amet_0294 PF14278 Amet_0294 Amet_0295 PF00483 Nucleotidyl transferase Amet_0296 PF01618 Amet_0296 Amet_0297 PF00691 OmpA family Amet_0297 PF13677 Amet_0297 Amet_0298 PF00395 S-layer homology domain Amet_0299 PF13181 Tetratricopeptide repeat Amet_0300 PF13711 Amet_0300 Amet_0301 PF10387 Protein of unknown function (DUF2442) Amet_0302 PF01370 NAD dependent epimerase/dehydratase family Amet_0303 PF13231 Amet_0303 Amet_0304 PF01609 Transposase DDE domain Amet_0306 PF00535 Glycosyl transferase family 2 Amet_0307 PF04138 Amet_0307 Amet_0308 PF09359 VTC domain Amet_0309 PF16316 Amet_0309 Amet_0310 PF08757 Amet_0310 Amet_0311 PF01757 Amet_0311 Amet_0312 PF16576 Amet_0312 Amet_0314 PF00440 Bacterial regulatory proteins, tetR family Amet_0314 PF08359 YsiA-like protein, C-terminal region Amet_0315 PF00209 Sodium:neurotransmitter symporter family Amet_0316 PF00072 Response regulator receiver domain Amet_0317 PF03061 Thioesterase superfamily Amet_0318 PF05853 Prokaryotic protein of unknown function (DUF849) Amet_0319 PF00923 Transaldolase Amet_0320 PF00561 alpha/beta hydrolase fold Amet_0321 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Amet_0322 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Amet_0323 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amet_0323 PF07497 Rho termination factor, RNA-binding domain Amet_0323 PF07498 Rho termination factor, N-terminal domain Amet_0324 PF01197 Ribosomal protein L31 Amet_0325 PF00265 Thymidine kinase Amet_0326 PF13411 MerR HTH family regulatory protein Amet_0327 PF00890 FAD binding domain Amet_0327 PF04205 FMN-binding domain Amet_0327 PF12831 FAD dependent oxidoreductase Amet_0330 PF05175 Methyltransferase small domain Amet_0331 PF00472 RF-1 domain Amet_0331 PF03462 PCRF domain Amet_0332 PF02535 Amet_0332 Amet_0333 PF00498 FHA domain Amet_0334 PF01098 Amet_0334 Amet_0335 PF00905 Penicillin binding protein transpeptidase domain Amet_0336 PF01300 Telomere recombination Amet_0336 PF03481 Putative GTP-binding controlling metal-binding Amet_0337 PF01451 Low molecular weight phosphotyrosine protein phosphatase Amet_0338 PF02502 Ribose/Galactose Isomerase Amet_0339 PF14681 Uracil phosphoribosyltransferase Amet_0340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Amet_0341 PF00953 Glycosyl transferase family 4 Amet_0342 PF00209 Sodium:neurotransmitter symporter family Amet_0343 PF02350 UDP-N-acetylglucosamine 2-epimerase Amet_0344 PF09527 Amet_0344 Amet_0345 PF03899 Amet_0345 Amet_0346 PF00119 ATP synthase A chain Amet_0347 PF00137 ATP synthase subunit C Amet_0348 PF00137 ATP synthase subunit C Amet_0349 PF00430 ATP synthase B/B' CF(0) Amet_0350 PF00213 ATP synthase delta (OSCP) subunit Amet_0351 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amet_0351 PF00306 ATP synthase alpha/beta chain, C terminal domain Amet_0351 PF02874 ATP synthase alpha/beta family, beta-barrel domain Amet_0352 PF00231 ATP synthase Amet_0353 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amet_0353 PF02874 ATP synthase alpha/beta family, beta-barrel domain Amet_0354 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Amet_0354 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Amet_0355 PF07009 Protein of unknown function (DUF1312) Amet_0356 PF07997 Protein of unknown function (DUF1694) Amet_0357 PF08680 Protein of unknown function (DUF1779) Amet_0358 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Amet_0359 PF08486 Amet_0359 Amet_0360 PF01551 Peptidase family M23 Amet_0361 PF00440 Bacterial regulatory proteins, tetR family Amet_0362 PF16576 Amet_0362 Amet_0363 PF00873 AcrB/AcrD/AcrF family Amet_0364 PF12116 Stage III sporulation protein D Amet_0365 PF06723 MreB/Mbl protein Amet_0366 PF00005 ABC transporter Amet_0368 PF02687 Amet_0368 Amet_0368 PF12704 MacB-like periplasmic core domain Amet_0369 PF00460 Flagella basal body rod protein Amet_0369 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Amet_0370 PF00460 Flagella basal body rod protein Amet_0370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Amet_0371 PF10135 Amet_0371 Amet_0372 PF07977 FabA-like domain Amet_0373 PF01797 Transposase IS200 like Amet_0374 PF04018 Amet_0374 Amet_0375 PF00483 Nucleotidyl transferase Amet_0377 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Amet_0378 PF05016 Plasmid stabilisation system protein Amet_0381 PF00392 Bacterial regulatory proteins, gntR family Amet_0381 PF07729 FCD domain Amet_0383 PF01381 Helix-turn-helix Amet_0383 PF12844 Helix-turn-helix domain Amet_0386 PF09299 Mu transposase, C-terminal Amet_0388 PF02914 Bacteriophage Mu transposase Amet_0388 PF09299 Mu transposase, C-terminal Amet_0389 PF13401 AAA domain Amet_0393 PF04014 Antidote-toxin recognition MazE Amet_0395 PF06252 Amet_0395 Amet_0398 PF04542 Sigma-70 region 2 Amet_0398 PF13384 Homeodomain-like domain Amet_0406 PF06725 3D domain Amet_0407 PF09992 Predicted periplasmic protein (DUF2233) Amet_0408 PF01520 N-acetylmuramoyl-L-alanine amidase Amet_0409 PF08765 Mor transcription activator family Amet_0413 PF11985 Amet_0413 Amet_0414 PF00467 KOW motif Amet_0414 PF02357 Transcription termination factor nusG Amet_0416 PF06381 Amet_0416 Amet_0417 PF04233 Amet_0417 Amet_0418 PF09979 Amet_0418 Amet_0420 PF09950 Amet_0420 Amet_0422 PF13262 Amet_0422 Amet_0426 PF11863 Amet_0426 Amet_0430 PF10145 Amet_0430 Amet_0436 PF04865 Amet_0436 Amet_0440 PF09693 Amet_0440 Amet_0442 PF01012 Electron transfer flavoprotein domain Amet_0443 PF00766 Electron transfer flavoprotein FAD-binding domain Amet_0443 PF01012 Electron transfer flavoprotein domain Amet_0445 PF01565 FAD binding domain Amet_0445 PF02913 FAD linked oxidases, C-terminal domain Amet_0447 PF12668 Amet_0447 Amet_0449 PF01609 Transposase DDE domain Amet_0452 PF00226 DnaJ domain Amet_0453 PF04892 Amet_0453 Amet_0454 PF00117 Glutamine amidotransferase class-I Amet_0455 PF00356 Bacterial regulatory proteins, lacI family Amet_0455 PF13377 Periplasmic binding protein-like domain Amet_0456 PF13407 Periplasmic binding protein domain Amet_0457 PF00005 ABC transporter Amet_0458 PF02653 Amet_0458 Amet_0459 PF01261 Xylose isomerase-like TIM barrel Amet_0459 PF07582 AP endonuclease family 2 C terminus Amet_0460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Amet_0460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Amet_0462 PF12146 Putative lysophospholipase Amet_0463 PF03690 Amet_0463 Amet_0464 PF02277 Phosphoribosyltransferase Amet_0465 PF00860 Permease family Amet_0466 PF05598 Amet_0466 Amet_0467 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_0470 PF00941 FAD binding domain in molybdopterin dehydrogenase Amet_0470 PF03450 CO dehydrogenase flavoprotein C-terminal domain Amet_0471 PF00111 2Fe-2S iron-sulfur cluster binding domain Amet_0471 PF01799 [2Fe-2S] binding domain Amet_0472 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Amet_0472 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Amet_0474 PF12986 Domain of unknown function (DUF3870) Amet_0475 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Amet_0475 PF13378 Enolase C-terminal domain-like Amet_0476 PF02016 LD-carboxypeptidase Amet_0477 PF01244 Membrane dipeptidase (Peptidase family M19) Amet_0478 PF00376 MerR family regulatory protein Amet_0479 PF00890 FAD binding domain Amet_0479 PF04205 FMN-binding domain Amet_0480 PF00731 AIR carboxylase Amet_0481 PF01969 Protein of unknown function DUF111 Amet_0482 PF00764 Arginosuccinate synthase Amet_0483 PF01546 Peptidase family M20/M25/M40 Amet_0484 PF00549 CoA-ligase Amet_0484 PF08442 ATP-grasp domain Amet_0485 PF00549 CoA-ligase Amet_0485 PF02629 CoA binding domain Amet_0486 PF01618 Amet_0486 Amet_0487 PF00691 OmpA family Amet_0488 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_0488 PF07730 Histidine kinase Amet_0489 PF00072 Response regulator receiver domain Amet_0489 PF00196 Bacterial regulatory proteins, luxR family Amet_0492 PF00717 Peptidase S24-like Amet_0495 PF17231 Amet_0495 Amet_0496 PF00395 S-layer homology domain Amet_0498 PF01554 MatE Amet_0500 PF01614 Bacterial transcriptional regulator Amet_0500 PF09339 IclR helix-turn-helix domain Amet_0501 PF02447 Amet_0501 Amet_0502 PF00920 Dehydratase family Amet_0503 PF01557 Fumarylacetoacetate (FAA) hydrolase family Amet_0504 PF00155 Aminotransferase class I and II Amet_0505 PF03328 HpcH/HpaI aldolase/citrate lyase family Amet_0506 PF01228 Glycine radical Amet_0506 PF02901 Pyruvate formate lyase Amet_0507 PF04055 Radical SAM superfamily Amet_0507 PF13353 4Fe-4S single cluster domain Amet_0509 PF00291 Pyridoxal-phosphate dependent enzyme Amet_0510 PF00202 Aminotransferase class-III Amet_0511 PF00199 Catalase Amet_0511 PF01965 DJ-1/PfpI family Amet_0511 PF06628 Catalase-related immune-responsive Amet_0512 PF05504 Spore germination B3/ GerAC like, C-terminal Amet_0513 PF03845 Amet_0513 Amet_0514 PF03323 Amet_0514 Amet_0515 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein Amet_0516 PF00005 ABC transporter Amet_0517 PF00528 Binding-protein-dependent transport system inner membrane component Amet_0519 PF00005 ABC transporter Amet_0521 PF00183 Hsp90 protein Amet_0521 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_0523 PF01891 Cobalt uptake substrate-specific transmembrane region Amet_0524 PF02361 Cobalt transport protein Amet_0525 PF00005 ABC transporter Amet_0527 PF01966 HD domain Amet_0528 PF01784 NIF3 (NGG1p interacting factor 3) Amet_0529 PF09922 Cell wall-active antibiotics response protein (DUF2154) Amet_0530 PF08291 Peptidase M15 Amet_0531 PF00300 Histidine phosphatase superfamily (branch 1) Amet_0532 PF01906 Putative heavy-metal-binding Amet_0534 PF03795 YCII-related domain Amet_0535 PF10648 Amet_0535 Amet_0535 PF14343 Amet_0535 Amet_0537 PF00753 Metallo-beta-lactamase superfamily Amet_0538 PF09861 Domain of unknown function (DUF2088) Amet_0540 PF00291 Pyridoxal-phosphate dependent enzyme Amet_0541 PF01471 Putative peptidoglycan binding domain Amet_0541 PF01476 LysM domain Amet_0542 PF00149 Calcineurin-like phosphoesterase Amet_0542 PF01476 LysM domain Amet_0542 PF02872 5'-nucleotidase, C-terminal domain Amet_0543 PF07907 Amet_0543 Amet_0544 PF02311 AraC-like ligand binding domain Amet_0544 PF12833 Helix-turn-helix domain Amet_0545 PF01554 MatE Amet_0546 PF00072 Response regulator receiver domain Amet_0546 PF00486 Transcriptional regulatory protein, C terminal Amet_0547 PF00512 His Kinase A (phospho-acceptor) domain Amet_0547 PF00672 HAMP domain Amet_0547 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_0549 PF00882 Zinc dependent phospholipase C Amet_0550 PF03480 Bacterial extracellular solute-binding protein, family 7 Amet_0551 PF04290 Amet_0551 Amet_0552 PF06808 Amet_0552 Amet_0553 PF00392 Bacterial regulatory proteins, gntR family Amet_0553 PF07729 FCD domain Amet_0554 PF00107 Zinc-binding dehydrogenase Amet_0554 PF08240 Alcohol dehydrogenase GroES-like domain Amet_0555 PF01232 Mannitol dehydrogenase Rossmann domain Amet_0555 PF08125 Mannitol dehydrogenase C-terminal domain Amet_0556 PF04295 Amet_0556 Amet_0556 PF08666 SAF domain Amet_0557 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Amet_0557 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Amet_0558 PF03480 Bacterial extracellular solute-binding protein, family 7 Amet_0559 PF04290 Amet_0559 Amet_0560 PF06808 Amet_0560 Amet_0561 PF03009 Glycerophosphoryl diester phosphodiesterase family Amet_0562 PF04309 Glycerol-3-phosphate responsive antiterminator Amet_0563 PF02308 Amet_0563 Amet_0564 PF09861 Domain of unknown function (DUF2088) Amet_0566 PF00742 Homoserine dehydrogenase Amet_0566 PF01842 ACT domain Amet_0566 PF03447 Homoserine dehydrogenase, NAD binding domain Amet_0567 PF00291 Pyridoxal-phosphate dependent enzyme Amet_0568 PF00288 GHMP kinases N terminal domain Amet_0569 PF00381 PTS HPr component phosphorylation site Amet_0570 PF13393 Histidyl-tRNA synthetase Amet_0571 PF01634 ATP phosphoribosyltransferase Amet_0572 PF00815 Histidinol dehydrogenase Amet_0573 PF00155 Aminotransferase class I and II Amet_0574 PF00475 Imidazoleglycerol-phosphate dehydratase Amet_0575 PF00117 Glutamine amidotransferase class-I Amet_0576 PF00977 Histidine biosynthesis protein Amet_0577 PF00977 Histidine biosynthesis protein Amet_0578 PF01502 Phosphoribosyl-AMP cyclohydrolase Amet_0578 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Amet_0579 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Amet_0579 PF00364 Biotin-requiring enzyme Amet_0579 PF00682 HMGL-like Amet_0579 PF02436 Conserved carboxylase domain Amet_0579 PF02785 Biotin carboxylase C-terminal domain Amet_0579 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Amet_0580 PF00209 Sodium:neurotransmitter symporter family Amet_0582 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_0582 PF17201 Amet_0582 Amet_0583 PF04055 Radical SAM superfamily Amet_0583 PF13353 4Fe-4S single cluster domain Amet_0584 PF01228 Glycine radical Amet_0584 PF02901 Pyruvate formate lyase Amet_0585 PF03372 Endonuclease/Exonuclease/phosphatase family Amet_0586 PF00356 Bacterial regulatory proteins, lacI family Amet_0586 PF13377 Periplasmic binding protein-like domain Amet_0587 PF00005 ABC transporter Amet_0588 PF02653 Amet_0588 Amet_0589 PF13407 Periplasmic binding protein domain Amet_0590 PF00107 Zinc-binding dehydrogenase Amet_0590 PF08240 Alcohol dehydrogenase GroES-like domain Amet_0591 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Amet_0591 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Amet_0592 PF00291 Pyridoxal-phosphate dependent enzyme Amet_0593 PF00881 Nitroreductase family Amet_0594 PF00176 SNF2 family N-terminal domain Amet_0594 PF00271 Helicase conserved C-terminal domain Amet_0594 PF04434 Amet_0594 Amet_0594 PF08455 Amet_0594 Amet_0595 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Amet_0596 PF05016 Plasmid stabilisation system protein Amet_0597 PF00440 Bacterial regulatory proteins, tetR family Amet_0598 PF00005 ABC transporter Amet_0599 PF02687 Amet_0599 Amet_0600 PF16576 Amet_0600 Amet_0601 PF02310 B12 binding domain Amet_0601 PF04055 Radical SAM superfamily Amet_0602 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_0602 PF09084 NMT1/THI5 like Amet_0603 PF00072 Response regulator receiver domain Amet_0603 PF10057 Amet_0603 Amet_0604 PF00860 Permease family Amet_0605 PF00941 FAD binding domain in molybdopterin dehydrogenase Amet_0605 PF03450 CO dehydrogenase flavoprotein C-terminal domain Amet_0606 PF00111 2Fe-2S iron-sulfur cluster binding domain Amet_0606 PF01799 [2Fe-2S] binding domain Amet_0607 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Amet_0607 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Amet_0608 PF01514 Secretory protein of YscJ/FliF family Amet_0608 PF08345 Amet_0608 Amet_0609 PF01706 FliG C-terminal domain Amet_0609 PF14841 FliG middle domain Amet_0609 PF14842 FliG N-terminal domain Amet_0611 PF03748 Amet_0611 Amet_0612 PF01052 Surface presentation of antigens (SPOA) Amet_0612 PF02154 Flagellar motor switch protein FliM Amet_0613 PF01052 Surface presentation of antigens (SPOA) Amet_0614 PF00072 Response regulator receiver domain Amet_0615 PF00771 FHIPEP family Amet_0616 PF01554 MatE Amet_0617 PF06445 GyrI-like small molecule binding domain Amet_0617 PF13411 MerR HTH family regulatory protein Amet_0618 PF00072 Response regulator receiver domain Amet_0618 PF04397 LytTr DNA-binding domain Amet_0619 PF14501 GHKL domain Amet_0619 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Amet_0620 PF04647 Amet_0620 Amet_0622 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Amet_0622 PF08388 Amet_0622 Amet_0623 PF01609 Transposase DDE domain Amet_0631 PF14501 GHKL domain Amet_0637 PF05949 Bacterial protein of unknown function (DUF881) Amet_0638 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Amet_0639 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Amet_0640 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Amet_0640 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Amet_0640 PF10531 SLBB domain Amet_0640 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Amet_0641 PF00037 4Fe-4S binding domain Amet_0641 PF02256 Iron hydrogenase small subunit Amet_0641 PF02906 Iron only hydrogenase large subunit, C-terminal domain Amet_0641 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Amet_0641 PF13510 2Fe-2S iron-sulfur cluster binding domain Amet_0642 PF06808 Amet_0642 Amet_0643 PF16868 Amet_0643 Amet_0644 PF00793 DAHP synthetase I family Amet_0646 PF01842 ACT domain Amet_0646 PF02153 Prephenate dehydrogenase Amet_0647 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Amet_0648 PF00800 Prephenate dehydratase Amet_0649 PF01264 Chorismate synthase Amet_0650 PF01761 3-dehydroquinate synthase Amet_0651 PF01202 Shikimate kinase Amet_0651 PF01817 Chorismate mutase type II Amet_0652 PF00206 Lyase Amet_0652 PF14698 Argininosuccinate lyase C-terminal Amet_0653 PF00764 Arginosuccinate synthase Amet_0654 PF00877 NlpC/P60 family Amet_0655 PF00512 His Kinase A (phospho-acceptor) domain Amet_0655 PF00672 HAMP domain Amet_0655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_0656 PF00072 Response regulator receiver domain Amet_0656 PF00486 Transcriptional regulatory protein, C terminal Amet_0657 PF00571 CBS domain Amet_0659 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_0660 PF01546 Peptidase family M20/M25/M40 Amet_0660 PF07687 Peptidase dimerisation domain Amet_0661 PF03606 Amet_0661 Amet_0663 PF00158 Sigma-54 interaction domain Amet_0663 PF00571 CBS domain Amet_0663 PF00989 PAS fold Amet_0663 PF02954 Bacterial regulatory protein, Fis family Amet_0664 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Amet_0664 PF13375 RnfC Barrel sandwich hybrid domain Amet_0665 PF09338 Amet_0665 Amet_0667 PF07355 Amet_0667 Amet_0669 PF09338 Amet_0669 Amet_0670 PF09338 Amet_0670 Amet_0671 PF05544 Proline racemase Amet_0673 PF00696 Amino acid kinase family Amet_0674 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amet_0674 PF03129 Anticodon binding domain Amet_0674 PF04073 Aminoacyl-tRNA editing domain Amet_0675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_0675 PF05651 Amet_0675 Amet_0676 PF01019 Gamma-glutamyltranspeptidase Amet_0677 PF01557 Fumarylacetoacetate (FAA) hydrolase family Amet_0678 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amet_0678 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amet_0678 PF05161 MOFRL family Amet_0678 PF13660 Domain of unknown function (DUF4147) Amet_0679 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amet_0679 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Amet_0680 PF00107 Zinc-binding dehydrogenase Amet_0680 PF08240 Alcohol dehydrogenase GroES-like domain Amet_0681 PF00941 FAD binding domain in molybdopterin dehydrogenase Amet_0681 PF03450 CO dehydrogenase flavoprotein C-terminal domain Amet_0682 PF00111 2Fe-2S iron-sulfur cluster binding domain Amet_0682 PF01799 [2Fe-2S] binding domain Amet_0683 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Amet_0683 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Amet_0684 PF00860 Permease family Amet_0685 PF07905 Amet_0685 Amet_0685 PF13556 PucR C-terminal helix-turn-helix domain Amet_0686 PF11392 Amet_0686 Amet_0687 PF00549 CoA-ligase Amet_0687 PF02629 CoA binding domain Amet_0689 PF06545 Protein of unknown function (DUF1116) Amet_0690 PF04199 Putative cyclase Amet_0691 PF00795 Carbon-nitrogen hydrolase Amet_0692 PF02515 CoA-transferase family III Amet_0693 PF07260 Amet_0693 Amet_0694 PF03553 Amet_0694 Amet_0695 PF06338 Amet_0695 Amet_0696 PF00939 Sodium:sulfate symporter transmembrane region Amet_0697 PF00202 Aminotransferase class-III Amet_0698 PF13520 Amino acid permease Amet_0699 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Amet_0699 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Amet_0700 PF00158 Sigma-54 interaction domain Amet_0700 PF08448 PAS fold Amet_0701 PF04018 Amet_0701 Amet_0702 PF00294 pfkB family carbohydrate kinase Amet_0702 PF13412 Winged helix-turn-helix DNA-binding Amet_0703 PF04227 Indigoidine synthase A like protein Amet_0704 PF14501 GHKL domain Amet_0704 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Amet_0705 PF06949 Amet_0705 Amet_0706 PF13487 HD domain Amet_0707 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Amet_0707 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Amet_0707 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Amet_0707 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Amet_0708 PF00072 Response regulator receiver domain Amet_0708 PF00486 Transcriptional regulatory protein, C terminal Amet_0709 PF00512 His Kinase A (phospho-acceptor) domain Amet_0709 PF00672 HAMP domain Amet_0709 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_0710 PF10646 Amet_0710 Amet_0711 PF03547 Amet_0711 Amet_0712 PF00395 S-layer homology domain Amet_0712 PF01464 Transglycosylase SLT domain Amet_0713 PF06866 Amet_0713 Amet_0714 PF09388 Spo0E like sporulation regulatory protein Amet_0715 PF06695 Amet_0715 Amet_0716 PF00438 S-adenosylmethionine synthetase, N-terminal domain Amet_0716 PF02772 S-adenosylmethionine synthetase, central domain Amet_0716 PF02773 S-adenosylmethionine synthetase, C-terminal domain Amet_0717 PF04542 Sigma-70 region 2 Amet_0718 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_0718 PF17203 Amet_0718 Amet_0719 PF07872 Amet_0719 Amet_0720 PF11148 Amet_0720 Amet_0721 PF12841 Amet_0721 Amet_0722 PF13538 UvrD-like helicase C-terminal domain Amet_0722 PF13604 AAA domain Amet_0722 PF14490 Helix-hairpin-helix containing domain Amet_0722 PF14520 Helix-hairpin-helix domain Amet_0723 PF00156 Phosphoribosyl transferase domain Amet_0725 PF04316 Anti-sigma-28 factor, FlgM Amet_0726 PF05130 FlgN protein Amet_0727 PF00460 Flagella basal body rod protein Amet_0727 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Amet_0728 PF00669 Bacterial flagellin N-terminal helical region Amet_0728 PF00700 Bacterial flagellin C-terminal helical region Amet_0730 PF02623 FliW protein Amet_0731 PF02599 Global regulator protein family Amet_0732 PF00669 Bacterial flagellin N-terminal helical region Amet_0732 PF00700 Bacterial flagellin C-terminal helical region Amet_0733 PF14559 Tetratricopeptide repeat Amet_0735 PF14070 Amet_0735 Amet_0738 PF14070 Amet_0738 Amet_0739 PF08780 Nucleotidyltransferase substrate binding protein like Amet_0740 PF01909 Nucleotidyltransferase domain Amet_0741 PF14070 Amet_0741 Amet_0743 PF12784 Amet_0743 Amet_0744 PF14070 Amet_0744 Amet_0746 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Amet_0747 PF05016 Plasmid stabilisation system protein Amet_0748 PF01797 Transposase IS200 like Amet_0750 PF02915 Rubrerythrin Amet_0752 PF01966 HD domain Amet_0753 PF01381 Helix-turn-helix Amet_0755 PF01909 Nucleotidyltransferase domain Amet_0756 PF05168 HEPN domain Amet_0757 PF07670 Nucleoside recognition Amet_0759 PF00890 FAD binding domain Amet_0759 PF04205 FMN-binding domain Amet_0760 PF00881 Nitroreductase family Amet_0761 PF02645 Uncharacterised protein, DegV family COG1307 Amet_0762 PF09719 Putative redox-active protein (C_GCAxxG_C_C) Amet_0763 PF02311 AraC-like ligand binding domain Amet_0763 PF12833 Helix-turn-helix domain Amet_0764 PF01565 FAD binding domain Amet_0764 PF02913 FAD linked oxidases, C-terminal domain Amet_0765 PF01012 Electron transfer flavoprotein domain Amet_0766 PF00766 Electron transfer flavoprotein FAD-binding domain Amet_0766 PF01012 Electron transfer flavoprotein domain Amet_0766 PF13237 4Fe-4S dicluster domain Amet_0767 PF03616 Amet_0767 Amet_0768 PF11026 Amet_0768 Amet_0769 PF00583 Acetyltransferase (GNAT) family Amet_0770 PF13487 HD domain Amet_0771 PF08668 HDOD domain Amet_0772 PF03471 Transporter associated domain Amet_0775 PF02834 LigT like Phosphoesterase Amet_0776 PF04892 Amet_0776 Amet_0777 PF07521 RNA-metabolising metallo-beta-lactamase Amet_0777 PF10996 Beta-Casp domain Amet_0777 PF16661 Amet_0777 Amet_0779 PF16868 Amet_0779 Amet_0780 PF08905 Amet_0780 Amet_0781 PF06808 Amet_0781 Amet_0783 PF01063 Aminotransferase class IV Amet_0784 PF03646 FlaG protein Amet_0785 PF02465 Amet_0785 Amet_0785 PF07195 Amet_0785 Amet_0785 PF07196 Flagellin hook IN motif Amet_0786 PF02561 Flagellar protein FliS Amet_0787 PF05130 FlgN protein Amet_0788 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Amet_0788 PF16321 Amet_0788 Amet_0789 PF17248 Amet_0789 Amet_0790 PF01043 SecA preprotein cross-linking domain Amet_0790 PF02810 SEC-C motif Amet_0790 PF07516 SecA Wing and Scaffold domain Amet_0790 PF07517 SecA DEAD-like domain Amet_0791 PF00472 RF-1 domain Amet_0791 PF03462 PCRF domain Amet_0792 PF03885 Protein of unknown function (DUF327) Amet_0794 PF01312 FlhB HrpN YscU SpaS Family Amet_0795 PF00669 Bacterial flagellin N-terminal helical region Amet_0795 PF00700 Bacterial flagellin C-terminal helical region Amet_0796 PF02561 Flagellar protein FliS Amet_0797 PF00884 Sulfatase Amet_0798 PF13624 SurA N-terminal domain Amet_0799 PF00575 S1 RNA binding domain Amet_0799 PF09371 Tex-like protein N-terminal domain Amet_0799 PF12836 Helix-hairpin-helix motif Amet_0799 PF16921 Amet_0799 Amet_0800 PF07690 Major Facilitator Superfamily Amet_0802 PF12822 Protein of unknown function (DUF3816) Amet_0803 PF02367 Uncharacterised P-loop hydrolase UPF0079 Amet_0804 PF00814 Glycoprotease family Amet_0805 PF00583 Acetyltransferase (GNAT) family Amet_0806 PF00005 ABC transporter Amet_0808 PF00814 Glycoprotease family Amet_0810 PF00005 ABC transporter Amet_0810 PF12848 ABC transporter Amet_0810 PF16326 Amet_0810 Amet_0811 PF02629 CoA binding domain Amet_0811 PF06971 Putative DNA-binding protein N-terminus Amet_0813 PF12838 4Fe-4S dicluster domain Amet_0814 PF03780 Amet_0814 Amet_0815 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Amet_0815 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Amet_0817 PF02652 Amet_0817 Amet_0818 PF00392 Bacterial regulatory proteins, gntR family Amet_0818 PF07729 FCD domain Amet_0819 PF01012 Electron transfer flavoprotein domain Amet_0820 PF00766 Electron transfer flavoprotein FAD-binding domain Amet_0820 PF01012 Electron transfer flavoprotein domain Amet_0821 PF01565 FAD binding domain Amet_0821 PF02913 FAD linked oxidases, C-terminal domain Amet_0822 PF01910 Domain of unknown function DUF77 Amet_0823 PF00005 ABC transporter Amet_0824 PF16949 Amet_0824 Amet_0825 PF00455 Amet_0825 Amet_0825 PF08220 DeoR-like helix-turn-helix domain Amet_0826 PF00294 pfkB family carbohydrate kinase Amet_0827 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Amet_0828 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Amet_0828 PF02378 Phosphotransferase system, EIIC Amet_0829 PF03413 Peptidase propeptide and YPEB domain Amet_0830 PF00583 Acetyltransferase (GNAT) family Amet_0831 PF00730 HhH-GPD superfamily base excision DNA repair protein Amet_0831 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain Amet_0832 PF04474 