Amet_0001 SM00382 ATPases associated with a variety of cellular activities Amet_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Amet_0002 SM00480 DNA polymerase III beta subunit Amet_0006 SM00387 Histidine kinase-like ATPases Amet_0006 SM00433 TopoisomeraseII Amet_0007 SM00434 DNA Topoisomerase IV Amet_0043 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_0050 SM00344 helix_turn_helix ASNC type Amet_0051 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_0052 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_0062 SM01004 Delta-aminolevulinic acid dehydratase Amet_0092 SM00966 SpoVT / AbrB like domain Amet_0093 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_0098 SM00793 Accessory gene regulator B Amet_0101 SM00382 ATPases associated with a variety of cellular activities Amet_0102 SM00387 Histidine kinase-like ATPases Amet_0103 SM00448 cheY-homologous receiver domain Amet_0103 SM00850 LytTr DNA-binding domain Amet_0114 SM01321 Amet_0114 Amet_0124 SM00793 Accessory gene regulator B Amet_0127 SM01321 Amet_0127 Amet_0129 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Amet_0132 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_0133 SM00382 ATPases associated with a variety of cellular activities Amet_0136 SM01208 Amet_0136 Amet_0137 SM00493 Amet_0137 Amet_0138 SM00650 Ribosomal RNA adenine dimethylases Amet_0141 SM00450 Rhodanese Homology Domain Amet_0157 SM01400 Amet_0157 Amet_0160 SM00487 DEAD-like helicases superfamily Amet_0160 SM00490 helicase superfamily c-terminal domain Amet_0160 SM00982 Amet_0160 Amet_0160 SM01058 CarD-like/TRCF domain Amet_0162 SM00966 SpoVT / AbrB like domain Amet_0165 SM00411 bacterial (prokaryotic) histone like domain Amet_0166 SM00363 S4 RNA-binding domain Amet_0172 SM00316 Ribosomal protein S1-like RNA-binding domain Amet_0173 SM00331 Sigma factor PP2C-like phosphatases Amet_0174 SM00530 Helix-turn-helix XRE-family like proteins Amet_0175 SM00530 Helix-turn-helix XRE-family like proteins Amet_0177 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Amet_0177 SM00245 tail specific protease Amet_0180 SM00060 Fibronectin type 3 domain Amet_0180 SM00429 ig-like, plexins, transcription factors Amet_0193 SM00028 Tetratricopeptide repeats Amet_0206 SM00984 UDP binding domain Amet_0216 SM01321 Amet_0216 Amet_0220 SM00382 ATPases associated with a variety of cellular activities Amet_0225 SM00091 PAS domain Amet_0225 SM00382 ATPases associated with a variety of cellular activities Amet_0229 SM01130 Amet_0229 Amet_0234 SM00382 ATPases associated with a variety of cellular activities Amet_0248 SM00448 cheY-homologous receiver domain Amet_0249 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_0249 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_0250 SM00877 Amet_0250 Amet_0252 SM00448 cheY-homologous receiver domain Amet_0252 SM01012 Amet_0252 Amet_0253 SM00387 Histidine kinase-like ATPases Amet_0253 SM00911 HWE histidine kinase Amet_0257 SM00877 Amet_0257 Amet_0258 SM00877 Amet_0258 Amet_0260 SM00877 Amet_0260 Amet_0263 SM00842 Cell division protein FtsA Amet_0267 SM00877 Amet_0267 Amet_0286 SM00028 Tetratricopeptide repeats Amet_0287 SM00028 Tetratricopeptide repeats Amet_0287 SM00271 DnaJ molecular chaperone homology domain Amet_0288 SM00448 cheY-homologous receiver domain Amet_0288 SM00862 Transcriptional regulatory protein, C terminal Amet_0289 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_0289 SM00387 Histidine kinase-like ATPases Amet_0289 SM00388 His Kinase A (phosphoacceptor) domain Amet_0299 SM00028 Tetratricopeptide repeats Amet_0316 SM00448 cheY-homologous receiver domain Amet_0323 SM00357 Cold shock protein domain Amet_0323 SM00382 ATPases associated with a variety of cellular activities Amet_0323 SM00959 Rho termination factor, N-terminal domain Amet_0326 SM00422 helix_turn_helix, mercury resistance Amet_0327 SM00900 Amet_0327 Amet_0331 SM00937 Amet_0331 Amet_0333 SM00240 Forkhead associated domain Amet_0337 SM00226 Low molecular weight phosphatase family Amet_0353 SM00382 ATPases associated with a variety of cellular activities Amet_0366 SM00382 ATPases associated with a variety of cellular activities Amet_0373 SM01321 Amet_0373 Amet_0381 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_0381 SM00895 Amet_0381 Amet_0383 SM00530 Helix-turn-helix XRE-family like proteins Amet_0393 SM00966 SpoVT / AbrB like domain Amet_0408 SM00646 Amet_0408 Amet_0414 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Amet_0442 SM00893 Electron transfer flavoprotein domain Amet_0443 SM00893 Electron transfer flavoprotein domain Amet_0452 SM00271 DnaJ molecular chaperone homology domain Amet_0455 SM00354 helix_turn _helix lactose operon repressor Amet_0457 SM00382 ATPases associated with a variety of cellular activities Amet_0467 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_0467 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_0470 SM01092 CO dehydrogenase flavoprotein C-terminal domain Amet_0472 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Amet_0475 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Amet_0478 SM00422 helix_turn_helix, mercury resistance Amet_0479 SM00900 Amet_0479 Amet_0480 SM01001 AIR carboxylase Amet_0485 SM00881 CoA binding domain Amet_0488 SM00387 Histidine kinase-like ATPases Amet_0489 SM00421 helix_turn_helix, Lux Regulon Amet_0489 SM00448 cheY-homologous receiver domain Amet_0500 SM00346 helix_turn_helix isocitrate lyase regulation Amet_0511 SM01060 Amet_0511 Amet_0515 SM00062 Bacterial periplasmic substrate-binding proteins Amet_0516 SM00382 ATPases associated with a variety of cellular activities Amet_0519 SM00382 ATPases associated with a variety of cellular activities Amet_0525 SM00382 ATPases associated with a variety of cellular activities Amet_0527 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_0531 SM00855 Phosphoglycerate mutase family Amet_0537 SM00849 Metallo-beta-lactamase superfamily Amet_0541 SM00257 Lysin motif Amet_0542 SM00257 Lysin motif Amet_0544 SM00342 helix_turn_helix, arabinose operon control protein Amet_0546 SM00448 cheY-homologous receiver domain Amet_0546 SM00862 Transcriptional regulatory protein, C terminal Amet_0547 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_0547 SM00387 Histidine kinase-like ATPases Amet_0547 SM00388 His Kinase A (phosphoacceptor) domain Amet_0549 SM00770 Zinc dependent phospholipase C (alpha toxin) Amet_0553 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_0553 SM00895 Amet_0553 Amet_0556 SM00858 Amet_0556 Amet_0579 SM00878 Biotin carboxylase C-terminal domain Amet_0582 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_0586 SM00354 helix_turn _helix lactose operon repressor Amet_0587 SM00382 ATPases associated with a variety of cellular activities Amet_0590 SM00829 Enoylreductase Amet_0594 SM00487 DEAD-like helicases superfamily Amet_0594 SM00490 helicase superfamily c-terminal domain Amet_0598 SM00382 ATPases associated with a variety of cellular activities Amet_0601 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_0602 SM00387 Histidine kinase-like ATPases Amet_0602 SM00388 His Kinase A (phosphoacceptor) domain Amet_0603 SM00448 cheY-homologous receiver domain Amet_0605 SM01092 CO dehydrogenase flavoprotein C-terminal domain Amet_0607 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Amet_0614 SM00448 cheY-homologous receiver domain Amet_0617 SM00422 helix_turn_helix, mercury resistance Amet_0618 SM00448 cheY-homologous receiver domain Amet_0618 SM00850 LytTr DNA-binding domain Amet_0620 SM00793 Accessory gene regulator B Amet_0640 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Amet_0641 SM00902 Iron hydrogenase small subunit Amet_0641 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Amet_0651 SM00830 Chorismate mutase type II Amet_0655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_0655 SM00387 Histidine kinase-like ATPases Amet_0655 SM00388 His Kinase A (phosphoacceptor) domain Amet_0656 SM00448 cheY-homologous receiver domain Amet_0656 SM00862 Transcriptional regulatory protein, C terminal Amet_0657 SM00116 Domain in cystathionine beta-synthase and other proteins. Amet_0659 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_0659 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_0663 SM00091 PAS domain Amet_0663 SM00116 Domain in cystathionine beta-synthase and other proteins. Amet_0663 SM00382 ATPases associated with a variety