Amet_0832 Amet_0833 PF00166 Chaperonin 10 Kd subunit Amet_0834 PF00118 TCP-1/cpn60 chaperonin family Amet_0835 PF00589 Phage integrase family Amet_0835 PF14657 Amet_0835 Amet_0835 PF14659 Phage integrase, N-terminal SAM-like domain Amet_0838 PF01381 Helix-turn-helix Amet_0840 PF12728 Helix-turn-helix domain Amet_0841 PF02498 Amet_0841 Amet_0841 PF03374 Amet_0841 Amet_0846 PF13476 AAA domain Amet_0847 PF00271 Helicase conserved C-terminal domain Amet_0847 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Amet_0847 PF04851 Type III restriction enzyme, res subunit Amet_0847 PF08463 Amet_0847 Amet_0848 PF02384 N-6 DNA Methylase Amet_0848 PF12161 HsdM N-terminal domain Amet_0849 PF01420 Type I restriction modification DNA specificity domain Amet_0850 PF13304 AAA domain Amet_0853 PF14088 Amet_0853 Amet_0855 PF12844 Helix-turn-helix domain Amet_0856 PF06114 Domain of unknown function (DUF955) Amet_0860 PF11148 Amet_0860 Amet_0861 PF07872 Amet_0861 Amet_0863 PF08291 Peptidase M15 Amet_0864 PF01726 LexA DNA binding domain Amet_0867 PF13274 Amet_0867 Amet_0867 PF15731 Amet_0867 Amet_0869 PF00692 dUTPase Amet_0870 PF03323 Amet_0870 Amet_0871 PF03845 Amet_0871 Amet_0872 PF05504 Spore germination B3/ GerAC like, C-terminal Amet_0876 PF15935 Amet_0876 Amet_0879 PF14088 Amet_0879 Amet_0886 PF01381 Helix-turn-helix Amet_0888 PF12833 Helix-turn-helix domain Amet_0889 PF00892 EamA-like transporter family Amet_0890 PF01588 Putative tRNA binding domain Amet_0891 PF08282 haloacid dehalogenase-like hydrolase Amet_0892 PF00294 pfkB family carbohydrate kinase Amet_0893 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Amet_0894 PF00005 ABC transporter Amet_0894 PF08402 TOBE domain Amet_0895 PF07470 Glycosyl Hydrolase Family 88 Amet_0896 PF13416 Bacterial extracellular solute-binding protein Amet_0897 PF00528 Binding-protein-dependent transport system inner membrane component Amet_0898 PF00528 Binding-protein-dependent transport system inner membrane component Amet_0899 PF00295 Glycosyl hydrolases family 28 Amet_0900 PF04962 KduI/IolB family Amet_0901 PF13561 Enoyl-(Acyl carrier protein) reductase Amet_0902 PF00356 Bacterial regulatory proteins, lacI family Amet_0902 PF13377 Periplasmic binding protein-like domain Amet_0905 PF07875 Amet_0905 Amet_0907 PF00248 Aldo/keto reductase family Amet_0907 PF13534 4Fe-4S dicluster domain Amet_0908 PF03061 Thioesterase superfamily Amet_0909 PF00478 IMP dehydrogenase / GMP reductase domain Amet_0909 PF00571 CBS domain Amet_0910 PF00117 Glutamine amidotransferase class-I Amet_0910 PF00958 GMP synthase C terminal domain Amet_0910 PF03054 tRNA methyl transferase Amet_0911 PF13495 Phage integrase, N-terminal SAM-like domain Amet_0912 PF04324 BFD-like [2Fe-2S] binding domain Amet_0913 PF07885 Ion channel Amet_0914 PF07833 Copper amine oxidase N-terminal domain Amet_0914 PF12836 Helix-hairpin-helix motif Amet_0916 PF02222 ATP-grasp domain Amet_0917 PF00731 AIR carboxylase Amet_0918 PF01259 SAICAR synthetase Amet_0919 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Amet_0920 PF13507 CobB/CobQ-like glutamine amidotransferase domain Amet_0921 PF00586 AIR synthase related protein, N-terminal domain Amet_0921 PF02769 AIR synthase related protein, C-terminal domain Amet_0922 PF00156 Phosphoribosyl transferase domain Amet_0922 PF13537 Glutamine amidotransferase domain Amet_0923 PF00586 AIR synthase related protein, N-terminal domain Amet_0923 PF02769 AIR synthase related protein, C-terminal domain Amet_0924 PF00551 Formyl transferase Amet_0925 PF01808 AICARFT/IMPCHase bienzyme Amet_0925 PF02142 MGS-like domain Amet_0926 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Amet_0926 PF02843 Phosphoribosylglycinamide synthetase, C domain Amet_0926 PF02844 Phosphoribosylglycinamide synthetase, N domain Amet_0927 PF13450 NAD(P)-binding Rossmann-like domain Amet_0929 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_0930 PF03180 NLPA lipoprotein Amet_0931 PF00528 Binding-protein-dependent transport system inner membrane component Amet_0932 PF00005 ABC transporter Amet_0934 PF01371 Trp repressor protein Amet_0935 PF00696 Amino acid kinase family Amet_0935 PF13840 ACT domain Amet_0938 PF00072 Response regulator receiver domain Amet_0938 PF00990 GGDEF domain Amet_0938 PF08447 PAS fold Amet_0938 PF13426 PAS domain Amet_0938 PF13487 HD domain Amet_0940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_0940 PF17203 Amet_0940 Amet_0941 PF00580 UvrD/REP helicase N-terminal domain Amet_0941 PF12073 Amet_0941 Amet_0941 PF13361 UvrD-like helicase C-terminal domain Amet_0942 PF00533 BRCA1 C Terminus (BRCT) domain Amet_0942 PF01653 NAD-dependent DNA ligase adenylation domain Amet_0942 PF03120 NAD-dependent DNA ligase OB-fold domain Amet_0942 PF12826 Helix-hairpin-helix motif Amet_0942 PF14520 Helix-hairpin-helix domain Amet_0944 PF07314 Amet_0944 Amet_0945 PF02915 Rubrerythrin Amet_0946 PF04023 FeoA domain Amet_0947 PF02421 Ferrous iron transport protein B Amet_0947 PF07664 Amet_0947 Amet_0947 PF07670 Nucleoside recognition Amet_0949 PF03706 Amet_0949 Amet_0952 PF00586 AIR synthase related protein, N-terminal domain Amet_0952 PF02769 AIR synthase related protein, C-terminal domain Amet_0953 PF01520 N-acetylmuramoyl-L-alanine amidase Amet_0953 PF07833 Copper amine oxidase N-terminal domain Amet_0953 PF11741 AMIN domain Amet_0954 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Amet_0955 PF10646 Amet_0955 Amet_0956 PF01138 3' exoribonuclease family, domain 1 Amet_0956 PF03725 3' exoribonuclease family, domain 2 Amet_0957 PF01725 Ham1 family Amet_0958 PF12850 Calcineurin-like phosphoesterase superfamily domain Amet_0963 PF00395 S-layer homology domain Amet_0963 PF02872 5'-nucleotidase, C-terminal domain Amet_0965 PF01797 Transposase IS200 like Amet_0966 PF01385 Amet_0966 Amet_0966 PF07282 Amet_0966 Amet_0966 PF12323 Amet_0966 Amet_0967 PF00672 HAMP domain Amet_0967 PF00989 PAS fold Amet_0967 PF00990 GGDEF domain Amet_0967 PF02743 Cache domain Amet_0967 PF13487 HD domain Amet_0969 PF03480 Bacterial extracellular solute-binding protein, family 7 Amet_0970 PF04290 Amet_0970 Amet_0971 PF06808 Amet_0971 Amet_0972 PF13242 HAD-hyrolase-like Amet_0972 PF13344 Haloacid dehalogenase-like hydrolase Amet_0973 PF01266 FAD dependent oxidoreductase Amet_0973 PF04324 BFD-like [2Fe-2S] binding domain Amet_0974 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amet_0975 PF07892 Protein of unknown function (DUF1667) Amet_0976 PF02308 Amet_0976 Amet_0977 PF06874 Amet_0977 Amet_0979 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Amet_0979 PF03466 LysR substrate binding domain Amet_0980 PF08984 Domain of unknown function (DUF1858) Amet_0981 PF01022 Bacterial regulatory protein, arsR family Amet_0983 PF01451 Low molecular weight phosphotyrosine protein phosphatase Amet_0984 PF01758 Sodium Bile acid symporter family Amet_0985 PF06953 Arsenical resistance operon trans-acting repressor ArsD Amet_0986 PF02374 Anion-transporting ATPase Amet_0987 PF02374 Anion-transporting ATPase Amet_0988 PF04055 Radical SAM superfamily Amet_0988 PF13186 Iron-sulfur cluster-binding domain Amet_0988 PF13353 4Fe-4S single cluster domain Amet_0989 PF12804 MobA-like NTP transferase domain Amet_0990 PF00384 Molybdopterin oxidoreductase Amet_0990 PF01568 Molydopterin dinucleotide binding domain Amet_0991 PF12800 4Fe-4S binding domain Amet_0991 PF13247 4Fe-4S dicluster domain Amet_0992 PF02613 Nitrate reductase delta subunit Amet_0993 PF00037 4Fe-4S binding domain Amet_0993 PF12838 4Fe-4S dicluster domain Amet_0994 PF02416 mttA/Hcf106 family Amet_0995 PF00994 Probable molybdopterin binding domain Amet_0996 PF00994 Probable molybdopterin binding domain Amet_0996 PF03453 MoeA N-terminal region (domain I and II) Amet_0996 PF03454 MoeA C-terminal region (domain IV) Amet_0997 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Amet_0998 PF02416 mttA/Hcf106 family Amet_0999 PF00902 Sec-independent protein translocase protein (TatC) Amet_1000 PF02634 FdhD/NarQ family Amet_1001 PF00013 KH domain Amet_1001 PF00575 S1 RNA binding domain Amet_1001 PF01138 3' exoribonuclease family, domain 1 Amet_1001 PF03725 3' exoribonuclease family, domain 2 Amet_1001 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Amet_1002 PF13489 Methyltransferase domain Amet_1003 PF12728 Helix-turn-helix domain Amet_1004 PF13245 Part of AAA domain Amet_1004 PF13538 UvrD-like helicase C-terminal domain Amet_1006 PF00013 KH domain Amet_1006 PF00575 S1 RNA binding domain Amet_1006 PF01138 3' exoribonuclease family, domain 1 Amet_1006 PF03725 3' exoribonuclease family, domain 2 Amet_1006 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Amet_1007 PF00293 NUDIX domain Amet_1008 PF12728 Helix-turn-helix domain Amet_1009 PF07690 Major Facilitator Superfamily Amet_1010 PF00916 Amet_1010 Amet_1010 PF01740 STAS domain Amet_1012 PF00512 His Kinase A (phospho-acceptor) domain Amet_1012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1012 PF08447 PAS fold Amet_1012 PF14417 Amet_1012 Amet_1013 PF00072 Response regulator receiver domain Amet_1013 PF00512 His Kinase A (phospho-acceptor) domain Amet_1013 PF01627 Hpt domain Amet_1013 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1014 PF00072 Response regulator receiver domain Amet_1014 PF00486 Transcriptional regulatory protein, C terminal Amet_1015 PF09388 Spo0E like sporulation regulatory protein Amet_1016 PF07670 Nucleoside recognition Amet_1017 PF07670 Nucleoside recognition Amet_1018 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Amet_1018 PF01872 RibD C-terminal domain Amet_1019 PF00677 Lumazine binding domain Amet_1020 PF00925 GTP cyclohydrolase II Amet_1020 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Amet_1021 PF00885 6,7-dimethyl-8-ribityllumazine synthase Amet_1022 PF12849 PBP superfamily domain Amet_1023 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1024 PF00005 ABC transporter Amet_1025 PF09388 Spo0E like sporulation regulatory protein Amet_1026 PF00571 CBS domain Amet_1029 PF03816 Cell envelope-related transcriptional attenuator domain Amet_1030 PF07228 Stage II sporulation protein E (SpoIIE) Amet_1030 PF17159 Amet_1030 Amet_1032 PF00005 ABC transporter Amet_1032 PF00664 ABC transporter transmembrane region Amet_1032 PF03412 Peptidase C39 family Amet_1033 PF13437 HlyD family secretion protein Amet_1033 PF13533 Biotin-lipoyl like Amet_1035 PF02517 CAAX protease self-immunity Amet_1036 PF02517 CAAX protease self-immunity Amet_1039 PF04055 Radical SAM superfamily Amet_1039 PF13181 Tetratricopeptide repeat Amet_1039 PF13186 Iron-sulfur cluster-binding domain Amet_1039 PF13353 4Fe-4S single cluster domain Amet_1040 PF00196 Bacterial regulatory proteins, luxR family Amet_1042 PF02517 CAAX protease self-immunity Amet_1045 PF01695 IstB-like ATP binding protein Amet_1046 PF00665 Integrase core domain Amet_1054 PF02517 CAAX protease self-immunity Amet_1055 PF13655 Amet_1055 Amet_1056 PF00239 Resolvase, N terminal domain Amet_1056 PF07508 Recombinase Amet_1056 PF13408 Recombinase zinc beta ribbon domain Amet_1059 PF00675 Insulinase (Peptidase family M16) Amet_1059 PF05193 Peptidase M16 inactive domain Amet_1059 PF08367 Peptidase M16C associated Amet_1060 PF00196 Bacterial regulatory proteins, luxR family Amet_1063 PF01432 Peptidase family M3 Amet_1063 PF08439 Oligopeptidase F Amet_1064 PF00583 Acetyltransferase (GNAT) family Amet_1064 PF00795 Carbon-nitrogen hydrolase Amet_1065 PF00356 Bacterial regulatory proteins, lacI family Amet_1065 PF13377 Periplasmic binding protein-like domain Amet_1066 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Amet_1066 PF05697 Bacterial trigger factor protein (TF) Amet_1066 PF05698 Bacterial trigger factor protein (TF) C-terminus Amet_1067 PF00574 Clp protease Amet_1068 PF06689 ClpX C4-type zinc finger Amet_1068 PF07724 AAA domain (Cdc48 subfamily) Amet_1068 PF10431 C-terminal, D2-small domain, of ClpB protein Amet_1069 PF02417 Amet_1069 Amet_1070 PF02417 Amet_1070 Amet_1071 PF00004 ATPase family associated with various cellular activities (AAA) Amet_1071 PF05362 Lon protease (S16) C-terminal proteolytic domain Amet_1072 PF00004 ATPase family associated with various cellular activities (AAA) Amet_1072 PF02190 ATP-dependent protease La (LON) domain Amet_1072 PF05362 Lon protease (S16) C-terminal proteolytic domain Amet_1073 PF01926 50S ribosome-binding GTPase Amet_1074 PF01220 Dehydroquinase class II Amet_1075 PF01488 Shikimate / quinate 5-dehydrogenase Amet_1075 PF08501 Shikimate dehydrogenase substrate binding domain Amet_1076 PF00892 EamA-like transporter family Amet_1077 PF00425 chorismate binding enzyme Amet_1077 PF04715 Anthranilate synthase component I, N terminal region Amet_1078 PF00117 Glutamine amidotransferase class-I Amet_1079 PF00591 Glycosyl transferase family, a/b domain Amet_1079 PF02885 Glycosyl transferase family, helical bundle domain Amet_1080 PF00218 Indole-3-glycerol phosphate synthase Amet_1081 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Amet_1082 PF00291 Pyridoxal-phosphate dependent enzyme Amet_1083 PF00290 Tryptophan synthase alpha chain Amet_1084 PF00301 Rubredoxin Amet_1085 PF02073 Thermophilic metalloprotease (M29) Amet_1086 PF04402 Protein of unknown function (DUF541) Amet_1087 PF04324 BFD-like [2Fe-2S] binding domain Amet_1089 PF00704 Glycosyl hydrolases family 18 Amet_1090 PF03747 ADP-ribosylglycohydrolase Amet_1090 PF13181 Tetratricopeptide repeat Amet_1091 PF07690 Major Facilitator Superfamily Amet_1094 PF00122 E1-E2 ATPase Amet_1094 PF00403 Heavy-metal-associated domain Amet_1094 PF00702 haloacid dehalogenase-like hydrolase Amet_1099 PF00072 Response regulator receiver domain Amet_1099 PF00486 Transcriptional regulatory protein, C terminal Amet_1100 PF00512 His Kinase A (phospho-acceptor) domain Amet_1100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1101 PF07907 Amet_1101 Amet_1104 PF02541 Ppx/GppA phosphatase family Amet_1105 PF03401 Tripartite tricarboxylate transporter family receptor Amet_1106 PF07331 Amet_1106 Amet_1107 PF01970 Amet_1107 Amet_1109 PF01609 Transposase DDE domain Amet_1110 PF01047 MarR family Amet_1111 PF01554 MatE Amet_1113 PF07561 Amet_1113 Amet_1114 PF12672 Amet_1114 Amet_1116 PF00258 Flavodoxin Amet_1117 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1118 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1119 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amet_1120 PF00005 ABC transporter Amet_1120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_1121 PF00005 ABC transporter Amet_1122 PF01554 MatE Amet_1123 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family Amet_1124 PF08821 Amet_1124 Amet_1125 PF07883 Cupin domain Amet_1126 PF00027 Cyclic nucleotide-binding domain Amet_1126 PF13545 Crp-like helix-turn-helix domain Amet_1127 PF01869 BadF/BadG/BcrA/BcrD ATPase family Amet_1127 PF09989 Amet_1127 Amet_1128 PF00005 ABC transporter Amet_1129 PF09084 NMT1/THI5 like Amet_1130 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1131 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amet_1132 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1133 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1133 PF12911 Amet_1133 Amet_1134 PF00005 ABC transporter Amet_1135 PF00005 ABC transporter Amet_1136 PF01554 MatE Amet_1137 PF00672 HAMP domain Amet_1137 PF06580 Amet_1137 Amet_1138 PF00072 Response regulator receiver domain Amet_1138 PF12833 Helix-turn-helix domain Amet_1139 PF00122 E1-E2 ATPase Amet_1139 PF00702 haloacid dehalogenase-like hydrolase Amet_1140 PF02583 Metal-sensitive transcriptional repressor Amet_1141 PF01131 DNA topoisomerase Amet_1141 PF01751 Toprim domain Amet_1142 PF01899 Amet_1142 Amet_1143 PF04066 Amet_1143 Amet_1144 PF03334 Amet_1144 Amet_1145 PF13244 Amet_1145 Amet_1147 PF04039 Amet_1147 Amet_1148 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Amet_1149 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Amet_1150 PF00392 Bacterial regulatory proteins, gntR family Amet_1150 PF07702 UTRA domain Amet_1151 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Amet_1152 PF06754 Amet_1152 Amet_1153 PF05845 Bacterial phosphonate metabolism protein (PhnH) Amet_1154 PF05861 Amet_1154 Amet_1155 PF06007 Amet_1155 Amet_1156 PF00005 ABC transporter Amet_1157 PF01979 Amidohydrolase family Amet_1158 PF00005 ABC transporter Amet_1160 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1161 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1162 PF00005 ABC transporter Amet_1163 PF05598 Amet_1163 Amet_1164 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein Amet_1165 PF13487 HD domain Amet_1167 PF00990 GGDEF domain Amet_1167 PF01590 GAF domain Amet_1168 PF13091 PLD-like domain Amet_1169 PF09989 Amet_1169 Amet_1171 PF01869 BadF/BadG/BcrA/BcrD ATPase family Amet_1173 PF00005 ABC transporter Amet_1174 PF00950 Amet_1174 Amet_1176 PF08984 Domain of unknown function (DUF1858) Amet_1177 PF03063 Prismane/CO dehydrogenase family Amet_1178 PF07784 Amet_1178 Amet_1179 PF13649 Methyltransferase domain Amet_1180 PF00027 Cyclic nucleotide-binding domain Amet_1180 PF13545 Crp-like helix-turn-helix domain Amet_1181 PF02583 Metal-sensitive transcriptional repressor Amet_1182 PF07155 ECF-type riboflavin transporter, S component Amet_1184 PF13419 Haloacid dehalogenase-like hydrolase Amet_1186 PF00188 Cysteine-rich secretory protein family Amet_1187 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_1187 PF07700 Heme NO binding Amet_1189 PF02548 Ketopantoate hydroxymethyltransferase Amet_1191 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Amet_1191 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Amet_1192 PF01546 Peptidase family M20/M25/M40 Amet_1192 PF07687 Peptidase dimerisation domain Amet_1193 PF01614 Bacterial transcriptional regulator Amet_1193 PF09339 IclR helix-turn-helix domain Amet_1194 PF00557 Metallopeptidase family M24 Amet_1194 PF01321 Creatinase/Prolidase N-terminal domain Amet_1195 PF01177 Asp/Glu/Hydantoin racemase Amet_1196 PF00892 EamA-like transporter family Amet_1197 PF00583 Acetyltransferase (GNAT) family Amet_1198 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amet_1198 PF12367 Amet_1198 Amet_1199 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amet_1199 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amet_1199 PF17147 Amet_1199 Amet_1200 PF00579 tRNA synthetases class I (W and Y) Amet_1201 PF00269 Small, acid-soluble spore proteins, alpha/beta type Amet_1202 PF05949 Bacterial protein of unknown function (DUF881) Amet_1205 PF02308 Amet_1205 Amet_1206 PF02390 Putative methyltransferase Amet_1211 PF01554 MatE Amet_1212 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amet_1212 PF12367 Amet_1212 Amet_1213 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amet_1213 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amet_1213 PF17147 Amet_1213 Amet_1214 PF04307 Amet_1214 Amet_1215 PF05437 Amet_1215 Amet_1216 PF03591 Amet_1216 Amet_1217 PF13419 Haloacid dehalogenase-like hydrolase Amet_1218 PF08973 Domain of unknown function (DUF1893) Amet_1220 PF13509 S1 domain Amet_1221 PF03780 Amet_1221 Amet_1223 PF00550 Phosphopantetheine attachment site Amet_1225 PF01895 PhoU domain Amet_1225 PF02690 Amet_1225 Amet_1226 PF03575 Peptidase family S51 Amet_1227 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Amet_1227 PF02875 Mur ligase family, glutamate ligase domain Amet_1227 PF08245 Mur ligase middle domain Amet_1228 PF12710 haloacid dehalogenase-like hydrolase Amet_1229 PF01022 Bacterial regulatory protein, arsR family Amet_1230 PF03773 Amet_1230 Amet_1231 PF13192 Thioredoxin domain Amet_1232 PF01609 Transposase DDE domain Amet_1234 PF02424 ApbE family Amet_1235 PF00583 Acetyltransferase (GNAT) family Amet_1236 PF01471 Putative peptidoglycan binding domain Amet_1236 PF03734 L,D-transpeptidase catalytic domain Amet_1237 PF01255 Putative undecaprenyl diphosphate synthase Amet_1238 PF02411 Amet_1238 Amet_1239 PF04205 FMN-binding domain Amet_1240 PF00005 ABC transporter Amet_1241 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1242 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amet_1243 PF02308 Amet_1243 Amet_1246 PF01609 Transposase DDE domain Amet_1247 PF02581 Thiamine monophosphate synthase/TENI Amet_1248 PF02110 Hydroxyethylthiazole kinase family Amet_1249 PF08543 Phosphomethylpyrimidine kinase Amet_1250 PF09512 Amet_1250 Amet_1251 PF00676 Dehydrogenase E1 component Amet_1252 PF02779 Transketolase, pyrimidine binding domain Amet_1252 PF02780 Transketolase, C-terminal domain Amet_1253 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Amet_1253 PF00364 Biotin-requiring enzyme Amet_1253 PF02817 e3 binding domain Amet_1254 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Amet_1254 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amet_1255 PF00072 Response regulator receiver domain Amet_1255 PF07228 Stage II sporulation protein E (SpoIIE) Amet_1256 PF00672 HAMP domain Amet_1256 PF01966 HD domain Amet_1256 PF02743 Cache domain Amet_1256 PF13185 GAF domain Amet_1257 PF00874 PRD domain Amet_1257 PF03123 CAT RNA binding domain Amet_1258 PF00381 PTS HPr component phosphorylation site Amet_1259 PF00391 PEP-utilising enzyme, mobile domain Amet_1259 PF02896 PEP-utilising enzyme, TIM barrel domain Amet_1259 PF05524 PEP-utilising enzyme, N-terminal Amet_1260 PF01614 Bacterial transcriptional regulator Amet_1260 PF09339 IclR helix-turn-helix domain Amet_1261 PF01081 KDPG and KHG aldolase Amet_1262 PF00294 pfkB family carbohydrate kinase Amet_1263 PF00392 Bacterial regulatory proteins, gntR family Amet_1263 PF07729 FCD domain Amet_1264 PF00392 Bacterial regulatory proteins, gntR family Amet_1264 PF07729 FCD domain Amet_1265 PF07331 Amet_1265 Amet_1266 PF03401 Tripartite tricarboxylate transporter family receptor Amet_1267 PF01970 Amet_1267 Amet_1268 PF00920 Dehydratase family Amet_1269 PF00120 Glutamine synthetase, catalytic domain Amet_1270 PF12732 Amet_1270 Amet_1271 PF06103 Amet_1271 Amet_1272 PF13483 Beta-lactamase superfamily domain Amet_1273 PF09335 Amet_1273 Amet_1274 PF01966 HD domain Amet_1274 PF13185 GAF domain Amet_1275 PF00512 His Kinase A (phospho-acceptor) domain Amet_1275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1275 PF08447 PAS fold Amet_1276 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1278 PF00512 His Kinase A (phospho-acceptor) domain Amet_1278 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1279 PF01613 Flavin reductase like domain Amet_1281 PF04647 Amet_1281 Amet_1282 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Amet_1283 PF03845 Amet_1283 Amet_1284 PF05504 Spore germination B3/ GerAC like, C-terminal Amet_1285 PF03323 Amet_1285 Amet_1286 PF00239 Resolvase, N terminal domain Amet_1286 PF07508 Recombinase Amet_1286 PF13408 Recombinase zinc beta ribbon domain Amet_1288 PF03480 Bacterial extracellular solute-binding protein, family 7 Amet_1289 PF04290 Amet_1289 Amet_1290 PF06808 Amet_1290 Amet_1291 PF02614 Glucuronate isomerase Amet_1292 PF03786 D-mannonate dehydratase (UxuA) Amet_1293 PF01232 Mannitol dehydrogenase Rossmann domain Amet_1293 PF08125 Mannitol dehydrogenase C-terminal domain Amet_1294 PF00392 Bacterial regulatory proteins, gntR family Amet_1294 PF07729 FCD domain Amet_1295 PF00005 ABC transporter Amet_1296 PF00313 'Cold-shock' DNA-binding domain Amet_1297 PF03167 Uracil DNA glycosylase superfamily Amet_1298 PF00753 Metallo-beta-lactamase superfamily Amet_1299 PF11213 Protein of unknown function (DUF3006) Amet_1301 PF00933 Glycosyl hydrolase family 3 N terminal domain Amet_1302 PF00120 Glutamine synthetase, catalytic domain Amet_1302 PF03951 Glutamine synthetase, beta-Grasp domain Amet_1303 PF00072 Response regulator receiver domain Amet_1304 PF00390 Malic enzyme, N-terminal domain Amet_1304 PF03949 Malic enzyme, NAD binding domain Amet_1305 PF04055 Radical SAM superfamily Amet_1307 PF01609 Transposase DDE domain Amet_1312 PF01609 Transposase DDE domain Amet_1315 PF13276 Amet_1315 Amet_1317 PF03023 Amet_1317 Amet_1318 PF03819 MazG nucleotide pyrophosphohydrolase domain Amet_1319 PF00180 Isocitrate/isopropylmalate dehydrogenase Amet_1320 PF00330 Aconitase family (aconitate hydratase) Amet_1320 PF00694 Aconitase C-terminal domain Amet_1321 PF00682 HMGL-like Amet_1323 PF00392 Bacterial regulatory proteins, gntR family Amet_1324 PF00005 ABC transporter Amet_1326 PF00005 ABC transporter Amet_1327 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1328 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein Amet_1329 PF02613 Nitrate reductase delta subunit Amet_1330 PF00384 Molybdopterin oxidoreductase Amet_1330 PF01568 Molydopterin dinucleotide binding domain Amet_1331 PF12800 4Fe-4S binding domain Amet_1331 PF13247 4Fe-4S dicluster domain Amet_1332 PF12837 4Fe-4S binding domain Amet_1332 PF12838 4Fe-4S dicluster domain Amet_1333 PF05013 N-formylglutamate amidohydrolase Amet_1334 PF03486 HI0933-like protein Amet_1337 PF13686 DsrE/DsrF/DrsH-like family Amet_1339 PF00440 Bacterial regulatory proteins, tetR family Amet_1340 PF13437 HlyD family secretion protein Amet_1340 PF13533 Biotin-lipoyl like Amet_1341 PF00873 AcrB/AcrD/AcrF family Amet_1343 PF00571 CBS domain Amet_1343 PF01595 Amet_1343 Amet_1343 PF03471 Transporter associated domain Amet_1345 PF00266 Aminotransferase class-V Amet_1346 PF00210 Ferritin-like domain Amet_1347 PF08282 haloacid dehalogenase-like hydrolase Amet_1348 PF00890 FAD binding domain Amet_1349 PF00294 pfkB family carbohydrate kinase Amet_1352 PF09587 Bacterial capsule synthesis protein PGA_cap Amet_1354 PF01571 Aminomethyltransferase folate-binding domain Amet_1354 PF08669 Glycine cleavage T-protein C-terminal barrel domain Amet_1355 PF01597 Glycine cleavage H-protein Amet_1356 PF02347 Glycine cleavage system P-protein Amet_1357 PF02347 Glycine cleavage system P-protein Amet_1358 PF01869 BadF/BadG/BcrA/BcrD ATPase family Amet_1358 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Amet_1358 PF09989 Amet_1358 Amet_1359 PF01814 Hemerythrin HHE cation binding domain Amet_1360 PF07136 Amet_1360 Amet_1361 PF07870 Amet_1361 Amet_1364 PF00269 Small, acid-soluble spore proteins, alpha/beta type Amet_1365 PF01098 Amet_1365 Amet_1366 PF00571 CBS domain Amet_1366 PF01769 Divalent cation transporter Amet_1366 PF03448 MgtE intracellular N domain Amet_1367 PF01471 Putative peptidoglycan binding domain Amet_1367 PF07486 Cell Wall Hydrolase Amet_1368 PF03413 Peptidase propeptide and YPEB domain Amet_1368 PF14620 Amet_1368 Amet_1369 PF14398 Amet_1369 Amet_1370 PF01391 Collagen triple helix repeat (20 copies) Amet_1372 PF01609 Transposase DDE domain Amet_1373 PF12837 4Fe-4S binding domain Amet_1375 PF00342 Phosphoglucose isomerase Amet_1376 PF01177 Asp/Glu/Hydantoin racemase Amet_1377 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1377 PF06580 Amet_1377 Amet_1377 PF07694 