of cellular activities Amet_0675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_0680 SM00829 Enoylreductase Amet_0681 SM01092 CO dehydrogenase flavoprotein C-terminal domain Amet_0683 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Amet_0699 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Amet_0700 SM00382 ATPases associated with a variety of cellular activities Amet_0704 SM00387 Histidine kinase-like ATPases Amet_0706 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_0708 SM00448 cheY-homologous receiver domain Amet_0708 SM00862 Transcriptional regulatory protein, C terminal Amet_0709 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_0709 SM00387 Histidine kinase-like ATPases Amet_0709 SM00388 His Kinase A (phosphoacceptor) domain Amet_0710 SM00909 Sporulation and spore germination Amet_0718 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_0718 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_0722 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Amet_0722 SM00382 ATPases associated with a variety of cellular activities Amet_0733 SM00028 Tetratricopeptide repeats Amet_0748 SM01321 Amet_0748 Amet_0752 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_0753 SM00530 Helix-turn-helix XRE-family like proteins Amet_0756 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Amet_0759 SM00900 Amet_0759 Amet_0763 SM00342 helix_turn_helix, arabinose operon control protein Amet_0765 SM00893 Electron transfer flavoprotein domain Amet_0766 SM00893 Electron transfer flavoprotein domain Amet_0772 SM01091 Transporter associated domain Amet_0777 SM00849 Metallo-beta-lactamase superfamily Amet_0777 SM01027 Beta-Casp domain Amet_0790 SM00957 SecA DEAD-like domain Amet_0790 SM00958 SecA preprotein cross-linking domain Amet_0791 SM00937 Amet_0791 Amet_0799 SM00316 Ribosomal protein S1-like RNA-binding domain Amet_0799 SM00732 Likely ribonuclease with RNase H fold. Amet_0810 SM00382 ATPases associated with a variety of cellular activities Amet_0811 SM00881 CoA binding domain Amet_0812 SM00347 helix_turn_helix multiple antibiotic resistance protein Amet_0815 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Amet_0818 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_0818 SM00895 Amet_0818 Amet_0819 SM00893 Electron transfer flavoprotein domain Amet_0820 SM00893 Electron transfer flavoprotein domain Amet_0823 SM00382 ATPases associated with a variety of cellular activities Amet_0825 SM00420 helix_turn_helix, Deoxyribose operon repressor Amet_0825 SM01134 Amet_0825 Amet_0831 SM00478 endonuclease III Amet_0833 SM00883 Chaperonin 10 Kd subunit Amet_0838 SM00530 Helix-turn-helix XRE-family like proteins Amet_0841 SM01040 BRO family, N-terminal domain Amet_0847 SM00487 DEAD-like helicases superfamily Amet_0847 SM00490 helicase superfamily c-terminal domain Amet_0855 SM00530 Helix-turn-helix XRE-family like proteins Amet_0886 SM00530 Helix-turn-helix XRE-family like proteins Amet_0888 SM00342 helix_turn_helix, arabinose operon control protein Amet_0894 SM00382 ATPases associated with a variety of cellular activities Amet_0899 SM00710 Parallel beta-helix repeats Amet_0902 SM00354 helix_turn _helix lactose operon repressor Amet_0909 SM00116 Domain in cystathionine beta-synthase and other proteins. Amet_0909 SM01240 Amet_0909 Amet_0917 SM01001 AIR carboxylase Amet_0920 SM01211 Amet_0920 Amet_0925 SM00798 AICARFT/IMPCHase bienzyme Amet_0925 SM00851 MGS-like domain Amet_0926 SM01209 Amet_0926 Amet_0926 SM01210 Amet_0926 Amet_0929 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_0932 SM00382 ATPases associated with a variety of cellular activities Amet_0938 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Amet_0938 SM00091 PAS domain Amet_0938 SM00267 diguanylate cyclase Amet_0938 SM00448 cheY-homologous receiver domain Amet_0940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_0940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_0942 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Amet_0942 SM00292 breast cancer carboxy-terminal domain Amet_0942 SM00532 Ligase N family Amet_0946 SM00899 Amet_0946 Amet_0953 SM00646 Amet_0953 Amet_0955 SM00909 Sporulation and spore germination Amet_0965 SM01321 Amet_0965 Amet_0967 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Amet_0967 SM00091 PAS domain Amet_0967 SM00267 diguanylate cyclase Amet_0967 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_0967 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_0981 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Amet_0983 SM00226 Low molecular weight phosphatase family Amet_0988 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_0990 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Amet_0995 SM00852 Probable molybdopterin binding domain Amet_0996 SM00852 Probable molybdopterin binding domain Amet_1001 SM00316 Ribosomal protein S1-like RNA-binding domain Amet_1001 SM00322 K homology RNA-binding domain Amet_1006 SM00316 Ribosomal protein S1-like RNA-binding domain Amet_1006 SM00322 K homology RNA-binding domain Amet_1012 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Amet_1012 SM00091 PAS domain Amet_1012 SM00387 Histidine kinase-like ATPases Amet_1012 SM00388 His Kinase A (phosphoacceptor) domain Amet_1013 SM00387 Histidine kinase-like ATPases Amet_1013 SM00388 His Kinase A (phosphoacceptor) domain Amet_1013 SM00448 cheY-homologous receiver domain Amet_1014 SM00448 cheY-homologous receiver domain Amet_1014 SM00862 Transcriptional regulatory protein, C terminal Amet_1024 SM00382 ATPases associated with a variety of cellular activities Amet_1026 SM00116 Domain in cystathionine beta-synthase and other proteins. Amet_1030 SM00331 Sigma factor PP2C-like phosphatases Amet_1032 SM00382 ATPases associated with a variety of cellular activities Amet_1039 SM00028 Tetratricopeptide repeats Amet_1039 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_1040 SM00421 helix_turn_helix, Lux Regulon Amet_1045 SM00382 ATPases associated with a variety of cellular activities Amet_1056 SM00857 Resolvase, N terminal domain Amet_1059 SM01264 Amet_1059 Amet_1060 SM00421 helix_turn_helix, Lux Regulon Amet_1065 SM00354 helix_turn _helix lactose operon repressor Amet_1068 SM00382 ATPases associated with a variety of cellular activities Amet_1068 SM00994 ClpX C4-type zinc finger Amet_1068 SM01086 C-terminal, D2-small domain, of ClpB protein Amet_1071 SM00382 ATPases associated with a variety of cellular activities Amet_1072 SM00382 ATPases associated with a variety of cellular activities Amet_1072 SM00464 Found in ATP-dependent protease La (LON) Amet_1089 SM00636 Amet_1089 Amet_1090 SM00028 Tetratricopeptide repeats Amet_1099 SM00448 cheY-homologous receiver domain Amet_1099 SM00862 Transcriptional regulatory protein, C terminal Amet_1100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_1100 SM00387 Histidine kinase-like ATPases Amet_1100 SM00388 His Kinase A (phosphoacceptor) domain Amet_1110 SM00347 helix_turn_helix multiple antibiotic resistance protein Amet_1120 SM00382 ATPases associated with a variety of cellular activities Amet_1121 SM00382 ATPases associated with a variety of cellular activities Amet_1124 SM01078 Amet_1124 Amet_1126 SM00419 helix_turn_helix, cAMP Regulatory protein Amet_1128 SM00382 ATPases associated with a variety of cellular activities Amet_1134 SM00382 ATPases associated with a variety of cellular activities Amet_1135 SM00382 ATPases associated with a variety of cellular activities Amet_1137 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_1138 SM00342 helix_turn_helix, arabinose operon control protein Amet_1138 SM00448 cheY-homologous receiver domain Amet_1141 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Amet_1141 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Amet_1141 SM00493 Amet_1141 Amet_1150 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_1150 SM00866 Amet_1150 Amet_1156 SM00382 ATPases associated with a variety of cellular activities Amet_1158 SM00382 ATPases associated with a variety of cellular activities Amet_1162 SM00382 ATPases associated with a variety of cellular activities Amet_1165 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Amet_1165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_1167 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Amet_1167 SM00267 diguanylate cyclase Amet_1168 SM00155 Phospholipase D. Active site motifs. Amet_1173 SM00382 