5TMR of 5TMR-LYT Amet_1378 PF00072 Response regulator receiver domain Amet_1378 PF04397 LytTr DNA-binding domain Amet_1380 PF02554 Amet_1380 Amet_1380 PF13722 Amet_1380 Amet_1381 PF01910 Domain of unknown function DUF77 Amet_1382 PF01546 Peptidase family M20/M25/M40 Amet_1383 PF01943 Amet_1383 Amet_1383 PF14667 Polysaccharide biosynthesis C-terminal domain Amet_1387 PF03477 ATP cone domain Amet_1387 PF13597 Anaerobic ribonucleoside-triphosphate reductase Amet_1388 PF04055 Radical SAM superfamily Amet_1388 PF13353 4Fe-4S single cluster domain Amet_1390 PF04657 Amet_1390 Amet_1391 PF04657 Amet_1391 Amet_1392 PF00027 Cyclic nucleotide-binding domain Amet_1392 PF13545 Crp-like helix-turn-helix domain Amet_1394 PF00890 FAD binding domain Amet_1394 PF04205 FMN-binding domain Amet_1395 PF13411 MerR HTH family regulatory protein Amet_1398 PF09084 NMT1/THI5 like Amet_1400 PF01066 CDP-alcohol phosphatidyltransferase Amet_1402 PF00133 tRNA synthetases class I (I, L, M and V) Amet_1402 PF08264 Anticodon-binding domain of tRNA Amet_1402 PF10458 Valyl tRNA synthetase tRNA binding arm Amet_1403 PF02875 Mur ligase family, glutamate ligase domain Amet_1403 PF08245 Mur ligase middle domain Amet_1404 PF01545 Cation efflux family Amet_1404 PF16916 Amet_1404 Amet_1405 PF00589 Phage integrase family Amet_1405 PF13495 Phage integrase, N-terminal SAM-like domain Amet_1408 PF11185 Amet_1408 Amet_1409 PF13655 Amet_1409 Amet_1410 PF00239 Resolvase, N terminal domain Amet_1410 PF07508 Recombinase Amet_1410 PF13408 Recombinase zinc beta ribbon domain Amet_1411 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Amet_1411 PF08388 Amet_1411 Amet_1413 PF00583 Acetyltransferase (GNAT) family Amet_1414 PF13489 Methyltransferase domain Amet_1415 PF04191 Phospholipid methyltransferase Amet_1416 PF12838 4Fe-4S dicluster domain Amet_1418 PF00753 Metallo-beta-lactamase superfamily Amet_1419 PF00583 Acetyltransferase (GNAT) family Amet_1420 PF00583 Acetyltransferase (GNAT) family Amet_1421 PF01965 DJ-1/PfpI family Amet_1422 PF00805 Pentapeptide repeats (8 copies) Amet_1423 PF13302 Acetyltransferase (GNAT) domain Amet_1426 PF04294 Amet_1426 Amet_1428 PF12833 Helix-turn-helix domain Amet_1431 PF00144 Beta-lactamase Amet_1432 PF06713 Amet_1432 Amet_1433 PF04073 Aminoacyl-tRNA editing domain Amet_1434 PF08002 Protein of unknown function (DUF1697) Amet_1435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Amet_1436 PF00583 Acetyltransferase (GNAT) family Amet_1439 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Amet_1440 PF13649 Methyltransferase domain Amet_1441 PF08713 DNA alkylation repair enzyme Amet_1442 PF01553 Acyltransferase Amet_1444 PF13539 D-alanyl-D-alanine carboxypeptidase Amet_1445 PF01814 Hemerythrin HHE cation binding domain Amet_1445 PF08984 Domain of unknown function (DUF1858) Amet_1445 PF10006 Amet_1445 Amet_1445 PF13596 PAS domain Amet_1446 PF03063 Prismane/CO dehydrogenase family Amet_1447 PF00582 Universal stress protein family Amet_1448 PF00563 EAL domain Amet_1448 PF00989 PAS fold Amet_1448 PF00990 GGDEF domain Amet_1448 PF13426 PAS domain Amet_1449 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_1449 PF02743 Cache domain Amet_1450 PF02678 Pirin Amet_1450 PF05726 Pirin C-terminal cupin domain Amet_1451 PF00005 ABC transporter Amet_1451 PF12848 ABC transporter Amet_1452 PF00583 Acetyltransferase (GNAT) family Amet_1453 PF01965 DJ-1/PfpI family Amet_1455 PF00583 Acetyltransferase (GNAT) family Amet_1457 PF00072 Response regulator receiver domain Amet_1457 PF00486 Transcriptional regulatory protein, C terminal Amet_1458 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1459 PF00005 ABC transporter Amet_1460 PF02687 Amet_1460 Amet_1461 PF00578 AhpC/TSA family Amet_1461 PF10417 C-terminal domain of 1-Cys peroxiredoxin Amet_1462 PF00578 AhpC/TSA family Amet_1463 PF02001 Amet_1463 Amet_1464 PF02579 Dinitrogenase iron-molybdenum cofactor Amet_1465 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_1465 PF13187 4Fe-4S dicluster domain Amet_1466 PF00037 4Fe-4S binding domain Amet_1466 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_1467 PF02579 Dinitrogenase iron-molybdenum cofactor Amet_1469 PF02146 Sir2 family Amet_1471 PF00665 Integrase core domain Amet_1472 PF01695 IstB-like ATP binding protein Amet_1474 PF01965 DJ-1/PfpI family Amet_1479 PF01047 MarR family Amet_1480 PF02374 Anion-transporting ATPase Amet_1481 PF00005 ABC transporter Amet_1482 PF12698 ABC-2 family transporter protein Amet_1484 PF02274 Amidinotransferase Amet_1486 PF01520 N-acetylmuramoyl-L-alanine amidase Amet_1486 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Amet_1489 PF07833 Copper amine oxidase N-terminal domain Amet_1489 PF14343 Amet_1489 Amet_1491 PF04235 Amet_1491 Amet_1496 PF03358 NADPH-dependent FMN reductase Amet_1497 PF00578 AhpC/TSA family Amet_1498 PF07833 Copper amine oxidase N-terminal domain Amet_1498 PF14343 Amet_1498 Amet_1499 PF05598 Amet_1499 Amet_1499 PF13751 Amet_1499 Amet_1501 PF00005 ABC transporter Amet_1502 PF00440 Bacterial regulatory proteins, tetR family Amet_1503 PF12787 Amet_1503 Amet_1504 PF06445 GyrI-like small molecule binding domain Amet_1504 PF12833 Helix-turn-helix domain Amet_1505 PF14242 Amet_1505 Amet_1506 PF00072 Response regulator receiver domain Amet_1506 PF00486 Transcriptional regulatory protein, C terminal Amet_1507 PF00512 His Kinase A (phospho-acceptor) domain Amet_1507 PF00672 HAMP domain Amet_1507 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1509 PF01258 Prokaryotic dksA/traR C4-type zinc finger Amet_1509 PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Amet_1510 PF02629 CoA binding domain Amet_1510 PF06971 Putative DNA-binding protein N-terminus Amet_1511 PF13847 Methyltransferase domain Amet_1512 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amet_1513 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1514 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1515 PF00005 ABC transporter Amet_1515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_1516 PF13673 Acetyltransferase (GNAT) domain Amet_1518 PF00072 Response regulator receiver domain Amet_1518 PF00486 Transcriptional regulatory protein, C terminal Amet_1519 PF00512 His Kinase A (phospho-acceptor) domain Amet_1519 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1521 PF16576 Amet_1521 Amet_1522 PF00873 AcrB/AcrD/AcrF family Amet_1525 PF00391 PEP-utilising enzyme, mobile domain Amet_1525 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Amet_1526 PF07690 Major Facilitator Superfamily Amet_1527 PF13546 Amet_1527 Amet_1528 PF01610 Amet_1528 Amet_1528 PF13542 Amet_1528 Amet_1528 PF14690 Amet_1528 Amet_1529 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Amet_1530 PF02156 Glycosyl hydrolase family 26 Amet_1533 PF13546 Amet_1533 Amet_1534 PF00395 S-layer homology domain Amet_1534 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) Amet_1534 PF12733 Amet_1534 Amet_1534 PF14252 Amet_1534 Amet_1535 PF13546 Amet_1535 Amet_1536 PF00005 ABC transporter Amet_1537 PF13546 Amet_1537 Amet_1540 PF04073 Aminoacyl-tRNA editing domain Amet_1544 PF02517 CAAX protease self-immunity Amet_1545 PF00005 ABC transporter Amet_1547 PF00155 Aminotransferase class I and II Amet_1547 PF00392 Bacterial regulatory proteins, gntR family Amet_1548 PF09391 Protein of unknown function (DUF2000) Amet_1551 PF00890 FAD binding domain Amet_1551 PF04205 FMN-binding domain Amet_1552 PF13411 MerR HTH family regulatory protein Amet_1553 PF00005 ABC transporter Amet_1554 PF02687 Amet_1554 Amet_1554 PF12704 MacB-like periplasmic core domain Amet_1555 PF00005 ABC transporter Amet_1556 PF13437 HlyD family secretion protein Amet_1556 PF13533 Biotin-lipoyl like Amet_1557 PF07730 Histidine kinase Amet_1559 PF00072 Response regulator receiver domain Amet_1559 PF00196 Bacterial regulatory proteins, luxR family Amet_1560 PF04235 Amet_1560 Amet_1561 PF00144 Beta-lactamase Amet_1562 PF07670 Nucleoside recognition Amet_1565 PF03551 Transcriptional regulator PadR-like family Amet_1566 PF01098 Amet_1566 Amet_1570 PF00141 Peroxidase Amet_1573 PF00990 GGDEF domain Amet_1574 PF01381 Helix-turn-helix Amet_1575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_1575 PF02743 Cache domain Amet_1576 PF14027 Amet_1576 Amet_1578 PF01925 Amet_1578 Amet_1579 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Amet_1580 PF01613 Flavin reductase like domain Amet_1581 PF01381 Helix-turn-helix Amet_1582 PF13546 Amet_1582 Amet_1583 PF13599 Pentapeptide repeats (9 copies) Amet_1584 PF00072 Response regulator receiver domain Amet_1584 PF00196 Bacterial regulatory proteins, luxR family Amet_1586 PF03649 Amet_1586 Amet_1587 PF00005 ABC transporter Amet_1588 PF03551 Transcriptional regulator PadR-like family Amet_1589 PF02417 Amet_1589 Amet_1590 PF10282 Lactonase, 7-bladed beta-propeller Amet_1591 PF14277 Domain of unknown function (DUF4364) Amet_1592 PF00269 Small, acid-soluble spore proteins, alpha/beta type Amet_1593 PF00589 Phage integrase family Amet_1594 PF00589 Phage integrase family Amet_1595 PF00589 Phage integrase family Amet_1597 PF12844 Helix-turn-helix domain Amet_1598 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1601 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Amet_1601 PF08388 Amet_1601 Amet_1602 PF00239 Resolvase, N terminal domain Amet_1602 PF07508 Recombinase Amet_1602 PF13408 Recombinase zinc beta ribbon domain Amet_1603 PF13655 Amet_1603 Amet_1604 PF00665 Integrase core domain Amet_1604 PF13276 Amet_1604 Amet_1607 PF02384 N-6 DNA Methylase Amet_1607 PF12161 HsdM N-terminal domain Amet_1608 PF01420 Type I restriction modification DNA specificity domain Amet_1609 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Amet_1609 PF04851 Type III restriction enzyme, res subunit Amet_1609 PF12008 Type I restriction and modification enzyme - subunit R C terminal Amet_1610 PF00656 Caspase domain Amet_1610 PF04326 Divergent AAA domain Amet_1612 PF00872 Amet_1612 Amet_1614 PF01522 Polysaccharide deacetylase Amet_1615 PF02690 Amet_1615 Amet_1616 PF00155 Aminotransferase class I and II Amet_1617 PF01522 Polysaccharide deacetylase Amet_1618 PF01225 Mur ligase family, catalytic domain Amet_1618 PF02875 Mur ligase family, glutamate ligase domain Amet_1618 PF08245 Mur ligase middle domain Amet_1619 PF00436 Single-strand binding protein family Amet_1620 PF13185 GAF domain Amet_1621 PF00156 Phosphoribosyl transferase domain Amet_1622 PF01546 Peptidase family M20/M25/M40 Amet_1622 PF07687 Peptidase dimerisation domain Amet_1623 PF02517 CAAX protease self-immunity Amet_1624 PF13091 PLD-like domain Amet_1625 PF00269 Small, acid-soluble spore proteins, alpha/beta type Amet_1626 PF13649 Methyltransferase domain Amet_1627 PF00313 'Cold-shock' DNA-binding domain Amet_1628 PF01430 Hsp33 protein Amet_1629 PF08812 Amet_1629 Amet_1630 PF04286 Amet_1630 Amet_1631 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amet_1631 PF02824 TGS domain Amet_1631 PF03129 Anticodon binding domain Amet_1631 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Amet_1632 PF00004 ATPase family associated with various cellular activities (AAA) Amet_1632 PF01434 Peptidase family M41 Amet_1633 PF00707 Translation initiation factor IF-3, C-terminal domain Amet_1633 PF05198 Translation initiation factor IF-3, N-terminal domain Amet_1634 PF01632 Ribosomal protein L35 Amet_1635 PF00453 Ribosomal protein L20 Amet_1636 PF02386 Cation transport protein Amet_1637 PF02080 TrkA-C domain Amet_1637 PF02254 TrkA-N domain Amet_1638 PF00588 SpoU rRNA Methylase family Amet_1639 PF01409 tRNA synthetases class II core domain (F) Amet_1639 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Amet_1640 PF01588 Putative tRNA binding domain Amet_1640 PF03147 Ferredoxin-fold anticodon binding domain Amet_1640 PF03483 B3/4 domain Amet_1640 PF03484 tRNA synthetase B5 domain Amet_1641 PF05164 Cell division protein ZapA Amet_1642 PF01136 Amet_1642 Amet_1642 PF12392 Amet_1642 Amet_1643 PF01325 Iron dependent repressor, N-terminal DNA binding domain Amet_1643 PF02742 Iron dependent repressor, metal binding and dimerisation domain Amet_1644 PF00005 ABC transporter Amet_1645 PF00950 Amet_1645 Amet_1646 PF01297 Periplasmic solute binding protein family Amet_1647 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_1648 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Amet_1649 PF00291 Pyridoxal-phosphate dependent enzyme Amet_1649 PF00581 Rhodanese-like domain Amet_1650 PF00266 Aminotransferase class-V Amet_1651 PF01891 Cobalt uptake substrate-specific transmembrane region Amet_1652 PF02361 Cobalt transport protein Amet_1653 PF00005 ABC transporter Amet_1654 PF09335 Amet_1654 Amet_1655 PF07833 Copper amine oxidase N-terminal domain Amet_1656 PF01541 GIY-YIG catalytic domain Amet_1657 PF00465 Iron-containing alcohol dehydrogenase Amet_1659 PF00881 Nitroreductase family Amet_1660 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amet_1661 PF00037 4Fe-4S binding domain Amet_1661 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amet_1661 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amet_1662 PF00270 DEAD/DEAH box helicase Amet_1662 PF00271 Helicase conserved C-terminal domain Amet_1663 PF09704 CRISPR-associated protein (Cas_Cas5) Amet_1664 PF09709 Amet_1664 Amet_1665 PF05107 Amet_1665 Amet_1666 PF01930 Domain of unknown function DUF83 Amet_1667 PF01867 CRISPR associated protein Cas1 Amet_1668 PF09827 CRISPR associated protein Cas2 Amet_1669 PF03358 NADPH-dependent FMN reductase Amet_1670 PF00056 lactate/malate dehydrogenase, NAD binding domain Amet_1671 PF01467 Cytidylyltransferase Amet_1672 PF06271 Amet_1672 Amet_1673 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amet_1674 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1675 PF00005 ABC transporter Amet_1676 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amet_1676 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amet_1676 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amet_1676 PF10371 Domain of unknown function Amet_1676 PF13484 Amet_1676 Amet_1676 PF17147 Amet_1676 Amet_1677 PF02446 4-alpha-glucanotransferase Amet_1678 PF00343 Carbohydrate phosphorylase Amet_1679 PF02698 DUF218 domain Amet_1680 PF04266 ASCH domain Amet_1681 PF04542 Sigma-70 region 2 Amet_1681 PF08281 Sigma-70, region 4 Amet_1683 PF12655 Amet_1683 Amet_1684 PF00860 Permease family Amet_1686 PF01797 Transposase IS200 like Amet_1688 PF00005 ABC transporter Amet_1689 PF02687 Amet_1689 Amet_1690 PF06486 Protein of unknown function (DUF1093) Amet_1691 PF00072 Response regulator receiver domain Amet_1691 PF00486 Transcriptional regulatory protein, C terminal Amet_1692 PF00512 His Kinase A (phospho-acceptor) domain Amet_1692 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1694 PF04015 Amet_1694 Amet_1694 PF12838 4Fe-4S dicluster domain Amet_1695 PF00149 Calcineurin-like phosphoesterase Amet_1696 PF08960 Domain of unknown function (DUF1874) Amet_1697 PF00258 Flavodoxin Amet_1698 PF13420 Acetyltransferase (GNAT) domain Amet_1699 PF01963 Amet_1699 Amet_1700 PF00107 Zinc-binding dehydrogenase Amet_1701 PF00675 Insulinase (Peptidase family M16) Amet_1701 PF05193 Peptidase M16 inactive domain Amet_1701 PF08367 Peptidase M16C associated Amet_1702 PF00571 CBS domain Amet_1702 PF01368 DHH family Amet_1702 PF02833 DHHA2 domain Amet_1702 PF07085 DRTGG domain Amet_1704 PF00994 Probable molybdopterin binding domain Amet_1704 PF02464 Competence-damaged protein Amet_1705 PF13487 HD domain Amet_1706 PF01370 NAD dependent epimerase/dehydratase family Amet_1707 PF00163 Ribosomal protein S4/S9 N-terminal domain Amet_1707 PF01479 S4 domain Amet_1708 PF01168 Alanine racemase, N-terminal domain Amet_1708 PF14031 Putative serine dehydratase domain Amet_1709 PF13616 PPIC-type PPIASE domain Amet_1710 PF00009 Elongation factor Tu GTP binding domain Amet_1710 PF00679 Elongation factor G C-terminus Amet_1710 PF03144 Elongation factor Tu domain 2 Amet_1711 PF01522 Polysaccharide deacetylase Amet_1712 PF00488 MutS domain V Amet_1712 PF01713 Smr domain Amet_1713 PF04463 Amet_1713 Amet_1714 PF00750 tRNA synthetases class I (R) Amet_1714 PF03485 Arginyl tRNA synthetase N terminal domain Amet_1714 PF05746 DALR anticodon binding domain Amet_1715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_1715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amet_1718 PF01554 MatE Amet_1719 PF00882 Zinc dependent phospholipase C Amet_1721 PF08445 FR47-like protein Amet_1722 PF02310 B12 binding domain Amet_1722 PF04055 Radical SAM superfamily Amet_1722 PF13311 Amet_1722 Amet_1724 PF00583 Acetyltransferase (GNAT) family Amet_1725 PF07719 Tetratricopeptide repeat Amet_1725 PF13181 Tetratricopeptide repeat Amet_1726 PF01515 Phosphate acetyl/butaryl transferase Amet_1728 PF13489 Methyltransferase domain Amet_1729 PF12728 Helix-turn-helix domain Amet_1732 PF02872 5'-nucleotidase, C-terminal domain Amet_1733 PF00005 ABC transporter Amet_1733 PF08402 TOBE domain Amet_1734 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1735 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1736 PF13416 Bacterial extracellular solute-binding protein Amet_1737 PF00013 KH domain Amet_1737 PF00575 S1 RNA binding domain Amet_1737 PF01138 3' exoribonuclease family, domain 1 Amet_1737 PF03725 3' exoribonuclease family, domain 2 Amet_1737 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Amet_1742 PF09388 Spo0E like sporulation regulatory protein Amet_1743 PF04324 BFD-like [2Fe-2S] binding domain Amet_1746 PF01726 LexA DNA binding domain Amet_1751 PF11213 Protein of unknown function (DUF3006) Amet_1753 PF05598 Amet_1753 Amet_1755 PF00092 von Willebrand factor type A domain Amet_1755 PF00754 F5/8 type C domain Amet_1755 PF13240 Amet_1755 Amet_1757 PF01695 IstB-like ATP binding protein Amet_1757 PF08483 Amet_1757 Amet_1758 PF00665 Integrase core domain Amet_1760 PF13649 Methyltransferase domain Amet_1761 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Amet_1765 PF00665 Integrase core domain Amet_1766 PF01695 IstB-like ATP binding protein Amet_1769 PF00817 impB/mucB/samB family Amet_1769 PF11799 impB/mucB/samB family C-terminal domain Amet_1770 PF00072 Response regulator receiver domain Amet_1770 PF00486 Transcriptional regulatory protein, C terminal Amet_1771 PF00512 His Kinase A (phospho-acceptor) domain Amet_1771 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1771 PF07695 Amet_1771 Amet_1772 PF03646 FlaG protein Amet_1773 PF00139 Legume lectin domain Amet_1773 PF00395 S-layer homology domain Amet_1773 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) Amet_1773 PF13306 Leucine rich repeats (6 copies) Amet_1775 PF00892 EamA-like transporter family Amet_1777 PF05717 Amet_1777 Amet_1779 PF00440 Bacterial regulatory proteins, tetR family Amet_1780 PF00106 short chain dehydrogenase Amet_1782 PF00149 Calcineurin-like phosphoesterase Amet_1783 PF00398 Ribosomal RNA adenine dimethylase Amet_1785 PF00271 Helicase conserved C-terminal domain Amet_1785 PF04851 Type III restriction enzyme, res subunit Amet_1788 PF16472 Amet_1788 Amet_1789 PF13623 Amet_1789 Amet_1791 PF13358 DDE superfamily endonuclease Amet_1794 PF11148 Amet_1794 Amet_1798 PF04542 Sigma-70 region 2 Amet_1798 PF08281 Sigma-70, region 4 Amet_1799 PF14285 Amet_1799 Amet_1802 PF04542 Sigma-70 region 2 Amet_1802 PF08281 Sigma-70, region 4 Amet_1803 PF14285 Amet_1803 Amet_1812 PF01551 Peptidase family M23 Amet_1816 PF10694 Protein of unknown function (DUF2500) Amet_1821 PF13789 Amet_1821 Amet_1827 PF01022 Bacterial regulatory protein, arsR family Amet_1828 PF01758 Sodium Bile acid symporter family Amet_1829 PF06953 Arsenical resistance operon trans-acting repressor ArsD Amet_1830 PF02374 Anion-transporting ATPase Amet_1831 PF02374 Anion-transporting ATPase Amet_1833 PF07722 Peptidase C26 Amet_1834 PF03773 Amet_1834 Amet_1837 PF01022 Bacterial regulatory protein, arsR family Amet_1838 PF00266 Aminotransferase class-V Amet_1839 PF04060 Putative Fe-S cluster Amet_1840 PF03773 Amet_1840 Amet_1841 PF01022 Bacterial regulatory protein, arsR family Amet_1845 PF00392 Bacterial regulatory proteins, gntR family Amet_1846 PF00005 ABC transporter Amet_1851 PF04542 Sigma-70 region 2 Amet_1851 PF08281 Sigma-70, region 4 Amet_1855 PF14903 Amet_1855 Amet_1861 PF00753 Metallo-beta-lactamase superfamily Amet_1863 PF00881 Nitroreductase family Amet_1869 PF01541 GIY-YIG catalytic domain Amet_1873 PF01047 MarR family Amet_1874 PF11345 Amet_1874 Amet_1876 PF01380 SIS domain Amet_1876 PF01418 Helix-turn-helix domain, rpiR family Amet_1877 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1878 PF00528 Binding-protein-dependent transport system inner membrane component Amet_1878 PF12911 Amet_1878 Amet_1879 PF00005 ABC transporter Amet_1879 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_1880 PF00005 ABC transporter Amet_1880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_1881 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amet_1882 PF01244 Membrane dipeptidase (Peptidase family M19) Amet_1883 PF01979 Amidohydrolase family Amet_1884 PF03576 Peptidase family S58 Amet_1885 PF01758 Sodium Bile acid symporter family Amet_1886 PF01520 N-acetylmuramoyl-L-alanine amidase Amet_1886 PF07833 Copper amine oxidase N-terminal domain Amet_1886 PF11741 AMIN domain Amet_1887 PF03572 Peptidase family S41 Amet_1888 PF01609 Transposase DDE domain Amet_1891 PF04542 Sigma-70 region 2 Amet_1891 PF08281 Sigma-70, region 4 Amet_1894 PF09860 Amet_1894 Amet_1896 PF12867 DinB superfamily Amet_1897 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Amet_1897 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Amet_1899 PF07728 AAA domain (dynein-related subfamily) Amet_1900 PF00092 von Willebrand factor type A domain Amet_1901 PF01381 Helix-turn-helix Amet_1902 PF00132 Bacterial transferase hexapeptide (six repeats) Amet_1903 PF00005 ABC transporter Amet_1903 PF12848 ABC transporter Amet_1904 PF07690 Major Facilitator Superfamily Amet_1905 PF01636 Phosphotransferase enzyme family Amet_1907 PF12146 Putative lysophospholipase Amet_1908 PF00440 Bacterial regulatory proteins, tetR family Amet_1910 PF05598 Amet_1910 Amet_1911 PF12833 Helix-turn-helix domain Amet_1912 PF06983 3-demethylubiquinone-9 3-methyltransferase Amet_1913 PF00440 Bacterial regulatory proteins, tetR family Amet_1914 PF00391 PEP-utilising enzyme, mobile domain Amet_1914 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Amet_1915 PF00072 Response regulator receiver domain Amet_1915 PF00486 Transcriptional regulatory protein, C terminal Amet_1916 PF00512 His Kinase A (phospho-acceptor) domain Amet_1916 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1917 PF00072 Response regulator receiver domain Amet_1917 PF00486 Transcriptional regulatory protein, C terminal Amet_1918 PF00512 His Kinase A (phospho-acceptor) domain Amet_1918 PF00672 HAMP domain Amet_1918 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1919 PF00005 ABC transporter Amet_1920 PF12730 Amet_1920 Amet_1921 PF01381 Helix-turn-helix Amet_1921 PF12844 Helix-turn-helix domain Amet_1924 PF09299 Mu transposase, C-terminal Amet_1927 PF13401 AAA domain Amet_1931 PF04014 Antidote-toxin recognition MazE Amet_1933 PF06252 Amet_1933 Amet_1936 PF04542 Sigma-70 region 2 Amet_1936 PF13384 Homeodomain-like domain Amet_1943 PF06725 3D domain Amet_1944 PF09992 Predicted periplasmic protein (DUF2233) Amet_1945 PF01520 N-acetylmuramoyl-L-alanine amidase Amet_1946 PF08765 Mor transcription activator family Amet_1950 PF11985 Amet_1950 Amet_1951 PF00467 KOW motif Amet_1951 PF02357 Transcription termination factor nusG Amet_1953 PF06381 Amet_1953 Amet_1954 PF04233 Amet_1954 Amet_1955 PF09979 Amet_1955 Amet_1957 PF09950 Amet_1957 Amet_1959 PF13262 Amet_1959 Amet_1963 PF11863 Amet_1963 Amet_1967 PF10145 Amet_1967 Amet_1973 PF04865 Amet_1973 Amet_1977 PF09693 Amet_1977 Amet_1979 PF13472 GDSL-like Lipase/Acylhydrolase family Amet_1980 PF03062 Amet_1980 Amet_1981 PF14286 DHHW protein Amet_1982 PF01520 N-acetylmuramoyl-L-alanine amidase Amet_1983 PF03358 NADPH-dependent FMN reductase Amet_1985 PF07883 Cupin domain Amet_1986 PF01228 Glycine radical Amet_1986 PF02901 Pyruvate formate lyase Amet_1987 PF04055 Radical SAM superfamily Amet_1987 PF13353 4Fe-4S single cluster domain Amet_1991 PF01936 NYN domain Amet_1991 PF12872 OST-HTH/LOTUS domain Amet_1992 PF00512 His Kinase A (phospho-acceptor) domain Amet_1992 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_1993 PF00072 Response regulator receiver domain Amet_1993 PF00486 Transcriptional regulatory protein, C terminal Amet_1994 PF14262 Domain of unknown function (DUF4353) Amet_1995 PF08757 Amet_1995 Amet_1996 PF09359 VTC domain Amet_1997 PF16316 Amet_1997 Amet_1998 PF12799 Leucine Rich repeats (2 copies) Amet_1999 PF13673 Acetyltransferase (GNAT) domain Amet_2000 PF04542 Sigma-70 region 2 Amet_2000 PF08281 Sigma-70, region 4 Amet_2002 PF00005 ABC transporter Amet_2003 PF12679 Amet_2003 Amet_2004 PF12679 Amet_2004 Amet_2005 PF00528 Binding-protein-dependent transport system inner membrane component Amet_2006 PF00528 Binding-protein-dependent transport system inner membrane component Amet_2007 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amet_2008 PF00005 ABC transporter Amet_2008 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_2009 PF00005 ABC transporter Amet_2009 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_2010 PF08241 Methyltransferase domain Amet_2011 PF00266 Aminotransferase class-V Amet_2012 PF04060 Putative Fe-S cluster Amet_2013 PF01022 Bacterial regulatory protein, arsR family Amet_2016 PF03063 Prismane/CO dehydrogenase family Amet_2017 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_2018 PF01268 Formate--tetrahydrofolate ligase Amet_2019 PF04961 Formiminotransferase-cyclodeaminase Amet_2020 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Amet_2020 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Amet_2021 PF12225 Amet_2021 Amet_2022 PF02219 Methylenetetrahydrofolate reductase Amet_2023 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Amet_2023 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amet_2024 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_2025 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit Amet_2026 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit Amet_2026 PF04060 Putative Fe-S cluster Amet_2027 PF00809 Pterin binding enzyme Amet_2028 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit Amet_2029 PF01597 Glycine cleavage H-protein Amet_2030 PF00111 2Fe-2S iron-sulfur cluster binding domain Amet_2030 PF14574 Domain of unknown function (DUF4445) Amet_2031 PF12654 Amet_2031 Amet_2033 PF12953 Amet_2033 Amet_2034 PF10133 Amet_2034 Amet_2035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amet_2036 PF00528 Binding-protein-dependent transport system