ATPases associated with a variety of cellular activities Amet_1180 SM00100 Cyclic nucleotide-monophosphate binding domain Amet_1180 SM00419 helix_turn_helix, cAMP Regulatory protein Amet_1187 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_1191 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Amet_1193 SM00346 helix_turn_helix isocitrate lyase regulation Amet_1220 SM00316 Ribosomal protein S1-like RNA-binding domain Amet_1229 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Amet_1239 SM00900 Amet_1239 Amet_1240 SM00382 ATPases associated with a variety of cellular activities Amet_1242 SM00062 Bacterial periplasmic substrate-binding proteins Amet_1252 SM00861 Transketolase, pyrimidine binding domain Amet_1255 SM00331 Sigma factor PP2C-like phosphatases Amet_1256 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Amet_1256 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_1256 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_1257 SM01061 CAT RNA binding domain Amet_1260 SM00346 helix_turn_helix isocitrate lyase regulation Amet_1263 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_1263 SM00895 Amet_1263 Amet_1264 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_1264 SM00895 Amet_1264 Amet_1269 SM01230 Amet_1269 Amet_1274 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_1275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Amet_1275 SM00387 Histidine kinase-like ATPases Amet_1275 SM00388 His Kinase A (phosphoacceptor) domain Amet_1278 SM00387 Histidine kinase-like ATPases Amet_1278 SM00388 His Kinase A (phosphoacceptor) domain Amet_1281 SM00793 Accessory gene regulator B Amet_1286 SM00857 Resolvase, N terminal domain Amet_1294 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_1294 SM00895 Amet_1294 Amet_1295 SM00382 ATPases associated with a variety of cellular activities Amet_1296 SM00357 Cold shock protein domain Amet_1297 SM00986 Uracil DNA glycosylase superfamily Amet_1297 SM00987 UreE urease accessory protein, C-terminal domain Amet_1298 SM00849 Metallo-beta-lactamase superfamily Amet_1302 SM01230 Amet_1302 Amet_1303 SM00448 cheY-homologous receiver domain Amet_1304 SM00919 Malic enzyme, NAD binding domain Amet_1304 SM01274 Amet_1304 Amet_1305 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_1319 SM01329 Amet_1319 Amet_1323 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_1324 SM00382 ATPases associated with a variety of cellular activities Amet_1326 SM00382 ATPases associated with a variety of cellular activities Amet_1330 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Amet_1343 SM01091 Transporter associated domain Amet_1352 SM00854 Bacterial capsule synthesis protein PGA_cap Amet_1366 SM00116 Domain in cystathionine beta-synthase and other proteins. Amet_1366 SM00924 MgtE intracellular N domain Amet_1377 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Amet_1378 SM00448 cheY-homologous receiver domain Amet_1378 SM00850 LytTr DNA-binding domain Amet_1384 SM00900 Amet_1384 Amet_1388 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_1394 SM00900 Amet_1394 Amet_1395 SM00422 helix_turn_helix, mercury resistance Amet_1410 SM00857 Resolvase, N terminal domain Amet_1418 SM00849 Metallo-beta-lactamase superfamily Amet_1428 SM00342 helix_turn_helix, arabinose operon control protein Amet_1442 SM00563 Phosphate acyltransferases Amet_1448 SM00052 Putative diguanylate phosphodiesterase Amet_1448 SM00091 PAS domain Amet_1448 SM00267 diguanylate cyclase Amet_1449 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_1449 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_1451 SM00382 ATPases associated with a variety of cellular activities Amet_1457 SM00448 cheY-homologous receiver domain Amet_1457 SM00862 Transcriptional regulatory protein, C terminal Amet_1458 SM00387 Histidine kinase-like ATPases Amet_1459 SM00382 ATPases associated with a variety of cellular activities Amet_1472 SM00382 ATPases associated with a variety of cellular activities Amet_1479 SM00347 helix_turn_helix multiple antibiotic resistance protein Amet_1481 SM00382 ATPases associated with a variety of cellular activities Amet_1486 SM00646 Amet_1486 Amet_1501 SM00382 ATPases associated with a variety of cellular activities Amet_1504 SM00342 helix_turn_helix, arabinose operon control protein Amet_1504 SM00871 Bacterial transcription activator, effector binding domain Amet_1506 SM00448 cheY-homologous receiver domain Amet_1506 SM00862 Transcriptional regulatory protein, C terminal Amet_1507 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_1507 SM00387 Histidine kinase-like ATPases Amet_1507 SM00388 His Kinase A (phosphoacceptor) domain Amet_1510 SM00881 CoA binding domain Amet_1515 SM00382 ATPases associated with a variety of cellular activities Amet_1518 SM00448 cheY-homologous receiver domain Amet_1518 SM00862 Transcriptional regulatory protein, C terminal Amet_1519 SM00387 Histidine kinase-like ATPases Amet_1519 SM00388 His Kinase A (phosphoacceptor) domain Amet_1534 SM00112 Cadherin repeats. Amet_1545 SM00382 ATPases associated with a variety of cellular activities Amet_1547 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_1551 SM00900 Amet_1551 Amet_1552 SM00422 helix_turn_helix, mercury resistance Amet_1553 SM00382 ATPases associated with a variety of cellular activities Amet_1555 SM00382 ATPases associated with a variety of cellular activities Amet_1559 SM00421 helix_turn_helix, Lux Regulon Amet_1559 SM00448 cheY-homologous receiver domain Amet_1573 SM00267 diguanylate cyclase Amet_1574 SM00530 Helix-turn-helix XRE-family like proteins Amet_1575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_1575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_1580 SM00903 Flavin reductase like domain Amet_1581 SM00530 Helix-turn-helix XRE-family like proteins Amet_1584 SM00421 helix_turn_helix, Lux Regulon Amet_1584 SM00448 cheY-homologous receiver domain Amet_1587 SM00382 ATPases associated with a variety of cellular activities Amet_1597 SM00530 Helix-turn-helix XRE-family like proteins Amet_1602 SM00857 Resolvase, N terminal domain Amet_1609 SM00487 DEAD-like helicases superfamily Amet_1627 SM00357 Cold shock protein domain Amet_1631 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Amet_1632 SM00382 ATPases associated with a variety of cellular activities Amet_1638 SM00967 RNA 2'-O ribose methyltransferase substrate binding Amet_1640 SM00873 B3/4 domain Amet_1640 SM00874 tRNA synthetase B5 domain Amet_1640 SM00896 Ferredoxin-fold anticodon binding domain Amet_1643 SM00529 Helix-turn-helix diphteria tox regulatory element Amet_1644 SM00382 ATPases associated with a variety of cellular activities Amet_1649 SM00450 Rhodanese Homology Domain Amet_1653 SM00382 ATPases associated with a variety of cellular activities Amet_1662 SM00487 DEAD-like helicases superfamily Amet_1662 SM00490 helicase superfamily c-terminal domain Amet_1673 SM00062 Bacterial periplasmic substrate-binding proteins Amet_1675 SM00382 ATPases associated with a variety of cellular activities Amet_1676 SM00890 Domain of unknown function Amet_1680 SM01022 Amet_1680 Amet_1688 SM00382 ATPases associated with a variety of cellular activities Amet_1691 SM00448 cheY-homologous receiver domain Amet_1691 SM00862 Transcriptional regulatory protein, C terminal Amet_1692 SM00387 Histidine kinase-like ATPases Amet_1692 SM00388 His Kinase A (phosphoacceptor) domain Amet_1697 SM00849 Metallo-beta-lactamase superfamily Amet_1700 SM00829 Enoylreductase Amet_1701 SM01264 Amet_1701 Amet_1702 SM01131 Amet_1702 Amet_1704 SM00852 Probable molybdopterin binding domain Amet_1705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_1707 SM00363 S4 RNA-binding domain Amet_1707 SM01390 Amet_1707 Amet_1708 SM01119 Amet_1708 Amet_1710 SM00838 Elongation factor G C-terminus Amet_1712 SM00463 Small MutS-related domain Amet_1712 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Amet_1712 SM00534 ATPase domain of DNA mismatch repair MUTS family Amet_1714 SM00836 DALR anticodon binding domain Amet_1714 SM01016 Arginyl tRNA synthetase N terminal dom Amet_1715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_1722 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_1725 SM00028 Tetratricopeptide repeats Amet_1733 SM00382 ATPases associated with a variety of cellular activities Amet_1737 SM00316 Ribosomal protein S1-like RNA-binding domain Amet_1737 SM00322 K homology RNA-binding domain Amet_1755 SM00327 von Willebrand factor (vWF) type A domain Amet_1766 SM00382 ATPases associated with a variety of cellular activities Amet_1770 SM00448 cheY-homologous receiver domain Amet_1770 SM00862 Transcriptional regulatory protein, C terminal Amet_1771 SM00387 Histidine kinase-like ATPases Amet_1771 SM00388 His Kinase A (phosphoacceptor) domain Amet_1785 SM00487 DEAD-like helicases superfamily Amet_1827 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Amet_1837 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Amet_1841 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Amet_1846 SM00382 ATPases associated with a variety of cellular activities Amet_1861 SM00849 Metallo-beta-lactamase superfamily Amet_1869 SM00465 GIY-YIG type nucleases (URI domain) Amet_1873 SM00347 helix_turn_helix multiple antibiotic resistance protein Amet_1879 SM00382 ATPases associated with a variety of cellular activities Amet_1880 SM00382 ATPases associated with a variety of cellular activities Amet_1886 SM00646 Amet_1886 Amet_1901 SM00530 Helix-turn-helix XRE-family like proteins Amet_1903 SM00382 ATPases associated with a variety of cellular activities Amet_1911 SM00342 helix_turn_helix, arabinose operon control protein Amet_1915 SM00448 cheY-homologous receiver domain Amet_1915 SM00862 Transcriptional regulatory protein, C terminal Amet_1916 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_1916 SM00387 Histidine kinase-like ATPases Amet_1916 SM00388 His Kinase A (phosphoacceptor) domain Amet_1917 SM00448 cheY-homologous receiver domain Amet_1917 SM00862 Transcriptional regulatory protein, C terminal Amet_1918 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_1918 SM00387 Histidine kinase-like ATPases Amet_1918 SM00388 His Kinase A (phosphoacceptor) domain Amet_1919 SM00382 ATPases associated with a variety of cellular activities Amet_1921 SM00530 Helix-turn-helix XRE-family like proteins Amet_1931 SM00966 SpoVT / AbrB like domain Amet_1945 SM00646 Amet_1945 Amet_1951 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Amet_1982 SM00646 Amet_1982 Amet_1992 SM00387 Histidine kinase-like ATPases Amet_1992 SM00388 His Kinase A (phosphoacceptor) domain Amet_1993 SM00448 cheY-homologous receiver domain Amet_1993 SM00862 Transcriptional regulatory protein, C terminal Amet_1998 SM00365 Leucine-rich repeat, SDS22-like subfamily Amet_1998 SM00369 Leucine-rich repeats, typical (most populated) subfamily Amet_2002 SM00382 ATPases associated with a variety of cellular activities Amet_2008 SM00382 ATPases associated with a variety of cellular activities Amet_2009 SM00382 ATPases associated with a variety of cellular activities Amet_2013 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Amet_2038 SM00382 ATPases associated with a variety of cellular activities Amet_2039 SM00382 ATPases associated with a variety of cellular activities Amet_2040 SM00347 helix_turn_helix multiple antibiotic resistance protein Amet_2048 SM00382 ATPases associated with a variety of cellular activities Amet_2049 SM00382 ATPases associated with a variety of cellular activities Amet_2060 SM00382 ATPases associated with a variety of cellular activities Amet_2064 SM00382 ATPases associated with a variety of cellular activities Amet_2065 SM00382 ATPases associated with a variety of cellular activities Amet_2069 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Amet_2069 SM00091 PAS domain Amet_2069 SM00387 Histidine kinase-like ATPases Amet_2069 SM00388 His Kinase A (phosphoacceptor) domain Amet_2069 SM00448 cheY-homologous receiver domain Amet_2072 SM00347 helix_turn_helix multiple antibiotic resistance protein Amet_2077 SM00382 ATPases associated with a variety of cellular activities Amet_2078 SM00382 ATPases associated with a variety of cellular activities Amet_2082 SM00530 Helix-turn-helix XRE-family like proteins Amet_2086 SM01018 B12 binding domain Amet_2093 SM01018 B12 binding domain Amet_2097 SM01018 B12 binding domain Amet_2098 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_2098 SM00866 Amet_2098 Amet_2104 SM00530 Helix-turn-helix XRE-family like proteins Amet_2113 SM00382 ATPases associated with a variety of cellular activities Amet_2116 SM00530 Helix-turn-helix XRE-family like proteins Amet_2119 SM00382 ATPases associated with a variety of cellular activities Amet_2146 SM00487 DEAD-like helicases superfamily Amet_2146 SM00490 helicase superfamily c-terminal domain Amet_2156 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_2162 SM00905 Dihydroneopterin aldolase Amet_2165 SM00093 SERine Proteinase INhibitors Amet_2170 SM00244 prohibitin homologues Amet_2172 SM00267 diguanylate cyclase Amet_2174 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_2175 SM00382 ATPases associated with a variety of cellular activities Amet_2176 SM00382 ATPases associated with a variety of cellular activities Amet_2181 SM00954 Region found in RelA / SpoT proteins Amet_2184 SM00857 Resolvase, N terminal domain Amet_2186 SM00530 Helix-turn-helix XRE-family like proteins Amet_2193 SM00487 DEAD-like helicases superfamily Amet_2203 SM00870 Amet_2203 Amet_2206 SM00981 Amet_2206 Amet_2208 SM00852 Probable molybdopterin binding domain Amet_2213 SM00387 Histidine kinase-like ATPases Amet_2226 SM00567 E-Z type HEAT repeats Amet_2230 SM00881 CoA binding domain Amet_2257 SM00530 Helix-turn-helix XRE-family like proteins Amet_2278 SM00481 DNA polymerase alpha chain like domain Amet_2279 SM00387 Histidine kinase-like ATPases Amet_2282 SM00900 Amet_2282 Amet_2297 SM00851 MGS-like domain Amet_2300 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_2302 SM00316 Ribosomal protein S1-like RNA-binding domain Amet_2308 SM01103 Amet_2308 Amet_2310 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_2319 SM00936 Penicillin-binding protein 5, C-terminal domain Amet_2320 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Amet_2325 SM00448 cheY-homologous receiver domain Amet_2325 SM00862 Transcriptional regulatory protein, C terminal Amet_2326 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_2326 SM00387 Histidine kinase-like ATPases Amet_2326 SM00388 His Kinase A (phosphoacceptor) domain Amet_2327 SM00909 Sporulation and spore germination Amet_2339 SM00382 ATPases associated with a variety of cellular activities Amet_2343 SM01323 Amet_2343 Amet_2353 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_2353 SM00954 Region found in RelA / SpoT proteins Amet_2355 SM00849 Metallo-beta-lactamase superfamily Amet_2357 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_2366 SM00091 PAS domain Amet_2366 SM00382 ATPases associated with a variety of cellular activities Amet_2377 SM00857 Resolvase, N terminal domain Amet_2382 SM00382 ATPases associated with a variety of cellular activities Amet_2389 SM00530 Helix-turn-helix XRE-family like proteins Amet_2424 SM00507 HNH nucleases Amet_2438 SM00646 Amet_2438 Amet_2446 SM00382 ATPases associated with a variety of cellular activities Amet_2458 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Amet_2462 SM00732 Likely ribonuclease with RNase H fold. Amet_2467 SM00849 Metallo-beta-lactamase superfamily Amet_2475 SM00857 Resolvase, N terminal domain Amet_2490 SM00841 Elongation factor P, C-terminal Amet_2490 SM01185 Amet_2490 Amet_2492 SM00382 ATPases associated with a variety of cellular activities Amet_2508 SM00861 Transketolase, pyrimidine binding domain Amet_2509 SM00363 S4 RNA-binding domain Amet_2513 SM00448 cheY-homologous receiver domain Amet_2514 SM00479 Amet_2514 Amet_2527 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Amet_2528 SM00936 Penicillin-binding protein 5, C-terminal domain Amet_2529 SM00116 Domain in cystathionine beta-synthase and other proteins. Amet_2540 SM00382 ATPases associated with a variety of cellular activities Amet_2543 SM00853 MutL C terminal dimerisation domain Amet_2543 SM01340 Amet_2543 Amet_2544 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Amet_2544 SM00534 ATPase domain of DNA mismatch repair MUTS family Amet_2545 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_2548 SM00644 Amet_2548 Amet_2563 SM00257 Lysin motif Amet_2582 SM00470 ParB-like nuclease domain Amet_2603 SM00849 Metallo-beta-lactamase superfamily Amet_2612 SM00530 Helix-turn-helix XRE-family like proteins Amet_2613 SM00530 Helix-turn-helix XRE-family like proteins Amet_2616 SM00857 Resolvase, N terminal domain Amet_2619 