inner membrane component Amet_2037 PF00528 Binding-protein-dependent transport system inner membrane component Amet_2038 PF00005 ABC transporter Amet_2038 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_2039 PF00005 ABC transporter Amet_2040 PF13463 Winged helix DNA-binding domain Amet_2041 PF05368 NmrA-like family Amet_2042 PF01464 Transglycosylase SLT domain Amet_2045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amet_2046 PF00528 Binding-protein-dependent transport system inner membrane component Amet_2047 PF00528 Binding-protein-dependent transport system inner membrane component Amet_2048 PF00005 ABC transporter Amet_2049 PF00005 ABC transporter Amet_2051 PF05971 Protein of unknown function (DUF890) Amet_2053 PF13393 Histidyl-tRNA synthetase Amet_2054 PF13535 ATP-grasp domain Amet_2055 PF13535 ATP-grasp domain Amet_2056 PF01554 MatE Amet_2058 PF01464 Transglycosylase SLT domain Amet_2059 PF07883 Cupin domain Amet_2060 PF00158 Sigma-54 interaction domain Amet_2060 PF02954 Bacterial regulatory protein, Fis family Amet_2061 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amet_2062 PF00528 Binding-protein-dependent transport system inner membrane component Amet_2063 PF00528 Binding-protein-dependent transport system inner membrane component Amet_2063 PF12911 Amet_2063 Amet_2064 PF00005 ABC transporter Amet_2064 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_2065 PF00005 ABC transporter Amet_2065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_2066 PF00877 NlpC/P60 family Amet_2066 PF13354 Beta-lactamase enzyme family Amet_2067 PF01979 Amidohydrolase family Amet_2068 PF04951 D-aminopeptidase Amet_2069 PF00072 Response regulator receiver domain Amet_2069 PF00512 His Kinase A (phospho-acceptor) domain Amet_2069 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_2069 PF08447 PAS fold Amet_2069 PF13426 PAS domain Amet_2070 PF00440 Bacterial regulatory proteins, tetR family Amet_2072 PF01047 MarR family Amet_2074 PF13458 Periplasmic binding protein Amet_2075 PF02653 Amet_2075 Amet_2076 PF02653 Amet_2076 Amet_2077 PF00005 ABC transporter Amet_2077 PF12399 Branched-chain amino acid ATP-binding cassette transporter Amet_2078 PF00005 ABC transporter Amet_2079 PF02696 Amet_2079 Amet_2080 PF00795 Carbon-nitrogen hydrolase Amet_2082 PF01381 Helix-turn-helix Amet_2084 PF00440 Bacterial regulatory proteins, tetR family Amet_2085 PF00809 Pterin binding enzyme Amet_2086 PF02310 B12 binding domain Amet_2086 PF02607 B12 binding domain Amet_2087 PF01208 Uroporphyrinogen decarboxylase (URO-D) Amet_2089 PF13347 MFS/sugar transport protein Amet_2090 PF07670 Nucleoside recognition Amet_2092 PF00809 Pterin binding enzyme Amet_2093 PF02310 B12 binding domain Amet_2093 PF02607 B12 binding domain Amet_2094 PF13347 MFS/sugar transport protein Amet_2095 PF01208 Uroporphyrinogen decarboxylase (URO-D) Amet_2097 PF02310 B12 binding domain Amet_2097 PF02607 B12 binding domain Amet_2098 PF00392 Bacterial regulatory proteins, gntR family Amet_2098 PF07702 UTRA domain Amet_2099 PF00111 2Fe-2S iron-sulfur cluster binding domain Amet_2099 PF14574 Domain of unknown function (DUF4445) Amet_2100 PF10050 Amet_2100 Amet_2101 PF07796 Amet_2101 Amet_2103 PF11188 Amet_2103 Amet_2104 PF13443 Cro/C1-type HTH DNA-binding domain Amet_2109 PF13443 Cro/C1-type HTH DNA-binding domain Amet_2113 PF01695 IstB-like ATP binding protein Amet_2114 PF00665 Integrase core domain Amet_2116 PF01381 Helix-turn-helix Amet_2119 PF01695 IstB-like ATP binding protein Amet_2120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Amet_2121 PF02517 CAAX protease self-immunity Amet_2122 PF00082 Subtilase family Amet_2124 PF02452 PemK-like protein Amet_2129 PF12724 Flavodoxin domain Amet_2130 PF13673 Acetyltransferase (GNAT) domain Amet_2131 PF00583 Acetyltransferase (GNAT) family Amet_2132 PF01548 Amet_2132 Amet_2132 PF02371 Amet_2132 Amet_2134 PF13650 Aspartyl protease Amet_2136 PF11148 Amet_2136 Amet_2137 PF07872 Amet_2137 Amet_2139 PF08291 Peptidase M15 Amet_2142 PF03747 ADP-ribosylglycohydrolase Amet_2143 PF13391 Amet_2143 Amet_2144 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Amet_2144 PF04545 Sigma-70, region 4 Amet_2145 PF02195 ParB-like nuclease domain Amet_2146 PF00176 SNF2 family N-terminal domain Amet_2146 PF00271 Helicase conserved C-terminal domain Amet_2146 PF13091 PLD-like domain Amet_2149 PF04542 Sigma-70 region 2 Amet_2149 PF08281 Sigma-70, region 4 Amet_2151 PF13835 Amet_2151 Amet_2152 PF13555 P-loop containing region of AAA domain Amet_2152 PF13558 Putative exonuclease SbcCD, C subunit Amet_2153 PF09983 Amet_2153 Amet_2155 PF00924 Mechanosensitive ion channel Amet_2156 PF01966 HD domain Amet_2157 PF00117 Glutamine amidotransferase class-I Amet_2158 PF00425 chorismate binding enzyme Amet_2158 PF04715 Anthranilate synthase component I, N terminal region Amet_2159 PF01063 Aminotransferase class IV Amet_2160 PF01227 GTP cyclohydrolase I Amet_2161 PF00809 Pterin binding enzyme Amet_2162 PF02152 Dihydroneopterin aldolase Amet_2163 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Amet_2164 PF00793 DAHP synthetase I family Amet_2165 PF00079 Serpin (serine protease inhibitor) Amet_2166 PF08141 Amet_2166 Amet_2170 PF01145 SPFH domain / Band 7 family Amet_2170 PF15975 Amet_2170 Amet_2171 PF03129 Anticodon binding domain Amet_2171 PF13393 Histidyl-tRNA synthetase Amet_2172 PF00990 GGDEF domain Amet_2172 PF08448 PAS fold Amet_2173 PF01871 AMMECR1 Amet_2173 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Amet_2174 PF04055 Radical SAM superfamily Amet_2174 PF13353 4Fe-4S single cluster domain Amet_2175 PF00005 ABC transporter Amet_2175 PF00664 ABC transporter transmembrane region Amet_2176 PF00005 ABC transporter Amet_2176 PF00664 ABC transporter transmembrane region Amet_2178 PF13624 SurA N-terminal domain Amet_2179 PF02096 60Kd inner membrane protein Amet_2180 PF01594 Amet_2180 Amet_2181 PF04607 Region found in RelA / SpoT proteins Amet_2182 PF00520 Ion transport protein Amet_2183 PF00905 Penicillin binding protein transpeptidase domain Amet_2183 PF00912 Transglycosylase Amet_2184 PF00239 Resolvase, N terminal domain Amet_2186 PF12844 Helix-turn-helix domain Amet_2187 PF08279 HTH domain Amet_2187 PF13280 Amet_2187 Amet_2188 PF05598 Amet_2188 Amet_2189 PF01881 CRISPR associated protein Cas6 Amet_2190 PF09706 Amet_2190 Amet_2191 PF01905 CRISPR-associated negative auto-regulator DevR/Csa2 Amet_2192 PF09704 CRISPR-associated protein (Cas_Cas5) Amet_2193 PF00271 Helicase conserved C-terminal domain Amet_2193 PF01966 HD domain Amet_2194 PF01930 Domain of unknown function DUF83 Amet_2195 PF01867 CRISPR associated protein Cas1 Amet_2196 PF09827 CRISPR associated protein Cas2 Amet_2199 PF01863 Protein of unknown function DUF45 Amet_2200 PF13482 RNase_H superfamily Amet_2201 PF00395 S-layer homology domain Amet_2202 PF00580 UvrD/REP helicase N-terminal domain Amet_2202 PF13361 UvrD-like helicase C-terminal domain Amet_2203 PF00710 Asparaginase Amet_2204 PF02589 Uncharacterised ACR, YkgG family COG1556 Amet_2205 PF00266 Aminotransferase class-V Amet_2206 PF02568 Thiamine biosynthesis protein (ThiI) Amet_2206 PF02926 THUMP domain Amet_2207 PF01967 MoaC family Amet_2208 PF00994 Probable molybdopterin binding domain Amet_2209 PF04020 Amet_2209 Amet_2210 PF04055 Radical SAM superfamily Amet_2210 PF13353 4Fe-4S single cluster domain Amet_2211 PF01228 Glycine radical Amet_2211 PF02901 Pyruvate formate lyase Amet_2212 PF01740 STAS domain Amet_2213 PF13581 Histidine kinase-like ATPase domain Amet_2214 PF04539 Sigma-70 region 3 Amet_2214 PF04542 Sigma-70 region 2 Amet_2214 PF04545 Sigma-70, region 4 Amet_2216 PF12164 Stage V sporulation protein AA Amet_2217 PF13782 Amet_2217 Amet_2219 PF03862 Amet_2219 Amet_2220 PF07451 Stage V sporulation protein AD (SpoVAD) Amet_2221 PF03862 Amet_2221 Amet_2222 PF14097 Amet_2222 Amet_2223 PF00905 Penicillin binding protein transpeptidase domain Amet_2223 PF00912 Transglycosylase Amet_2224 PF09560 Amet_2224 Amet_2225 PF01926 50S ribosome-binding GTPase Amet_2225 PF13167 Amet_2225 Amet_2225 PF16360 Amet_2225 Amet_2226 PF13646 HEAT repeats Amet_2227 PF11385 Amet_2227 Amet_2229 PF01205 Uncharacterized protein family UPF0029 Amet_2229 PF09186 Domain of unknown function (DUF1949) Amet_2230 PF13380 CoA binding domain Amet_2231 PF01925 Amet_2231 Amet_2232 PF01925 Amet_2232 Amet_2233 PF00291 Pyridoxal-phosphate dependent enzyme Amet_2234 PF02540 NAD synthase Amet_2235 PF01709 Transcriptional regulator Amet_2237 PF00589 Phage integrase family Amet_2237 PF13495 Phage integrase, N-terminal SAM-like domain Amet_2240 PF10706 Aminoglycoside-2''-adenylyltransferase Amet_2241 PF13302 Acetyltransferase (GNAT) domain Amet_2242 PF01636 Phosphotransferase enzyme family Amet_2244 PF00583 Acetyltransferase (GNAT) family Amet_2250 PF13546 Amet_2250 Amet_2252 PF00583 Acetyltransferase (GNAT) family Amet_2253 PF05598 Amet_2253 Amet_2257 PF01381 Helix-turn-helix Amet_2258 PF13302 Acetyltransferase (GNAT) domain Amet_2261 PF13673 Acetyltransferase (GNAT) domain Amet_2262 PF12710 haloacid dehalogenase-like hydrolase Amet_2264 PF01541 GIY-YIG catalytic domain Amet_2267 PF07799 Amet_2267 Amet_2268 PF13546 Amet_2268 Amet_2269 PF01243 Pyridoxamine 5'-phosphate oxidase Amet_2275 PF07085 DRTGG domain Amet_2276 PF13581 Histidine kinase-like ATPase domain Amet_2277 PF07085 DRTGG domain Amet_2278 PF02811 PHP domain Amet_2279 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_2280 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Amet_2280 PF10531 SLBB domain Amet_2280 PF13183 4Fe-4S dicluster domain Amet_2280 PF13375 RnfC Barrel sandwich hybrid domain Amet_2281 PF03116 Amet_2281 Amet_2282 PF04205 FMN-binding domain Amet_2283 PF02508 Amet_2283 Amet_2284 PF02508 Amet_2284 Amet_2285 PF04060 Putative Fe-S cluster Amet_2285 PF12838 4Fe-4S dicluster domain Amet_2285 PF14697 4Fe-4S dicluster domain Amet_2286 PF07456 Amet_2286 Amet_2287 PF14209 Amet_2287 Amet_2288 PF02545 Maf-like protein Amet_2289 PF04002 RadC-like JAB domain Amet_2290 PF06723 MreB/Mbl protein Amet_2291 PF04085 rod shape-determining protein MreC Amet_2292 PF04093 Amet_2292 Amet_2293 PF00905 Penicillin binding protein transpeptidase domain Amet_2293 PF03717 Penicillin-binding Protein dimerisation domain Amet_2294 PF03775 Septum formation inhibitor MinC, C-terminal domain Amet_2295 PF13614 AAA domain Amet_2296 PF03776 Septum formation topological specificity factor MinE Amet_2297 PF02142 MGS-like domain Amet_2298 PF01551 Peptidase family M23 Amet_2299 PF02163 Peptidase family M50 Amet_2300 PF04055 Radical SAM superfamily Amet_2301 PF10105 Amet_2301 Amet_2302 PF10150 Ribonuclease E/G family Amet_2303 PF00829 Ribosomal prokaryotic L21 protein Amet_2304 PF04327 Protein of unknown function (DUF464) Amet_2305 PF01016 Ribosomal L27 protein Amet_2306 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Amet_2307 PF01018 GTP1/OBG Amet_2307 PF01926 50S ribosome-binding GTPase Amet_2307 PF09269 Domain of unknown function (DUF1967) Amet_2308 PF01985 CRS1 / YhbY (CRM) domain Amet_2309 PF01467 Cytidylyltransferase Amet_2310 PF01966 HD domain Amet_2311 PF03816 Cell envelope-related transcriptional attenuator domain Amet_2311 PF13399 LytR cell envelope-related transcriptional attenuator Amet_2312 PF01699 Sodium/calcium exchanger protein Amet_2313 PF02410 Oligomerisation domain Amet_2314 PF00133 tRNA synthetases class I (I, L, M and V) Amet_2314 PF08264 Anticodon-binding domain of tRNA Amet_2314 PF09334 tRNA synthetases class I (M) Amet_2314 PF13603 Leucyl-tRNA synthetase, Domain 2 Amet_2315 PF08348 Amet_2315 Amet_2315 PF13309 Amet_2315 Amet_2316 PF01042 Endoribonuclease L-PSP Amet_2317 PF01842 ACT domain Amet_2317 PF03315 Serine dehydratase beta chain Amet_2318 PF03313 Amet_2318 Amet_2319 PF00768 D-alanyl-D-alanine carboxypeptidase Amet_2319 PF07943 Penicillin-binding protein 5, C-terminal domain Amet_2320 PF10531 SLBB domain Amet_2320 PF12836 Helix-hairpin-helix motif Amet_2321 PF00586 AIR synthase related protein, N-terminal domain Amet_2321 PF02769 AIR synthase related protein, C-terminal domain Amet_2322 PF01235 Amet_2322 Amet_2323 PF03841 L-seryl-tRNA selenium transferase Amet_2323 PF12390 Amet_2323 Amet_2324 PF00009 Elongation factor Tu GTP binding domain Amet_2324 PF03144 Elongation factor Tu domain 2 Amet_2324 PF09106 Elongation factor SelB, winged helix Amet_2324 PF09107 Elongation factor SelB, winged helix Amet_2325 PF00072 Response regulator receiver domain Amet_2325 PF00486 Transcriptional regulatory protein, C terminal Amet_2326 PF00512 His Kinase A (phospho-acceptor) domain Amet_2326 PF00672 HAMP domain Amet_2326 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_2327 PF10646 Amet_2327 Amet_2331 PF12146 Putative lysophospholipase Amet_2332 PF01416 tRNA pseudouridine synthase Amet_2333 PF01475 Ferric uptake regulator family Amet_2334 PF04070 Amet_2334 Amet_2336 PF08955 BofC C-terminal domain Amet_2337 PF02075 Crossover junction endodeoxyribonuclease RuvC Amet_2338 PF01330 RuvA N terminal domain Amet_2338 PF07499 RuvA, C-terminal domain Amet_2338 PF14520 Helix-hairpin-helix domain Amet_2339 PF05491 Holliday junction DNA helicase ruvB C-terminus Amet_2339 PF05496 Holliday junction DNA helicase ruvB N-terminus Amet_2340 PF08486 Amet_2340 Amet_2341 PF02547 Queuosine biosynthesis protein Amet_2342 PF01702 Queuine tRNA-ribosyltransferase Amet_2343 PF02699 Preprotein translocase subunit Amet_2344 PF12670 Amet_2344 Amet_2345 PF13165 Amet_2345 Amet_2346 PF04055 Radical SAM superfamily Amet_2346 PF13186 Iron-sulfur cluster-binding domain Amet_2346 PF13353 4Fe-4S single cluster domain Amet_2347 PF00132 Bacterial transferase hexapeptide (six repeats) Amet_2348 PF02355 Protein export membrane protein Amet_2349 PF02355 Protein export membrane protein Amet_2349 PF07549 SecD/SecF GG Motif Amet_2350 PF03109 Amet_2350 Amet_2351 PF01368 DHH family Amet_2351 PF02272 DHHA1 domain Amet_2351 PF10141 Amet_2351 Amet_2352 PF00156 Phosphoribosyl transferase domain Amet_2353 PF02824 TGS domain Amet_2353 PF04607 Region found in RelA / SpoT proteins Amet_2353 PF13291 ACT domain Amet_2353 PF13328 HD domain Amet_2354 PF02580 D-Tyr-tRNA(Tyr) deacylase Amet_2355 PF00753 Metallo-beta-lactamase superfamily Amet_2357 PF04055 Radical SAM superfamily Amet_2358 PF03129 Anticodon binding domain Amet_2358 PF13393 Histidyl-tRNA synthetase Amet_2359 PF00152 tRNA synthetases class II (D, K and N) Amet_2359 PF01336 OB-fold nucleic acid binding domain Amet_2359 PF02938 GAD domain Amet_2360 PF10087 Amet_2360 Amet_2361 PF00899 ThiF family Amet_2362 PF04246 Amet_2362 Amet_2363 PF12821 Amet_2363 Amet_2364 PF06738 Amet_2364 Amet_2365 PF00464 Serine hydroxymethyltransferase Amet_2366 PF00158 Sigma-54 interaction domain Amet_2366 PF02954 Bacterial regulatory protein, Fis family Amet_2366 PF08448 PAS fold Amet_2367 PF01113 Dihydrodipicolinate reductase, N-terminus Amet_2369 PF00291 Pyridoxal-phosphate dependent enzyme Amet_2370 PF16552 Amet_2370 Amet_2371 PF02310 B12 binding domain Amet_2371 PF09043 D-Lysine 5,6-aminomutase alpha subunit Amet_2371 PF16554 Amet_2371 Amet_2372 PF13941 Amet_2372 Amet_2373 PF01168 Alanine racemase, N-terminal domain Amet_2377 PF00239 Resolvase, N terminal domain Amet_2377 PF07508 Recombinase Amet_2377 PF13408 Recombinase zinc beta ribbon domain Amet_2382 PF00004 ATPase family associated with various cellular activities (AAA) Amet_2383 PF00082 Subtilase family Amet_2386 PF06114 Domain of unknown function (DUF955) Amet_2388 PF01381 Helix-turn-helix Amet_2389 PF01381 Helix-turn-helix Amet_2392 PF12844 Helix-turn-helix domain Amet_2393 PF09643 YopX protein Amet_2396 PF10065 Amet_2396 Amet_2404 PF00269 Small, acid-soluble spore proteins, alpha/beta type Amet_2406 PF01471 Putative peptidoglycan binding domain Amet_2407 PF00589 Phage integrase family Amet_2408 PF10668 Amet_2408 Amet_2409 PF01844 HNH endonuclease Amet_2411 PF03354 Amet_2411 Amet_2412 PF04860 Phage portal protein Amet_2413 PF04586 Amet_2413 Amet_2414 PF05065 Phage capsid family Amet_2416 PF05135 Phage gp6-like head-tail connector protein Amet_2417 PF05521 Phage head-tail joining protein Amet_2418 PF04883 Amet_2418 Amet_2420 PF04984 Phage tail sheath protein Amet_2420 PF17482 Amet_2420 Amet_2421 PF09393 Protein of unknown function (DUF2001) Amet_2422 PF08890 Phage XkdN-like protein Amet_2428 PF10844 Amet_2428 Amet_2429 PF10934 Amet_2429 Amet_2430 PF04865 Amet_2430 Amet_2431 PF10076 Amet_2431 Amet_2436 PF09693 Amet_2436 Amet_2437 PF05105 Amet_2437 Amet_2438 PF01520 N-acetylmuramoyl-L-alanine amidase Amet_2440 PF02086 D12 class N6 adenine-specific DNA methyltransferase Amet_2443 PF10710 Amet_2443 Amet_2444 PF09388 Spo0E like sporulation regulatory protein Amet_2445 PF01212 Beta-eliminating lyase Amet_2446 PF05496 Holliday junction DNA helicase ruvB N-terminus Amet_2446 PF12002 MgsA AAA+ ATPase C terminal Amet_2446 PF16193 Amet_2446 Amet_2447 PF11823 Amet_2447 Amet_2450 PF00188 Cysteine-rich secretory protein family Amet_2451 PF04321 RmlD substrate binding domain Amet_2452 PF02082 Transcriptional regulator Amet_2453 PF00266 Aminotransferase class-V Amet_2454 PF01592 NifU-like N terminal domain Amet_2455 PF05239 PRC-barrel domain Amet_2457 PF01594 Amet_2457 Amet_2458 PF01411 tRNA synthetases class II (A) Amet_2458 PF02272 DHHA1 domain Amet_2458 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Amet_2459 PF06135 Amet_2459 Amet_2461 PF00037 4Fe-4S binding domain Amet_2461 PF00248 Aldo/keto reductase family Amet_2462 PF03652 Uncharacterised protein family (UPF0081) Amet_2463 PF06949 Amet_2463 Amet_2465 PF03749 Sugar fermentation stimulation protein Amet_2466 PF01475 Ferric uptake regulator family Amet_2467 PF00753 Metallo-beta-lactamase superfamily Amet_2467 PF07521 RNA-metabolising metallo-beta-lactamase Amet_2468 PF03956 Amet_2468 Amet_2469 PF03956 Amet_2469 Amet_2470 PF01596 O-methyltransferase Amet_2471 PF01136 Amet_2471 Amet_2471 PF16325 Amet_2471 Amet_2472 PF00485 Phosphoribulokinase / Uridine kinase family Amet_2473 PF00905 Penicillin binding protein transpeptidase domain Amet_2474 PF04542 Sigma-70 region 2 Amet_2475 PF00239 Resolvase, N terminal domain Amet_2475 PF07508 Recombinase Amet_2475 PF13408 Recombinase zinc beta ribbon domain Amet_2480 PF04545 Sigma-70, region 4 Amet_2482 PF08282 haloacid dehalogenase-like hydrolase Amet_2482 PF13242 HAD-hyrolase-like Amet_2483 PF07963 Prokaryotic N-terminal methylation motif Amet_2484 PF07963 Prokaryotic N-terminal methylation motif Amet_2485 PF07963 Prokaryotic N-terminal methylation motif Amet_2487 PF10719 Amet_2487 Amet_2489 PF00557 Metallopeptidase family M24 Amet_2489 PF01321 Creatinase/Prolidase N-terminal domain Amet_2490 PF01132 Elongation factor P (EF-P) OB domain Amet_2490 PF08207 Elongation factor P (EF-P) KOW-like domain Amet_2490 PF09285 Elongation factor P, C-terminal Amet_2493 PF09548 Amet_2493 Amet_2494 PF06686 Amet_2494 Amet_2495 PF06686 Amet_2495 Amet_2496 PF09546 Amet_2496 Amet_2497 PF09581 Amet_2497 Amet_2499 PF12685 SpoIIIAH-like protein Amet_2500 PF03780 Amet_2500 Amet_2501 PF01029 NusB family Amet_2502 PF00814 Glycoprotease family Amet_2503 PF02601 Amet_2503 Amet_2503 PF13742 Amet_2503 Amet_2504 PF02609 Exonuclease VII small subunit Amet_2505 PF00348 Polyprenyl synthetase Amet_2506 PF02681 Amet_2506 Amet_2508 PF02779 Transketolase, pyrimidine binding domain Amet_2508 PF02780 Transketolase, C-terminal domain Amet_2508 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Amet_2509 PF01479 S4 domain Amet_2509 PF01728 FtsJ-like methyltransferase Amet_2510 PF01316 Arginine repressor, DNA binding domain Amet_2510 PF02863 Arginine repressor, C-terminal domain Amet_2511 PF02463 RecF/RecN/SMC N terminal domain Amet_2512 PF05580 Amet_2512 Amet_2513 PF00072 Response regulator receiver domain Amet_2513 PF08769 Sporulation initiation factor Spo0A C terminal Amet_2514 PF00929 Exonuclease Amet_2515 PF02631 RecX family Amet_2516 PF12555 Amet_2516 Amet_2517 PF11382 Amet_2517 Amet_2518 PF00535 Glycosyl transferase family 2 Amet_2519 PF00953 Glycosyl transferase family 4 Amet_2520 PF12982 Amet_2520 Amet_2521 PF00293 NUDIX domain Amet_2522 PF01944 Amet_2522 Amet_2523 PF00589 Phage integrase family Amet_2523 PF02899 Phage integrase, N-terminal SAM-like domain Amet_2524 PF01676 Metalloenzyme superfamily Amet_2525 PF01048 Phosphorylase superfamily Amet_2526 PF01048 Phosphorylase superfamily Amet_2527 PF00591 Glycosyl transferase family, a/b domain Amet_2527 PF02885 Glycosyl transferase family, helical bundle domain Amet_2527 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Amet_2528 PF00768 D-alanyl-D-alanine carboxypeptidase Amet_2528 PF07943 Penicillin-binding protein 5, C-terminal domain Amet_2529 PF00571 CBS domain Amet_2529 PF01368 DHH family Amet_2529 PF01743 Poly A polymerase head domain Amet_2529 PF02272 DHHA1 domain Amet_2529 PF12627 Probable RNA and SrmB- binding site of polymerase A Amet_2530 PF02163 Peptidase family M50 Amet_2531 PF02616 ScpA/B protein Amet_2532 PF04079 Putative transcriptional regulators (Ypuh-like) Amet_2533 PF03807 NADP oxidoreductase coenzyme F420-dependent Amet_2533 PF14748 Pyrroline-5-carboxylate reductase dimerisation Amet_2534 PF00589 Phage integrase family Amet_2535 PF00717 Peptidase S24-like Amet_2535 PF01726 LexA DNA binding domain Amet_2536 PF05598 Amet_2536 Amet_2537 PF06838 Methionine gamma-lyase Amet_2539 PF01926 50S ribosome-binding GTPase Amet_2540 PF00004 ATPase family associated with various cellular activities (AAA) Amet_2541 PF17209 Amet_2541 Amet_2542 PF01715 IPP transferase Amet_2543 PF01119 DNA mismatch repair protein, C-terminal domain Amet_2543 PF08676 MutL C terminal dimerisation domain Amet_2543 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_2544 PF00488 MutS domain V Amet_2544 PF01624 MutS domain I Amet_2544 PF05188 MutS domain II Amet_2544 PF05190 MutS family domain IV Amet_2544 PF05192 MutS domain III Amet_2545 PF00919 Uncharacterized protein family UPF0004 Amet_2545 PF01938 TRAM domain Amet_2545 PF04055 Radical SAM superfamily Amet_2546 PF09682 Amet_2546 Amet_2548 PF01510 N-acetylmuramoyl-L-alanine amidase Amet_2548 PF05036 Sporulation related domain Amet_2549 PF10779 Amet_2549 Amet_2550 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Amet_2552 PF05635 23S rRNA-intervening sequence protein Amet_2553 PF03781 Sulfatase-modifying factor enzyme 1 Amet_2558 PF10076 Amet_2558 Amet_2559 PF04865 Amet_2559 Amet_2560 PF10934 Amet_2560 Amet_2563 PF01476 LysM domain Amet_2564 PF10145 Amet_2564 Amet_2566 PF08890 Phage XkdN-like protein Amet_2567 PF09393 Protein of unknown function (DUF2001) Amet_2568 PF04984 Phage tail sheath protein Amet_2568 PF17481 Amet_2568 Amet_2568 PF17482 Amet_2568 Amet_2575 PF09956 Amet_2575 Amet_2578 PF05133 Phage portal protein, SPP1 Gp6-like Amet_2582 PF01555 DNA methylase Amet_2582 PF02195 ParB-like nuclease domain Amet_2584 PF16784 Amet_2584 Amet_2585 PF00436 Single-strand binding protein family Amet_2598 PF06356 Amet_2598 Amet_2599 PF13392 HNH endonuclease Amet_2601 PF01695 IstB-like ATP binding protein Amet_2602 PF07261 Replication initiation and membrane attachment Amet_2602 PF13730 Amet_2602 Amet_2603 PF12706 Beta-lactamase superfamily domain Amet_2604 PF03837 Amet_2604 Amet_2606 PF13476 AAA domain Amet_2612 PF01381 Helix-turn-helix Amet_2613 PF01381 Helix-turn-helix Amet_2616 PF00239 Resolvase, N terminal domain Amet_2616 PF07508 Recombinase Amet_2616 PF13408 Recombinase zinc beta ribbon domain Amet_2618 PF00155 Aminotransferase class I and II Amet_2619 PF13411 MerR HTH family regulatory protein Amet_2620 PF05343 M42 glutamyl aminopeptidase Amet_2621 PF05343 M42 glutamyl aminopeptidase Amet_2622 PF05343 M42 glutamyl aminopeptidase Amet_2623 PF01739 CheR methyltransferase, SAM binding domain Amet_2623 PF03705 CheR methyltransferase, all-alpha domain Amet_2624 PF00575 S1 RNA binding domain Amet_2625 PF02401 LytB protein Amet_2626 PF01553 Acyltransferase Amet_2627 PF02224 Cytidylate kinase Amet_2629 PF03486 HI0933-like protein Amet_2630 PF00300 Histidine phosphatase superfamily (branch 1) Amet_2631 PF01380 SIS domain Amet_2631 PF01418 Helix-turn-helix domain, rpiR family Amet_2632 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amet_2633 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amet_2634 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amet_2634 PF17147 Amet_2634 Amet_2635 PF13187 4Fe-4S dicluster domain Amet_2636 PF01975 Survival protein SurE Amet_2638 PF00682 HMGL-like Amet_2638 PF02436 Conserved carboxylase domain Amet_2639 PF13673 Acetyltransferase (GNAT) domain Amet_2640 PF00849 RNA pseudouridylate synthase Amet_2640 PF01479 S4 domain Amet_2641 PF01134 Glucose inhibited division protein A Amet_2643 PF00768 D-alanyl-D-alanine carboxypeptidase Amet_2643 PF07943 Penicillin-binding protein 5, C-terminal domain Amet_2645 PF09579 Amet_2645 Amet_2646 PF11167 Amet_2646 Amet_2647 PF07883 Cupin domain Amet_2647 PF12844 Helix-turn-helix domain Amet_2648 PF02675 S-adenosylmethionine decarboxylase Amet_2649 PF01564 Spermine/spermidine synthase Amet_2649 PF17284 Amet_2649 Amet_2650 PF00491 Arginase family Amet_2651 PF01609 Transposase DDE domain Amet_2652 PF00206 Lyase Amet_2652 PF10397 Adenylosuccinate lyase C-terminus Amet_2653 PF00155 Aminotransferase class I and II Amet_2654 PF03551 Transcriptional regulator PadR-like family Amet_2655 PF02811 PHP domain Amet_2656 PF04232 Stage V sporulation protein S (SpoVS) Amet_2657 PF00013 KH domain Amet_2657 PF01966 HD domain Amet_2657 PF12072 Amet_2657 Amet_2658 PF00154 recA bacterial DNA recombination protein Amet_2659 PF01066 CDP-alcohol phosphatidyltransferase Amet_2660 PF00919 Uncharacterized protein family UPF0004 Amet_2660 PF01938 TRAM domain Amet_2660 PF04055 Radical SAM superfamily Amet_2661 PF00581 Rhodanese-like domain Amet_2662 PF01580 FtsK/SpoIIIE family Amet_2662 PF09397 Ftsk gamma domain Amet_2662 PF13491 Amet_2662 Amet_2663 PF00574 Clp protease Amet_2664 PF05239 PRC-barrel domain Amet_2665 PF00675 Insulinase (Peptidase family M16) Amet_2665 PF05193 Peptidase M16 inactive domain Amet_2666 PF01522 Polysaccharide deacetylase Amet_2667 PF00013 KH domain Amet_2667 PF00575 S1 RNA binding domain Amet_2667 PF01138 3' exoribonuclease family, domain 1 Amet_2667 PF03725 3' exoribonuclease family, domain 2 Amet_2667 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Amet_2668 PF00312 Ribosomal protein S15 Amet_2669 PF01687 Riboflavin kinase Amet_2669 PF06574 FAD synthetase Amet_2670 PF01509 TruB family pseudouridylate synthase (N terminal domain) Amet_2670 PF09157 Pseudouridine synthase II TruB, C-terminal Amet_2670 PF16198 Amet_2670 Amet_2671 PF01368 DHH family Amet_2671 PF02272 DHHA1 domain Amet_2672 PF02033 Ribosome-binding factor A Amet_2673 PF00009 Elongation factor Tu GTP binding domain Amet_2673 PF04760 Translation initiation factor IF-2, N-terminal region Amet_2673 PF11987 Translation-initiation factor 2 Amet_2674 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Amet_2675 PF04296 Protein of unknown function (DUF448) Amet_2676 PF00575 S1 RNA binding domain Amet_2676 PF08529 NusA N-terminal domain Amet_2676 PF13184 NusA-like KH domain Amet_2677 PF02576 Uncharacterised BCR, YhbC family COG0779 Amet_2677 PF17384 Amet_2677 Amet_2678 PF00929 Exonuclease Amet_2678 PF02811 PHP domain Amet_2678 PF07733 Bacterial DNA polymerase III alpha subunit Amet_2678 PF11490 Amet_2678 Amet_2678 PF14480 Amet_2678 Amet_2678 PF14579 Helix-hairpin-helix motif Amet_2679 PF00535 Glycosyl transferase family 2 Amet_2680 PF04551 GcpE protein Amet_2681 PF02163 Peptidase family M50 Amet_2681 PF13180 PDZ domain Amet_2682 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Amet_2682 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal Amet_2682 PF13288 DXP reductoisomerase C-terminal domain Amet_2683 PF01148 Cytidylyltransferase family Amet_2684 PF01255 Putative undecaprenyl diphosphate synthase Amet_2686 PF01765 Ribosome recycling factor Amet_2687 PF00696 Amino acid kinase family Amet_2688 PF00889 Elongation factor TS Amet_2689 PF00318 Ribosomal protein S2 Amet_2693 PF03961 Amet_2693 Amet_2693 PF14804 Jag N-terminus Amet_2694 PF04542 Sigma-70 region 2 Amet_2694 PF04545 Sigma-70, region 4 Amet_2695 PF03975 CheD chemotactic sensory transduction Amet_2696 PF04509 CheC-like family Amet_2697 PF01584 CheW-like domain Amet_2698 PF01584 CheW-like domain Amet_2698 PF01627 Hpt domain Amet_2698 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_2698 PF02895 Signal transducing histidine kinase, homodimeric domain Amet_2698 PF07194 P2 response regulator binding domain Amet_2699 PF00072 Response regulator receiver domain Amet_2699 PF01339 CheB methylesterase Amet_2700 PF07238 PilZ domain Amet_2700 PF12945 Flagellar protein YcgR Amet_2701 PF10609 ParA/MinD ATPase like Amet_2702 PF00448 SRP54-type protein, GTPase domain Amet_2703 PF00771 FHIPEP family Amet_2704 PF01312 FlhB HrpN YscU SpaS Family Amet_2705 PF01311 Amet_2705 Amet_2706 PF01313 Amet_2706 Amet_2707 PF00813 Amet_2707 Amet_2708 PF04347 Amet_2708 Amet_2709 PF00072 Response regulator receiver domain Amet_2710 PF01052 Surface presentation of antigens (SPOA) Amet_2710 PF04509 CheC-like family Amet_2711 PF01052 Surface presentation of antigens (SPOA) Amet_2711 PF02154 Flagellar motor switch protein FliM Amet_2712 PF03748 Amet_2712 Amet_2713 PF00691 OmpA family Amet_2713 PF13677 Amet_2713 Amet_2714 PF01618 Amet_2714 Amet_2715 PF06289 Amet_2715 Amet_2716 PF00460 Flagella basal body rod protein Amet_2716 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Amet_2716 PF07559 Flagellar basal body protein FlaE Amet_2717 PF12611 Amet_2717 Amet_2718 PF03963 Amet_2718 Amet_2719 PF02120 Flagellar hook-length control protein FliK Amet_2721 PF02050 Flagellar FliJ protein Amet_2722 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amet_2722 PF02874 ATP synthase alpha/beta family, beta-barrel domain Amet_2723 PF02108 Amet_2723 Amet_2724 PF01706 FliG C-terminal domain Amet_2724 PF14841 FliG middle domain Amet_2724 PF14842 FliG N-terminal domain Amet_2725 PF01514 Secretory protein of YscJ/FliF family Amet_2725 PF08345 Amet_2725 Amet_2726 PF02049 Amet_2726 Amet_2727 PF00460 Flagella basal body rod protein Amet_2727 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Amet_2728 PF00460 Flagella basal body rod protein Amet_2729 PF01590 GAF domain Amet_2729 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_2731 PF05598 Amet_2731 Amet_2732 PF00072 Response regulator receiver domain Amet_2732 PF01584 CheW-like domain Amet_2733 PF00072 Response regulator receiver domain Amet_2733 PF10057 Amet_2733 Amet_2734 PF06018 CodY GAF-like domain Amet_2734 PF08222 CodY helix-turn-helix domain Amet_2735 PF01131 DNA topoisomerase Amet_2735 PF01396 Amet_2735 Amet_2735 PF01751 Toprim domain Amet_2736 PF02481 DNA recombination-mediator protein A Amet_2737 PF01078 Magnesium chelatase, subunit ChlI Amet_2737 PF13335 Amet_2737 Amet_2737 PF13541 Subunit ChlI of Mg-chelatase Amet_2738 PF04055 Radical SAM superfamily Amet_2738 PF12544 Lysine-2,3-aminomutase Amet_2739 PF02021 Uncharacterised protein family UPF0102 Amet_2740 PF01351 Ribonuclease HII Amet_2741 PF01926 50S ribosome-binding GTPase Amet_2742 PF01245 Ribosomal protein L19 Amet_2743 PF01746 tRNA (Guanine-1)-methyltransferase Amet_2744 PF01782 RimM N-terminal domain Amet_2744 PF05239 PRC-barrel domain Amet_2745 PF13083 KH domain Amet_2746 PF00886 Ribosomal protein S16 Amet_2747 PF00448 SRP54-type protein, GTPase domain Amet_2747 PF02881 SRP54-type protein, helical bundle domain Amet_2747 PF02978 Signal peptide binding domain Amet_2748 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Amet_2749 PF00448 SRP54-type protein, GTPase domain Amet_2749 PF02881 SRP54-type protein, helical bundle domain Amet_2750 PF02463 RecF/RecN/SMC N terminal domain Amet_2750 PF06470 SMC proteins Flexible Hinge Domain Amet_2751 PF04055 Radical SAM superfamily Amet_2751 PF16199 Amet_2751 Amet_2752 PF00035 Double-stranded RNA binding motif Amet_2752 PF14622 Ribonuclease-III-like Amet_2753 PF00109 Beta-ketoacyl synthase, N-terminal domain Amet_2753 PF02801 Beta-ketoacyl synthase, C-terminal domain Amet_2754 PF00550 Phosphopantetheine attachment site Amet_2755 PF13561 Enoyl-(Acyl carrier protein) reductase Amet_2756 PF00698 Acyl transferase domain Amet_2757 PF03060 Nitronate monooxygenase Amet_2758 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Amet_2758 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Amet_2759 PF02504 Fatty acid synthesis protein Amet_2760 PF03061 Thioesterase superfamily Amet_2760 PF08220 DeoR-like helix-turn-helix domain Amet_2761 PF01783 Ribosomal L32p protein family Amet_2762 PF02620 Amet_2762 Amet_2763 PF00871 Acetokinase family Amet_2764 PF05636 HIGH Nucleotidyl Transferase Amet_2767 PF01467 Cytidylyltransferase Amet_2768 PF03602 Conserved hypothetical protein 95 Amet_2769 PF00269 Small, acid-soluble spore proteins, alpha/beta type Amet_2770 PF00270 DEAD/DEAH box helicase Amet_2770 PF00271 Helicase conserved C-terminal domain Amet_2770 PF17191 Amet_2770 Amet_2771 PF02734 DAK2 domain Amet_2771 PF13684 Dihydroxyacetone kinase family Amet_2772 PF03780 Amet_2772 Amet_2773 PF00830 Ribosomal L28 family Amet_2775 PF01609 Transposase DDE domain Amet_2776 PF04263 Thiamin pyrophosphokinase, catalytic domain Amet_2776 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain Amet_2777 PF00834 Ribulose-phosphate 3 epimerase family Amet_2778 PF03193 Protein of unknown function, DUF258 Amet_2778 PF16745 Amet_2778 Amet_2779 PF00069 Protein kinase domain Amet_2779 PF03793 PASTA domain Amet_2780 PF13672 Protein phosphatase 2C Amet_2781 PF04055 Radical SAM superfamily Amet_2781 PF13394 4Fe-4S single cluster domain Amet_2782 PF01029 NusB family Amet_2782 PF01189 NOL1/NOP2/sun family Amet_2782 PF17125 Amet_2782 Amet_2783 PF04298 Amet_2783 Amet_2784 PF01976 Amet_2784 Amet_2785 PF00551 Formyl transferase Amet_2785 PF02911 Formyl transferase, C-terminal domain Amet_2786 PF01327 Polypeptide deformylase Amet_2787 PF00271 Helicase conserved C-terminal domain Amet_2787 PF04851 Type III restriction enzyme, res subunit Amet_2788 PF02441 Flavoprotein Amet_2788 PF04127 DNA / pantothenate metabolism flavoprotein Amet_2789 PF01192 RNA polymerase Rpb6 Amet_2790 PF00625 Guanylate kinase Amet_2791 PF04025 Amet_2791 Amet_2792 PF03755 Amet_2792 Amet_2792 PF08340 Amet_2792 Amet_2793 PF01678 Diaminopimelate epimerase Amet_2794 PF05670 Amet_2794 Amet_2794 PF05833 Fibronectin-binding protein A N-terminus (FbpA) Amet_2795 PF00156 Phosphoribosyl transferase domain Amet_2796 PF00849 RNA pseudouridylate synthase Amet_2796 PF01479 S4 domain Amet_2797 PF01252 Amet_2797 Amet_2798 PF01258 Prokaryotic dksA/traR C4-type zinc finger Amet_2799 PF01048 Phosphorylase superfamily Amet_2800 PF05103 DivIVA protein Amet_2801 PF01479 S4 domain Amet_2802 PF02325 Amet_2802 Amet_2803 PF04472 Protein of unknown function (DUF552) Amet_2804 PF01168 Alanine racemase, N-terminal domain Amet_2808 PF00005 ABC transporter Amet_2808 PF00571 CBS domain Amet_2809 PF00528 Binding-protein-dependent transport system inner membrane component Amet_2810 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Amet_2812 PF02653 Amet_2812 Amet_2813 PF00005 ABC transporter Amet_2814 PF13407 Periplasmic binding protein domain Amet_2815 PF13407 Periplasmic binding protein domain Amet_2816 PF00072 Response regulator receiver domain Amet_2816 PF12833 Helix-turn-helix domain Amet_2817 PF00672 HAMP domain Amet_2817 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_2817 PF06580 Amet_2817 Amet_2818 PF13407 Periplasmic binding protein domain Amet_2819 PF00515 Tetratricopeptide repeat Amet_2819 PF13181 Tetratricopeptide repeat Amet_2820 PF03009 Glycerophosphoryl diester phosphodiesterase family Amet_2821 PF02675 S-adenosylmethionine decarboxylase Amet_2822 PF00004 ATPase family associated with various cellular activities (AAA) Amet_2822 PF07724 AAA domain (Cdc48 subfamily) Amet_2822 PF10431 C-terminal, D2-small domain, of ClpB protein Amet_2823 PF04536 TLP18 Amet_2824 PF04011 LemA family Amet_2825 PF01476 LysM domain Amet_2826 PF14512 Putative TM nitroreductase Amet_2828 PF07690 Major Facilitator Superfamily Amet_2835 PF09851 Amet_2835 Amet_2836 PF05133 Phage portal protein, SPP1 Gp6-like Amet_2837 PF17289 Amet_2837 Amet_2845 PF01695 IstB-like ATP binding protein Amet_2846 PF00665 Integrase core domain Amet_2851 PF13443 Cro/C1-type HTH DNA-binding domain Amet_2853 PF00589 Phage integrase family Amet_2854 PF09547 Amet_2854 Amet_2855 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Amet_2855 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Amet_2856 PF02660 Amet_2856 Amet_2857 PF01926 50S ribosome-binding GTPase Amet_2857 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Amet_2858 PF04459 Amet_2858 Amet_2859 PF11385 Amet_2859 Amet_2860 PF11385 Amet_2860 Amet_2862 PF14045 Amet_2862 Amet_2863 PF07454 Amet_2863 Amet_2864 PF07758 Amet_2864 Amet_2865 PF00512 His Kinase A (phospho-acceptor) domain Amet_2865 PF00672 HAMP domain Amet_2865 PF00989 PAS fold Amet_2865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_2865 PF16736 Amet_2865 Amet_2866 PF00072 Response regulator receiver domain Amet_2866 PF00486 Transcriptional regulatory protein, C terminal Amet_2867 PF02578 Multi-copper polyphenol oxidoreductase laccase Amet_2868 PF03477 ATP cone domain Amet_2869 PF05239 PRC-barrel domain Amet_2870 PF04539 Sigma-70 region 3 Amet_2870 PF04542 Sigma-70 region 2 Amet_2870 PF04545 Sigma-70, region 4 Amet_2871 PF04542 Sigma-70 region 2 Amet_2871 PF04545 Sigma-70, region 4 Amet_2872 PF03419 Amet_2872 Amet_2873 PF00091 Tubulin/FtsZ family, GTPase domain Amet_2873 PF12327 FtsZ family, C-terminal domain Amet_2874 PF06947 Amet_2874 Amet_2875 PF05949 Bacterial protein of unknown function (DUF881) Amet_2876 PF05949 Bacterial protein of unknown function (DUF881) Amet_2877 PF03799 Cell division protein FtsQ Amet_2877 PF08478 POTRA domain, FtsQ-type Amet_2878 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Amet_2879 PF03033 Glycosyltransferase family 28 N-terminal domain Amet_2879 PF04101 Glycosyltransferase family 28 C-terminal domain Amet_2880 PF01098 Amet_2880 Amet_2881 PF02875 Mur ligase family, glutamate ligase domain Amet_2881 PF08245 Mur ligase middle domain Amet_2882 PF00953 Glycosyl transferase family 4 Amet_2883 PF01225 Mur ligase family, catalytic domain Amet_2883 PF02875 Mur ligase family, glutamate ligase domain Amet_2883 PF08245 Mur ligase middle domain Amet_2884 PF01225 Mur ligase family, catalytic domain Amet_2884 PF02875 Mur ligase family, glutamate ligase domain Amet_2884 PF08245 Mur ligase middle domain Amet_2885 PF00905 Penicillin binding protein transpeptidase domain Amet_2885 PF03717 Penicillin-binding Protein dimerisation domain Amet_2885 PF03793 PASTA domain Amet_2887 PF01795 MraW methylase family Amet_2888 PF02381 MraZ protein Amet_2889 PF09388 Spo0E like sporulation regulatory protein Amet_2890 PF01790 Amet_2890 Amet_2891 PF00675 Insulinase (Peptidase family M16) Amet_2891 PF05193 Peptidase M16 inactive domain Amet_2892 PF05193 Peptidase M16 inactive domain Amet_2894 PF09580 Amet_2894 Amet_2896 PF01926 50S ribosome-binding GTPase Amet_2896 PF06071 Protein of unknown function (DUF933) Amet_2897 PF01791 DeoC/LacD family aldolase Amet_2898 PF06130 Amet_2898 Amet_2899 PF07228 Stage II sporulation protein E (SpoIIE) Amet_2899 PF13185 GAF domain Amet_2900 PF04471 Restriction endonuclease Amet_2901 PF03698 Amet_2901 Amet_2903 PF00156 Phosphoribosyl transferase domain Amet_2904 PF01923 Cobalamin adenosyltransferase Amet_2905 PF00005 ABC transporter Amet_2905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_2906 PF00005 ABC transporter Amet_2906 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_2907 PF00528 Binding-protein-dependent transport system inner membrane component Amet_2907 PF12911 Amet_2907 Amet_2908 PF00528 Binding-protein-dependent transport system inner membrane component Amet_2909 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amet_2911 PF00005 ABC transporter Amet_2911 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_2912 PF00005 ABC transporter Amet_2912 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_2913 PF00528 Binding-protein-dependent transport system inner membrane component Amet_2913 PF12911 Amet_2913 Amet_2914 PF00528 Binding-protein-dependent transport system inner membrane component Amet_2915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amet_2916 PF00293 NUDIX domain Amet_2918 PF01578 Amet_2918 Amet_2919 PF05140 Amet_2919 Amet_2920 PF02335 Cytochrome c552 Amet_2921 PF01593 Flavin containing amine oxidoreductase Amet_2922 PF03069 Acetamidase/Formamidase family Amet_2923 PF13687 Amet_2923 Amet_2925 PF00563 EAL domain Amet_2925 PF00990 GGDEF domain Amet_2925 PF13426 PAS domain Amet_2926 PF00563 EAL domain Amet_2926 PF00990 GGDEF domain Amet_2926 PF17203 Amet_2926 Amet_2927 PF04542 Sigma-70 region 2 Amet_2927 PF08281 Sigma-70, region 4 Amet_2929 PF11167 Amet_2929 Amet_2930 PF09579 Amet_2930 Amet_2931 PF07739 TipAS antibiotic-recognition domain Amet_2931 PF13411 MerR HTH family regulatory protein Amet_2932 PF12849 PBP superfamily domain Amet_2933 PF00293 NUDIX domain Amet_2934 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_2934 PF02743 Cache domain Amet_2935 PF03572 Peptidase family S41 Amet_2937 PF05145 Amet_2937 Amet_2938 PF00753 Metallo-beta-lactamase superfamily Amet_2940 PF13419 Haloacid dehalogenase-like hydrolase Amet_2941 PF01546 Peptidase family M20/M25/M40 Amet_2941 PF07687 Peptidase dimerisation domain Amet_2943 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_2943 PF02743 Cache domain Amet_2944 PF00128 Alpha amylase, catalytic domain Amet_2945 PF00343 Carbohydrate phosphorylase Amet_2946 PF00534 Glycosyl transferases group 1 Amet_2946 PF08323 Starch synthase catalytic domain Amet_2947 PF00483 Nucleotidyl transferase Amet_2948 PF00483 Nucleotidyl transferase Amet_2949 PF00128 Alpha amylase, catalytic domain Amet_2949 PF02806 Alpha amylase, C-terminal all-beta domain Amet_2949 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Amet_2950 PF00583 Acetyltransferase (GNAT) family Amet_2951 PF03734 L,D-transpeptidase catalytic domain Amet_2952 PF00270 DEAD/DEAH box helicase Amet_2952 PF00271 Helicase conserved C-terminal domain Amet_2953 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amet_2953 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amet_2954 PF07478 D-ala D-ala ligase C-terminus Amet_2956 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Amet_2956 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Amet_2957 PF01051 Initiator Replication protein Amet_2958 PF00583 Acetyltransferase (GNAT) family Amet_2958 PF08218 Citrate lyase ligase C-terminal domain Amet_2959 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Amet_2959 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Amet_2960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_2961 PF03547 Amet_2961 Amet_2962 PF00694 Aconitase C-terminal domain Amet_2963 PF00330 Aconitase family (aconitate hydratase) Amet_2964 PF03390 Amet_2964 Amet_2965 PF00390 Malic enzyme, N-terminal domain Amet_2965 PF03949 Malic enzyme, NAD binding domain Amet_2966 PF00072 Response regulator receiver domain Amet_2966 PF08279 HTH domain Amet_2967 PF00989 PAS fold Amet_2967 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_2967 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Amet_2967 PF17203 Amet_2967 Amet_2968 PF07722 Peptidase C26 Amet_2969 PF00563 EAL domain Amet_2969 PF08668 HDOD domain Amet_2973 PF02626 Allophanate hydrolase subunit 2 Amet_2974 PF02682 Allophanate hydrolase subunit 1 Amet_2975 PF07286 Protein of unknown function (DUF1445) Amet_2976 PF01566 Amet_2976 Amet_2977 PF03746 LamB/YcsF family Amet_2978 PF00072 Response regulator receiver domain Amet_2978 PF00158 Sigma-54 interaction domain Amet_2978 PF02954 Bacterial regulatory protein, Fis family Amet_2979 PF00512 His Kinase A (phospho-acceptor) domain Amet_2979 PF00672 HAMP domain Amet_2979 PF00989 PAS fold Amet_2979 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_2980 PF00474 Sodium:solute symporter family Amet_2982 PF09972 Amet_2982 Amet_2984 PF09848 Uncharacterized conserved protein (DUF2075) Amet_2989 PF13456 Reverse transcriptase-like Amet_2990 PF01784 NIF3 (NGG1p interacting factor 3) Amet_2991 PF12847 Methyltransferase domain Amet_2993 PF00140 Sigma-70 factor, region 1 Amet_2993 PF03979 Sigma-70 factor, region 1 Amet_2993 PF04539 Sigma-70 region 3 Amet_2993 PF04542 Sigma-70 region 2 Amet_2993 PF04545 Sigma-70, region 4 Amet_2994 PF01807 CHC2 zinc finger Amet_2994 PF08275 DNA primase catalytic core, N-terminal domain Amet_2994 PF10410 DnaB-helicase binding domain of primase Amet_2994 PF13155 Toprim-like Amet_2995 PF02639 Amet_2995 Amet_2996 PF01966 HD domain Amet_2996 PF13286 Phosphohydrolase-associated domain Amet_2997 PF05437 Amet_2997 Amet_2998 PF03591 Amet_2998 Amet_2999 PF00155 Aminotransferase class I and II Amet_2999 PF00392 Bacterial regulatory proteins, gntR family Amet_3000 PF00890 FAD binding domain Amet_3000 PF04205 FMN-binding domain Amet_3001 PF00072 Response regulator receiver domain Amet_3001 PF00486 Transcriptional regulatory protein, C terminal Amet_3002 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3003 PF01212 Beta-eliminating lyase Amet_3008 PF00440 Bacterial regulatory proteins, tetR family Amet_3009 PF00890 FAD binding domain Amet_3009 PF04205 FMN-binding domain Amet_3010 PF01609 Transposase DDE domain Amet_3013 PF00163 Ribosomal protein S4/S9 N-terminal domain Amet_3013 PF01479 S4 domain Amet_3014 PF00258 Flavodoxin Amet_3015 PF02583 Metal-sensitive transcriptional repressor Amet_3016 PF01554 MatE Amet_3018 PF03551 Transcriptional regulator PadR-like family Amet_3019 PF00391 PEP-utilising enzyme, mobile domain Amet_3019 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Amet_3019 PF02896 PEP-utilising enzyme, TIM barrel domain Amet_3020 PF03618 Amet_3020 Amet_3021 PF00571 CBS domain Amet_3021 PF08279 HTH domain Amet_3022 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amet_3022 PF03129 Anticodon binding domain Amet_3023 PF14242 Amet_3023 Amet_3024 PF02565 Recombination protein O C terminal Amet_3024 PF11967 Recombination protein O N terminal Amet_3026 PF01926 50S ribosome-binding GTPase Amet_3026 PF07650 KH domain Amet_3027 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Amet_3028 PF11258 Protein of unknown function (DUF3048) Amet_3028 PF17479 Amet_3028 Amet_3029 PF04367 Amet_3029 Amet_3030 PF01219 Prokaryotic diacylglycerol kinase Amet_3030 PF01569 PAP2 superfamily Amet_3031 PF02130 Uncharacterized protein family UPF0054 Amet_3032 PF01966 HD domain Amet_3032 PF07697 Amet_3032 Amet_3032 PF07698 Amet_3032 Amet_3033 PF02562 PhoH-like protein Amet_3034 PF06898 Amet_3034 Amet_3035 PF07873 YabP family Amet_3037 PF12127 Amet_3037 Amet_3038 PF01957 NfeD-like C-terminal, partner-binding Amet_3039 PF03372 Endonuclease/Exonuclease/phosphatase family Amet_3040 PF01609 Transposase DDE domain Amet_3041 PF09424 Yqey-like protein Amet_3042 PF01165 Ribosomal protein S21 Amet_3043 PF01230 HIT domain Amet_3044 PF00919 Uncharacterized protein family UPF0004 Amet_3044 PF04055 Radical SAM superfamily Amet_3045 PF04452 RNA methyltransferase Amet_3046 PF06325 Ribosomal protein L11 methyltransferase (PrmA) Amet_3047 PF00226 DnaJ domain Amet_3047 PF00684 DnaJ central domain Amet_3047 PF01556 DnaJ C terminal domain Amet_3048 PF00012 Hsp70 protein Amet_3049 PF01025 GrpE Amet_3050 PF01628 HrcA protein C terminal domain Amet_3051 PF04055 Radical SAM superfamily Amet_3051 PF06969 HemN C-terminal domain Amet_3052 PF00009 Elongation factor Tu GTP binding domain Amet_3052 PF00679 Elongation factor G C-terminus Amet_3052 PF03144 Elongation factor Tu domain 2 Amet_3052 PF06421 GTP-binding protein LepA C-terminus Amet_3054 PF07454 Amet_3054 Amet_3055 PF03418 Germination protease Amet_3056 PF01649 Ribosomal protein S20 Amet_3057 PF06144 DNA polymerase III, delta subunit Amet_3058 PF03772 Amet_3058 Amet_3060 PF12706 Beta-lactamase superfamily domain Amet_3061 PF13181 Tetratricopeptide repeat Amet_3061 PF13424 Tetratricopeptide repeat Amet_3062 PF00753 Metallo-beta-lactamase superfamily Amet_3064 PF02384 N-6 DNA Methylase Amet_3064 PF12950 TaqI-like C-terminal specificity domain Amet_3069 PF01061 Amet_3069 Amet_3070 PF00005 ABC transporter Amet_3071 PF07969 Amidohydrolase family Amet_3072 PF04608 Phosphatidylglycerophosphatase A Amet_3073 PF00270 DEAD/DEAH box helicase Amet_3073 PF00271 Helicase conserved C-terminal domain Amet_3073 PF03880 DbpA RNA binding domain Amet_3074 PF05504 Spore germination B3/ GerAC like, C-terminal Amet_3075 PF03323 Amet_3075 Amet_3076 PF03845 Amet_3076 Amet_3077 PF01244 Membrane dipeptidase (Peptidase family M19) Amet_3078 PF02687 Amet_3078 Amet_3078 PF12704 MacB-like periplasmic core domain Amet_3079 PF00005 ABC transporter Amet_3080 PF16576 Amet_3080 Amet_3081 PF02308 Amet_3081 Amet_3082 PF01970 Amet_3082 Amet_3083 PF07331 Amet_3083 Amet_3084 PF03401 Tripartite tricarboxylate transporter family receptor Amet_3085 PF03401 Tripartite tricarboxylate transporter family receptor Amet_3086 PF00512 His Kinase A (phospho-acceptor) domain Amet_3086 PF00672 HAMP domain Amet_3086 PF00989 PAS fold Amet_3086 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3086 PF16736 Amet_3086 Amet_3087 PF00072 Response regulator receiver domain Amet_3087 PF00486 Transcriptional regulatory protein, C terminal Amet_3088 PF10719 Amet_3088 Amet_3089 PF00766 Electron transfer flavoprotein FAD-binding domain Amet_3089 PF01012 Electron transfer flavoprotein domain Amet_3090 PF01012 Electron transfer flavoprotein domain Amet_3091 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Amet_3091 PF02770 Acyl-CoA dehydrogenase, middle domain Amet_3091 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Amet_3092 PF01575 MaoC like domain Amet_3094 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Amet_3095 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Amet_3095 PF10531 SLBB domain Amet_3095 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Amet_3095 PF14697 4Fe-4S dicluster domain Amet_3096 PF00037 4Fe-4S binding domain Amet_3096 PF00384 Molybdopterin oxidoreductase Amet_3096 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Amet_3096 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amet_3096 PF13510 2Fe-2S iron-sulfur cluster binding domain Amet_3096 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Amet_3099 PF02229 Transcriptional Coactivator p15 (PC4) Amet_3101 PF13641 Glycosyltransferase like family 2 Amet_3102 PF01966 HD domain Amet_3103 PF01145 SPFH domain / Band 7 family Amet_3104 PF01145 SPFH domain / Band 7 family Amet_3106 PF00521 DNA gyrase/topoisomerase IV, subunit A Amet_3106 PF03989 DNA gyrase C-terminal domain, beta-propeller Amet_3107 PF00204 DNA gyrase B Amet_3107 PF00986 DNA gyrase B subunit, carboxyl terminus Amet_3107 PF01751 Toprim domain Amet_3108 PF02627 Carboxymuconolactone decarboxylase family Amet_3109 PF01042 Endoribonuclease L-PSP Amet_3111 PF04657 Amet_3111 Amet_3112 PF01243 Pyridoxamine 5'-phosphate oxidase Amet_3113 PF01471 Putative peptidoglycan binding domain Amet_3113 PF03734 L,D-transpeptidase catalytic domain Amet_3114 PF00133 tRNA synthetases class I (I, L, M and V) Amet_3114 PF08264 Anticodon-binding domain of tRNA Amet_3115 PF03009 Glycerophosphoryl diester phosphodiesterase family Amet_3115 PF10110 Amet_3115 Amet_3116 PF00464 Serine hydroxymethyltransferase Amet_3117 PF07521 RNA-metabolising metallo-beta-lactamase Amet_3117 PF12706 Beta-lactamase superfamily domain Amet_3118 PF14903 Amet_3118 Amet_3122 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amet_3123 PF01464 Transglycosylase SLT domain Amet_3124 PF01121 Dephospho-CoA kinase Amet_3125 PF00476 DNA polymerase family A Amet_3125 PF01367 5'-3' exonuclease, C-terminal SAM fold Amet_3125 PF01612 3'-5' exonuclease Amet_3125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Amet_3126 PF13490 Putative zinc-finger Amet_3126 PF14257 Amet_3126 Amet_3127 PF04542 Sigma-70 region 2 Amet_3127 PF08281 Sigma-70, region 4 Amet_3128 PF04307 Amet_3128 Amet_3130 PF01609 Transposase DDE domain Amet_3133 PF01381 Helix-turn-helix Amet_3137 PF01545 Cation efflux family Amet_3137 PF16916 Amet_3137 Amet_3138 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Amet_3138 PF03466 LysR substrate binding domain Amet_3139 PF02645 Uncharacterised protein, DegV family COG1307 Amet_3140 PF02127 Aminopeptidase I zinc metalloprotease (M18) Amet_3141 PF00072 Response regulator receiver domain Amet_3141 PF00196 Bacterial regulatory proteins, luxR family Amet_3142 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3142 PF05384 Amet_3142 Amet_3142 PF07730 Histidine kinase Amet_3144 PF01584 CheW-like domain Amet_3145 PF05979 Bacterial protein of unknown function (DUF896) Amet_3148 PF01979 Amidohydrolase family Amet_3149 PF00221 Aromatic amino acid lyase Amet_3150 PF03698 Amet_3150 Amet_3151 PF01047 MarR family Amet_3152 PF01551 Peptidase family M23 Amet_3153 PF04519 Amet_3153 Amet_3154 PF00781 Diacylglycerol kinase catalytic domain Amet_3155 PF00155 Aminotransferase class I and II Amet_3155 PF00392 Bacterial regulatory proteins, gntR family Amet_3157 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Amet_3157 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Amet_3158 PF12837 4Fe-4S binding domain Amet_3159 PF00005 ABC transporter Amet_3159 PF00664 ABC transporter transmembrane region Amet_3160 PF00005 ABC transporter Amet_3160 PF00664 ABC transporter transmembrane region Amet_3161 PF02274 Amidinotransferase Amet_3162 