SM00422 helix_turn_helix, mercury resistance Amet_2623 SM00138 Methyltransferase, chemotaxis proteins Amet_2624 SM00316 Ribosomal protein S1-like RNA-binding domain Amet_2626 SM00563 Phosphate acyltransferases Amet_2630 SM00855 Phosphoglycerate mutase family Amet_2640 SM00363 S4 RNA-binding domain Amet_2643 SM00936 Penicillin-binding protein 5, C-terminal domain Amet_2647 SM00530 Helix-turn-helix XRE-family like proteins Amet_2652 SM00998 Adenylosuccinate lyase C-terminus Amet_2655 SM00481 DNA polymerase alpha chain like domain Amet_2657 SM00322 K homology RNA-binding domain Amet_2657 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_2658 SM00382 ATPases associated with a variety of cellular activities Amet_2660 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_2661 SM00450 Rhodanese Homology Domain Amet_2662 SM00382 ATPases associated with a variety of cellular activities Amet_2662 SM00843 Amet_2662 Amet_2667 SM00316 Ribosomal protein S1-like RNA-binding domain Amet_2667 SM00322 K homology RNA-binding domain Amet_2668 SM01387 Amet_2668 Amet_2669 SM00904 Riboflavin kinase Amet_2676 SM00316 Ribosomal protein S1-like RNA-binding domain Amet_2676 SM00322 K homology RNA-binding domain Amet_2678 SM00479 Amet_2678 Amet_2678 SM00481 DNA polymerase alpha chain like domain Amet_2681 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Amet_2693 SM01245 Amet_2693 Amet_2697 SM00260 Two component signalling adaptor domain Amet_2698 SM00073 Histidine Phosphotransfer domain Amet_2698 SM00260 Two component signalling adaptor domain Amet_2698 SM00387 Histidine kinase-like ATPases Amet_2698 SM01231 Amet_2698 Amet_2699 SM00448 cheY-homologous receiver domain Amet_2702 SM00382 ATPases associated with a variety of cellular activities Amet_2702 SM00962 SRP54-type protein, GTPase domain Amet_2709 SM00448 cheY-homologous receiver domain Amet_2722 SM00382 ATPases associated with a variety of cellular activities Amet_2729 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Amet_2729 SM00387 Histidine kinase-like ATPases Amet_2732 SM00260 Two component signalling adaptor domain Amet_2732 SM00448 cheY-homologous receiver domain Amet_2733 SM00448 cheY-homologous receiver domain Amet_2735 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Amet_2735 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Amet_2735 SM00493 Amet_2735 Amet_2737 SM00382 ATPases associated with a variety of cellular activities Amet_2747 SM00382 ATPases associated with a variety of cellular activities Amet_2747 SM00962 SRP54-type protein, GTPase domain Amet_2747 SM00963 SRP54-type protein, helical bundle domain Amet_2749 SM00382 ATPases associated with a variety of cellular activities Amet_2749 SM00962 SRP54-type protein, GTPase domain Amet_2749 SM00963 SRP54-type protein, helical bundle domain Amet_2750 SM00968 SMC proteins Flexible Hinge Domain Amet_2751 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_2752 SM00358 Double-stranded RNA binding motif Amet_2752 SM00535 Ribonuclease III family Amet_2753 SM00825 Beta-ketoacyl synthase Amet_2755 SM00822 Amet_2755 Amet_2756 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Amet_2770 SM00487 DEAD-like helicases superfamily Amet_2770 SM00490 helicase superfamily c-terminal domain Amet_2771 SM01120 Amet_2771 Amet_2771 SM01121 Amet_2771 Amet_2776 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain Amet_2779 SM00220 Serine/Threonine protein kinases, catalytic domain Amet_2779 SM00740 Amet_2779 Amet_2780 SM00331 Sigma factor PP2C-like phosphatases Amet_2780 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Amet_2787 SM00487 DEAD-like helicases superfamily Amet_2787 SM00490 helicase superfamily c-terminal domain Amet_2789 SM01409 Amet_2789 Amet_2790 SM00072 Guanylate kinase homologues. Amet_2796 SM00363 S4 RNA-binding domain Amet_2801 SM00363 S4 RNA-binding domain Amet_2808 SM00116 Domain in cystathionine beta-synthase and other proteins. Amet_2808 SM00382 ATPases associated with a variety of cellular activities Amet_2813 SM00382 ATPases associated with a variety of cellular activities Amet_2816 SM00342 helix_turn_helix, arabinose operon control protein Amet_2816 SM00448 cheY-homologous receiver domain Amet_2817 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_2819 SM00028 Tetratricopeptide repeats Amet_2819 SM00671 Sel1-like repeats. Amet_2822 SM00382 ATPases associated with a variety of cellular activities Amet_2822 SM01086 C-terminal, D2-small domain, of ClpB protein Amet_2825 SM00257 Lysin motif Amet_2845 SM00382 ATPases associated with a variety of cellular activities Amet_2856 SM01207 Amet_2856 Amet_2865 SM00091 PAS domain Amet_2865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_2865 SM00387 Histidine kinase-like ATPases Amet_2865 SM00388 His Kinase A (phosphoacceptor) domain Amet_2866 SM00448 cheY-homologous receiver domain Amet_2866 SM00862 Transcriptional regulatory protein, C terminal Amet_2873 SM00864 Tubulin/FtsZ family, GTPase domain Amet_2873 SM00865 Tubulin/FtsZ family, C-terminal domain Amet_2885 SM00740 Amet_2885 Amet_2897 SM01133 Amet_2897 Amet_2899 SM00331 Sigma factor PP2C-like phosphatases Amet_2905 SM00382 ATPases associated with a variety of cellular activities Amet_2906 SM00382 ATPases associated with a variety of cellular activities Amet_2911 SM00382 ATPases associated with a variety of cellular activities Amet_2912 SM00382 ATPases associated with a variety of cellular activities Amet_2925 SM00052 Putative diguanylate phosphodiesterase Amet_2925 SM00091 PAS domain Amet_2925 SM00267 diguanylate cyclase Amet_2926 SM00052 Putative diguanylate phosphodiesterase Amet_2926 SM00267 diguanylate cyclase Amet_2931 SM00422 helix_turn_helix, mercury resistance Amet_2934 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_2934 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_2935 SM00245 tail specific protease Amet_2938 SM00849 Metallo-beta-lactamase superfamily Amet_2943 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_2943 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_2944 SM00642 Alpha-amylase domain Amet_2949 SM00642 Alpha-amylase domain Amet_2952 SM00487 DEAD-like helicases superfamily Amet_2952 SM00490 helicase superfamily c-terminal domain Amet_2958 SM00764 Citrate lyase ligase C-terminal domain Amet_2960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_2965 SM00919 Malic enzyme, NAD binding domain Amet_2965 SM01274 Amet_2965 Amet_2966 SM00448 cheY-homologous receiver domain Amet_2967 SM00091 PAS domain Amet_2967 SM00387 Histidine kinase-like ATPases Amet_2969 SM00052 Putative diguanylate phosphodiesterase Amet_2973 SM00797 Allophanate hydrolase subunit 2 Amet_2974 SM00796 Allophanate hydrolase subunit 1 Amet_2978 SM00382 ATPases associated with a variety of cellular activities Amet_2978 SM00448 cheY-homologous receiver domain Amet_2979 SM00091 PAS domain Amet_2979 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_2979 SM00387 Histidine kinase-like ATPases Amet_2979 SM00388 His Kinase A (phosphoacceptor) domain Amet_2994 SM00400 zinc finger Amet_2994 SM00493 Amet_2994 Amet_2996 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_2999 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_3000 SM00900 Amet_3000 Amet_3001 SM00448 cheY-homologous receiver domain Amet_3001 SM00862 Transcriptional regulatory protein, C terminal Amet_3002 SM00387 Histidine kinase-like ATPases Amet_3009 SM00900 Amet_3009 Amet_3013 SM00363 S4 RNA-binding domain Amet_3013 SM01390 Amet_3013 Amet_3021 SM00116 Domain in cystathionine beta-synthase and other proteins. Amet_3030 SM00014 Acid phosphatase homologues Amet_3032 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_3044 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_3047 SM00271 DnaJ molecular chaperone homology domain Amet_3051 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_3052 SM00838 Elongation factor G C-terminus Amet_3060 SM00849 Metallo-beta-lactamase superfamily Amet_3061 SM00028 Tetratricopeptide repeats Amet_3062 SM00849 Metallo-beta-lactamase superfamily Amet_3070 SM00382 ATPases associated with a variety of cellular activities Amet_3073 SM00487 DEAD-like helicases superfamily Amet_3073 SM00490 helicase superfamily c-terminal domain Amet_3079 SM00382 ATPases associated with a variety of cellular activities Amet_3086 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_3086 SM00387 Histidine kinase-like ATPases Amet_3086 SM00388 His Kinase A (phosphoacceptor) domain Amet_3087 SM00448 cheY-homologous receiver domain Amet_3087 SM00862 Transcriptional regulatory protein, C terminal Amet_3089 SM00893 Electron transfer flavoprotein domain Amet_3090 SM00893 Electron transfer flavoprotein domain Amet_3095 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Amet_3096 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Amet_3103 SM00244 prohibitin homologues Amet_3104 SM00244 prohibitin homologues Amet_3106 SM00434 DNA Topoisomerase IV Amet_3107 SM00433 TopoisomeraseII Amet_3117 SM00849 Metallo-beta-lactamase superfamily Amet_3125 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Amet_3125 SM00474 3'-5' exonuclease Amet_3125 SM00475 5'-3' exonuclease Amet_3125 SM00482 DNA polymerase A domain Amet_3133 SM00530 Helix-turn-helix XRE-family like proteins Amet_3141 SM00421 helix_turn_helix, Lux Regulon Amet_3141 SM00448 cheY-homologous receiver domain Amet_3142 SM00387 Histidine kinase-like ATPases Amet_3144 SM00260 Two component signalling adaptor domain Amet_3151 SM00347 helix_turn_helix multiple antibiotic resistance protein Amet_3154 SM00046 Diacylglycerol kinase catalytic domain (presumed) Amet_3155 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_3157 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Amet_3159 SM00382 ATPases associated with a variety of cellular activities Amet_3160 SM00382 ATPases associated with a variety of cellular activities Amet_3164 SM00267 diguanylate cyclase Amet_3166 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Amet_3166 SM00481 DNA polymerase alpha chain like domain Amet_3166 SM00483 DNA polymerase X family Amet_3168 SM00852 Probable molybdopterin binding domain Amet_3169 SM00852 Probable molybdopterin binding domain Amet_3170 SM00382 ATPases associated with a variety of cellular activities Amet_3176 SM00448 cheY-homologous receiver domain Amet_3184 SM00938 Nitrogen regulatory protein P-II Amet_3187 SM00900 Amet_3187 Amet_3197 SM01130 Amet_3197 Amet_3198 SM00859 Semialdehyde dehydrogenase, NAD binding domain Amet_3199 SM00257 Lysin motif Amet_3208 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_3208 SM00387 Histidine kinase-like ATPases Amet_3208 SM00388 His Kinase A (phosphoacceptor) domain Amet_3209 SM00448 cheY-homologous receiver domain Amet_3209 SM00862 Transcriptional regulatory protein, C terminal Amet_3221 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_3227 SM00448 cheY-homologous receiver domain Amet_3228 SM00387 Histidine kinase-like ATPases Amet_3228 SM00388 His Kinase A (phosphoacceptor) domain Amet_3229 SM00919 Malic enzyme, NAD binding domain Amet_3229 SM01274 Amet_3229 Amet_3232 SM00387 Histidine kinase-like ATPases Amet_3235 SM00450 Rhodanese Homology Domain Amet_3241 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_3241 SM00876 Biotin and Thiamin Synthesis associated domain Amet_3242 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_3246 SM00116 Domain in cystathionine beta-synthase and other proteins. Amet_3246 SM00924 MgtE intracellular N domain Amet_3249 SM00052 Putative diguanylate phosphodiesterase Amet_3249 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Amet_3249 SM00091 PAS domain Amet_3249 SM00267 diguanylate cyclase Amet_3255 SM00382 ATPases associated with a variety of cellular activities Amet_3255 SM00448 cheY-homologous receiver domain Amet_3256 SM00387 Histidine kinase-like ATPases Amet_3256 SM00388 His Kinase A (phosphoacceptor) domain Amet_3258 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_3258 SM00387 Histidine kinase-like ATPases Amet_3258 SM00388 His Kinase A (phosphoacceptor) domain Amet_3259 SM00448 cheY-homologous receiver domain Amet_3259 SM00862 Transcriptional regulatory protein, C terminal Amet_3280 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_3286 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_3290 SM00450 Rhodanese Homology Domain Amet_3291 SM00450 Rhodanese Homology Domain Amet_3292 SM00382 ATPases associated with a variety of cellular activities Amet_3299 SM00450 Rhodanese Homology Domain Amet_3307 SM00448 cheY-homologous receiver domain Amet_3307 SM00862 Transcriptional regulatory protein, C terminal Amet_3308 SM00387 Histidine kinase-like ATPases Amet_3308 SM00388 His Kinase A (phosphoacceptor) domain Amet_3321 SM00342 helix_turn_helix, arabinose operon control protein Amet_3321 SM00448 cheY-homologous receiver domain Amet_3323 SM00382 ATPases associated with a variety of cellular activities Amet_3327 SM00382 ATPases associated with a variety of cellular activities Amet_3328 SM00382 ATPases associated with a variety of cellular activities Amet_3336 SM00382 ATPases associated with a variety of cellular activities Amet_3344 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Amet_3345 SM01092 CO dehydrogenase flavoprotein C-terminal domain Amet_3348 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Amet_3348 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Amet_3348 SM00493 Amet_3348 Amet_3350 SM00487 DEAD-like helicases superfamily Amet_3350 SM00490 helicase superfamily c-terminal domain Amet_3360 SM00857 Resolvase, N terminal domain Amet_3364 SM00966 SpoVT / AbrB like domain Amet_3370 SM00530 Helix-turn-helix XRE-family like proteins Amet_3371 SM00382 ATPases associated with a variety of cellular activities Amet_3372 SM00382 ATPases associated with a variety of cellular activities Amet_3373 SM01018 B12 binding domain Amet_3378 SM00851 MGS-like domain Amet_3378 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Amet_3379 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Amet_3383 SM00859 Semialdehyde dehydrogenase, NAD binding domain Amet_3385 SM00448 cheY-homologous receiver domain Amet_3385 SM01012 Amet_3385 Amet_3386 SM01230 Amet_3386 Amet_3387 SM00845 GatB domain Amet_3391 SM00938 Nitrogen regulatory protein P-II Amet_3393 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Amet_3395 SM01321 Amet_3395 Amet_3417 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_3439 SM00984 UDP binding domain Amet_3455 SM01329 Amet_3455 Amet_3458 SM00917 LeuA allosteric (dimerisation) domain Amet_3460 SM00900 Amet_3460 Amet_3469 SM01350 Amet_3469 Amet_3474 SM00842 Cell division protein FtsA Amet_3481 SM00382 ATPases associated with a variety of cellular activities Amet_3482 SM00382 ATPases associated with a variety of cellular activities Amet_3483 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Amet_3483 SM00091 PAS domain Amet_3483 SM00267 diguanylate cyclase Amet_3483 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_3484 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_3485 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_3487 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_3500 SM00232 JAB/MPN domain Amet_3514 SM00478 endonuclease III Amet_3517 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_3522 SM00938 Nitrogen regulatory protein P-II Amet_3523 SM00938 Nitrogen regulatory protein P-II Amet_3535 SM00342 helix_turn_helix, arabinose operon control protein Amet_3535 SM00448 cheY-homologous receiver domain Amet_3536 SM00387 Histidine kinase-like ATPases Amet_3537 SM01068 Putative carbohydrate binding domain Amet_3545 SM00481 DNA polymerase alpha chain like domain Amet_3552 SM00382 ATPases associated with a variety of cellular activities Amet_3554 SM00382 ATPases associated with a variety of cellular activities Amet_3555 SM00387 Histidine kinase-like ATPases Amet_3556 SM00448 cheY-homologous receiver domain Amet_3556 SM00862 Transcriptional regulatory protein, C terminal Amet_3560 SM00382 ATPases associated with a variety of cellular activities Amet_3563 SM00448 cheY-homologous receiver domain Amet_3563 SM00850 LytTr DNA-binding domain Amet_3567 SM00387 Histidine kinase-like ATPases Amet_3568 SM00387 Histidine kinase-like ATPases Amet_3572 SM00316 Ribosomal protein S1-like RNA-binding domain Amet_3572 SM00357 Cold shock protein domain Amet_3572 SM00955 Amet_3572 Amet_3576 SM01192 Amet_3576 Amet_3576 SM01193 Amet_3576 Amet_3580 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Amet_3585 SM00382 ATPases associated with a variety of cellular activities Amet_3610 SM00257 Lysin motif Amet_3617 SM00382 ATPases associated with a variety of cellular activities Amet_3620 SM00855 Phosphoglycerate mutase family Amet_3626 SM01208 Amet_3626 Amet_3627 SM00842 Cell division protein FtsA Amet_3628 SM00478 endonuclease