PF02811 PHP domain Amet_3164 PF00990 GGDEF domain Amet_3165 PF01943 Amet_3165 Amet_3165 PF14667 Polysaccharide biosynthesis C-terminal domain Amet_3166 PF02811 PHP domain Amet_3166 PF14520 Helix-hairpin-helix domain Amet_3166 PF14716 Helix-hairpin-helix domain Amet_3166 PF14791 DNA polymerase beta thumb Amet_3167 PF03473 MOSC domain Amet_3168 PF00994 Probable molybdopterin binding domain Amet_3168 PF03453 MoeA N-terminal region (domain I and II) Amet_3168 PF03454 MoeA C-terminal region (domain IV) Amet_3168 PF12727 PBP superfamily domain Amet_3169 PF00994 Probable molybdopterin binding domain Amet_3169 PF03453 MoeA N-terminal region (domain I and II) Amet_3169 PF03454 MoeA C-terminal region (domain IV) Amet_3170 PF00004 ATPase family associated with various cellular activities (AAA) Amet_3170 PF01434 Peptidase family M41 Amet_3171 PF04245 Amet_3171 Amet_3173 PF00849 RNA pseudouridylate synthase Amet_3174 PF01513 ATP-NAD kinase Amet_3175 PF00375 Sodium:dicarboxylate symporter family Amet_3176 PF00072 Response regulator receiver domain Amet_3176 PF08664 Amet_3176 Amet_3178 PF05598 Amet_3178 Amet_3182 PF00375 Sodium:dicarboxylate symporter family Amet_3183 PF02906 Iron only hydrogenase large subunit, C-terminal domain Amet_3183 PF04060 Putative Fe-S cluster Amet_3183 PF13237 4Fe-4S dicluster domain Amet_3184 PF00543 Nitrogen regulatory protein P-II Amet_3185 PF07556 Amet_3185 Amet_3186 PF03116 Amet_3186 Amet_3187 PF04205 FMN-binding domain Amet_3188 PF02508 Amet_3188 Amet_3189 PF02508 Amet_3189 Amet_3190 PF00111 2Fe-2S iron-sulfur cluster binding domain Amet_3190 PF00175 Oxidoreductase NAD-binding domain Amet_3190 PF00970 Oxidoreductase FAD-binding domain Amet_3193 PF00202 Aminotransferase class-III Amet_3194 PF00696 Amino acid kinase family Amet_3194 PF13840 ACT domain Amet_3195 PF00132 Bacterial transferase hexapeptide (six repeats) Amet_3195 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal Amet_3195 PF14602 Hexapeptide repeat of succinyl-transferase Amet_3196 PF01113 Dihydrodipicolinate reductase, N-terminus Amet_3196 PF05173 Dihydrodipicolinate reductase, C-terminus Amet_3197 PF00701 Dihydrodipicolinate synthetase family Amet_3198 PF01118 Semialdehyde dehydrogenase, NAD binding domain Amet_3198 PF02774 Semialdehyde dehydrogenase, dimerisation domain Amet_3199 PF01476 LysM domain Amet_3199 PF07486 Cell Wall Hydrolase Amet_3200 PF00795 Carbon-nitrogen hydrolase Amet_3201 PF03845 Amet_3201 Amet_3202 PF03323 Amet_3202 Amet_3203 PF05504 Spore germination B3/ GerAC like, C-terminal Amet_3205 PF03099 Biotin/lipoate A/B protein ligase family Amet_3205 PF10437 Bacterial lipoate protein ligase C-terminus Amet_3206 PF01070 FMN-dependent dehydrogenase Amet_3208 PF00512 His Kinase A (phospho-acceptor) domain Amet_3208 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3209 PF00072 Response regulator receiver domain Amet_3209 PF00486 Transcriptional regulatory protein, C terminal Amet_3210 PF01869 BadF/BadG/BcrA/BcrD ATPase family Amet_3211 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Amet_3212 PF03323 Amet_3212 Amet_3213 PF03600 Citrate transporter Amet_3214 PF00330 Aconitase family (aconitate hydratase) Amet_3214 PF00694 Aconitase C-terminal domain Amet_3215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Amet_3215 PF03466 LysR substrate binding domain Amet_3216 PF03977 Amet_3216 Amet_3217 PF00364 Biotin-requiring enzyme Amet_3218 PF04277 Amet_3218 Amet_3219 PF01039 Carboxyl transferase domain Amet_3220 PF00682 HMGL-like Amet_3220 PF02436 Conserved carboxylase domain Amet_3221 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_3222 PF03802 Amet_3222 Amet_3223 PF04223 Citrate lyase, alpha subunit (CitF) Amet_3224 PF03328 HpcH/HpaI aldolase/citrate lyase family Amet_3225 PF06857 Amet_3225 Amet_3226 PF03390 Amet_3226 Amet_3227 PF00072 Response regulator receiver domain Amet_3227 PF10057 Amet_3227 Amet_3228 PF00512 His Kinase A (phospho-acceptor) domain Amet_3228 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3229 PF00390 Malic enzyme, N-terminal domain Amet_3229 PF03949 Malic enzyme, NAD binding domain Amet_3230 PF04198 Putative sugar-binding domain Amet_3232 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3232 PF07730 Histidine kinase Amet_3235 PF00581 Rhodanese-like domain Amet_3236 PF03773 Amet_3236 Amet_3238 PF12801 Amet_3238 Amet_3238 PF13187 4Fe-4S dicluster domain Amet_3240 PF02632 BioY family Amet_3241 PF04055 Radical SAM superfamily Amet_3241 PF06968 Biotin and Thiamin Synthesis associated domain Amet_3242 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_3245 PF00350 Dynamin family Amet_3246 PF00571 CBS domain Amet_3246 PF01769 Divalent cation transporter Amet_3246 PF03448 MgtE intracellular N domain Amet_3249 PF00563 EAL domain Amet_3249 PF00990 GGDEF domain Amet_3249 PF07238 PilZ domain Amet_3249 PF08447 PAS fold Amet_3249 PF13426 PAS domain Amet_3251 PF04246 Amet_3251 Amet_3253 PF07907 Amet_3253 Amet_3254 PF01790 Amet_3254 Amet_3255 PF00072 Response regulator receiver domain Amet_3255 PF00158 Sigma-54 interaction domain Amet_3255 PF02954 Bacterial regulatory protein, Fis family Amet_3256 PF00512 His Kinase A (phospho-acceptor) domain Amet_3256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3257 PF12773 Amet_3257 Amet_3258 PF00512 His Kinase A (phospho-acceptor) domain Amet_3258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3259 PF00072 Response regulator receiver domain Amet_3259 PF00486 Transcriptional regulatory protein, C terminal Amet_3261 PF04191 Phospholipid methyltransferase Amet_3262 PF00395 S-layer homology domain Amet_3262 PF00877 NlpC/P60 family Amet_3263 PF09388 Spo0E like sporulation regulatory protein Amet_3268 PF09335 Amet_3268 Amet_3269 PF09851 Amet_3269 Amet_3271 PF00403 Heavy-metal-associated domain Amet_3272 PF00122 E1-E2 ATPase Amet_3272 PF00403 Heavy-metal-associated domain Amet_3272 PF00702 haloacid dehalogenase-like hydrolase Amet_3274 PF07314 Amet_3274 Amet_3275 PF02239 Cytochrome D1 heme domain Amet_3277 PF11666 Amet_3277 Amet_3279 PF08241 Methyltransferase domain Amet_3280 PF02310 B12 binding domain Amet_3280 PF04055 Radical SAM superfamily Amet_3280 PF13282 Amet_3280 Amet_3282 PF05067 Manganese containing catalase Amet_3284 PF11535 Calcium binding Amet_3286 PF01966 HD domain Amet_3290 PF00581 Rhodanese-like domain Amet_3291 PF00581 Rhodanese-like domain Amet_3292 PF00005 ABC transporter Amet_3292 PF08402 TOBE domain Amet_3293 PF00528 Binding-protein-dependent transport system inner membrane component Amet_3294 PF00528 Binding-protein-dependent transport system inner membrane component Amet_3295 PF13416 Bacterial extracellular solute-binding protein Amet_3296 PF01066 CDP-alcohol phosphatidyltransferase Amet_3297 PF09335 Amet_3297 Amet_3298 PF02754 Amet_3298 Amet_3298 PF13534 4Fe-4S dicluster domain Amet_3299 PF00581 Rhodanese-like domain Amet_3300 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Amet_3301 PF13310 Amet_3301 Amet_3305 PF02254 TrkA-N domain Amet_3307 PF00072 Response regulator receiver domain Amet_3307 PF00486 Transcriptional regulatory protein, C terminal Amet_3308 PF00512 His Kinase A (phospho-acceptor) domain Amet_3308 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3308 PF13493 Domain of unknown function (DUF4118) Amet_3309 PF02080 TrkA-C domain Amet_3309 PF02254 TrkA-N domain Amet_3310 PF02386 Cation transport protein Amet_3313 PF03553 Amet_3313 Amet_3313 PF13726 Amet_3313 Amet_3314 PF04024 Amet_3314 Amet_3316 PF04854 Amet_3316 Amet_3317 PF04616 Glycosyl hydrolases family 43 Amet_3318 PF00528 Binding-protein-dependent transport system inner membrane component Amet_3319 PF00528 Binding-protein-dependent transport system inner membrane component Amet_3320 PF01547 Bacterial extracellular solute-binding protein Amet_3321 PF00072 Response regulator receiver domain Amet_3321 PF12833 Helix-turn-helix domain Amet_3322 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3322 PF06580 Amet_3322 Amet_3323 PF00005 ABC transporter Amet_3323 PF08402 TOBE domain Amet_3324 PF13556 PucR C-terminal helix-turn-helix domain Amet_3325 PF02557 D-alanyl-D-alanine carboxypeptidase Amet_3326 PF00156 Phosphoribosyl transferase domain Amet_3327 PF00005 ABC transporter Amet_3327 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_3328 PF00005 ABC transporter Amet_3328 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amet_3329 PF00528 Binding-protein-dependent transport system inner membrane component Amet_3329 PF12911 Amet_3329 Amet_3330 PF00528 Binding-protein-dependent transport system inner membrane component Amet_3331 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amet_3332 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amet_3333 PF00037 4Fe-4S binding domain Amet_3333 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amet_3333 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amet_3334 PF01063 Aminotransferase class IV Amet_3335 PF01171 PP-loop family Amet_3336 PF00005 ABC transporter Amet_3336 PF12848 ABC transporter Amet_3338 PF00557 Metallopeptidase family M24 Amet_3338 PF01321 Creatinase/Prolidase N-terminal domain Amet_3340 PF07875 Amet_3340 Amet_3343 PF14045 Amet_3343 Amet_3344 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Amet_3344 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Amet_3345 PF00941 FAD binding domain in molybdopterin dehydrogenase Amet_3346 PF00111 2Fe-2S iron-sulfur cluster binding domain Amet_3346 PF01799 [2Fe-2S] binding domain Amet_3348 PF01131 DNA topoisomerase Amet_3348 PF01751 Toprim domain Amet_3349 PF02517 CAAX protease self-immunity Amet_3350 PF00270 DEAD/DEAH box helicase Amet_3350 PF00271 Helicase conserved C-terminal domain Amet_3351 PF02517 CAAX protease self-immunity Amet_3356 PF07927 YcfA-like protein Amet_3357 PF04439 Streptomycin adenylyltransferase Amet_3359 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Amet_3359 PF08388 Amet_3359 Amet_3360 PF00239 Resolvase, N terminal domain Amet_3360 PF07508 Recombinase Amet_3360 PF13408 Recombinase zinc beta ribbon domain Amet_3361 PF13655 Amet_3361 Amet_3362 PF11535 Calcium binding Amet_3363 PF04986 Amet_3363 Amet_3363 PF14319 Amet_3363 Amet_3364 PF04014 Antidote-toxin recognition MazE Amet_3365 PF02661 Fic/DOC family Amet_3366 PF13302 Acetyltransferase (GNAT) domain Amet_3367 PF13527 Acetyltransferase (GNAT) domain Amet_3369 PF05973 Amet_3369 Amet_3370 PF01381 Helix-turn-helix Amet_3371 PF00005 ABC transporter Amet_3371 PF12848 ABC transporter Amet_3372 PF00005 ABC transporter Amet_3372 PF12848 ABC transporter Amet_3372 PF16326 Amet_3372 Amet_3373 PF00809 Pterin binding enzyme Amet_3373 PF02310 B12 binding domain Amet_3373 PF02574 Homocysteine S-methyltransferase Amet_3373 PF02607 B12 binding domain Amet_3374 PF02965 Vitamin B12 dependent methionine synthase, activation domain Amet_3375 PF02219 Methylenetetrahydrofolate reductase Amet_3376 PF01053 Cys/Met metabolism PLP-dependent enzyme Amet_3377 PF00188 Cysteine-rich secretory protein family Amet_3378 PF02142 MGS-like domain Amet_3378 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Amet_3378 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Amet_3379 PF00117 Glutamine amidotransferase class-I Amet_3379 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Amet_3380 PF00202 Aminotransferase class-III Amet_3381 PF00696 Amino acid kinase family Amet_3382 PF01960 ArgJ family Amet_3383 PF01118 Semialdehyde dehydrogenase, NAD binding domain Amet_3383 PF02774 Semialdehyde dehydrogenase, dimerisation domain Amet_3384 PF01641 SelR domain Amet_3385 PF00072 Response regulator receiver domain Amet_3385 PF03861 ANTAR domain Amet_3386 PF00120 Glutamine synthetase, catalytic domain Amet_3386 PF03951 Glutamine synthetase, beta-Grasp domain Amet_3387 PF02637 GatB domain Amet_3387 PF02934 GatB/GatE catalytic domain Amet_3388 PF01425 Amidase Amet_3389 PF02686 Glu-tRNAGln amidotransferase C subunit Amet_3390 PF00152 tRNA synthetases class II (D, K and N) Amet_3390 PF01336 OB-fold nucleic acid binding domain Amet_3391 PF00543 Nitrogen regulatory protein P-II Amet_3392 PF00909 Ammonium Transporter Family Amet_3393 PF01411 tRNA synthetases class II (A) Amet_3393 PF02272 DHHA1 domain Amet_3393 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Amet_3394 PF01385 Amet_3394 Amet_3394 PF07282 Amet_3394 Amet_3394 PF12323 Amet_3394 Amet_3395 PF01797 Transposase IS200 like Amet_3396 PF03547 Amet_3396 Amet_3397 PF00310 Glutamine amidotransferases class-II Amet_3397 PF01493 GXGXG motif Amet_3397 PF01645 Conserved region in glutamate synthase Amet_3397 PF04898 Glutamate synthase central domain Amet_3398 PF13740 ACT domain Amet_3399 PF05167 Uncharacterised ACR (DUF711) Amet_3400 PF00205 Thiamine pyrophosphate enzyme, central domain Amet_3400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amet_3400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Amet_3401 PF00920 Dehydratase family Amet_3402 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Amet_3402 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain Amet_3403 PF10369 Small subunit of acetolactate synthase Amet_3403 PF13710 ACT domain Amet_3404 PF00291 Pyridoxal-phosphate dependent enzyme Amet_3405 PF01391 Collagen triple helix repeat (20 copies) Amet_3406 PF00535 Glycosyl transferase family 2 Amet_3407 PF00696 Amino acid kinase family Amet_3407 PF01842 ACT domain Amet_3408 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase Amet_3409 PF04223 Citrate lyase, alpha subunit (CitF) Amet_3410 PF03328 HpcH/HpaI aldolase/citrate lyase family Amet_3411 PF06857 Amet_3411 Amet_3412 PF05683 Fumarase C-terminus Amet_3413 PF05681 Amet_3413 Amet_3414 PF05034 Methylaspartate ammonia-lyase N-terminus Amet_3414 PF07476 Methylaspartate ammonia-lyase C-terminus Amet_3415 PF06368 Methylaspartate mutase E chain (MutE) Amet_3416 PF02310 B12 binding domain Amet_3417 PF00392 Bacterial regulatory proteins, gntR family Amet_3418 PF00205 Thiamine pyrophosphate enzyme, central domain Amet_3418 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amet_3418 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Amet_3419 PF13710 ACT domain Amet_3420 PF08903 Domain of unknown function (DUF1846) Amet_3422 PF02655 ATP-grasp domain Amet_3423 PF14398 Amet_3423 Amet_3424 PF14398 Amet_3424 Amet_3425 PF14398 Amet_3425 Amet_3426 PF02875 Mur ligase family, glutamate ligase domain Amet_3426 PF08245 Mur ligase middle domain Amet_3427 PF00768 D-alanyl-D-alanine carboxypeptidase Amet_3428 PF14398 Amet_3428 Amet_3429 PF14398 Amet_3429 Amet_3430 PF00188 Cysteine-rich secretory protein family Amet_3436 PF00535 Glycosyl transferase family 2 Amet_3437 PF01391 Collagen triple helix repeat (20 copies) Amet_3438 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Amet_3439 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Amet_3439 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Amet_3439 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Amet_3442 PF01370 NAD dependent epimerase/dehydratase family Amet_3443 PF13524 Glycosyl transferases group 1 Amet_3444 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Amet_3444 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Amet_3445 PF00132 Bacterial transferase hexapeptide (six repeats) Amet_3446 PF14398 Amet_3446 Amet_3448 PF14398 Amet_3448 Amet_3450 PF13704 Amet_3450 Amet_3452 PF00534 Glycosyl transferases group 1 Amet_3454 PF02645 Uncharacterised protein, DegV family COG1307 Amet_3455 PF00180 Isocitrate/isopropylmalate dehydrogenase Amet_3456 PF00694 Aconitase C-terminal domain Amet_3457 PF00330 Aconitase family (aconitate hydratase) Amet_3458 PF00682 HMGL-like Amet_3458 PF08502 LeuA allosteric (dimerisation) domain Amet_3459 PF14249 Amet_3459 Amet_3460 PF00890 FAD binding domain Amet_3460 PF04205 FMN-binding domain Amet_3461 PF03553 Amet_3461 Amet_3462 PF04461 Protein of unknown function (DUF520) Amet_3464 PF07308 Amet_3464 Amet_3466 PF00210 Ferritin-like domain Amet_3467 PF02028 BCCT family transporter Amet_3468 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Amet_3468 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Amet_3469 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Amet_3469 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Amet_3470 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Amet_3471 PF00395 S-layer homology domain Amet_3473 PF05137 Amet_3473 Amet_3474 PF11104 Type IV pilus assembly protein PilM; Amet_3475 PF01478 Type IV leader peptidase family Amet_3475 PF06750 Amet_3475 Amet_3477 PF07963 Prokaryotic N-terminal methylation motif Amet_3478 PF07963 Prokaryotic N-terminal methylation motif Amet_3479 PF07963 Prokaryotic N-terminal methylation motif Amet_3480 PF00482 Type II secretion system (T2SS), protein F Amet_3481 PF00437 Type II/IV secretion system protein Amet_3482 PF00437 Type II/IV secretion system protein Amet_3482 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Amet_3483 PF00990 GGDEF domain Amet_3483 PF13426 PAS domain Amet_3483 PF13487 HD domain Amet_3484 PF04055 Radical SAM superfamily Amet_3485 PF02310 B12 binding domain Amet_3485 PF04055 Radical SAM superfamily Amet_3486 PF13847 Methyltransferase domain Amet_3487 PF02310 B12 binding domain Amet_3487 PF04055 Radical SAM superfamily Amet_3488 PF13480 Acetyltransferase (GNAT) domain Amet_3490 PF00155 Aminotransferase class I and II Amet_3491 PF10672 S-adenosylmethionine-dependent methyltransferase Amet_3492 PF00009 Elongation factor Tu GTP binding domain Amet_3492 PF01583 Adenylylsulphate kinase Amet_3493 PF01507 Phosphoadenosine phosphosulfate reductase family Amet_3494 PF14697 4Fe-4S dicluster domain Amet_3495 PF00890 FAD binding domain Amet_3495 PF02910 Fumarate reductase flavoprotein C-term Amet_3496 PF01583 Adenylylsulphate kinase Amet_3497 PF00939 Sodium:sulfate symporter transmembrane region Amet_3499 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Amet_3499 PF01206 Sulfurtransferase TusA Amet_3499 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Amet_3500 PF14464 Prokaryotic homologs of the JAB domain Amet_3501 PF00899 ThiF family Amet_3502 PF02597 ThiS family Amet_3503 PF04073 Aminoacyl-tRNA editing domain Amet_3505 PF00440 Bacterial regulatory proteins, tetR family Amet_3505 PF08359 YsiA-like protein, C-terminal region Amet_3508 PF13280 Amet_3508 Amet_3509 PF02566 OsmC-like protein Amet_3510 PF01212 Beta-eliminating lyase Amet_3511 PF01970 Amet_3511 Amet_3512 PF07331 Amet_3512 Amet_3513 PF03401 Tripartite tricarboxylate transporter family receptor Amet_3514 PF00730 HhH-GPD superfamily base excision DNA repair protein Amet_3514 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Amet_3515 PF00682 HMGL-like Amet_3516 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Amet_3517 PF02579 Dinitrogenase iron-molybdenum cofactor Amet_3517 PF04055 Radical SAM superfamily Amet_3517 PF13394 4Fe-4S single cluster domain Amet_3518 PF00148 Nitrogenase component 1 type Oxidoreductase Amet_3519 PF00148 Nitrogenase component 1 type Oxidoreductase Amet_3520 PF00148 Nitrogenase component 1 type Oxidoreductase Amet_3521 PF00148 Nitrogenase component 1 type Oxidoreductase Amet_3522 PF00543 Nitrogen regulatory protein P-II Amet_3523 PF00543 Nitrogen regulatory protein P-II Amet_3524 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Amet_3531 PF06808 Amet_3531 Amet_3532 PF04290 Amet_3532 Amet_3533 PF03480 Bacterial extracellular solute-binding protein, family 7 Amet_3534 PF00920 Dehydratase family Amet_3535 PF00072 Response regulator receiver domain Amet_3535 PF12833 Helix-turn-helix domain Amet_3536 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3536 PF06580 Amet_3536 Amet_3536 PF07883 Cupin domain Amet_3536 PF10114 Amet_3536 Amet_3537 PF06165 Glycosyltransferase family 36 Amet_3537 PF10091 Putative glucoamylase Amet_3537 PF17167 Amet_3537 Amet_3538 PF00132 Bacterial transferase hexapeptide (six repeats) Amet_3538 PF00483 Nucleotidyl transferase Amet_3538 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Amet_3539 PF00246 Zinc carboxypeptidase Amet_3539 PF00395 S-layer homology domain Amet_3539 PF04389 Peptidase family M28 Amet_3541 PF11775 Amet_3541 Amet_3542 PF07728 AAA domain (dynein-related subfamily) Amet_3543 PF01297 Periplasmic solute binding protein family Amet_3545 PF02811 PHP domain Amet_3546 PF04143 Amet_3546 Amet_3547 PF01206 Sulfurtransferase TusA Amet_3548 PF11823 Amet_3548 Amet_3551 PF02687 Amet_3551 Amet_3552 PF00005 ABC transporter Amet_3553 PF02687 Amet_3553 Amet_3554 PF00005 ABC transporter Amet_3555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3556 PF00072 Response regulator receiver domain Amet_3556 PF00486 Transcriptional regulatory protein, C terminal Amet_3560 PF01695 IstB-like ATP binding protein Amet_3561 PF00665 Integrase core domain Amet_3563 PF00072 Response regulator receiver domain Amet_3563 PF04397 LytTr DNA-binding domain Amet_3565 PF07833 Copper amine oxidase N-terminal domain Amet_3565 PF08305 NPCBM/NEW2 domain Amet_3566 PF11381 Amet_3566 Amet_3567 PF14501 GHKL domain Amet_3568 PF14501 GHKL domain Amet_3570 PF01668 SmpB protein Amet_3571 PF02080 TrkA-C domain Amet_3572 PF00575 S1 RNA binding domain Amet_3572 PF00773 RNB domain Amet_3572 PF08206 Ribonuclease B OB domain Amet_3573 PF06961 Amet_3573 Amet_3574 PF03030 Inorganic H+ pyrophosphatase Amet_3575 PF03840 Preprotein translocase SecG subunit Amet_3576 PF00113 Enolase, C-terminal TIM barrel domain Amet_3576 PF03952 Enolase, N-terminal domain Amet_3577 PF01676 Metalloenzyme superfamily Amet_3577 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Amet_3578 PF00121 Triosephosphate isomerase Amet_3579 PF00162 Phosphoglycerate kinase Amet_3580 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Amet_3580 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Amet_3581 PF04198 Putative sugar-binding domain Amet_3582 PF00309 Amet_3582 Amet_3582 PF04552 Sigma-54, DNA binding domain Amet_3582 PF04963 Sigma-54 factor, core binding domain Amet_3583 PF02653 Amet_3583 Amet_3584 PF02653 Amet_3584 Amet_3585 PF00005 ABC transporter Amet_3586 PF04055 Radical SAM superfamily Amet_3586 PF13353 4Fe-4S single cluster domain Amet_3587 PF11230 Amet_3587 Amet_3588 PF02608 Basic membrane protein Amet_3589 PF02504 Fatty acid synthesis protein Amet_3590 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Amet_3593 PF09338 Amet_3593 Amet_3594 PF00085 Thioredoxin Amet_3595 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amet_3597 PF02645 Uncharacterised protein, DegV family COG1307 Amet_3598 PF00588 SpoU rRNA Methylase family Amet_3600 PF09557 Amet_3600 Amet_3601 PF09557 Amet_3601 Amet_3602 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Amet_3602 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Amet_3603 PF06245 Amet_3603 Amet_3604 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amet_3604 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amet_3605 PF00266 Aminotransferase class-V Amet_3606 PF00579 tRNA synthetases class I (W and Y) Amet_3607 PF02645 Uncharacterised protein, DegV family COG1307 Amet_3608 PF04015 Amet_3608 Amet_3609 PF00149 Calcineurin-like phosphoesterase Amet_3609 PF00395 S-layer homology domain Amet_3609 PF02872 5'-nucleotidase, C-terminal domain Amet_3610 PF00149 Calcineurin-like phosphoesterase Amet_3610 PF01476 LysM domain Amet_3610 PF02872 5'-nucleotidase, C-terminal domain Amet_3611 PF04015 Amet_3611 Amet_3612 PF08282 haloacid dehalogenase-like hydrolase Amet_3613 PF01475 Ferric uptake regulator family Amet_3614 PF00155 Aminotransferase class I and II Amet_3615 PF03186 Amet_3615 Amet_3616 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_3616 PF07685 CobB/CobQ-like glutamine amidotransferase domain Amet_3617 PF00005 ABC transporter Amet_3618 PF01032 FecCD transport family Amet_3619 PF01497 Periplasmic binding protein Amet_3620 PF00300 Histidine phosphatase superfamily (branch 1) Amet_3621 PF02654 Amet_3621 Amet_3622 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Amet_3623 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Amet_3624 PF02450 Lecithin:cholesterol acyltransferase Amet_3625 PF09986 Amet_3625 Amet_3626 PF04294 Amet_3626 Amet_3626 PF07501 G5 domain Amet_3626 PF12229 Putative peptidoglycan binding domain Amet_3627 PF14450 Cell division protein FtsA Amet_3628 PF00633 Helix-hairpin-helix motif Amet_3628 PF00730 HhH-GPD superfamily base excision DNA repair protein Amet_3628 PF10576 Iron-sulfur binding domain of endonuclease III Amet_3629 PF04456 Protein of unknown function (DUF503) Amet_3630 PF00873 AcrB/AcrD/AcrF family Amet_3631 PF16576 Amet_3631 Amet_3633 PF00717 Peptidase S24-like Amet_3634 PF00155 Aminotransferase class I and II Amet_3635 PF05362 Lon protease (S16) C-terminal proteolytic domain Amet_3635 PF13654 AAA domain Amet_3636 PF08331 Amet_3636 Amet_3636 PF13484 Amet_3636 Amet_3636 PF13646 HEAT repeats Amet_3637 PF00717 Peptidase S24-like Amet_3638 PF05866 Endodeoxyribonuclease RusA Amet_3639 PF04306 Amet_3639 Amet_3640 PF12840 Helix-turn-helix domain Amet_3641 PF14512 Putative TM nitroreductase Amet_3642 PF04960 Glutaminase Amet_3643 PF00485 Phosphoribulokinase / Uridine kinase family Amet_3644 PF00571 CBS domain Amet_3645 PF00696 Amino acid kinase family Amet_3646 PF00171 Aldehyde dehydrogenase family Amet_3647 PF00717 Peptidase S24-like Amet_3648 PF11009 Protein of unknown function (DUF2847) Amet_3650 PF13419 Haloacid dehalogenase-like hydrolase Amet_3651 PF13367 Amet_3651 Amet_3652 PF02525 Flavodoxin-like fold Amet_3653 PF05067 Manganese containing catalase Amet_3654 PF12652 Amet_3654 Amet_3655 PF11007 Amet_3655 Amet_3656 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Amet_3657 PF13527 Acetyltransferase (GNAT) domain Amet_3658 PF03054 tRNA methyl transferase Amet_3659 PF00005 ABC transporter Amet_3660 PF00528 Binding-protein-dependent transport system inner membrane component Amet_3661 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amet_3662 PF00877 NlpC/P60 family Amet_3662 PF08239 Bacterial SH3 domain Amet_3665 PF01546 Peptidase family M20/M25/M40 Amet_3668 PF06305 Amet_3668 Amet_3669 PF00395 S-layer homology domain Amet_3669 PF02638 Amet_3669 Amet_3671 PF05958 tRNA (Uracil-5-)-methyltransferase Amet_3672 PF00849 RNA pseudouridylate synthase Amet_3672 PF01479 S4 domain Amet_3674 PF01066 CDP-alcohol phosphatidyltransferase Amet_3675 PF01116 Fructose-bisphosphate aldolase class-II Amet_3677 PF00149 Calcineurin-like phosphoesterase Amet_3678 PF04607 Region found in RelA / SpoT proteins Amet_3679 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Amet_3679 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Amet_3682 PF04055 Radical SAM superfamily Amet_3682 PF16199 Amet_3682 Amet_3683 PF07690 Major Facilitator Superfamily Amet_3685 PF00395 S-layer homology domain Amet_3685 PF00704 Glycosyl hydrolases family 18 Amet_3686 PF01476 LysM domain Amet_3688 