III Amet_3628 SM00525 Amet_3628 Amet_3644 SM00116 Domain in cystathionine beta-synthase and other proteins. Amet_3659 SM00382 ATPases associated with a variety of cellular activities Amet_3661 SM00062 Bacterial periplasmic substrate-binding proteins Amet_3662 SM00287 Bacterial SH3 domain homologues Amet_3672 SM00363 S4 RNA-binding domain Amet_3678 SM00954 Region found in RelA / SpoT proteins Amet_3679 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Amet_3682 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_3685 SM00636 Amet_3685 Amet_3686 SM00257 Lysin motif Amet_3698 SM00028 Tetratricopeptide repeats Amet_3698 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Amet_3698 SM00267 diguanylate cyclase Amet_3700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_3711 SM00387 Histidine kinase-like ATPases Amet_3711 SM00388 His Kinase A (phosphoacceptor) domain Amet_3712 SM00448 cheY-homologous receiver domain Amet_3712 SM00862 Transcriptional regulatory protein, C terminal Amet_3715 SM00421 helix_turn_helix, Lux Regulon Amet_3715 SM00448 cheY-homologous receiver domain Amet_3719 SM00382 ATPases associated with a variety of cellular activities Amet_3722 SM00100 Cyclic nucleotide-monophosphate binding domain Amet_3722 SM00419 helix_turn_helix, cAMP Regulatory protein Amet_3723 SM00849 Metallo-beta-lactamase superfamily Amet_3731 SM00481 DNA polymerase alpha chain like domain Amet_3748 SM00893 Electron transfer flavoprotein domain Amet_3749 SM00893 Electron transfer flavoprotein domain Amet_3750 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_3750 SM00895 Amet_3750 Amet_3752 SM00704 CDGSH-type zinc finger. Function unknown. Amet_3753 SM00062 Bacterial periplasmic substrate-binding proteins Amet_3753 SM00267 diguanylate cyclase Amet_3753 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_3754 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_3755 SM00487 DEAD-like helicases superfamily Amet_3755 SM00490 helicase superfamily c-terminal domain Amet_3758 SM01007 Class II Aldolase and Adducin N-terminal domain Amet_3759 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_3760 SM00260 Two component signalling adaptor domain Amet_3762 SM00382 ATPases associated with a variety of cellular activities Amet_3766 SM00382 ATPases associated with a variety of cellular activities Amet_3766 SM00989 Amet_3766 Amet_3769 SM00491 Amet_3769 Amet_3771 SM00382 ATPases associated with a variety of cellular activities Amet_3775 SM00342 helix_turn_helix, arabinose operon control protein Amet_3777 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_3779 SM00957 SecA DEAD-like domain Amet_3779 SM00958 SecA preprotein cross-linking domain Amet_3789 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_3789 SM00895 Amet_3789 Amet_3791 SM00487 DEAD-like helicases superfamily Amet_3791 SM00490 helicase superfamily c-terminal domain Amet_3793 SM01321 Amet_3793 Amet_3798 SM00382 ATPases associated with a variety of cellular activities Amet_3804 SM00448 cheY-homologous receiver domain Amet_3804 SM01043 Bacterial transcriptional activator domain Amet_3807 SM00382 ATPases associated with a variety of cellular activities Amet_3808 SM00382 ATPases associated with a variety of cellular activities Amet_3809 SM00342 helix_turn_helix, arabinose operon control protein Amet_3817 SM01321 Amet_3817 Amet_3821 SM01321 Amet_3821 Amet_3822 SM00877 Amet_3822 Amet_3825 SM00877 Amet_3825 Amet_3827 SM00877 Amet_3827 Amet_3830 SM00877 Amet_3830 Amet_3834 SM00877 Amet_3834 Amet_3837 SM00877 Amet_3837 Amet_3838 SM00877 Amet_3838 Amet_3844 SM00342 helix_turn_helix, arabinose operon control protein Amet_3844 SM00448 cheY-homologous receiver domain Amet_3846 SM00342 helix_turn_helix, arabinose operon control protein Amet_3846 SM00871 Bacterial transcription activator, effector binding domain Amet_3852 SM00849 Metallo-beta-lactamase superfamily Amet_3854 SM00382 ATPases associated with a variety of cellular activities Amet_3859 SM00900 Amet_3859 Amet_3868 SM00388 His Kinase A (phosphoacceptor) domain Amet_3881 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_3894 SM00382 ATPases associated with a variety of cellular activities Amet_3894 SM00930 Amet_3894 Amet_3905 SM00382 ATPases associated with a variety of cellular activities Amet_3909 SM00347 helix_turn_helix multiple antibiotic resistance protein Amet_3916 SM00871 Bacterial transcription activator, effector binding domain Amet_3923 SM00342 helix_turn_helix, arabinose operon control protein Amet_3935 SM00422 helix_turn_helix, mercury resistance Amet_3937 SM00382 ATPases associated with a variety of cellular activities Amet_3941 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_3942 SM00382 ATPases associated with a variety of cellular activities Amet_3954 SM00382 ATPases associated with a variety of cellular activities Amet_3955 SM00387 Histidine kinase-like ATPases Amet_3955 SM00388 His Kinase A (phosphoacceptor) domain Amet_3956 SM00448 cheY-homologous receiver domain Amet_3956 SM00862 Transcriptional regulatory protein, C terminal Amet_3962 SM00220 Serine/Threonine protein kinases, catalytic domain Amet_3971 SM00382 ATPases associated with a variety of cellular activities Amet_3993 SM00470 ParB-like nuclease domain Amet_3999 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Amet_4004 SM00530 Helix-turn-helix XRE-family like proteins Amet_4005 SM00857 Resolvase, N terminal domain Amet_4007 SM00857 Resolvase, N terminal domain Amet_4009 SM00482 DNA polymerase A domain Amet_4015 SM00644 Amet_4015 Amet_4039 SM00470 ParB-like nuclease domain Amet_4042 SM00507 HNH nucleases Amet_4048 SM00990 Amet_4048 Amet_4056 SM00487 DEAD-like helicases superfamily Amet_4061 SM00909 Sporulation and spore germination Amet_4066 SM00331 Sigma factor PP2C-like phosphatases Amet_4067 SM00091 PAS domain Amet_4071 SM00481 DNA polymerase alpha chain like domain Amet_4072 SM00028 Tetratricopeptide repeats Amet_4072 SM01043 Bacterial transcriptional activator domain Amet_4073 SM01221 Amet_4073 Amet_4073 SM01222 Amet_4073 Amet_4080 SM00382 ATPases associated with a variety of cellular activities Amet_4083 SM00793 Accessory gene regulator B Amet_4086 SM00387 Histidine kinase-like ATPases Amet_4087 SM00448 cheY-homologous receiver domain Amet_4087 SM00850 LytTr DNA-binding domain Amet_4096 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_4099 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Amet_4099 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Amet_4100 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Amet_4103 SM00173 Ras subfamily of RAS small GTPases Amet_4104 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_4104 SM00876 Biotin and Thiamin Synthesis associated domain Amet_4105 SM00876 Biotin and Thiamin Synthesis associated domain Amet_4107 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Amet_4108 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Amet_4111 SM00382 ATPases associated with a variety of cellular activities Amet_4113 SM01120 Amet_4113 Amet_4115 SM00382 ATPases associated with a variety of cellular activities Amet_4116 SM00382 ATPases associated with a variety of cellular activities Amet_4124 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Amet_4124 SM00465 GIY-YIG type nucleases (URI domain) Amet_4126 SM00382 ATPases associated with a variety of cellular activities Amet_4127 SM00487 DEAD-like helicases superfamily Amet_4127 SM00490 helicase superfamily c-terminal domain Amet_4128 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Amet_4128 SM00245 tail specific protease Amet_4131 SM00382 ATPases associated with a variety of cellular activities Amet_4134 SM00257 Lysin motif Amet_4145 SM01005 Alanine racemase, C-terminal domain Amet_4164 SM00382 ATPases associated with a variety of cellular activities Amet_4166 SM00116 Domain in cystathionine beta-synthase and other proteins. Amet_4172 SM00382 ATPases associated with a variety of cellular activities Amet_4179 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_4197 SM00382 ATPases associated with a variety of cellular activities Amet_4202 SM00421 helix_turn_helix, Lux Regulon Amet_4202 SM00448 cheY-homologous receiver domain Amet_4206 SM00382 ATPases associated with a variety of cellular activities Amet_4210 SM00851 MGS-like domain Amet_4210 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Amet_4211 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Amet_4212 