PF04070 Amet_3688 Amet_3690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amet_3690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amet_3691 PF01966 HD domain Amet_3692 PF00009 Elongation factor Tu GTP binding domain Amet_3692 PF16658 Amet_3692 Amet_3693 PF07155 ECF-type riboflavin transporter, S component Amet_3694 PF00892 EamA-like transporter family Amet_3695 PF12682 Flavodoxin Amet_3696 PF00881 Nitroreductase family Amet_3697 PF01625 Peptide methionine sulfoxide reductase Amet_3698 PF00990 GGDEF domain Amet_3698 PF13181 Tetratricopeptide repeat Amet_3698 PF13185 GAF domain Amet_3698 PF13424 Tetratricopeptide repeat Amet_3699 PF17248 Amet_3699 Amet_3700 PF01966 HD domain Amet_3702 PF00291 Pyridoxal-phosphate dependent enzyme Amet_3702 PF00583 Acetyltransferase (GNAT) family Amet_3703 PF12671 Amet_3703 Amet_3704 PF03553 Amet_3704 Amet_3705 PF01184 Amet_3705 Amet_3706 PF01053 Cys/Met metabolism PLP-dependent enzyme Amet_3707 PF01053 Cys/Met metabolism PLP-dependent enzyme Amet_3708 PF04204 Homoserine O-succinyltransferase Amet_3709 PF01225 Mur ligase family, catalytic domain Amet_3709 PF02875 Mur ligase family, glutamate ligase domain Amet_3709 PF08245 Mur ligase middle domain Amet_3710 PF01820 D-ala D-ala ligase N-terminus Amet_3710 PF07478 D-ala D-ala ligase C-terminus Amet_3711 PF00512 His Kinase A (phospho-acceptor) domain Amet_3711 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3712 PF00072 Response regulator receiver domain Amet_3712 PF00486 Transcriptional regulatory protein, C terminal Amet_3713 PF05742 Amet_3713 Amet_3714 PF07833 Copper amine oxidase N-terminal domain Amet_3714 PF09992 Predicted periplasmic protein (DUF2233) Amet_3715 PF00072 Response regulator receiver domain Amet_3715 PF00196 Bacterial regulatory proteins, luxR family Amet_3716 PF07730 Histidine kinase Amet_3717 PF12698 ABC-2 family transporter protein Amet_3718 PF01061 Amet_3718 Amet_3719 PF00005 ABC transporter Amet_3719 PF13732 Amet_3719 Amet_3720 PF09719 Putative redox-active protein (C_GCAxxG_C_C) Amet_3721 PF03595 Voltage-dependent anion channel Amet_3722 PF00027 Cyclic nucleotide-binding domain Amet_3722 PF13545 Crp-like helix-turn-helix domain Amet_3723 PF00258 Flavodoxin Amet_3724 PF07870 Amet_3724 Amet_3725 PF00654 Voltage gated chloride channel Amet_3726 PF04239 Protein of unknown function (DUF421) Amet_3727 PF06808 Amet_3727 Amet_3728 PF04290 Amet_3728 Amet_3729 PF03480 Bacterial extracellular solute-binding protein, family 7 Amet_3731 PF02811 PHP domain Amet_3735 PF14512 Putative TM nitroreductase Amet_3736 PF08534 Redoxin Amet_3737 PF01546 Peptidase family M20/M25/M40 Amet_3737 PF07687 Peptidase dimerisation domain Amet_3738 PF03601 Amet_3738 Amet_3739 PF09962 Amet_3739 Amet_3740 PF00892 EamA-like transporter family Amet_3741 PF09413 Domain of unknown function (DUF2007) Amet_3743 PF05013 N-formylglutamate amidohydrolase Amet_3744 PF01546 Peptidase family M20/M25/M40 Amet_3744 PF07478 D-ala D-ala ligase C-terminus Amet_3745 PF01019 Gamma-glutamyltranspeptidase Amet_3746 PF09861 Domain of unknown function (DUF2088) Amet_3747 PF01565 FAD binding domain Amet_3747 PF02913 FAD linked oxidases, C-terminal domain Amet_3748 PF00766 Electron transfer flavoprotein FAD-binding domain Amet_3748 PF01012 Electron transfer flavoprotein domain Amet_3749 PF01012 Electron transfer flavoprotein domain Amet_3750 PF00392 Bacterial regulatory proteins, gntR family Amet_3750 PF07729 FCD domain Amet_3751 PF02652 Amet_3751 Amet_3752 PF06902 Divergent 4Fe-4S mono-cluster Amet_3752 PF09360 Iron-binding zinc finger CDGSH type Amet_3753 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amet_3753 PF00990 GGDEF domain Amet_3753 PF13188 PAS domain Amet_3753 PF13487 HD domain Amet_3754 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_3754 PF02743 Cache domain Amet_3755 PF00270 DEAD/DEAH box helicase Amet_3755 PF00271 Helicase conserved C-terminal domain Amet_3755 PF03880 DbpA RNA binding domain Amet_3756 PF01636 Phosphotransferase enzyme family Amet_3757 PF01008 Initiation factor 2 subunit family Amet_3758 PF00596 Class II Aldolase and Adducin N-terminal domain Amet_3759 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_3759 PF10114 Amet_3759 Amet_3760 PF01584 CheW-like domain Amet_3761 PF05975 Amet_3761 Amet_3762 PF00005 ABC transporter Amet_3763 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_3764 PF03063 Prismane/CO dehydrogenase family Amet_3765 PF13247 4Fe-4S dicluster domain Amet_3766 PF00158 Sigma-54 interaction domain Amet_3766 PF02830 V4R domain Amet_3766 PF02954 Bacterial regulatory protein, Fis family Amet_3767 PF01432 Peptidase family M3 Amet_3767 PF08439 Oligopeptidase F Amet_3768 PF07866 Protein of unknown function (DUF1653) Amet_3769 PF13307 Helicase C-terminal domain Amet_3770 PF07690 Major Facilitator Superfamily Amet_3771 PF00005 ABC transporter Amet_3772 PF01032 FecCD transport family Amet_3773 PF01032 FecCD transport family Amet_3774 PF01497 Periplasmic binding protein Amet_3775 PF12833 Helix-turn-helix domain Amet_3776 PF01795 MraW methylase family Amet_3777 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_3777 PF12729 Amet_3777 Amet_3779 PF01043 SecA preprotein cross-linking domain Amet_3779 PF07516 SecA Wing and Scaffold domain Amet_3779 PF07517 SecA DEAD-like domain Amet_3781 PF00083 Sugar (and other) transporter Amet_3782 PF07883 Cupin domain Amet_3783 PF01232 Mannitol dehydrogenase Rossmann domain Amet_3783 PF08125 Mannitol dehydrogenase C-terminal domain Amet_3784 PF03786 D-mannonate dehydratase (UxuA) Amet_3785 PF14317 Amet_3785 Amet_3786 PF06808 Amet_3786 Amet_3787 PF04290 Amet_3787 Amet_3788 PF03480 Bacterial extracellular solute-binding protein, family 7 Amet_3789 PF00392 Bacterial regulatory proteins, gntR family Amet_3789 PF07729 FCD domain Amet_3791 PF00176 SNF2 family N-terminal domain Amet_3791 PF00271 Helicase conserved C-terminal domain Amet_3791 PF12419 Amet_3791 Amet_3792 PF07929 Plasmid pRiA4b ORF-3-like protein Amet_3793 PF01797 Transposase IS200 like Amet_3794 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Amet_3794 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Amet_3795 PF00480 ROK family Amet_3795 PF13412 Winged helix-turn-helix DNA-binding Amet_3796 PF01261 Xylose isomerase-like TIM barrel Amet_3797 PF02653 Amet_3797 Amet_3798 PF00005 ABC transporter Amet_3799 PF13407 Periplasmic binding protein domain Amet_3800 PF01263 Aldose 1-epimerase Amet_3803 PF03442 Carbohydrate binding domain X2 Amet_3803 PF07523 Bacterial Ig-like domain (group 3) Amet_3803 PF07833 Copper amine oxidase N-terminal domain Amet_3803 PF12733 Amet_3803 Amet_3804 PF00072 Response regulator receiver domain Amet_3804 PF00486 Transcriptional regulatory protein, C terminal Amet_3804 PF03704 Bacterial transcriptional activator domain Amet_3805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3805 PF06580 Amet_3805 Amet_3805 PF16927 Amet_3805 Amet_3806 PF01554 MatE Amet_3807 PF00005 ABC transporter Amet_3807 PF00664 ABC transporter transmembrane region Amet_3808 PF00005 ABC transporter Amet_3808 PF00664 ABC transporter transmembrane region Amet_3809 PF12833 Helix-turn-helix domain Amet_3811 PF13490 Putative zinc-finger Amet_3812 PF04542 Sigma-70 region 2 Amet_3814 PF00583 Acetyltransferase (GNAT) family Amet_3814 PF14268 Amet_3814 Amet_3815 PF12674 Amet_3815 Amet_3816 PF01385 Amet_3816 Amet_3816 PF07282 Amet_3816 Amet_3816 PF12323 Amet_3816 Amet_3817 PF01797 Transposase IS200 like Amet_3818 PF08279 HTH domain Amet_3819 PF01609 Transposase DDE domain Amet_3821 PF01797 Transposase IS200 like Amet_3822 PF00936 BMC domain Amet_3823 PF06130 Amet_3823 Amet_3824 PF00171 Aldehyde dehydrogenase family Amet_3825 PF00936 BMC domain Amet_3826 PF06249 Ethanolamine utilisation protein EutQ Amet_3827 PF00936 BMC domain Amet_3828 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Amet_3828 PF10531 SLBB domain Amet_3828 PF13375 RnfC Barrel sandwich hybrid domain Amet_3828 PF13534 4Fe-4S dicluster domain Amet_3829 PF03319 Ethanolamine utilisation protein EutN/carboxysome Amet_3830 PF00936 BMC domain Amet_3831 PF11104 Type IV pilus assembly protein PilM; Amet_3833 PF10662 Ethanolamine utilisation - propanediol utilisation Amet_3834 PF00936 BMC domain Amet_3835 PF04055 Radical SAM superfamily Amet_3835 PF13187 4Fe-4S dicluster domain Amet_3836 PF01228 Glycine radical Amet_3836 PF02901 Pyruvate formate lyase Amet_3837 PF00936 BMC domain Amet_3838 PF00936 BMC domain Amet_3841 PF01633 Choline/ethanolamine kinase Amet_3842 PF00465 Iron-containing alcohol dehydrogenase Amet_3843 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3843 PF06580 Amet_3843 Amet_3843 PF10114 Amet_3843 Amet_3844 PF00072 Response regulator receiver domain Amet_3844 PF12833 Helix-turn-helix domain Amet_3846 PF06445 GyrI-like small molecule binding domain Amet_3846 PF12833 Helix-turn-helix domain Amet_3847 PF00005 ABC transporter Amet_3850 PF13468 Glyoxalase-like domain Amet_3851 PF00440 Bacterial regulatory proteins, tetR family Amet_3852 PF00753 Metallo-beta-lactamase superfamily Amet_3854 PF01695 IstB-like ATP binding protein Amet_3855 PF00665 Integrase core domain Amet_3856 PF01169 Amet_3856 Amet_3859 PF00890 FAD binding domain Amet_3859 PF04205 FMN-binding domain Amet_3860 PF00440 Bacterial regulatory proteins, tetR family Amet_3862 PF00440 Bacterial regulatory proteins, tetR family Amet_3863 PF00890 FAD binding domain Amet_3867 PF00005 ABC transporter Amet_3868 PF00512 His Kinase A (phospho-acceptor) domain Amet_3868 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Amet_3875 PF03466 LysR substrate binding domain Amet_3876 PF01554 MatE Amet_3881 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_3881 PF02743 Cache domain Amet_3883 PF14104 Amet_3883 Amet_3885 PF16138 Amet_3885 Amet_3887 PF07690 Major Facilitator Superfamily Amet_3889 PF01979 Amidohydrolase family Amet_3891 PF09861 Domain of unknown function (DUF2088) Amet_3892 PF03180 NLPA lipoprotein Amet_3893 PF00528 Binding-protein-dependent transport system inner membrane component Amet_3894 PF00005 ABC transporter Amet_3894 PF09383 NIL domain Amet_3901 PF05569 BlaR1 peptidase M56 Amet_3902 PF03965 Penicillinase repressor Amet_3904 PF01061 Amet_3904 Amet_3905 PF00005 ABC transporter Amet_3908 PF00005 ABC transporter Amet_3909 PF12802 MarR family Amet_3911 PF01695 IstB-like ATP binding protein Amet_3912 PF03551 Transcriptional regulator PadR-like family Amet_3913 PF03629 Domain of unknown function (DUF303) Amet_3916 PF06445 GyrI-like small molecule binding domain Amet_3917 PF03551 Transcriptional regulator PadR-like family Amet_3918 PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region Amet_3919 PF01609 Transposase DDE domain Amet_3920 PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal Amet_3922 PF01841 Transglutaminase-like superfamily Amet_3923 PF12833 Helix-turn-helix domain Amet_3926 PF00132 Bacterial transferase hexapeptide (six repeats) Amet_3932 PF02535 Amet_3932 Amet_3934 PF00141 Peroxidase Amet_3935 PF07739 TipAS antibiotic-recognition domain Amet_3935 PF13411 MerR HTH family regulatory protein Amet_3936 PF01061 Amet_3936 Amet_3937 PF00005 ABC transporter Amet_3937 PF13732 Amet_3937 Amet_3938 PF12867 DinB superfamily Amet_3939 PF09860 Amet_3939 Amet_3941 PF00392 Bacterial regulatory proteins, gntR family Amet_3942 PF00005 ABC transporter Amet_3944 PF04020 Amet_3944 Amet_3947 PF09862 Amet_3947 Amet_3948 PF00082 Subtilase family Amet_3952 PF06486 Protein of unknown function (DUF1093) Amet_3953 PF02687 Amet_3953 Amet_3954 PF00005 ABC transporter Amet_3955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_3956 PF00072 Response regulator receiver domain Amet_3956 PF00486 Transcriptional regulatory protein, C terminal Amet_3957 PF06803 Amet_3957 Amet_3958 PF13376 Amet_3958 Amet_3962 PF00069 Protein kinase domain Amet_3966 PF03235 Amet_3966 Amet_3969 PF03432 Amet_3969 Amet_3970 PF00665 Integrase core domain Amet_3971 PF01695 IstB-like ATP binding protein Amet_3975 PF13476 AAA domain Amet_3978 PF14283 Amet_3978 Amet_3980 PF01551 Peptidase family M23 Amet_3983 PF12666 Amet_3983 Amet_3988 PF11185 Amet_3988 Amet_3991 PF12687 Amet_3991 Amet_3992 PF06970 Replication initiator protein A (RepA) N-terminus Amet_3993 PF02195 ParB-like nuclease domain Amet_3994 PF13614 AAA domain Amet_3996 PF01758 Sodium Bile acid symporter family Amet_3997 PF00122 E1-E2 ATPase Amet_3997 PF00702 haloacid dehalogenase-like hydrolase Amet_3999 PF01022 Bacterial regulatory protein, arsR family Amet_4000 PF04324 BFD-like [2Fe-2S] binding domain Amet_4002 PF14281 Amet_4002 Amet_4004 PF13443 Cro/C1-type HTH DNA-binding domain Amet_4005 PF00239 Resolvase, N terminal domain Amet_4005 PF07508 Recombinase Amet_4005 PF13408 Recombinase zinc beta ribbon domain Amet_4007 PF00239 Resolvase, N terminal domain Amet_4007 PF07508 Recombinase Amet_4007 PF13408 Recombinase zinc beta ribbon domain Amet_4009 PF00476 DNA polymerase family A Amet_4010 PF07463 NUMOD4 motif Amet_4010 PF13392 HNH endonuclease Amet_4011 PF10991 Protein of unknown function (DUF2815) Amet_4012 PF10926 Amet_4012 Amet_4015 PF01510 N-acetylmuramoyl-L-alanine amidase Amet_4015 PF05036 Sporulation related domain Amet_4016 PF05105 Amet_4016 Amet_4024 PF04883 Amet_4024 Amet_4025 PF05521 Phage head-tail joining protein Amet_4026 PF05135 Phage gp6-like head-tail connector protein Amet_4028 PF05065 Phage capsid family Amet_4029 PF00574 Clp protease Amet_4030 PF04860 Phage portal protein Amet_4033 PF03354 Amet_4033 Amet_4037 PF14192 Amet_4037 Amet_4039 PF01555 DNA methylase Amet_4039 PF02195 ParB-like nuclease domain Amet_4040 PF00438 S-adenosylmethionine synthetase, N-terminal domain Amet_4040 PF02772 S-adenosylmethionine synthetase, central domain Amet_4040 PF02773 S-adenosylmethionine synthetase, C-terminal domain Amet_4041 PF05119 Amet_4041 Amet_4042 PF01844 HNH endonuclease Amet_4043 PF04480 Protein of unknown function (DUF559) Amet_4044 PF07374 Amet_4044 Amet_4046 PF00176 SNF2 family N-terminal domain Amet_4047 PF13392 HNH endonuclease Amet_4049 PF05272 Amet_4049 Amet_4050 PF14359 Domain of unknown function (DUF4406) Amet_4052 PF09669 Amet_4052 Amet_4055 PF01863 Protein of unknown function DUF45 Amet_4056 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Amet_4056 PF04851 Type III restriction enzyme, res subunit Amet_4056 PF11867 Amet_4056 Amet_4057 PF01420 Type I restriction modification DNA specificity domain Amet_4058 PF02384 N-6 DNA Methylase Amet_4058 PF12161 HsdM N-terminal domain Amet_4059 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Amet_4060 PF01938 TRAM domain Amet_4060 PF05958 tRNA (Uracil-5-)-methyltransferase Amet_4061 PF10646 Amet_4061 Amet_4062 PF00248 Aldo/keto reductase family Amet_4062 PF13534 4Fe-4S dicluster domain Amet_4063 PF04186 Amet_4063 Amet_4064 PF03061 Thioesterase superfamily Amet_4065 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Amet_4066 PF07228 Stage II sporulation protein E (SpoIIE) Amet_4067 PF00037 4Fe-4S binding domain Amet_4067 PF02906 Iron only hydrogenase large subunit, C-terminal domain Amet_4067 PF04060 Putative Fe-S cluster Amet_4067 PF13188 PAS domain Amet_4068 PF00224 Pyruvate kinase, barrel domain Amet_4068 PF00391 PEP-utilising enzyme, mobile domain Amet_4068 PF02887 Pyruvate kinase, alpha/beta domain Amet_4069 PF00365 Phosphofructokinase Amet_4071 PF01336 OB-fold nucleic acid binding domain Amet_4071 PF02811 PHP domain Amet_4071 PF07733 Bacterial DNA polymerase III alpha subunit Amet_4071 PF14579 Helix-hairpin-helix motif Amet_4072 PF03704 Bacterial transcriptional activator domain Amet_4072 PF13191 AAA ATPase domain Amet_4072 PF13374 Tetratricopeptide repeat Amet_4073 PF02971 Formiminotransferase domain Amet_4073 PF07837 Formiminotransferase domain, N-terminal subdomain Amet_4074 PF01175 Urocanase Amet_4074 PF17391 Amet_4074 Amet_4074 PF17392 Amet_4074 Amet_4075 PF01712 Deoxynucleoside kinase Amet_4076 PF01712 Deoxynucleoside kinase Amet_4080 PF01695 IstB-like ATP binding protein Amet_4081 PF00665 Integrase core domain Amet_4082 PF07833 Copper amine oxidase N-terminal domain Amet_4083 PF04647 Amet_4083 Amet_4086 PF14501 GHKL domain Amet_4087 PF00072 Response regulator receiver domain Amet_4087 PF04397 LytTr DNA-binding domain Amet_4088 PF02650 WhiA C-terminal HTH domain Amet_4088 PF10298 WhiA N-terminal LAGLIDADG-like domain Amet_4088 PF14527 WhiA LAGLIDADG-like domain Amet_4089 PF07561 Amet_4089 Amet_4090 PF00293 NUDIX domain Amet_4091 PF01933 Uncharacterised protein family UPF0052 Amet_4092 PF03668 Amet_4092 Amet_4093 PF01565 FAD binding domain Amet_4093 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Amet_4094 PF13416 Bacterial extracellular solute-binding protein Amet_4096 PF04055 Radical SAM superfamily Amet_4096 PF06463 Molybdenum Cofactor Synthesis C Amet_4096 PF13353 4Fe-4S single cluster domain Amet_4097 PF02915 Rubrerythrin Amet_4098 PF00384 Molybdopterin oxidoreductase Amet_4098 PF01568 Molydopterin dinucleotide binding domain Amet_4099 PF00384 Molybdopterin oxidoreductase Amet_4099 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Amet_4099 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Amet_4099 PF13510 2Fe-2S iron-sulfur cluster binding domain Amet_4099 PF14697 4Fe-4S dicluster domain Amet_4100 PF00037 4Fe-4S binding domain Amet_4100 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Amet_4100 PF10531 SLBB domain Amet_4100 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Amet_4102 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Amet_4103 PF01926 50S ribosome-binding GTPase Amet_4104 PF04055 Radical SAM superfamily Amet_4104 PF06968 Biotin and Thiamin Synthesis associated domain Amet_4104 PF11823 Amet_4104 Amet_4105 PF04055 Radical SAM superfamily Amet_4105 PF06968 Biotin and Thiamin Synthesis associated domain Amet_4107 PF00037 4Fe-4S binding domain Amet_4107 PF02256 Iron hydrogenase small subunit Amet_4107 PF02906 Iron only hydrogenase large subunit, C-terminal domain Amet_4107 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Amet_4107 PF13510 2Fe-2S iron-sulfur cluster binding domain Amet_4108 PF00037 4Fe-4S binding domain Amet_4108 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Amet_4108 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Amet_4108 PF10531 SLBB domain Amet_4108 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Amet_4110 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Amet_4111 PF00158 Sigma-54 interaction domain Amet_4111 PF01590 GAF domain Amet_4111 PF02954 Bacterial regulatory protein, Fis family Amet_4112 PF00291 Pyridoxal-phosphate dependent enzyme Amet_4113 PF02734 DAK2 domain Amet_4114 PF02733 Dak1 domain Amet_4115 PF00005 ABC transporter Amet_4116 PF00005 ABC transporter Amet_4116 PF12399 Branched-chain amino acid ATP-binding cassette transporter Amet_4117 PF02653 Amet_4117 Amet_4118 PF02653 Amet_4118 Amet_4119 PF13458 Periplasmic binding protein Amet_4120 PF14196 Amet_4120 Amet_4121 PF00480 ROK family Amet_4122 PF02603 HPr Serine kinase N terminus Amet_4122 PF07475 HPr Serine kinase C-terminal domain Amet_4123 PF04024 Amet_4123 Amet_4124 PF01541 GIY-YIG catalytic domain Amet_4124 PF02151 UvrB/uvrC motif Amet_4124 PF08459 UvrC Helix-hairpin-helix N-terminal Amet_4124 PF12826 Helix-hairpin-helix motif Amet_4125 PF07833 Copper amine oxidase N-terminal domain Amet_4126 PF00005 ABC transporter Amet_4127 PF00271 Helicase conserved C-terminal domain Amet_4127 PF02151 UvrB/uvrC motif Amet_4127 PF04851 Type III restriction enzyme, res subunit Amet_4127 PF12344 Ultra-violet resistance protein B Amet_4128 PF03572 Peptidase family S41 Amet_4128 PF13180 PDZ domain Amet_4129 PF01551 Peptidase family M23 Amet_4130 PF02687 Amet_4130 Amet_4131 PF00005 ABC transporter Amet_4132 PF01812 5-formyltetrahydrofolate cyclo-ligase family Amet_4133 PF05362 Lon protease (S16) C-terminal proteolytic domain Amet_4133 PF13654 AAA domain Amet_4134 PF01476 LysM domain Amet_4135 PF09992 Predicted periplasmic protein (DUF2233) Amet_4136 PF14343 Amet_4136 Amet_4138 PF02588 Amet_4138 Amet_4138 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Amet_4139 PF03808 Amet_4139 Amet_4140 PF04230 Amet_4140 Amet_4143 PF02452 PemK-like protein Amet_4144 PF01402 Ribbon-helix-helix protein, copG family Amet_4145 PF00842 Alanine racemase, C-terminal domain Amet_4145 PF01168 Alanine racemase, N-terminal domain Amet_4146 PF17131 Amet_4146 Amet_4147 PF01648 4'-phosphopantetheinyl transferase superfamily Amet_4150 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Amet_4151 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Amet_4151 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Amet_4152 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Amet_4152 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Amet_4153 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Amet_4154 PF04039 Amet_4154 Amet_4156 PF13244 Amet_4156 Amet_4157 PF03334 Amet_4157 Amet_4158 PF04066 Amet_4158 Amet_4159 PF01899 Amet_4159 Amet_4163 PF12698 ABC-2 family transporter protein Amet_4164 PF00005 ABC transporter Amet_4166 PF00571 CBS domain Amet_4167 PF13476 AAA domain Amet_4167 PF13558 Putative exonuclease SbcCD, C subunit Amet_4168 PF00149 Calcineurin-like phosphoesterase Amet_4168 PF12320 Type 5 capsule protein repressor C-terminal domain Amet_4169 PF00580 UvrD/REP helicase N-terminal domain Amet_4169 PF12705 PD-(D/E)XK nuclease superfamily Amet_4169 PF13361 UvrD-like helicase C-terminal domain Amet_4171 PF00395 S-layer homology domain Amet_4172 PF00005 ABC transporter Amet_4176 PF12705 PD-(D/E)XK nuclease superfamily Amet_4177 PF13487 HD domain Amet_4179 PF01336 OB-fold nucleic acid binding domain Amet_4179 PF01966 HD domain Amet_4180 PF02915 Rubrerythrin Amet_4181 PF01979 Amidohydrolase family Amet_4182 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Amet_4183 PF03702 Uncharacterised protein family (UPF0075) Amet_4184 PF04794 YdjC-like protein Amet_4185 PF02056 Family 4 glycosyl hydrolase Amet_4185 PF11975 Family 4 glycosyl hydrolase C-terminal domain Amet_4186 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit Amet_4187 PF02378 Phosphotransferase system, EIIC Amet_4188 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Amet_4189 PF13580 SIS domain Amet_4190 PF01380 SIS domain Amet_4190 PF01418 Helix-turn-helix domain, rpiR family Amet_4191 PF01869 BadF/BadG/BcrA/BcrD ATPase family Amet_4193 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit Amet_4194 PF02056 Family 4 glycosyl hydrolase Amet_4194 PF11975 Family 4 glycosyl hydrolase C-terminal domain Amet_4195 PF02378 Phosphotransferase system, EIIC Amet_4196 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Amet_4197 PF00158 Sigma-54 interaction domain Amet_4197 PF00874 PRD domain Amet_4197 PF03610 PTS system fructose IIA component Amet_4198 PF02666 Amet_4198 Amet_4200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Amet_4200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Amet_4201 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain Amet_4201 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain Amet_4202 PF00072 Response regulator receiver domain Amet_4202 PF00196 Bacterial regulatory proteins, luxR family Amet_4203 PF07730 Histidine kinase Amet_4204 PF12698 ABC-2 family transporter protein Amet_4205 PF12698 ABC-2 family transporter protein Amet_4206 PF00005 ABC transporter Amet_4206 PF13732 Amet_4206 Amet_4207 PF00156 Phosphoribosyl transferase domain Amet_4208 PF01180 Dihydroorotate dehydrogenase Amet_4209 PF00970 Oxidoreductase FAD-binding domain Amet_4209 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Amet_4210 PF02142 MGS-like domain Amet_4210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Amet_4210 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Amet_4211 PF00117 Glutamine amidotransferase class-I Amet_4211 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Amet_4212 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Amet_4213 PF01979 Amidohydrolase family Amet_4215 PF04951 D-aminopeptidase Amet_4216 PF00817 impB/mucB/samB family Amet_4216 PF11798 IMS family HHH motif Amet_4216 PF11799 impB/mucB/samB family C-terminal domain Amet_4217 PF00152 tRNA synthetases class II (D, K and N) Amet_4217 PF01336 OB-fold nucleic acid binding domain Amet_4218 PF07690 Major Facilitator Superfamily Amet_4219 PF13411 MerR HTH family regulatory protein Amet_4219 PF13649 Methyltransferase domain Amet_4220 PF06733 DEAD_2 Amet_4220 PF06777 Amet_4220 Amet_4220 PF12705 PD-(D/E)XK nuclease superfamily Amet_4220 PF13307 Helicase C-terminal domain Amet_4223 PF03862 Amet_4223 Amet_4224 PF07451 Stage V sporulation protein AD (SpoVAD) Amet_4225 PF03862 Amet_4225 Amet_4226 PF04239 Protein of unknown function (DUF421) Amet_4226 PF07870 Amet_4226 Amet_4227 PF07870 Amet_4227 Amet_4228 PF01048 Phosphorylase superfamily Amet_4229 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amet_4229 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amet_4230 PF01554 MatE Amet_4231 PF01987 Mitochondrial biogenesis AIM24 Amet_4232 PF02581 Thiamine monophosphate synthase/TENI Amet_4233 PF01964 ThiC family Amet_4234 PF04055 Radical SAM superfamily Amet_4234 PF06968 Biotin and Thiamin Synthesis associated domain Amet_4235 PF05690 Thiazole biosynthesis protein ThiG Amet_4236 PF00899 ThiF family Amet_4236 PF14453 Amet_4236 Amet_4237 PF02597 ThiS family Amet_4239 PF10688 Amet_4239 Amet_4243 PF07287 Amet_4243 Amet_4244 PF03600 Citrate transporter Amet_4245 PF00158 Sigma-54 interaction domain Amet_4245 PF00989 PAS fold Amet_4245 PF02954 Bacterial regulatory protein, Fis family Amet_4246 PF01144 Coenzyme A transferase Amet_4247 PF01144 Coenzyme A transferase Amet_4248 PF00158 Sigma-54 interaction domain Amet_4248 PF02954 Bacterial regulatory protein, Fis family Amet_4249 PF13786 Domain of unknown function (DUF4179) Amet_4250 PF04542 Sigma-70 region 2 Amet_4250 PF04545 Sigma-70, region 4 Amet_4252 PF01476 LysM domain Amet_4252 PF01522 Polysaccharide deacetylase Amet_4253 PF02073 Thermophilic metalloprotease (M29) Amet_4254 PF00749 tRNA synthetases class I (E and Q), catalytic domain Amet_4254 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Amet_4255 PF03167 Uracil DNA glycosylase superfamily Amet_4256 PF01554 MatE Amet_4257 PF01863 Protein of unknown function DUF45 Amet_4258 PF01177 Asp/Glu/Hydantoin racemase Amet_4259 PF02915 Rubrerythrin Amet_4260 PF03006 Amet_4260 Amet_4262 PF03631 Amet_4262 Amet_4263 PF04909 Amidohydrolase Amet_4264 PF03795 YCII-related domain Amet_4265 PF02535 Amet_4265 Amet_4266 PF01329 Pterin 4 alpha carbinolamine dehydratase Amet_4267 PF00107 Zinc-binding dehydrogenase Amet_4267 PF08240 Alcohol dehydrogenase GroES-like domain Amet_4268 PF00294 pfkB family carbohydrate kinase Amet_4269 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Amet_4269 