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Amet_4219 SM00422 helix_turn_helix, mercury resistance Amet_4220 SM00487 DEAD-like helicases superfamily Amet_4220 SM00488 Amet_4220 Amet_4220 SM00491 Amet_4220 Amet_4234 SM00876 Biotin and Thiamin Synthesis associated domain Amet_4245 SM00091 PAS domain Amet_4245 SM00382 ATPases associated with a variety of cellular activities Amet_4246 SM00882 Coenzyme A transferase Amet_4247 SM00882 Coenzyme A transferase Amet_4248 SM00382 ATPases associated with a variety of cellular activities Amet_4252 SM00257 Lysin motif Amet_4255 SM00986 Uracil DNA glycosylase superfamily Amet_4255 SM00987 UreE urease accessory protein, C-terminal domain Amet_4274 SM01329 Amet_4274 Amet_4288 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Amet_4291 SM00857 Resolvase, N terminal domain Amet_4311 SM00091 PAS domain Amet_4311 SM00382 ATPases associated with a variety of cellular activities Amet_4323 SM00387 Histidine kinase-like ATPases Amet_4323 SM00388 His Kinase A (phosphoacceptor) domain Amet_4327 SM00478 endonuclease III Amet_4367 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Amet_4374 SM00646 Amet_4374 Amet_4389 SM00966 SpoVT / AbrB like domain Amet_4400 SM00530 Helix-turn-helix XRE-family like proteins Amet_4406 SM01091 Transporter associated domain Amet_4407 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Amet_4407 SM00091 PAS domain Amet_4407 SM00387 Histidine kinase-like ATPases Amet_4407 SM00388 His Kinase A (phosphoacceptor) domain Amet_4411 SM00387 Histidine kinase-like ATPases Amet_4411 SM00388 His Kinase A (phosphoacceptor) domain Amet_4420 SM00267 diguanylate cyclase Amet_4423 SM00422 helix_turn_helix, mercury resistance Amet_4423 SM00871 Bacterial transcription activator, effector binding domain Amet_4425 SM00729 Elongator protein 3, MiaB family, Radical SAM Amet_4433 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Amet_4433 SM00091 PAS domain Amet_4433 SM00387 Histidine kinase-like ATPases Amet_4433 SM00388 His Kinase A (phosphoacceptor) domain Amet_4440 SM00646 Amet_4440 Amet_4446 SM00382 ATPases associated with a variety of cellular activities Amet_4447 SM00382 ATPases associated with a variety of cellular activities Amet_4449 SM00662 RNA polymerases D Amet_4450 SM00363 S4 RNA-binding domain Amet_4450 SM01390 Amet_4450 Amet_4454 SM00316 Ribosomal protein S1-like RNA-binding domain Amet_4467 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Amet_4468 SM01374 Amet_4468 Amet_4472 SM00322 K homology RNA-binding domain Amet_4475 SM01382 Amet_4475 Amet_4475 SM01383 Amet_4475 Amet_4479 SM01403 Amet_4479 Amet_4481 SM00838 Elongation factor G C-terminus Amet_4481 SM00889 Elongation factor G, domain IV Amet_4485 SM00663 RNA polymerase I subunit A N-terminus Amet_4490 SM00649 Ribosomal protein L11/L12 Amet_4491 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Amet_4491 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Amet_4497 SM00967 RNA 2'-O ribose methyltransferase substrate binding Amet_4501 SM00840 Amet_4501 Amet_4507 SM00670 Large family of predicted nucleotide-binding domains Amet_4508 SM01058 CarD-like/TRCF domain Amet_4511 SM00382 ATPases associated with a variety of cellular activities Amet_4512 SM00382 ATPases associated with a variety of cellular activities Amet_4512 SM01086 C-terminal, D2-small domain, of ClpB protein Amet_4515 SM00838 Elongation factor G C-terminus Amet_4515 SM00889 Elongation factor G, domain IV Amet_4530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_4532 SM00882 Coenzyme A transferase Amet_4533 SM00091 PAS domain Amet_4533 SM00382 ATPases associated with a variety of cellular activities Amet_4540 SM00382 ATPases associated with a variety of cellular activities Amet_4543 SM00382 ATPases associated with a variety of cellular activities Amet_4544 SM00977 TilS substrate C-terminal domain Amet_4545 SM00220 Serine/Threonine protein kinases, catalytic domain Amet_4550 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Amet_4550 SM00534 ATPase domain of DNA mismatch repair MUTS family Amet_4554 SM00091 PAS domain Amet_4554 SM00382 ATPases associated with a variety of cellular activities Amet_4555 SM00981 Amet_4555 Amet_4569 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Amet_4571 SM01092 CO dehydrogenase flavoprotein C-terminal domain Amet_4577 SM00877 Amet_4577 Amet_4578 SM00877 Amet_4578 Amet_4580 SM00877 Amet_4580 Amet_4586 SM01221 Amet_4586 Amet_4586 SM01222 Amet_4586 Amet_4603 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_4603 SM00895 Amet_4603 Amet_4605 SM00257 Lysin motif Amet_4611 SM00646 Amet_4611 Amet_4612 SM00347 helix_turn_helix multiple antibiotic resistance protein Amet_4619 SM00900 Amet_4619 Amet_4621 SM00382 ATPases associated with a variety of cellular activities Amet_4625 SM00849 Metallo-beta-lactamase superfamily Amet_4627 SM00382 ATPases associated with a variety of cellular activities Amet_4631 SM00822 Amet_4631 Amet_4638 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_4638 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_4643 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Amet_4644 SM00382 ATPases associated with a variety of cellular activities Amet_4646 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Amet_4648 SM00861 Transketolase, pyrimidine binding domain Amet_4655 SM00155 Phospholipase D. Active site motifs. Amet_4657 SM00890 Domain of unknown function Amet_4658 SM00382 ATPases associated with a variety of cellular activities Amet_4666 SM00091 PAS domain Amet_4666 SM00382 ATPases associated with a variety of cellular activities Amet_4670 SM00382 ATPases associated with a variety of cellular activities Amet_4672 SM00534 ATPase domain of DNA mismatch repair MUTS family Amet_4675 SM00342 helix_turn_helix, arabinose operon control protein Amet_4685 SM00382 ATPases associated with a variety of cellular activities Amet_4695 SM00341 Helicase and RNase D C-terminal Amet_4695 SM00487 DEAD-like helicases superfamily Amet_4695 SM00490 helicase superfamily c-terminal domain Amet_4695 SM00956 Amet_4695 Amet_4698 SM00363 S4 RNA-binding domain Amet_4699 SM00487 DEAD-like helicases superfamily Amet_4699 SM00490 helicase superfamily c-terminal domain Amet_4706 SM00450 Rhodanese Homology Domain Amet_4717 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Amet_4718 SM00382 ATPases associated with a variety of cellular activities Amet_4719 SM00382 ATPases associated with a variety of cellular activities Amet_4724 SM00014 Acid phosphatase homologues Amet_4727 SM00345 helix_turn_helix gluconate operon transcriptional repressor Amet_4729 SM00448 cheY-homologous receiver domain Amet_4729 SM00862 Transcriptional regulatory protein, C terminal Amet_4730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_4730 SM00387 Histidine kinase-like ATPases Amet_4730 SM00388 His Kinase A (phosphoacceptor) domain Amet_4738 SM00382 ATPases associated with a variety of cellular activities Amet_4744 SM00382 ATPases associated with a variety of cellular activities Amet_4746 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_4746 SM00387 Histidine kinase-like ATPases Amet_4746 SM00388 His Kinase A (phosphoacceptor) domain Amet_4747 SM00448 cheY-homologous receiver domain Amet_4747 SM00862 Transcriptional regulatory protein, C terminal Amet_4751 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Amet_4752 SM00849 Metallo-beta-lactamase superfamily Amet_4757 SM00091 PAS domain Amet_4757 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Amet_4757 SM00387 Histidine kinase-like ATPases Amet_4757 SM00388 His Kinase A (phosphoacceptor) domain Amet_4758 SM00448 cheY-homologous receiver domain Amet_4758 SM00862 Transcriptional regulatory protein, C terminal Amet_4761 SM00257 Lysin motif Amet_4761 SM01208 Amet_4761 Amet_4764 SM00382 ATPases associated with a variety of cellular activities Amet_4765 SM00788 Adenylosuccinate synthetase Amet_4776 SM00670 Large family of predicted nucleotide-binding domains Amet_4779 SM00493 Amet_4779 Amet_4781 SM00382 ATPases associated with a variety of cellular activities Amet_4787 SM00046 Diacylglycerol kinase catalytic domain (presumed) Amet_4791 SM00470 ParB-like nuclease domain Amet_4794 SM00470 ParB-like nuclease domain Amet_4796 SM01228 Amet_4796 Amet_4798 SM00393 Putative single-stranded nucleic acids-binding domain Amet_4798 SM01245 Amet_4798 Amet_4800 SM01234 Amet_4800