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Amet_4269 PF02378 Phosphotransferase system, EIIC Amet_4270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Amet_4270 PF00874 PRD domain Amet_4270 PF08279 HTH domain Amet_4271 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Amet_4271 PF02378 Phosphotransferase system, EIIC Amet_4272 PF07875 Amet_4272 Amet_4274 PF00180 Isocitrate/isopropylmalate dehydrogenase Amet_4275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amet_4275 PF01842 ACT domain Amet_4275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amet_4278 PF00293 NUDIX domain Amet_4279 PF02517 CAAX protease self-immunity Amet_4282 PF00583 Acetyltransferase (GNAT) family Amet_4284 PF02163 Peptidase family M50 Amet_4288 PF01966 HD domain Amet_4290 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Amet_4290 PF08388 Amet_4290 Amet_4291 PF00239 Resolvase, N terminal domain Amet_4291 PF07508 Recombinase Amet_4291 PF13408 Recombinase zinc beta ribbon domain Amet_4292 PF13655 Amet_4292 Amet_4293 PF12900 Pyridoxamine 5'-phosphate oxidase Amet_4295 PF13649 Methyltransferase domain Amet_4297 PF01844 HNH endonuclease Amet_4299 PF01380 SIS domain Amet_4299 PF13522 Glutamine amidotransferase domain Amet_4300 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Amet_4300 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Amet_4300 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Amet_4300 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Amet_4301 PF02554 Amet_4301 Amet_4301 PF13722 Amet_4301 Amet_4303 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amet_4304 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amet_4305 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amet_4305 PF17147 Amet_4305 Amet_4306 PF12838 4Fe-4S dicluster domain Amet_4307 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_4308 PF00871 Acetokinase family Amet_4309 PF01515 Phosphate acetyl/butaryl transferase Amet_4310 PF00871 Acetokinase family Amet_4311 PF00158 Sigma-54 interaction domain Amet_4311 PF00989 PAS fold Amet_4311 PF02954 Bacterial regulatory protein, Fis family Amet_4312 PF07949 YbbR-like protein Amet_4313 PF02457 DisA bacterial checkpoint controller nucleotide-binding Amet_4314 PF04972 BON domain Amet_4316 PF01488 Shikimate / quinate 5-dehydrogenase Amet_4317 PF00202 Aminotransferase class-III Amet_4318 PF07885 Ion channel Amet_4320 PF07613 Amet_4320 Amet_4321 PF02659 Amet_4321 Amet_4322 PF07784 Amet_4322 Amet_4323 PF00512 His Kinase A (phospho-acceptor) domain Amet_4323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_4324 PF07155 ECF-type riboflavin transporter, S component Amet_4325 PF03358 NADPH-dependent FMN reductase Amet_4326 PF00462 Glutaredoxin Amet_4327 PF00633 Helix-hairpin-helix motif Amet_4327 PF00730 HhH-GPD superfamily base excision DNA repair protein Amet_4327 PF14815 NUDIX domain Amet_4328 PF00578 AhpC/TSA family Amet_4329 PF01169 Amet_4329 Amet_4330 PF00462 Glutaredoxin Amet_4331 PF07009 Protein of unknown function (DUF1312) Amet_4332 PF07456 Amet_4332 Amet_4333 PF14276 Amet_4333 Amet_4334 PF04239 Protein of unknown function (DUF421) Amet_4335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Amet_4336 PF01546 Peptidase family M20/M25/M40 Amet_4336 PF07687 Peptidase dimerisation domain Amet_4337 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Amet_4337 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Amet_4338 PF00171 Aldehyde dehydrogenase family Amet_4339 PF02673 Amet_4339 Amet_4341 PF09693 Amet_4341 Amet_4345 PF04865 Amet_4345 Amet_4351 PF10145 Amet_4351 Amet_4355 PF11863 Amet_4355 Amet_4359 PF13262 Amet_4359 Amet_4361 PF09950 Amet_4361 Amet_4363 PF09979 Amet_4363 Amet_4364 PF04233 Amet_4364 Amet_4365 PF06381 Amet_4365 Amet_4367 PF00467 KOW motif Amet_4367 PF02357 Transcription termination factor nusG Amet_4369 PF11985 Amet_4369 Amet_4373 PF08765 Mor transcription activator family Amet_4374 PF01520 N-acetylmuramoyl-L-alanine amidase Amet_4375 PF09992 Predicted periplasmic protein (DUF2233) Amet_4376 PF06725 3D domain Amet_4384 PF04542 Sigma-70 region 2 Amet_4384 PF13384 Homeodomain-like domain Amet_4387 PF06252 Amet_4387 Amet_4389 PF04014 Antidote-toxin recognition MazE Amet_4393 PF13401 AAA domain Amet_4396 PF09299 Mu transposase, C-terminal Amet_4400 PF01381 Helix-turn-helix Amet_4400 PF12844 Helix-turn-helix domain Amet_4401 PF01609 Transposase DDE domain Amet_4402 PF01814 Hemerythrin HHE cation binding domain Amet_4402 PF04405 Amet_4402 Amet_4403 PF03819 MazG nucleotide pyrophosphohydrolase domain Amet_4404 PF00999 Sodium/hydrogen exchanger family Amet_4405 PF00733 Asparagine synthase Amet_4405 PF13537 Glutamine amidotransferase domain Amet_4406 PF00571 CBS domain Amet_4406 PF01595 Amet_4406 Amet_4406 PF03471 Transporter associated domain Amet_4407 PF00512 His Kinase A (phospho-acceptor) domain Amet_4407 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_4407 PF08447 PAS fold Amet_4407 PF13188 PAS domain Amet_4408 PF01471 Putative peptidoglycan binding domain Amet_4408 PF03734 L,D-transpeptidase catalytic domain Amet_4411 PF00512 His Kinase A (phospho-acceptor) domain Amet_4411 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_4411 PF02743 Cache domain Amet_4414 PF07833 Copper amine oxidase N-terminal domain Amet_4415 PF02386 Cation transport protein Amet_4416 PF02080 TrkA-C domain Amet_4416 PF02254 TrkA-N domain Amet_4418 PF11553 Protein of unknown function (DUF3231) Amet_4419 PF04199 Putative cyclase Amet_4420 PF00990 GGDEF domain Amet_4420 PF07695 Amet_4420 Amet_4421 PF04454 Encapsulating protein for peroxidase Amet_4423 PF06445 GyrI-like small molecule binding domain Amet_4423 PF13411 MerR HTH family regulatory protein Amet_4424 PF00491 Arginase family Amet_4425 PF04055 Radical SAM superfamily Amet_4426 PF03099 Biotin/lipoate A/B protein ligase family Amet_4427 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amet_4428 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amet_4429 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amet_4429 PF17147 Amet_4429 Amet_4430 PF12838 4Fe-4S dicluster domain Amet_4431 PF00871 Acetokinase family Amet_4432 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Amet_4432 PF03466 LysR substrate binding domain Amet_4433 PF00512 His Kinase A (phospho-acceptor) domain Amet_4433 PF00989 PAS fold Amet_4433 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_4433 PF13426 PAS domain Amet_4435 PF14489 QueF-like protein Amet_4436 PF06177 Amet_4436 Amet_4437 PF02915 Rubrerythrin Amet_4438 PF04748 Divergent polysaccharide deacetylase Amet_4439 PF04020 Amet_4439 Amet_4440 PF01520 N-acetylmuramoyl-L-alanine amidase Amet_4442 PF00380 Ribosomal protein S9/S16 Amet_4443 PF00572 Ribosomal protein L13 Amet_4444 PF01416 tRNA pseudouridine synthase Amet_4445 PF02361 Cobalt transport protein Amet_4446 PF00005 ABC transporter Amet_4447 PF00005 ABC transporter Amet_4448 PF01196 Ribosomal protein L17 Amet_4449 PF01000 RNA polymerase Rpb3/RpoA insert domain Amet_4449 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Amet_4449 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Amet_4450 PF00163 Ribosomal protein S4/S9 N-terminal domain Amet_4450 PF01479 S4 domain Amet_4451 PF00411 Ribosomal protein S11 Amet_4452 PF00416 Ribosomal protein S13/S18 Amet_4453 PF00444 Ribosomal protein L36 Amet_4454 PF01176 Translation initiation factor 1A / IF-1 Amet_4456 PF00557 Metallopeptidase family M24 Amet_4457 PF00406 Adenylate kinase Amet_4457 PF05191 Adenylate kinase, active site lid Amet_4458 PF00344 SecY translocase Amet_4459 PF00828 Ribosomal protein L18e/L15 Amet_4460 PF00327 Ribosomal protein L30p/L7e Amet_4461 PF00333 Ribosomal protein S5, N-terminal domain Amet_4461 PF03719 Ribosomal protein S5, C-terminal domain Amet_4462 PF00861 Ribosomal L18p/L5e family Amet_4463 PF00347 Ribosomal protein L6 Amet_4464 PF00410 Ribosomal protein S8 Amet_4465 PF00253 Ribosomal protein S14p/S29e Amet_4466 PF00281 Ribosomal protein L5 Amet_4466 PF00673 ribosomal L5P family C-terminus Amet_4467 PF00467 KOW motif Amet_4467 PF17136 Amet_4467 Amet_4468 PF00238 Ribosomal protein L14p/L23e Amet_4469 PF00366 Ribosomal protein S17 Amet_4470 PF00831 Ribosomal L29 protein Amet_4471 PF00252 Ribosomal protein L16p/L10e Amet_4472 PF00189 Ribosomal protein S3, C-terminal domain Amet_4472 PF07650 KH domain Amet_4473 PF00237 Ribosomal protein L22p/L17e Amet_4474 PF00203 Ribosomal protein S19 Amet_4475 PF00181 Ribosomal Proteins L2, RNA binding domain Amet_4475 PF03947 Ribosomal Proteins L2, C-terminal domain Amet_4476 PF00276 Ribosomal protein L23 Amet_4477 PF00573 Ribosomal protein L4/L1 family Amet_4478 PF00297 Ribosomal protein L3 Amet_4479 PF00338 Ribosomal protein S10p/S20e Amet_4480 PF00009 Elongation factor Tu GTP binding domain Amet_4480 PF03143 Elongation factor Tu C-terminal domain Amet_4480 PF03144 Elongation factor Tu domain 2 Amet_4481 PF00009 Elongation factor Tu GTP binding domain Amet_4481 PF00679 Elongation factor G C-terminus Amet_4481 PF03144 Elongation factor Tu domain 2 Amet_4481 PF03764 Elongation factor G, domain IV Amet_4481 PF14492 Elongation Factor G, domain II Amet_4482 PF00177 Ribosomal protein S7p/S5e Amet_4483 PF00164 Ribosomal protein S12/S23 Amet_4484 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Amet_4485 PF00623 RNA polymerase Rpb1, domain 2 Amet_4485 PF04983 RNA polymerase Rpb1, domain 3 Amet_4485 PF04997 RNA polymerase Rpb1, domain 1 Amet_4485 PF04998 RNA polymerase Rpb1, domain 5 Amet_4485 PF05000 RNA polymerase Rpb1, domain 4 Amet_4486 PF00562 RNA polymerase Rpb2, domain 6 Amet_4486 PF04560 RNA polymerase Rpb2, domain 7 Amet_4486 PF04561 RNA polymerase Rpb2, domain 2 Amet_4486 PF04563 RNA polymerase beta subunit Amet_4486 PF04565 RNA polymerase Rpb2, domain 3 Amet_4486 PF10385 RNA polymerase beta subunit external 1 domain Amet_4487 PF00542 Ribosomal protein L7/L12 C-terminal domain Amet_4487 PF16320 Amet_4487 Amet_4488 PF00466 Ribosomal protein L10 Amet_4489 PF00687 Ribosomal protein L1p/L10e family Amet_4490 PF00298 Ribosomal protein L11, RNA binding domain Amet_4490 PF03946 Ribosomal protein L11, N-terminal domain Amet_4491 PF02357 Transcription termination factor nusG Amet_4492 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Amet_4493 PF00471 Ribosomal protein L33 Amet_4494 PF00009 Elongation factor Tu GTP binding domain Amet_4494 PF03143 Elongation factor Tu C-terminal domain Amet_4494 PF03144 Elongation factor Tu domain 2 Amet_4495 PF04542 Sigma-70 region 2 Amet_4495 PF08281 Sigma-70, region 4 Amet_4496 PF05991 Amet_4496 Amet_4497 PF00588 SpoU rRNA Methylase family Amet_4497 PF08032 RNA 2'-O ribose methyltransferase substrate binding Amet_4498 PF02511 Thymidylate synthase complementing protein Amet_4500 PF00636 Ribonuclease III domain Amet_4501 PF01406 tRNA synthetases class I (C) catalytic domain Amet_4501 PF09190 DALR domain Amet_4502 PF00132 Bacterial transferase hexapeptide (six repeats) Amet_4502 PF06426 Serine acetyltransferase, N-terminal Amet_4503 PF00749 tRNA synthetases class I (E and Q), catalytic domain Amet_4504 PF06207 Amet_4504 Amet_4505 PF02542 YgbB family Amet_4506 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Amet_4507 PF13638 PIN domain Amet_4508 PF02559 CarD-like/TRCF domain Amet_4510 PF02457 DisA bacterial checkpoint controller nucleotide-binding Amet_4510 PF10635 DisA bacterial checkpoint controller linker region Amet_4510 PF12826 Helix-hairpin-helix motif Amet_4511 PF13481 AAA domain Amet_4511 PF13541 Subunit ChlI of Mg-chelatase Amet_4512 PF00004 ATPase family associated with various cellular activities (AAA) Amet_4512 PF02151 UvrB/uvrC motif Amet_4512 PF02861 Clp amino terminal domain Amet_4512 PF07724 AAA domain (Cdc48 subfamily) Amet_4512 PF10431 C-terminal, D2-small domain, of ClpB protein Amet_4513 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain Amet_4514 PF02151 UvrB/uvrC motif Amet_4515 PF00009 Elongation factor Tu GTP binding domain Amet_4515 PF00679 Elongation factor G C-terminus Amet_4515 PF03144 Elongation factor Tu domain 2 Amet_4515 PF03764 Elongation factor G, domain IV Amet_4515 PF14492 Elongation Factor G, domain II Amet_4516 PF00155 Aminotransferase class I and II Amet_4517 PF00080 Copper/zinc superoxide dismutase (SODC) Amet_4519 PF00654 Voltage gated chloride channel Amet_4520 PF02867 Ribonucleotide reductase, barrel domain Amet_4520 PF03477 ATP cone domain Amet_4521 PF13200 Amet_4521 Amet_4522 PF14595 Thioredoxin Amet_4523 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Amet_4523 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Amet_4524 PF00152 tRNA synthetases class II (D, K and N) Amet_4524 PF01336 OB-fold nucleic acid binding domain Amet_4525 PF01272 Transcription elongation factor, GreA/GreB, C-term Amet_4525 PF03449 Transcription elongation factor, N-terminal Amet_4527 PF01207 Dihydrouridine synthase (Dus) Amet_4528 PF03309 Type III pantothenate kinase Amet_4529 PF12822 Protein of unknown function (DUF3816) Amet_4530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_4531 PF02447 Amet_4531 Amet_4532 PF01144 Coenzyme A transferase Amet_4533 PF00158 Sigma-54 interaction domain Amet_4533 PF02954 Bacterial regulatory protein, Fis family Amet_4534 PF02237 Biotin protein ligase C terminal domain Amet_4534 PF03099 Biotin/lipoate A/B protein ligase family Amet_4534 PF08279 HTH domain Amet_4535 PF03977 Amet_4535 Amet_4536 PF00364 Biotin-requiring enzyme Amet_4537 PF04277 Amet_4537 Amet_4538 PF01039 Carboxyl transferase domain Amet_4539 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Amet_4540 PF03308 ArgK protein Amet_4541 PF02310 B12 binding domain Amet_4542 PF01642 Methylmalonyl-CoA mutase Amet_4543 PF00004 ATPase family associated with various cellular activities (AAA) Amet_4543 PF01434 Peptidase family M41 Amet_4544 PF01171 PP-loop family Amet_4544 PF11734 TilS substrate C-terminal domain Amet_4545 PF00069 Protein kinase domain Amet_4546 PF00092 von Willebrand factor type A domain Amet_4546 PF13519 von Willebrand factor type A domain Amet_4548 PF02310 B12 binding domain Amet_4548 PF16554 Amet_4548 Amet_4549 PF09043 D-Lysine 5,6-aminomutase alpha subunit Amet_4550 PF00488 MutS domain V Amet_4552 PF04055 Radical SAM superfamily Amet_4552 PF12544 Lysine-2,3-aminomutase Amet_4554 PF00158 Sigma-54 interaction domain Amet_4554 PF02954 Bacterial regulatory protein, Fis family Amet_4554 PF08448 PAS fold Amet_4555 PF01170 Putative RNA methylase family UPF0020 Amet_4555 PF02926 THUMP domain Amet_4558 PF00149 Calcineurin-like phosphoesterase Amet_4560 PF03063 Prismane/CO dehydrogenase family Amet_4561 PF17099 Amet_4561 Amet_4562 PF00155 Aminotransferase class I and II Amet_4564 PF02625 XdhC and CoxI family Amet_4564 PF13478 XdhC Rossmann domain Amet_4565 PF12804 MobA-like NTP transferase domain Amet_4567 PF01979 Amidohydrolase family Amet_4567 PF13382 Adenine deaminase C-terminal domain Amet_4568 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Amet_4569 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Amet_4569 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Amet_4570 PF00111 2Fe-2S iron-sulfur cluster binding domain Amet_4570 PF01799 [2Fe-2S] binding domain Amet_4571 PF00941 FAD binding domain in molybdopterin dehydrogenase Amet_4571 PF03450 CO dehydrogenase flavoprotein C-terminal domain Amet_4572 PF01979 Amidohydrolase family Amet_4573 PF00860 Permease family Amet_4574 PF01979 Amidohydrolase family Amet_4574 PF13382 Adenine deaminase C-terminal domain Amet_4575 PF03319 Ethanolamine utilisation protein EutN/carboxysome Amet_4577 PF00936 BMC domain Amet_4578 PF00936 BMC domain Amet_4580 PF00936 BMC domain Amet_4581 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Amet_4582 PF02441 Flavoprotein Amet_4583 PF00857 Isochorismatase family Amet_4584 PF01979 Amidohydrolase family Amet_4585 PF01268 Formate--tetrahydrofolate ligase Amet_4586 PF02971 Formiminotransferase domain Amet_4586 PF07837 Formiminotransferase domain, N-terminal subdomain Amet_4587 PF04199 Putative cyclase Amet_4588 PF07905 Amet_4588 Amet_4588 PF13556 PucR C-terminal helix-turn-helix domain Amet_4589 PF04961 Formiminotransferase-cyclodeaminase Amet_4590 PF09148 Domain of unknown function (DUF1934) Amet_4591 PF01820 D-ala D-ala ligase N-terminus Amet_4591 PF07478 D-ala D-ala ligase C-terminus Amet_4592 PF09551 Amet_4592 Amet_4594 PF11553 Protein of unknown function (DUF3231) Amet_4597 PF03845 Amet_4597 Amet_4598 PF03845 Amet_4598 Amet_4599 PF05504 Spore germination B3/ GerAC like, C-terminal Amet_4600 PF03323 Amet_4600 Amet_4602 PF12804 MobA-like NTP transferase domain Amet_4603 PF00392 Bacterial regulatory proteins, gntR family Amet_4603 PF07729 FCD domain Amet_4604 PF00288 GHMP kinases N terminal domain Amet_4604 PF08544 GHMP kinases C terminal Amet_4605 PF01476 LysM domain Amet_4605 PF12673 Amet_4605 Amet_4606 PF00395 S-layer homology domain Amet_4607 PF00696 Amino acid kinase family Amet_4608 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Amet_4608 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Amet_4609 PF02274 Amidinotransferase Amet_4610 PF06257 Protein of unknown function (DUF1021) Amet_4611 PF01520 N-acetylmuramoyl-L-alanine amidase Amet_4611 PF08486 Amet_4611 Amet_4612 PF01047 MarR family Amet_4616 PF00883 Cytosol aminopeptidase family, catalytic domain Amet_4616 PF02789 Cytosol aminopeptidase family, N-terminal domain Amet_4617 PF03553 Amet_4617 Amet_4619 PF04205 FMN-binding domain Amet_4620 PF01895 PhoU domain Amet_4621 PF00005 ABC transporter Amet_4622 PF00528 Binding-protein-dependent transport system inner membrane component Amet_4623 PF00528 Binding-protein-dependent transport system inner membrane component Amet_4624 PF12849 PBP superfamily domain Amet_4625 PF12706 Beta-lactamase superfamily domain Amet_4626 PF00892 EamA-like transporter family Amet_4627 PF00005 ABC transporter Amet_4627 PF08402 TOBE domain Amet_4628 PF00528 Binding-protein-dependent transport system inner membrane component Amet_4629 PF13343 Bacterial extracellular solute-binding protein Amet_4630 PF00108 Thiolase, N-terminal domain Amet_4630 PF02803 Thiolase, C-terminal domain Amet_4631 PF13561 Enoyl-(Acyl carrier protein) reductase Amet_4632 PF01594 Amet_4632 Amet_4633 PF04239 Protein of unknown function (DUF421) Amet_4634 PF01416 tRNA pseudouridine synthase Amet_4635 PF14403 Amet_4635 Amet_4636 PF04107 Glutamate-cysteine ligase family 2(GCS2) Amet_4638 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_4638 PF00672 HAMP domain Amet_4638 PF02743 Cache domain Amet_4639 PF14512 Putative TM nitroreductase Amet_4641 PF00149 Calcineurin-like phosphoesterase Amet_4642 PF02597 ThiS family Amet_4643 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Amet_4643 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Amet_4644 PF00158 Sigma-54 interaction domain Amet_4644 PF00989 PAS fold Amet_4644 PF01590 GAF domain Amet_4644 PF02954 Bacterial regulatory protein, Fis family Amet_4645 PF04389 Peptidase family M28 Amet_4646 PF00384 Molybdopterin oxidoreductase Amet_4646 PF01568 Molydopterin dinucleotide binding domain Amet_4646 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Amet_4648 PF00456 Transketolase, thiamine diphosphate binding domain Amet_4648 PF02779 Transketolase, pyrimidine binding domain Amet_4648 PF02780 Transketolase, C-terminal domain Amet_4649 PF08761 dUTPase Amet_4650 PF02810 SEC-C motif Amet_4651 PF01554 MatE Amet_4652 PF09515 Thiamine transporter protein (Thia_YuaJ) Amet_4653 PF01880 Desulfoferrodoxin Amet_4655 PF13091 PLD-like domain Amet_4655 PF13396 Amet_4655 Amet_4656 PF01734 Patatin-like phospholipase Amet_4657 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amet_4657 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amet_4657 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amet_4657 PF10371 Domain of unknown function Amet_4657 PF13484 Amet_4657 Amet_4657 PF17147 Amet_4657 Amet_4658 PF00005 ABC transporter Amet_4658 PF00664 ABC transporter transmembrane region Amet_4659 PF11155 Domain of unknown function (DUF2935) Amet_4660 PF03590 Aspartate-ammonia ligase Amet_4661 PF01814 Hemerythrin HHE cation binding domain Amet_4663 PF00355 Rieske [2Fe-2S] domain Amet_4663 PF01266 FAD dependent oxidoreductase Amet_4664 PF04308 Amet_4664 Amet_4665 PF03313 Amet_4665 Amet_4666 PF00158 Sigma-54 interaction domain Amet_4666 PF00989 PAS fold Amet_4666 PF02954 Bacterial regulatory protein, Fis family Amet_4667 PF03060 Nitronate monooxygenase Amet_4668 PF12698 ABC-2 family transporter protein Amet_4669 PF12698 ABC-2 family transporter protein Amet_4670 PF00005 ABC transporter Amet_4671 PF00440 Bacterial regulatory proteins, tetR family Amet_4672 PF00488 MutS domain V Amet_4672 PF05192 MutS domain III Amet_4675 PF12833 Helix-turn-helix domain Amet_4679 PF09851 Amet_4679 Amet_4683 PF04542 Sigma-70 region 2 Amet_4683 PF08281 Sigma-70, region 4 Amet_4684 PF00665 Integrase core domain Amet_4685 PF01695 IstB-like ATP binding protein Amet_4687 PF07833 Copper amine oxidase N-terminal domain Amet_4693 PF04542 Sigma-70 region 2 Amet_4693 PF08281 Sigma-70, region 4 Amet_4695 PF00270 DEAD/DEAH box helicase Amet_4695 PF00271 Helicase conserved C-terminal domain Amet_4695 PF00570 HRDC domain Amet_4695 PF09382 RQC domain Amet_4695 PF14493 Amet_4695 Amet_4695 PF16124 Amet_4695 Amet_4696 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Amet_4698 PF00849 RNA pseudouridylate synthase Amet_4698 PF01479 S4 domain Amet_4699 PF00270 DEAD/DEAH box helicase Amet_4699 PF00271 Helicase conserved C-terminal domain Amet_4701 PF03746 LamB/YcsF family Amet_4702 PF14336 Domain of unknown function (DUF4392) Amet_4703 PF16868 Amet_4703 Amet_4704 PF08905 Amet_4704 Amet_4705 PF06808 Amet_4705 Amet_4705 PF11874 Amet_4705 Amet_4708 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Amet_4708 PF03466 LysR substrate binding domain Amet_4709 PF04143 Amet_4709 Amet_4710 PF01206 Sulfurtransferase TusA Amet_4711 PF04143 Amet_4711 Amet_4713 PF01996 F420-0:Gamma-glutamyl ligase Amet_4714 PF00892 EamA-like transporter family Amet_4715 PF07155 ECF-type riboflavin transporter, S component Amet_4717 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Amet_4717 PF02743 Cache domain Amet_4718 PF00005 ABC transporter Amet_4719 PF00005 ABC transporter Amet_4720 PF00528 Binding-protein-dependent transport system inner membrane component Amet_4720 PF12911 Amet_4720 Amet_4721 PF00528 Binding-protein-dependent transport system inner membrane component Amet_4722 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amet_4723 PF07690 Major Facilitator Superfamily Amet_4724 PF01569 PAP2 superfamily Amet_4725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Amet_4726 PF00583 Acetyltransferase (GNAT) family Amet_4727 PF00155 Aminotransferase class I and II Amet_4727 PF00392 Bacterial regulatory proteins, gntR family Amet_4728 PF00892 EamA-like transporter family Amet_4729 PF00072 Response regulator receiver domain Amet_4729 PF00486 Transcriptional regulatory protein, C terminal Amet_4730 PF00512 His Kinase A (phospho-acceptor) domain Amet_4730 PF00672 HAMP domain Amet_4730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_4732 PF01527 Transposase Amet_4735 PF05569 BlaR1 peptidase M56 Amet_4736 PF03965 Penicillinase repressor Amet_4738 PF00005 ABC transporter Amet_4738 PF08402 TOBE domain Amet_4739 PF13416 Bacterial extracellular solute-binding protein Amet_4740 PF12704 MacB-like periplasmic core domain Amet_4741 PF13533 Biotin-lipoyl like Amet_4741 PF16576 Amet_4741 Amet_4742 PF00528 Binding-protein-dependent transport system inner membrane component Amet_4743 PF00528 Binding-protein-dependent transport system inner membrane component Amet_4744 PF00005 ABC transporter Amet_4745 PF02687 Amet_4745 Amet_4745 PF12704 MacB-like periplasmic core domain Amet_4746 PF00512 His Kinase A (phospho-acceptor) domain Amet_4746 PF00672 HAMP domain Amet_4746 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_4747 PF00072 Response regulator receiver domain Amet_4747 PF00486 Transcriptional regulatory protein, C terminal Amet_4749 PF02590 Predicted SPOUT methyltransferase Amet_4750 PF14116 Amet_4750 Amet_4751 PF13180 PDZ domain Amet_4751 PF13365 Trypsin-like peptidase domain Amet_4752 PF12706 Beta-lactamase superfamily domain Amet_4753 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Amet_4754 PF09648 YycH protein Amet_4755 PF07435 YycH protein Amet_4757 PF00512 His Kinase A (phospho-acceptor) domain Amet_4757 PF00672 HAMP domain Amet_4757 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amet_4757 PF13426 PAS domain Amet_4758 PF00072 Response regulator receiver domain Amet_4758 PF00486 Transcriptional regulatory protein, C terminal Amet_4759 PF13485 Peptidase MA superfamily Amet_4760 PF00082 Subtilase family Amet_4761 PF01476 LysM domain Amet_4761 PF01551 Peptidase family M23 Amet_4761 PF07501 G5 domain Amet_4762 PF01433 Peptidase family M1 Amet_4763 PF07261 Replication initiation and membrane attachment Amet_4764 PF01695 IstB-like ATP binding protein Amet_4765 PF00709 Adenylosuccinate synthetase Amet_4767 PF13302 Acetyltransferase (GNAT) domain Amet_4768 PF00772 DnaB-like helicase N terminal domain Amet_4768 PF03796 DnaB-like helicase C terminal domain Amet_4769 PF01281 Ribosomal protein L9, N-terminal domain Amet_4769 PF03948 Ribosomal protein L9, C-terminal domain Amet_4770 PF01368 DHH family Amet_4770 PF02272 DHHA1 domain Amet_4771 PF09991 Amet_4771 Amet_4772 PF12643 Amet_4772 Amet_4773 PF06081 Amet_4773 Amet_4774 PF07441 Amet_4774 Amet_4775 PF10704 Amet_4775 Amet_4776 PF02562 PhoH-like protein Amet_4776 PF13638 PIN domain Amet_4777 PF00999 Sodium/hydrogen exchanger family Amet_4779 PF02132 RecR protein Amet_4779 PF13662 Toprim domain Amet_4780 PF02575 YbaB/EbfC DNA-binding family Amet_4781 PF12169 DNA polymerase III subunits gamma and tau domain III Amet_4781 PF13177 DNA polymerase III, delta subunit Amet_4782 PF02674 Amet_4782 Amet_4785 PF06866 Amet_4785 Amet_4786 PF03698 Amet_4786 Amet_4787 PF00781 Diacylglycerol kinase catalytic domain Amet_4788 PF14584 Amet_4788 Amet_4789 PF00266 Aminotransferase class-V Amet_4790 PF02567 Phenazine biosynthesis-like protein Amet_4791 PF02195 ParB-like nuclease domain Amet_4792 PF13614 AAA domain Amet_4793 PF01169 Amet_4793 Amet_4794 PF02195 ParB-like nuclease domain Amet_4795 PF02527 rRNA small subunit methyltransferase G Amet_4796 PF01134 Glucose inhibited division protein A Amet_4796 PF13932 GidA associated domain 3 Amet_4797 PF01926 50S ribosome-binding GTPase Amet_4797 PF10396 GTP-binding protein TrmE N-terminus Amet_4797 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE Amet_4798 PF01424 R3H domain Amet_4798 PF13083 KH domain Amet_4798 PF14804 Jag N-terminus Amet_4799 PF02096 60Kd inner membrane protein Amet_4800 PF01809 Amet_4800 Amet_4801 PF00825 Ribonuclease P Amet_4802 PF00468 Ribosomal protein L34